##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM385950v1 #!genome-build-accession NCBI_Assembly:GCF_003859505.1 #!annotation-date 09/27/2025 09:51:27 #!annotation-source NCBI RefSeq GCF_003859505.1-RS_2025_09_27 ##sequence-region NZ_QYTJ01000001.1 1 66054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000001.1 RefSeq region 1 66054 . + . ID=NZ_QYTJ01000001.1:1..66054;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000001.1 RefSeq gene 1 462 . + . ID=gene-D5F92_RS00005;Name=D5F92_RS00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS00005;old_locus_tag=D5F92_00005;partial=true;start_range=.,1 NZ_QYTJ01000001.1 cmsearch rRNA 1 462 . + . ID=rna-D5F92_RS00005;Parent=gene-D5F92_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000001.1 cmsearch exon 1 462 . + . ID=exon-D5F92_RS00005-1;Parent=rna-D5F92_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000001.1 RefSeq gene 537 652 . + . ID=gene-D5F92_RS00010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS00010;old_locus_tag=D5F92_00010 NZ_QYTJ01000001.1 cmsearch rRNA 537 652 . + . ID=rna-D5F92_RS00010;Parent=gene-D5F92_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00010;product=5S ribosomal RNA NZ_QYTJ01000001.1 cmsearch exon 537 652 . + . ID=exon-D5F92_RS00010-1;Parent=rna-D5F92_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00010;product=5S ribosomal RNA NZ_QYTJ01000001.1 RefSeq gene 656 728 . + . ID=gene-D5F92_RS00015;Name=D5F92_RS00015;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00015;old_locus_tag=D5F92_00015 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 656 728 . + . ID=rna-D5F92_RS00015;Parent=gene-D5F92_RS00015;anticodon=(pos:689..691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00015;product=tRNA-Val NZ_QYTJ01000001.1 tRNAscan-SE exon 656 728 . + . ID=exon-D5F92_RS00015-1;Parent=rna-D5F92_RS00015;anticodon=(pos:689..691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00015;product=tRNA-Val NZ_QYTJ01000001.1 RefSeq gene 731 803 . + . ID=gene-D5F92_RS00020;Name=D5F92_RS00020;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00020;old_locus_tag=D5F92_00020 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 731 803 . + . ID=rna-D5F92_RS00020;Parent=gene-D5F92_RS00020;anticodon=(pos:764..766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00020;product=tRNA-Asp NZ_QYTJ01000001.1 tRNAscan-SE exon 731 803 . + . ID=exon-D5F92_RS00020-1;Parent=rna-D5F92_RS00020;anticodon=(pos:764..766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00020;product=tRNA-Asp NZ_QYTJ01000001.1 RefSeq gene 806 878 . + . ID=gene-D5F92_RS00025;Name=D5F92_RS00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00025;old_locus_tag=D5F92_00025 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 806 878 . + . ID=rna-D5F92_RS00025;Parent=gene-D5F92_RS00025;anticodon=(pos:839..841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00025;product=tRNA-Lys NZ_QYTJ01000001.1 tRNAscan-SE exon 806 878 . + . ID=exon-D5F92_RS00025-1;Parent=rna-D5F92_RS00025;anticodon=(pos:839..841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00025;product=tRNA-Lys NZ_QYTJ01000001.1 RefSeq gene 888 969 . + . ID=gene-D5F92_RS00030;Name=D5F92_RS00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00030;old_locus_tag=D5F92_00030 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 888 969 . + . ID=rna-D5F92_RS00030;Parent=gene-D5F92_RS00030;anticodon=(pos:922..924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00030;product=tRNA-Leu NZ_QYTJ01000001.1 tRNAscan-SE exon 888 969 . + . ID=exon-D5F92_RS00030-1;Parent=rna-D5F92_RS00030;anticodon=(pos:922..924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00030;product=tRNA-Leu NZ_QYTJ01000001.1 RefSeq gene 980 1052 . + . ID=gene-D5F92_RS00035;Name=D5F92_RS00035;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00035;old_locus_tag=D5F92_00035 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 980 1052 . + . ID=rna-D5F92_RS00035;Parent=gene-D5F92_RS00035;anticodon=(pos:1013..1015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00035;product=tRNA-Thr NZ_QYTJ01000001.1 tRNAscan-SE exon 980 1052 . + . ID=exon-D5F92_RS00035-1;Parent=rna-D5F92_RS00035;anticodon=(pos:1013..1015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00035;product=tRNA-Thr NZ_QYTJ01000001.1 RefSeq gene 1086 1157 . + . ID=gene-D5F92_RS00040;Name=D5F92_RS00040;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00040;old_locus_tag=D5F92_00040 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1086 1157 . + . ID=rna-D5F92_RS00040;Parent=gene-D5F92_RS00040;anticodon=(pos:1118..1120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00040;product=tRNA-Gly NZ_QYTJ01000001.1 tRNAscan-SE exon 1086 1157 . + . ID=exon-D5F92_RS00040-1;Parent=rna-D5F92_RS00040;anticodon=(pos:1118..1120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00040;product=tRNA-Gly NZ_QYTJ01000001.1 RefSeq gene 1166 1250 . + . ID=gene-D5F92_RS00045;Name=D5F92_RS00045;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00045;old_locus_tag=D5F92_00045 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1166 1250 . + . ID=rna-D5F92_RS00045;Parent=gene-D5F92_RS00045;anticodon=(pos:1200..1202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00045;product=tRNA-Leu NZ_QYTJ01000001.1 tRNAscan-SE exon 1166 1250 . + . ID=exon-D5F92_RS00045-1;Parent=rna-D5F92_RS00045;anticodon=(pos:1200..1202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00045;product=tRNA-Leu NZ_QYTJ01000001.1 RefSeq gene 1262 1335 . + . ID=gene-D5F92_RS00050;Name=D5F92_RS00050;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00050;old_locus_tag=D5F92_00050 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1262 1335 . + . ID=rna-D5F92_RS00050;Parent=gene-D5F92_RS00050;anticodon=(pos:1296..1298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00050;product=tRNA-Arg NZ_QYTJ01000001.1 tRNAscan-SE exon 1262 1335 . + . ID=exon-D5F92_RS00050-1;Parent=rna-D5F92_RS00050;anticodon=(pos:1296..1298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00050;product=tRNA-Arg NZ_QYTJ01000001.1 RefSeq gene 1343 1416 . + . ID=gene-D5F92_RS00055;Name=D5F92_RS00055;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00055;old_locus_tag=D5F92_00055 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1343 1416 . + . ID=rna-D5F92_RS00055;Parent=gene-D5F92_RS00055;anticodon=(pos:1377..1379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00055;product=tRNA-Pro NZ_QYTJ01000001.1 tRNAscan-SE exon 1343 1416 . + . ID=exon-D5F92_RS00055-1;Parent=rna-D5F92_RS00055;anticodon=(pos:1377..1379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00055;product=tRNA-Pro NZ_QYTJ01000001.1 RefSeq gene 1432 1505 . + . ID=gene-D5F92_RS00060;Name=D5F92_RS00060;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00060;old_locus_tag=D5F92_00060 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1432 1505 . + . ID=rna-D5F92_RS00060;Parent=gene-D5F92_RS00060;anticodon=(pos:1466..1468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00060;product=tRNA-Met NZ_QYTJ01000001.1 tRNAscan-SE exon 1432 1505 . + . ID=exon-D5F92_RS00060-1;Parent=rna-D5F92_RS00060;anticodon=(pos:1466..1468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00060;product=tRNA-Met NZ_QYTJ01000001.1 RefSeq gene 1525 1598 . + . ID=gene-D5F92_RS00065;Name=D5F92_RS00065;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00065;old_locus_tag=D5F92_00065 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1525 1598 . + . ID=rna-D5F92_RS00065;Parent=gene-D5F92_RS00065;anticodon=(pos:1559..1561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00065;product=tRNA-Ile NZ_QYTJ01000001.1 tRNAscan-SE exon 1525 1598 . + . ID=exon-D5F92_RS00065-1;Parent=rna-D5F92_RS00065;anticodon=(pos:1559..1561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00065;product=tRNA-Ile NZ_QYTJ01000001.1 RefSeq gene 1614 1703 . + . ID=gene-D5F92_RS00070;Name=D5F92_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00070;old_locus_tag=D5F92_00070 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1614 1703 . + . ID=rna-D5F92_RS00070;Parent=gene-D5F92_RS00070;anticodon=(pos:1650..1652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00070;product=tRNA-Ser NZ_QYTJ01000001.1 tRNAscan-SE exon 1614 1703 . + . ID=exon-D5F92_RS00070-1;Parent=rna-D5F92_RS00070;anticodon=(pos:1650..1652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00070;product=tRNA-Ser NZ_QYTJ01000001.1 RefSeq gene 1714 1787 . + . ID=gene-D5F92_RS00075;Name=D5F92_RS00075;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00075;old_locus_tag=D5F92_00075 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1714 1787 . + . ID=rna-D5F92_RS00075;Parent=gene-D5F92_RS00075;anticodon=(pos:1748..1750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00075;product=tRNA-Met NZ_QYTJ01000001.1 tRNAscan-SE exon 1714 1787 . + . ID=exon-D5F92_RS00075-1;Parent=rna-D5F92_RS00075;anticodon=(pos:1748..1750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00075;product=tRNA-Met NZ_QYTJ01000001.1 RefSeq gene 1790 1862 . + . ID=gene-D5F92_RS00080;Name=D5F92_RS00080;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00080;old_locus_tag=D5F92_00080 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1790 1862 . + . ID=rna-D5F92_RS00080;Parent=gene-D5F92_RS00080;anticodon=(pos:1823..1825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00080;product=tRNA-Phe NZ_QYTJ01000001.1 tRNAscan-SE exon 1790 1862 . + . ID=exon-D5F92_RS00080-1;Parent=rna-D5F92_RS00080;anticodon=(pos:1823..1825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00080;product=tRNA-Phe NZ_QYTJ01000001.1 RefSeq gene 1882 1952 . + . ID=gene-D5F92_RS00085;Name=D5F92_RS00085;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00085;old_locus_tag=D5F92_00085 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1882 1952 . + . ID=rna-D5F92_RS00085;Parent=gene-D5F92_RS00085;anticodon=(pos:1914..1916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00085;product=tRNA-Gly NZ_QYTJ01000001.1 tRNAscan-SE exon 1882 1952 . + . ID=exon-D5F92_RS00085-1;Parent=rna-D5F92_RS00085;anticodon=(pos:1914..1916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00085;product=tRNA-Gly NZ_QYTJ01000001.1 RefSeq gene 1987 2060 . + . ID=gene-D5F92_RS00090;Name=D5F92_RS00090;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00090;old_locus_tag=D5F92_00090 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 1987 2060 . + . ID=rna-D5F92_RS00090;Parent=gene-D5F92_RS00090;anticodon=(pos:2021..2023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00090;product=tRNA-Ile NZ_QYTJ01000001.1 tRNAscan-SE exon 1987 2060 . + . ID=exon-D5F92_RS00090-1;Parent=rna-D5F92_RS00090;anticodon=(pos:2021..2023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00090;product=tRNA-Ile NZ_QYTJ01000001.1 RefSeq gene 2074 2161 . + . ID=gene-D5F92_RS00095;Name=D5F92_RS00095;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00095;old_locus_tag=D5F92_00095 NZ_QYTJ01000001.1 tRNAscan-SE tRNA 2074 2161 . + . ID=rna-D5F92_RS00095;Parent=gene-D5F92_RS00095;anticodon=(pos:2108..2110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00095;product=tRNA-Ser NZ_QYTJ01000001.1 tRNAscan-SE exon 2074 2161 . + . ID=exon-D5F92_RS00095-1;Parent=rna-D5F92_RS00095;anticodon=(pos:2108..2110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00095;product=tRNA-Ser NZ_QYTJ01000001.1 RefSeq gene 2397 3734 . + . ID=gene-D5F92_RS00100;Name=D5F92_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00100;old_locus_tag=D5F92_00100 NZ_QYTJ01000001.1 Protein Homology CDS 2397 3734 . + 0 ID=cds-WP_000746075.1;Parent=gene-D5F92_RS00100;Dbxref=GenBank:WP_000746075.1;Name=WP_000746075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646828.1;locus_tag=D5F92_RS00100;product=PcsB-like coiled-coil domain-containing protein;protein_id=WP_000746075.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 3858 4826 . + . ID=gene-D5F92_RS00105;Name=D5F92_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00105;old_locus_tag=D5F92_00105 NZ_QYTJ01000001.1 Protein Homology CDS 3858 4826 . + 0 ID=cds-WP_016502368.1;Parent=gene-D5F92_RS00105;Dbxref=GenBank:WP_016502368.1;Name=WP_016502368.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122447.1;locus_tag=D5F92_RS00105;product=ribose-phosphate diphosphokinase;protein_id=WP_016502368.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 4934 6109 . + . ID=gene-D5F92_RS00110;Name=D5F92_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00110;old_locus_tag=D5F92_00110 NZ_QYTJ01000001.1 Protein Homology CDS 4934 6109 . + 0 ID=cds-WP_000171460.1;Parent=gene-D5F92_RS00110;Dbxref=GenBank:WP_000171460.1;Name=WP_000171460.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171461.1;locus_tag=D5F92_RS00110;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000171460.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 6099 6860 . + . ID=gene-D5F92_RS00115;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=D5F92_RS00115;old_locus_tag=D5F92_00115 NZ_QYTJ01000001.1 Protein Homology CDS 6099 6860 . + 0 ID=cds-WP_001266269.1;Parent=gene-D5F92_RS00115;Dbxref=GenBank:WP_001266269.1;Name=WP_001266269.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649246.1;locus_tag=D5F92_RS00115;product=DNA repair protein RecO;protein_id=WP_001266269.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 6923 7801 . + . ID=gene-D5F92_RS00120;Name=D5F92_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00120;old_locus_tag=D5F92_00120 NZ_QYTJ01000001.1 Protein Homology CDS 6923 7801 . + 0 ID=cds-WP_185690638.1;Parent=gene-D5F92_RS00120;Dbxref=GenBank:WP_185690638.1;Name=WP_185690638.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420133.1;locus_tag=D5F92_RS00120;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_185690638.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 7879 8871 . + . ID=gene-D5F92_RS00125;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=D5F92_RS00125;old_locus_tag=D5F92_00125 NZ_QYTJ01000001.1 Protein Homology CDS 7879 8871 . + 0 ID=cds-WP_000717415.1;Parent=gene-D5F92_RS00125;Dbxref=GenBank:WP_000717415.1;Name=WP_000717415.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716823.1;locus_tag=D5F92_RS00125;product=phosphate acyltransferase PlsX;protein_id=WP_000717415.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 8882 9121 . + . ID=gene-D5F92_RS00130;Name=D5F92_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00130;old_locus_tag=D5F92_00130 NZ_QYTJ01000001.1 Protein Homology CDS 8882 9121 . + 0 ID=cds-WP_000085641.1;Parent=gene-D5F92_RS00130;Dbxref=GenBank:WP_000085641.1;Name=WP_000085641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085641.1;locus_tag=D5F92_RS00130;product=phosphopantetheine-binding protein;protein_id=WP_000085641.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 9245 9949 . + . ID=gene-D5F92_RS00135;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=D5F92_RS00135;old_locus_tag=D5F92_00135 NZ_QYTJ01000001.1 Protein Homology CDS 9245 9949 . + 0 ID=cds-WP_016480151.1;Parent=gene-D5F92_RS00135;Dbxref=GenBank:WP_016480151.1;Name=WP_016480151.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648569.1;locus_tag=D5F92_RS00135;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_016480151.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq pseudogene 10072 13797 . + . ID=gene-D5F92_RS00140;Name=D5F92_RS00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00140;old_locus_tag=D5F92_00140;pseudo=true NZ_QYTJ01000001.1 Protein Homology CDS 10072 13797 . + 0 ID=cds-D5F92_RS00140;Parent=gene-D5F92_RS00140;Note=internal stop;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361233.1;locus_tag=D5F92_RS00140;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11 NZ_QYTJ01000001.1 RefSeq pseudogene 14031 15481 . + . ID=gene-D5F92_RS00145;Name=purF;gbkey=Gene;gene=purF;gene_biotype=pseudogene;locus_tag=D5F92_RS00145;old_locus_tag=D5F92_00145;pseudo=true NZ_QYTJ01000001.1 Protein Homology CDS 14031 15481 . + 0 ID=cds-D5F92_RS00145;Parent=gene-D5F92_RS00145;Note=frameshifted;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480155.1;locus_tag=D5F92_RS00145;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 15509 16531 . + . ID=gene-D5F92_RS00150;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=D5F92_RS00150;old_locus_tag=D5F92_00150 NZ_QYTJ01000001.1 Protein Homology CDS 15509 16531 . + 0 ID=cds-WP_016480156.1;Parent=gene-D5F92_RS00150;Dbxref=GenBank:WP_016480156.1;Name=WP_016480156.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480156.1;locus_tag=D5F92_RS00150;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_016480156.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 16699 17247 . + . ID=gene-D5F92_RS00155;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=D5F92_RS00155;old_locus_tag=D5F92_00155 NZ_QYTJ01000001.1 Protein Homology CDS 16699 17247 . + 0 ID=cds-WP_016502375.1;Parent=gene-D5F92_RS00155;Dbxref=GenBank:WP_016502375.1;Name=WP_016502375.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502375.1;locus_tag=D5F92_RS00155;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_016502375.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 17270 18022 . + . ID=gene-D5F92_RS00160;Name=D5F92_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00160;old_locus_tag=D5F92_00160 NZ_QYTJ01000001.1 Protein Homology CDS 17270 18022 . + 0 ID=cds-WP_124749346.1;Parent=gene-D5F92_RS00160;Dbxref=GenBank:WP_124749346.1;Name=WP_124749346.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780023.1;locus_tag=D5F92_RS00160;product=GNAT family N-acetyltransferase;protein_id=WP_124749346.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 18042 19589 . + . ID=gene-D5F92_RS00165;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=D5F92_RS00165;old_locus_tag=D5F92_00165 NZ_QYTJ01000001.1 Protein Homology CDS 18042 19589 . + 0 ID=cds-WP_124749345.1;Parent=gene-D5F92_RS00165;Dbxref=GenBank:WP_124749345.1;Name=WP_124749345.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=D5F92_RS00165;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_124749345.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 19781 20680 . + . ID=gene-D5F92_RS00170;Name=D5F92_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00170;old_locus_tag=D5F92_00170 NZ_QYTJ01000001.1 Protein Homology CDS 19781 20680 . + 0 ID=cds-WP_001045909.1;Parent=gene-D5F92_RS00170;Dbxref=GenBank:WP_001045909.1;Name=WP_001045909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001045916.1;locus_tag=D5F92_RS00170;product=lytic exoenzyme target recognition domain-containing protein;protein_id=WP_001045909.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 20827 22131 . + . ID=gene-D5F92_RS00175;Name=sip;gbkey=Gene;gene=sip;gene_biotype=protein_coding;locus_tag=D5F92_RS00175;old_locus_tag=D5F92_00175 NZ_QYTJ01000001.1 Protein Homology CDS 20827 22131 . + 0 ID=cds-WP_124785401.1;Parent=gene-D5F92_RS00175;Dbxref=GenBank:WP_124785401.1;Name=WP_124785401.1;gbkey=CDS;gene=sip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783421.1;locus_tag=D5F92_RS00175;product=surface immunogenic protein Sip;protein_id=WP_124785401.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 22378 23076 . + . ID=gene-D5F92_RS00180;Name=D5F92_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00180;old_locus_tag=D5F92_00180 NZ_QYTJ01000001.1 Protein Homology CDS 22378 23076 . + 0 ID=cds-WP_001120327.1;Parent=gene-D5F92_RS00180;Dbxref=GenBank:WP_001120327.1;Name=WP_001120327.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480161.1;locus_tag=D5F92_RS00180;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001120327.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 23123 24439 . + . ID=gene-D5F92_RS00185;Name=D5F92_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00185;old_locus_tag=D5F92_00185 NZ_QYTJ01000001.1 Protein Homology CDS 23123 24439 . + 0 ID=cds-WP_000023462.1;Parent=gene-D5F92_RS00185;Dbxref=GenBank:WP_000023462.1;Name=WP_000023462.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023460.1;locus_tag=D5F92_RS00185;product=ABC transporter substrate-binding protein;protein_id=WP_000023462.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 24527 25414 . + . ID=gene-D5F92_RS00190;Name=D5F92_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00190;old_locus_tag=D5F92_00190 NZ_QYTJ01000001.1 Protein Homology CDS 24527 25414 . + 0 ID=cds-WP_001260027.1;Parent=gene-D5F92_RS00190;Dbxref=GenBank:WP_001260027.1;Name=WP_001260027.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041053.1;locus_tag=D5F92_RS00190;product=carbohydrate ABC transporter permease;protein_id=WP_001260027.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 25424 26254 . + . ID=gene-D5F92_RS00195;Name=D5F92_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00195;old_locus_tag=D5F92_00195 NZ_QYTJ01000001.1 Protein Homology CDS 25424 26254 . + 0 ID=cds-WP_086163172.1;Parent=gene-D5F92_RS00195;Dbxref=GenBank:WP_086163172.1;Name=WP_086163172.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767339.1;locus_tag=D5F92_RS00195;product=carbohydrate ABC transporter permease;protein_id=WP_086163172.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 26267 26710 . + . ID=gene-D5F92_RS00200;Name=D5F92_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00200;old_locus_tag=D5F92_00200 NZ_QYTJ01000001.1 Protein Homology CDS 26267 26710 . + 0 ID=cds-WP_016502379.1;Parent=gene-D5F92_RS00200;Dbxref=GenBank:WP_016502379.1;Name=WP_016502379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502379.1;locus_tag=D5F92_RS00200;product=YhcH/YjgK/YiaL family protein;protein_id=WP_016502379.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 26730 27392 . + . ID=gene-D5F92_RS00205;Name=D5F92_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00205;old_locus_tag=D5F92_00205 NZ_QYTJ01000001.1 Protein Homology CDS 26730 27392 . + 0 ID=cds-WP_016502380.1;Parent=gene-D5F92_RS00205;Dbxref=GenBank:WP_016502380.1;Name=WP_016502380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710138.1;locus_tag=D5F92_RS00205;product=YesL family protein;protein_id=WP_016502380.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 27389 28306 . + . ID=gene-D5F92_RS00210;Name=D5F92_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00210;old_locus_tag=D5F92_00210 NZ_QYTJ01000001.1 Protein Homology CDS 27389 28306 . + 0 ID=cds-WP_124749344.1;Parent=gene-D5F92_RS00210;Dbxref=GenBank:WP_124749344.1;Name=WP_124749344.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654097.1;locus_tag=D5F92_RS00210;product=dihydrodipicolinate synthase family protein;protein_id=WP_124749344.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 28323 29204 . + . ID=gene-D5F92_RS00215;Name=D5F92_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00215;old_locus_tag=D5F92_00215 NZ_QYTJ01000001.1 Protein Homology CDS 28323 29204 . + 0 ID=cds-WP_016502382.1;Parent=gene-D5F92_RS00215;Dbxref=GenBank:WP_016502382.1;Name=WP_016502382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198864.1;locus_tag=D5F92_RS00215;product=ROK family protein;protein_id=WP_016502382.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 29212 30189 . + . ID=gene-D5F92_RS00220;Name=D5F92_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00220;old_locus_tag=D5F92_00220 NZ_QYTJ01000001.1 Protein Homology CDS 29212 30189 . + 0 ID=cds-WP_000573443.1;Parent=gene-D5F92_RS00220;Dbxref=GenBank:WP_000573443.1;Name=WP_000573443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573447.1;locus_tag=D5F92_RS00220;product=alpha/beta fold hydrolase;protein_id=WP_000573443.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 30212 31015 . - . ID=gene-D5F92_RS00225;Name=D5F92_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00225;old_locus_tag=D5F92_00225 NZ_QYTJ01000001.1 Protein Homology CDS 30212 31015 . - 0 ID=cds-WP_000158188.1;Parent=gene-D5F92_RS00225;Dbxref=GenBank:WP_000158188.1;Name=WP_000158188.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158185.1;locus_tag=D5F92_RS00225;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000158188.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 31298 32563 . + . ID=gene-D5F92_RS00230;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=D5F92_RS00230;old_locus_tag=D5F92_00230 NZ_QYTJ01000001.1 Protein Homology CDS 31298 32563 . + 0 ID=cds-WP_124749342.1;Parent=gene-D5F92_RS00230;Dbxref=GenBank:WP_124749342.1;Name=WP_124749342.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502383.1;locus_tag=D5F92_RS00230;product=phosphoribosylamine--glycine ligase;protein_id=WP_124749342.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 32775 33263 . + . ID=gene-D5F92_RS00235;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=D5F92_RS00235;old_locus_tag=D5F92_00235 NZ_QYTJ01000001.1 Protein Homology CDS 32775 33263 . + 0 ID=cds-WP_016502384.1;Parent=gene-D5F92_RS00235;Dbxref=GenBank:WP_016502384.1;Name=WP_016502384.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011888522.1;locus_tag=D5F92_RS00235;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_016502384.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 33250 34323 . + . ID=gene-D5F92_RS00240;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=D5F92_RS00240;old_locus_tag=D5F92_00240 NZ_QYTJ01000001.1 Protein Homology CDS 33250 34323 . + 0 ID=cds-WP_086163173.1;Parent=gene-D5F92_RS00240;Dbxref=GenBank:WP_086163173.1;Name=WP_086163173.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297771.1;locus_tag=D5F92_RS00240;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_086163173.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 34373 36907 . + . ID=gene-D5F92_RS00245;Name=D5F92_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00245;old_locus_tag=D5F92_00245 NZ_QYTJ01000001.1 Protein Homology CDS 34373 36907 . + 0 ID=cds-WP_180383420.1;Parent=gene-D5F92_RS00245;Dbxref=GenBank:WP_180383420.1;Name=WP_180383420.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=D5F92_RS00245;product=DEAD/DEAH box helicase;protein_id=WP_180383420.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 37168 38466 . + . ID=gene-D5F92_RS00250;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=D5F92_RS00250;old_locus_tag=D5F92_00250 NZ_QYTJ01000001.1 Protein Homology CDS 37168 38466 . + 0 ID=cds-WP_016502387.1;Parent=gene-D5F92_RS00250;Dbxref=GenBank:WP_016502387.1;Name=WP_016502387.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572892.1;locus_tag=D5F92_RS00250;product=adenylosuccinate lyase;protein_id=WP_016502387.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 38619 39530 . + . ID=gene-D5F92_RS00255;Name=D5F92_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00255;old_locus_tag=D5F92_00255 NZ_QYTJ01000001.1 Protein Homology CDS 38619 39530 . + 0 ID=cds-WP_124749341.1;Parent=gene-D5F92_RS00255;Dbxref=GenBank:WP_124749341.1;Name=WP_124749341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631716.1;locus_tag=D5F92_RS00255;product=helix-turn-helix domain-containing protein;protein_id=WP_124749341.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 39827 40825 . + . ID=gene-D5F92_RS00260;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=D5F92_RS00260;old_locus_tag=D5F92_00260 NZ_QYTJ01000001.1 Protein Homology CDS 39827 40825 . + 0 ID=cds-WP_000196633.1;Parent=gene-D5F92_RS00260;Dbxref=GenBank:WP_000196633.1;Name=WP_000196633.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001902090.1;locus_tag=D5F92_RS00260;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000196633.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 40977 41414 . + . ID=gene-D5F92_RS00265;Name=D5F92_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00265;old_locus_tag=D5F92_00265 NZ_QYTJ01000001.1 Protein Homology CDS 40977 41414 . + 0 ID=cds-WP_016502390.1;Parent=gene-D5F92_RS00265;Dbxref=GenBank:WP_016502390.1;Name=WP_016502390.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058280.1;locus_tag=D5F92_RS00265;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_016502390.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 41421 41801 . + . ID=gene-D5F92_RS00270;Name=D5F92_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00270;old_locus_tag=D5F92_00270 NZ_QYTJ01000001.1 Protein Homology CDS 41421 41801 . + 0 ID=cds-WP_000787702.1;Parent=gene-D5F92_RS00270;Dbxref=GenBank:WP_000787702.1;Name=WP_000787702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787700.1;locus_tag=D5F92_RS00270;product=membrane protein;protein_id=WP_000787702.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 41798 43576 . + . ID=gene-D5F92_RS00275;Name=D5F92_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00275;old_locus_tag=D5F92_00275 NZ_QYTJ01000001.1 Protein Homology CDS 41798 43576 . + 0 ID=cds-WP_016502391.1;Parent=gene-D5F92_RS00275;Dbxref=GenBank:WP_016502391.1;Name=WP_016502391.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220914.1;locus_tag=D5F92_RS00275;product=acyltransferase family protein;protein_id=WP_016502391.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 43845 46487 . + . ID=gene-D5F92_RS00280;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=D5F92_RS00280;old_locus_tag=D5F92_00280 NZ_QYTJ01000001.1 Protein Homology CDS 43845 46487 . + 0 ID=cds-WP_016502392.1;Parent=gene-D5F92_RS00280;Dbxref=GenBank:WP_016502392.1;Name=WP_016502392.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011888528.1;locus_tag=D5F92_RS00280;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_016502392.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 46666 47682 . + . ID=gene-D5F92_RS00285;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=D5F92_RS00285;old_locus_tag=D5F92_00285 NZ_QYTJ01000001.1 Protein Homology CDS 46666 47682 . + 0 ID=cds-WP_000649193.1;Parent=gene-D5F92_RS00285;Dbxref=GenBank:WP_000649193.1;Name=WP_000649193.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649198.1;locus_tag=D5F92_RS00285;product=alcohol dehydrogenase AdhP;protein_id=WP_000649193.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 47802 49292 . + . ID=gene-D5F92_RS00290;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=D5F92_RS00290;old_locus_tag=D5F92_00290 NZ_QYTJ01000001.1 Protein Homology CDS 47802 49292 . + 0 ID=cds-WP_016502393.1;Parent=gene-D5F92_RS00290;Dbxref=GenBank:WP_016502393.1;Name=WP_016502393.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029130.1;locus_tag=D5F92_RS00290;product=threonine synthase;protein_id=WP_016502393.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 49397 50677 . + . ID=gene-D5F92_RS00295;Name=D5F92_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00295;old_locus_tag=D5F92_00295 NZ_QYTJ01000001.1 Protein Homology CDS 49397 50677 . + 0 ID=cds-WP_086163177.1;Parent=gene-D5F92_RS00295;Dbxref=GenBank:WP_086163177.1;Name=WP_086163177.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270709.1;locus_tag=D5F92_RS00295;product=MATE family efflux transporter;protein_id=WP_086163177.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 50883 51191 . + . ID=gene-D5F92_RS00300;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=D5F92_RS00300;old_locus_tag=D5F92_00300 NZ_QYTJ01000001.1 Protein Homology CDS 50883 51191 . + 0 ID=cds-WP_001284518.1;Parent=gene-D5F92_RS00300;Dbxref=GenBank:WP_001284518.1;Name=WP_001284518.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=D5F92_RS00300;product=30S ribosomal protein S10;protein_id=WP_001284518.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 51296 51922 . + . ID=gene-D5F92_RS00305;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=D5F92_RS00305;old_locus_tag=D5F92_00305 NZ_QYTJ01000001.1 Protein Homology CDS 51296 51922 . + 0 ID=cds-WP_000160205.1;Parent=gene-D5F92_RS00305;Dbxref=GenBank:WP_000160205.1;Name=WP_000160205.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=D5F92_RS00305;product=50S ribosomal protein L3;protein_id=WP_000160205.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 51946 52569 . + . ID=gene-D5F92_RS00310;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=D5F92_RS00310;old_locus_tag=D5F92_00310 NZ_QYTJ01000001.1 Protein Homology CDS 51946 52569 . + 0 ID=cds-WP_000024418.1;Parent=gene-D5F92_RS00310;Dbxref=GenBank:WP_000024418.1;Name=WP_000024418.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=D5F92_RS00310;product=50S ribosomal protein L4;protein_id=WP_000024418.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 52569 52865 . + . ID=gene-D5F92_RS00315;Name=D5F92_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00315;old_locus_tag=D5F92_00315 NZ_QYTJ01000001.1 Protein Homology CDS 52569 52865 . + 0 ID=cds-WP_016502395.1;Parent=gene-D5F92_RS00315;Dbxref=GenBank:WP_016502395.1;Name=WP_016502395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739217.1;locus_tag=D5F92_RS00315;product=50S ribosomal protein L23;protein_id=WP_016502395.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 52883 53716 . + . ID=gene-D5F92_RS00320;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=D5F92_RS00320;old_locus_tag=D5F92_00320 NZ_QYTJ01000001.1 Protein Homology CDS 52883 53716 . + 0 ID=cds-WP_000511737.1;Parent=gene-D5F92_RS00320;Dbxref=GenBank:WP_000511737.1;Name=WP_000511737.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=D5F92_RS00320;product=50S ribosomal protein L2;protein_id=WP_000511737.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 53814 54092 . + . ID=gene-D5F92_RS00325;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=D5F92_RS00325;old_locus_tag=D5F92_00325 NZ_QYTJ01000001.1 Protein Homology CDS 53814 54092 . + 0 ID=cds-WP_000533765.1;Parent=gene-D5F92_RS00325;Dbxref=GenBank:WP_000533765.1;Name=WP_000533765.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=D5F92_RS00325;product=30S ribosomal protein S19;protein_id=WP_000533765.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 54108 54452 . + . ID=gene-D5F92_RS00330;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=D5F92_RS00330;old_locus_tag=D5F92_00330 NZ_QYTJ01000001.1 Protein Homology CDS 54108 54452 . + 0 ID=cds-WP_000818141.1;Parent=gene-D5F92_RS00330;Dbxref=GenBank:WP_000818141.1;Name=WP_000818141.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=D5F92_RS00330;product=50S ribosomal protein L22;protein_id=WP_000818141.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 54465 55118 . + . ID=gene-D5F92_RS00335;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=D5F92_RS00335;old_locus_tag=D5F92_00335 NZ_QYTJ01000001.1 Protein Homology CDS 54465 55118 . + 0 ID=cds-WP_000529929.1;Parent=gene-D5F92_RS00335;Dbxref=GenBank:WP_000529929.1;Name=WP_000529929.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=D5F92_RS00335;product=30S ribosomal protein S3;protein_id=WP_000529929.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 55122 55535 . + . ID=gene-D5F92_RS00340;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=D5F92_RS00340;old_locus_tag=D5F92_00340 NZ_QYTJ01000001.1 Protein Homology CDS 55122 55535 . + 0 ID=cds-WP_000960950.1;Parent=gene-D5F92_RS00340;Dbxref=GenBank:WP_000960950.1;Name=WP_000960950.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=D5F92_RS00340;product=50S ribosomal protein L16;protein_id=WP_000960950.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 55545 55751 . + . ID=gene-D5F92_RS00345;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=D5F92_RS00345;old_locus_tag=D5F92_00345 NZ_QYTJ01000001.1 Protein Homology CDS 55545 55751 . + 0 ID=cds-WP_000775731.1;Parent=gene-D5F92_RS00345;Dbxref=GenBank:WP_000775731.1;Name=WP_000775731.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739716.1;locus_tag=D5F92_RS00345;product=50S ribosomal protein L29;protein_id=WP_000775731.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 55777 56037 . + . ID=gene-D5F92_RS00350;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=D5F92_RS00350;old_locus_tag=D5F92_00350 NZ_QYTJ01000001.1 Protein Homology CDS 55777 56037 . + 0 ID=cds-WP_000440811.1;Parent=gene-D5F92_RS00350;Dbxref=GenBank:WP_000440811.1;Name=WP_000440811.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=D5F92_RS00350;product=30S ribosomal protein S17;protein_id=WP_000440811.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 56062 56430 . + . ID=gene-D5F92_RS00355;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=D5F92_RS00355;old_locus_tag=D5F92_00355 NZ_QYTJ01000001.1 Protein Homology CDS 56062 56430 . + 0 ID=cds-WP_000615920.1;Parent=gene-D5F92_RS00355;Dbxref=GenBank:WP_000615920.1;Name=WP_000615920.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=D5F92_RS00355;product=50S ribosomal protein L14;protein_id=WP_000615920.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 56510 56815 . + . ID=gene-D5F92_RS00360;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=D5F92_RS00360;old_locus_tag=D5F92_00360 NZ_QYTJ01000001.1 Protein Homology CDS 56510 56815 . + 0 ID=cds-WP_000497687.1;Parent=gene-D5F92_RS00360;Dbxref=GenBank:WP_000497687.1;Name=WP_000497687.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=D5F92_RS00360;product=50S ribosomal protein L24;protein_id=WP_000497687.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 56839 57381 . + . ID=gene-D5F92_RS00365;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=D5F92_RS00365;old_locus_tag=D5F92_00365 NZ_QYTJ01000001.1 Protein Homology CDS 56839 57381 . + 0 ID=cds-WP_000013545.1;Parent=gene-D5F92_RS00365;Dbxref=GenBank:WP_000013545.1;Name=WP_000013545.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=D5F92_RS00365;product=50S ribosomal protein L5;protein_id=WP_000013545.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 57399 57584 . + . ID=gene-D5F92_RS00370;Name=D5F92_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00370;old_locus_tag=D5F92_00370 NZ_QYTJ01000001.1 Protein Homology CDS 57399 57584 . + 0 ID=cds-WP_001085698.1;Parent=gene-D5F92_RS00370;Dbxref=GenBank:WP_001085698.1;Name=WP_001085698.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=D5F92_RS00370;product=type Z 30S ribosomal protein S14;protein_id=WP_001085698.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 57739 58137 . + . ID=gene-D5F92_RS00375;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=D5F92_RS00375;old_locus_tag=D5F92_00375 NZ_QYTJ01000001.1 Protein Homology CDS 57739 58137 . + 0 ID=cds-WP_000245501.1;Parent=gene-D5F92_RS00375;Dbxref=GenBank:WP_000245501.1;Name=WP_000245501.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=D5F92_RS00375;product=30S ribosomal protein S8;protein_id=WP_000245501.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 58247 58783 . + . ID=gene-D5F92_RS00380;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=D5F92_RS00380;old_locus_tag=D5F92_00380 NZ_QYTJ01000001.1 Protein Homology CDS 58247 58783 . + 0 ID=cds-WP_000086620.1;Parent=gene-D5F92_RS00380;Dbxref=GenBank:WP_000086620.1;Name=WP_000086620.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=D5F92_RS00380;product=50S ribosomal protein L6;protein_id=WP_000086620.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 58884 59240 . + . ID=gene-D5F92_RS00385;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=D5F92_RS00385;old_locus_tag=D5F92_00385 NZ_QYTJ01000001.1 Protein Homology CDS 58884 59240 . + 0 ID=cds-WP_001865622.1;Parent=gene-D5F92_RS00385;Dbxref=GenBank:WP_001865622.1;Name=WP_001865622.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374469.1;locus_tag=D5F92_RS00385;product=50S ribosomal protein L18;protein_id=WP_001865622.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 59259 59753 . + . ID=gene-D5F92_RS00390;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=D5F92_RS00390;old_locus_tag=D5F92_00390 NZ_QYTJ01000001.1 Protein Homology CDS 59259 59753 . + 0 ID=cds-WP_124749340.1;Parent=gene-D5F92_RS00390;Dbxref=GenBank:WP_124749340.1;Name=WP_124749340.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=D5F92_RS00390;product=30S ribosomal protein S5;protein_id=WP_124749340.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 59768 59947 . + . ID=gene-D5F92_RS00395;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=D5F92_RS00395;old_locus_tag=D5F92_00395 NZ_QYTJ01000001.1 Protein Homology CDS 59768 59947 . + 0 ID=cds-WP_000057245.1;Parent=gene-D5F92_RS00395;Dbxref=GenBank:WP_000057245.1;Name=WP_000057245.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057245.1;locus_tag=D5F92_RS00395;product=50S ribosomal protein L30;protein_id=WP_000057245.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 60072 60512 . + . ID=gene-D5F92_RS00400;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=D5F92_RS00400;old_locus_tag=D5F92_00400 NZ_QYTJ01000001.1 Protein Homology CDS 60072 60512 . + 0 ID=cds-WP_000766093.1;Parent=gene-D5F92_RS00400;Dbxref=GenBank:WP_000766093.1;Name=WP_000766093.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1;locus_tag=D5F92_RS00400;product=50S ribosomal protein L15;protein_id=WP_000766093.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 60533 61837 . + . ID=gene-D5F92_RS00405;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=D5F92_RS00405;old_locus_tag=D5F92_00405 NZ_QYTJ01000001.1 Protein Homology CDS 60533 61837 . + 0 ID=cds-WP_016502396.1;Parent=gene-D5F92_RS00405;Dbxref=GenBank:WP_016502396.1;Name=WP_016502396.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631723.1;locus_tag=D5F92_RS00405;product=preprotein translocase subunit SecY;protein_id=WP_016502396.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 61932 62570 . + . ID=gene-D5F92_RS00410;Name=D5F92_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00410;old_locus_tag=D5F92_00410 NZ_QYTJ01000001.1 Protein Homology CDS 61932 62570 . + 0 ID=cds-WP_001050419.1;Parent=gene-D5F92_RS00410;Dbxref=GenBank:WP_001050419.1;Name=WP_001050419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050422.1;locus_tag=D5F92_RS00410;product=adenylate kinase;protein_id=WP_001050419.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 62686 62904 . + . ID=gene-D5F92_RS00415;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=D5F92_RS00415;old_locus_tag=D5F92_00415 NZ_QYTJ01000001.1 Protein Homology CDS 62686 62904 . + 0 ID=cds-WP_001040189.1;Parent=gene-D5F92_RS00415;Dbxref=GenBank:WP_001040189.1;Name=WP_001040189.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1;locus_tag=D5F92_RS00415;product=translation initiation factor IF-1;protein_id=WP_001040189.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 62930 63046 . + . ID=gene-D5F92_RS00420;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=D5F92_RS00420;old_locus_tag=D5F92_00420 NZ_QYTJ01000001.1 Protein Homology CDS 62930 63046 . + 0 ID=cds-WP_000868345.1;Parent=gene-D5F92_RS00420;Dbxref=GenBank:WP_000868345.1;Name=WP_000868345.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=D5F92_RS00420;product=50S ribosomal protein L36;protein_id=WP_000868345.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 63064 63429 . + . ID=gene-D5F92_RS00425;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=D5F92_RS00425;old_locus_tag=D5F92_00425 NZ_QYTJ01000001.1 Protein Homology CDS 63064 63429 . + 0 ID=cds-WP_000090785.1;Parent=gene-D5F92_RS00425;Dbxref=GenBank:WP_000090785.1;Name=WP_000090785.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=D5F92_RS00425;product=30S ribosomal protein S13;protein_id=WP_000090785.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 63447 63830 . + . ID=gene-D5F92_RS00430;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=D5F92_RS00430;old_locus_tag=D5F92_00430 NZ_QYTJ01000001.1 Protein Homology CDS 63447 63830 . + 0 ID=cds-WP_001118387.1;Parent=gene-D5F92_RS00430;Dbxref=GenBank:WP_001118387.1;Name=WP_001118387.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=D5F92_RS00430;product=30S ribosomal protein S11;protein_id=WP_001118387.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 63880 64818 . + . ID=gene-D5F92_RS00435;Name=D5F92_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00435;old_locus_tag=D5F92_00435 NZ_QYTJ01000001.1 Protein Homology CDS 63880 64818 . + 0 ID=cds-WP_000568977.1;Parent=gene-D5F92_RS00435;Dbxref=GenBank:WP_000568977.1;Name=WP_000568977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=D5F92_RS00435;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_000568977.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 64833 65219 . + . ID=gene-D5F92_RS00440;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=D5F92_RS00440;old_locus_tag=D5F92_00440 NZ_QYTJ01000001.1 Protein Homology CDS 64833 65219 . + 0 ID=cds-WP_000331497.1;Parent=gene-D5F92_RS00440;Dbxref=GenBank:WP_000331497.1;Name=WP_000331497.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=D5F92_RS00440;product=50S ribosomal protein L17;protein_id=WP_000331497.1;transl_table=11 NZ_QYTJ01000001.1 RefSeq gene 65807 66054 . + . ID=gene-D5F92_RS00445;Name=D5F92_RS00445;end_range=66054,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS00445;old_locus_tag=D5F92_00445;partial=true NZ_QYTJ01000001.1 cmsearch rRNA 65807 66054 . + . ID=rna-D5F92_RS00445;Parent=gene-D5F92_RS00445;Dbxref=RFAM:RF00177;end_range=66054,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00445;partial=true;product=16S ribosomal RNA NZ_QYTJ01000001.1 cmsearch exon 65807 66054 . + . ID=exon-D5F92_RS00445-1;Parent=rna-D5F92_RS00445;Dbxref=RFAM:RF00177;end_range=66054,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS00445;partial=true;product=16S ribosomal RNA ##sequence-region NZ_QYTJ01000010.1 1 19852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000010.1 RefSeq region 1 19852 . + . ID=NZ_QYTJ01000010.1:1..19852;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000010.1 RefSeq gene 1 336 . + . ID=gene-D5F92_RS02055;Name=D5F92_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02055;old_locus_tag=D5F92_02065;partial=true;start_range=.,1 NZ_QYTJ01000010.1 Protein Homology CDS 1 336 . + 0 ID=cds-WP_142996886.1;Parent=gene-D5F92_RS02055;Dbxref=GenBank:WP_142996886.1;Name=WP_142996886.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS02055;partial=true;product=integrase core domain-containing protein;protein_id=WP_142996886.1;start_range=.,1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 490 3072 . - . ID=gene-D5F92_RS02060;Name=D5F92_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02060;old_locus_tag=D5F92_02070 NZ_QYTJ01000010.1 Protein Homology CDS 490 3072 . - 0 ID=cds-WP_086163495.1;Parent=gene-D5F92_RS02060;Dbxref=GenBank:WP_086163495.1;Name=WP_086163495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080375.1;locus_tag=D5F92_RS02060;product=pneumococcal-type histidine triad protein;protein_id=WP_086163495.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 3099 4022 . - . ID=gene-D5F92_RS02065;Name=D5F92_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02065;old_locus_tag=D5F92_02075 NZ_QYTJ01000010.1 Protein Homology CDS 3099 4022 . - 0 ID=cds-WP_000822455.1;Parent=gene-D5F92_RS02065;Dbxref=GenBank:WP_000822455.1;Name=WP_000822455.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822457.1;locus_tag=D5F92_RS02065;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_000822455.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 4277 4720 . - . ID=gene-D5F92_RS02070;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=D5F92_RS02070;old_locus_tag=D5F92_02080 NZ_QYTJ01000010.1 Protein Homology CDS 4277 4720 . - 0 ID=cds-WP_124749413.1;Parent=gene-D5F92_RS02070;Dbxref=GenBank:WP_124749413.1;Name=WP_124749413.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481271.1;locus_tag=D5F92_RS02070;product=D-aminoacyl-tRNA deacylase;protein_id=WP_124749413.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 4730 6946 . - . ID=gene-D5F92_RS02075;Name=D5F92_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02075;old_locus_tag=D5F92_02085 NZ_QYTJ01000010.1 Protein Homology CDS 4730 6946 . - 0 ID=cds-WP_000237872.1;Parent=gene-D5F92_RS02075;Dbxref=GenBank:WP_000237872.1;Name=WP_000237872.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019316080.1;locus_tag=D5F92_RS02075;product=RelA/SpoT family protein;protein_id=WP_000237872.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 7206 9608 . + . ID=gene-D5F92_RS02080;Name=D5F92_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02080;old_locus_tag=D5F92_02090 NZ_QYTJ01000010.1 Protein Homology CDS 7206 9608 . + 0 ID=cds-WP_086163496.1;Parent=gene-D5F92_RS02080;Dbxref=GenBank:WP_086163496.1;Name=WP_086163496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033916.1;locus_tag=D5F92_RS02080;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_086163496.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 9765 10220 . + . ID=gene-D5F92_RS02085;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D5F92_RS02085;old_locus_tag=D5F92_02095 NZ_QYTJ01000010.1 Protein Homology CDS 9765 10220 . + 0 ID=cds-WP_001125401.1;Parent=gene-D5F92_RS02085;Dbxref=GenBank:WP_001125401.1;Name=WP_001125401.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125399.1;locus_tag=D5F92_RS02085;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001125401.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 10231 11268 . + . ID=gene-D5F92_RS02090;Name=D5F92_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02090;old_locus_tag=D5F92_02100 NZ_QYTJ01000010.1 Protein Homology CDS 10231 11268 . + 0 ID=cds-WP_016481273.1;Parent=gene-D5F92_RS02090;Dbxref=GenBank:WP_016481273.1;Name=WP_016481273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450421.1;locus_tag=D5F92_RS02090;product=M42 family metallopeptidase;protein_id=WP_016481273.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 11268 11765 . + . ID=gene-D5F92_RS02095;Name=D5F92_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02095;old_locus_tag=D5F92_02105 NZ_QYTJ01000010.1 Protein Homology CDS 11268 11765 . + 0 ID=cds-WP_124749415.1;Parent=gene-D5F92_RS02095;Dbxref=GenBank:WP_124749415.1;Name=WP_124749415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000226640.1;locus_tag=D5F92_RS02095;product=kinase;protein_id=WP_124749415.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 11987 13024 . - . ID=gene-D5F92_RS02100;Name=D5F92_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02100;old_locus_tag=D5F92_02110 NZ_QYTJ01000010.1 Protein Homology CDS 11987 13024 . - 0 ID=cds-WP_000660657.1;Parent=gene-D5F92_RS02100;Dbxref=GenBank:WP_000660657.1;Name=WP_000660657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660650.1;locus_tag=D5F92_RS02100;product=extracellular solute-binding protein;protein_id=WP_000660657.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 13036 13809 . - . ID=gene-D5F92_RS02105;Name=D5F92_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02105;old_locus_tag=D5F92_02115 NZ_QYTJ01000010.1 Protein Homology CDS 13036 13809 . - 0 ID=cds-WP_000286068.1;Parent=gene-D5F92_RS02105;Dbxref=GenBank:WP_000286068.1;Name=WP_000286068.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286075.1;locus_tag=D5F92_RS02105;product=response regulator transcription factor;protein_id=WP_000286068.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 13813 15462 . - . ID=gene-D5F92_RS02110;Name=D5F92_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02110;old_locus_tag=D5F92_02120 NZ_QYTJ01000010.1 Protein Homology CDS 13813 15462 . - 0 ID=cds-WP_016503275.1;Parent=gene-D5F92_RS02110;Dbxref=GenBank:WP_016503275.1;Name=WP_016503275.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632306.1;locus_tag=D5F92_RS02110;product=sensor histidine kinase;protein_id=WP_016503275.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 15600 16427 . - . ID=gene-D5F92_RS02115;Name=D5F92_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02115;old_locus_tag=D5F92_02125 NZ_QYTJ01000010.1 Protein Homology CDS 15600 16427 . - 0 ID=cds-WP_000841957.1;Parent=gene-D5F92_RS02115;Dbxref=GenBank:WP_000841957.1;Name=WP_000841957.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000841956.1;locus_tag=D5F92_RS02115;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000841957.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 16424 17233 . - . ID=gene-D5F92_RS02120;Name=D5F92_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02120;old_locus_tag=D5F92_02130 NZ_QYTJ01000010.1 Protein Homology CDS 16424 17233 . - 0 ID=cds-WP_000605775.1;Parent=gene-D5F92_RS02120;Dbxref=GenBank:WP_000605775.1;Name=WP_000605775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644846.1;locus_tag=D5F92_RS02120;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000605775.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 17249 17740 . - . ID=gene-D5F92_RS02125;Name=D5F92_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02125;old_locus_tag=D5F92_02135 NZ_QYTJ01000010.1 Protein Homology CDS 17249 17740 . - 0 ID=cds-WP_000632641.1;Parent=gene-D5F92_RS02125;Dbxref=GenBank:WP_000632641.1;Name=WP_000632641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048186.1;locus_tag=D5F92_RS02125;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_000632641.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 17758 18183 . - . ID=gene-D5F92_RS02130;Name=D5F92_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02130;old_locus_tag=D5F92_02140 NZ_QYTJ01000010.1 Protein Homology CDS 17758 18183 . - 0 ID=cds-WP_000823122.1;Parent=gene-D5F92_RS02130;Dbxref=GenBank:WP_000823122.1;Name=WP_000823122.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823118.1;locus_tag=D5F92_RS02130;product=PTS sugar transporter subunit IIA domain-containing protein;protein_id=WP_000823122.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 18430 19464 . - . ID=gene-D5F92_RS02135;Name=D5F92_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02135;old_locus_tag=D5F92_02145 NZ_QYTJ01000010.1 Protein Homology CDS 18430 19464 . - 0 ID=cds-WP_180383440.1;Parent=gene-D5F92_RS02135;Dbxref=GenBank:WP_180383440.1;Name=WP_180383440.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643312.1;locus_tag=D5F92_RS02135;product=acyltransferase family protein;protein_id=WP_180383440.1;transl_table=11 NZ_QYTJ01000010.1 RefSeq gene 19673 19852 . + . ID=gene-D5F92_RS02140;Name=D5F92_RS02140;end_range=19852,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02140;old_locus_tag=D5F92_02150;partial=true NZ_QYTJ01000010.1 Protein Homology CDS 19673 19852 . + 0 ID=cds-WP_086163308.1;Parent=gene-D5F92_RS02140;Dbxref=GenBank:WP_086163308.1;Name=WP_086163308.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=19852,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS02140;partial=true;product=transposase;protein_id=WP_086163308.1;transl_table=11 ##sequence-region NZ_QYTJ01000011.1 1 43610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000011.1 RefSeq region 1 43610 . + . ID=NZ_QYTJ01000011.1:1..43610;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000011.1 RefSeq gene 1 273 . - . ID=gene-D5F92_RS02145;Name=D5F92_RS02145;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS02145;old_locus_tag=D5F92_02155;partial=true;start_range=.,1 NZ_QYTJ01000011.1 cmsearch rRNA 1 273 . - . ID=rna-D5F92_RS02145;Parent=gene-D5F92_RS02145;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02145;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_QYTJ01000011.1 cmsearch exon 1 273 . - . ID=exon-D5F92_RS02145-1;Parent=rna-D5F92_RS02145;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02145;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_QYTJ01000011.1 RefSeq gene 614 1501 . - . ID=gene-D5F92_RS02150;Name=jag;gbkey=Gene;gene=jag;gene_biotype=protein_coding;locus_tag=D5F92_RS02150;old_locus_tag=D5F92_02160 NZ_QYTJ01000011.1 Protein Homology CDS 614 1501 . - 0 ID=cds-WP_446539750.1;Parent=gene-D5F92_RS02150;Dbxref=GenBank:WP_446539750.1;Name=WP_446539750.1;Ontology_term=GO:0003676,GO:0003723;gbkey=CDS;gene=jag;go_function=nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF041568.1;locus_tag=D5F92_RS02150;product=RNA-binding cell elongation regulator Jag/EloR;protein_id=WP_446539750.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 1443 2258 . - . ID=gene-D5F92_RS02155;Name=D5F92_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02155;old_locus_tag=D5F92_02165 NZ_QYTJ01000011.1 Protein Homology CDS 1443 2258 . - 0 ID=cds-WP_000727922.1;Parent=gene-D5F92_RS02155;Dbxref=GenBank:WP_000727922.1;Name=WP_000727922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727922.1;locus_tag=D5F92_RS02155;product=membrane protein insertase YidC;protein_id=WP_000727922.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 2271 2600 . - . ID=gene-D5F92_RS02160;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=D5F92_RS02160;old_locus_tag=D5F92_02170 NZ_QYTJ01000011.1 Protein Homology CDS 2271 2600 . - 0 ID=cds-WP_000754611.1;Parent=gene-D5F92_RS02160;Dbxref=GenBank:WP_000754611.1;Name=WP_000754611.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754613.1;locus_tag=D5F92_RS02160;product=ribonuclease P protein component;protein_id=WP_000754611.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 2770 3786 . + . ID=gene-D5F92_RS02165;Name=D5F92_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02165;old_locus_tag=D5F92_02175 NZ_QYTJ01000011.1 Protein Homology CDS 2770 3786 . + 0 ID=cds-WP_000166107.1;Parent=gene-D5F92_RS02165;Dbxref=GenBank:WP_000166107.1;Name=WP_000166107.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166102.1;locus_tag=D5F92_RS02165;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_000166107.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 3823 4722 . + . ID=gene-D5F92_RS02170;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=D5F92_RS02170;old_locus_tag=D5F92_02180 NZ_QYTJ01000011.1 Protein Homology CDS 3823 4722 . + 0 ID=cds-WP_000868271.1;Parent=gene-D5F92_RS02170;Dbxref=GenBank:WP_000868271.1;Name=WP_000868271.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868270.1;locus_tag=D5F92_RS02170;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000868271.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 4813 5856 . - . ID=gene-D5F92_RS02175;Name=D5F92_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02175;old_locus_tag=D5F92_02185 NZ_QYTJ01000011.1 Protein Homology CDS 4813 5856 . - 0 ID=cds-WP_016502555.1;Parent=gene-D5F92_RS02175;Dbxref=GenBank:WP_016502555.1;Name=WP_016502555.1;Ontology_term=GO:0016020,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019315854.1;locus_tag=D5F92_RS02175;product=BMP family lipoprotein;protein_id=WP_016502555.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 5988 6665 . - . ID=gene-D5F92_RS02180;Name=D5F92_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02180;old_locus_tag=D5F92_02190 NZ_QYTJ01000011.1 Protein Homology CDS 5988 6665 . - 0 ID=cds-WP_016502554.1;Parent=gene-D5F92_RS02180;Dbxref=GenBank:WP_016502554.1;Name=WP_016502554.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480347.1;locus_tag=D5F92_RS02180;product=rhomboid family intramembrane serine protease;protein_id=WP_016502554.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 6656 7183 . - . ID=gene-D5F92_RS02185;Name=D5F92_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02185;old_locus_tag=D5F92_02195 NZ_QYTJ01000011.1 Protein Homology CDS 6656 7183 . - 0 ID=cds-WP_124749597.1;Parent=gene-D5F92_RS02185;Dbxref=GenBank:WP_124749597.1;Name=WP_124749597.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058375.1;locus_tag=D5F92_RS02185;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_124749597.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 7505 8854 . - . ID=gene-D5F92_RS02190;Name=D5F92_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02190;old_locus_tag=D5F92_02200 NZ_QYTJ01000011.1 Protein Homology CDS 7505 8854 . - 0 ID=cds-WP_000148892.1;Parent=gene-D5F92_RS02190;Dbxref=GenBank:WP_000148892.1;Name=WP_000148892.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648691.1;locus_tag=D5F92_RS02190;product=glucose-6-phosphate isomerase;protein_id=WP_000148892.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 9006 9091 . - . ID=gene-D5F92_RS02195;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=D5F92_RS02195;old_locus_tag=D5F92_02205 NZ_QYTJ01000011.1 cmsearch SRP_RNA 9006 9091 . - . ID=rna-D5F92_RS02195;Parent=gene-D5F92_RS02195;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02195;product=signal recognition particle sRNA small type NZ_QYTJ01000011.1 cmsearch exon 9006 9091 . - . ID=exon-D5F92_RS02195-1;Parent=rna-D5F92_RS02195;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02195;product=signal recognition particle sRNA small type NZ_QYTJ01000011.1 RefSeq gene 9126 9632 . - . ID=gene-D5F92_RS02200;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=D5F92_RS02200;old_locus_tag=D5F92_02210 NZ_QYTJ01000011.1 Protein Homology CDS 9126 9632 . - 0 ID=cds-WP_016502553.1;Parent=gene-D5F92_RS02200;Dbxref=GenBank:WP_016502553.1;Name=WP_016502553.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169006.1;locus_tag=D5F92_RS02200;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_016502553.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 9632 10408 . - . ID=gene-D5F92_RS02205;Name=D5F92_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02205;old_locus_tag=D5F92_02215 NZ_QYTJ01000011.1 Protein Homology CDS 9632 10408 . - 0 ID=cds-WP_000779461.1;Parent=gene-D5F92_RS02205;Dbxref=GenBank:WP_000779461.1;Name=WP_000779461.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932415.1;locus_tag=D5F92_RS02205;product=MBL fold metallo-hydrolase;protein_id=WP_000779461.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 10547 11086 . - . ID=gene-D5F92_RS02210;Name=D5F92_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02210;old_locus_tag=D5F92_02220 NZ_QYTJ01000011.1 Protein Homology CDS 10547 11086 . - 0 ID=cds-WP_000469147.1;Parent=gene-D5F92_RS02210;Dbxref=GenBank:WP_000469147.1;Name=WP_000469147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469150.1;locus_tag=D5F92_RS02210;product=biotin transporter BioY;protein_id=WP_000469147.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 11093 11404 . - . ID=gene-D5F92_RS02215;Name=D5F92_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02215;old_locus_tag=D5F92_02225 NZ_QYTJ01000011.1 Protein Homology CDS 11093 11404 . - 0 ID=cds-WP_165851450.1;Parent=gene-D5F92_RS02215;Dbxref=GenBank:WP_165851450.1;Name=WP_165851450.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983195.1;locus_tag=D5F92_RS02215;product=CHY zinc finger protein;protein_id=WP_165851450.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 11510 12652 . - . ID=gene-D5F92_RS02220;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=D5F92_RS02220;old_locus_tag=D5F92_02230 NZ_QYTJ01000011.1 Protein Homology CDS 11510 12652 . - 0 ID=cds-WP_000129511.1;Parent=gene-D5F92_RS02220;Dbxref=GenBank:WP_000129511.1;Name=WP_000129511.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184131.1;locus_tag=D5F92_RS02220;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000129511.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 12839 13579 . + . ID=gene-D5F92_RS02225;Name=D5F92_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02225;old_locus_tag=D5F92_02235 NZ_QYTJ01000011.1 Protein Homology CDS 12839 13579 . + 0 ID=cds-WP_086163237.1;Parent=gene-D5F92_RS02225;Dbxref=GenBank:WP_086163237.1;Name=WP_086163237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631700.1;locus_tag=D5F92_RS02225;product=DUF975 family protein;protein_id=WP_086163237.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 13593 14630 . - . ID=gene-D5F92_RS02230;Name=D5F92_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02230;old_locus_tag=D5F92_02240 NZ_QYTJ01000011.1 Protein Homology CDS 13593 14630 . - 0 ID=cds-WP_000770244.1;Parent=gene-D5F92_RS02230;Dbxref=GenBank:WP_000770244.1;Name=WP_000770244.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770238.1;locus_tag=D5F92_RS02230;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_000770244.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 14632 15318 . - . ID=gene-D5F92_RS02235;Name=D5F92_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02235;old_locus_tag=D5F92_02245 NZ_QYTJ01000011.1 Protein Homology CDS 14632 15318 . - 0 ID=cds-WP_000192298.1;Parent=gene-D5F92_RS02235;Dbxref=GenBank:WP_000192298.1;Name=WP_000192298.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631698.1;locus_tag=D5F92_RS02235;product=response regulator transcription factor;protein_id=WP_000192298.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 15431 16996 . - . ID=gene-D5F92_RS02240;Name=pbsP;gbkey=Gene;gene=pbsP;gene_biotype=protein_coding;locus_tag=D5F92_RS02240;old_locus_tag=D5F92_02250 NZ_QYTJ01000011.1 Protein Homology CDS 15431 16996 . - 0 ID=cds-WP_086163236.1;Parent=gene-D5F92_RS02240;Dbxref=GenBank:WP_086163236.1;Name=WP_086163236.1;gbkey=CDS;gene=pbsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703866.1;locus_tag=D5F92_RS02240;product=plasminogen-binding protein PbsP;protein_id=WP_086163236.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 17149 17628 . - . ID=gene-D5F92_RS02245;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=D5F92_RS02245;old_locus_tag=D5F92_02255 NZ_QYTJ01000011.1 Protein Homology CDS 17149 17628 . - 0 ID=cds-WP_000377090.1;Parent=gene-D5F92_RS02245;Dbxref=GenBank:WP_000377090.1;Name=WP_000377090.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377090.1;locus_tag=D5F92_RS02245;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_000377090.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 17710 18150 . - . ID=gene-D5F92_RS02250;Name=D5F92_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02250;old_locus_tag=D5F92_02260 NZ_QYTJ01000011.1 Protein Homology CDS 17710 18150 . - 0 ID=cds-WP_000262488.1;Parent=gene-D5F92_RS02250;Dbxref=GenBank:WP_000262488.1;Name=WP_000262488.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262488.1;locus_tag=D5F92_RS02250;product=CoA-binding protein;protein_id=WP_000262488.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 18180 20822 . - . ID=gene-D5F92_RS02255;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=D5F92_RS02255;old_locus_tag=D5F92_02265 NZ_QYTJ01000011.1 Protein Homology CDS 18180 20822 . - 0 ID=cds-WP_016502549.1;Parent=gene-D5F92_RS02255;Dbxref=GenBank:WP_016502549.1;Name=WP_016502549.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019314525.1;locus_tag=D5F92_RS02255;product=DNA polymerase I;protein_id=WP_016502549.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 20935 21747 . - . ID=gene-D5F92_RS02260;Name=D5F92_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02260;old_locus_tag=D5F92_02270 NZ_QYTJ01000011.1 Protein Homology CDS 20935 21747 . - 0 ID=cds-WP_000593333.1;Parent=gene-D5F92_RS02260;Dbxref=GenBank:WP_000593333.1;Name=WP_000593333.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593337.1;locus_tag=D5F92_RS02260;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000593333.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 21762 22376 . - . ID=gene-D5F92_RS02265;Name=D5F92_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02265;old_locus_tag=D5F92_02275 NZ_QYTJ01000011.1 Protein Homology CDS 21762 22376 . - 0 ID=cds-WP_016502548.1;Parent=gene-D5F92_RS02265;Dbxref=GenBank:WP_016502548.1;Name=WP_016502548.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020717.1;locus_tag=D5F92_RS02265;product=trimeric intracellular cation channel family protein;protein_id=WP_016502548.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 22486 22692 . - . ID=gene-D5F92_RS02270;Name=D5F92_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02270;old_locus_tag=D5F92_02280 NZ_QYTJ01000011.1 Protein Homology CDS 22486 22692 . - 0 ID=cds-WP_016502547.1;Parent=gene-D5F92_RS02270;Dbxref=GenBank:WP_016502547.1;Name=WP_016502547.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683378.1;locus_tag=D5F92_RS02270;product=heavy-metal-associated domain-containing protein;protein_id=WP_016502547.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 22733 24967 . - . ID=gene-D5F92_RS02275;Name=D5F92_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02275;old_locus_tag=D5F92_02285 NZ_QYTJ01000011.1 Protein Homology CDS 22733 24967 . - 0 ID=cds-WP_086163234.1;Parent=gene-D5F92_RS02275;Dbxref=GenBank:WP_086163234.1;Name=WP_086163234.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013403.1;locus_tag=D5F92_RS02275;product=heavy metal translocating P-type ATPase;protein_id=WP_086163234.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 24980 25396 . - . ID=gene-D5F92_RS02280;Name=D5F92_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02280;old_locus_tag=D5F92_02290 NZ_QYTJ01000011.1 Protein Homology CDS 24980 25396 . - 0 ID=cds-WP_016502544.1;Parent=gene-D5F92_RS02280;Dbxref=GenBank:WP_016502544.1;Name=WP_016502544.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647024.1;locus_tag=D5F92_RS02280;product=CopY/TcrY family copper transport repressor;protein_id=WP_016502544.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 25559 26563 . + . ID=gene-D5F92_RS02285;Name=D5F92_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02285;old_locus_tag=D5F92_02295 NZ_QYTJ01000011.1 Protein Homology CDS 25559 26563 . + 0 ID=cds-WP_000804611.1;Parent=gene-D5F92_RS02285;Dbxref=GenBank:WP_000804611.1;Name=WP_000804611.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649252.1;locus_tag=D5F92_RS02285;product=alpha/beta hydrolase;protein_id=WP_000804611.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 26648 26998 . - . ID=gene-D5F92_RS02290;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=D5F92_RS02290;old_locus_tag=D5F92_02300 NZ_QYTJ01000011.1 Protein Homology CDS 26648 26998 . - 0 ID=cds-WP_001273670.1;Parent=gene-D5F92_RS02290;Dbxref=GenBank:WP_001273670.1;Name=WP_001273670.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273670.1;locus_tag=D5F92_RS02290;product=30S ribosome-binding factor RbfA;protein_id=WP_001273670.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq pseudogene 27107 29614 . - . ID=gene-D5F92_RS02295;Name=infB;end_range=29614,.;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=D5F92_RS02295;old_locus_tag=D5F92_02305;partial=true;pseudo=true NZ_QYTJ01000011.1 Protein Homology CDS 27107 29614 . - 0 ID=cds-D5F92_RS02295;Parent=gene-D5F92_RS02295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;end_range=29614,.;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381344.1;locus_tag=D5F92_RS02295;partial=true;product=translation initiation factor IF-2;pseudo=true;transl_table=11 NZ_QYTJ01000011.1 RefSeq pseudogene 29708 29890 . - . ID=gene-D5F92_RS11555;Name=D5F92_RS11555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11555;partial=true;pseudo=true;start_range=.,29708 NZ_QYTJ01000011.1 Protein Homology CDS 29708 29890 . - 0 ID=cds-D5F92_RS11555;Parent=gene-D5F92_RS11555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739827.1;locus_tag=D5F92_RS11555;partial=true;product=translation initiation factor IF-2 N-terminal domain-containing protein;pseudo=true;start_range=.,29708;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 29910 30212 . - . ID=gene-D5F92_RS02300;Name=D5F92_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02300;old_locus_tag=D5F92_02310 NZ_QYTJ01000011.1 Protein Homology CDS 29910 30212 . - 0 ID=cds-WP_001065560.1;Parent=gene-D5F92_RS02300;Dbxref=GenBank:WP_001065560.1;Name=WP_001065560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065560.1;locus_tag=D5F92_RS02300;product=YlxQ-related RNA-binding protein;protein_id=WP_001065560.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 30205 30501 . - . ID=gene-D5F92_RS02305;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=D5F92_RS02305;old_locus_tag=D5F92_02315 NZ_QYTJ01000011.1 Protein Homology CDS 30205 30501 . - 0 ID=cds-WP_001140526.1;Parent=gene-D5F92_RS02305;Dbxref=GenBank:WP_001140526.1;Name=WP_001140526.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006531117.1;locus_tag=D5F92_RS02305;product=RNase P modulator RnpM;protein_id=WP_001140526.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 30523 31674 . - . ID=gene-D5F92_RS02310;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=D5F92_RS02310;old_locus_tag=D5F92_02320 NZ_QYTJ01000011.1 Protein Homology CDS 30523 31674 . - 0 ID=cds-WP_000032295.1;Parent=gene-D5F92_RS02310;Dbxref=GenBank:WP_000032295.1;Name=WP_000032295.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032296.1;locus_tag=D5F92_RS02310;product=transcription termination factor NusA;protein_id=WP_000032295.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 31710 32186 . - . ID=gene-D5F92_RS02315;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=D5F92_RS02315;old_locus_tag=D5F92_02325 NZ_QYTJ01000011.1 Protein Homology CDS 31710 32186 . - 0 ID=cds-WP_124749593.1;Parent=gene-D5F92_RS02315;Dbxref=GenBank:WP_124749593.1;Name=WP_124749593.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018366632.1;locus_tag=D5F92_RS02315;product=ribosome maturation factor RimP;protein_id=WP_124749593.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 32687 33973 . - . ID=gene-D5F92_RS02320;Name=D5F92_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02320;old_locus_tag=D5F92_02330 NZ_QYTJ01000011.1 Protein Homology CDS 32687 33973 . - 0 ID=cds-WP_180383432.1;Parent=gene-D5F92_RS02320;Dbxref=GenBank:WP_180383432.1;Name=WP_180383432.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768291.1;locus_tag=D5F92_RS02320;product=ISLre2 family transposase;protein_id=WP_180383432.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 34139 34318 . - . ID=gene-D5F92_RS02325;Name=D5F92_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02325;old_locus_tag=D5F92_02335 NZ_QYTJ01000011.1 Protein Homology CDS 34139 34318 . - 0 ID=cds-WP_000520534.1;Parent=gene-D5F92_RS02325;Dbxref=GenBank:WP_000520534.1;Name=WP_000520534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520534.1;locus_tag=D5F92_RS02325;product=DUF7679 family protein;protein_id=WP_000520534.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 34413 35012 . - . ID=gene-D5F92_RS02330;Name=D5F92_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02330;old_locus_tag=D5F92_02340 NZ_QYTJ01000011.1 Protein Homology CDS 34413 35012 . - 0 ID=cds-WP_124749591.1;Parent=gene-D5F92_RS02330;Dbxref=GenBank:WP_124749591.1;Name=WP_124749591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020213.1;locus_tag=D5F92_RS02330;product=hypothetical protein;protein_id=WP_124749591.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 35027 36673 . - . ID=gene-D5F92_RS02335;Name=D5F92_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02335;old_locus_tag=D5F92_02345 NZ_QYTJ01000011.1 Protein Homology CDS 35027 36673 . - 0 ID=cds-WP_124759312.1;Parent=gene-D5F92_RS02335;Dbxref=GenBank:WP_124759312.1;Name=WP_124759312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794515.1;locus_tag=D5F92_RS02335;product=helical hairpin domain-containing protein;protein_id=WP_124759312.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 36667 37062 . - . ID=gene-D5F92_RS02340;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=D5F92_RS02340;old_locus_tag=D5F92_02350 NZ_QYTJ01000011.1 Protein Homology CDS 36667 37062 . - 0 ID=cds-WP_124749587.1;Parent=gene-D5F92_RS02340;Dbxref=GenBank:WP_124749587.1;Name=WP_124749587.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378818.1;locus_tag=D5F92_RS02340;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_124749587.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 37246 37683 . - . ID=gene-D5F92_RS02345;Name=D5F92_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02345;old_locus_tag=D5F92_02355 NZ_QYTJ01000011.1 Protein Homology CDS 37246 37683 . - 0 ID=cds-WP_124749585.1;Parent=gene-D5F92_RS02345;Dbxref=GenBank:WP_124749585.1;Name=WP_124749585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008174.1;locus_tag=D5F92_RS02345;product=hypothetical protein;protein_id=WP_124749585.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 37754 40885 . - . ID=gene-D5F92_RS02350;Name=D5F92_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02350;old_locus_tag=D5F92_02360 NZ_QYTJ01000011.1 Protein Homology CDS 37754 40885 . - 0 ID=cds-WP_124749583.1;Parent=gene-D5F92_RS02350;Dbxref=GenBank:WP_124749583.1;Name=WP_124749583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378820.1;locus_tag=D5F92_RS02350;product=PBECR4 domain-containing protein;protein_id=WP_124749583.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 40887 41141 . - . ID=gene-D5F92_RS02355;Name=D5F92_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02355;old_locus_tag=D5F92_02365 NZ_QYTJ01000011.1 Protein Homology CDS 40887 41141 . - 0 ID=cds-WP_124749599.1;Parent=gene-D5F92_RS02355;Dbxref=GenBank:WP_124749599.1;Name=WP_124749599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794519.1;locus_tag=D5F92_RS02355;product=hypothetical protein;protein_id=WP_124749599.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 41166 42977 . - . ID=gene-D5F92_RS02360;Name=D5F92_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02360;old_locus_tag=D5F92_02370 NZ_QYTJ01000011.1 Protein Homology CDS 41166 42977 . - 0 ID=cds-WP_124759311.1;Parent=gene-D5F92_RS02360;Dbxref=GenBank:WP_124759311.1;Name=WP_124759311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197180.1;locus_tag=D5F92_RS02360;product=VirD4-like conjugal transfer protein%2C CD1115 family;protein_id=WP_124759311.1;transl_table=11 NZ_QYTJ01000011.1 RefSeq gene 42974 43492 . - . ID=gene-D5F92_RS02365;Name=D5F92_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02365;old_locus_tag=D5F92_02375 NZ_QYTJ01000011.1 Protein Homology CDS 42974 43492 . - 0 ID=cds-WP_124749579.1;Parent=gene-D5F92_RS02365;Dbxref=GenBank:WP_124749579.1;Name=WP_124749579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088851.1;locus_tag=D5F92_RS02365;product=hypothetical protein;protein_id=WP_124749579.1;transl_table=11 ##sequence-region NZ_QYTJ01000012.1 1 26696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000012.1 RefSeq region 1 26696 . + . ID=NZ_QYTJ01000012.1:1..26696;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000012.1 RefSeq gene 1 245 . - . ID=gene-D5F92_RS02370;Name=D5F92_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02370;old_locus_tag=D5F92_02380;partial=true;start_range=.,1 NZ_QYTJ01000012.1 Protein Homology CDS 1 245 . - 0 ID=cds-WP_124785419.1;Parent=gene-D5F92_RS02370;Dbxref=GenBank:WP_124785419.1;Name=WP_124785419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731528.1;locus_tag=D5F92_RS02370;partial=true;product=DUF1310 family protein;protein_id=WP_124785419.1;start_range=.,1;transl_table=11 NZ_QYTJ01000012.1 RefSeq pseudogene 345 635 . - . ID=gene-D5F92_RS02375;Name=D5F92_RS02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02375;old_locus_tag=D5F92_02385;pseudo=true NZ_QYTJ01000012.1 Protein Homology CDS 345 635 . - 0 ID=cds-D5F92_RS02375;Parent=gene-D5F92_RS02375;Note=internal stop;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646948.1;locus_tag=D5F92_RS02375;product=WXG100 family type VII secretion target;pseudo=true;transl_table=11 NZ_QYTJ01000012.1 RefSeq pseudogene 957 1121 . - . ID=gene-D5F92_RS11465;Name=D5F92_RS11465;end_range=1121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11465;old_locus_tag=D5F92_02390;partial=true;pseudo=true;start_range=.,957 NZ_QYTJ01000012.1 Protein Homology CDS 957 1121 . - 0 ID=cds-D5F92_RS11465;Parent=gene-D5F92_RS11465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794614.1;locus_tag=D5F92_RS11465;partial=true;product=site-specific integrase;pseudo=true;start_range=.,957;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 1076 1204 . - . ID=gene-D5F92_RS11375;Name=D5F92_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11375 NZ_QYTJ01000012.1 Protein Homology CDS 1076 1204 . - 0 ID=cds-WP_000562552.1;Parent=gene-D5F92_RS11375;Dbxref=GenBank:WP_000562552.1;Name=WP_000562552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001903830.1;locus_tag=D5F92_RS11375;product=hypothetical protein;protein_id=WP_000562552.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 1253 1570 . - . ID=gene-D5F92_RS02385;Name=D5F92_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02385;old_locus_tag=D5F92_02395 NZ_QYTJ01000012.1 Protein Homology CDS 1253 1570 . - 0 ID=cds-WP_000134167.1;Parent=gene-D5F92_RS02385;Dbxref=GenBank:WP_000134167.1;Name=WP_000134167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134166.1;locus_tag=D5F92_RS02385;product=hypothetical protein;protein_id=WP_000134167.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 1579 1716 . - . ID=gene-D5F92_RS11275;Name=D5F92_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11275 NZ_QYTJ01000012.1 GeneMarkS-2+ CDS 1579 1716 . - 0 ID=cds-WP_162471061.1;Parent=gene-D5F92_RS11275;Dbxref=GenBank:WP_162471061.1;Name=WP_162471061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS11275;product=hypothetical protein;protein_id=WP_162471061.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 2629 2961 . + . ID=gene-D5F92_RS02390;Name=D5F92_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02390;old_locus_tag=D5F92_02400 NZ_QYTJ01000012.1 Protein Homology CDS 2629 2961 . + 0 ID=cds-WP_000792756.1;Parent=gene-D5F92_RS02390;Dbxref=GenBank:WP_000792756.1;Name=WP_000792756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000792761.1;locus_tag=D5F92_RS02390;product=hypothetical protein;protein_id=WP_000792756.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 2963 4171 . + . ID=gene-D5F92_RS11520;Name=D5F92_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11520;old_locus_tag=D5F92_02405 NZ_QYTJ01000012.1 Protein Homology CDS 2963 4171 . + 0 ID=cds-WP_000622526.1;Parent=gene-D5F92_RS11520;Dbxref=GenBank:WP_000622526.1;Name=WP_000622526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622530.1;locus_tag=D5F92_RS11520;product=hypothetical protein;protein_id=WP_000622526.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 4159 4560 . + . ID=gene-D5F92_RS02400;Name=D5F92_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02400;old_locus_tag=D5F92_02410 NZ_QYTJ01000012.1 Protein Homology CDS 4159 4560 . + 0 ID=cds-WP_000517024.1;Parent=gene-D5F92_RS02400;Dbxref=GenBank:WP_000517024.1;Name=WP_000517024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517024.1;locus_tag=D5F92_RS02400;product=hypothetical protein;protein_id=WP_000517024.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 4544 4849 . + . ID=gene-D5F92_RS02405;Name=D5F92_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02405;old_locus_tag=D5F92_02415 NZ_QYTJ01000012.1 Protein Homology CDS 4544 4849 . + 0 ID=cds-WP_000511798.1;Parent=gene-D5F92_RS02405;Dbxref=GenBank:WP_000511798.1;Name=WP_000511798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511796.1;locus_tag=D5F92_RS02405;product=hypothetical protein;protein_id=WP_000511798.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 5038 5110 . - . ID=gene-D5F92_RS02410;Name=D5F92_RS02410;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02410;old_locus_tag=D5F92_02420 NZ_QYTJ01000012.1 tRNAscan-SE tRNA 5038 5110 . - . ID=rna-D5F92_RS02410;Parent=gene-D5F92_RS02410;anticodon=(pos:complement(5075..5077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02410;product=tRNA-Lys NZ_QYTJ01000012.1 tRNAscan-SE exon 5038 5110 . - . ID=exon-D5F92_RS02410-1;Parent=rna-D5F92_RS02410;anticodon=(pos:complement(5075..5077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02410;product=tRNA-Lys NZ_QYTJ01000012.1 RefSeq gene 5111 5303 . - . ID=gene-D5F92_RS11560;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=D5F92_RS11560;old_locus_tag=D5F92_02425 NZ_QYTJ01000012.1 cmsearch ncRNA 5111 5303 . - . ID=rna-D5F92_RS11560;Parent=gene-D5F92_RS11560;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11560;product=6S RNA NZ_QYTJ01000012.1 cmsearch exon 5111 5303 . - . ID=exon-D5F92_RS11560-1;Parent=rna-D5F92_RS11560;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11560;product=6S RNA NZ_QYTJ01000012.1 RefSeq gene 5373 6641 . - . ID=gene-D5F92_RS02420;Name=D5F92_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02420;old_locus_tag=D5F92_02430 NZ_QYTJ01000012.1 Protein Homology CDS 5373 6641 . - 0 ID=cds-WP_016503296.1;Parent=gene-D5F92_RS02420;Dbxref=GenBank:WP_016503296.1;Name=WP_016503296.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774759.1;locus_tag=D5F92_RS02420;product=replication-associated recombination protein A;protein_id=WP_016503296.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 6634 7125 . - . ID=gene-D5F92_RS02425;Name=D5F92_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02425;old_locus_tag=D5F92_02435 NZ_QYTJ01000012.1 Protein Homology CDS 6634 7125 . - 0 ID=cds-WP_001879696.1;Parent=gene-D5F92_RS02425;Dbxref=GenBank:WP_001879696.1;Name=WP_001879696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001879696.1;locus_tag=D5F92_RS02425;product=GNAT family N-acetyltransferase;protein_id=WP_001879696.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 7730 7918 . + . ID=gene-D5F92_RS02430;Name=D5F92_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02430;old_locus_tag=D5F92_02440 NZ_QYTJ01000012.1 Protein Homology CDS 7730 7918 . + 0 ID=cds-WP_001082462.1;Parent=gene-D5F92_RS02430;Dbxref=GenBank:WP_001082462.1;Name=WP_001082462.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082465.1;locus_tag=D5F92_RS02430;product=helix-turn-helix transcriptional regulator;protein_id=WP_001082462.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 7921 8448 . + . ID=gene-D5F92_RS02435;Name=D5F92_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02435;old_locus_tag=D5F92_02445 NZ_QYTJ01000012.1 Protein Homology CDS 7921 8448 . + 0 ID=cds-WP_124749328.1;Parent=gene-D5F92_RS02435;Dbxref=GenBank:WP_124749328.1;Name=WP_124749328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031088.1;locus_tag=D5F92_RS02435;product=DUF3278 domain-containing protein;protein_id=WP_124749328.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 8522 8992 . + . ID=gene-D5F92_RS02440;Name=D5F92_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02440;old_locus_tag=D5F92_02450 NZ_QYTJ01000012.1 Protein Homology CDS 8522 8992 . + 0 ID=cds-WP_016503293.1;Parent=gene-D5F92_RS02440;Dbxref=GenBank:WP_016503293.1;Name=WP_016503293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771424.1;locus_tag=D5F92_RS02440;product=DUF3013 family protein;protein_id=WP_016503293.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 9035 9343 . + . ID=gene-D5F92_RS11280;Name=D5F92_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11280 NZ_QYTJ01000012.1 Protein Homology CDS 9035 9343 . + 0 ID=cds-WP_001868493.1;Parent=gene-D5F92_RS11280;Dbxref=GenBank:WP_001868493.1;Name=WP_001868493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001868493.1;locus_tag=D5F92_RS11280;product=hypothetical protein;protein_id=WP_001868493.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 9336 9794 . + . ID=gene-D5F92_RS02450;Name=D5F92_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02450;old_locus_tag=D5F92_02460 NZ_QYTJ01000012.1 Protein Homology CDS 9336 9794 . + 0 ID=cds-WP_000376720.1;Parent=gene-D5F92_RS02450;Dbxref=GenBank:WP_000376720.1;Name=WP_000376720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350740.1;locus_tag=D5F92_RS02450;product=NUDIX hydrolase;protein_id=WP_000376720.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 9766 10236 . + . ID=gene-D5F92_RS02455;Name=D5F92_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02455;old_locus_tag=D5F92_02465 NZ_QYTJ01000012.1 Protein Homology CDS 9766 10236 . + 0 ID=cds-WP_000631751.1;Parent=gene-D5F92_RS02455;Dbxref=GenBank:WP_000631751.1;Name=WP_000631751.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644311.1;locus_tag=D5F92_RS02455;product=GNAT family N-acetyltransferase;protein_id=WP_000631751.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 10275 10991 . - . ID=gene-D5F92_RS02460;Name=D5F92_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02460;old_locus_tag=D5F92_02470 NZ_QYTJ01000012.1 Protein Homology CDS 10275 10991 . - 0 ID=cds-WP_000859570.1;Parent=gene-D5F92_RS02460;Dbxref=GenBank:WP_000859570.1;Name=WP_000859570.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481292.1;locus_tag=D5F92_RS02460;product=MerR family transcriptional regulator;protein_id=WP_000859570.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 11121 11573 . + . ID=gene-D5F92_RS02465;Name=D5F92_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02465;old_locus_tag=D5F92_02475 NZ_QYTJ01000012.1 Protein Homology CDS 11121 11573 . + 0 ID=cds-WP_257638807.1;Parent=gene-D5F92_RS02465;Dbxref=GenBank:WP_257638807.1;Name=WP_257638807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020451.6;locus_tag=D5F92_RS02465;product=MepB family protein;protein_id=WP_257638807.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 11570 12523 . + . ID=gene-D5F92_RS02470;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=D5F92_RS02470;old_locus_tag=D5F92_02480 NZ_QYTJ01000012.1 Protein Homology CDS 11570 12523 . + 0 ID=cds-WP_016503290.1;Parent=gene-D5F92_RS02470;Dbxref=GenBank:WP_016503290.1;Name=WP_016503290.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011225343.1;locus_tag=D5F92_RS02470;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_016503290.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 12523 13263 . + . ID=gene-D5F92_RS02475;Name=D5F92_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02475;old_locus_tag=D5F92_02485 NZ_QYTJ01000012.1 Protein Homology CDS 12523 13263 . + 0 ID=cds-WP_016503289.1;Parent=gene-D5F92_RS02475;Dbxref=GenBank:WP_016503289.1;Name=WP_016503289.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188249.1;locus_tag=D5F92_RS02475;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_016503289.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 13260 13820 . + . ID=gene-D5F92_RS02480;Name=D5F92_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02480;old_locus_tag=D5F92_02490 NZ_QYTJ01000012.1 Protein Homology CDS 13260 13820 . + 0 ID=cds-WP_016503288.1;Parent=gene-D5F92_RS02480;Dbxref=GenBank:WP_016503288.1;Name=WP_016503288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582351.1;locus_tag=D5F92_RS02480;product=AAA family ATPase;protein_id=WP_016503288.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 13950 14831 . + . ID=gene-D5F92_RS02485;Name=D5F92_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02485;old_locus_tag=D5F92_02495 NZ_QYTJ01000012.1 Protein Homology CDS 13950 14831 . + 0 ID=cds-WP_000716331.1;Parent=gene-D5F92_RS02485;Dbxref=GenBank:WP_000716331.1;Name=WP_000716331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716337.1;locus_tag=D5F92_RS02485;product=substrate-binding domain-containing protein;protein_id=WP_000716331.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 14846 15691 . + . ID=gene-D5F92_RS02490;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D5F92_RS02490;old_locus_tag=D5F92_02500 NZ_QYTJ01000012.1 Protein Homology CDS 14846 15691 . + 0 ID=cds-WP_000814831.1;Parent=gene-D5F92_RS02490;Dbxref=GenBank:WP_000814831.1;Name=WP_000814831.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481285.1;locus_tag=D5F92_RS02490;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_000814831.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 15693 16571 . + . ID=gene-D5F92_RS02495;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D5F92_RS02495;old_locus_tag=D5F92_02505 NZ_QYTJ01000012.1 Protein Homology CDS 15693 16571 . + 0 ID=cds-WP_000427916.1;Parent=gene-D5F92_RS02495;Dbxref=GenBank:WP_000427916.1;Name=WP_000427916.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427916.1;locus_tag=D5F92_RS02495;product=phosphate ABC transporter permease PstA;protein_id=WP_000427916.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 16564 17313 . + . ID=gene-D5F92_RS02500;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F92_RS02500;old_locus_tag=D5F92_02510 NZ_QYTJ01000012.1 Protein Homology CDS 16564 17313 . + 0 ID=cds-WP_016503286.1;Parent=gene-D5F92_RS02500;Dbxref=GenBank:WP_016503286.1;Name=WP_016503286.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041123.1;locus_tag=D5F92_RS02500;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_016503286.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 17310 17966 . + . ID=gene-D5F92_RS02505;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=D5F92_RS02505;old_locus_tag=D5F92_02515 NZ_QYTJ01000012.1 Protein Homology CDS 17310 17966 . + 0 ID=cds-WP_000621377.1;Parent=gene-D5F92_RS02505;Dbxref=GenBank:WP_000621377.1;Name=WP_000621377.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621378.1;locus_tag=D5F92_RS02505;product=phosphate signaling complex protein PhoU;protein_id=WP_000621377.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 17966 18643 . + . ID=gene-D5F92_RS02510;Name=D5F92_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02510;old_locus_tag=D5F92_02520 NZ_QYTJ01000012.1 Protein Homology CDS 17966 18643 . + 0 ID=cds-WP_000638643.1;Parent=gene-D5F92_RS02510;Dbxref=GenBank:WP_000638643.1;Name=WP_000638643.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001931721.1;locus_tag=D5F92_RS02510;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000638643.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 18636 20291 . + . ID=gene-D5F92_RS02515;Name=D5F92_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02515;old_locus_tag=D5F92_02525 NZ_QYTJ01000012.1 Protein Homology CDS 18636 20291 . + 0 ID=cds-WP_016503285.1;Parent=gene-D5F92_RS02515;Dbxref=GenBank:WP_016503285.1;Name=WP_016503285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162297.1;locus_tag=D5F92_RS02515;product=sensor histidine kinase;protein_id=WP_016503285.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 20449 22629 . + . ID=gene-D5F92_RS02520;Name=D5F92_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02520;old_locus_tag=D5F92_02530 NZ_QYTJ01000012.1 Protein Homology CDS 20449 22629 . + 0 ID=cds-WP_016481282.1;Parent=gene-D5F92_RS02520;Dbxref=GenBank:WP_016481282.1;Name=WP_016481282.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795069.1;locus_tag=D5F92_RS02520;product=PTS transporter subunit IIBC;protein_id=WP_016481282.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 22683 23498 . + . ID=gene-D5F92_RS02525;Name=D5F92_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02525;old_locus_tag=D5F92_02535 NZ_QYTJ01000012.1 Protein Homology CDS 22683 23498 . + 0 ID=cds-WP_016481281.1;Parent=gene-D5F92_RS02525;Dbxref=GenBank:WP_016481281.1;Name=WP_016481281.1;Ontology_term=GO:0003677,GO:0016787,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029870.1;locus_tag=D5F92_RS02525;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_016481281.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq pseudogene 23714 24301 . + . ID=gene-D5F92_RS02535;Name=D5F92_RS02535;end_range=24301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02535;old_locus_tag=D5F92_02545;partial=true;pseudo=true NZ_QYTJ01000012.1 Protein Homology CDS 23714 24301 . + 0 ID=cds-D5F92_RS02535;Parent=gene-D5F92_RS02535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;end_range=24301,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650163.1;locus_tag=D5F92_RS02535;partial=true;product=response regulator;pseudo=true;transl_table=11 NZ_QYTJ01000012.1 RefSeq pseudogene 24265 25236 . + . ID=gene-D5F92_RS02540;Name=D5F92_RS02540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02540;old_locus_tag=D5F92_02550;partial=true;pseudo=true;start_range=.,24265 NZ_QYTJ01000012.1 Protein Homology CDS 24265 25236 . + 0 ID=cds-D5F92_RS02540;Parent=gene-D5F92_RS02540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089363.1;locus_tag=D5F92_RS02540;partial=true;product=sensor histidine kinase;pseudo=true;start_range=.,24265;transl_table=11 NZ_QYTJ01000012.1 RefSeq pseudogene 25325 25489 . - . ID=gene-D5F92_RS02545;Name=D5F92_RS02545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02545;old_locus_tag=D5F92_02555;partial=true;pseudo=true;start_range=.,25325 NZ_QYTJ01000012.1 Protein Homology CDS 25325 25489 . - 0 ID=cds-D5F92_RS02545;Parent=gene-D5F92_RS02545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205155.1;locus_tag=D5F92_RS02545;partial=true;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;start_range=.,25325;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 25778 25951 . + . ID=gene-D5F92_RS02550;Name=D5F92_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02550;old_locus_tag=D5F92_02560 NZ_QYTJ01000012.1 Protein Homology CDS 25778 25951 . + 0 ID=cds-WP_086163502.1;Parent=gene-D5F92_RS02550;Dbxref=GenBank:WP_086163502.1;Name=WP_086163502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683598.1;locus_tag=D5F92_RS02550;product=transcriptional regulator;protein_id=WP_086163502.1;transl_table=11 NZ_QYTJ01000012.1 RefSeq gene 25999 26696 . - . ID=gene-D5F92_RS02555;Name=D5F92_RS02555;end_range=26696,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02555;old_locus_tag=D5F92_02565;partial=true NZ_QYTJ01000012.1 Protein Homology CDS 25999 26696 . - 2 ID=cds-WP_124785421.1;Parent=gene-D5F92_RS02555;Dbxref=GenBank:WP_124785421.1;Name=WP_124785421.1;Ontology_term=GO:0004803;end_range=26696,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS02555;partial=true;product=IS3 family transposase;protein_id=WP_124785421.1;transl_table=11 ##sequence-region NZ_QYTJ01000013.1 1 1408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000013.1 RefSeq region 1 1408 . + . ID=NZ_QYTJ01000013.1:1..1408;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000013.1 RefSeq gene 144 259 . + . ID=gene-D5F92_RS02560;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS02560;old_locus_tag=D5F92_02570 NZ_QYTJ01000013.1 cmsearch rRNA 144 259 . + . ID=rna-D5F92_RS02560;Parent=gene-D5F92_RS02560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02560;product=5S ribosomal RNA NZ_QYTJ01000013.1 cmsearch exon 144 259 . + . ID=exon-D5F92_RS02560-1;Parent=rna-D5F92_RS02560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS02560;product=5S ribosomal RNA NZ_QYTJ01000013.1 RefSeq gene 263 335 . + . ID=gene-D5F92_RS02565;Name=D5F92_RS02565;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02565;old_locus_tag=D5F92_02575 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 263 335 . + . ID=rna-D5F92_RS02565;Parent=gene-D5F92_RS02565;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02565;product=tRNA-Val NZ_QYTJ01000013.1 tRNAscan-SE exon 263 335 . + . ID=exon-D5F92_RS02565-1;Parent=rna-D5F92_RS02565;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02565;product=tRNA-Val NZ_QYTJ01000013.1 RefSeq gene 447 520 . + . ID=gene-D5F92_RS02575;Name=D5F92_RS02575;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02575;old_locus_tag=D5F92_02585 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 447 520 . + . ID=rna-D5F92_RS02575;Parent=gene-D5F92_RS02575;anticodon=(pos:481..483);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02575;product=tRNA-Ile NZ_QYTJ01000013.1 tRNAscan-SE exon 447 520 . + . ID=exon-D5F92_RS02575-1;Parent=rna-D5F92_RS02575;anticodon=(pos:481..483);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02575;product=tRNA-Ile NZ_QYTJ01000013.1 RefSeq gene 531 602 . + . ID=gene-D5F92_RS02580;Name=D5F92_RS02580;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02580;old_locus_tag=D5F92_02590 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 531 602 . + . ID=rna-D5F92_RS02580;Parent=gene-D5F92_RS02580;anticodon=(pos:564..566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02580;product=tRNA-Glu NZ_QYTJ01000013.1 tRNAscan-SE exon 531 602 . + . ID=exon-D5F92_RS02580-1;Parent=rna-D5F92_RS02580;anticodon=(pos:564..566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02580;product=tRNA-Glu NZ_QYTJ01000013.1 RefSeq gene 616 705 . + . ID=gene-D5F92_RS02585;Name=D5F92_RS02585;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02585;old_locus_tag=D5F92_02595 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 616 705 . + . ID=rna-D5F92_RS02585;Parent=gene-D5F92_RS02585;anticodon=(pos:652..654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02585;product=tRNA-Ser NZ_QYTJ01000013.1 tRNAscan-SE exon 616 705 . + . ID=exon-D5F92_RS02585-1;Parent=rna-D5F92_RS02585;anticodon=(pos:652..654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02585;product=tRNA-Ser NZ_QYTJ01000013.1 RefSeq gene 716 789 . + . ID=gene-D5F92_RS02590;Name=D5F92_RS02590;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02590;old_locus_tag=D5F92_02600 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 716 789 . + . ID=rna-D5F92_RS02590;Parent=gene-D5F92_RS02590;anticodon=(pos:750..752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02590;product=tRNA-Met NZ_QYTJ01000013.1 tRNAscan-SE exon 716 789 . + . ID=exon-D5F92_RS02590-1;Parent=rna-D5F92_RS02590;anticodon=(pos:750..752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02590;product=tRNA-Met NZ_QYTJ01000013.1 RefSeq gene 792 864 . + . ID=gene-D5F92_RS02595;Name=D5F92_RS02595;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02595;old_locus_tag=D5F92_02605 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 792 864 . + . ID=rna-D5F92_RS02595;Parent=gene-D5F92_RS02595;anticodon=(pos:825..827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02595;product=tRNA-Phe NZ_QYTJ01000013.1 tRNAscan-SE exon 792 864 . + . ID=exon-D5F92_RS02595-1;Parent=rna-D5F92_RS02595;anticodon=(pos:825..827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02595;product=tRNA-Phe NZ_QYTJ01000013.1 RefSeq gene 876 956 . + . ID=gene-D5F92_RS02600;Name=D5F92_RS02600;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02600;old_locus_tag=D5F92_02610 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 876 956 . + . ID=rna-D5F92_RS02600;Parent=gene-D5F92_RS02600;anticodon=(pos:910..912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02600;product=tRNA-Tyr NZ_QYTJ01000013.1 tRNAscan-SE exon 876 956 . + . ID=exon-D5F92_RS02600-1;Parent=rna-D5F92_RS02600;anticodon=(pos:910..912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02600;product=tRNA-Tyr NZ_QYTJ01000013.1 RefSeq gene 963 1033 . + . ID=gene-D5F92_RS02605;Name=D5F92_RS02605;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02605;old_locus_tag=D5F92_02615 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 963 1033 . + . ID=rna-D5F92_RS02605;Parent=gene-D5F92_RS02605;anticodon=(pos:995..997);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02605;product=tRNA-Trp NZ_QYTJ01000013.1 tRNAscan-SE exon 963 1033 . + . ID=exon-D5F92_RS02605-1;Parent=rna-D5F92_RS02605;anticodon=(pos:995..997);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02605;product=tRNA-Trp NZ_QYTJ01000013.1 RefSeq gene 1048 1120 . + . ID=gene-D5F92_RS02610;Name=D5F92_RS02610;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02610;old_locus_tag=D5F92_02620 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 1048 1120 . + . ID=rna-D5F92_RS02610;Parent=gene-D5F92_RS02610;anticodon=(pos:1081..1083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02610;product=tRNA-His NZ_QYTJ01000013.1 tRNAscan-SE exon 1048 1120 . + . ID=exon-D5F92_RS02610-1;Parent=rna-D5F92_RS02610;anticodon=(pos:1081..1083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02610;product=tRNA-His NZ_QYTJ01000013.1 RefSeq gene 1127 1198 . + . ID=gene-D5F92_RS02615;Name=D5F92_RS02615;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02615;old_locus_tag=D5F92_02625 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 1127 1198 . + . ID=rna-D5F92_RS02615;Parent=gene-D5F92_RS02615;anticodon=(pos:1159..1161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02615;product=tRNA-Gln NZ_QYTJ01000013.1 tRNAscan-SE exon 1127 1198 . + . ID=exon-D5F92_RS02615-1;Parent=rna-D5F92_RS02615;anticodon=(pos:1159..1161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02615;product=tRNA-Gln NZ_QYTJ01000013.1 RefSeq gene 1209 1292 . + . ID=gene-D5F92_RS02620;Name=D5F92_RS02620;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS02620;old_locus_tag=D5F92_02630 NZ_QYTJ01000013.1 tRNAscan-SE tRNA 1209 1292 . + . ID=rna-D5F92_RS02620;Parent=gene-D5F92_RS02620;anticodon=(pos:1243..1245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02620;product=tRNA-Leu NZ_QYTJ01000013.1 tRNAscan-SE exon 1209 1292 . + . ID=exon-D5F92_RS02620-1;Parent=rna-D5F92_RS02620;anticodon=(pos:1243..1245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS02620;product=tRNA-Leu ##sequence-region NZ_QYTJ01000014.1 1 18268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000014.1 RefSeq region 1 18268 . + . ID=NZ_QYTJ01000014.1:1..18268;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000014.1 RefSeq gene 1 805 . - . ID=gene-D5F92_RS02625;Name=D5F92_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02625;old_locus_tag=D5F92_02635;partial=true;start_range=.,1 NZ_QYTJ01000014.1 Protein Homology CDS 1 805 . - 0 ID=cds-WP_142996887.1;Parent=gene-D5F92_RS02625;Dbxref=GenBank:WP_142996887.1;Name=WP_142996887.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723856.1;locus_tag=D5F92_RS02625;partial=true;product=alpha/beta hydrolase;protein_id=WP_142996887.1;start_range=.,1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 914 2518 . - . ID=gene-D5F92_RS02630;Name=D5F92_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02630;old_locus_tag=D5F92_02640 NZ_QYTJ01000014.1 Protein Homology CDS 914 2518 . - 0 ID=cds-WP_016502405.1;Parent=gene-D5F92_RS02630;Dbxref=GenBank:WP_016502405.1;Name=WP_016502405.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170438.1;locus_tag=D5F92_RS02630;product=CTP synthase;protein_id=WP_016502405.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 2791 3366 . - . ID=gene-D5F92_RS02635;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=D5F92_RS02635;old_locus_tag=D5F92_02645 NZ_QYTJ01000014.1 Protein Homology CDS 2791 3366 . - 0 ID=cds-WP_000418426.1;Parent=gene-D5F92_RS02635;Dbxref=GenBank:WP_000418426.1;Name=WP_000418426.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418426.1;locus_tag=D5F92_RS02635;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_000418426.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 3555 4838 . - . ID=gene-D5F92_RS02640;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=D5F92_RS02640;old_locus_tag=D5F92_02650 NZ_QYTJ01000014.1 Protein Homology CDS 3555 4838 . - 0 ID=cds-WP_000107750.1;Parent=gene-D5F92_RS02640;Dbxref=GenBank:WP_000107750.1;Name=WP_000107750.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645628.1;locus_tag=D5F92_RS02640;product=trigger factor;protein_id=WP_000107750.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 4995 5837 . + . ID=gene-D5F92_RS02645;Name=D5F92_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02645;old_locus_tag=D5F92_02655 NZ_QYTJ01000014.1 Protein Homology CDS 4995 5837 . + 0 ID=cds-WP_016502404.1;Parent=gene-D5F92_RS02645;Dbxref=GenBank:WP_016502404.1;Name=WP_016502404.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502404.1;locus_tag=D5F92_RS02645;product=mechanosensitive ion channel family protein;protein_id=WP_016502404.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 5874 6443 . - . ID=gene-D5F92_RS02650;Name=D5F92_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02650;old_locus_tag=D5F92_02660 NZ_QYTJ01000014.1 Protein Homology CDS 5874 6443 . - 0 ID=cds-WP_000599671.1;Parent=gene-D5F92_RS02650;Dbxref=GenBank:WP_000599671.1;Name=WP_000599671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599673.1;locus_tag=D5F92_RS02650;product=TIGR01440 family protein;protein_id=WP_000599671.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 6440 6904 . - . ID=gene-D5F92_RS02655;Name=D5F92_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02655;old_locus_tag=D5F92_02665 NZ_QYTJ01000014.1 Protein Homology CDS 6440 6904 . - 0 ID=cds-WP_001224404.1;Parent=gene-D5F92_RS02655;Dbxref=GenBank:WP_001224404.1;Name=WP_001224404.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224404.1;locus_tag=D5F92_RS02655;product=ECF transporter S component;protein_id=WP_001224404.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 6914 7672 . - . ID=gene-D5F92_RS02660;Name=D5F92_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02660;old_locus_tag=D5F92_02670 NZ_QYTJ01000014.1 Protein Homology CDS 6914 7672 . - 0 ID=cds-WP_000857670.1;Parent=gene-D5F92_RS02660;Dbxref=GenBank:WP_000857670.1;Name=WP_000857670.1;Ontology_term=GO:0009228,GO:0008972;gbkey=CDS;go_function=phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857667.1;locus_tag=D5F92_RS02660;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000857670.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 7635 8411 . - . ID=gene-D5F92_RS02665;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=D5F92_RS02665;old_locus_tag=D5F92_02675 NZ_QYTJ01000014.1 Protein Homology CDS 7635 8411 . - 0 ID=cds-WP_000199161.1;Parent=gene-D5F92_RS02665;Dbxref=GenBank:WP_000199161.1;Name=WP_000199161.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058291.1;locus_tag=D5F92_RS02665;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000199161.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 8482 9729 . - . ID=gene-D5F92_RS02670;Name=D5F92_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02670;old_locus_tag=D5F92_02680 NZ_QYTJ01000014.1 Protein Homology CDS 8482 9729 . - 0 ID=cds-WP_000256866.1;Parent=gene-D5F92_RS02670;Dbxref=GenBank:WP_000256866.1;Name=WP_000256866.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058290.1;locus_tag=D5F92_RS02670;product=aminotransferase-like domain-containing protein;protein_id=WP_000256866.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 9843 10982 . - . ID=gene-D5F92_RS02675;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D5F92_RS02675;old_locus_tag=D5F92_02685 NZ_QYTJ01000014.1 Protein Homology CDS 9843 10982 . - 0 ID=cds-WP_001066278.1;Parent=gene-D5F92_RS02675;Dbxref=GenBank:WP_001066278.1;Name=WP_001066278.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647541.1;locus_tag=D5F92_RS02675;product=molecular chaperone DnaJ;protein_id=WP_001066278.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 11271 13100 . - . ID=gene-D5F92_RS02680;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=D5F92_RS02680;old_locus_tag=D5F92_02690 NZ_QYTJ01000014.1 Protein Homology CDS 11271 13100 . - 0 ID=cds-WP_029141027.1;Parent=gene-D5F92_RS02680;Dbxref=GenBank:WP_029141027.1;Name=WP_029141027.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=D5F92_RS02680;product=molecular chaperone DnaK;protein_id=WP_029141027.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 13281 13853 . - . ID=gene-D5F92_RS02685;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=D5F92_RS02685;old_locus_tag=D5F92_02695 NZ_QYTJ01000014.1 Protein Homology CDS 13281 13853 . - 0 ID=cds-WP_001872862.1;Parent=gene-D5F92_RS02685;Dbxref=GenBank:WP_001872862.1;Name=WP_001872862.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988583.1;locus_tag=D5F92_RS02685;product=nucleotide exchange factor GrpE;protein_id=WP_001872862.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 13856 14890 . - . ID=gene-D5F92_RS02690;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=D5F92_RS02690;old_locus_tag=D5F92_02700 NZ_QYTJ01000014.1 Protein Homology CDS 13856 14890 . - 0 ID=cds-WP_001872861.1;Parent=gene-D5F92_RS02690;Dbxref=GenBank:WP_001872861.1;Name=WP_001872861.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015911815.1;locus_tag=D5F92_RS02690;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_001872861.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 15033 15608 . - . ID=gene-D5F92_RS02695;Name=D5F92_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02695;old_locus_tag=D5F92_02705 NZ_QYTJ01000014.1 Protein Homology CDS 15033 15608 . - 0 ID=cds-WP_001231504.1;Parent=gene-D5F92_RS02695;Dbxref=GenBank:WP_001231504.1;Name=WP_001231504.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767148.1;locus_tag=D5F92_RS02695;product=glycoside hydrolase family 73 protein;protein_id=WP_001231504.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 15605 16357 . - . ID=gene-D5F92_RS02700;Name=D5F92_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02700;old_locus_tag=D5F92_02710 NZ_QYTJ01000014.1 Protein Homology CDS 15605 16357 . - 0 ID=cds-WP_000739663.1;Parent=gene-D5F92_RS02700;Dbxref=GenBank:WP_000739663.1;Name=WP_000739663.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739664.1;locus_tag=D5F92_RS02700;product=M15 family metallopeptidase;protein_id=WP_000739663.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 16354 17046 . - . ID=gene-D5F92_RS02705;Name=D5F92_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02705;old_locus_tag=D5F92_02715 NZ_QYTJ01000014.1 Protein Homology CDS 16354 17046 . - 0 ID=cds-WP_000049272.1;Parent=gene-D5F92_RS02705;Dbxref=GenBank:WP_000049272.1;Name=WP_000049272.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049270.1;locus_tag=D5F92_RS02705;product=histidine phosphatase family protein;protein_id=WP_000049272.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq gene 17169 17648 . - . ID=gene-D5F92_RS02710;Name=D5F92_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02710;old_locus_tag=D5F92_02720 NZ_QYTJ01000014.1 Protein Homology CDS 17169 17648 . - 0 ID=cds-WP_001204194.1;Parent=gene-D5F92_RS02710;Dbxref=GenBank:WP_001204194.1;Name=WP_001204194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204194.1;locus_tag=D5F92_RS02710;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_001204194.1;transl_table=11 NZ_QYTJ01000014.1 RefSeq pseudogene 17896 18268 . + . ID=gene-D5F92_RS02715;Name=D5F92_RS02715;end_range=18268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02715;old_locus_tag=D5F92_02725;partial=true;pseudo=true NZ_QYTJ01000014.1 Protein Homology CDS 17896 18268 . + 0 ID=cds-D5F92_RS02715;Parent=gene-D5F92_RS02715;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18268,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS02715;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000015.1 1 30033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000015.1 RefSeq region 1 30033 . + . ID=NZ_QYTJ01000015.1:1..30033;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000015.1 RefSeq gene 142 2406 . - . ID=gene-D5F92_RS02720;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=D5F92_RS02720;old_locus_tag=D5F92_02730 NZ_QYTJ01000015.1 Protein Homology CDS 142 2406 . - 0 ID=cds-WP_000197731.1;Parent=gene-D5F92_RS02720;Dbxref=GenBank:WP_000197731.1;Name=WP_000197731.1;Ontology_term=GO:0005975,GO:0004645,GO:0030170;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197732.1;locus_tag=D5F92_RS02720;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_000197731.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 2418 3914 . - . ID=gene-D5F92_RS02725;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=D5F92_RS02725;old_locus_tag=D5F92_02735 NZ_QYTJ01000015.1 Protein Homology CDS 2418 3914 . - 0 ID=cds-WP_000745458.1;Parent=gene-D5F92_RS02725;Dbxref=GenBank:WP_000745458.1;Name=WP_000745458.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650672.1;locus_tag=D5F92_RS02725;product=4-alpha-glucanotransferase;protein_id=WP_000745458.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 4042 5064 . - . ID=gene-D5F92_RS02730;Name=D5F92_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02730;old_locus_tag=D5F92_02740 NZ_QYTJ01000015.1 Protein Homology CDS 4042 5064 . - 0 ID=cds-WP_016481019.1;Parent=gene-D5F92_RS02730;Dbxref=GenBank:WP_016481019.1;Name=WP_016481019.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767614.1;locus_tag=D5F92_RS02730;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_016481019.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 5320 6567 . + . ID=gene-D5F92_RS02735;Name=D5F92_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02735;old_locus_tag=D5F92_02745 NZ_QYTJ01000015.1 Protein Homology CDS 5320 6567 . + 0 ID=cds-WP_000414616.1;Parent=gene-D5F92_RS02735;Dbxref=GenBank:WP_000414616.1;Name=WP_000414616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768369.1;locus_tag=D5F92_RS02735;product=extracellular solute-binding protein;protein_id=WP_000414616.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 6665 8035 . + . ID=gene-D5F92_RS02740;Name=D5F92_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02740;old_locus_tag=D5F92_02750 NZ_QYTJ01000015.1 Protein Homology CDS 6665 8035 . + 0 ID=cds-WP_001035541.1;Parent=gene-D5F92_RS02740;Dbxref=GenBank:WP_001035541.1;Name=WP_001035541.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035543.1;locus_tag=D5F92_RS02740;product=carbohydrate ABC transporter permease;protein_id=WP_001035541.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 8035 8871 . + . ID=gene-D5F92_RS02745;Name=D5F92_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02745;old_locus_tag=D5F92_02755 NZ_QYTJ01000015.1 Protein Homology CDS 8035 8871 . + 0 ID=cds-WP_001035401.1;Parent=gene-D5F92_RS02745;Dbxref=GenBank:WP_001035401.1;Name=WP_001035401.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035402.1;locus_tag=D5F92_RS02745;product=sugar ABC transporter permease;protein_id=WP_001035401.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 9102 10574 . + . ID=gene-D5F92_RS02750;Name=D5F92_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02750;old_locus_tag=D5F92_02760 NZ_QYTJ01000015.1 Protein Homology CDS 9102 10574 . + 0 ID=cds-WP_000416073.1;Parent=gene-D5F92_RS02750;Dbxref=GenBank:WP_000416073.1;Name=WP_000416073.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771948.1;locus_tag=D5F92_RS02750;product=peptide MFS transporter;protein_id=WP_000416073.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 10617 11081 . - . ID=gene-D5F92_RS02755;Name=D5F92_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02755;old_locus_tag=D5F92_02765 NZ_QYTJ01000015.1 Protein Homology CDS 10617 11081 . - 0 ID=cds-WP_016481020.1;Parent=gene-D5F92_RS02755;Dbxref=GenBank:WP_016481020.1;Name=WP_016481020.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649420.1;locus_tag=D5F92_RS02755;product=8-oxo-dGTP diphosphatase;protein_id=WP_016481020.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 11165 11353 . - . ID=gene-D5F92_RS02760;Name=D5F92_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02760;old_locus_tag=D5F92_02770 NZ_QYTJ01000015.1 Protein Homology CDS 11165 11353 . - 0 ID=cds-WP_000728848.1;Parent=gene-D5F92_RS02760;Dbxref=GenBank:WP_000728848.1;Name=WP_000728848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728848.1;locus_tag=D5F92_RS02760;product=hypothetical protein;protein_id=WP_000728848.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 11364 12689 . - . ID=gene-D5F92_RS02765;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=D5F92_RS02765;old_locus_tag=D5F92_02775 NZ_QYTJ01000015.1 Protein Homology CDS 11364 12689 . - 0 ID=cds-WP_124749621.1;Parent=gene-D5F92_RS02765;Dbxref=GenBank:WP_124749621.1;Name=WP_124749621.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646253.1;locus_tag=D5F92_RS02765;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_124749621.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 12682 14190 . - . ID=gene-D5F92_RS02770;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=D5F92_RS02770;old_locus_tag=D5F92_02780 NZ_QYTJ01000015.1 Protein Homology CDS 12682 14190 . - 0 ID=cds-WP_016481022.1;Parent=gene-D5F92_RS02770;Dbxref=GenBank:WP_016481022.1;Name=WP_016481022.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771536.1;locus_tag=D5F92_RS02770;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_016481022.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 14204 16591 . - . ID=gene-D5F92_RS02775;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=D5F92_RS02775;old_locus_tag=D5F92_02785 NZ_QYTJ01000015.1 Protein Homology CDS 14204 16591 . - 0 ID=cds-WP_016503044.1;Parent=gene-D5F92_RS02775;Dbxref=GenBank:WP_016503044.1;Name=WP_016503044.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650350.1;locus_tag=D5F92_RS02775;product=accessory Sec system translocase SecA2;protein_id=WP_016503044.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 16578 17570 . - . ID=gene-D5F92_RS02780;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=D5F92_RS02780;old_locus_tag=D5F92_02790 NZ_QYTJ01000015.1 Protein Homology CDS 16578 17570 . - 0 ID=cds-WP_124749183.1;Parent=gene-D5F92_RS02780;Dbxref=GenBank:WP_124749183.1;Name=WP_124749183.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647904.1;locus_tag=D5F92_RS02780;product=accessory Sec system protein Asp3;protein_id=WP_124749183.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 17567 19126 . - . ID=gene-D5F92_RS02785;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=D5F92_RS02785;old_locus_tag=D5F92_02795 NZ_QYTJ01000015.1 Protein Homology CDS 17567 19126 . - 0 ID=cds-WP_000034857.1;Parent=gene-D5F92_RS02785;Dbxref=GenBank:WP_000034857.1;Name=WP_000034857.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058668.1;locus_tag=D5F92_RS02785;product=accessory Sec system protein Asp2;protein_id=WP_000034857.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 19133 20677 . - . ID=gene-D5F92_RS02790;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=D5F92_RS02790;old_locus_tag=D5F92_02800 NZ_QYTJ01000015.1 Protein Homology CDS 19133 20677 . - 0 ID=cds-WP_016503046.1;Parent=gene-D5F92_RS02790;Dbxref=GenBank:WP_016503046.1;Name=WP_016503046.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481024.1;locus_tag=D5F92_RS02790;product=accessory Sec system protein Asp1;protein_id=WP_016503046.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 20677 21906 . - . ID=gene-D5F92_RS02795;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=D5F92_RS02795;old_locus_tag=D5F92_02805 NZ_QYTJ01000015.1 Protein Homology CDS 20677 21906 . - 0 ID=cds-WP_000772256.1;Parent=gene-D5F92_RS02795;Dbxref=GenBank:WP_000772256.1;Name=WP_000772256.1;Ontology_term=GO:0006886;gbkey=CDS;gene=secY2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772256.1;locus_tag=D5F92_RS02795;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_000772256.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 22030 23226 . - . ID=gene-D5F92_RS02800;Name=D5F92_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02800;old_locus_tag=D5F92_02810 NZ_QYTJ01000015.1 Protein Homology CDS 22030 23226 . - 0 ID=cds-WP_124749619.1;Parent=gene-D5F92_RS02800;Dbxref=GenBank:WP_124749619.1;Name=WP_124749619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503048.1;locus_tag=D5F92_RS02800;product=SP_1767 family glycosyltransferase;protein_id=WP_124749619.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 23287 24162 . - . ID=gene-D5F92_RS02805;Name=D5F92_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02805;old_locus_tag=D5F92_02815 NZ_QYTJ01000015.1 Protein Homology CDS 23287 24162 . - 0 ID=cds-WP_016481027.1;Parent=gene-D5F92_RS02805;Dbxref=GenBank:WP_016481027.1;Name=WP_016481027.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130208.1;locus_tag=D5F92_RS02805;product=glycosyltransferase family 2 protein;protein_id=WP_016481027.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 24155 25339 . - . ID=gene-D5F92_RS02810;Name=D5F92_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02810;old_locus_tag=D5F92_02820 NZ_QYTJ01000015.1 Protein Homology CDS 24155 25339 . - 0 ID=cds-WP_000795052.1;Parent=gene-D5F92_RS02810;Dbxref=GenBank:WP_000795052.1;Name=WP_000795052.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647328.1;locus_tag=D5F92_RS02810;product=glycosyltransferase;protein_id=WP_000795052.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq pseudogene 25329 26570 . - . ID=gene-D5F92_RS02815;Name=D5F92_RS02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02815;old_locus_tag=D5F92_02825;pseudo=true NZ_QYTJ01000015.1 Protein Homology CDS 25329 26570 . - 0 ID=cds-D5F92_RS02815;Parent=gene-D5F92_RS02815;Note=internal stop;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649797.1;locus_tag=D5F92_RS02815;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 26567 27772 . - . ID=gene-D5F92_RS02820;Name=D5F92_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02820;old_locus_tag=D5F92_02830 NZ_QYTJ01000015.1 Protein Homology CDS 26567 27772 . - 0 ID=cds-WP_016481030.1;Parent=gene-D5F92_RS02820;Dbxref=GenBank:WP_016481030.1;Name=WP_016481030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751410.1;locus_tag=D5F92_RS02820;product=CDP-glycerol--glycerophosphate glycerophosphotransferase;protein_id=WP_016481030.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 27781 28788 . - . ID=gene-D5F92_RS02825;Name=D5F92_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02825;old_locus_tag=D5F92_02835 NZ_QYTJ01000015.1 Protein Homology CDS 27781 28788 . - 0 ID=cds-WP_016481031.1;Parent=gene-D5F92_RS02825;Dbxref=GenBank:WP_016481031.1;Name=WP_016481031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263779.1;locus_tag=D5F92_RS02825;product=sugar transferase;protein_id=WP_016481031.1;transl_table=11 NZ_QYTJ01000015.1 RefSeq gene 29119 30033 . - . ID=gene-D5F92_RS02830;Name=D5F92_RS02830;end_range=30033,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02830;old_locus_tag=D5F92_02840;partial=true NZ_QYTJ01000015.1 Protein Homology CDS 29119 30033 . - 0 ID=cds-WP_142996888.1;Parent=gene-D5F92_RS02830;Dbxref=GenBank:WP_142996888.1;Name=WP_142996888.1;Ontology_term=GO:0005576;end_range=30033,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503051.1;locus_tag=D5F92_RS02830;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_142996888.1;transl_table=11 ##sequence-region NZ_QYTJ01000016.1 1 4458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000016.1 RefSeq region 1 4458 . + . ID=NZ_QYTJ01000016.1:1..4458;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000016.1 RefSeq gene 64 225 . - . ID=gene-D5F92_RS02835;Name=D5F92_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02835;old_locus_tag=D5F92_02845 NZ_QYTJ01000016.1 GeneMarkS-2+ CDS 64 225 . - 0 ID=cds-WP_180383651.1;Parent=gene-D5F92_RS02835;Dbxref=GenBank:WP_180383651.1;Name=WP_180383651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS02835;product=hypothetical protein;protein_id=WP_180383651.1;transl_table=11 NZ_QYTJ01000016.1 RefSeq gene 530 982 . - . ID=gene-D5F92_RS02845;Name=D5F92_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02845;old_locus_tag=D5F92_02855 NZ_QYTJ01000016.1 Protein Homology CDS 530 982 . - 0 ID=cds-WP_001081097.1;Parent=gene-D5F92_RS02845;Dbxref=GenBank:WP_001081097.1;Name=WP_001081097.1;Ontology_term=GO:0006220,GO:0009972,GO:0004132,GO:0008270;gbkey=CDS;go_function=dCMP deaminase activity|0004132||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine nucleotide metabolic process|0006220||IEA,obsolete cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644130.1;locus_tag=D5F92_RS02845;product=deoxycytidylate deaminase;protein_id=WP_001081097.1;transl_table=11 NZ_QYTJ01000016.1 RefSeq gene 994 2061 . - . ID=gene-D5F92_RS02850;Name=D5F92_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02850;old_locus_tag=D5F92_02860 NZ_QYTJ01000016.1 Protein Homology CDS 994 2061 . - 0 ID=cds-WP_016503170.1;Parent=gene-D5F92_RS02850;Dbxref=GenBank:WP_016503170.1;Name=WP_016503170.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505344.1;locus_tag=D5F92_RS02850;product=M24 family metallopeptidase;protein_id=WP_016503170.1;transl_table=11 NZ_QYTJ01000016.1 RefSeq gene 2161 2877 . - . ID=gene-D5F92_RS02855;Name=D5F92_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02855;old_locus_tag=D5F92_02865 NZ_QYTJ01000016.1 Protein Homology CDS 2161 2877 . - 0 ID=cds-WP_016503171.1;Parent=gene-D5F92_RS02855;Dbxref=GenBank:WP_016503171.1;Name=WP_016503171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584725.1;locus_tag=D5F92_RS02855;product=DUF4811 domain-containing protein;protein_id=WP_016503171.1;transl_table=11 NZ_QYTJ01000016.1 RefSeq gene 2879 4378 . - . ID=gene-D5F92_RS02860;Name=D5F92_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02860;old_locus_tag=D5F92_02870 NZ_QYTJ01000016.1 Protein Homology CDS 2879 4378 . - 0 ID=cds-WP_000208365.1;Parent=gene-D5F92_RS02860;Dbxref=GenBank:WP_000208365.1;Name=WP_000208365.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208358.1;locus_tag=D5F92_RS02860;product=MDR family MFS transporter;protein_id=WP_000208365.1;transl_table=11 ##sequence-region NZ_QYTJ01000017.1 1 6871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000017.1 RefSeq region 1 6871 . + . ID=NZ_QYTJ01000017.1:1..6871;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000017.1 RefSeq gene 100 558 . + . ID=gene-D5F92_RS02865;Name=D5F92_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02865;old_locus_tag=D5F92_02875 NZ_QYTJ01000017.1 Protein Homology CDS 100 558 . + 0 ID=cds-WP_001233829.1;Parent=gene-D5F92_RS02865;Dbxref=GenBank:WP_001233829.1;Name=WP_001233829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647095.1;locus_tag=D5F92_RS02865;product=hypothetical protein;protein_id=WP_001233829.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq pseudogene 622 1940 . + . ID=gene-D5F92_RS11285;Name=D5F92_RS11285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11285;pseudo=true NZ_QYTJ01000017.1 Protein Homology CDS 622 1940 . + 0 ID=cds-D5F92_RS11285;Parent=gene-D5F92_RS11285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073524.1;locus_tag=D5F92_RS11285;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 1959 2231 . + . ID=gene-D5F92_RS02880;Name=D5F92_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02880;old_locus_tag=D5F92_02890 NZ_QYTJ01000017.1 Protein Homology CDS 1959 2231 . + 0 ID=cds-WP_016480269.1;Parent=gene-D5F92_RS02880;Dbxref=GenBank:WP_016480269.1;Name=WP_016480269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032104.1;locus_tag=D5F92_RS02880;product=hypothetical protein;protein_id=WP_016480269.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 2241 2591 . + . ID=gene-D5F92_RS02885;Name=D5F92_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02885;old_locus_tag=D5F92_02895 NZ_QYTJ01000017.1 Protein Homology CDS 2241 2591 . + 0 ID=cds-WP_016480270.1;Parent=gene-D5F92_RS02885;Dbxref=GenBank:WP_016480270.1;Name=WP_016480270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480270.1;locus_tag=D5F92_RS02885;product=hypothetical protein;protein_id=WP_016480270.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 3039 3599 . + . ID=gene-D5F92_RS02890;Name=D5F92_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02890;old_locus_tag=D5F92_02900 NZ_QYTJ01000017.1 Protein Homology CDS 3039 3599 . + 0 ID=cds-WP_124749645.1;Parent=gene-D5F92_RS02890;Dbxref=GenBank:WP_124749645.1;Name=WP_124749645.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771544.1;locus_tag=D5F92_RS02890;product=GNAT family N-acetyltransferase;protein_id=WP_124749645.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq pseudogene 3699 4251 . + . ID=gene-D5F92_RS02895;Name=D5F92_RS02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02895;old_locus_tag=D5F92_02905;pseudo=true NZ_QYTJ01000017.1 Protein Homology CDS 3699 4251 . + 0 ID=cds-D5F92_RS02895;Parent=gene-D5F92_RS02895;Note=frameshifted%3B internal stop;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649299.1;locus_tag=D5F92_RS02895;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 4326 5006 . + . ID=gene-D5F92_RS02900;Name=D5F92_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02900;old_locus_tag=D5F92_02910 NZ_QYTJ01000017.1 Protein Homology CDS 4326 5006 . + 0 ID=cds-WP_025194843.1;Parent=gene-D5F92_RS02900;Dbxref=GenBank:WP_025194843.1;Name=WP_025194843.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503134.1;locus_tag=D5F92_RS02900;product=GNAT family N-acetyltransferase;protein_id=WP_025194843.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 5266 6213 . - . ID=gene-D5F92_RS02905;Name=D5F92_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02905;old_locus_tag=D5F92_02915 NZ_QYTJ01000017.1 Protein Homology CDS 5266 6213 . - 0 ID=cds-WP_124749643.1;Parent=gene-D5F92_RS02905;Dbxref=GenBank:WP_124749643.1;Name=WP_124749643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502471.1;locus_tag=D5F92_RS02905;product=sigma factor regulator N-terminal domain-containing protein;protein_id=WP_124749643.1;transl_table=11 NZ_QYTJ01000017.1 RefSeq gene 6210 6701 . - . ID=gene-D5F92_RS02910;Name=D5F92_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02910;old_locus_tag=D5F92_02920 NZ_QYTJ01000017.1 Protein Homology CDS 6210 6701 . - 0 ID=cds-WP_000025251.1;Parent=gene-D5F92_RS02910;Dbxref=GenBank:WP_000025251.1;Name=WP_000025251.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025252.1;locus_tag=D5F92_RS02910;product=RNA polymerase sigma factor;protein_id=WP_000025251.1;transl_table=11 ##sequence-region NZ_QYTJ01000018.1 1 25067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000018.1 RefSeq region 1 25067 . + . ID=NZ_QYTJ01000018.1:1..25067;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000018.1 RefSeq gene 371 1540 . + . ID=gene-D5F92_RS02915;Name=D5F92_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02915;old_locus_tag=D5F92_02925 NZ_QYTJ01000018.1 Protein Homology CDS 371 1540 . + 0 ID=cds-WP_015058682.1;Parent=gene-D5F92_RS02915;Dbxref=GenBank:WP_015058682.1;Name=WP_015058682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312381.1;locus_tag=D5F92_RS02915;product=multidrug efflux MFS transporter;protein_id=WP_015058682.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 1537 1683 . + . ID=gene-D5F92_RS02920;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F92_RS02920;old_locus_tag=D5F92_02930 NZ_QYTJ01000018.1 Protein Homology CDS 1537 1683 . + 0 ID=cds-WP_001873241.1;Parent=gene-D5F92_RS02920;Dbxref=GenBank:WP_001873241.1;Name=WP_001873241.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803498.1;locus_tag=D5F92_RS02920;product=50S ribosomal protein L33;protein_id=WP_001873241.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 1730 1966 . + . ID=gene-D5F92_RS02925;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=D5F92_RS02925;old_locus_tag=D5F92_02935 NZ_QYTJ01000018.1 Protein Homology CDS 1730 1966 . + 0 ID=cds-WP_000282513.1;Parent=gene-D5F92_RS02925;Dbxref=GenBank:WP_000282513.1;Name=WP_000282513.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282513.1;locus_tag=D5F92_RS02925;product=preprotein translocase subunit SecG;protein_id=WP_000282513.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 2079 4484 . + . ID=gene-D5F92_RS02930;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=D5F92_RS02930;old_locus_tag=D5F92_02940 NZ_QYTJ01000018.1 Protein Homology CDS 2079 4484 . + 0 ID=cds-WP_016503061.1;Parent=gene-D5F92_RS02930;Dbxref=GenBank:WP_016503061.1;Name=WP_016503061.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659933.1;locus_tag=D5F92_RS02930;product=ribonuclease R;protein_id=WP_016503061.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 4487 4954 . + . ID=gene-D5F92_RS02935;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=D5F92_RS02935;old_locus_tag=D5F92_02945 NZ_QYTJ01000018.1 Protein Homology CDS 4487 4954 . + 0 ID=cds-WP_000238456.1;Parent=gene-D5F92_RS02935;Dbxref=GenBank:WP_000238456.1;Name=WP_000238456.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894882.1;locus_tag=D5F92_RS02935;product=SsrA-binding protein SmpB;protein_id=WP_000238456.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 5038 6426 . - . ID=gene-D5F92_RS02940;Name=D5F92_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02940;old_locus_tag=D5F92_02950 NZ_QYTJ01000018.1 Protein Homology CDS 5038 6426 . - 0 ID=cds-WP_124785423.1;Parent=gene-D5F92_RS02940;Dbxref=GenBank:WP_124785423.1;Name=WP_124785423.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042127.1;locus_tag=D5F92_RS02940;product=amino acid permease;protein_id=WP_124785423.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 6555 7481 . - . ID=gene-D5F92_RS02945;Name=D5F92_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02945;old_locus_tag=D5F92_02955 NZ_QYTJ01000018.1 Protein Homology CDS 6555 7481 . - 0 ID=cds-WP_001196763.1;Parent=gene-D5F92_RS02945;Dbxref=GenBank:WP_001196763.1;Name=WP_001196763.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196765.1;locus_tag=D5F92_RS02945;product=glycosyltransferase family 2 protein;protein_id=WP_001196763.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 7610 8002 . - . ID=gene-D5F92_RS02950;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;gene_synonym=lguL;locus_tag=D5F92_RS02950;old_locus_tag=D5F92_02960 NZ_QYTJ01000018.1 Protein Homology CDS 7610 8002 . - 0 ID=cds-WP_001116199.1;Parent=gene-D5F92_RS02950;Dbxref=GenBank:WP_001116199.1;Name=WP_001116199.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771619.1;locus_tag=D5F92_RS02950;product=lactoylglutathione lyase;protein_id=WP_001116199.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 8090 8764 . - . ID=gene-D5F92_RS02955;Name=D5F92_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02955;old_locus_tag=D5F92_02965 NZ_QYTJ01000018.1 Protein Homology CDS 8090 8764 . - 0 ID=cds-WP_000159251.1;Parent=gene-D5F92_RS02955;Dbxref=GenBank:WP_000159251.1;Name=WP_000159251.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159250.1;locus_tag=D5F92_RS02955;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000159251.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 9031 9873 . + . ID=gene-D5F92_RS02960;Name=D5F92_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02960;old_locus_tag=D5F92_02970 NZ_QYTJ01000018.1 Protein Homology CDS 9031 9873 . + 0 ID=cds-WP_000451355.1;Parent=gene-D5F92_RS02960;Dbxref=GenBank:WP_000451355.1;Name=WP_000451355.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058680.1;locus_tag=D5F92_RS02960;product=aldo/keto reductase;protein_id=WP_000451355.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 10063 10785 . + . ID=gene-D5F92_RS02965;Name=D5F92_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02965;old_locus_tag=D5F92_02975 NZ_QYTJ01000018.1 Protein Homology CDS 10063 10785 . + 0 ID=cds-WP_016481044.1;Parent=gene-D5F92_RS02965;Dbxref=GenBank:WP_016481044.1;Name=WP_016481044.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234927.1;locus_tag=D5F92_RS02965;product=pseudouridine synthase;protein_id=WP_016481044.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 10870 12909 . + . ID=gene-D5F92_RS02970;Name=D5F92_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02970;old_locus_tag=D5F92_02980 NZ_QYTJ01000018.1 Protein Homology CDS 10870 12909 . + 0 ID=cds-WP_016503060.1;Parent=gene-D5F92_RS02970;Dbxref=GenBank:WP_016503060.1;Name=WP_016503060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824614.1;locus_tag=D5F92_RS02970;product=amidase family protein;protein_id=WP_016503060.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 13019 13597 . + . ID=gene-D5F92_RS02975;Name=D5F92_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02975;old_locus_tag=D5F92_02985 NZ_QYTJ01000018.1 Protein Homology CDS 13019 13597 . + 0 ID=cds-WP_001883402.1;Parent=gene-D5F92_RS02975;Dbxref=GenBank:WP_001883402.1;Name=WP_001883402.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865323.1;locus_tag=D5F92_RS02975;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_001883402.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 13632 14873 . - . ID=gene-D5F92_RS02980;Name=D5F92_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02980;old_locus_tag=D5F92_02990 NZ_QYTJ01000018.1 Protein Homology CDS 13632 14873 . - 0 ID=cds-WP_000244046.1;Parent=gene-D5F92_RS02980;Dbxref=GenBank:WP_000244046.1;Name=WP_000244046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244044.1;locus_tag=D5F92_RS02980;product=aminopeptidase;protein_id=WP_000244046.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 15051 15179 . + . ID=gene-D5F92_RS02985;Name=D5F92_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02985;old_locus_tag=D5F92_02995 NZ_QYTJ01000018.1 Protein Homology CDS 15051 15179 . + 0 ID=cds-WP_000863865.1;Parent=gene-D5F92_RS02985;Dbxref=GenBank:WP_000863865.1;Name=WP_000863865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863865.1;locus_tag=D5F92_RS02985;product=DUF4044 domain-containing protein;protein_id=WP_000863865.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 15240 16553 . + . ID=gene-D5F92_RS02990;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=D5F92_RS02990;old_locus_tag=D5F92_03000 NZ_QYTJ01000018.1 Protein Homology CDS 15240 16553 . + 0 ID=cds-WP_016503057.1;Parent=gene-D5F92_RS02990;Dbxref=GenBank:WP_016503057.1;Name=WP_016503057.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984148.1;locus_tag=D5F92_RS02990;product=GTPase ObgE;protein_id=WP_016503057.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 16579 16737 . + . ID=gene-D5F92_RS02995;Name=D5F92_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02995;old_locus_tag=D5F92_03005 NZ_QYTJ01000018.1 Protein Homology CDS 16579 16737 . + 0 ID=cds-WP_000502594.1;Parent=gene-D5F92_RS02995;Dbxref=GenBank:WP_000502594.1;Name=WP_000502594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502594.1;locus_tag=D5F92_RS02995;product=hypothetical protein;protein_id=WP_000502594.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 16830 17180 . - . ID=gene-D5F92_RS03000;Name=D5F92_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03000;old_locus_tag=D5F92_03010 NZ_QYTJ01000018.1 Protein Homology CDS 16830 17180 . - 0 ID=cds-WP_124749565.1;Parent=gene-D5F92_RS03000;Dbxref=GenBank:WP_124749565.1;Name=WP_124749565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656279.1;locus_tag=D5F92_RS03000;product=hypothetical protein;protein_id=WP_124749565.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 17329 18069 . - . ID=gene-D5F92_RS03005;Name=D5F92_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03005;old_locus_tag=D5F92_03015 NZ_QYTJ01000018.1 Protein Homology CDS 17329 18069 . - 0 ID=cds-WP_016481038.1;Parent=gene-D5F92_RS03005;Dbxref=GenBank:WP_016481038.1;Name=WP_016481038.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003107174.1;locus_tag=D5F92_RS03005;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_016481038.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 18069 20252 . - . ID=gene-D5F92_RS03010;Name=D5F92_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03010;old_locus_tag=D5F92_03020 NZ_QYTJ01000018.1 Protein Homology CDS 18069 20252 . - 0 ID=cds-WP_124749567.1;Parent=gene-D5F92_RS03010;Dbxref=GenBank:WP_124749567.1;Name=WP_124749567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681008.1;locus_tag=D5F92_RS03010;product=ABC transporter substrate-binding protein/permease;protein_id=WP_124749567.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 20435 21355 . + . ID=gene-D5F92_RS03015;Name=D5F92_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03015;old_locus_tag=D5F92_03025 NZ_QYTJ01000018.1 Protein Homology CDS 20435 21355 . + 0 ID=cds-WP_016481036.1;Parent=gene-D5F92_RS03015;Dbxref=GenBank:WP_016481036.1;Name=WP_016481036.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767142.1;locus_tag=D5F92_RS03015;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016481036.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 21416 23407 . + . ID=gene-D5F92_RS03020;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=D5F92_RS03020;old_locus_tag=D5F92_03030 NZ_QYTJ01000018.1 Protein Homology CDS 21416 23407 . + 0 ID=cds-WP_124749568.1;Parent=gene-D5F92_RS03020;Dbxref=GenBank:WP_124749568.1;Name=WP_124749568.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002261961.1;locus_tag=D5F92_RS03020;product=excinuclease ABC subunit UvrB;protein_id=WP_124749568.1;transl_table=11 NZ_QYTJ01000018.1 RefSeq gene 23505 24998 . - . ID=gene-D5F92_RS03025;Name=D5F92_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03025;old_locus_tag=D5F92_03035 NZ_QYTJ01000018.1 Protein Homology CDS 23505 24998 . - 0 ID=cds-WP_124749570.1;Parent=gene-D5F92_RS03025;Dbxref=GenBank:WP_124749570.1;Name=WP_124749570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646645.1;locus_tag=D5F92_RS03025;product=helix-turn-helix domain-containing protein;protein_id=WP_124749570.1;transl_table=11 ##sequence-region NZ_QYTJ01000019.1 1 91451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000019.1 RefSeq region 1 91451 . + . ID=NZ_QYTJ01000019.1:1..91451;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000019.1 RefSeq gene 1 631 . + . ID=gene-D5F92_RS11355;Name=D5F92_RS11355;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS11355;partial=true;start_range=.,1 NZ_QYTJ01000019.1 cmsearch rRNA 1 631 . + . ID=rna-D5F92_RS11355;Parent=gene-D5F92_RS11355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11355;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000019.1 cmsearch exon 1 631 . + . ID=exon-D5F92_RS11355-1;Parent=rna-D5F92_RS11355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11355;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000019.1 RefSeq gene 706 821 . + . ID=gene-D5F92_RS03030;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS03030;old_locus_tag=D5F92_03045 NZ_QYTJ01000019.1 cmsearch rRNA 706 821 . + . ID=rna-D5F92_RS03030;Parent=gene-D5F92_RS03030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS03030;product=5S ribosomal RNA NZ_QYTJ01000019.1 cmsearch exon 706 821 . + . ID=exon-D5F92_RS03030-1;Parent=rna-D5F92_RS03030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS03030;product=5S ribosomal RNA NZ_QYTJ01000019.1 RefSeq gene 827 900 . + . ID=gene-D5F92_RS03035;Name=D5F92_RS03035;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS03035;old_locus_tag=D5F92_03050 NZ_QYTJ01000019.1 tRNAscan-SE tRNA 827 900 . + . ID=rna-D5F92_RS03035;Parent=gene-D5F92_RS03035;anticodon=(pos:861..863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS03035;product=tRNA-Asn NZ_QYTJ01000019.1 tRNAscan-SE exon 827 900 . + . ID=exon-D5F92_RS03035-1;Parent=rna-D5F92_RS03035;anticodon=(pos:861..863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS03035;product=tRNA-Asn NZ_QYTJ01000019.1 RefSeq gene 1041 1892 . + . ID=gene-D5F92_RS03040;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=D5F92_RS03040;old_locus_tag=D5F92_03055 NZ_QYTJ01000019.1 Protein Homology CDS 1041 1892 . + 0 ID=cds-WP_000688172.1;Parent=gene-D5F92_RS03040;Dbxref=GenBank:WP_000688172.1;Name=WP_000688172.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688173.1;locus_tag=D5F92_RS03040;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000688172.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 1978 2421 . + . ID=gene-D5F92_RS03045;Name=D5F92_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03045;old_locus_tag=D5F92_03060 NZ_QYTJ01000019.1 Protein Homology CDS 1978 2421 . + 0 ID=cds-WP_000217076.1;Parent=gene-D5F92_RS03045;Dbxref=GenBank:WP_000217076.1;Name=WP_000217076.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986587.1;locus_tag=D5F92_RS03045;product=zinc-dependent MarR family transcriptional regulator;protein_id=WP_000217076.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 2424 3134 . + . ID=gene-D5F92_RS03050;Name=D5F92_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03050;old_locus_tag=D5F92_03065 NZ_QYTJ01000019.1 Protein Homology CDS 2424 3134 . + 0 ID=cds-WP_001269501.1;Parent=gene-D5F92_RS03050;Dbxref=GenBank:WP_001269501.1;Name=WP_001269501.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269500.1;locus_tag=D5F92_RS03050;product=metal ABC transporter ATP-binding protein;protein_id=WP_001269501.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 3124 3936 . + . ID=gene-D5F92_RS03055;Name=D5F92_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03055;old_locus_tag=D5F92_03070 NZ_QYTJ01000019.1 Protein Homology CDS 3124 3936 . + 0 ID=cds-WP_000923269.1;Parent=gene-D5F92_RS03055;Dbxref=GenBank:WP_000923269.1;Name=WP_000923269.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923271.1;locus_tag=D5F92_RS03055;product=metal ABC transporter permease;protein_id=WP_000923269.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 4147 5178 . - . ID=gene-D5F92_RS03060;Name=D5F92_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03060;old_locus_tag=D5F92_03075 NZ_QYTJ01000019.1 Protein Homology CDS 4147 5178 . - 0 ID=cds-WP_000777422.1;Parent=gene-D5F92_RS03060;Dbxref=GenBank:WP_000777422.1;Name=WP_000777422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767962.1;locus_tag=D5F92_RS03060;product=DNA/RNA non-specific endonuclease;protein_id=WP_000777422.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 5758 7017 . - . ID=gene-D5F92_RS03065;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=D5F92_RS03065;old_locus_tag=D5F92_03080 NZ_QYTJ01000019.1 Protein Homology CDS 5758 7017 . - 0 ID=cds-WP_001019849.1;Parent=gene-D5F92_RS03065;Dbxref=GenBank:WP_001019849.1;Name=WP_001019849.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058310.1;locus_tag=D5F92_RS03065;product=tyrosine--tRNA ligase;protein_id=WP_001019849.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 7128 9425 . + . ID=gene-D5F92_RS03070;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=D5F92_RS03070;old_locus_tag=D5F92_03085 NZ_QYTJ01000019.1 Protein Homology CDS 7128 9425 . + 0 ID=cds-WP_000472390.1;Parent=gene-D5F92_RS03070;Dbxref=GenBank:WP_000472390.1;Name=WP_000472390.1;gbkey=CDS;gene=pbp1b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646300.1;locus_tag=D5F92_RS03070;product=penicillin-binding protein PBP1B;protein_id=WP_000472390.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 9949 13524 . + . ID=gene-D5F92_RS03075;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=D5F92_RS03075;old_locus_tag=D5F92_03090 NZ_QYTJ01000019.1 Protein Homology CDS 9949 13524 . + 0 ID=cds-WP_016502428.1;Parent=gene-D5F92_RS03075;Dbxref=GenBank:WP_016502428.1;Name=WP_016502428.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907193.1;locus_tag=D5F92_RS03075;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_016502428.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 13641 17291 . + . ID=gene-D5F92_RS03080;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=D5F92_RS03080;old_locus_tag=D5F92_03095 NZ_QYTJ01000019.1 Protein Homology CDS 13641 17291 . + 0 ID=cds-WP_000228729.1;Parent=gene-D5F92_RS03080;Dbxref=GenBank:WP_000228729.1;Name=WP_000228729.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631755.1;locus_tag=D5F92_RS03080;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000228729.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 17405 17770 . + . ID=gene-D5F92_RS03085;Name=D5F92_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03085;old_locus_tag=D5F92_03100 NZ_QYTJ01000019.1 Protein Homology CDS 17405 17770 . + 0 ID=cds-WP_000285373.1;Parent=gene-D5F92_RS03085;Dbxref=GenBank:WP_000285373.1;Name=WP_000285373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285371.1;locus_tag=D5F92_RS03085;product=DUF1033 family protein;protein_id=WP_000285373.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 17942 18913 . + . ID=gene-D5F92_RS03095;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=D5F92_RS03095;old_locus_tag=D5F92_03110 NZ_QYTJ01000019.1 Protein Homology CDS 17942 18913 . + 0 ID=cds-WP_086163193.1;Parent=gene-D5F92_RS03095;Dbxref=GenBank:WP_086163193.1;Name=WP_086163193.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000250804.1;locus_tag=D5F92_RS03095;product=competence type IV pilus ATPase ComGA;protein_id=WP_086163193.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 18807 19850 . + . ID=gene-D5F92_RS03100;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=D5F92_RS03100;old_locus_tag=D5F92_03115 NZ_QYTJ01000019.1 Protein Homology CDS 18807 19850 . + 0 ID=cds-WP_257638778.1;Parent=gene-D5F92_RS03100;Dbxref=GenBank:WP_257638778.1;Name=WP_257638778.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074699.1;locus_tag=D5F92_RS03100;product=competence type IV pilus assembly protein ComGB;protein_id=WP_257638778.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 19847 20302 . + . ID=gene-D5F92_RS03105;Name=comGF;gbkey=Gene;gene=comGF;gene_biotype=protein_coding;locus_tag=D5F92_RS03105;old_locus_tag=D5F92_03120 NZ_QYTJ01000019.1 Protein Homology CDS 19847 20302 . + 0 ID=cds-WP_016502431.1;Parent=gene-D5F92_RS03105;Dbxref=GenBank:WP_016502431.1;Name=WP_016502431.1;gbkey=CDS;gene=comGF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793379.1;locus_tag=D5F92_RS03105;product=competence type IV pilus minor pilin ComGF;protein_id=WP_016502431.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 20280 20651 . + . ID=gene-D5F92_RS03110;Name=comGG;gbkey=Gene;gene=comGG;gene_biotype=protein_coding;locus_tag=D5F92_RS03110;old_locus_tag=D5F92_03125 NZ_QYTJ01000019.1 Protein Homology CDS 20280 20651 . + 0 ID=cds-WP_016502432.1;Parent=gene-D5F92_RS03110;Dbxref=GenBank:WP_016502432.1;Name=WP_016502432.1;gbkey=CDS;gene=comGG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000601101.1;locus_tag=D5F92_RS03110;product=competence type IV pilus minor pilin ComGG;protein_id=WP_016502432.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 20766 21740 . + . ID=gene-D5F92_RS03115;Name=D5F92_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03115;old_locus_tag=D5F92_03130 NZ_QYTJ01000019.1 Protein Homology CDS 20766 21740 . + 0 ID=cds-WP_016502433.1;Parent=gene-D5F92_RS03115;Dbxref=GenBank:WP_016502433.1;Name=WP_016502433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649274.1;locus_tag=D5F92_RS03115;product=class I SAM-dependent methyltransferase;protein_id=WP_016502433.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 21772 22965 . + . ID=gene-D5F92_RS03120;Name=D5F92_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03120;old_locus_tag=D5F92_03135 NZ_QYTJ01000019.1 Protein Homology CDS 21772 22965 . + 0 ID=cds-WP_000047534.1;Parent=gene-D5F92_RS03120;Dbxref=GenBank:WP_000047534.1;Name=WP_000047534.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047536.1;locus_tag=D5F92_RS03120;product=acetate kinase;protein_id=WP_000047534.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 23093 23300 . + . ID=gene-D5F92_RS03125;Name=D5F92_RS03125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03125;old_locus_tag=D5F92_03140;pseudo=true NZ_QYTJ01000019.1 Protein Homology CDS 23093 23300 . + 0 ID=cds-D5F92_RS03125;Parent=gene-D5F92_RS03125;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798241.1;locus_tag=D5F92_RS03125;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 23537 23992 . + . ID=gene-D5F92_RS03135;Name=D5F92_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03135;old_locus_tag=D5F92_03150 NZ_QYTJ01000019.1 Protein Homology CDS 23537 23992 . + 0 ID=cds-WP_124749063.1;Parent=gene-D5F92_RS03135;Dbxref=GenBank:WP_124749063.1;Name=WP_124749063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905672.1;locus_tag=D5F92_RS03135;product=hypothetical protein;protein_id=WP_124749063.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 24061 24726 . + . ID=gene-D5F92_RS03140;Name=D5F92_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03140;old_locus_tag=D5F92_03155 NZ_QYTJ01000019.1 Protein Homology CDS 24061 24726 . + 0 ID=cds-WP_016502436.1;Parent=gene-D5F92_RS03140;Dbxref=GenBank:WP_016502436.1;Name=WP_016502436.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008115.1;locus_tag=D5F92_RS03140;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016502436.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 24747 25517 . - . ID=gene-D5F92_RS03145;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=D5F92_RS03145;old_locus_tag=D5F92_03160 NZ_QYTJ01000019.1 Protein Homology CDS 24747 25517 . - 0 ID=cds-WP_016502437.1;Parent=gene-D5F92_RS03145;Dbxref=GenBank:WP_016502437.1;Name=WP_016502437.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480237.1;locus_tag=D5F92_RS03145;product=pyrroline-5-carboxylate reductase;protein_id=WP_016502437.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 25587 26654 . - . ID=gene-D5F92_RS03150;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=D5F92_RS03150;old_locus_tag=D5F92_03165 NZ_QYTJ01000019.1 Protein Homology CDS 25587 26654 . - 0 ID=cds-WP_016502438.1;Parent=gene-D5F92_RS03150;Dbxref=GenBank:WP_016502438.1;Name=WP_016502438.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281319.1;locus_tag=D5F92_RS03150;product=glutamyl aminopeptidase;protein_id=WP_016502438.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 26839 27078 . - . ID=gene-D5F92_RS03155;Name=D5F92_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03155;old_locus_tag=D5F92_03170 NZ_QYTJ01000019.1 Protein Homology CDS 26839 27078 . - 0 ID=cds-WP_000660180.1;Parent=gene-D5F92_RS03155;Dbxref=GenBank:WP_000660180.1;Name=WP_000660180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649272.1;locus_tag=D5F92_RS03155;product=hypothetical protein;protein_id=WP_000660180.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 27239 27523 . + . ID=gene-D5F92_RS03160;Name=D5F92_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03160;old_locus_tag=D5F92_03175 NZ_QYTJ01000019.1 Protein Homology CDS 27239 27523 . + 0 ID=cds-WP_016502440.1;Parent=gene-D5F92_RS03160;Dbxref=GenBank:WP_016502440.1;Name=WP_016502440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644219.1;locus_tag=D5F92_RS03160;product=DUF4651 domain-containing protein;protein_id=WP_016502440.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 27520 27843 . + . ID=gene-D5F92_RS03165;Name=D5F92_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03165;old_locus_tag=D5F92_03180 NZ_QYTJ01000019.1 Protein Homology CDS 27520 27843 . + 0 ID=cds-WP_000602783.1;Parent=gene-D5F92_RS03165;Dbxref=GenBank:WP_000602783.1;Name=WP_000602783.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602781.1;locus_tag=D5F92_RS03165;product=thioredoxin family protein;protein_id=WP_000602783.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 27876 28502 . + . ID=gene-D5F92_RS03170;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=D5F92_RS03170;old_locus_tag=D5F92_03185 NZ_QYTJ01000019.1 Protein Homology CDS 27876 28502 . + 0 ID=cds-WP_016502441.1;Parent=gene-D5F92_RS03170;Dbxref=GenBank:WP_016502441.1;Name=WP_016502441.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646647.1;locus_tag=D5F92_RS03170;product=YtpR family tRNA-binding protein;protein_id=WP_016502441.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 28556 29272 . - . ID=gene-D5F92_RS03175;Name=D5F92_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03175;old_locus_tag=D5F92_03190 NZ_QYTJ01000019.1 Protein Homology CDS 28556 29272 . - 0 ID=cds-WP_016480240.1;Parent=gene-D5F92_RS03175;Dbxref=GenBank:WP_016480240.1;Name=WP_016480240.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186175.1;locus_tag=D5F92_RS03175;product=class I SAM-dependent methyltransferase;protein_id=WP_016480240.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 29353 29748 . + . ID=gene-D5F92_RS03180;Name=D5F92_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03180;old_locus_tag=D5F92_03195 NZ_QYTJ01000019.1 Protein Homology CDS 29353 29748 . + 0 ID=cds-WP_000282447.1;Parent=gene-D5F92_RS03180;Dbxref=GenBank:WP_000282447.1;Name=WP_000282447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282448.1;locus_tag=D5F92_RS03180;product=single-stranded DNA-binding protein;protein_id=WP_000282447.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 29872 30516 . + . ID=gene-D5F92_RS03185;Name=D5F92_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03185;old_locus_tag=D5F92_03200 NZ_QYTJ01000019.1 Protein Homology CDS 29872 30516 . + 0 ID=cds-WP_016480241.1;Parent=gene-D5F92_RS03185;Dbxref=GenBank:WP_016480241.1;Name=WP_016480241.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416607.1;locus_tag=D5F92_RS03185;product=HAD family hydrolase;protein_id=WP_016480241.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 30543 32288 . + . ID=gene-D5F92_RS03190;Name=D5F92_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03190;old_locus_tag=D5F92_03205 NZ_QYTJ01000019.1 Protein Homology CDS 30543 32288 . + 0 ID=cds-WP_016502442.1;Parent=gene-D5F92_RS03190;Dbxref=GenBank:WP_016502442.1;Name=WP_016502442.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930326.1;locus_tag=D5F92_RS03190;product=LytS/YhcK type 5TM receptor domain-containing protein;protein_id=WP_016502442.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 32269 33009 . + . ID=gene-D5F92_RS03195;Name=D5F92_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03195;old_locus_tag=D5F92_03210 NZ_QYTJ01000019.1 Protein Homology CDS 32269 33009 . + 0 ID=cds-WP_000697630.1;Parent=gene-D5F92_RS03195;Dbxref=GenBank:WP_000697630.1;Name=WP_000697630.1;Ontology_term=GO:0000160,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631763.1;locus_tag=D5F92_RS03195;product=LytR/AlgR family response regulator transcription factor;protein_id=WP_000697630.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 33179 33634 . + . ID=gene-D5F92_RS03200;Name=D5F92_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03200;old_locus_tag=D5F92_03215 NZ_QYTJ01000019.1 Protein Homology CDS 33179 33634 . + 0 ID=cds-WP_016480242.1;Parent=gene-D5F92_RS03200;Dbxref=GenBank:WP_016480242.1;Name=WP_016480242.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480242.1;locus_tag=D5F92_RS03200;product=CidA/LrgA family protein;protein_id=WP_016480242.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 33636 34364 . + . ID=gene-D5F92_RS03205;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=D5F92_RS03205;old_locus_tag=D5F92_03220 NZ_QYTJ01000019.1 Protein Homology CDS 33636 34364 . + 0 ID=cds-WP_016502443.1;Parent=gene-D5F92_RS03205;Dbxref=GenBank:WP_016502443.1;Name=WP_016502443.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421725.1;locus_tag=D5F92_RS03205;product=antiholin-like protein LrgB;protein_id=WP_016502443.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 34606 36234 . + . ID=gene-D5F92_RS03215;Name=D5F92_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03215;old_locus_tag=D5F92_03230 NZ_QYTJ01000019.1 Protein Homology CDS 34606 36234 . + 0 ID=cds-WP_000170504.1;Parent=gene-D5F92_RS03215;Dbxref=GenBank:WP_000170504.1;Name=WP_000170504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771899.1;locus_tag=D5F92_RS03215;product=ABC transporter substrate-binding protein;protein_id=WP_000170504.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 36347 37324 . + . ID=gene-D5F92_RS03220;Name=D5F92_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03220;old_locus_tag=D5F92_03235 NZ_QYTJ01000019.1 Protein Homology CDS 36347 37324 . + 0 ID=cds-WP_000680645.1;Parent=gene-D5F92_RS03220;Dbxref=GenBank:WP_000680645.1;Name=WP_000680645.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680642.1;locus_tag=D5F92_RS03220;product=ABC transporter permease;protein_id=WP_000680645.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 37321 38142 . + . ID=gene-D5F92_RS03225;Name=D5F92_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03225;old_locus_tag=D5F92_03240 NZ_QYTJ01000019.1 Protein Homology CDS 37321 38142 . + 0 ID=cds-WP_000603397.1;Parent=gene-D5F92_RS03225;Dbxref=GenBank:WP_000603397.1;Name=WP_000603397.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631767.1;locus_tag=D5F92_RS03225;product=ABC transporter permease;protein_id=WP_000603397.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 38154 38957 . + . ID=gene-D5F92_RS03230;Name=D5F92_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03230;old_locus_tag=D5F92_03245 NZ_QYTJ01000019.1 Protein Homology CDS 38154 38957 . + 0 ID=cds-WP_124749322.1;Parent=gene-D5F92_RS03230;Dbxref=GenBank:WP_124749322.1;Name=WP_124749322.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140979.1;locus_tag=D5F92_RS03230;product=ATP-binding cassette domain-containing protein;protein_id=WP_124749322.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 38941 39567 . + . ID=gene-D5F92_RS03235;Name=D5F92_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03235;old_locus_tag=D5F92_03250 NZ_QYTJ01000019.1 Protein Homology CDS 38941 39567 . + 0 ID=cds-WP_000171306.1;Parent=gene-D5F92_RS03235;Dbxref=GenBank:WP_000171306.1;Name=WP_000171306.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932323.1;locus_tag=D5F92_RS03235;product=ABC transporter ATP-binding protein;protein_id=WP_000171306.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 39850 41880 . + . ID=gene-D5F92_RS03240;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=D5F92_RS03240;old_locus_tag=D5F92_03255 NZ_QYTJ01000019.1 Protein Homology CDS 39850 41880 . + 0 ID=cds-WP_016480244.1;Parent=gene-D5F92_RS03240;Dbxref=GenBank:WP_016480244.1;Name=WP_016480244.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480244.1;locus_tag=D5F92_RS03240;product=PTS system trehalose-specific EIIBC component;protein_id=WP_016480244.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 42102 43727 . + . ID=gene-D5F92_RS03245;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=D5F92_RS03245;old_locus_tag=D5F92_03260 NZ_QYTJ01000019.1 Protein Homology CDS 42102 43727 . + 0 ID=cds-WP_016480245.1;Parent=gene-D5F92_RS03245;Dbxref=GenBank:WP_016480245.1;Name=WP_016480245.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151019.1;locus_tag=D5F92_RS03245;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_016480245.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 43943 45979 . + . ID=gene-D5F92_RS03250;Name=D5F92_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03250;old_locus_tag=D5F92_03265 NZ_QYTJ01000019.1 Protein Homology CDS 43943 45979 . + 0 ID=cds-WP_016480246.1;Parent=gene-D5F92_RS03250;Dbxref=GenBank:WP_016480246.1;Name=WP_016480246.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228187.1;locus_tag=D5F92_RS03250;product=BglG family transcription antiterminator;protein_id=WP_016480246.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 45982 46266 . + . ID=gene-D5F92_RS03255;Name=D5F92_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03255;old_locus_tag=D5F92_03270 NZ_QYTJ01000019.1 Protein Homology CDS 45982 46266 . + 0 ID=cds-WP_000944235.1;Parent=gene-D5F92_RS03255;Dbxref=GenBank:WP_000944235.1;Name=WP_000944235.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089859.1;locus_tag=D5F92_RS03255;product=PTS sugar transporter subunit IIB;protein_id=WP_000944235.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 46279 47634 . + . ID=gene-D5F92_RS03260;Name=D5F92_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03260;old_locus_tag=D5F92_03275 NZ_QYTJ01000019.1 Protein Homology CDS 46279 47634 . + 0 ID=cds-WP_000677351.1;Parent=gene-D5F92_RS03260;Dbxref=GenBank:WP_000677351.1;Name=WP_000677351.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646152.1;locus_tag=D5F92_RS03260;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000677351.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 47637 48494 . + . ID=gene-D5F92_RS03265;Name=D5F92_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03265;old_locus_tag=D5F92_03280 NZ_QYTJ01000019.1 Protein Homology CDS 47637 48494 . + 0 ID=cds-WP_124749321.1;Parent=gene-D5F92_RS03265;Dbxref=GenBank:WP_124749321.1;Name=WP_124749321.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648167.1;locus_tag=D5F92_RS03265;product=transketolase;protein_id=WP_124749321.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 48491 49420 . + . ID=gene-D5F92_RS03270;Name=D5F92_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03270;old_locus_tag=D5F92_03285 NZ_QYTJ01000019.1 Protein Homology CDS 48491 49420 . + 0 ID=cds-WP_016480249.1;Parent=gene-D5F92_RS03270;Dbxref=GenBank:WP_016480249.1;Name=WP_016480249.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203818.1;locus_tag=D5F92_RS03270;product=transketolase family protein;protein_id=WP_016480249.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 49529 50788 . + . ID=gene-D5F92_RS03275;Name=D5F92_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03275;old_locus_tag=D5F92_03290 NZ_QYTJ01000019.1 Protein Homology CDS 49529 50788 . + 0 ID=cds-WP_124749320.1;Parent=gene-D5F92_RS03275;Dbxref=GenBank:WP_124749320.1;Name=WP_124749320.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203075.1;locus_tag=D5F92_RS03275;product=ferredoxin reductase family protein;protein_id=WP_124749320.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 50876 51145 . + . ID=gene-D5F92_RS03280;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=D5F92_RS03280;old_locus_tag=D5F92_03295 NZ_QYTJ01000019.1 Protein Homology CDS 50876 51145 . + 0 ID=cds-WP_001018249.1;Parent=gene-D5F92_RS03280;Dbxref=GenBank:WP_001018249.1;Name=WP_001018249.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=D5F92_RS03280;product=30S ribosomal protein S15;protein_id=WP_001018249.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 51526 53655 . + . ID=gene-D5F92_RS03285;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=D5F92_RS03285;old_locus_tag=D5F92_03300 NZ_QYTJ01000019.1 Protein Homology CDS 51526 53655 . + 0 ID=cds-WP_124749319.1;Parent=gene-D5F92_RS03285;Dbxref=GenBank:WP_124749319.1;Name=WP_124749319.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480251.1;locus_tag=D5F92_RS03285;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_124749319.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 53657 54409 . + . ID=gene-D5F92_RS03290;Name=D5F92_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03290;old_locus_tag=D5F92_03305 NZ_QYTJ01000019.1 Protein Homology CDS 53657 54409 . + 0 ID=cds-WP_124749318.1;Parent=gene-D5F92_RS03290;Dbxref=GenBank:WP_124749318.1;Name=WP_124749318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480252.1;locus_tag=D5F92_RS03290;product=SseB family protein;protein_id=WP_124749318.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 54418 55002 . + . ID=gene-D5F92_RS03295;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=D5F92_RS03295;old_locus_tag=D5F92_03310 NZ_QYTJ01000019.1 Protein Homology CDS 54418 55002 . + 0 ID=cds-WP_000539954.1;Parent=gene-D5F92_RS03295;Dbxref=GenBank:WP_000539954.1;Name=WP_000539954.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539954.1;locus_tag=D5F92_RS03295;product=serine O-acetyltransferase;protein_id=WP_000539954.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 55012 55194 . + . ID=gene-D5F92_RS03300;Name=D5F92_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03300;old_locus_tag=D5F92_03315 NZ_QYTJ01000019.1 Protein Homology CDS 55012 55194 . + 0 ID=cds-WP_000656477.1;Parent=gene-D5F92_RS03300;Dbxref=GenBank:WP_000656477.1;Name=WP_000656477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656477.1;locus_tag=D5F92_RS03300;product=hypothetical protein;protein_id=WP_000656477.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 55191 56534 . + . ID=gene-D5F92_RS03305;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=D5F92_RS03305;old_locus_tag=D5F92_03320 NZ_QYTJ01000019.1 Protein Homology CDS 55191 56534 . + 0 ID=cds-WP_016480253.1;Parent=gene-D5F92_RS03305;Dbxref=GenBank:WP_016480253.1;Name=WP_016480253.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591125.1;locus_tag=D5F92_RS03305;product=cysteine--tRNA ligase;protein_id=WP_016480253.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 56527 56913 . + . ID=gene-D5F92_RS03310;Name=D5F92_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03310;old_locus_tag=D5F92_03325 NZ_QYTJ01000019.1 Protein Homology CDS 56527 56913 . + 0 ID=cds-WP_000568031.1;Parent=gene-D5F92_RS03310;Dbxref=GenBank:WP_000568031.1;Name=WP_000568031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568031.1;locus_tag=D5F92_RS03310;product=Mini-ribonuclease 3;protein_id=WP_000568031.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 57016 57771 . + . ID=gene-D5F92_RS03315;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=D5F92_RS03315;old_locus_tag=D5F92_03330 NZ_QYTJ01000019.1 Protein Homology CDS 57016 57771 . + 0 ID=cds-WP_000178025.1;Parent=gene-D5F92_RS03315;Dbxref=GenBank:WP_000178025.1;Name=WP_000178025.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178020.1;locus_tag=D5F92_RS03315;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_000178025.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 57768 58286 . + . ID=gene-D5F92_RS03320;Name=D5F92_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03320;old_locus_tag=D5F92_03335 NZ_QYTJ01000019.1 Protein Homology CDS 57768 58286 . + 0 ID=cds-WP_000716636.1;Parent=gene-D5F92_RS03320;Dbxref=GenBank:WP_000716636.1;Name=WP_000716636.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716639.1;locus_tag=D5F92_RS03320;product=NYN domain-containing protein;protein_id=WP_000716636.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 58380 59240 . + . ID=gene-D5F92_RS03325;Name=D5F92_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03325;old_locus_tag=D5F92_03340 NZ_QYTJ01000019.1 Protein Homology CDS 58380 59240 . + 0 ID=cds-WP_000143135.1;Parent=gene-D5F92_RS03325;Dbxref=GenBank:WP_000143135.1;Name=WP_000143135.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771178.1;locus_tag=D5F92_RS03325;product=DegV family protein;protein_id=WP_000143135.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 59778 59897 . + . ID=gene-D5F92_RS03335;Name=D5F92_RS03335;end_range=59897,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03335;old_locus_tag=D5F92_03350;partial=true;pseudo=true NZ_QYTJ01000019.1 Protein Homology CDS 59778 59897 . + 0 ID=cds-D5F92_RS03335;Parent=gene-D5F92_RS03335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=59897,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002278327.1;locus_tag=D5F92_RS03335;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 60122 60568 . + . ID=gene-D5F92_RS03340;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=D5F92_RS03340;old_locus_tag=D5F92_03355 NZ_QYTJ01000019.1 Protein Homology CDS 60122 60568 . + 0 ID=cds-WP_016480256.1;Parent=gene-D5F92_RS03340;Dbxref=GenBank:WP_016480256.1;Name=WP_016480256.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=D5F92_RS03340;product=50S ribosomal protein L13;protein_id=WP_016480256.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 60589 60981 . + . ID=gene-D5F92_RS03345;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=D5F92_RS03345;old_locus_tag=D5F92_03360 NZ_QYTJ01000019.1 Protein Homology CDS 60589 60981 . + 0 ID=cds-WP_000035940.1;Parent=gene-D5F92_RS03345;Dbxref=GenBank:WP_000035940.1;Name=WP_000035940.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=D5F92_RS03345;product=30S ribosomal protein S9;protein_id=WP_000035940.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 61088 62308 . - . ID=gene-D5F92_RS03350;Name=D5F92_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03350;old_locus_tag=D5F92_03365 NZ_QYTJ01000019.1 Protein Homology CDS 61088 62308 . - 0 ID=cds-WP_016480257.1;Parent=gene-D5F92_RS03350;Dbxref=GenBank:WP_016480257.1;Name=WP_016480257.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480257.1;locus_tag=D5F92_RS03350;product=tyrosine-type recombinase/integrase;protein_id=WP_016480257.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 62318 62590 . - . ID=gene-D5F92_RS03355;Name=D5F92_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03355;old_locus_tag=D5F92_03370 NZ_QYTJ01000019.1 Protein Homology CDS 62318 62590 . - 0 ID=cds-WP_016480258.1;Parent=gene-D5F92_RS03355;Dbxref=GenBank:WP_016480258.1;Name=WP_016480258.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889645.1;locus_tag=D5F92_RS03355;product=helix-turn-helix domain-containing protein;protein_id=WP_016480258.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 62730 63830 . - . ID=gene-D5F92_RS03360;Name=D5F92_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03360;old_locus_tag=D5F92_03375 NZ_QYTJ01000019.1 Protein Homology CDS 62730 63830 . - 0 ID=cds-WP_016480259.1;Parent=gene-D5F92_RS03360;Dbxref=GenBank:WP_016480259.1;Name=WP_016480259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480259.1;locus_tag=D5F92_RS03360;product=phage tail tip lysozyme;protein_id=WP_016480259.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 63847 64071 . - . ID=gene-D5F92_RS03365;Name=D5F92_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03365;old_locus_tag=D5F92_03380 NZ_QYTJ01000019.1 Protein Homology CDS 63847 64071 . - 0 ID=cds-WP_016480260.1;Parent=gene-D5F92_RS03365;Dbxref=GenBank:WP_016480260.1;Name=WP_016480260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020816.1;locus_tag=D5F92_RS03365;product=hypothetical protein;protein_id=WP_016480260.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 64071 64259 . - . ID=gene-D5F92_RS03370;Name=D5F92_RS03370;end_range=64259,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03370;old_locus_tag=D5F92_03385;partial=true;pseudo=true NZ_QYTJ01000019.1 Protein Homology CDS 64071 64259 . - 0 ID=cds-D5F92_RS03370;Parent=gene-D5F92_RS03370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=64259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335070.1;locus_tag=D5F92_RS03370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 64339 65483 . + . ID=gene-D5F92_RS03375;Name=D5F92_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03375;old_locus_tag=D5F92_03390 NZ_QYTJ01000019.1 Protein Homology CDS 64339 64570 . + 0 ID=cds-WP_124749327.1;Parent=gene-D5F92_RS03375;Dbxref=GenBank:WP_124749327.1;Name=WP_124749327.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS03375;product=IS3 family transposase;protein_id=WP_124749327.1;transl_table=11 NZ_QYTJ01000019.1 Protein Homology CDS 64570 65483 . + 2 ID=cds-WP_124749327.1;Parent=gene-D5F92_RS03375;Dbxref=GenBank:WP_124749327.1;Name=WP_124749327.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS03375;product=IS3 family transposase;protein_id=WP_124749327.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 65518 65799 . - . ID=gene-D5F92_RS03380;Name=D5F92_RS03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03380;old_locus_tag=D5F92_03395;partial=true;pseudo=true;start_range=.,65518 NZ_QYTJ01000019.1 Protein Homology CDS 65518 65799 . - 0 ID=cds-D5F92_RS03380;Parent=gene-D5F92_RS03380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818561.1;locus_tag=D5F92_RS03380;partial=true;product=major tail protein;pseudo=true;start_range=.,65518;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 65802 66128 . - . ID=gene-D5F92_RS03385;Name=D5F92_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03385;old_locus_tag=D5F92_03400 NZ_QYTJ01000019.1 Protein Homology CDS 65802 66128 . - 0 ID=cds-WP_001209972.1;Parent=gene-D5F92_RS03385;Dbxref=GenBank:WP_001209972.1;Name=WP_001209972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646693.1;locus_tag=D5F92_RS03385;product=hypothetical protein;protein_id=WP_001209972.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 66137 66505 . - . ID=gene-D5F92_RS03390;Name=D5F92_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03390;old_locus_tag=D5F92_03405 NZ_QYTJ01000019.1 Protein Homology CDS 66137 66505 . - 0 ID=cds-WP_000161247.1;Parent=gene-D5F92_RS03390;Dbxref=GenBank:WP_000161247.1;Name=WP_000161247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161242.1;locus_tag=D5F92_RS03390;product=HK97 gp10 family phage protein;protein_id=WP_000161247.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 66498 66836 . - . ID=gene-D5F92_RS03395;Name=D5F92_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03395;old_locus_tag=D5F92_03410 NZ_QYTJ01000019.1 Protein Homology CDS 66498 66836 . - 0 ID=cds-WP_124749514.1;Parent=gene-D5F92_RS03395;Dbxref=GenBank:WP_124749514.1;Name=WP_124749514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684963.1;locus_tag=D5F92_RS03395;product=head-tail adaptor protein;protein_id=WP_124749514.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 66836 67093 . - . ID=gene-D5F92_RS03400;Name=D5F92_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03400;old_locus_tag=D5F92_03415 NZ_QYTJ01000019.1 Protein Homology CDS 66836 67093 . - 0 ID=cds-WP_000988604.1;Parent=gene-D5F92_RS03400;Dbxref=GenBank:WP_000988604.1;Name=WP_000988604.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646690.1;locus_tag=D5F92_RS03400;product=head-tail connector protein;protein_id=WP_000988604.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 67090 68298 . - . ID=gene-D5F92_RS03405;Name=D5F92_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03405;old_locus_tag=D5F92_03420 NZ_QYTJ01000019.1 Protein Homology CDS 67090 68298 . - 0 ID=cds-WP_124749512.1;Parent=gene-D5F92_RS03405;Dbxref=GenBank:WP_124749512.1;Name=WP_124749512.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646689.1;locus_tag=D5F92_RS03405;product=phage major capsid protein;protein_id=WP_124749512.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 68312 69010 . - . ID=gene-D5F92_RS03410;Name=D5F92_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03410;old_locus_tag=D5F92_03425 NZ_QYTJ01000019.1 Protein Homology CDS 68312 69010 . - 0 ID=cds-WP_124749510.1;Parent=gene-D5F92_RS03410;Dbxref=GenBank:WP_124749510.1;Name=WP_124749510.1;Ontology_term=GO:0046797,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003084543.1;locus_tag=D5F92_RS03410;product=head maturation protease%2C ClpP-related;protein_id=WP_124749510.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 69003 70292 . - . ID=gene-D5F92_RS03415;Name=D5F92_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03415;old_locus_tag=D5F92_03430 NZ_QYTJ01000019.1 Protein Homology CDS 69003 70292 . - 0 ID=cds-WP_124749508.1;Parent=gene-D5F92_RS03415;Dbxref=GenBank:WP_124749508.1;Name=WP_124749508.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648322.1;locus_tag=D5F92_RS03415;product=phage portal protein;protein_id=WP_124749508.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 70360 70686 . - . ID=gene-D5F92_RS03420;Name=D5F92_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03420;old_locus_tag=D5F92_03435 NZ_QYTJ01000019.1 Protein Homology CDS 70360 70686 . - 0 ID=cds-WP_000149740.1;Parent=gene-D5F92_RS03420;Dbxref=GenBank:WP_000149740.1;Name=WP_000149740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149740.1;locus_tag=D5F92_RS03420;product=hypothetical protein;protein_id=WP_000149740.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 70712 71083 . - . ID=gene-D5F92_RS03425;Name=D5F92_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03425;old_locus_tag=D5F92_03440 NZ_QYTJ01000019.1 Protein Homology CDS 70712 71083 . - 0 ID=cds-WP_124749506.1;Parent=gene-D5F92_RS03425;Dbxref=GenBank:WP_124749506.1;Name=WP_124749506.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221831.1;locus_tag=D5F92_RS03425;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_124749506.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 71080 71337 . - . ID=gene-D5F92_RS03430;Name=D5F92_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03430;old_locus_tag=D5F92_03445 NZ_QYTJ01000019.1 Protein Homology CDS 71080 71337 . - 0 ID=cds-WP_001166641.1;Parent=gene-D5F92_RS03430;Dbxref=GenBank:WP_001166641.1;Name=WP_001166641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166641.1;locus_tag=D5F92_RS03430;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001166641.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 71408 73000 . - . ID=gene-D5F92_RS03435;Name=D5F92_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03435;old_locus_tag=D5F92_03450 NZ_QYTJ01000019.1 Protein Homology CDS 71408 73000 . - 0 ID=cds-WP_124749504.1;Parent=gene-D5F92_RS03435;Dbxref=GenBank:WP_124749504.1;Name=WP_124749504.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268711.1;locus_tag=D5F92_RS03435;product=terminase large subunit;protein_id=WP_124749504.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 72997 73470 . - . ID=gene-D5F92_RS03440;Name=D5F92_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03440;old_locus_tag=D5F92_03455 NZ_QYTJ01000019.1 Protein Homology CDS 72997 73470 . - 0 ID=cds-WP_000290862.1;Parent=gene-D5F92_RS03440;Dbxref=GenBank:WP_000290862.1;Name=WP_000290862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290865.1;locus_tag=D5F92_RS03440;product=phage terminase small subunit P27 family;protein_id=WP_000290862.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 73522 73971 . - . ID=gene-D5F92_RS03445;Name=D5F92_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03445;old_locus_tag=D5F92_03460 NZ_QYTJ01000019.1 Protein Homology CDS 73522 73971 . - 0 ID=cds-WP_000342209.1;Parent=gene-D5F92_RS03445;Dbxref=GenBank:WP_000342209.1;Name=WP_000342209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342210.1;locus_tag=D5F92_RS03445;product=DUF4314 domain-containing protein;protein_id=WP_000342209.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 73982 74236 . - . ID=gene-D5F92_RS03450;Name=D5F92_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03450;old_locus_tag=D5F92_03465 NZ_QYTJ01000019.1 Protein Homology CDS 73982 74236 . - 0 ID=cds-WP_124749502.1;Parent=gene-D5F92_RS03450;Dbxref=GenBank:WP_124749502.1;Name=WP_124749502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164537.1;locus_tag=D5F92_RS03450;product=hypothetical protein;protein_id=WP_124749502.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 74314 75568 . - . ID=gene-D5F92_RS03455;Name=D5F92_RS03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03455;old_locus_tag=D5F92_03470;pseudo=true NZ_QYTJ01000019.1 Protein Homology CDS 74314 75568 . - 0 ID=cds-D5F92_RS03455;Parent=gene-D5F92_RS03455;Note=frameshifted;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176349.1;locus_tag=D5F92_RS03455;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 75565 76821 . - . ID=gene-D5F92_RS03460;Name=D5F92_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03460;old_locus_tag=D5F92_03475 NZ_QYTJ01000019.1 Protein Homology CDS 75565 76821 . - 0 ID=cds-WP_124749500.1;Parent=gene-D5F92_RS03460;Dbxref=GenBank:WP_124749500.1;Name=WP_124749500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211617.1;locus_tag=D5F92_RS03460;product=site-specific DNA-methyltransferase;protein_id=WP_124749500.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 76793 77248 . - . ID=gene-D5F92_RS03465;Name=D5F92_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03465;old_locus_tag=D5F92_03480 NZ_QYTJ01000019.1 Protein Homology CDS 76793 77248 . - 0 ID=cds-WP_000999418.1;Parent=gene-D5F92_RS03465;Dbxref=GenBank:WP_000999418.1;Name=WP_000999418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999419.1;locus_tag=D5F92_RS03465;product=hypothetical protein;protein_id=WP_000999418.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 77568 77933 . - . ID=gene-D5F92_RS03470;Name=D5F92_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03470;old_locus_tag=D5F92_03485 NZ_QYTJ01000019.1 Protein Homology CDS 77568 77933 . - 0 ID=cds-WP_001138027.1;Parent=gene-D5F92_RS03470;Dbxref=GenBank:WP_001138027.1;Name=WP_001138027.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138031.1;locus_tag=D5F92_RS03470;product=HNH endonuclease;protein_id=WP_001138027.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 77935 78972 . - . ID=gene-D5F92_RS03475;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=D5F92_RS03475;old_locus_tag=D5F92_03490 NZ_QYTJ01000019.1 Protein Homology CDS 77935 78972 . - 0 ID=cds-WP_124749498.1;Parent=gene-D5F92_RS03475;Dbxref=GenBank:WP_124749498.1;Name=WP_124749498.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058380.1;locus_tag=D5F92_RS03475;product=methionine adenosyltransferase;protein_id=WP_124749498.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq pseudogene 79026 79208 . - . ID=gene-D5F92_RS03480;Name=D5F92_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03480;old_locus_tag=D5F92_03495;pseudo=true NZ_QYTJ01000019.1 Protein Homology CDS 79026 79208 . - 0 ID=cds-D5F92_RS03480;Parent=gene-D5F92_RS03480;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646674.1;locus_tag=D5F92_RS03480;product=DUF6900 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 79371 79868 . - . ID=gene-D5F92_RS03485;Name=D5F92_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03485;old_locus_tag=D5F92_03500 NZ_QYTJ01000019.1 Protein Homology CDS 79371 79868 . - 0 ID=cds-WP_000356300.1;Parent=gene-D5F92_RS03485;Dbxref=GenBank:WP_000356300.1;Name=WP_000356300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361944.1;locus_tag=D5F92_RS03485;product=hypothetical protein;protein_id=WP_000356300.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 79861 81237 . - . ID=gene-D5F92_RS03490;Name=D5F92_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03490;old_locus_tag=D5F92_03505 NZ_QYTJ01000019.1 Protein Homology CDS 79861 81237 . - 0 ID=cds-WP_000768924.1;Parent=gene-D5F92_RS03490;Dbxref=GenBank:WP_000768924.1;Name=WP_000768924.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268649.1;locus_tag=D5F92_RS03490;product=SNF2-related protein;protein_id=WP_000768924.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 81218 81499 . - . ID=gene-D5F92_RS03495;Name=D5F92_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03495;old_locus_tag=D5F92_03510 NZ_QYTJ01000019.1 Protein Homology CDS 81218 81499 . - 0 ID=cds-WP_124749496.1;Parent=gene-D5F92_RS03495;Dbxref=GenBank:WP_124749496.1;Name=WP_124749496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208489.1;locus_tag=D5F92_RS03495;product=VRR-NUC domain-containing protein;protein_id=WP_124749496.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 81779 84061 . - . ID=gene-D5F92_RS03500;Name=D5F92_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03500;old_locus_tag=D5F92_03515 NZ_QYTJ01000019.1 Protein Homology CDS 81779 84061 . - 0 ID=cds-WP_124785425.1;Parent=gene-D5F92_RS03500;Dbxref=GenBank:WP_124785425.1;Name=WP_124785425.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768029.1;locus_tag=D5F92_RS03500;product=phage/plasmid primase%2C P4 family;protein_id=WP_124785425.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 84349 84483 . + . ID=gene-D5F92_RS11380;Name=D5F92_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11380 NZ_QYTJ01000019.1 Protein Homology CDS 84349 84483 . + 0 ID=cds-WP_001262782.1;Parent=gene-D5F92_RS11380;Dbxref=GenBank:WP_001262782.1;Name=WP_001262782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262782.1;locus_tag=D5F92_RS11380;product=hypothetical protein;protein_id=WP_001262782.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 84458 84781 . + . ID=gene-D5F92_RS03505;Name=D5F92_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03505;old_locus_tag=D5F92_03520 NZ_QYTJ01000019.1 Protein Homology CDS 84458 84781 . + 0 ID=cds-WP_000041407.1;Parent=gene-D5F92_RS03505;Dbxref=GenBank:WP_000041407.1;Name=WP_000041407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077671.1;locus_tag=D5F92_RS03505;product=hypothetical protein;protein_id=WP_000041407.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 84774 85895 . + . ID=gene-D5F92_RS03510;Name=D5F92_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03510;old_locus_tag=D5F92_03525 NZ_QYTJ01000019.1 Protein Homology CDS 84774 85895 . + 0 ID=cds-WP_001913444.1;Parent=gene-D5F92_RS03510;Dbxref=GenBank:WP_001913444.1;Name=WP_001913444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181333.1;locus_tag=D5F92_RS03510;product=DUF2800 domain-containing protein;protein_id=WP_001913444.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 85900 86463 . + . ID=gene-D5F92_RS03515;Name=D5F92_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03515;old_locus_tag=D5F92_03530 NZ_QYTJ01000019.1 Protein Homology CDS 85900 86463 . + 0 ID=cds-WP_000208946.1;Parent=gene-D5F92_RS03515;Dbxref=GenBank:WP_000208946.1;Name=WP_000208946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208945.1;locus_tag=D5F92_RS03515;product=DUF2815 family protein;protein_id=WP_000208946.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 86480 86644 . + . ID=gene-D5F92_RS11290;Name=D5F92_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11290 NZ_QYTJ01000019.1 Protein Homology CDS 86480 86644 . + 0 ID=cds-WP_000464240.1;Parent=gene-D5F92_RS11290;Dbxref=GenBank:WP_000464240.1;Name=WP_000464240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464240.1;locus_tag=D5F92_RS11290;product=hypothetical protein;protein_id=WP_000464240.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 86694 88649 . + . ID=gene-D5F92_RS03520;Name=D5F92_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03520;old_locus_tag=D5F92_03535 NZ_QYTJ01000019.1 Protein Homology CDS 86694 88649 . + 0 ID=cds-WP_124749492.1;Parent=gene-D5F92_RS03520;Dbxref=GenBank:WP_124749492.1;Name=WP_124749492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769760.1;locus_tag=D5F92_RS03520;product=DNA polymerase;protein_id=WP_124749492.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 88688 89257 . - . ID=gene-D5F92_RS03525;Name=D5F92_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03525;old_locus_tag=D5F92_03540 NZ_QYTJ01000019.1 Protein Homology CDS 88688 89257 . - 0 ID=cds-WP_001122250.1;Parent=gene-D5F92_RS03525;Dbxref=GenBank:WP_001122250.1;Name=WP_001122250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122248.1;locus_tag=D5F92_RS03525;product=hypothetical protein;protein_id=WP_001122250.1;transl_table=11 NZ_QYTJ01000019.1 RefSeq gene 89666 91451 . - . ID=gene-D5F92_RS03530;Name=D5F92_RS03530;end_range=91451,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03530;old_locus_tag=D5F92_03545;partial=true NZ_QYTJ01000019.1 Protein Homology CDS 89666 91451 . - 1 ID=cds-WP_124785427.1;Parent=gene-D5F92_RS03530;Dbxref=GenBank:WP_124785427.1;Name=WP_124785427.1;end_range=91451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459849.1;locus_tag=D5F92_RS03530;partial=true;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_124785427.1;transl_table=11 ##sequence-region NZ_QYTJ01000002.1 1 26047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000002.1 RefSeq region 1 26047 . + . ID=NZ_QYTJ01000002.1:1..26047;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000002.1 RefSeq gene 103 606 . + . ID=gene-D5F92_RS00450;Name=D5F92_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00450;old_locus_tag=D5F92_00450 NZ_QYTJ01000002.1 Protein Homology CDS 103 606 . + 0 ID=cds-WP_000773456.1;Parent=gene-D5F92_RS00450;Dbxref=GenBank:WP_000773456.1;Name=WP_000773456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285166.1;locus_tag=D5F92_RS00450;product=hypothetical protein;protein_id=WP_000773456.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq pseudogene 658 843 . - . ID=gene-D5F92_RS00455;Name=D5F92_RS00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00455;old_locus_tag=D5F92_00455;pseudo=true NZ_QYTJ01000002.1 Protein Homology CDS 658 843 . - 0 ID=cds-D5F92_RS00455;Parent=gene-D5F92_RS00455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368100.1;locus_tag=D5F92_RS00455;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 915 1640 . + . ID=gene-D5F92_RS00460;Name=D5F92_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00460;old_locus_tag=D5F92_00460 NZ_QYTJ01000002.1 Protein Homology CDS 915 1640 . + 0 ID=cds-WP_000912307.1;Parent=gene-D5F92_RS00460;Dbxref=GenBank:WP_000912307.1;Name=WP_000912307.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647293.1;locus_tag=D5F92_RS00460;product=ABC transporter ATP-binding protein;protein_id=WP_000912307.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 1642 2676 . + . ID=gene-D5F92_RS00465;Name=D5F92_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00465;old_locus_tag=D5F92_00465 NZ_QYTJ01000002.1 Protein Homology CDS 1642 2676 . + 0 ID=cds-WP_016502539.1;Parent=gene-D5F92_RS00465;Dbxref=GenBank:WP_016502539.1;Name=WP_016502539.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732713.1;locus_tag=D5F92_RS00465;product=ABC transporter permease;protein_id=WP_016502539.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 2734 3534 . + . ID=gene-D5F92_RS00470;Name=ccrZ;gbkey=Gene;gene=ccrZ;gene_biotype=protein_coding;locus_tag=D5F92_RS00470;old_locus_tag=D5F92_00470 NZ_QYTJ01000002.1 Protein Homology CDS 2734 3534 . + 0 ID=cds-WP_000155919.1;Parent=gene-D5F92_RS00470;Dbxref=GenBank:WP_000155919.1;Name=WP_000155919.1;Ontology_term=GO:0006270,GO:0051726,GO:0004747,GO:0016773,GO:0019200;gbkey=CDS;gene=ccrZ;go_function=ribokinase activity|0004747||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of cell cycle|0051726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155919.1;locus_tag=D5F92_RS00470;product=cell cycle regulator CcrZ;protein_id=WP_000155919.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 3524 4159 . + . ID=gene-D5F92_RS00475;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=D5F92_RS00475;old_locus_tag=D5F92_00475 NZ_QYTJ01000002.1 Protein Homology CDS 3524 4159 . + 0 ID=cds-WP_086163233.1;Parent=gene-D5F92_RS00475;Dbxref=GenBank:WP_086163233.1;Name=WP_086163233.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266023.1;locus_tag=D5F92_RS00475;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_086163233.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 4203 4289 . + . ID=gene-D5F92_RS00480;Name=D5F92_RS00480;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00480;old_locus_tag=D5F92_00480 NZ_QYTJ01000002.1 tRNAscan-SE tRNA 4203 4289 . + . ID=rna-D5F92_RS00480;Parent=gene-D5F92_RS00480;anticodon=(pos:4237..4239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00480;product=tRNA-Ser NZ_QYTJ01000002.1 tRNAscan-SE exon 4203 4289 . + . ID=exon-D5F92_RS00480-1;Parent=rna-D5F92_RS00480;anticodon=(pos:4237..4239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00480;product=tRNA-Ser NZ_QYTJ01000002.1 RefSeq gene 4612 4983 . + . ID=gene-D5F92_RS00485;Name=D5F92_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00485;old_locus_tag=D5F92_00485 NZ_QYTJ01000002.1 Protein Homology CDS 4612 4983 . + 0 ID=cds-WP_109897977.1;Parent=gene-D5F92_RS00485;Dbxref=GenBank:WP_109897977.1;Name=WP_109897977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282473.1;locus_tag=D5F92_RS00485;product=hypothetical protein;protein_id=WP_109897977.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq pseudogene 5462 5904 . + . ID=gene-D5F92_RS00490;Name=D5F92_RS00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00490;old_locus_tag=D5F92_00490;pseudo=true NZ_QYTJ01000002.1 Protein Homology CDS 5462 5904 . + 0 ID=cds-D5F92_RS00490;Parent=gene-D5F92_RS00490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447421.1;locus_tag=D5F92_RS00490;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 6007 6171 . + . ID=gene-D5F92_RS11270;Name=D5F92_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11270 NZ_QYTJ01000002.1 Protein Homology CDS 6007 6171 . + 0 ID=cds-WP_000166480.1;Parent=gene-D5F92_RS11270;Dbxref=GenBank:WP_000166480.1;Name=WP_000166480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166480.1;locus_tag=D5F92_RS11270;product=hypothetical protein;protein_id=WP_000166480.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 6173 7198 . + . ID=gene-D5F92_RS00495;Name=D5F92_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00495;old_locus_tag=D5F92_00495 NZ_QYTJ01000002.1 Protein Homology CDS 6173 7198 . + 0 ID=cds-WP_124759305.1;Parent=gene-D5F92_RS00495;Dbxref=GenBank:WP_124759305.1;Name=WP_124759305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649293.1;locus_tag=D5F92_RS00495;product=replication initiator protein A;protein_id=WP_124759305.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 7200 7385 . + . ID=gene-D5F92_RS00500;Name=D5F92_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00500;old_locus_tag=D5F92_00500 NZ_QYTJ01000002.1 Protein Homology CDS 7200 7385 . + 0 ID=cds-WP_000938679.1;Parent=gene-D5F92_RS00500;Dbxref=GenBank:WP_000938679.1;Name=WP_000938679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938679.1;locus_tag=D5F92_RS00500;product=hypothetical protein;protein_id=WP_000938679.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 7382 7579 . + . ID=gene-D5F92_RS00505;Name=D5F92_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00505;old_locus_tag=D5F92_00505 NZ_QYTJ01000002.1 Protein Homology CDS 7382 7579 . + 0 ID=cds-WP_000208122.1;Parent=gene-D5F92_RS00505;Dbxref=GenBank:WP_000208122.1;Name=WP_000208122.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208121.1;locus_tag=D5F92_RS00505;product=helix-turn-helix transcriptional regulator;protein_id=WP_000208122.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 7961 8260 . + . ID=gene-D5F92_RS00510;Name=D5F92_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00510;old_locus_tag=D5F92_00510 NZ_QYTJ01000002.1 Protein Homology CDS 7961 8260 . + 0 ID=cds-WP_000129105.1;Parent=gene-D5F92_RS00510;Dbxref=GenBank:WP_000129105.1;Name=WP_000129105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129103.1;locus_tag=D5F92_RS00510;product=hypothetical protein;protein_id=WP_000129105.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 8277 10541 . + . ID=gene-D5F92_RS00515;Name=D5F92_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00515;old_locus_tag=D5F92_00515 NZ_QYTJ01000002.1 Protein Homology CDS 8277 10541 . + 0 ID=cds-WP_001071828.1;Parent=gene-D5F92_RS00515;Dbxref=GenBank:WP_001071828.1;Name=WP_001071828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071828.1;locus_tag=D5F92_RS00515;product=C39 family peptidase;protein_id=WP_001071828.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 10618 11310 . + . ID=gene-D5F92_RS00520;Name=D5F92_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00520;old_locus_tag=D5F92_00520 NZ_QYTJ01000002.1 Protein Homology CDS 10618 11310 . + 0 ID=cds-WP_000163069.1;Parent=gene-D5F92_RS00520;Dbxref=GenBank:WP_000163069.1;Name=WP_000163069.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044662.1;locus_tag=D5F92_RS00520;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_000163069.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 11362 14163 . + . ID=gene-D5F92_RS00525;Name=D5F92_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00525;old_locus_tag=D5F92_00525 NZ_QYTJ01000002.1 Protein Homology CDS 11362 14163 . + 0 ID=cds-WP_124759306.1;Parent=gene-D5F92_RS00525;Dbxref=GenBank:WP_124759306.1;Name=WP_124759306.1;Ontology_term=GO:0018262,GO:0005509;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;go_process=isopeptide cross-linking|0018262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088025.1;locus_tag=D5F92_RS00525;product=SspB-related isopeptide-forming adhesin;protein_id=WP_124759306.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 14398 14883 . + . ID=gene-D5F92_RS00530;Name=D5F92_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00530;old_locus_tag=D5F92_00530 NZ_QYTJ01000002.1 Protein Homology CDS 14398 14883 . + 0 ID=cds-WP_000409772.1;Parent=gene-D5F92_RS00530;Dbxref=GenBank:WP_000409772.1;Name=WP_000409772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000409772.1;locus_tag=D5F92_RS00530;product=hypothetical protein;protein_id=WP_000409772.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 14971 15195 . + . ID=gene-D5F92_RS00535;Name=D5F92_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00535;old_locus_tag=D5F92_00535 NZ_QYTJ01000002.1 Protein Homology CDS 14971 15195 . + 0 ID=cds-WP_001195397.1;Parent=gene-D5F92_RS00535;Dbxref=GenBank:WP_001195397.1;Name=WP_001195397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195397.1;locus_tag=D5F92_RS00535;product=hypothetical protein;protein_id=WP_001195397.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 15214 15960 . + . ID=gene-D5F92_RS00540;Name=D5F92_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00540;old_locus_tag=D5F92_00540 NZ_QYTJ01000002.1 Protein Homology CDS 15214 15960 . + 0 ID=cds-WP_124759307.1;Parent=gene-D5F92_RS00540;Dbxref=GenBank:WP_124759307.1;Name=WP_124759307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076663.1;locus_tag=D5F92_RS00540;product=hypothetical protein;protein_id=WP_124759307.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 15972 16538 . + . ID=gene-D5F92_RS00545;Name=D5F92_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00545;old_locus_tag=D5F92_00545 NZ_QYTJ01000002.1 Protein Homology CDS 15972 16538 . + 0 ID=cds-WP_124759308.1;Parent=gene-D5F92_RS00545;Dbxref=GenBank:WP_124759308.1;Name=WP_124759308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183175.1;locus_tag=D5F92_RS00545;product=hypothetical protein;protein_id=WP_124759308.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 16572 16790 . + . ID=gene-D5F92_RS00550;Name=D5F92_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00550;old_locus_tag=D5F92_00550 NZ_QYTJ01000002.1 Protein Homology CDS 16572 16790 . + 0 ID=cds-WP_027970231.1;Parent=gene-D5F92_RS00550;Dbxref=GenBank:WP_027970231.1;Name=WP_027970231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729752.1;locus_tag=D5F92_RS00550;product=hypothetical protein;protein_id=WP_027970231.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 17550 17897 . + . ID=gene-D5F92_RS00555;Name=D5F92_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00555;old_locus_tag=D5F92_00560 NZ_QYTJ01000002.1 Protein Homology CDS 17550 17897 . + 0 ID=cds-WP_124759323.1;Parent=gene-D5F92_RS00555;Dbxref=GenBank:WP_124759323.1;Name=WP_124759323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197452.1;locus_tag=D5F92_RS00555;product=PrgI family protein;protein_id=WP_124759323.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 17857 20211 . + . ID=gene-D5F92_RS00560;Name=D5F92_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00560;old_locus_tag=D5F92_00565 NZ_QYTJ01000002.1 Protein Homology CDS 17857 20211 . + 0 ID=cds-WP_124759309.1;Parent=gene-D5F92_RS00560;Dbxref=GenBank:WP_124759309.1;Name=WP_124759309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089520.1;locus_tag=D5F92_RS00560;product=VirB4-like conjugal transfer ATPase%2C CD1110 family;protein_id=WP_124759309.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 20231 22864 . + . ID=gene-D5F92_RS00565;Name=D5F92_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00565;old_locus_tag=D5F92_00570 NZ_QYTJ01000002.1 Protein Homology CDS 20231 22864 . + 0 ID=cds-WP_124759310.1;Parent=gene-D5F92_RS00565;Dbxref=GenBank:WP_124759310.1;Name=WP_124759310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272937.1;locus_tag=D5F92_RS00565;product=phage tail tip lysozyme;protein_id=WP_124759310.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 22892 23527 . + . ID=gene-D5F92_RS00570;Name=D5F92_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00570;old_locus_tag=D5F92_00575 NZ_QYTJ01000002.1 Protein Homology CDS 22892 23527 . + 0 ID=cds-WP_180383438.1;Parent=gene-D5F92_RS00570;Dbxref=GenBank:WP_180383438.1;Name=WP_180383438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644985.1;locus_tag=D5F92_RS00570;product=hypothetical protein;protein_id=WP_180383438.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 23524 23796 . + . ID=gene-D5F92_RS00575;Name=D5F92_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00575;old_locus_tag=D5F92_00580 NZ_QYTJ01000002.1 Protein Homology CDS 23524 23796 . + 0 ID=cds-WP_037580874.1;Parent=gene-D5F92_RS00575;Dbxref=GenBank:WP_037580874.1;Name=WP_037580874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167343.1;locus_tag=D5F92_RS00575;product=hypothetical protein;protein_id=WP_037580874.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 23750 24592 . + . ID=gene-D5F92_RS00580;Name=D5F92_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00580;old_locus_tag=D5F92_00585 NZ_QYTJ01000002.1 Protein Homology CDS 23750 24592 . + 0 ID=cds-WP_124749578.1;Parent=gene-D5F92_RS00580;Dbxref=GenBank:WP_124749578.1;Name=WP_124749578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286085.1;locus_tag=D5F92_RS00580;product=hypothetical protein;protein_id=WP_124749578.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 24605 25123 . + . ID=gene-D5F92_RS00585;Name=D5F92_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00585;old_locus_tag=D5F92_00590 NZ_QYTJ01000002.1 Protein Homology CDS 24605 25123 . + 0 ID=cds-WP_124749579.1-2;Parent=gene-D5F92_RS00585;Dbxref=GenBank:WP_124749579.1;Name=WP_124749579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088851.1;locus_tag=D5F92_RS00585;product=hypothetical protein;protein_id=WP_124749579.1;transl_table=11 NZ_QYTJ01000002.1 RefSeq gene 25120 26047 . + . ID=gene-D5F92_RS00590;Name=D5F92_RS00590;end_range=26047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00590;old_locus_tag=D5F92_00595;partial=true NZ_QYTJ01000002.1 Protein Homology CDS 25120 26047 . + 0 ID=cds-WP_185690639.1;Parent=gene-D5F92_RS00590;Dbxref=GenBank:WP_185690639.1;Name=WP_185690639.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;end_range=26047,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197180.1;locus_tag=D5F92_RS00590;partial=true;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_185690639.1;transl_table=11 ##sequence-region NZ_QYTJ01000020.1 1 215978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000020.1 RefSeq region 1 215978 . + . ID=NZ_QYTJ01000020.1:1..215978;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000020.1 RefSeq pseudogene 1 457 . - . ID=gene-D5F92_RS03535;Name=D5F92_RS03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03535;old_locus_tag=D5F92_03550;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000020.1 Protein Homology CDS 1 457 . - 0 ID=cds-D5F92_RS03535;Parent=gene-D5F92_RS03535;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS03535;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 536 721 . + . ID=gene-D5F92_RS03540;Name=D5F92_RS03540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03540;old_locus_tag=D5F92_03555;partial=true;pseudo=true;start_range=.,536 NZ_QYTJ01000020.1 Protein Homology CDS 536 721 . + 0 ID=cds-D5F92_RS03540;Parent=gene-D5F92_RS03540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647433.1;locus_tag=D5F92_RS03540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,536;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 726 1574 . + . ID=gene-D5F92_RS03545;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=D5F92_RS03545;old_locus_tag=D5F92_03560 NZ_QYTJ01000020.1 Protein Homology CDS 726 1574 . + 0 ID=cds-WP_086163516.1;Parent=gene-D5F92_RS03545;Dbxref=GenBank:WP_086163516.1;Name=WP_086163516.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7c;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922510.1;locus_tag=D5F92_RS03545;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_086163516.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 1576 2247 . + . ID=gene-D5F92_RS03550;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=D5F92_RS03550;old_locus_tag=D5F92_03565 NZ_QYTJ01000020.1 Protein Homology CDS 1576 2247 . + 0 ID=cds-WP_000262367.1;Parent=gene-D5F92_RS03550;Dbxref=GenBank:WP_000262367.1;Name=WP_000262367.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262367.1;locus_tag=D5F92_RS03550;product=CRISPR-associated protein Cas4;protein_id=WP_000262367.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 2244 3248 . + . ID=gene-D5F92_RS03555;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=D5F92_RS03555;old_locus_tag=D5F92_03570 NZ_QYTJ01000020.1 Protein Homology CDS 2244 3248 . + 0 ID=cds-WP_016502590.1;Parent=gene-D5F92_RS03555;Dbxref=GenBank:WP_016502590.1;Name=WP_016502590.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019314881.1;locus_tag=D5F92_RS03555;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_016502590.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 3259 3552 . + . ID=gene-D5F92_RS03560;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=D5F92_RS03560;old_locus_tag=D5F92_03575 NZ_QYTJ01000020.1 Protein Homology CDS 3259 3552 . + 0 ID=cds-WP_000989528.1;Parent=gene-D5F92_RS03560;Dbxref=GenBank:WP_000989528.1;Name=WP_000989528.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002280569.1;locus_tag=D5F92_RS03560;product=CRISPR-associated endonuclease Cas2;protein_id=WP_000989528.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 3879 4100 . + . ID=gene-D5F92_RS11565;Name=D5F92_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11565 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 3879 4100 . + 0 ID=cds-WP_446539751.1;Parent=gene-D5F92_RS11565;Dbxref=GenBank:WP_446539751.1;Name=WP_446539751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS11565;product=hypothetical protein;protein_id=WP_446539751.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 4198 5157 . + . ID=gene-D5F92_RS03565;Name=D5F92_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03565;old_locus_tag=D5F92_03580 NZ_QYTJ01000020.1 Protein Homology CDS 4198 5157 . + 0 ID=cds-WP_016502592.1;Parent=gene-D5F92_RS03565;Dbxref=GenBank:WP_016502592.1;Name=WP_016502592.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631803.1;locus_tag=D5F92_RS03565;product=Gfo/Idh/MocA family protein;protein_id=WP_016502592.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 5318 6220 . + . ID=gene-D5F92_RS03570;Name=D5F92_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03570;old_locus_tag=D5F92_03585 NZ_QYTJ01000020.1 Protein Homology CDS 5318 6220 . + 0 ID=cds-WP_016502593.1;Parent=gene-D5F92_RS03570;Dbxref=GenBank:WP_016502593.1;Name=WP_016502593.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492950.1;locus_tag=D5F92_RS03570;product=magnesium transporter CorA family protein;protein_id=WP_016502593.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 6380 7444 . + . ID=gene-D5F92_RS03575;Name=D5F92_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03575;old_locus_tag=D5F92_03590 NZ_QYTJ01000020.1 Protein Homology CDS 6380 7444 . + 0 ID=cds-WP_000021293.1;Parent=gene-D5F92_RS03575;Dbxref=GenBank:WP_000021293.1;Name=WP_000021293.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649463.1;locus_tag=D5F92_RS03575;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000021293.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 7559 8551 . + . ID=gene-D5F92_RS03580;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=D5F92_RS03580;old_locus_tag=D5F92_03595 NZ_QYTJ01000020.1 Protein Homology CDS 7559 8551 . + 0 ID=cds-WP_016502595.1;Parent=gene-D5F92_RS03580;Dbxref=GenBank:WP_016502595.1;Name=WP_016502595.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502595.1;locus_tag=D5F92_RS03580;product=aspartate--ammonia ligase;protein_id=WP_016502595.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 8596 9018 . - . ID=gene-D5F92_RS03585;Name=D5F92_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03585;old_locus_tag=D5F92_03600;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 8596 9018 . - 0 ID=cds-D5F92_RS03585;Parent=gene-D5F92_RS03585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001893380.1;locus_tag=D5F92_RS03585;product=bacteriocin transport accessory protein;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 9175 9714 . + . ID=gene-D5F92_RS03590;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=D5F92_RS03590;old_locus_tag=D5F92_03605 NZ_QYTJ01000020.1 Protein Homology CDS 9175 9714 . + 0 ID=cds-WP_086163248.1;Parent=gene-D5F92_RS03590;Dbxref=GenBank:WP_086163248.1;Name=WP_086163248.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058402.1;locus_tag=D5F92_RS03590;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_086163248.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 9726 10016 . + . ID=gene-D5F92_RS03595;Name=D5F92_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03595;old_locus_tag=D5F92_03610 NZ_QYTJ01000020.1 Protein Homology CDS 9726 10016 . + 0 ID=cds-WP_000384889.1;Parent=gene-D5F92_RS03595;Dbxref=GenBank:WP_000384889.1;Name=WP_000384889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384890.1;locus_tag=D5F92_RS03595;product=hypothetical protein;protein_id=WP_000384889.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 10013 10498 . + . ID=gene-D5F92_RS03600;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=D5F92_RS03600;old_locus_tag=D5F92_03615 NZ_QYTJ01000020.1 Protein Homology CDS 10013 10498 . + 0 ID=cds-WP_016480407.1;Parent=gene-D5F92_RS03600;Dbxref=GenBank:WP_016480407.1;Name=WP_016480407.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161892.1;locus_tag=D5F92_RS03600;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_016480407.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 10488 11561 . + . ID=gene-D5F92_RS03605;Name=D5F92_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03605;old_locus_tag=D5F92_03620 NZ_QYTJ01000020.1 Protein Homology CDS 10488 11561 . + 0 ID=cds-WP_016480408.1;Parent=gene-D5F92_RS03605;Dbxref=GenBank:WP_016480408.1;Name=WP_016480408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790656.1;locus_tag=D5F92_RS03605;product=SepM family pheromone-processing serine protease;protein_id=WP_016480408.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 11636 12969 . + . ID=gene-D5F92_RS03610;Name=D5F92_RS03610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03610;old_locus_tag=D5F92_03625;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 11636 12969 . + 0 ID=cds-D5F92_RS03610;Parent=gene-D5F92_RS03610;Note=frameshifted;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644500.1;locus_tag=D5F92_RS03610;product=bifunctional metallophosphatase/5'-nucleotidase;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 13038 13616 . + . ID=gene-D5F92_RS03615;Name=D5F92_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03615;old_locus_tag=D5F92_03630 NZ_QYTJ01000020.1 Protein Homology CDS 13038 13616 . + 0 ID=cds-WP_001224500.1;Parent=gene-D5F92_RS03615;Dbxref=GenBank:WP_001224500.1;Name=WP_001224500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647065.1;locus_tag=D5F92_RS03615;product=YutD family protein;protein_id=WP_001224500.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 13667 14773 . + . ID=gene-D5F92_RS03620;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=D5F92_RS03620;old_locus_tag=D5F92_03635 NZ_QYTJ01000020.1 Protein Homology CDS 13667 14773 . + 0 ID=cds-WP_001124994.1;Parent=gene-D5F92_RS03620;Dbxref=GenBank:WP_001124994.1;Name=WP_001124994.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124995.1;locus_tag=D5F92_RS03620;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_001124994.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 14773 15288 . + . ID=gene-D5F92_RS03625;Name=D5F92_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03625;old_locus_tag=D5F92_03640 NZ_QYTJ01000020.1 Protein Homology CDS 14773 15288 . + 0 ID=cds-WP_000919803.1;Parent=gene-D5F92_RS03625;Dbxref=GenBank:WP_000919803.1;Name=WP_000919803.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631809.1;locus_tag=D5F92_RS03625;product=VanZ family protein;protein_id=WP_000919803.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 15467 17212 . + . ID=gene-D5F92_RS03630;Name=D5F92_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03630;old_locus_tag=D5F92_03645 NZ_QYTJ01000020.1 Protein Homology CDS 15467 17212 . + 0 ID=cds-WP_016502599.1;Parent=gene-D5F92_RS03630;Dbxref=GenBank:WP_016502599.1;Name=WP_016502599.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063634.1;locus_tag=D5F92_RS03630;product=ABC transporter ATP-binding protein;protein_id=WP_016502599.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 17202 18941 . + . ID=gene-D5F92_RS03635;Name=D5F92_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03635;old_locus_tag=D5F92_03650 NZ_QYTJ01000020.1 Protein Homology CDS 17202 18941 . + 0 ID=cds-WP_016502600.1;Parent=gene-D5F92_RS03635;Dbxref=GenBank:WP_016502600.1;Name=WP_016502600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058404.1;locus_tag=D5F92_RS03635;product=ABC transporter ATP-binding protein;protein_id=WP_016502600.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 19069 19635 . + . ID=gene-D5F92_RS03640;Name=D5F92_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03640;old_locus_tag=D5F92_03655 NZ_QYTJ01000020.1 Protein Homology CDS 19069 19635 . + 0 ID=cds-WP_124785430.1;Parent=gene-D5F92_RS03640;Dbxref=GenBank:WP_124785430.1;Name=WP_124785430.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647068.1;locus_tag=D5F92_RS03640;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_124785430.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 19703 20242 . - . ID=gene-D5F92_RS03645;Name=D5F92_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03645;old_locus_tag=D5F92_03660 NZ_QYTJ01000020.1 Protein Homology CDS 19703 20242 . - 0 ID=cds-WP_000857893.1;Parent=gene-D5F92_RS03645;Dbxref=GenBank:WP_000857893.1;Name=WP_000857893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857893.1;locus_tag=D5F92_RS03645;product=biotin transporter BioY;protein_id=WP_000857893.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 20243 21235 . - . ID=gene-D5F92_RS03650;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=D5F92_RS03650;old_locus_tag=D5F92_03665 NZ_QYTJ01000020.1 Protein Homology CDS 20243 21235 . - 0 ID=cds-WP_000009965.1;Parent=gene-D5F92_RS03650;Dbxref=GenBank:WP_000009965.1;Name=WP_000009965.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009960.1;locus_tag=D5F92_RS03650;product=biotin synthase BioB;protein_id=WP_000009965.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 21360 21875 . + . ID=gene-D5F92_RS03655;Name=D5F92_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03655;old_locus_tag=D5F92_03670 NZ_QYTJ01000020.1 Protein Homology CDS 21360 21875 . + 0 ID=cds-WP_016502602.1;Parent=gene-D5F92_RS03655;Dbxref=GenBank:WP_016502602.1;Name=WP_016502602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732606.1;locus_tag=D5F92_RS03655;product=hypothetical protein;protein_id=WP_016502602.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 21865 22980 . + . ID=gene-D5F92_RS03660;Name=D5F92_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03660;old_locus_tag=D5F92_03675 NZ_QYTJ01000020.1 Protein Homology CDS 21865 22980 . + 0 ID=cds-WP_016502603.1;Parent=gene-D5F92_RS03660;Dbxref=GenBank:WP_016502603.1;Name=WP_016502603.1;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796101.1;locus_tag=D5F92_RS03660;product=thiolase family protein;protein_id=WP_016502603.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 22973 24202 . + . ID=gene-D5F92_RS03665;Name=D5F92_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03665;old_locus_tag=D5F92_03680 NZ_QYTJ01000020.1 Protein Homology CDS 22973 24202 . + 0 ID=cds-WP_124749087.1;Parent=gene-D5F92_RS03665;Dbxref=GenBank:WP_124749087.1;Name=WP_124749087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631813.1;locus_tag=D5F92_RS03665;product=AMP-binding protein;protein_id=WP_124749087.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 24315 24947 . + . ID=gene-D5F92_RS03670;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=D5F92_RS03670;old_locus_tag=D5F92_03685 NZ_QYTJ01000020.1 Protein Homology CDS 24315 24947 . + 0 ID=cds-WP_000949176.1;Parent=gene-D5F92_RS03670;Dbxref=GenBank:WP_000949176.1;Name=WP_000949176.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949179.1;locus_tag=D5F92_RS03670;product=endonuclease III;protein_id=WP_000949176.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 24948 25343 . - . ID=gene-D5F92_RS03675;Name=D5F92_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03675;old_locus_tag=D5F92_03690 NZ_QYTJ01000020.1 Protein Homology CDS 24948 25343 . - 0 ID=cds-WP_001884316.1;Parent=gene-D5F92_RS03675;Dbxref=GenBank:WP_001884316.1;Name=WP_001884316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001884316.1;locus_tag=D5F92_RS03675;product=prepilin peptidase;protein_id=WP_001884316.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 25498 25707 . + . ID=gene-D5F92_RS03680;Name=D5F92_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03680;old_locus_tag=D5F92_03695 NZ_QYTJ01000020.1 Protein Homology CDS 25498 25707 . + 0 ID=cds-WP_000865866.1;Parent=gene-D5F92_RS03680;Dbxref=GenBank:WP_000865866.1;Name=WP_000865866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865866.1;locus_tag=D5F92_RS03680;product=YqgQ family protein;protein_id=WP_000865866.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 25704 26672 . + . ID=gene-D5F92_RS03685;Name=D5F92_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03685;old_locus_tag=D5F92_03700 NZ_QYTJ01000020.1 Protein Homology CDS 25704 26672 . + 0 ID=cds-WP_000038547.1;Parent=gene-D5F92_RS03685;Dbxref=GenBank:WP_000038547.1;Name=WP_000038547.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038549.1;locus_tag=D5F92_RS03685;product=ROK family glucokinase;protein_id=WP_000038547.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 26684 27064 . + . ID=gene-D5F92_RS03690;Name=D5F92_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03690;old_locus_tag=D5F92_03705 NZ_QYTJ01000020.1 Protein Homology CDS 26684 27064 . + 0 ID=cds-WP_000367664.1;Parent=gene-D5F92_RS03690;Dbxref=GenBank:WP_000367664.1;Name=WP_000367664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480417.1;locus_tag=D5F92_RS03690;product=rhodanese-like domain-containing protein;protein_id=WP_000367664.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 27296 29137 . + . ID=gene-D5F92_RS03695;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=D5F92_RS03695;old_locus_tag=D5F92_03710 NZ_QYTJ01000020.1 Protein Homology CDS 27296 29137 . + 0 ID=cds-WP_000183433.1;Parent=gene-D5F92_RS03695;Dbxref=GenBank:WP_000183433.1;Name=WP_000183433.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381299.1;locus_tag=D5F92_RS03695;product=translational GTPase TypA;protein_id=WP_000183433.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 29182 29427 . + . ID=gene-D5F92_RS03700;Name=D5F92_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03700;old_locus_tag=D5F92_03715 NZ_QYTJ01000020.1 Protein Homology CDS 29182 29427 . + 0 ID=cds-WP_000499533.1;Parent=gene-D5F92_RS03700;Dbxref=GenBank:WP_000499533.1;Name=WP_000499533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499534.1;locus_tag=D5F92_RS03700;product=DUF3165 family protein;protein_id=WP_000499533.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 29557 30912 . + . ID=gene-D5F92_RS03705;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=D5F92_RS03705;old_locus_tag=D5F92_03720 NZ_QYTJ01000020.1 Protein Homology CDS 29557 30912 . + 0 ID=cds-WP_016502606.1;Parent=gene-D5F92_RS03705;Dbxref=GenBank:WP_016502606.1;Name=WP_016502606.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849675.1;locus_tag=D5F92_RS03705;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_016502606.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 30915 31991 . + . ID=gene-D5F92_RS03710;Name=D5F92_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03710;old_locus_tag=D5F92_03725 NZ_QYTJ01000020.1 Protein Homology CDS 30915 31991 . + 0 ID=cds-WP_016502607.1;Parent=gene-D5F92_RS03710;Dbxref=GenBank:WP_016502607.1;Name=WP_016502607.1;Ontology_term=GO:0005975,GO:0007049,GO:0008360,GO:0009252,GO:0030259,GO:0051301,GO:0071555,GO:0050511,GO:0051991,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA,UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2%2C6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity|0051991||IEA;go_process=carbohydrate metabolic process|0005975||IEA,cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,obsolete lipid glycosylation|0030259||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649469.1;locus_tag=D5F92_RS03710;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_016502607.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 31995 33131 . + . ID=gene-D5F92_RS03715;Name=D5F92_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03715;old_locus_tag=D5F92_03730 NZ_QYTJ01000020.1 Protein Homology CDS 31995 33131 . + 0 ID=cds-WP_001124862.1;Parent=gene-D5F92_RS03715;Dbxref=GenBank:WP_001124862.1;Name=WP_001124862.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124859.1;locus_tag=D5F92_RS03715;product=cell division protein FtsQ/DivIB;protein_id=WP_001124862.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 33404 34597 . + . ID=gene-D5F92_RS03720;Name=ftsA;end_range=34597,.;gbkey=Gene;gene=ftsA;gene_biotype=pseudogene;locus_tag=D5F92_RS03720;old_locus_tag=D5F92_03735;partial=true;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 33404 34597 . + 0 ID=cds-D5F92_RS03720;Parent=gene-D5F92_RS03720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043093,GO:0005515,GO:0005524;end_range=34597,.;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983860.1;locus_tag=D5F92_RS03720;partial=true;product=cell division protein FtsA;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 34571 34777 . + . ID=gene-D5F92_RS11525;Name=D5F92_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11525 NZ_QYTJ01000020.1 Protein Homology CDS 34571 34777 . + 0 ID=cds-WP_370443801.1;Parent=gene-D5F92_RS11525;Dbxref=GenBank:WP_370443801.1;Name=WP_370443801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023409.6;locus_tag=D5F92_RS11525;product=cell division protein FtsA C-terminal domain-containing protein;protein_id=WP_370443801.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 34799 36079 . + . ID=gene-D5F92_RS03725;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=D5F92_RS03725;old_locus_tag=D5F92_03740 NZ_QYTJ01000020.1 Protein Homology CDS 34799 36079 . + 0 ID=cds-WP_000232007.1;Parent=gene-D5F92_RS03725;Dbxref=GenBank:WP_000232007.1;Name=WP_000232007.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650336.1;locus_tag=D5F92_RS03725;product=cell division protein FtsZ;protein_id=WP_000232007.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 36085 36759 . + . ID=gene-D5F92_RS03730;Name=D5F92_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03730;old_locus_tag=D5F92_03745 NZ_QYTJ01000020.1 Protein Homology CDS 36085 36759 . + 0 ID=cds-WP_016502608.1;Parent=gene-D5F92_RS03730;Dbxref=GenBank:WP_016502608.1;Name=WP_016502608.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981484.1;locus_tag=D5F92_RS03730;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_016502608.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 36771 37376 . + . ID=gene-D5F92_RS03735;Name=D5F92_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03735;old_locus_tag=D5F92_03750 NZ_QYTJ01000020.1 Protein Homology CDS 36771 37376 . + 0 ID=cds-WP_001185362.1;Parent=gene-D5F92_RS03735;Dbxref=GenBank:WP_001185362.1;Name=WP_001185362.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185364.1;locus_tag=D5F92_RS03735;product=cell division protein SepF;protein_id=WP_001185362.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 37379 37633 . + . ID=gene-D5F92_RS03740;Name=D5F92_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03740;old_locus_tag=D5F92_03755 NZ_QYTJ01000020.1 Protein Homology CDS 37379 37633 . + 0 ID=cds-WP_000604717.1;Parent=gene-D5F92_RS03740;Dbxref=GenBank:WP_000604717.1;Name=WP_000604717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604718.1;locus_tag=D5F92_RS03740;product=YggT family protein;protein_id=WP_000604717.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 37635 38423 . + . ID=gene-D5F92_RS03745;Name=D5F92_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03745;old_locus_tag=D5F92_03760 NZ_QYTJ01000020.1 Protein Homology CDS 37635 38423 . + 0 ID=cds-WP_016502609.1;Parent=gene-D5F92_RS03745;Dbxref=GenBank:WP_016502609.1;Name=WP_016502609.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649471.1;locus_tag=D5F92_RS03745;product=YlmH family RNA-binding protein;protein_id=WP_016502609.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 38433 39203 . + . ID=gene-D5F92_RS03750;Name=D5F92_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03750;old_locus_tag=D5F92_03765 NZ_QYTJ01000020.1 Protein Homology CDS 38433 39203 . + 0 ID=cds-WP_124749474.1;Parent=gene-D5F92_RS03750;Dbxref=GenBank:WP_124749474.1;Name=WP_124749474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131466.1;locus_tag=D5F92_RS03750;product=DivIVA domain-containing protein;protein_id=WP_124749474.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 39488 42280 . + . ID=gene-D5F92_RS03755;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=D5F92_RS03755;old_locus_tag=D5F92_03770 NZ_QYTJ01000020.1 Protein Homology CDS 39488 42280 . + 0 ID=cds-WP_016502610.1;Parent=gene-D5F92_RS03755;Dbxref=GenBank:WP_016502610.1;Name=WP_016502610.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768163.1;locus_tag=D5F92_RS03755;product=isoleucine--tRNA ligase;protein_id=WP_016502610.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 42397 42699 . - . ID=gene-D5F92_RS03760;Name=D5F92_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03760;old_locus_tag=D5F92_03775 NZ_QYTJ01000020.1 Protein Homology CDS 42397 42699 . - 0 ID=cds-WP_001237035.1;Parent=gene-D5F92_RS03760;Dbxref=GenBank:WP_001237035.1;Name=WP_001237035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647579.1;locus_tag=D5F92_RS03760;product=DUF1827 family protein;protein_id=WP_001237035.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 42763 43218 . - . ID=gene-D5F92_RS03765;Name=D5F92_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03765;old_locus_tag=D5F92_03780 NZ_QYTJ01000020.1 Protein Homology CDS 42763 43218 . - 0 ID=cds-WP_000184290.1;Parent=gene-D5F92_RS03765;Dbxref=GenBank:WP_000184290.1;Name=WP_000184290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184293.1;locus_tag=D5F92_RS03765;product=NUDIX hydrolase;protein_id=WP_000184290.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 43404 45665 . - . ID=gene-D5F92_RS03770;Name=D5F92_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03770;old_locus_tag=D5F92_03785 NZ_QYTJ01000020.1 Protein Homology CDS 43404 45665 . - 0 ID=cds-WP_016502611.1;Parent=gene-D5F92_RS03770;Dbxref=GenBank:WP_016502611.1;Name=WP_016502611.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650651.1;locus_tag=D5F92_RS03770;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_016502611.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 45963 46193 . + . ID=gene-D5F92_RS03780;Name=D5F92_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03780;old_locus_tag=D5F92_03795 NZ_QYTJ01000020.1 Protein Homology CDS 45963 46193 . + 0 ID=cds-WP_000443582.1;Parent=gene-D5F92_RS03780;Dbxref=GenBank:WP_000443582.1;Name=WP_000443582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592360.1;locus_tag=D5F92_RS03780;product=DUF1797 family protein;protein_id=WP_000443582.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 46334 47026 . + . ID=gene-D5F92_RS03785;Name=D5F92_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03785;old_locus_tag=D5F92_03800 NZ_QYTJ01000020.1 Protein Homology CDS 46334 47026 . + 0 ID=cds-WP_001011647.1;Parent=gene-D5F92_RS03785;Dbxref=GenBank:WP_001011647.1;Name=WP_001011647.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001011649.1;locus_tag=D5F92_RS03785;product=amino acid ABC transporter permease;protein_id=WP_001011647.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 47019 47753 . + . ID=gene-D5F92_RS03790;Name=D5F92_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03790;old_locus_tag=D5F92_03805 NZ_QYTJ01000020.1 Protein Homology CDS 47019 47753 . + 0 ID=cds-WP_000230128.1;Parent=gene-D5F92_RS03790;Dbxref=GenBank:WP_000230128.1;Name=WP_000230128.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019805208.1;locus_tag=D5F92_RS03790;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000230128.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 48040 49734 . + . ID=gene-D5F92_RS03795;Name=D5F92_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03795;old_locus_tag=D5F92_03810 NZ_QYTJ01000020.1 Protein Homology CDS 48040 49734 . + 0 ID=cds-WP_001106852.1;Parent=gene-D5F92_RS03795;Dbxref=GenBank:WP_001106852.1;Name=WP_001106852.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106850.1;locus_tag=D5F92_RS03795;product=phospho-sugar mutase;protein_id=WP_001106852.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 49873 50727 . + . ID=gene-D5F92_RS03800;Name=D5F92_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03800;old_locus_tag=D5F92_03815 NZ_QYTJ01000020.1 Protein Homology CDS 49873 50727 . + 0 ID=cds-WP_000137498.1;Parent=gene-D5F92_RS03800;Dbxref=GenBank:WP_000137498.1;Name=WP_000137498.1;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137498.1;locus_tag=D5F92_RS03800;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_000137498.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 50724 51560 . + . ID=gene-D5F92_RS03805;Name=D5F92_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03805;old_locus_tag=D5F92_03820 NZ_QYTJ01000020.1 Protein Homology CDS 50724 51560 . + 0 ID=cds-WP_000634978.1;Parent=gene-D5F92_RS03805;Dbxref=GenBank:WP_000634978.1;Name=WP_000634978.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634980.1;locus_tag=D5F92_RS03805;product=NAD(P)H-hydrate dehydratase;protein_id=WP_000634978.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 51686 53026 . + . ID=gene-D5F92_RS03810;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=D5F92_RS03810;old_locus_tag=D5F92_03825 NZ_QYTJ01000020.1 Protein Homology CDS 51686 53026 . + 0 ID=cds-WP_016502612.1;Parent=gene-D5F92_RS03810;Dbxref=GenBank:WP_016502612.1;Name=WP_016502612.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001286947.1;locus_tag=D5F92_RS03810;product=exodeoxyribonuclease VII large subunit;protein_id=WP_016502612.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 53004 53219 . + . ID=gene-D5F92_RS03815;Name=D5F92_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03815;old_locus_tag=D5F92_03830 NZ_QYTJ01000020.1 Protein Homology CDS 53004 53219 . + 0 ID=cds-WP_001280898.1;Parent=gene-D5F92_RS03815;Dbxref=GenBank:WP_001280898.1;Name=WP_001280898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280900.1;locus_tag=D5F92_RS03815;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001280898.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 53219 54091 . + . ID=gene-D5F92_RS03820;Name=D5F92_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03820;old_locus_tag=D5F92_03835 NZ_QYTJ01000020.1 Protein Homology CDS 53219 54091 . + 0 ID=cds-WP_000256279.1;Parent=gene-D5F92_RS03820;Dbxref=GenBank:WP_000256279.1;Name=WP_000256279.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256278.1;locus_tag=D5F92_RS03820;product=polyprenyl synthetase family protein;protein_id=WP_000256279.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 54084 54911 . + . ID=gene-D5F92_RS03825;Name=D5F92_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03825;old_locus_tag=D5F92_03840 NZ_QYTJ01000020.1 Protein Homology CDS 54084 54911 . + 0 ID=cds-WP_001041037.1;Parent=gene-D5F92_RS03825;Dbxref=GenBank:WP_001041037.1;Name=WP_001041037.1;Ontology_term=GO:0032259,GO:0003723,GO:0008168;gbkey=CDS;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650752.1;locus_tag=D5F92_RS03825;product=TlyA family RNA methyltransferase;protein_id=WP_001041037.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 54898 55371 . + . ID=gene-D5F92_RS03830;Name=D5F92_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03830;old_locus_tag=D5F92_03845 NZ_QYTJ01000020.1 Protein Homology CDS 54898 55371 . + 0 ID=cds-WP_000747940.1;Parent=gene-D5F92_RS03830;Dbxref=GenBank:WP_000747940.1;Name=WP_000747940.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647076.1;locus_tag=D5F92_RS03830;product=arginine repressor;protein_id=WP_000747940.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 55383 57041 . + . ID=gene-D5F92_RS03835;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=D5F92_RS03835;old_locus_tag=D5F92_03850 NZ_QYTJ01000020.1 Protein Homology CDS 55383 57041 . + 0 ID=cds-WP_016480429.1;Parent=gene-D5F92_RS03835;Dbxref=GenBank:WP_016480429.1;Name=WP_016480429.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923612.1;locus_tag=D5F92_RS03835;product=DNA repair protein RecN;protein_id=WP_016480429.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 57159 57995 . + . ID=gene-D5F92_RS03840;Name=D5F92_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03840;old_locus_tag=D5F92_03855 NZ_QYTJ01000020.1 Protein Homology CDS 57159 57995 . + 0 ID=cds-WP_016480430.1;Parent=gene-D5F92_RS03840;Dbxref=GenBank:WP_016480430.1;Name=WP_016480430.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034838.1;locus_tag=D5F92_RS03840;product=DegV family protein;protein_id=WP_016480430.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 57988 58827 . + . ID=gene-D5F92_RS03845;Name=D5F92_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03845;old_locus_tag=D5F92_03860 NZ_QYTJ01000020.1 Protein Homology CDS 57988 58827 . + 0 ID=cds-WP_041165657.1;Parent=gene-D5F92_RS03845;Dbxref=GenBank:WP_041165657.1;Name=WP_041165657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035225.1;locus_tag=D5F92_RS03845;product=SGNH/GDSL hydrolase family protein;protein_id=WP_041165657.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 58802 59404 . + . ID=gene-D5F92_RS03850;Name=D5F92_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03850;old_locus_tag=D5F92_03865 NZ_QYTJ01000020.1 Protein Homology CDS 58802 59404 . + 0 ID=cds-WP_016480432.1;Parent=gene-D5F92_RS03850;Dbxref=GenBank:WP_016480432.1;Name=WP_016480432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647077.1;locus_tag=D5F92_RS03850;product=YpmS family protein;protein_id=WP_016480432.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 59507 59782 . + . ID=gene-D5F92_RS03855;Name=D5F92_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03855;old_locus_tag=D5F92_03870 NZ_QYTJ01000020.1 Protein Homology CDS 59507 59782 . + 0 ID=cds-WP_001284634.1;Parent=gene-D5F92_RS03855;Dbxref=GenBank:WP_001284634.1;Name=WP_001284634.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950996.1;locus_tag=D5F92_RS03855;product=HU family DNA-binding protein;protein_id=WP_001284634.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 59979 60176 . + . ID=gene-D5F92_RS03860;Name=D5F92_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03860;old_locus_tag=D5F92_03875 NZ_QYTJ01000020.1 Protein Homology CDS 59979 60176 . + 0 ID=cds-WP_001290370.1;Parent=gene-D5F92_RS03860;Dbxref=GenBank:WP_001290370.1;Name=WP_001290370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290369.1;locus_tag=D5F92_RS03860;product=hypothetical protein;protein_id=WP_001290370.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 60220 61152 . - . ID=gene-D5F92_RS03865;Name=D5F92_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03865;old_locus_tag=D5F92_03880 NZ_QYTJ01000020.1 Protein Homology CDS 60220 61152 . - 0 ID=cds-WP_000254063.1;Parent=gene-D5F92_RS03865;Dbxref=GenBank:WP_000254063.1;Name=WP_000254063.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254063.1;locus_tag=D5F92_RS03865;product=dihydroorotate oxidase;protein_id=WP_000254063.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 61340 62575 . - . ID=gene-D5F92_RS03870;Name=D5F92_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03870;old_locus_tag=D5F92_03885 NZ_QYTJ01000020.1 Protein Homology CDS 61340 62575 . - 0 ID=cds-WP_016502615.1;Parent=gene-D5F92_RS03870;Dbxref=GenBank:WP_016502615.1;Name=WP_016502615.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185395.1;locus_tag=D5F92_RS03870;product=aminoacyltransferase;protein_id=WP_016502615.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 62594 63805 . - . ID=gene-D5F92_RS03875;Name=D5F92_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03875;old_locus_tag=D5F92_03890 NZ_QYTJ01000020.1 Protein Homology CDS 62594 63805 . - 0 ID=cds-WP_000285514.1;Parent=gene-D5F92_RS03875;Dbxref=GenBank:WP_000285514.1;Name=WP_000285514.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285508.1;locus_tag=D5F92_RS03875;product=aminoacyltransferase;protein_id=WP_000285514.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 63818 65038 . - . ID=gene-D5F92_RS03880;Name=D5F92_RS03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03880;old_locus_tag=D5F92_03895;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 63818 65038 . - 0 ID=cds-D5F92_RS03880;Parent=gene-D5F92_RS03880;Note=internal stop;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854600.1;locus_tag=D5F92_RS03880;product=aminoacyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 65038 65850 . - . ID=gene-D5F92_RS03885;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=D5F92_RS03885;old_locus_tag=D5F92_03900 NZ_QYTJ01000020.1 Protein Homology CDS 65038 65850 . - 0 ID=cds-WP_016480435.1;Parent=gene-D5F92_RS03885;Dbxref=GenBank:WP_016480435.1;Name=WP_016480435.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200665.1;locus_tag=D5F92_RS03885;product=sugar-phosphatase;protein_id=WP_016480435.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 65921 67237 . - . ID=gene-D5F92_RS03890;Name=D5F92_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03890;old_locus_tag=D5F92_03905 NZ_QYTJ01000020.1 Protein Homology CDS 65921 67237 . - 0 ID=cds-WP_016502619.1;Parent=gene-D5F92_RS03890;Dbxref=GenBank:WP_016502619.1;Name=WP_016502619.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646365.1;locus_tag=D5F92_RS03890;product=HD domain-containing protein;protein_id=WP_016502619.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 67313 67699 . + . ID=gene-D5F92_RS03895;Name=D5F92_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03895;old_locus_tag=D5F92_03910 NZ_QYTJ01000020.1 Protein Homology CDS 67313 67699 . + 0 ID=cds-WP_001903189.1;Parent=gene-D5F92_RS03895;Dbxref=GenBank:WP_001903189.1;Name=WP_001903189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764119.1;locus_tag=D5F92_RS03895;product=DUF1934 domain-containing protein;protein_id=WP_001903189.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 68043 70727 . + . ID=gene-D5F92_RS03900;Name=D5F92_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03900;old_locus_tag=D5F92_03915 NZ_QYTJ01000020.1 Protein Homology CDS 68043 70727 . + 0 ID=cds-WP_000910750.1;Parent=gene-D5F92_RS03900;Dbxref=GenBank:WP_000910750.1;Name=WP_000910750.1;Ontology_term=GO:0006816,GO:0005388,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=P-type calcium transporter activity|0005388||IEA,ATP binding|0005524||IEA;go_process=calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771360.1;locus_tag=D5F92_RS03900;product=calcium-translocating P-type ATPase%2C PMCA-type;protein_id=WP_000910750.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 70772 71632 . - . ID=gene-D5F92_RS03905;Name=D5F92_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03905;old_locus_tag=D5F92_03920 NZ_QYTJ01000020.1 Protein Homology CDS 70772 71632 . - 0 ID=cds-WP_086163255.1;Parent=gene-D5F92_RS03905;Dbxref=GenBank:WP_086163255.1;Name=WP_086163255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163483.1;locus_tag=D5F92_RS03905;product=metallophosphoesterase;protein_id=WP_086163255.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 71784 73715 . + . ID=gene-D5F92_RS03910;Name=D5F92_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03910;old_locus_tag=D5F92_03925 NZ_QYTJ01000020.1 Protein Homology CDS 71784 73715 . + 0 ID=cds-WP_016502623.1;Parent=gene-D5F92_RS03910;Dbxref=GenBank:WP_016502623.1;Name=WP_016502623.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064640.1;locus_tag=D5F92_RS03910;product=fructose-bisphosphatase class III;protein_id=WP_016502623.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 73805 74930 . + . ID=gene-D5F92_RS03915;Name=queG;gbkey=Gene;gene=queG;gene_biotype=pseudogene;locus_tag=D5F92_RS03915;old_locus_tag=D5F92_03930;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 73805 74930 . + 0 ID=cds-D5F92_RS03915;Parent=gene-D5F92_RS03915;Note=frameshifted;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351638.1;locus_tag=D5F92_RS03915;product=tRNA epoxyqueuosine(34) reductase QueG;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 74999 76097 . + . ID=gene-D5F92_RS03920;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=D5F92_RS03920;old_locus_tag=D5F92_03935 NZ_QYTJ01000020.1 Protein Homology CDS 74999 75070 . + 0 ID=cds-WP_011324939.1;Parent=gene-D5F92_RS03920;Dbxref=GenBank:WP_011324939.1;Name=WP_011324939.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889043.1;locus_tag=D5F92_RS03920;product=peptide chain release factor 2;protein_id=WP_011324939.1;transl_table=11 NZ_QYTJ01000020.1 Protein Homology CDS 75072 76097 . + 0 ID=cds-WP_011324939.1;Parent=gene-D5F92_RS03920;Dbxref=GenBank:WP_011324939.1;Name=WP_011324939.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889043.1;locus_tag=D5F92_RS03920;product=peptide chain release factor 2;protein_id=WP_011324939.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 76116 76808 . + . ID=gene-D5F92_RS03925;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=D5F92_RS03925;old_locus_tag=D5F92_03940 NZ_QYTJ01000020.1 Protein Homology CDS 76116 76808 . + 0 ID=cds-WP_001173889.1;Parent=gene-D5F92_RS03925;Dbxref=GenBank:WP_001173889.1;Name=WP_001173889.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294955.1;locus_tag=D5F92_RS03925;product=cell division ATP-binding protein FtsE;protein_id=WP_001173889.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 76792 77721 . + . ID=gene-D5F92_RS03930;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=D5F92_RS03930;old_locus_tag=D5F92_03945 NZ_QYTJ01000020.1 Protein Homology CDS 76792 77721 . + 0 ID=cds-WP_000236202.1;Parent=gene-D5F92_RS03930;Dbxref=GenBank:WP_000236202.1;Name=WP_000236202.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768486.1;locus_tag=D5F92_RS03930;product=permease-like cell division protein FtsX;protein_id=WP_000236202.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 77774 78484 . - . ID=gene-D5F92_RS03935;Name=D5F92_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03935;old_locus_tag=D5F92_03950 NZ_QYTJ01000020.1 Protein Homology CDS 77774 78484 . - 0 ID=cds-WP_086163257.1;Parent=gene-D5F92_RS03935;Dbxref=GenBank:WP_086163257.1;Name=WP_086163257.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022568.1;locus_tag=D5F92_RS03935;product=alpha/beta hydrolase;protein_id=WP_086163257.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 78481 79116 . - . ID=gene-D5F92_RS03940;Name=D5F92_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03940;old_locus_tag=D5F92_03955 NZ_QYTJ01000020.1 Protein Homology CDS 78481 79116 . - 0 ID=cds-WP_016502626.1;Parent=gene-D5F92_RS03940;Dbxref=GenBank:WP_016502626.1;Name=WP_016502626.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708399.1;locus_tag=D5F92_RS03940;product=MBL fold metallo-hydrolase;protein_id=WP_016502626.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 79347 80111 . + . ID=gene-D5F92_RS03945;Name=D5F92_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03945;old_locus_tag=D5F92_03960 NZ_QYTJ01000020.1 Protein Homology CDS 79347 80111 . + 0 ID=cds-WP_000048144.1;Parent=gene-D5F92_RS03945;Dbxref=GenBank:WP_000048144.1;Name=WP_000048144.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048144.1;locus_tag=D5F92_RS03945;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_000048144.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 80261 82726 . + . ID=gene-D5F92_RS03950;Name=D5F92_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03950;old_locus_tag=D5F92_03965 NZ_QYTJ01000020.1 Protein Homology CDS 80261 82726 . + 0 ID=cds-WP_307777617.1;Parent=gene-D5F92_RS03950;Dbxref=GenBank:WP_307777617.1;Name=WP_307777617.1;Ontology_term=GO:0006139,GO:0006260,GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA,DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058430.1;locus_tag=D5F92_RS03950;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=WP_307777617.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 82812 84005 . + . ID=gene-D5F92_RS03955;Name=D5F92_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03955;old_locus_tag=D5F92_03970 NZ_QYTJ01000020.1 Protein Homology CDS 82812 84005 . + 0 ID=cds-WP_000221826.1;Parent=gene-D5F92_RS03955;Dbxref=GenBank:WP_000221826.1;Name=WP_000221826.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221826.1;locus_tag=D5F92_RS03955;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000221826.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 84026 85372 . + . ID=gene-D5F92_RS03960;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=D5F92_RS03960;old_locus_tag=D5F92_03975 NZ_QYTJ01000020.1 Protein Homology CDS 84026 85372 . + 0 ID=cds-WP_000038473.1;Parent=gene-D5F92_RS03960;Dbxref=GenBank:WP_000038473.1;Name=WP_000038473.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038477.1;locus_tag=D5F92_RS03960;product=asparagine--tRNA ligase;protein_id=WP_000038473.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 85412 85969 . - . ID=gene-D5F92_RS03965;Name=D5F92_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03965;old_locus_tag=D5F92_03980 NZ_QYTJ01000020.1 Protein Homology CDS 85412 85969 . - 0 ID=cds-WP_016502630.1;Parent=gene-D5F92_RS03965;Dbxref=GenBank:WP_016502630.1;Name=WP_016502630.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502630.1;locus_tag=D5F92_RS03965;product=ECF transporter S component;protein_id=WP_016502630.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 85966 86949 . - . ID=gene-D5F92_RS03970;Name=D5F92_RS03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS03970;old_locus_tag=D5F92_03985;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 85966 86949 . - 0 ID=cds-D5F92_RS03970;Parent=gene-D5F92_RS03970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031103.1;locus_tag=D5F92_RS03970;product=nucleoside hydrolase;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 cmsearch riboswitch 87093 87137 . - . ID=id-NZ_QYTJ01000020.1:87093..87137;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000020.1 RefSeq gene 87195 87608 . - . ID=gene-D5F92_RS03980;Name=D5F92_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03980;old_locus_tag=D5F92_03995 NZ_QYTJ01000020.1 Protein Homology CDS 87195 87608 . - 0 ID=cds-WP_000965179.1;Parent=gene-D5F92_RS03980;Dbxref=GenBank:WP_000965179.1;Name=WP_000965179.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771875.1;locus_tag=D5F92_RS03980;product=OsmC family protein;protein_id=WP_000965179.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 87762 88652 . + . ID=gene-D5F92_RS03985;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=D5F92_RS03985;old_locus_tag=D5F92_04000 NZ_QYTJ01000020.1 Protein Homology CDS 87762 88652 . + 0 ID=cds-WP_086163261.1;Parent=gene-D5F92_RS03985;Dbxref=GenBank:WP_086163261.1;Name=WP_086163261.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278849.1;locus_tag=D5F92_RS03985;product=RNase adapter RapZ;protein_id=WP_086163261.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 88649 89623 . + . ID=gene-D5F92_RS03990;Name=D5F92_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS03990;old_locus_tag=D5F92_04005 NZ_QYTJ01000020.1 Protein Homology CDS 88649 89623 . + 0 ID=cds-WP_016502634.1;Parent=gene-D5F92_RS03990;Dbxref=GenBank:WP_016502634.1;Name=WP_016502634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231103.1;locus_tag=D5F92_RS03990;product=YvcK family protein;protein_id=WP_016502634.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 89620 90531 . + . ID=gene-D5F92_RS03995;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=D5F92_RS03995;old_locus_tag=D5F92_04010 NZ_QYTJ01000020.1 Protein Homology CDS 89620 90531 . + 0 ID=cds-WP_000011319.1;Parent=gene-D5F92_RS03995;Dbxref=GenBank:WP_000011319.1;Name=WP_000011319.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011317.1;locus_tag=D5F92_RS03995;product=DNA-binding protein WhiA;protein_id=WP_000011319.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 90589 92004 . - . ID=gene-D5F92_RS04000;Name=D5F92_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04000;old_locus_tag=D5F92_04015 NZ_QYTJ01000020.1 Protein Homology CDS 90589 92004 . - 0 ID=cds-WP_124785432.1;Parent=gene-D5F92_RS04000;Dbxref=GenBank:WP_124785432.1;Name=WP_124785432.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011017563.1;locus_tag=D5F92_RS04000;product=recombinase family protein;protein_id=WP_124785432.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 92124 92507 . - . ID=gene-D5F92_RS04005;Name=D5F92_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04005;old_locus_tag=D5F92_04020 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 92124 92507 . - 0 ID=cds-WP_257645471.1;Parent=gene-D5F92_RS04005;Dbxref=GenBank:WP_257645471.1;Name=WP_257645471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS04005;product=hypothetical protein;protein_id=WP_257645471.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 92500 92949 . - . ID=gene-D5F92_RS04010;Name=D5F92_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04010;old_locus_tag=D5F92_04025 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 92500 92949 . - 0 ID=cds-WP_124749019.1;Parent=gene-D5F92_RS04010;Dbxref=GenBank:WP_124749019.1;Name=WP_124749019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS04010;product=hypothetical protein;protein_id=WP_124749019.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 93137 93934 . - . ID=gene-D5F92_RS04020;Name=D5F92_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04020;old_locus_tag=D5F92_04035 NZ_QYTJ01000020.1 Protein Homology CDS 93137 93934 . - 0 ID=cds-WP_124758789.1;Parent=gene-D5F92_RS04020;Dbxref=GenBank:WP_124758789.1;Name=WP_124758789.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646498.1;locus_tag=D5F92_RS04020;product=helix-turn-helix domain-containing protein;protein_id=WP_124758789.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 94293 94451 . + . ID=gene-D5F92_RS04025;Name=D5F92_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04025;old_locus_tag=D5F92_04040 NZ_QYTJ01000020.1 Protein Homology CDS 94293 94451 . + 0 ID=cds-WP_001104149.1;Parent=gene-D5F92_RS04025;Dbxref=GenBank:WP_001104149.1;Name=WP_001104149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650606.1;locus_tag=D5F92_RS04025;product=hypothetical protein;protein_id=WP_001104149.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 94484 94672 . + . ID=gene-D5F92_RS04030;Name=D5F92_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04030;old_locus_tag=D5F92_04045 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 94484 94672 . + 0 ID=cds-WP_079218633.1;Parent=gene-D5F92_RS04030;Dbxref=GenBank:WP_079218633.1;Name=WP_079218633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS04030;product=hypothetical protein;protein_id=WP_079218633.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 94674 95516 . - . ID=gene-D5F92_RS04035;Name=D5F92_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04035;old_locus_tag=D5F92_04050 NZ_QYTJ01000020.1 Protein Homology CDS 94674 95516 . - 0 ID=cds-WP_124758788.1;Parent=gene-D5F92_RS04035;Dbxref=GenBank:WP_124758788.1;Name=WP_124758788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025695.7;locus_tag=D5F92_RS04035;product=Abi-alpha family protein;protein_id=WP_124758788.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 95570 95761 . + . ID=gene-D5F92_RS04040;Name=D5F92_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04040;old_locus_tag=D5F92_04055 NZ_QYTJ01000020.1 Protein Homology CDS 95570 95761 . + 0 ID=cds-WP_001183891.1;Parent=gene-D5F92_RS04040;Dbxref=GenBank:WP_001183891.1;Name=WP_001183891.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183892.1;locus_tag=D5F92_RS04040;product=helix-turn-helix transcriptional regulator;protein_id=WP_001183891.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 95829 96575 . + . ID=gene-D5F92_RS04045;Name=D5F92_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04045;old_locus_tag=D5F92_04060 NZ_QYTJ01000020.1 Protein Homology CDS 95829 96575 . + 0 ID=cds-WP_124758787.1;Parent=gene-D5F92_RS04045;Dbxref=GenBank:WP_124758787.1;Name=WP_124758787.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480565.1;locus_tag=D5F92_RS04045;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_124758787.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 96637 96777 . + . ID=gene-D5F92_RS11295;Name=D5F92_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11295 NZ_QYTJ01000020.1 Protein Homology CDS 96637 96777 . + 0 ID=cds-WP_017768465.1;Parent=gene-D5F92_RS11295;Dbxref=GenBank:WP_017768465.1;Name=WP_017768465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768465.1;locus_tag=D5F92_RS11295;product=BOW99_gp33 family protein;protein_id=WP_017768465.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 96779 97003 . + . ID=gene-D5F92_RS04050;Name=D5F92_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04050;old_locus_tag=D5F92_04065 NZ_QYTJ01000020.1 Protein Homology CDS 96779 97003 . + 0 ID=cds-WP_124758786.1;Parent=gene-D5F92_RS04050;Dbxref=GenBank:WP_124758786.1;Name=WP_124758786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431163.1;locus_tag=D5F92_RS04050;product=hypothetical protein;protein_id=WP_124758786.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 97015 97176 . + . ID=gene-D5F92_RS11475;Name=D5F92_RS11475;end_range=97176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11475;partial=true;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 97015 97176 . + 0 ID=cds-D5F92_RS11475;Parent=gene-D5F92_RS11475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=97176,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080841.1;locus_tag=D5F92_RS11475;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 97427 97807 . - . ID=gene-D5F92_RS04060;Name=D5F92_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04060;old_locus_tag=D5F92_04075 NZ_QYTJ01000020.1 Protein Homology CDS 97427 97807 . - 0 ID=cds-WP_124758784.1;Parent=gene-D5F92_RS04060;Dbxref=GenBank:WP_124758784.1;Name=WP_124758784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568479.1;locus_tag=D5F92_RS04060;product=hypothetical protein;protein_id=WP_124758784.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 97988 98854 . + . ID=gene-D5F92_RS04065;Name=D5F92_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04065;old_locus_tag=D5F92_04080 NZ_QYTJ01000020.1 Protein Homology CDS 97988 98854 . + 0 ID=cds-WP_124758783.1;Parent=gene-D5F92_RS04065;Dbxref=GenBank:WP_124758783.1;Name=WP_124758783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643648.1;locus_tag=D5F92_RS04065;product=phage replisome organizer N-terminal domain-containing protein;protein_id=WP_124758783.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 98865 99719 . + . ID=gene-D5F92_RS04070;Name=D5F92_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04070;old_locus_tag=D5F92_04085 NZ_QYTJ01000020.1 Protein Homology CDS 98865 99719 . + 0 ID=cds-WP_124785434.1;Parent=gene-D5F92_RS04070;Dbxref=GenBank:WP_124785434.1;Name=WP_124785434.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739453.1;locus_tag=D5F92_RS04070;product=ATP-binding protein;protein_id=WP_124785434.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 99855 100130 . + . ID=gene-D5F92_RS04075;Name=D5F92_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04075;old_locus_tag=D5F92_04090 NZ_QYTJ01000020.1 Protein Homology CDS 99855 100130 . + 0 ID=cds-WP_124785436.1;Parent=gene-D5F92_RS04075;Dbxref=GenBank:WP_124785436.1;Name=WP_124785436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643874.1;locus_tag=D5F92_RS04075;product=hypothetical protein;protein_id=WP_124785436.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 100117 100371 . + . ID=gene-D5F92_RS04080;Name=D5F92_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04080;old_locus_tag=D5F92_04095 NZ_QYTJ01000020.1 Protein Homology CDS 100117 100371 . + 0 ID=cds-WP_016480522.1;Parent=gene-D5F92_RS04080;Dbxref=GenBank:WP_016480522.1;Name=WP_016480522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088460.1;locus_tag=D5F92_RS04080;product=hypothetical protein;protein_id=WP_016480522.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 100374 100535 . + . ID=gene-D5F92_RS04085;Name=D5F92_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04085;old_locus_tag=D5F92_04100 NZ_QYTJ01000020.1 Protein Homology CDS 100374 100535 . + 0 ID=cds-WP_079399046.1;Parent=gene-D5F92_RS04085;Dbxref=GenBank:WP_079399046.1;Name=WP_079399046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288191.1;locus_tag=D5F92_RS04085;product=hypothetical protein;protein_id=WP_079399046.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 100536 101018 . + . ID=gene-D5F92_RS04090;Name=D5F92_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04090;old_locus_tag=D5F92_04105 NZ_QYTJ01000020.1 Protein Homology CDS 100536 101018 . + 0 ID=cds-WP_124785438.1;Parent=gene-D5F92_RS04090;Dbxref=GenBank:WP_124785438.1;Name=WP_124785438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323862.1;locus_tag=D5F92_RS04090;product=siphovirus Gp157 family protein;protein_id=WP_124785438.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 101019 101693 . + . ID=gene-D5F92_RS04095;Name=D5F92_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04095;old_locus_tag=D5F92_04110 NZ_QYTJ01000020.1 Protein Homology CDS 101019 101693 . + 0 ID=cds-WP_016480525.1;Parent=gene-D5F92_RS04095;Dbxref=GenBank:WP_016480525.1;Name=WP_016480525.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054760.1;locus_tag=D5F92_RS04095;product=ERF family protein;protein_id=WP_016480525.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 101686 102102 . + . ID=gene-D5F92_RS04100;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=D5F92_RS04100;old_locus_tag=D5F92_04115 NZ_QYTJ01000020.1 Protein Homology CDS 101686 102102 . + 0 ID=cds-WP_124773223.1;Parent=gene-D5F92_RS04100;Dbxref=GenBank:WP_124773223.1;Name=WP_124773223.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019778239.1;locus_tag=D5F92_RS04100;product=single-stranded DNA-binding protein;protein_id=WP_124773223.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 102105 102308 . + . ID=gene-D5F92_RS04105;Name=D5F92_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04105;old_locus_tag=D5F92_04120 NZ_QYTJ01000020.1 Protein Homology CDS 102105 102308 . + 0 ID=cds-WP_124758776.1;Parent=gene-D5F92_RS04105;Dbxref=GenBank:WP_124758776.1;Name=WP_124758776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165746.1;locus_tag=D5F92_RS04105;product=hypothetical protein;protein_id=WP_124758776.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 102298 102774 . + . ID=gene-D5F92_RS04110;Name=D5F92_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04110;old_locus_tag=D5F92_04125 NZ_QYTJ01000020.1 Protein Homology CDS 102298 102774 . + 0 ID=cds-WP_124773191.1;Parent=gene-D5F92_RS04110;Dbxref=GenBank:WP_124773191.1;Name=WP_124773191.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768474.1;locus_tag=D5F92_RS04110;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_124773191.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 102764 103111 . + . ID=gene-D5F92_RS04115;Name=D5F92_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04115;old_locus_tag=D5F92_04130 NZ_QYTJ01000020.1 Protein Homology CDS 102764 103111 . + 0 ID=cds-WP_124759144.1;Parent=gene-D5F92_RS04115;Dbxref=GenBank:WP_124759144.1;Name=WP_124759144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129025.1;locus_tag=D5F92_RS04115;product=hypothetical protein;protein_id=WP_124759144.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 103123 103395 . + . ID=gene-D5F92_RS04120;Name=D5F92_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04120;old_locus_tag=D5F92_04135 NZ_QYTJ01000020.1 Protein Homology CDS 103123 103395 . + 0 ID=cds-WP_124785440.1;Parent=gene-D5F92_RS04120;Dbxref=GenBank:WP_124785440.1;Name=WP_124785440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763911.1;locus_tag=D5F92_RS04120;product=nucleotide modification associated domain-containing protein;protein_id=WP_124785440.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 103395 103757 . + . ID=gene-D5F92_RS04125;Name=D5F92_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04125;old_locus_tag=D5F92_04140 NZ_QYTJ01000020.1 Protein Homology CDS 103395 103757 . + 0 ID=cds-WP_124785442.1;Parent=gene-D5F92_RS04125;Dbxref=GenBank:WP_124785442.1;Name=WP_124785442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480529.1;locus_tag=D5F92_RS04125;product=YopX family protein;protein_id=WP_124785442.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 103757 103921 . + . ID=gene-D5F92_RS11310;Name=D5F92_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11310 NZ_QYTJ01000020.1 Protein Homology CDS 103757 103921 . + 0 ID=cds-WP_000717789.1;Parent=gene-D5F92_RS11310;Dbxref=GenBank:WP_000717789.1;Name=WP_000717789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717789.1;locus_tag=D5F92_RS11310;product=hypothetical protein;protein_id=WP_000717789.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 103918 104124 . + . ID=gene-D5F92_RS04130;Name=D5F92_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04130;old_locus_tag=D5F92_04145 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 103918 104124 . + 0 ID=cds-WP_121205262.1;Parent=gene-D5F92_RS04130;Dbxref=GenBank:WP_121205262.1;Name=WP_121205262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS04130;product=hypothetical protein;protein_id=WP_121205262.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 104127 104351 . + . ID=gene-D5F92_RS04135;Name=D5F92_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04135;old_locus_tag=D5F92_04150 NZ_QYTJ01000020.1 GeneMarkS-2+ CDS 104127 104351 . + 0 ID=cds-WP_124785444.1;Parent=gene-D5F92_RS04135;Dbxref=GenBank:WP_124785444.1;Name=WP_124785444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS04135;product=hypothetical protein;protein_id=WP_124785444.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 104354 104896 . + . ID=gene-D5F92_RS04140;Name=D5F92_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04140;old_locus_tag=D5F92_04155 NZ_QYTJ01000020.1 Protein Homology CDS 104354 104896 . + 0 ID=cds-WP_124759148.1;Parent=gene-D5F92_RS04140;Dbxref=GenBank:WP_124759148.1;Name=WP_124759148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089788.1;locus_tag=D5F92_RS04140;product=hypothetical protein;protein_id=WP_124759148.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 105025 105438 . + . ID=gene-D5F92_RS04145;Name=D5F92_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04145;old_locus_tag=D5F92_04160 NZ_QYTJ01000020.1 Protein Homology CDS 105025 105438 . + 0 ID=cds-WP_124759416.1;Parent=gene-D5F92_RS04145;Dbxref=GenBank:WP_124759416.1;Name=WP_124759416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041038.1;locus_tag=D5F92_RS04145;product=transcriptional regulator;protein_id=WP_124759416.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 105617 106378 . + . ID=gene-D5F92_RS04150;Name=D5F92_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04150;old_locus_tag=D5F92_04165 NZ_QYTJ01000020.1 Protein Homology CDS 105617 106378 . + 0 ID=cds-WP_180383581.1;Parent=gene-D5F92_RS04150;Dbxref=GenBank:WP_180383581.1;Name=WP_180383581.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.6;locus_tag=D5F92_RS04150;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_180383581.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 106403 106483 . + . ID=gene-D5F92_RS04155;Name=D5F92_RS04155;end_range=106483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS04155;old_locus_tag=D5F92_04170;partial=true;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 106403 106483 . + 0 ID=cds-D5F92_RS04155;Parent=gene-D5F92_RS04155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=106483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863702.1;locus_tag=D5F92_RS04155;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 106478 107062 . + . ID=gene-D5F92_RS11390;Name=D5F92_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11390 NZ_QYTJ01000020.1 Protein Homology CDS 106478 107062 . + 0 ID=cds-WP_260424728.1;Parent=gene-D5F92_RS11390;Dbxref=GenBank:WP_260424728.1;Name=WP_260424728.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF013691.6;locus_tag=D5F92_RS11390;product=GIY-YIG nuclease family protein;protein_id=WP_260424728.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 107038 107454 . + . ID=gene-D5F92_RS04160;Name=D5F92_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04160;old_locus_tag=D5F92_04175 NZ_QYTJ01000020.1 Protein Homology CDS 107038 107454 . + 0 ID=cds-WP_086163563.1;Parent=gene-D5F92_RS04160;Dbxref=GenBank:WP_086163563.1;Name=WP_086163563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006907986.1;locus_tag=D5F92_RS04160;product=hypothetical protein;protein_id=WP_086163563.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 107444 108721 . + . ID=gene-D5F92_RS04165;Name=D5F92_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04165;old_locus_tag=D5F92_04180 NZ_QYTJ01000020.1 Protein Homology CDS 107444 108721 . + 0 ID=cds-WP_086163564.1;Parent=gene-D5F92_RS04165;Dbxref=GenBank:WP_086163564.1;Name=WP_086163564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054879.1;locus_tag=D5F92_RS04165;product=PBSX family phage terminase large subunit;protein_id=WP_086163564.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 108736 110268 . + . ID=gene-D5F92_RS04170;Name=D5F92_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04170;old_locus_tag=D5F92_04185 NZ_QYTJ01000020.1 Protein Homology CDS 108736 110268 . + 0 ID=cds-WP_124785446.1;Parent=gene-D5F92_RS04170;Dbxref=GenBank:WP_124785446.1;Name=WP_124785446.1;Ontology_term=GO:0051027,GO:0005198,GO:0046798;gbkey=CDS;go_component=viral portal complex|0046798||IEA;go_function=structural molecule activity|0005198||IEA;go_process=DNA transport|0051027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560651.1;locus_tag=D5F92_RS04170;product=phage portal protein;protein_id=WP_124785446.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 110228 111677 . + . ID=gene-D5F92_RS04175;Name=D5F92_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS04175;old_locus_tag=D5F92_04190;pseudo=true NZ_QYTJ01000020.1 Protein Homology CDS 110228 111677 . + 0 ID=cds-D5F92_RS04175;Parent=gene-D5F92_RS04175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054877.1;locus_tag=D5F92_RS04175;product=CdiA C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 111705 111893 . + . ID=gene-D5F92_RS04180;Name=D5F92_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04180;old_locus_tag=D5F92_04195 NZ_QYTJ01000020.1 Protein Homology CDS 111705 111893 . + 0 ID=cds-WP_025194522.1;Parent=gene-D5F92_RS04180;Dbxref=GenBank:WP_025194522.1;Name=WP_025194522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054876.1;locus_tag=D5F92_RS04180;product=hypothetical protein;protein_id=WP_025194522.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 111896 112162 . + . ID=gene-D5F92_RS04185;Name=D5F92_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04185;old_locus_tag=D5F92_04200 NZ_QYTJ01000020.1 Protein Homology CDS 111896 112162 . + 0 ID=cds-WP_086163566.1;Parent=gene-D5F92_RS04185;Dbxref=GenBank:WP_086163566.1;Name=WP_086163566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054745.1;locus_tag=D5F92_RS04185;product=hypothetical protein;protein_id=WP_086163566.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 112318 112887 . + . ID=gene-D5F92_RS04190;Name=D5F92_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04190;old_locus_tag=D5F92_04205 NZ_QYTJ01000020.1 Protein Homology CDS 112318 112887 . + 0 ID=cds-WP_043052439.1;Parent=gene-D5F92_RS04190;Dbxref=GenBank:WP_043052439.1;Name=WP_043052439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797011.1;locus_tag=D5F92_RS04190;product=DUF4355 domain-containing protein;protein_id=WP_043052439.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 112900 113787 . + . ID=gene-D5F92_RS04195;Name=D5F92_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04195;old_locus_tag=D5F92_04210 NZ_QYTJ01000020.1 Protein Homology CDS 112900 113787 . + 0 ID=cds-WP_124759407.1;Parent=gene-D5F92_RS04195;Dbxref=GenBank:WP_124759407.1;Name=WP_124759407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988771.1;locus_tag=D5F92_RS04195;product=phage major capsid protein;protein_id=WP_124759407.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 113799 114155 . + . ID=gene-D5F92_RS04200;Name=D5F92_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04200;old_locus_tag=D5F92_04215 NZ_QYTJ01000020.1 Protein Homology CDS 113799 114155 . + 0 ID=cds-WP_002988776.1;Parent=gene-D5F92_RS04200;Dbxref=GenBank:WP_002988776.1;Name=WP_002988776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988776.1;locus_tag=D5F92_RS04200;product=phage head-tail connector protein;protein_id=WP_002988776.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 114166 114444 . + . ID=gene-D5F92_RS04205;Name=D5F92_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04205;old_locus_tag=D5F92_04220 NZ_QYTJ01000020.1 Protein Homology CDS 114166 114444 . + 0 ID=cds-WP_086163568.1;Parent=gene-D5F92_RS04205;Dbxref=GenBank:WP_086163568.1;Name=WP_086163568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054872.1;locus_tag=D5F92_RS04205;product=hypothetical protein;protein_id=WP_086163568.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 114441 114785 . + . ID=gene-D5F92_RS04210;Name=D5F92_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04210;old_locus_tag=D5F92_04225 NZ_QYTJ01000020.1 Protein Homology CDS 114441 114785 . + 0 ID=cds-WP_086163569.1;Parent=gene-D5F92_RS04210;Dbxref=GenBank:WP_086163569.1;Name=WP_086163569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053327.1;locus_tag=D5F92_RS04210;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_086163569.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 114789 115148 . + . ID=gene-D5F92_RS04215;Name=D5F92_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04215;old_locus_tag=D5F92_04230 NZ_QYTJ01000020.1 Protein Homology CDS 114789 115148 . + 0 ID=cds-WP_000386634.1;Parent=gene-D5F92_RS04215;Dbxref=GenBank:WP_000386634.1;Name=WP_000386634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640604.1;locus_tag=D5F92_RS04215;product=hypothetical protein;protein_id=WP_000386634.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 115160 115792 . + . ID=gene-D5F92_RS04220;Name=D5F92_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04220;old_locus_tag=D5F92_04235 NZ_QYTJ01000020.1 Protein Homology CDS 115160 115792 . + 0 ID=cds-WP_086163570.1;Parent=gene-D5F92_RS04220;Dbxref=GenBank:WP_086163570.1;Name=WP_086163570.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450517.1;locus_tag=D5F92_RS04220;product=phage major tail protein%2C TP901-1 family;protein_id=WP_086163570.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 115841 116296 . + . ID=gene-D5F92_RS04225;Name=D5F92_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04225;old_locus_tag=D5F92_04240 NZ_QYTJ01000020.1 Protein Homology CDS 115841 116296 . + 0 ID=cds-WP_086163571.1;Parent=gene-D5F92_RS04225;Dbxref=GenBank:WP_086163571.1;Name=WP_086163571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011054868.1;locus_tag=D5F92_RS04225;product=tail assembly chaperone;protein_id=WP_086163571.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 116371 116601 . + . ID=gene-D5F92_RS04230;Name=D5F92_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04230;old_locus_tag=D5F92_04245 NZ_QYTJ01000020.1 Protein Homology CDS 116371 116601 . + 0 ID=cds-WP_000398752.1;Parent=gene-D5F92_RS04230;Dbxref=GenBank:WP_000398752.1;Name=WP_000398752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398752.1;locus_tag=D5F92_RS04230;product=hypothetical protein;protein_id=WP_000398752.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 116620 120846 . + . ID=gene-D5F92_RS04235;Name=D5F92_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04235;old_locus_tag=D5F92_04250 NZ_QYTJ01000020.1 Protein Homology CDS 116620 120846 . + 0 ID=cds-WP_086163572.1;Parent=gene-D5F92_RS04235;Dbxref=GenBank:WP_086163572.1;Name=WP_086163572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646851.1;locus_tag=D5F92_RS04235;product=tape measure protein;protein_id=WP_086163572.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 120859 121701 . + . ID=gene-D5F92_RS04240;Name=D5F92_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04240;old_locus_tag=D5F92_04255 NZ_QYTJ01000020.1 Protein Homology CDS 120859 121701 . + 0 ID=cds-WP_000365120.1;Parent=gene-D5F92_RS04240;Dbxref=GenBank:WP_000365120.1;Name=WP_000365120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365120.1;locus_tag=D5F92_RS04240;product=phage tail domain-containing protein;protein_id=WP_000365120.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 121714 125541 . + . ID=gene-D5F92_RS04245;Name=D5F92_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04245;old_locus_tag=D5F92_04260 NZ_QYTJ01000020.1 Protein Homology CDS 121714 125541 . + 0 ID=cds-WP_124759410.1;Parent=gene-D5F92_RS04245;Dbxref=GenBank:WP_124759410.1;Name=WP_124759410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206522.1;locus_tag=D5F92_RS04245;product=phage tail protein;protein_id=WP_124759410.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 125550 125702 . + . ID=gene-D5F92_RS11315;Name=D5F92_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11315 NZ_QYTJ01000020.1 Protein Homology CDS 125550 125702 . + 0 ID=cds-WP_000391486.1;Parent=gene-D5F92_RS11315;Dbxref=GenBank:WP_000391486.1;Name=WP_000391486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391485.1;locus_tag=D5F92_RS11315;product=hypothetical protein;protein_id=WP_000391486.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 125713 126129 . + . ID=gene-D5F92_RS04250;Name=D5F92_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04250;old_locus_tag=D5F92_04265 NZ_QYTJ01000020.1 Protein Homology CDS 125713 126129 . + 0 ID=cds-WP_124759411.1;Parent=gene-D5F92_RS04250;Dbxref=GenBank:WP_124759411.1;Name=WP_124759411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873936.1;locus_tag=D5F92_RS04250;product=DUF1366 domain-containing protein;protein_id=WP_124759411.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 126192 126350 . + . ID=gene-D5F92_RS11320;Name=D5F92_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11320 NZ_QYTJ01000020.1 Protein Homology CDS 126192 126350 . + 0 ID=cds-WP_180383654.1;Parent=gene-D5F92_RS11320;Dbxref=GenBank:WP_180383654.1;Name=WP_180383654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222555.1;locus_tag=D5F92_RS11320;product=hypothetical protein;protein_id=WP_180383654.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 126361 126666 . + . ID=gene-D5F92_RS04255;Name=D5F92_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04255;old_locus_tag=D5F92_04270 NZ_QYTJ01000020.1 Protein Homology CDS 126361 126666 . + 0 ID=cds-WP_124758723.1;Parent=gene-D5F92_RS04255;Dbxref=GenBank:WP_124758723.1;Name=WP_124758723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215496.1;locus_tag=D5F92_RS04255;product=hypothetical protein;protein_id=WP_124758723.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 126663 126998 . + . ID=gene-D5F92_RS04260;Name=D5F92_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04260;old_locus_tag=D5F92_04275 NZ_QYTJ01000020.1 Protein Homology CDS 126663 126998 . + 0 ID=cds-WP_124758722.1;Parent=gene-D5F92_RS04260;Dbxref=GenBank:WP_124758722.1;Name=WP_124758722.1;Ontology_term=GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001959.1;locus_tag=D5F92_RS04260;product=phage holin;protein_id=WP_124758722.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 127000 128214 . + . ID=gene-D5F92_RS04265;Name=D5F92_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04265;old_locus_tag=D5F92_04280 NZ_QYTJ01000020.1 Protein Homology CDS 127000 128214 . + 0 ID=cds-WP_124749031.1;Parent=gene-D5F92_RS04265;Dbxref=GenBank:WP_124749031.1;Name=WP_124749031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983477.1;locus_tag=D5F92_RS04265;product=peptidoglycan amidohydrolase family protein;protein_id=WP_124749031.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 128576 129088 . + . ID=gene-D5F92_RS04270;Name=D5F92_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04270;old_locus_tag=D5F92_04285 NZ_QYTJ01000020.1 Protein Homology CDS 128576 129088 . + 0 ID=cds-WP_000634506.1;Parent=gene-D5F92_RS04270;Dbxref=GenBank:WP_000634506.1;Name=WP_000634506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634506.1;locus_tag=D5F92_RS04270;product=PBECR4 domain-containing protein;protein_id=WP_000634506.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 129247 129447 . + . ID=gene-D5F92_RS04275;Name=D5F92_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04275;old_locus_tag=D5F92_04290 NZ_QYTJ01000020.1 Protein Homology CDS 129247 129447 . + 0 ID=cds-WP_016480478.1;Parent=gene-D5F92_RS04275;Dbxref=GenBank:WP_016480478.1;Name=WP_016480478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076713.1;locus_tag=D5F92_RS04275;product=CsbD family protein;protein_id=WP_016480478.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 129566 129772 . + . ID=gene-D5F92_RS04280;Name=D5F92_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04280;old_locus_tag=D5F92_04295 NZ_QYTJ01000020.1 Protein Homology CDS 129566 129772 . + 0 ID=cds-WP_016480484.1;Parent=gene-D5F92_RS04280;Dbxref=GenBank:WP_016480484.1;Name=WP_016480484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480484.1;locus_tag=D5F92_RS04280;product=competence regulator inhibitor paratox;protein_id=WP_016480484.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 129815 131233 . + . ID=gene-D5F92_RS04285;Name=D5F92_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04285;old_locus_tag=D5F92_04300 NZ_QYTJ01000020.1 Protein Homology CDS 129815 131233 . + 0 ID=cds-WP_124749158.1;Parent=gene-D5F92_RS04285;Dbxref=GenBank:WP_124749158.1;Name=WP_124749158.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011017593.1;locus_tag=D5F92_RS04285;product=C69 family dipeptidase;protein_id=WP_124749158.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 131375 132901 . + . ID=gene-D5F92_RS04290;Name=D5F92_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04290;old_locus_tag=D5F92_04305 NZ_QYTJ01000020.1 Protein Homology CDS 131375 132901 . + 0 ID=cds-WP_001227401.1;Parent=gene-D5F92_RS04290;Dbxref=GenBank:WP_001227401.1;Name=WP_001227401.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285234.1;locus_tag=D5F92_RS04290;product=zinc ABC transporter substrate-binding protein AdcA;protein_id=WP_001227401.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 133014 133274 . - . ID=gene-D5F92_RS04295;Name=D5F92_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04295;old_locus_tag=D5F92_04310 NZ_QYTJ01000020.1 Protein Homology CDS 133014 133274 . - 0 ID=cds-WP_000710757.1;Parent=gene-D5F92_RS04295;Dbxref=GenBank:WP_000710757.1;Name=WP_000710757.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370011.1;locus_tag=D5F92_RS04295;product=type B 50S ribosomal protein L31;protein_id=WP_000710757.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 133383 134318 . - . ID=gene-D5F92_RS04300;Name=D5F92_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04300;old_locus_tag=D5F92_04315 NZ_QYTJ01000020.1 Protein Homology CDS 133383 134318 . - 0 ID=cds-WP_016502636.1;Parent=gene-D5F92_RS04300;Dbxref=GenBank:WP_016502636.1;Name=WP_016502636.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583237.1;locus_tag=D5F92_RS04300;product=DHH family phosphoesterase;protein_id=WP_016502636.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 134584 135606 . + . ID=gene-D5F92_RS04305;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=D5F92_RS04305;old_locus_tag=D5F92_04320 NZ_QYTJ01000020.1 Protein Homology CDS 134584 135606 . + 0 ID=cds-WP_016502637.1;Parent=gene-D5F92_RS04305;Dbxref=GenBank:WP_016502637.1;Name=WP_016502637.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502637.1;locus_tag=D5F92_RS04305;product=adenosine deaminase;protein_id=WP_016502637.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 135665 136108 . + . ID=gene-D5F92_RS04310;Name=D5F92_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04310;old_locus_tag=D5F92_04325 NZ_QYTJ01000020.1 Protein Homology CDS 135665 136108 . + 0 ID=cds-WP_001162138.1;Parent=gene-D5F92_RS04310;Dbxref=GenBank:WP_001162138.1;Name=WP_001162138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480489.1;locus_tag=D5F92_RS04310;product=flavodoxin;protein_id=WP_001162138.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 136185 136460 . + . ID=gene-D5F92_RS04315;Name=D5F92_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04315;old_locus_tag=D5F92_04330 NZ_QYTJ01000020.1 Protein Homology CDS 136185 136460 . + 0 ID=cds-WP_000418127.1;Parent=gene-D5F92_RS04315;Dbxref=GenBank:WP_000418127.1;Name=WP_000418127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418127.1;locus_tag=D5F92_RS04315;product=chorismate mutase;protein_id=WP_000418127.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 136453 137649 . + . ID=gene-D5F92_RS04320;Name=D5F92_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04320;old_locus_tag=D5F92_04335 NZ_QYTJ01000020.1 Protein Homology CDS 136453 137649 . + 0 ID=cds-WP_016502638.1;Parent=gene-D5F92_RS04320;Dbxref=GenBank:WP_016502638.1;Name=WP_016502638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595711.1;locus_tag=D5F92_RS04320;product=voltage-gated chloride channel family protein;protein_id=WP_016502638.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 138234 138581 . + . ID=gene-D5F92_RS04325;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=D5F92_RS04325;old_locus_tag=D5F92_04340 NZ_QYTJ01000020.1 Protein Homology CDS 138234 138581 . + 0 ID=cds-WP_016502639.1;Parent=gene-D5F92_RS04325;Dbxref=GenBank:WP_016502639.1;Name=WP_016502639.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502639.1;locus_tag=D5F92_RS04325;product=50S ribosomal protein L19;protein_id=WP_016502639.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 138692 138763 . + . ID=gene-D5F92_RS04330;Name=D5F92_RS04330;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS04330;old_locus_tag=D5F92_04345 NZ_QYTJ01000020.1 tRNAscan-SE tRNA 138692 138763 . + . ID=rna-D5F92_RS04330;Parent=gene-D5F92_RS04330;anticodon=(pos:138725..138727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS04330;product=tRNA-Arg NZ_QYTJ01000020.1 tRNAscan-SE exon 138692 138763 . + . ID=exon-D5F92_RS04330-1;Parent=rna-D5F92_RS04330;anticodon=(pos:138725..138727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS04330;product=tRNA-Arg NZ_QYTJ01000020.1 RefSeq gene 139053 140258 . + . ID=gene-D5F92_RS04335;Name=D5F92_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04335;old_locus_tag=D5F92_04350 NZ_QYTJ01000020.1 Protein Homology CDS 139053 140258 . + 0 ID=cds-WP_000078933.1;Parent=gene-D5F92_RS04335;Dbxref=GenBank:WP_000078933.1;Name=WP_000078933.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078928.1;locus_tag=D5F92_RS04335;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_000078933.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 140376 140936 . + . ID=gene-D5F92_RS04340;Name=D5F92_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04340;old_locus_tag=D5F92_04355 NZ_QYTJ01000020.1 Protein Homology CDS 140376 140936 . + 0 ID=cds-WP_001106189.1;Parent=gene-D5F92_RS04340;Dbxref=GenBank:WP_001106189.1;Name=WP_001106189.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106189.1;locus_tag=D5F92_RS04340;product=HAD-IA family hydrolase;protein_id=WP_001106189.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 140937 142889 . + . ID=gene-D5F92_RS04345;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=D5F92_RS04345;old_locus_tag=D5F92_04360 NZ_QYTJ01000020.1 Protein Homology CDS 140937 142889 . + 0 ID=cds-WP_016502640.1;Parent=gene-D5F92_RS04345;Dbxref=GenBank:WP_016502640.1;Name=WP_016502640.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002283665.1;locus_tag=D5F92_RS04345;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_016502640.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 142983 144707 . + . ID=gene-D5F92_RS04350;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=D5F92_RS04350;old_locus_tag=D5F92_04365 NZ_QYTJ01000020.1 Protein Homology CDS 142983 144707 . + 0 ID=cds-WP_000094337.1;Parent=gene-D5F92_RS04350;Dbxref=GenBank:WP_000094337.1;Name=WP_000094337.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648073.1;locus_tag=D5F92_RS04350;product=septation ring formation regulator EzrA;protein_id=WP_000094337.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 144801 145442 . + . ID=gene-D5F92_RS04355;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=D5F92_RS04355;old_locus_tag=D5F92_04370 NZ_QYTJ01000020.1 Protein Homology CDS 144801 145442 . + 0 ID=cds-WP_016502641.1;Parent=gene-D5F92_RS04355;Dbxref=GenBank:WP_016502641.1;Name=WP_016502641.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589687.1;locus_tag=D5F92_RS04355;product=phosphoserine phosphatase SerB;protein_id=WP_016502641.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 145463 145948 . - . ID=gene-D5F92_RS04360;Name=D5F92_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04360;old_locus_tag=D5F92_04375 NZ_QYTJ01000020.1 Protein Homology CDS 145463 145948 . - 0 ID=cds-WP_000409124.1;Parent=gene-D5F92_RS04360;Dbxref=GenBank:WP_000409124.1;Name=WP_000409124.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000409123.1;locus_tag=D5F92_RS04360;product=NUDIX hydrolase;protein_id=WP_000409124.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 145961 146416 . - . ID=gene-D5F92_RS04365;Name=D5F92_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04365;old_locus_tag=D5F92_04380 NZ_QYTJ01000020.1 Protein Homology CDS 145961 146416 . - 0 ID=cds-WP_016502642.1;Parent=gene-D5F92_RS04365;Dbxref=GenBank:WP_016502642.1;Name=WP_016502642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137375.1;locus_tag=D5F92_RS04365;product=YueI family protein;protein_id=WP_016502642.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 146614 147921 . + . ID=gene-D5F92_RS04370;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=D5F92_RS04370;old_locus_tag=D5F92_04385 NZ_QYTJ01000020.1 Protein Homology CDS 146614 147921 . + 0 ID=cds-WP_000022832.1;Parent=gene-D5F92_RS04370;Dbxref=GenBank:WP_000022832.1;Name=WP_000022832.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=D5F92_RS04370;product=surface-displayed alpha-enolase;protein_id=WP_000022832.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 148029 149033 . - . ID=gene-D5F92_RS04375;Name=D5F92_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04375;old_locus_tag=D5F92_04390 NZ_QYTJ01000020.1 Protein Homology CDS 148029 149033 . - 0 ID=cds-WP_124749478.1;Parent=gene-D5F92_RS04375;Dbxref=GenBank:WP_124749478.1;Name=WP_124749478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648393.1;locus_tag=D5F92_RS04375;product=DNA/RNA non-specific endonuclease;protein_id=WP_124749478.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 149262 150545 . + . ID=gene-D5F92_RS04380;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=D5F92_RS04380;old_locus_tag=D5F92_04395 NZ_QYTJ01000020.1 Protein Homology CDS 149262 150545 . + 0 ID=cds-WP_124749480.1;Parent=gene-D5F92_RS04380;Dbxref=GenBank:WP_124749480.1;Name=WP_124749480.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772014.1;locus_tag=D5F92_RS04380;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_124749480.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 150538 151050 . + . ID=gene-D5F92_RS04385;Name=D5F92_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04385;old_locus_tag=D5F92_04400 NZ_QYTJ01000020.1 Protein Homology CDS 150538 151050 . + 0 ID=cds-WP_001127189.1;Parent=gene-D5F92_RS04385;Dbxref=GenBank:WP_001127189.1;Name=WP_001127189.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127191.1;locus_tag=D5F92_RS04385;product=shikimate kinase;protein_id=WP_001127189.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 151107 152480 . + . ID=gene-D5F92_RS04390;Name=D5F92_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04390;old_locus_tag=D5F92_04405 NZ_QYTJ01000020.1 Protein Homology CDS 151107 152480 . + 0 ID=cds-WP_016502647.1;Parent=gene-D5F92_RS04390;Dbxref=GenBank:WP_016502647.1;Name=WP_016502647.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089330.1;locus_tag=D5F92_RS04390;product=LCP family protein;protein_id=WP_016502647.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 152581 154215 . + . ID=gene-D5F92_RS04395;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=D5F92_RS04395;old_locus_tag=D5F92_04410 NZ_QYTJ01000020.1 Protein Homology CDS 152581 154215 . + 0 ID=cds-WP_124785448.1;Parent=gene-D5F92_RS04395;Dbxref=GenBank:WP_124785448.1;Name=WP_124785448.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902660.1;locus_tag=D5F92_RS04395;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_124785448.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 154232 154513 . + . ID=gene-D5F92_RS04400;Name=D5F92_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04400;old_locus_tag=D5F92_04415 NZ_QYTJ01000020.1 Protein Homology CDS 154232 154513 . + 0 ID=cds-WP_030127105.1;Parent=gene-D5F92_RS04400;Dbxref=GenBank:WP_030127105.1;Name=WP_030127105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267199.1;locus_tag=D5F92_RS04400;product=CD1845 family protein;protein_id=WP_030127105.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 154601 155380 . + . ID=gene-D5F92_RS04405;Name=D5F92_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04405;old_locus_tag=D5F92_04420 NZ_QYTJ01000020.1 Protein Homology CDS 154601 155380 . + 0 ID=cds-WP_030127104.1;Parent=gene-D5F92_RS04405;Dbxref=GenBank:WP_030127104.1;Name=WP_030127104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018365310.1;locus_tag=D5F92_RS04405;product=replication initiator protein A;protein_id=WP_030127104.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 155377 156228 . + . ID=gene-D5F92_RS04410;Name=D5F92_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04410;old_locus_tag=D5F92_04425 NZ_QYTJ01000020.1 Protein Homology CDS 155377 156228 . + 0 ID=cds-WP_030127103.1;Parent=gene-D5F92_RS04410;Dbxref=GenBank:WP_030127103.1;Name=WP_030127103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817918.1;locus_tag=D5F92_RS04410;product=ATP-binding protein;protein_id=WP_030127103.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 156225 156710 . + . ID=gene-D5F92_RS04415;Name=D5F92_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04415;old_locus_tag=D5F92_04430 NZ_QYTJ01000020.1 Protein Homology CDS 156225 156710 . + 0 ID=cds-WP_030127102.1;Parent=gene-D5F92_RS04415;Dbxref=GenBank:WP_030127102.1;Name=WP_030127102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009346332.1;locus_tag=D5F92_RS04415;product=PcfB family protein;protein_id=WP_030127102.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 156707 158491 . + . ID=gene-D5F92_RS04420;Name=D5F92_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04420;old_locus_tag=D5F92_04435 NZ_QYTJ01000020.1 Protein Homology CDS 156707 158491 . + 0 ID=cds-WP_124785450.1;Parent=gene-D5F92_RS04420;Dbxref=GenBank:WP_124785450.1;Name=WP_124785450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565768.1;locus_tag=D5F92_RS04420;product=VirD4-like conjugal transfer protein%2C CD1115 family;protein_id=WP_124785450.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 158658 158969 . + . ID=gene-D5F92_RS04430;Name=D5F92_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04430;old_locus_tag=D5F92_04445 NZ_QYTJ01000020.1 Protein Homology CDS 158658 158969 . + 0 ID=cds-WP_000807041.1;Parent=gene-D5F92_RS04430;Dbxref=GenBank:WP_000807041.1;Name=WP_000807041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006270424.1;locus_tag=D5F92_RS04430;product=single-stranded DNA-binding protein;protein_id=WP_000807041.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 158973 159188 . + . ID=gene-D5F92_RS04435;Name=D5F92_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04435;old_locus_tag=D5F92_04450 NZ_QYTJ01000020.1 Protein Homology CDS 158973 159188 . + 0 ID=cds-WP_000394208.1;Parent=gene-D5F92_RS04435;Dbxref=GenBank:WP_000394208.1;Name=WP_000394208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003068281.1;locus_tag=D5F92_RS04435;product=Maff2 family mobile element protein;protein_id=WP_000394208.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 159208 160071 . + . ID=gene-D5F92_RS04440;Name=D5F92_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04440;old_locus_tag=D5F92_04455 NZ_QYTJ01000020.1 Protein Homology CDS 159208 160071 . + 0 ID=cds-WP_000466906.1;Parent=gene-D5F92_RS04440;Dbxref=GenBank:WP_000466906.1;Name=WP_000466906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466911.1;locus_tag=D5F92_RS04440;product=VirB6/TrbL-like conjugal transfer protein%2C CD1112 family;protein_id=WP_000466906.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 160089 160352 . + . ID=gene-D5F92_RS04445;Name=D5F92_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04445;old_locus_tag=D5F92_04460 NZ_QYTJ01000020.1 Protein Homology CDS 160089 160352 . + 0 ID=cds-WP_124785452.1;Parent=gene-D5F92_RS04445;Dbxref=GenBank:WP_124785452.1;Name=WP_124785452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906453.1;locus_tag=D5F92_RS04445;product=conjugal transfer protein;protein_id=WP_124785452.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 160356 160745 . + . ID=gene-D5F92_RS04450;Name=D5F92_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04450;old_locus_tag=D5F92_04465 NZ_QYTJ01000020.1 Protein Homology CDS 160356 160745 . + 0 ID=cds-WP_005542007.1;Parent=gene-D5F92_RS04450;Dbxref=GenBank:WP_005542007.1;Name=WP_005542007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003426094.1;locus_tag=D5F92_RS04450;product=PrgI family protein;protein_id=WP_005542007.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 160657 163086 . + . ID=gene-D5F92_RS04455;Name=D5F92_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04455;old_locus_tag=D5F92_04470 NZ_QYTJ01000020.1 Protein Homology CDS 160657 163086 . + 0 ID=cds-WP_124785454.1;Parent=gene-D5F92_RS04455;Dbxref=GenBank:WP_124785454.1;Name=WP_124785454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653482.1;locus_tag=D5F92_RS04455;product=VirB4-like conjugal transfer ATPase%2C CD1110 family;protein_id=WP_124785454.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 163090 165222 . + . ID=gene-D5F92_RS04460;Name=D5F92_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04460;old_locus_tag=D5F92_04475 NZ_QYTJ01000020.1 Protein Homology CDS 163090 165222 . + 0 ID=cds-WP_030127090.1;Parent=gene-D5F92_RS04460;Dbxref=GenBank:WP_030127090.1;Name=WP_030127090.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516792.1;locus_tag=D5F92_RS04460;product=CHAP domain-containing protein;protein_id=WP_030127090.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 165234 165473 . + . ID=gene-D5F92_RS04465;Name=D5F92_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04465;old_locus_tag=D5F92_04480 NZ_QYTJ01000020.1 Protein Homology CDS 165234 165473 . + 0 ID=cds-WP_030127089.1;Parent=gene-D5F92_RS04465;Dbxref=GenBank:WP_030127089.1;Name=WP_030127089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711920.1;locus_tag=D5F92_RS04465;product=hypothetical protein;protein_id=WP_030127089.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 165448 166989 . + . ID=gene-D5F92_RS04470;Name=D5F92_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04470;old_locus_tag=D5F92_04485 NZ_QYTJ01000020.1 Protein Homology CDS 165448 166989 . + 0 ID=cds-WP_124785456.1;Parent=gene-D5F92_RS04470;Dbxref=GenBank:WP_124785456.1;Name=WP_124785456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019107298.1;locus_tag=D5F92_RS04470;product=CD1107 family mobile element protein;protein_id=WP_124785456.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 167084 168796 . + . ID=gene-D5F92_RS04475;Name=D5F92_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04475;old_locus_tag=D5F92_04490 NZ_QYTJ01000020.1 Protein Homology CDS 167084 168796 . + 0 ID=cds-WP_032461281.1;Parent=gene-D5F92_RS04475;Dbxref=GenBank:WP_032461281.1;Name=WP_032461281.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007895166.1;locus_tag=D5F92_RS04475;product=DNA topoisomerase 3;protein_id=WP_032461281.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 168881 170347 . + . ID=gene-D5F92_RS04480;Name=D5F92_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04480;old_locus_tag=D5F92_04495 NZ_QYTJ01000020.1 Protein Homology CDS 168881 170347 . + 0 ID=cds-WP_030127086.1;Parent=gene-D5F92_RS04480;Dbxref=GenBank:WP_030127086.1;Name=WP_030127086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.6;locus_tag=D5F92_RS04480;product=RNA-binding domain-containing protein;protein_id=WP_030127086.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 170540 179257 . + . ID=gene-D5F92_RS04485;Name=D5F92_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04485;old_locus_tag=D5F92_04500 NZ_QYTJ01000020.1 Protein Homology CDS 170540 179257 . + 0 ID=cds-WP_032462556.1;Parent=gene-D5F92_RS04485;Dbxref=GenBank:WP_032462556.1;Name=WP_032462556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247056.1;locus_tag=D5F92_RS04485;product=helicase-related protein;protein_id=WP_032462556.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 179299 179958 . + . ID=gene-D5F92_RS04490;Name=D5F92_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04490;old_locus_tag=D5F92_04505 NZ_QYTJ01000020.1 Protein Homology CDS 179299 179958 . + 0 ID=cds-WP_124785458.1;Parent=gene-D5F92_RS04490;Dbxref=GenBank:WP_124785458.1;Name=WP_124785458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006627214.1;locus_tag=D5F92_RS04490;product=single-stranded DNA-binding protein;protein_id=WP_124785458.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 180027 181358 . - . ID=gene-D5F92_RS04495;Name=D5F92_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04495;old_locus_tag=D5F92_04510 NZ_QYTJ01000020.1 Protein Homology CDS 180027 181358 . - 0 ID=cds-WP_030127081.1;Parent=gene-D5F92_RS04495;Dbxref=GenBank:WP_030127081.1;Name=WP_030127081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820672.1;locus_tag=D5F92_RS04495;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_030127081.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 181361 181717 . - . ID=gene-D5F92_RS04500;Name=D5F92_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04500;old_locus_tag=D5F92_04515 NZ_QYTJ01000020.1 Protein Homology CDS 181361 181717 . - 0 ID=cds-WP_030127080.1;Parent=gene-D5F92_RS04500;Dbxref=GenBank:WP_030127080.1;Name=WP_030127080.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013383.1;locus_tag=D5F92_RS04500;product=plasmid mobilization protein;protein_id=WP_030127080.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 182012 182239 . + . ID=gene-D5F92_RS04505;Name=D5F92_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04505;old_locus_tag=D5F92_04520 NZ_QYTJ01000020.1 Protein Homology CDS 182012 182239 . + 0 ID=cds-WP_030127079.1;Parent=gene-D5F92_RS04505;Dbxref=GenBank:WP_030127079.1;Name=WP_030127079.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620812.1;locus_tag=D5F92_RS04505;product=helix-turn-helix domain-containing protein;protein_id=WP_030127079.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 182260 182916 . + . ID=gene-D5F92_RS04510;Name=D5F92_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04510;old_locus_tag=D5F92_04525 NZ_QYTJ01000020.1 Protein Homology CDS 182260 182916 . + 0 ID=cds-WP_030127078.1;Parent=gene-D5F92_RS04510;Dbxref=GenBank:WP_030127078.1;Name=WP_030127078.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.6;locus_tag=D5F92_RS04510;product=response regulator transcription factor;protein_id=WP_030127078.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 182920 183771 . + . ID=gene-D5F92_RS04515;Name=D5F92_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04515;old_locus_tag=D5F92_04530 NZ_QYTJ01000020.1 Protein Homology CDS 182920 183771 . + 0 ID=cds-WP_030127077.1;Parent=gene-D5F92_RS04515;Dbxref=GenBank:WP_030127077.1;Name=WP_030127077.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=D5F92_RS04515;product=sensor histidine kinase;protein_id=WP_030127077.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 183856 184128 . + . ID=gene-D5F92_RS04520;Name=D5F92_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04520;old_locus_tag=D5F92_04535 NZ_QYTJ01000020.1 Protein Homology CDS 183856 184128 . + 0 ID=cds-WP_030127076.1;Parent=gene-D5F92_RS04520;Dbxref=GenBank:WP_030127076.1;Name=WP_030127076.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=D5F92_RS04520;product=ATP-binding cassette domain-containing protein;protein_id=WP_030127076.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 184444 184758 . + . ID=gene-D5F92_RS04530;Name=D5F92_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04530;old_locus_tag=D5F92_04545 NZ_QYTJ01000020.1 Protein Homology CDS 184444 184758 . + 0 ID=cds-WP_000420682.1;Parent=gene-D5F92_RS04530;Dbxref=GenBank:WP_000420682.1;Name=WP_000420682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148869.1;locus_tag=D5F92_RS04530;product=YdcP family protein;protein_id=WP_000420682.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 184774 185160 . + . ID=gene-D5F92_RS04535;Name=D5F92_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04535;old_locus_tag=D5F92_04550 NZ_QYTJ01000020.1 Protein Homology CDS 184774 185160 . + 0 ID=cds-WP_000985015.1;Parent=gene-D5F92_RS04535;Dbxref=GenBank:WP_000985015.1;Name=WP_000985015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985015.1;locus_tag=D5F92_RS04535;product=YdcP family protein;protein_id=WP_000985015.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 185189 186574 . + . ID=gene-D5F92_RS04540;Name=D5F92_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04540;old_locus_tag=D5F92_04555 NZ_QYTJ01000020.1 Protein Homology CDS 185189 186574 . + 0 ID=cds-WP_000813488.1;Parent=gene-D5F92_RS04540;Dbxref=GenBank:WP_000813488.1;Name=WP_000813488.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813487.1;locus_tag=D5F92_RS04540;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_000813488.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 186752 187957 . + . ID=gene-D5F92_RS04550;Name=mobT;gbkey=Gene;gene=mobT;gene_biotype=protein_coding;locus_tag=D5F92_RS04550;old_locus_tag=D5F92_04565 NZ_QYTJ01000020.1 Protein Homology CDS 186752 187957 . + 0 ID=cds-WP_000398284.1;Parent=gene-D5F92_RS04550;Dbxref=GenBank:WP_000398284.1;Name=WP_000398284.1;Ontology_term=GO:0006270,GO:0003677;gbkey=CDS;gene=mobT;go_function=DNA binding|0003677||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398284.1;locus_tag=D5F92_RS04550;product=MobT family relaxase;protein_id=WP_000398284.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 188000 188221 . + . ID=gene-D5F92_RS04555;Name=D5F92_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04555;old_locus_tag=D5F92_04570 NZ_QYTJ01000020.1 Protein Homology CDS 188000 188221 . + 0 ID=cds-WP_001009056.1;Parent=gene-D5F92_RS04555;Dbxref=GenBank:WP_001009056.1;Name=WP_001009056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002570387.1;locus_tag=D5F92_RS04555;product=hypothetical protein;protein_id=WP_001009056.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 188338 188835 . + . ID=gene-D5F92_RS04560;Name=D5F92_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04560;old_locus_tag=D5F92_04575 NZ_QYTJ01000020.1 Protein Homology CDS 188338 188835 . + 0 ID=cds-WP_000342539.1;Parent=gene-D5F92_RS04560;Dbxref=GenBank:WP_000342539.1;Name=WP_000342539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342537.1;locus_tag=D5F92_RS04560;product=antirestriction protein ArdA;protein_id=WP_000342539.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 188924 189316 . + . ID=gene-D5F92_RS04565;Name=D5F92_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04565;old_locus_tag=D5F92_04580 NZ_QYTJ01000020.1 Protein Homology CDS 188924 189316 . + 0 ID=cds-WP_000723888.1;Parent=gene-D5F92_RS04565;Dbxref=GenBank:WP_000723888.1;Name=WP_000723888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345009.1;locus_tag=D5F92_RS04565;product=conjugal transfer protein;protein_id=WP_000723888.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 189300 191747 . + . ID=gene-D5F92_RS04570;Name=tcpF;gbkey=Gene;gene=tcpF;gene_biotype=protein_coding;locus_tag=D5F92_RS04570;old_locus_tag=D5F92_04585 NZ_QYTJ01000020.1 Protein Homology CDS 189300 191747 . + 0 ID=cds-WP_000331160.1;Parent=gene-D5F92_RS04570;Dbxref=GenBank:WP_000331160.1;Name=WP_000331160.1;gbkey=CDS;gene=tcpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331151.1;locus_tag=D5F92_RS04570;product=conjugal transfer ATPase TcpF;protein_id=WP_000331160.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 191750 193927 . + . ID=gene-D5F92_RS04575;Name=D5F92_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04575;old_locus_tag=D5F92_04590 NZ_QYTJ01000020.1 Protein Homology CDS 191750 193927 . + 0 ID=cds-WP_000804748.1;Parent=gene-D5F92_RS04575;Dbxref=GenBank:WP_000804748.1;Name=WP_000804748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646277.1;locus_tag=D5F92_RS04575;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_000804748.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 193924 194925 . + . ID=gene-D5F92_RS04580;Name=D5F92_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04580;old_locus_tag=D5F92_04595 NZ_QYTJ01000020.1 Protein Homology CDS 193924 194925 . + 0 ID=cds-WP_000769868.1;Parent=gene-D5F92_RS04580;Dbxref=GenBank:WP_000769868.1;Name=WP_000769868.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368130.1;locus_tag=D5F92_RS04580;product=bifunctional lytic transglycosylase/C40 family peptidase;protein_id=WP_000769868.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 194922 195857 . + . ID=gene-D5F92_RS04585;Name=D5F92_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04585;old_locus_tag=D5F92_04600 NZ_QYTJ01000020.1 Protein Homology CDS 194922 195857 . + 0 ID=cds-WP_001224320.1;Parent=gene-D5F92_RS04585;Dbxref=GenBank:WP_001224320.1;Name=WP_001224320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002989471.1;locus_tag=D5F92_RS04585;product=conjugal transfer protein;protein_id=WP_001224320.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 196171 196218 . + . ID=gene-D5F92_RS11530;Name=D5F92_RS11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11530;partial=true;pseudo=true;start_range=.,196171 NZ_QYTJ01000020.1 Protein Homology CDS 196171 196218 . + 0 ID=cds-D5F92_RS11530;Parent=gene-D5F92_RS11530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011335.0;locus_tag=D5F92_RS11530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,196171;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 196234 198153 . + . ID=gene-D5F92_RS04600;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=D5F92_RS04600;old_locus_tag=D5F92_04615 NZ_QYTJ01000020.1 Protein Homology CDS 196234 198153 . + 0 ID=cds-WP_030127075.1;Parent=gene-D5F92_RS04600;Dbxref=GenBank:WP_030127075.1;Name=WP_030127075.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=D5F92_RS04600;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=WP_030127075.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 198272 198343 . + . ID=gene-D5F92_RS04605;Name=D5F92_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04605;old_locus_tag=D5F92_04620 NZ_QYTJ01000020.1 Protein Homology CDS 198272 198343 . + 0 ID=cds-WP_260426610.1;Parent=gene-D5F92_RS04605;Dbxref=GenBank:WP_260426610.1;Name=WP_260426610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=D5F92_RS04605;product=cysteine-rich KTR domain-containing protein;protein_id=WP_260426610.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 198530 199651 . + . ID=gene-D5F92_RS04610;Name=D5F92_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04610;old_locus_tag=D5F92_04625 NZ_QYTJ01000020.1 Protein Homology CDS 198530 199651 . + 0 ID=cds-WP_124785460.1;Parent=gene-D5F92_RS04610;Dbxref=GenBank:WP_124785460.1;Name=WP_124785460.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009536911.1;locus_tag=D5F92_RS04610;product=IS1249 family transposase;protein_id=WP_124785460.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 199642 199791 . + . ID=gene-D5F92_RS04615;Name=D5F92_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04615;old_locus_tag=D5F92_04630 NZ_QYTJ01000020.1 Protein Homology CDS 199642 199791 . + 0 ID=cds-WP_124785462.1;Parent=gene-D5F92_RS04615;Dbxref=GenBank:WP_124785462.1;Name=WP_124785462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388730.1;locus_tag=D5F92_RS04615;product=cysteine-rich KTR domain-containing protein;protein_id=WP_124785462.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 199851 200204 . - . ID=gene-D5F92_RS04620;Name=D5F92_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04620;old_locus_tag=D5F92_04635 NZ_QYTJ01000020.1 Protein Homology CDS 199851 200204 . - 0 ID=cds-WP_001227347.1;Parent=gene-D5F92_RS04620;Dbxref=GenBank:WP_001227347.1;Name=WP_001227347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227347.1;locus_tag=D5F92_RS04620;product=helix-turn-helix transcriptional regulator;protein_id=WP_001227347.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 200709 201131 . + . ID=gene-D5F92_RS04630;Name=D5F92_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04630;old_locus_tag=D5F92_04645 NZ_QYTJ01000020.1 Protein Homology CDS 200709 201131 . + 0 ID=cds-WP_000804885.1;Parent=gene-D5F92_RS04630;Dbxref=GenBank:WP_000804885.1;Name=WP_000804885.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006733729.1;locus_tag=D5F92_RS04630;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_000804885.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 201128 201358 . + . ID=gene-D5F92_RS04635;Name=D5F92_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04635;old_locus_tag=D5F92_04650 NZ_QYTJ01000020.1 Protein Homology CDS 201128 201358 . + 0 ID=cds-WP_000857133.1;Parent=gene-D5F92_RS04635;Dbxref=GenBank:WP_000857133.1;Name=WP_000857133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002411750.1;locus_tag=D5F92_RS04635;product=helix-turn-helix domain-containing protein;protein_id=WP_000857133.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 201819 202022 . + . ID=gene-D5F92_RS04645;Name=D5F92_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04645;old_locus_tag=D5F92_04660 NZ_QYTJ01000020.1 Protein Homology CDS 201819 202022 . + 0 ID=cds-WP_000814511.1;Parent=gene-D5F92_RS04645;Dbxref=GenBank:WP_000814511.1;Name=WP_000814511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006730246.1;locus_tag=D5F92_RS04645;product=excisionase;protein_id=WP_000814511.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 202104 203321 . + . ID=gene-D5F92_RS04650;Name=D5F92_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04650;old_locus_tag=D5F92_04665 NZ_QYTJ01000020.1 Protein Homology CDS 202104 203321 . + 0 ID=cds-WP_001291561.1;Parent=gene-D5F92_RS04650;Dbxref=GenBank:WP_001291561.1;Name=WP_001291561.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220015.1;locus_tag=D5F92_RS04650;product=tyrosine-type recombinase/integrase;protein_id=WP_001291561.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 203487 203936 . + . ID=gene-D5F92_RS04655;Name=D5F92_RS04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS04655;old_locus_tag=D5F92_04670;partial=true;pseudo=true;start_range=.,203487 NZ_QYTJ01000020.1 Protein Homology CDS 203487 203936 . + 0 ID=cds-D5F92_RS04655;Parent=gene-D5F92_RS04655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891106.1;locus_tag=D5F92_RS04655;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,203487;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 203929 206448 . + . ID=gene-D5F92_RS04660;Name=D5F92_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04660;old_locus_tag=D5F92_04675 NZ_QYTJ01000020.1 Protein Homology CDS 203929 206448 . + 0 ID=cds-WP_030127073.1;Parent=gene-D5F92_RS04660;Dbxref=GenBank:WP_030127073.1;Name=WP_030127073.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.7;locus_tag=D5F92_RS04660;product=ABC transporter permease;protein_id=WP_030127073.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 206716 207126 . + . ID=gene-D5F92_RS04670;Name=D5F92_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04670;old_locus_tag=D5F92_04685 NZ_QYTJ01000020.1 Protein Homology CDS 206716 207126 . + 0 ID=cds-WP_030127072.1;Parent=gene-D5F92_RS04670;Dbxref=GenBank:WP_030127072.1;Name=WP_030127072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004634151.1;locus_tag=D5F92_RS04670;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_030127072.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 207611 207772 . + . ID=gene-D5F92_RS04675;Name=D5F92_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04675;old_locus_tag=D5F92_04690 NZ_QYTJ01000020.1 Protein Homology CDS 207611 207772 . + 0 ID=cds-WP_030127071.1;Parent=gene-D5F92_RS04675;Dbxref=GenBank:WP_030127071.1;Name=WP_030127071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368178.1;locus_tag=D5F92_RS04675;product=hypothetical protein;protein_id=WP_030127071.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 207862 209538 . + . ID=gene-D5F92_RS04680;Name=D5F92_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04680;old_locus_tag=D5F92_04695 NZ_QYTJ01000020.1 Protein Homology CDS 207862 209538 . + 0 ID=cds-WP_124785463.1;Parent=gene-D5F92_RS04680;Dbxref=GenBank:WP_124785463.1;Name=WP_124785463.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031860.1;locus_tag=D5F92_RS04680;product=recombinase family protein;protein_id=WP_124785463.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 210060 210578 . + . ID=gene-D5F92_RS04685;Name=D5F92_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04685;old_locus_tag=D5F92_04700 NZ_QYTJ01000020.1 Protein Homology CDS 210060 210578 . + 0 ID=cds-WP_124749484.1;Parent=gene-D5F92_RS04685;Dbxref=GenBank:WP_124749484.1;Name=WP_124749484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013852041.1;locus_tag=D5F92_RS04685;product=ClbS/DfsB family four-helix bundle protein;protein_id=WP_124749484.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 210881 211411 . - . ID=gene-D5F92_RS04690;Name=D5F92_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04690;old_locus_tag=D5F92_04705 NZ_QYTJ01000020.1 Protein Homology CDS 210881 211411 . - 0 ID=cds-WP_124749486.1;Parent=gene-D5F92_RS04690;Dbxref=GenBank:WP_124749486.1;Name=WP_124749486.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445921.1;locus_tag=D5F92_RS04690;product=TetR/AcrR family transcriptional regulator;protein_id=WP_124749486.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq gene 211581 215033 . + . ID=gene-D5F92_RS04695;Name=D5F92_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04695;old_locus_tag=D5F92_04710 NZ_QYTJ01000020.1 Protein Homology CDS 211581 215033 . + 0 ID=cds-WP_124785465.1;Parent=gene-D5F92_RS04695;Dbxref=GenBank:WP_124785465.1;Name=WP_124785465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003082558.1;locus_tag=D5F92_RS04695;product=collagen-flanked surface repeat-containing protein;protein_id=WP_124785465.1;transl_table=11 NZ_QYTJ01000020.1 RefSeq pseudogene 215466 215654 . + . ID=gene-D5F92_RS11480;Name=D5F92_RS11480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11480;old_locus_tag=D5F92_04715;partial=true;pseudo=true;start_range=.,215466 NZ_QYTJ01000020.1 Protein Homology CDS 215466 215654 . + 0 ID=cds-D5F92_RS11480;Parent=gene-D5F92_RS11480;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740329.1;locus_tag=D5F92_RS11480;partial=true;product=hypothetical protein;pseudo=true;start_range=.,215466;transl_table=11 ##sequence-region NZ_QYTJ01000021.1 1 17292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000021.1 RefSeq region 1 17292 . + . ID=NZ_QYTJ01000021.1:1..17292;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000021.1 RefSeq gene 245 1618 . + . ID=gene-D5F92_RS04710;Name=D5F92_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04710;old_locus_tag=D5F92_04725 NZ_QYTJ01000021.1 Protein Homology CDS 245 1618 . + 0 ID=cds-WP_000914221.1;Parent=gene-D5F92_RS04710;Dbxref=GenBank:WP_000914221.1;Name=WP_000914221.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000914222.1;locus_tag=D5F92_RS04710;product=MFS transporter;protein_id=WP_000914221.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 1773 2078 . - . ID=gene-D5F92_RS04715;Name=D5F92_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04715;old_locus_tag=D5F92_04730 NZ_QYTJ01000021.1 Protein Homology CDS 1773 2078 . - 0 ID=cds-WP_000220571.1;Parent=gene-D5F92_RS04715;Dbxref=GenBank:WP_000220571.1;Name=WP_000220571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220570.1;locus_tag=D5F92_RS04715;product=hypothetical protein;protein_id=WP_000220571.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 2241 3227 . + . ID=gene-D5F92_RS04720;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=D5F92_RS04720;old_locus_tag=D5F92_04735 NZ_QYTJ01000021.1 Protein Homology CDS 2241 3227 . + 0 ID=cds-WP_001290916.1;Parent=gene-D5F92_RS04720;Dbxref=GenBank:WP_001290916.1;Name=WP_001290916.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290916.1;locus_tag=D5F92_RS04720;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001290916.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 3264 4391 . - . ID=gene-D5F92_RS04725;Name=D5F92_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04725;old_locus_tag=D5F92_04740 NZ_QYTJ01000021.1 Protein Homology CDS 3264 4391 . - 0 ID=cds-WP_016503038.1;Parent=gene-D5F92_RS04725;Dbxref=GenBank:WP_016503038.1;Name=WP_016503038.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683737.1;locus_tag=D5F92_RS04725;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016503038.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 4495 5514 . + . ID=gene-D5F92_RS04730;Name=D5F92_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04730;old_locus_tag=D5F92_04745 NZ_QYTJ01000021.1 Protein Homology CDS 4495 5514 . + 0 ID=cds-WP_162138208.1;Parent=gene-D5F92_RS04730;Dbxref=GenBank:WP_162138208.1;Name=WP_162138208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932930.1;locus_tag=D5F92_RS04730;product=ammonium transporter;protein_id=WP_162138208.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 5839 6645 . + . ID=gene-D5F92_RS04735;Name=D5F92_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04735;old_locus_tag=D5F92_04750 NZ_QYTJ01000021.1 Protein Homology CDS 5839 6645 . + 0 ID=cds-WP_000037656.1;Parent=gene-D5F92_RS04735;Dbxref=GenBank:WP_000037656.1;Name=WP_000037656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037660.1;locus_tag=D5F92_RS04735;product=transporter substrate-binding domain-containing protein;protein_id=WP_000037656.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 6728 7231 . + . ID=gene-D5F92_RS04740;Name=D5F92_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04740;old_locus_tag=D5F92_04755 NZ_QYTJ01000021.1 Protein Homology CDS 6728 7231 . + 0 ID=cds-WP_000249813.1;Parent=gene-D5F92_RS04740;Dbxref=GenBank:WP_000249813.1;Name=WP_000249813.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480102.1;locus_tag=D5F92_RS04740;product=YkgJ family cysteine cluster protein;protein_id=WP_000249813.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 7335 7511 . + . ID=gene-D5F92_RS04745;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=D5F92_RS04745;old_locus_tag=D5F92_04760 NZ_QYTJ01000021.1 Protein Homology CDS 7335 7511 . + 0 ID=cds-WP_000048058.1;Parent=gene-D5F92_RS04745;Dbxref=GenBank:WP_000048058.1;Name=WP_000048058.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884573.1;locus_tag=D5F92_RS04745;product=30S ribosomal protein S21;protein_id=WP_000048058.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 7609 7986 . - . ID=gene-D5F92_RS04750;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=D5F92_RS04750;old_locus_tag=D5F92_04765 NZ_QYTJ01000021.1 Protein Homology CDS 7609 7986 . - 0 ID=cds-WP_000588846.1;Parent=gene-D5F92_RS04750;Dbxref=GenBank:WP_000588846.1;Name=WP_000588846.1;Ontology_term=GO:0006810,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588846.1;locus_tag=D5F92_RS04750;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_000588846.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 8176 9984 . + . ID=gene-D5F92_RS04755;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=D5F92_RS04755;old_locus_tag=D5F92_04770 NZ_QYTJ01000021.1 Protein Homology CDS 8176 9984 . + 0 ID=cds-WP_086163433.1;Parent=gene-D5F92_RS04755;Dbxref=GenBank:WP_086163433.1;Name=WP_086163433.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560591.1;locus_tag=D5F92_RS04755;product=DNA primase;protein_id=WP_086163433.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 9992 11101 . + . ID=gene-D5F92_RS04760;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=D5F92_RS04760;old_locus_tag=D5F92_04775 NZ_QYTJ01000021.1 Protein Homology CDS 9992 11101 . + 0 ID=cds-WP_000818341.1;Parent=gene-D5F92_RS04760;Dbxref=GenBank:WP_000818341.1;Name=WP_000818341.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019787874.1;locus_tag=D5F92_RS04760;product=RNA polymerase sigma factor RpoD;protein_id=WP_000818341.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 11209 11550 . + . ID=gene-D5F92_RS04765;Name=D5F92_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04765;old_locus_tag=D5F92_04780 NZ_QYTJ01000021.1 Protein Homology CDS 11209 11550 . + 0 ID=cds-WP_000005643.1;Parent=gene-D5F92_RS04765;Dbxref=GenBank:WP_000005643.1;Name=WP_000005643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766829.1;locus_tag=D5F92_RS04765;product=metal-sulfur cluster assembly factor;protein_id=WP_000005643.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 11640 12494 . + . ID=gene-D5F92_RS04770;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=D5F92_RS04770;old_locus_tag=D5F92_04785 NZ_QYTJ01000021.1 Protein Homology CDS 11640 12494 . + 0 ID=cds-WP_000600896.1;Parent=gene-D5F92_RS04770;Dbxref=GenBank:WP_000600896.1;Name=WP_000600896.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647909.1;locus_tag=D5F92_RS04770;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_000600896.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 12611 13765 . + . ID=gene-D5F92_RS04775;Name=cps2T;gbkey=Gene;gene=cps2T;gene_biotype=protein_coding;gene_synonym=wchF;locus_tag=D5F92_RS04775;old_locus_tag=D5F92_04790 NZ_QYTJ01000021.1 Protein Homology CDS 12611 13765 . + 0 ID=cds-WP_001154392.1;Parent=gene-D5F92_RS04775;Dbxref=GenBank:WP_001154392.1;Name=WP_001154392.1;Ontology_term=GO:0016757;gbkey=CDS;gene=cps2T;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154391.1;locus_tag=D5F92_RS04775;product=beta 1-4 rhamnosyltransferase Cps2T;protein_id=WP_001154392.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 13755 14696 . + . ID=gene-D5F92_RS04780;Name=D5F92_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04780;old_locus_tag=D5F92_04795 NZ_QYTJ01000021.1 Protein Homology CDS 13755 14696 . + 0 ID=cds-WP_016503035.1;Parent=gene-D5F92_RS04780;Dbxref=GenBank:WP_016503035.1;Name=WP_016503035.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503035.1;locus_tag=D5F92_RS04780;product=glycosyltransferase family 2 protein;protein_id=WP_016503035.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 14698 15429 . + . ID=gene-D5F92_RS04785;Name=D5F92_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04785;old_locus_tag=D5F92_04800 NZ_QYTJ01000021.1 Protein Homology CDS 14698 15429 . + 0 ID=cds-WP_000976127.1;Parent=gene-D5F92_RS04785;Dbxref=GenBank:WP_000976127.1;Name=WP_000976127.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976126.1;locus_tag=D5F92_RS04785;product=glycosyltransferase family 2 protein;protein_id=WP_000976127.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 15426 15779 . + . ID=gene-D5F92_RS04790;Name=D5F92_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04790;old_locus_tag=D5F92_04805 NZ_QYTJ01000021.1 Protein Homology CDS 15426 15779 . + 0 ID=cds-WP_000050394.1;Parent=gene-D5F92_RS04790;Dbxref=GenBank:WP_000050394.1;Name=WP_000050394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050393.1;locus_tag=D5F92_RS04790;product=DUF2304 domain-containing protein;protein_id=WP_000050394.1;transl_table=11 NZ_QYTJ01000021.1 RefSeq gene 15772 17292 . + . ID=gene-D5F92_RS04795;Name=D5F92_RS04795;end_range=17292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04795;old_locus_tag=D5F92_04810;partial=true NZ_QYTJ01000021.1 Protein Homology CDS 15772 17292 . + 0 ID=cds-WP_124785468.1;Parent=gene-D5F92_RS04795;Dbxref=GenBank:WP_124785468.1;Name=WP_124785468.1;end_range=17292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037459.1;locus_tag=D5F92_RS04795;partial=true;product=SpaA isopeptide-forming pilin-related protein;protein_id=WP_124785468.1;transl_table=11 ##sequence-region NZ_QYTJ01000022.1 1 21991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000022.1 RefSeq region 1 21991 . + . ID=NZ_QYTJ01000022.1:1..21991;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000022.1 RefSeq gene 1 1389 . - . ID=gene-D5F92_RS04800;Name=D5F92_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04800;old_locus_tag=D5F92_04815;partial=true;start_range=.,1 NZ_QYTJ01000022.1 Protein Homology CDS 1 1389 . - 0 ID=cds-WP_124785470.1;Parent=gene-D5F92_RS04800;Dbxref=GenBank:WP_124785470.1;Name=WP_124785470.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814045.1;locus_tag=D5F92_RS04800;partial=true;product=proline--tRNA ligase;protein_id=WP_124785470.1;start_range=.,1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 1481 2740 . - . ID=gene-D5F92_RS04805;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=D5F92_RS04805;old_locus_tag=D5F92_04820 NZ_QYTJ01000022.1 Protein Homology CDS 1481 2740 . - 0 ID=cds-WP_000900651.1;Parent=gene-D5F92_RS04805;Dbxref=GenBank:WP_000900651.1;Name=WP_000900651.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900646.1;locus_tag=D5F92_RS04805;product=RIP metalloprotease RseP;protein_id=WP_000900651.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 2771 3565 . - . ID=gene-D5F92_RS04810;Name=D5F92_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04810;old_locus_tag=D5F92_04825 NZ_QYTJ01000022.1 Protein Homology CDS 2771 3565 . - 0 ID=cds-WP_016503255.1;Parent=gene-D5F92_RS04810;Dbxref=GenBank:WP_016503255.1;Name=WP_016503255.1;Ontology_term=GO:0016024,GO:0004605,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002275264.1;locus_tag=D5F92_RS04810;product=phosphatidate cytidylyltransferase;protein_id=WP_016503255.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 3580 4332 . - . ID=gene-D5F92_RS04815;Name=D5F92_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04815;old_locus_tag=D5F92_04830 NZ_QYTJ01000022.1 Protein Homology CDS 3580 4332 . - 0 ID=cds-WP_016503256.1;Parent=gene-D5F92_RS04815;Dbxref=GenBank:WP_016503256.1;Name=WP_016503256.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469562.1;locus_tag=D5F92_RS04815;product=isoprenyl transferase;protein_id=WP_016503256.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 4499 4840 . - . ID=gene-D5F92_RS04820;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=D5F92_RS04820;old_locus_tag=D5F92_04835 NZ_QYTJ01000022.1 Protein Homology CDS 4499 4840 . - 0 ID=cds-WP_000056607.1;Parent=gene-D5F92_RS04820;Dbxref=GenBank:WP_000056607.1;Name=WP_000056607.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056605.1;locus_tag=D5F92_RS04820;product=preprotein translocase subunit YajC;protein_id=WP_000056607.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 4917 5261 . - . ID=gene-D5F92_RS04825;Name=D5F92_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04825;old_locus_tag=D5F92_04840 NZ_QYTJ01000022.1 Protein Homology CDS 4917 5261 . - 0 ID=cds-WP_000286792.1;Parent=gene-D5F92_RS04825;Dbxref=GenBank:WP_000286792.1;Name=WP_000286792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286789.1;locus_tag=D5F92_RS04825;product=thioredoxin domain-containing protein;protein_id=WP_000286792.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq pseudogene 5452 6614 . - . ID=gene-D5F92_RS04835;Name=D5F92_RS04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS04835;old_locus_tag=D5F92_04850;pseudo=true NZ_QYTJ01000022.1 Protein Homology CDS 5452 6614 . - 0 ID=cds-D5F92_RS04835;Parent=gene-D5F92_RS04835;Note=frameshifted;Ontology_term=GO:0004471,GO:0004473,GO:0046872,GO:0051287;gbkey=CDS;go_function=malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,malate dehydrogenase (decarboxylating) (NADP+) activity|0004473||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649394.1;locus_tag=D5F92_RS04835;product=NAD(P)-dependent malic enzyme;pseudo=true;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 6639 7976 . - . ID=gene-D5F92_RS04840;Name=D5F92_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04840;old_locus_tag=D5F92_04855 NZ_QYTJ01000022.1 Protein Homology CDS 6639 7976 . - 0 ID=cds-WP_016503257.1;Parent=gene-D5F92_RS04840;Dbxref=GenBank:WP_016503257.1;Name=WP_016503257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786046.1;locus_tag=D5F92_RS04840;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_016503257.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 8180 9655 . + . ID=gene-D5F92_RS04845;Name=D5F92_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04845;old_locus_tag=D5F92_04860 NZ_QYTJ01000022.1 Protein Homology CDS 8180 9655 . + 0 ID=cds-WP_046052134.1;Parent=gene-D5F92_RS04845;Dbxref=GenBank:WP_046052134.1;Name=WP_046052134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728121.1;locus_tag=D5F92_RS04845;product=cache domain-containing protein;protein_id=WP_046052134.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 9657 10385 . + . ID=gene-D5F92_RS04850;Name=D5F92_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04850;old_locus_tag=D5F92_04865 NZ_QYTJ01000022.1 Protein Homology CDS 9657 10385 . + 0 ID=cds-WP_124785472.1;Parent=gene-D5F92_RS04850;Dbxref=GenBank:WP_124785472.1;Name=WP_124785472.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000382773.1;locus_tag=D5F92_RS04850;product=response regulator;protein_id=WP_124785472.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 10357 11352 . - . ID=gene-D5F92_RS04855;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D5F92_RS04855;old_locus_tag=D5F92_04870 NZ_QYTJ01000022.1 Protein Homology CDS 10357 11352 . - 0 ID=cds-WP_000279626.1;Parent=gene-D5F92_RS04855;Dbxref=GenBank:WP_000279626.1;Name=WP_000279626.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279623.1;locus_tag=D5F92_RS04855;product=UDP-glucose 4-epimerase GalE;protein_id=WP_000279626.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 11440 13047 . - . ID=gene-D5F92_RS04860;Name=D5F92_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04860;old_locus_tag=D5F92_04875 NZ_QYTJ01000022.1 Protein Homology CDS 11440 13047 . - 0 ID=cds-WP_124749607.1;Parent=gene-D5F92_RS04860;Dbxref=GenBank:WP_124749607.1;Name=WP_124749607.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481260.1;locus_tag=D5F92_RS04860;product=glycoside hydrolase family 13 protein;protein_id=WP_124749607.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 13176 14309 . - . ID=gene-D5F92_RS04865;Name=D5F92_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04865;old_locus_tag=D5F92_04880 NZ_QYTJ01000022.1 Protein Homology CDS 13176 14309 . - 0 ID=cds-WP_000229966.1;Parent=gene-D5F92_RS04865;Dbxref=GenBank:WP_000229966.1;Name=WP_000229966.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988014.1;locus_tag=D5F92_RS04865;product=ABC transporter ATP-binding protein;protein_id=WP_000229966.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 14410 15261 . - . ID=gene-D5F92_RS04870;Name=D5F92_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04870;old_locus_tag=D5F92_04885 NZ_QYTJ01000022.1 Protein Homology CDS 14410 15261 . - 0 ID=cds-WP_000345943.1;Parent=gene-D5F92_RS04870;Dbxref=GenBank:WP_000345943.1;Name=WP_000345943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000347002.1;locus_tag=D5F92_RS04870;product=helix-turn-helix domain-containing protein;protein_id=WP_000345943.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq pseudogene 15356 16251 . - . ID=gene-D5F92_RS04875;Name=D5F92_RS04875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS04875;old_locus_tag=D5F92_04890;pseudo=true NZ_QYTJ01000022.1 Protein Homology CDS 15356 16251 . - 0 ID=cds-D5F92_RS04875;Parent=gene-D5F92_RS04875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018631.1;locus_tag=D5F92_RS04875;product=aldose 1-epimerase family protein;pseudo=true;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 16305 17282 . - . ID=gene-D5F92_RS04880;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=D5F92_RS04880;old_locus_tag=D5F92_04895 NZ_QYTJ01000022.1 Protein Homology CDS 16305 17282 . - 0 ID=cds-WP_000524689.1;Parent=gene-D5F92_RS04880;Dbxref=GenBank:WP_000524689.1;Name=WP_000524689.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524687.1;locus_tag=D5F92_RS04880;product=tagatose-bisphosphate aldolase;protein_id=WP_000524689.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 17284 18216 . - . ID=gene-D5F92_RS04885;Name=D5F92_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04885;old_locus_tag=D5F92_04900 NZ_QYTJ01000022.1 Protein Homology CDS 17284 18216 . - 0 ID=cds-WP_016503262.1;Parent=gene-D5F92_RS04885;Dbxref=GenBank:WP_016503262.1;Name=WP_016503262.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604238.1;locus_tag=D5F92_RS04885;product=tagatose-6-phosphate kinase;protein_id=WP_016503262.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 18227 18742 . - . ID=gene-D5F92_RS04890;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=D5F92_RS04890;old_locus_tag=D5F92_04905 NZ_QYTJ01000022.1 Protein Homology CDS 18227 18742 . - 0 ID=cds-WP_000686152.1;Parent=gene-D5F92_RS04890;Dbxref=GenBank:WP_000686152.1;Name=WP_000686152.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027025.1;locus_tag=D5F92_RS04890;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_000686152.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 18763 19188 . - . ID=gene-D5F92_RS04895;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=D5F92_RS04895;old_locus_tag=D5F92_04910 NZ_QYTJ01000022.1 Protein Homology CDS 18763 19188 . - 0 ID=cds-WP_016503263.1;Parent=gene-D5F92_RS04895;Dbxref=GenBank:WP_016503263.1;Name=WP_016503263.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503263.1;locus_tag=D5F92_RS04895;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_016503263.1;transl_table=11 NZ_QYTJ01000022.1 RefSeq gene 19434 21884 . - . ID=gene-D5F92_RS04900;Name=D5F92_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04900;old_locus_tag=D5F92_04915 NZ_QYTJ01000022.1 Protein Homology CDS 19434 21884 . - 0 ID=cds-WP_124785474.1;Parent=gene-D5F92_RS04900;Dbxref=GenBank:WP_124785474.1;Name=WP_124785474.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771303.1;locus_tag=D5F92_RS04900;product=sialidase family protein;protein_id=WP_124785474.1;transl_table=11 ##sequence-region NZ_QYTJ01000023.1 1 97300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000023.1 RefSeq region 1 97300 . + . ID=NZ_QYTJ01000023.1:1..97300;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000023.1 RefSeq gene 211 3039 . - . ID=gene-D5F92_RS04910;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=D5F92_RS04910;old_locus_tag=D5F92_04925 NZ_QYTJ01000023.1 Protein Homology CDS 211 3039 . - 0 ID=cds-WP_016503174.1;Parent=gene-D5F92_RS04910;Dbxref=GenBank:WP_016503174.1;Name=WP_016503174.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932063.1;locus_tag=D5F92_RS04910;product=excinuclease ABC subunit UvrA;protein_id=WP_016503174.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 3171 3842 . - . ID=gene-D5F92_RS04915;Name=D5F92_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04915;old_locus_tag=D5F92_04930 NZ_QYTJ01000023.1 Protein Homology CDS 3171 3842 . - 0 ID=cds-WP_124749435.1;Parent=gene-D5F92_RS04915;Dbxref=GenBank:WP_124749435.1;Name=WP_124749435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174850.1;locus_tag=D5F92_RS04915;product=DUF1129 domain-containing protein;protein_id=WP_124749435.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 3867 4811 . - . ID=gene-D5F92_RS04920;Name=D5F92_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04920;old_locus_tag=D5F92_04935 NZ_QYTJ01000023.1 Protein Homology CDS 3867 4811 . - 0 ID=cds-WP_000812121.1;Parent=gene-D5F92_RS04920;Dbxref=GenBank:WP_000812121.1;Name=WP_000812121.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003085337.1;locus_tag=D5F92_RS04920;product=magnesium transporter CorA family protein;protein_id=WP_000812121.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 4981 5220 . - . ID=gene-D5F92_RS04925;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=D5F92_RS04925;old_locus_tag=D5F92_04940 NZ_QYTJ01000023.1 Protein Homology CDS 4981 5220 . - 0 ID=cds-WP_000068665.1;Parent=gene-D5F92_RS04925;Dbxref=GenBank:WP_000068665.1;Name=WP_000068665.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=D5F92_RS04925;product=30S ribosomal protein S18;protein_id=WP_000068665.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 5265 5756 . - . ID=gene-D5F92_RS04930;Name=D5F92_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04930;old_locus_tag=D5F92_04945 NZ_QYTJ01000023.1 Protein Homology CDS 5265 5756 . - 0 ID=cds-WP_000609586.1;Parent=gene-D5F92_RS04930;Dbxref=GenBank:WP_000609586.1;Name=WP_000609586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083754.1;locus_tag=D5F92_RS04930;product=single-stranded DNA-binding protein;protein_id=WP_000609586.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 5768 6055 . - . ID=gene-D5F92_RS04935;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=D5F92_RS04935;old_locus_tag=D5F92_04950 NZ_QYTJ01000023.1 Protein Homology CDS 5768 6055 . - 0 ID=cds-WP_001151773.1;Parent=gene-D5F92_RS04935;Dbxref=GenBank:WP_001151773.1;Name=WP_001151773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151773.1;locus_tag=D5F92_RS04935;product=30S ribosomal protein S6;protein_id=WP_001151773.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 7118 8272 . + . ID=gene-D5F92_RS04940;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=D5F92_RS04940;old_locus_tag=D5F92_04955 NZ_QYTJ01000023.1 Protein Homology CDS 7118 8272 . + 0 ID=cds-WP_311766400.1;Parent=gene-D5F92_RS04940;Dbxref=GenBank:WP_311766400.1;Name=WP_311766400.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983107.1;locus_tag=D5F92_RS04940;product=A/G-specific adenine glycosylase;protein_id=WP_311766400.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 8449 9042 . + . ID=gene-D5F92_RS04945;Name=D5F92_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04945;old_locus_tag=D5F92_04960 NZ_QYTJ01000023.1 Protein Homology CDS 8449 9042 . + 0 ID=cds-WP_016503178.1;Parent=gene-D5F92_RS04945;Dbxref=GenBank:WP_016503178.1;Name=WP_016503178.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402392.1;locus_tag=D5F92_RS04945;product=helix-turn-helix domain-containing protein;protein_id=WP_016503178.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 9088 9420 . - . ID=gene-D5F92_RS04950;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D5F92_RS04950;old_locus_tag=D5F92_04965 NZ_QYTJ01000023.1 Protein Homology CDS 9088 9420 . - 0 ID=cds-WP_001932060.1;Parent=gene-D5F92_RS04950;Dbxref=GenBank:WP_001932060.1;Name=WP_001932060.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001162959.1;locus_tag=D5F92_RS04950;product=thioredoxin;protein_id=WP_001932060.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 9483 9983 . - . ID=gene-D5F92_RS04955;Name=D5F92_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04955;old_locus_tag=D5F92_04970 NZ_QYTJ01000023.1 Protein Homology CDS 9483 9983 . - 0 ID=cds-WP_000446812.1;Parent=gene-D5F92_RS04955;Dbxref=GenBank:WP_000446812.1;Name=WP_000446812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767232.1;locus_tag=D5F92_RS04955;product=phosphatase PAP2 family protein;protein_id=WP_000446812.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 9987 12326 . - . ID=gene-D5F92_RS04960;Name=D5F92_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04960;old_locus_tag=D5F92_04975 NZ_QYTJ01000023.1 Protein Homology CDS 9987 12326 . - 0 ID=cds-WP_001060323.1;Parent=gene-D5F92_RS04960;Dbxref=GenBank:WP_001060323.1;Name=WP_001060323.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650215.1;locus_tag=D5F92_RS04960;product=endonuclease MutS2;protein_id=WP_001060323.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 12411 12953 . - . ID=gene-D5F92_RS04965;Name=D5F92_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04965;old_locus_tag=D5F92_04980 NZ_QYTJ01000023.1 Protein Homology CDS 12411 12953 . - 0 ID=cds-WP_000949956.1;Parent=gene-D5F92_RS04965;Dbxref=GenBank:WP_000949956.1;Name=WP_000949956.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949955.1;locus_tag=D5F92_RS04965;product=CvpA family protein;protein_id=WP_000949956.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 12956 13267 . - . ID=gene-D5F92_RS04970;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=D5F92_RS04970;old_locus_tag=D5F92_04985 NZ_QYTJ01000023.1 Protein Homology CDS 12956 13267 . - 0 ID=cds-WP_000448289.1;Parent=gene-D5F92_RS04970;Dbxref=GenBank:WP_000448289.1;Name=WP_000448289.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000448289.1;locus_tag=D5F92_RS04970;product=cell division protein ZapA;protein_id=WP_000448289.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 13378 14271 . + . ID=gene-D5F92_RS04975;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=D5F92_RS04975;old_locus_tag=D5F92_04990 NZ_QYTJ01000023.1 Protein Homology CDS 13378 14271 . + 0 ID=cds-WP_016503181.1;Parent=gene-D5F92_RS04975;Dbxref=GenBank:WP_016503181.1;Name=WP_016503181.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771143.1;locus_tag=D5F92_RS04975;product=ribonuclease HIII;protein_id=WP_016503181.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 14287 14880 . + . ID=gene-D5F92_RS04980;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F92_RS04980;old_locus_tag=D5F92_04995 NZ_QYTJ01000023.1 Protein Homology CDS 14287 14880 . + 0 ID=cds-WP_000657514.1;Parent=gene-D5F92_RS04980;Dbxref=GenBank:WP_000657514.1;Name=WP_000657514.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657511.1;locus_tag=D5F92_RS04980;product=signal peptidase I;protein_id=WP_000657514.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq pseudogene 15009 17211 . + . ID=gene-D5F92_RS04985;Name=recD2;end_range=17211,.;gbkey=Gene;gene=recD2;gene_biotype=pseudogene;locus_tag=D5F92_RS04985;old_locus_tag=D5F92_05000;partial=true;pseudo=true NZ_QYTJ01000023.1 Protein Homology CDS 15009 17211 . + 0 ID=cds-D5F92_RS04985;Parent=gene-D5F92_RS04985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006281,GO:0003677,GO:0043139;end_range=17211,.;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019804593.1;locus_tag=D5F92_RS04985;partial=true;product=SF1B family DNA helicase RecD2;pseudo=true;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 17543 18025 . + . ID=gene-D5F92_RS04990;Name=D5F92_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS04990;old_locus_tag=D5F92_05005 NZ_QYTJ01000023.1 Protein Homology CDS 17543 18025 . + 0 ID=cds-WP_000255475.1;Parent=gene-D5F92_RS04990;Dbxref=GenBank:WP_000255475.1;Name=WP_000255475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255479.1;locus_tag=D5F92_RS04990;product=hypothetical protein;protein_id=WP_000255475.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 18096 19190 . - . ID=gene-D5F92_RS04995;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=D5F92_RS04995;old_locus_tag=D5F92_05010 NZ_QYTJ01000023.1 Protein Homology CDS 18096 19190 . - 0 ID=cds-WP_000904560.1;Parent=gene-D5F92_RS04995;Dbxref=GenBank:WP_000904560.1;Name=WP_000904560.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904560.1;locus_tag=D5F92_RS04995;product=DNA polymerase IV;protein_id=WP_000904560.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 19375 21687 . + . ID=gene-D5F92_RS05000;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=D5F92_RS05000;old_locus_tag=D5F92_05015 NZ_QYTJ01000023.1 Protein Homology CDS 19375 21687 . + 0 ID=cds-WP_016503184.1;Parent=gene-D5F92_RS05000;Dbxref=GenBank:WP_016503184.1;Name=WP_016503184.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503184.1;locus_tag=D5F92_RS05000;product=formate C-acetyltransferase;protein_id=WP_016503184.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 21788 22162 . + . ID=gene-D5F92_RS05005;Name=D5F92_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05005;old_locus_tag=D5F92_05020 NZ_QYTJ01000023.1 Protein Homology CDS 21788 22162 . + 0 ID=cds-WP_000931879.1;Parent=gene-D5F92_RS05005;Dbxref=GenBank:WP_000931879.1;Name=WP_000931879.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000931877.1;locus_tag=D5F92_RS05005;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000931879.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 22197 23126 . - . ID=gene-D5F92_RS05010;Name=D5F92_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05010;old_locus_tag=D5F92_05025 NZ_QYTJ01000023.1 Protein Homology CDS 22197 23126 . - 0 ID=cds-WP_016503185.1;Parent=gene-D5F92_RS05010;Dbxref=GenBank:WP_016503185.1;Name=WP_016503185.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598173.1;locus_tag=D5F92_RS05010;product=serine hydrolase domain-containing protein;protein_id=WP_016503185.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 23123 23878 . - . ID=gene-D5F92_RS05015;Name=D5F92_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05015;old_locus_tag=D5F92_05030 NZ_QYTJ01000023.1 Protein Homology CDS 23123 23878 . - 0 ID=cds-WP_124785476.1;Parent=gene-D5F92_RS05015;Dbxref=GenBank:WP_124785476.1;Name=WP_124785476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171837.1;locus_tag=D5F92_RS05015;product=CppA family protein;protein_id=WP_124785476.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 24003 24899 . + . ID=gene-D5F92_RS05020;Name=D5F92_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05020;old_locus_tag=D5F92_05035 NZ_QYTJ01000023.1 Protein Homology CDS 24003 24899 . + 0 ID=cds-WP_001006192.1;Parent=gene-D5F92_RS05020;Dbxref=GenBank:WP_001006192.1;Name=WP_001006192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768349.1;locus_tag=D5F92_RS05020;product=sulfite exporter TauE/SafE family protein;protein_id=WP_001006192.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 24977 25825 . - . ID=gene-D5F92_RS05025;Name=gla;gbkey=Gene;gene=gla;gene_biotype=protein_coding;locus_tag=D5F92_RS05025;old_locus_tag=D5F92_05040 NZ_QYTJ01000023.1 Protein Homology CDS 24977 25825 . - 0 ID=cds-WP_000570241.1;Parent=gene-D5F92_RS05025;Dbxref=GenBank:WP_000570241.1;Name=WP_000570241.1;Ontology_term=GO:0006071,GO:0015267;gbkey=CDS;gene=gla;go_function=channel activity|0015267||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570237.1;locus_tag=D5F92_RS05025;product=aquaglyceroporin Gla;protein_id=WP_000570241.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 25994 26446 . - . ID=gene-D5F92_RS05030;Name=D5F92_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05030;old_locus_tag=D5F92_05045 NZ_QYTJ01000023.1 Protein Homology CDS 25994 26446 . - 0 ID=cds-WP_000192462.1;Parent=gene-D5F92_RS05030;Dbxref=GenBank:WP_000192462.1;Name=WP_000192462.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645875.1;locus_tag=D5F92_RS05030;product=universal stress protein;protein_id=WP_000192462.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 26464 27666 . - . ID=gene-D5F92_RS05035;Name=D5F92_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05035;old_locus_tag=D5F92_05050 NZ_QYTJ01000023.1 Protein Homology CDS 26464 27666 . - 0 ID=cds-WP_000389617.1;Parent=gene-D5F92_RS05035;Dbxref=GenBank:WP_000389617.1;Name=WP_000389617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389619.1;locus_tag=D5F92_RS05035;product=MFS transporter;protein_id=WP_000389617.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 27822 28481 . + . ID=gene-D5F92_RS05040;Name=D5F92_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05040;old_locus_tag=D5F92_05055 NZ_QYTJ01000023.1 Protein Homology CDS 27822 28481 . + 0 ID=cds-WP_001016380.1;Parent=gene-D5F92_RS05040;Dbxref=GenBank:WP_001016380.1;Name=WP_001016380.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646447.1;locus_tag=D5F92_RS05040;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001016380.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 28505 30790 . + . ID=gene-D5F92_RS05045;Name=D5F92_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05045;old_locus_tag=D5F92_05060 NZ_QYTJ01000023.1 Protein Homology CDS 28505 30790 . + 0 ID=cds-WP_016503188.1;Parent=gene-D5F92_RS05045;Dbxref=GenBank:WP_016503188.1;Name=WP_016503188.1;Ontology_term=GO:0006508,GO:0008239;gbkey=CDS;go_function=dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270186.1;locus_tag=D5F92_RS05045;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_016503188.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 30794 31153 . + . ID=gene-D5F92_RS05050;Name=D5F92_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05050;old_locus_tag=D5F92_05065 NZ_QYTJ01000023.1 Protein Homology CDS 30794 31153 . + 0 ID=cds-WP_000771943.1;Parent=gene-D5F92_RS05050;Dbxref=GenBank:WP_000771943.1;Name=WP_000771943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000771945.1;locus_tag=D5F92_RS05050;product=hypothetical protein;protein_id=WP_000771943.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 31199 32179 . + . ID=gene-D5F92_RS05055;Name=D5F92_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05055;old_locus_tag=D5F92_05070 NZ_QYTJ01000023.1 Protein Homology CDS 31199 32179 . + 0 ID=cds-WP_016481182.1;Parent=gene-D5F92_RS05055;Dbxref=GenBank:WP_016481182.1;Name=WP_016481182.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481182.1;locus_tag=D5F92_RS05055;product=polyprenyl synthetase family protein;protein_id=WP_016481182.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 32264 34012 . - . ID=gene-D5F92_RS05060;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=D5F92_RS05060;old_locus_tag=D5F92_05075 NZ_QYTJ01000023.1 Protein Homology CDS 32264 34012 . - 0 ID=cds-WP_000472836.1;Parent=gene-D5F92_RS05060;Dbxref=GenBank:WP_000472836.1;Name=WP_000472836.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472828.1;locus_tag=D5F92_RS05060;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_000472836.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 34005 35723 . - . ID=gene-D5F92_RS05065;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=D5F92_RS05065;old_locus_tag=D5F92_05080 NZ_QYTJ01000023.1 Protein Homology CDS 34005 35723 . - 0 ID=cds-WP_000884538.1;Parent=gene-D5F92_RS05065;Dbxref=GenBank:WP_000884538.1;Name=WP_000884538.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632247.1;locus_tag=D5F92_RS05065;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_000884538.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 35723 36742 . - . ID=gene-D5F92_RS05070;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=D5F92_RS05070;old_locus_tag=D5F92_05085 NZ_QYTJ01000023.1 Protein Homology CDS 35723 36742 . - 0 ID=cds-WP_001275292.1;Parent=gene-D5F92_RS05070;Dbxref=GenBank:WP_001275292.1;Name=WP_001275292.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275291.1;locus_tag=D5F92_RS05070;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_001275292.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 36743 38170 . - . ID=gene-D5F92_RS05075;Name=D5F92_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05075;old_locus_tag=D5F92_05090 NZ_QYTJ01000023.1 Protein Homology CDS 36743 38170 . - 0 ID=cds-WP_124749433.1;Parent=gene-D5F92_RS05075;Dbxref=GenBank:WP_124749433.1;Name=WP_124749433.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632249.1;locus_tag=D5F92_RS05075;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_124749433.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 38273 39481 . - . ID=gene-D5F92_RS05080;Name=D5F92_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05080;old_locus_tag=D5F92_05095 NZ_QYTJ01000023.1 Protein Homology CDS 38273 39481 . - 0 ID=cds-WP_000659003.1;Parent=gene-D5F92_RS05080;Dbxref=GenBank:WP_000659003.1;Name=WP_000659003.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659000.1;locus_tag=D5F92_RS05080;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000659003.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 39494 40393 . - . ID=gene-D5F92_RS05085;Name=D5F92_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05085;old_locus_tag=D5F92_05100 NZ_QYTJ01000023.1 Protein Homology CDS 39494 40393 . - 0 ID=cds-WP_000174555.1;Parent=gene-D5F92_RS05085;Dbxref=GenBank:WP_000174555.1;Name=WP_000174555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174555.1;locus_tag=D5F92_RS05085;product=prenyltransferase;protein_id=WP_000174555.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq pseudogene 40802 41101 . - . ID=gene-D5F92_RS11400;Name=D5F92_RS11400;end_range=41101,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11400;partial=true;pseudo=true NZ_QYTJ01000023.1 Protein Homology CDS 40802 41101 . - 0 ID=cds-D5F92_RS11400;Parent=gene-D5F92_RS11400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41101,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000928240.1;locus_tag=D5F92_RS11400;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000023.1 RefSeq pseudogene 41123 41565 . - . ID=gene-D5F92_RS11535;Name=D5F92_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11535;partial=true;pseudo=true;start_range=.,41123 NZ_QYTJ01000023.1 Protein Homology CDS 41123 41565 . - 0 ID=cds-D5F92_RS11535;Parent=gene-D5F92_RS11535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037493.1;locus_tag=D5F92_RS11535;partial=true;product=hypothetical protein;pseudo=true;start_range=.,41123;transl_table=11 NZ_QYTJ01000023.1 RefSeq pseudogene 41777 41971 . + . ID=gene-D5F92_RS05095;Name=D5F92_RS05095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS05095;old_locus_tag=D5F92_05110;partial=true;pseudo=true;start_range=.,41777 NZ_QYTJ01000023.1 Protein Homology CDS 41777 41971 . + 0 ID=cds-D5F92_RS05095;Parent=gene-D5F92_RS05095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011527759.1;locus_tag=D5F92_RS05095;partial=true;product=restriction endonuclease subunit S;pseudo=true;start_range=.,41777;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 41984 43564 . + . ID=gene-D5F92_RS05100;Name=D5F92_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05100;old_locus_tag=D5F92_05115 NZ_QYTJ01000023.1 Protein Homology CDS 41984 43564 . + 0 ID=cds-WP_016503192.1;Parent=gene-D5F92_RS05100;Dbxref=GenBank:WP_016503192.1;Name=WP_016503192.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818745.1;locus_tag=D5F92_RS05100;product=type I restriction-modification system subunit M;protein_id=WP_016503192.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 43854 44153 . + . ID=gene-D5F92_RS05105;Name=D5F92_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05105;old_locus_tag=D5F92_05120 NZ_QYTJ01000023.1 Protein Homology CDS 43854 44153 . + 0 ID=cds-WP_016503193.1;Parent=gene-D5F92_RS05105;Dbxref=GenBank:WP_016503193.1;Name=WP_016503193.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503193.1;locus_tag=D5F92_RS05105;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_016503193.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 44314 45504 . + . ID=gene-D5F92_RS05110;Name=D5F92_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05110;old_locus_tag=D5F92_05125 NZ_QYTJ01000023.1 Protein Homology CDS 44314 45504 . + 0 ID=cds-WP_000244914.1;Parent=gene-D5F92_RS05110;Dbxref=GenBank:WP_000244914.1;Name=WP_000244914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244913.1;locus_tag=D5F92_RS05110;product=SAM-dependent methyltransferase;protein_id=WP_000244914.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 45574 46299 . - . ID=gene-D5F92_RS05115;Name=D5F92_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05115;old_locus_tag=D5F92_05130 NZ_QYTJ01000023.1 Protein Homology CDS 45574 46299 . - 0 ID=cds-WP_016503194.1;Parent=gene-D5F92_RS05115;Dbxref=GenBank:WP_016503194.1;Name=WP_016503194.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292015.1;locus_tag=D5F92_RS05115;product=MerR family transcriptional regulator;protein_id=WP_016503194.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 46426 47013 . - . ID=gene-D5F92_RS05120;Name=D5F92_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05120;old_locus_tag=D5F92_05135 NZ_QYTJ01000023.1 Protein Homology CDS 46426 47013 . - 0 ID=cds-WP_000811666.1;Parent=gene-D5F92_RS05120;Dbxref=GenBank:WP_000811666.1;Name=WP_000811666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650205.1;locus_tag=D5F92_RS05120;product=3'-5' exonuclease;protein_id=WP_000811666.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 47057 47593 . - . ID=gene-D5F92_RS05125;Name=D5F92_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05125;old_locus_tag=D5F92_05140 NZ_QYTJ01000023.1 Protein Homology CDS 47057 47593 . - 0 ID=cds-WP_000215421.1;Parent=gene-D5F92_RS05125;Dbxref=GenBank:WP_000215421.1;Name=WP_000215421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766787.1;locus_tag=D5F92_RS05125;product=DUF536 domain-containing protein;protein_id=WP_000215421.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 47728 48900 . + . ID=gene-D5F92_RS05130;Name=D5F92_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05130;old_locus_tag=D5F92_05145 NZ_QYTJ01000023.1 Protein Homology CDS 47728 48900 . + 0 ID=cds-WP_000683564.1;Parent=gene-D5F92_RS05130;Dbxref=GenBank:WP_000683564.1;Name=WP_000683564.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632253.1;locus_tag=D5F92_RS05130;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000683564.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 48944 49726 . - . ID=gene-D5F92_RS05135;Name=D5F92_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05135;old_locus_tag=D5F92_05150 NZ_QYTJ01000023.1 Protein Homology CDS 48944 49726 . - 0 ID=cds-WP_000338252.1;Parent=gene-D5F92_RS05135;Dbxref=GenBank:WP_000338252.1;Name=WP_000338252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005780.1;locus_tag=D5F92_RS05135;product=DUF4931 domain-containing protein;protein_id=WP_000338252.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 49885 50154 . + . ID=gene-D5F92_RS05140;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=D5F92_RS05140;old_locus_tag=D5F92_05155 NZ_QYTJ01000023.1 Protein Homology CDS 49885 50154 . + 0 ID=cds-WP_001085659.1;Parent=gene-D5F92_RS05140;Dbxref=GenBank:WP_001085659.1;Name=WP_001085659.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085658.1;locus_tag=D5F92_RS05140;product=30S ribosomal protein S14;protein_id=WP_001085659.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 50516 51541 . - . ID=gene-D5F92_RS05150;Name=D5F92_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05150;old_locus_tag=D5F92_05165 NZ_QYTJ01000023.1 Protein Homology CDS 50516 51541 . - 0 ID=cds-WP_016503195.1;Parent=gene-D5F92_RS05150;Dbxref=GenBank:WP_016503195.1;Name=WP_016503195.1;Ontology_term=GO:0006567,GO:0004793;gbkey=CDS;go_function=threonine aldolase activity|0004793||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503195.1;locus_tag=D5F92_RS05150;product=threonine aldolase family protein;protein_id=WP_016503195.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 51660 52670 . - . ID=gene-D5F92_RS05155;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=D5F92_RS05155;old_locus_tag=D5F92_05170 NZ_QYTJ01000023.1 Protein Homology CDS 51660 52670 . - 0 ID=cds-WP_016503196.1;Parent=gene-D5F92_RS05155;Dbxref=GenBank:WP_016503196.1;Name=WP_016503196.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655088.1;locus_tag=D5F92_RS05155;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_016503196.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 52746 53153 . - . ID=gene-D5F92_RS05160;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D5F92_RS05160;old_locus_tag=D5F92_05175 NZ_QYTJ01000023.1 Protein Homology CDS 52746 53153 . - 0 ID=cds-WP_000445943.1;Parent=gene-D5F92_RS05160;Dbxref=GenBank:WP_000445943.1;Name=WP_000445943.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643831.1;locus_tag=D5F92_RS05160;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_000445943.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 53155 53847 . - . ID=gene-D5F92_RS05165;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=D5F92_RS05165;old_locus_tag=D5F92_05180 NZ_QYTJ01000023.1 Protein Homology CDS 53155 53847 . - 0 ID=cds-WP_086163483.1;Parent=gene-D5F92_RS05165;Dbxref=GenBank:WP_086163483.1;Name=WP_086163483.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978607.1;locus_tag=D5F92_RS05165;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_086163483.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 54026 54256 . + . ID=gene-D5F92_RS05170;Name=D5F92_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05170;old_locus_tag=D5F92_05185 NZ_QYTJ01000023.1 Protein Homology CDS 54026 54256 . + 0 ID=cds-WP_000639570.1;Parent=gene-D5F92_RS05170;Dbxref=GenBank:WP_000639570.1;Name=WP_000639570.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639570.1;locus_tag=D5F92_RS05170;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_000639570.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 54310 55989 . + . ID=gene-D5F92_RS05175;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=D5F92_RS05175;old_locus_tag=D5F92_05190 NZ_QYTJ01000023.1 Protein Homology CDS 54310 55989 . + 0 ID=cds-WP_000065493.1;Parent=gene-D5F92_RS05175;Dbxref=GenBank:WP_000065493.1;Name=WP_000065493.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632256.1;locus_tag=D5F92_RS05175;product=ribonuclease J1;protein_id=WP_000065493.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 56151 56660 . - . ID=gene-D5F92_RS05180;Name=D5F92_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05180;old_locus_tag=D5F92_05195 NZ_QYTJ01000023.1 Protein Homology CDS 56151 56660 . - 0 ID=cds-WP_016503198.1;Parent=gene-D5F92_RS05180;Dbxref=GenBank:WP_016503198.1;Name=WP_016503198.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392201.1;locus_tag=D5F92_RS05180;product=CHAP domain-containing protein;protein_id=WP_016503198.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 56808 58154 . - . ID=gene-D5F92_RS05185;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D5F92_RS05185;old_locus_tag=D5F92_05200 NZ_QYTJ01000023.1 Protein Homology CDS 56808 58154 . - 0 ID=cds-WP_016503199.1;Parent=gene-D5F92_RS05185;Dbxref=GenBank:WP_016503199.1;Name=WP_016503199.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997923.1;locus_tag=D5F92_RS05185;product=type I glutamate--ammonia ligase;protein_id=WP_016503199.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 58188 58559 . - . ID=gene-D5F92_RS05190;Name=D5F92_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05190;old_locus_tag=D5F92_05205 NZ_QYTJ01000023.1 Protein Homology CDS 58188 58559 . - 0 ID=cds-WP_000664338.1;Parent=gene-D5F92_RS05190;Dbxref=GenBank:WP_000664338.1;Name=WP_000664338.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768344.1;locus_tag=D5F92_RS05190;product=MerR family transcriptional regulator;protein_id=WP_000664338.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 58639 59178 . - . ID=gene-D5F92_RS05195;Name=D5F92_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05195;old_locus_tag=D5F92_05210 NZ_QYTJ01000023.1 Protein Homology CDS 58639 59178 . - 0 ID=cds-WP_016503200.1;Parent=gene-D5F92_RS05195;Dbxref=GenBank:WP_016503200.1;Name=WP_016503200.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854122.1;locus_tag=D5F92_RS05195;product=FUSC family protein;protein_id=WP_016503200.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 59441 60637 . - . ID=gene-D5F92_RS05200;Name=D5F92_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05200;old_locus_tag=D5F92_05215 NZ_QYTJ01000023.1 Protein Homology CDS 59441 60637 . - 0 ID=cds-WP_001096753.1;Parent=gene-D5F92_RS05200;Dbxref=GenBank:WP_001096753.1;Name=WP_001096753.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=D5F92_RS05200;product=phosphoglycerate kinase;protein_id=WP_001096753.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 60772 61641 . - . ID=gene-D5F92_RS05205;Name=D5F92_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05205;old_locus_tag=D5F92_05220 NZ_QYTJ01000023.1 Protein Homology CDS 60772 61641 . - 0 ID=cds-WP_000858924.1;Parent=gene-D5F92_RS05205;Dbxref=GenBank:WP_000858924.1;Name=WP_000858924.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858925.1;locus_tag=D5F92_RS05205;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_000858924.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 61850 62860 . - . ID=gene-D5F92_RS05210;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=D5F92_RS05210;old_locus_tag=D5F92_05225 NZ_QYTJ01000023.1 Protein Homology CDS 61850 62860 . - 0 ID=cds-WP_000260656.1;Parent=gene-D5F92_RS05210;Dbxref=GenBank:WP_000260656.1;Name=WP_000260656.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=D5F92_RS05210;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000260656.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 63064 65142 . - . ID=gene-D5F92_RS05215;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=D5F92_RS05215;old_locus_tag=D5F92_05230 NZ_QYTJ01000023.1 Protein Homology CDS 63064 65142 . - 0 ID=cds-WP_000090323.1;Parent=gene-D5F92_RS05215;Dbxref=GenBank:WP_000090323.1;Name=WP_000090323.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090325.1;locus_tag=D5F92_RS05215;product=elongation factor G;protein_id=WP_000090323.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 65297 65767 . - . ID=gene-D5F92_RS05220;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=D5F92_RS05220;old_locus_tag=D5F92_05235 NZ_QYTJ01000023.1 Protein Homology CDS 65297 65767 . - 0 ID=cds-WP_000087842.1;Parent=gene-D5F92_RS05220;Dbxref=GenBank:WP_000087842.1;Name=WP_000087842.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=D5F92_RS05220;product=30S ribosomal protein S7;protein_id=WP_000087842.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 65789 66202 . - . ID=gene-D5F92_RS05225;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=D5F92_RS05225;old_locus_tag=D5F92_05240 NZ_QYTJ01000023.1 Protein Homology CDS 65789 66202 . - 0 ID=cds-WP_001142328.1;Parent=gene-D5F92_RS05225;Dbxref=GenBank:WP_001142328.1;Name=WP_001142328.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142328.1;locus_tag=D5F92_RS05225;product=30S ribosomal protein S12;protein_id=WP_001142328.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 66421 67233 . - . ID=gene-D5F92_RS05235;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=D5F92_RS05235;old_locus_tag=D5F92_05250 NZ_QYTJ01000023.1 Protein Homology CDS 66421 67233 . - 0 ID=cds-WP_000776878.1;Parent=gene-D5F92_RS05235;Dbxref=GenBank:WP_000776878.1;Name=WP_000776878.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376136.1;locus_tag=D5F92_RS05235;product=pur operon repressor;protein_id=WP_000776878.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 67330 68271 . - . ID=gene-D5F92_RS05240;Name=D5F92_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05240;old_locus_tag=D5F92_05255 NZ_QYTJ01000023.1 Protein Homology CDS 67330 68271 . - 0 ID=cds-WP_000700694.1;Parent=gene-D5F92_RS05240;Dbxref=GenBank:WP_000700694.1;Name=WP_000700694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771182.1;locus_tag=D5F92_RS05240;product=3'-5' exoribonuclease YhaM family protein;protein_id=WP_000700694.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 68261 69535 . - . ID=gene-D5F92_RS05245;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=D5F92_RS05245;old_locus_tag=D5F92_05260 NZ_QYTJ01000023.1 Protein Homology CDS 68261 69535 . - 0 ID=cds-WP_124749429.1;Parent=gene-D5F92_RS05245;Dbxref=GenBank:WP_124749429.1;Name=WP_124749429.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000960179.1;locus_tag=D5F92_RS05245;product=DNA recombination protein RmuC;protein_id=WP_124749429.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 69537 70169 . - . ID=gene-D5F92_RS05250;Name=D5F92_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05250;old_locus_tag=D5F92_05265 NZ_QYTJ01000023.1 Protein Homology CDS 69537 70169 . - 0 ID=cds-WP_000160925.1;Parent=gene-D5F92_RS05250;Dbxref=GenBank:WP_000160925.1;Name=WP_000160925.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645634.1;locus_tag=D5F92_RS05250;product=thiamine diphosphokinase;protein_id=WP_000160925.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 70162 70824 . - . ID=gene-D5F92_RS05255;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=D5F92_RS05255;old_locus_tag=D5F92_05270 NZ_QYTJ01000023.1 Protein Homology CDS 70162 70824 . - 0 ID=cds-WP_000106178.1;Parent=gene-D5F92_RS05255;Dbxref=GenBank:WP_000106178.1;Name=WP_000106178.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106179.1;locus_tag=D5F92_RS05255;product=ribulose-phosphate 3-epimerase;protein_id=WP_000106178.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 70831 71703 . - . ID=gene-D5F92_RS05260;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=D5F92_RS05260;old_locus_tag=D5F92_05275 NZ_QYTJ01000023.1 Protein Homology CDS 70831 71703 . - 0 ID=cds-WP_016503202.1;Parent=gene-D5F92_RS05260;Dbxref=GenBank:WP_016503202.1;Name=WP_016503202.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768211.1;locus_tag=D5F92_RS05260;product=ribosome small subunit-dependent GTPase A;protein_id=WP_016503202.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 71859 72710 . - . ID=gene-D5F92_RS05265;Name=D5F92_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05265;old_locus_tag=D5F92_05280 NZ_QYTJ01000023.1 Protein Homology CDS 71859 72710 . - 0 ID=cds-WP_000959497.1;Parent=gene-D5F92_RS05265;Dbxref=GenBank:WP_000959497.1;Name=WP_000959497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959505.1;locus_tag=D5F92_RS05265;product=putative RNA methyltransferase;protein_id=WP_000959497.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 72714 73586 . - . ID=gene-D5F92_RS05270;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=D5F92_RS05270;old_locus_tag=D5F92_05285 NZ_QYTJ01000023.1 Protein Homology CDS 72714 73586 . - 0 ID=cds-WP_016503203.1;Parent=gene-D5F92_RS05270;Dbxref=GenBank:WP_016503203.1;Name=WP_016503203.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030634.1;locus_tag=D5F92_RS05270;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_016503203.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 73614 74063 . - . ID=gene-D5F92_RS05275;Name=D5F92_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05275;old_locus_tag=D5F92_05290 NZ_QYTJ01000023.1 Protein Homology CDS 73614 74063 . - 0 ID=cds-WP_016503204.1;Parent=gene-D5F92_RS05275;Dbxref=GenBank:WP_016503204.1;Name=WP_016503204.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280758.1;locus_tag=D5F92_RS05275;product=HIT family protein;protein_id=WP_016503204.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 74067 74633 . - . ID=gene-D5F92_RS05280;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=D5F92_RS05280;old_locus_tag=D5F92_05295 NZ_QYTJ01000023.1 Protein Homology CDS 74067 74633 . - 0 ID=cds-WP_016503205.1;Parent=gene-D5F92_RS05280;Dbxref=GenBank:WP_016503205.1;Name=WP_016503205.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717750.1;locus_tag=D5F92_RS05280;product=ribonuclease M5;protein_id=WP_016503205.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 74620 75402 . - . ID=gene-D5F92_RS05285;Name=D5F92_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05285;old_locus_tag=D5F92_05300 NZ_QYTJ01000023.1 Protein Homology CDS 74620 75402 . - 0 ID=cds-WP_016503206.1;Parent=gene-D5F92_RS05285;Dbxref=GenBank:WP_016503206.1;Name=WP_016503206.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590333.1;locus_tag=D5F92_RS05285;product=TatD family hydrolase;protein_id=WP_016503206.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 75584 75865 . - . ID=gene-D5F92_RS05290;Name=D5F92_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05290;old_locus_tag=D5F92_05305 NZ_QYTJ01000023.1 Protein Homology CDS 75584 75865 . - 0 ID=cds-WP_000055643.1;Parent=gene-D5F92_RS05290;Dbxref=GenBank:WP_000055643.1;Name=WP_000055643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055648.1;locus_tag=D5F92_RS05290;product=hypothetical protein;protein_id=WP_000055643.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 75875 76267 . - . ID=gene-D5F92_RS05295;Name=D5F92_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05295;old_locus_tag=D5F92_05310 NZ_QYTJ01000023.1 Protein Homology CDS 75875 76267 . - 0 ID=cds-WP_124749425.1;Parent=gene-D5F92_RS05295;Dbxref=GenBank:WP_124749425.1;Name=WP_124749425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644028.1;locus_tag=D5F92_RS05295;product=hypothetical protein;protein_id=WP_124749425.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 76258 77550 . - . ID=gene-D5F92_RS05300;Name=D5F92_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05300;old_locus_tag=D5F92_05315 NZ_QYTJ01000023.1 Protein Homology CDS 76258 77550 . - 0 ID=cds-WP_016503212.1;Parent=gene-D5F92_RS05300;Dbxref=GenBank:WP_016503212.1;Name=WP_016503212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647499.1;locus_tag=D5F92_RS05300;product=Mbeg1-like protein;protein_id=WP_016503212.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 77550 77942 . - . ID=gene-D5F92_RS05305;Name=D5F92_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05305;old_locus_tag=D5F92_05320 NZ_QYTJ01000023.1 Protein Homology CDS 77550 77942 . - 0 ID=cds-WP_000835881.1;Parent=gene-D5F92_RS05305;Dbxref=GenBank:WP_000835881.1;Name=WP_000835881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835879.1;locus_tag=D5F92_RS05305;product=DUF1310 domain-containing protein;protein_id=WP_000835881.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 78117 79379 . - . ID=gene-D5F92_RS05310;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=D5F92_RS05310;old_locus_tag=D5F92_05325 NZ_QYTJ01000023.1 Protein Homology CDS 78117 79379 . - 0 ID=cds-WP_016503215.1;Parent=gene-D5F92_RS05310;Dbxref=GenBank:WP_016503215.1;Name=WP_016503215.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503215.1;locus_tag=D5F92_RS05310;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_016503215.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 79372 79611 . - . ID=gene-D5F92_RS05315;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=D5F92_RS05315;old_locus_tag=D5F92_05330 NZ_QYTJ01000023.1 Protein Homology CDS 79372 79611 . - 0 ID=cds-WP_000351975.1;Parent=gene-D5F92_RS05315;Dbxref=GenBank:WP_000351975.1;Name=WP_000351975.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591431.1;locus_tag=D5F92_RS05315;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_000351975.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 79626 80891 . - . ID=gene-D5F92_RS05320;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=D5F92_RS05320;old_locus_tag=D5F92_05335 NZ_QYTJ01000023.1 Protein Homology CDS 79626 80891 . - 0 ID=cds-WP_086163486.1;Parent=gene-D5F92_RS05320;Dbxref=GenBank:WP_086163486.1;Name=WP_086163486.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650936.1;locus_tag=D5F92_RS05320;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_086163486.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 80888 82423 . - . ID=gene-D5F92_RS05325;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=D5F92_RS05325;old_locus_tag=D5F92_05340 NZ_QYTJ01000023.1 Protein Homology CDS 80888 82423 . - 0 ID=cds-WP_000581010.1;Parent=gene-D5F92_RS05325;Dbxref=GenBank:WP_000581010.1;Name=WP_000581010.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581011.1;locus_tag=D5F92_RS05325;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_000581010.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 82436 82558 . - . ID=gene-D5F92_RS05330;Name=D5F92_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05330;old_locus_tag=D5F92_05345 NZ_QYTJ01000023.1 Protein Homology CDS 82436 82558 . - 0 ID=cds-WP_000806141.1;Parent=gene-D5F92_RS05330;Dbxref=GenBank:WP_000806141.1;Name=WP_000806141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806141.1;locus_tag=D5F92_RS05330;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_000806141.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 82569 83756 . - . ID=gene-D5F92_RS05335;Name=dltS;gbkey=Gene;gene=dltS;gene_biotype=protein_coding;locus_tag=D5F92_RS05335;old_locus_tag=D5F92_05350 NZ_QYTJ01000023.1 Protein Homology CDS 82569 83756 . - 0 ID=cds-WP_000490537.1;Parent=gene-D5F92_RS05335;Dbxref=GenBank:WP_000490537.1;Name=WP_000490537.1;gbkey=CDS;gene=dltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490537.1;locus_tag=D5F92_RS05335;product=two-component system sensor histidine kinase DltS;protein_id=WP_000490537.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 83756 84430 . - . ID=gene-D5F92_RS05340;Name=dltR;gbkey=Gene;gene=dltR;gene_biotype=protein_coding;locus_tag=D5F92_RS05340;old_locus_tag=D5F92_05355 NZ_QYTJ01000023.1 Protein Homology CDS 83756 84430 . - 0 ID=cds-WP_016503217.1;Parent=gene-D5F92_RS05340;Dbxref=GenBank:WP_016503217.1;Name=WP_016503217.1;gbkey=CDS;gene=dltR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238594.1;locus_tag=D5F92_RS05340;product=two-component system response regulator DltR;protein_id=WP_016503217.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 84786 84920 . - . ID=gene-D5F92_RS05345;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=D5F92_RS05345;old_locus_tag=D5F92_05360 NZ_QYTJ01000023.1 Protein Homology CDS 84786 84920 . - 0 ID=cds-WP_000831903.1;Parent=gene-D5F92_RS05345;Dbxref=GenBank:WP_000831903.1;Name=WP_000831903.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=D5F92_RS05345;product=50S ribosomal protein L34;protein_id=WP_000831903.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 85104 86459 . - . ID=gene-D5F92_RS05350;Name=D5F92_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05350;old_locus_tag=D5F92_05365 NZ_QYTJ01000023.1 Protein Homology CDS 85104 86459 . - 0 ID=cds-WP_016503218.1;Parent=gene-D5F92_RS05350;Dbxref=GenBank:WP_016503218.1;Name=WP_016503218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647765.1;locus_tag=D5F92_RS05350;product=YjiH family protein;protein_id=WP_016503218.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 86705 88432 . - . ID=gene-D5F92_RS05355;Name=D5F92_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05355;old_locus_tag=D5F92_05370 NZ_QYTJ01000023.1 Protein Homology CDS 86705 88432 . - 0 ID=cds-WP_016503219.1;Parent=gene-D5F92_RS05355;Dbxref=GenBank:WP_016503219.1;Name=WP_016503219.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429367.1;locus_tag=D5F92_RS05355;product=ABC transporter permease/substrate binding protein;protein_id=WP_016503219.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 88451 89674 . - . ID=gene-D5F92_RS05360;Name=D5F92_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05360;old_locus_tag=D5F92_05375 NZ_QYTJ01000023.1 Protein Homology CDS 88451 89674 . - 0 ID=cds-WP_000181804.1;Parent=gene-D5F92_RS05360;Dbxref=GenBank:WP_000181804.1;Name=WP_000181804.1;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647591.1;locus_tag=D5F92_RS05360;product=quaternary amine ABC transporter ATP-binding protein;protein_id=WP_000181804.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 90051 92429 . - . ID=gene-D5F92_RS05370;Name=D5F92_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05370;old_locus_tag=D5F92_05385 NZ_QYTJ01000023.1 Protein Homology CDS 90051 92429 . - 0 ID=cds-WP_086163487.1;Parent=gene-D5F92_RS05370;Dbxref=GenBank:WP_086163487.1;Name=WP_086163487.1;Ontology_term=GO:0005975,GO:0016832,GO:0030976;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288401.1;locus_tag=D5F92_RS05370;product=phosphoketolase family protein;protein_id=WP_086163487.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 92519 93610 . - . ID=gene-D5F92_RS05375;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=D5F92_RS05375;old_locus_tag=D5F92_05390 NZ_QYTJ01000023.1 Protein Homology CDS 92519 93610 . - 0 ID=cds-WP_001134214.1;Parent=gene-D5F92_RS05375;Dbxref=GenBank:WP_001134214.1;Name=WP_001134214.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863918.1;locus_tag=D5F92_RS05375;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001134214.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 93927 95606 . - . ID=gene-D5F92_RS05380;Name=D5F92_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05380;old_locus_tag=D5F92_05395 NZ_QYTJ01000023.1 Protein Homology CDS 93927 95606 . - 0 ID=cds-WP_016503222.1;Parent=gene-D5F92_RS05380;Dbxref=GenBank:WP_016503222.1;Name=WP_016503222.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584682.1;locus_tag=D5F92_RS05380;product=BglG family transcription antiterminator;protein_id=WP_016503222.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 95672 96418 . - . ID=gene-D5F92_RS05385;Name=D5F92_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05385;old_locus_tag=D5F92_05400 NZ_QYTJ01000023.1 Protein Homology CDS 95672 96418 . - 0 ID=cds-WP_124749419.1;Parent=gene-D5F92_RS05385;Dbxref=GenBank:WP_124749419.1;Name=WP_124749419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806825.1;locus_tag=D5F92_RS05385;product=AP endonuclease;protein_id=WP_124749419.1;transl_table=11 NZ_QYTJ01000023.1 RefSeq gene 96423 97286 . - . ID=gene-D5F92_RS05390;Name=D5F92_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05390;old_locus_tag=D5F92_05405 NZ_QYTJ01000023.1 Protein Homology CDS 96423 97286 . - 0 ID=cds-WP_124749324.1;Parent=gene-D5F92_RS05390;Dbxref=GenBank:WP_124749324.1;Name=WP_124749324.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS05390;product=IS982 family transposase;protein_id=WP_124749324.1;transl_table=11 ##sequence-region NZ_QYTJ01000024.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000024.1 RefSeq region 1 792 . + . ID=NZ_QYTJ01000024.1:1..792;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000024.1 RefSeq pseudogene 1 302 . + . ID=gene-D5F92_RS05395;Name=D5F92_RS05395;end_range=302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS05395;old_locus_tag=D5F92_05410;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000024.1 Protein Homology CDS 1 302 . + 0 ID=cds-D5F92_RS05395;Parent=gene-D5F92_RS05395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447421.1;locus_tag=D5F92_RS05395;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000024.1 RefSeq gene 339 792 . - . ID=gene-D5F92_RS05400;Name=D5F92_RS05400;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05400;old_locus_tag=D5F92_05415;partial=true NZ_QYTJ01000024.1 Protein Homology CDS 339 792 . - 1 ID=cds-WP_124785482.1;Parent=gene-D5F92_RS05400;Dbxref=GenBank:WP_124785482.1;Name=WP_124785482.1;Ontology_term=GO:0004803;end_range=792,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS05400;partial=true;product=IS3 family transposase;protein_id=WP_124785482.1;transl_table=11 ##sequence-region NZ_QYTJ01000025.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000025.1 RefSeq region 1 1335 . + . ID=NZ_QYTJ01000025.1:1..1335;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000025.1 RefSeq gene 1 1335 . - . ID=gene-D5F92_RS11325;Name=D5F92_RS11325;end_range=1335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11325;partial=true;start_range=.,1 NZ_QYTJ01000025.1 GeneMarkS-2+ CDS 1 1335 . - 2 ID=cds-WP_311766401.1;Parent=gene-D5F92_RS11325;Dbxref=GenBank:WP_311766401.1;Name=WP_311766401.1;end_range=1335,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS11325;partial=true;product=hypothetical protein;protein_id=WP_311766401.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QYTJ01000026.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000026.1 RefSeq region 1 1448 . + . ID=NZ_QYTJ01000026.1:1..1448;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000026.1 RefSeq pseudogene 1 585 . + . ID=gene-D5F92_RS05410;Name=D5F92_RS05410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS05410;old_locus_tag=D5F92_05425;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000026.1 Protein Homology CDS 1 585 . + 2 ID=cds-D5F92_RS05410;Parent=gene-D5F92_RS05410;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057434.1;locus_tag=D5F92_RS05410;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000026.1 RefSeq gene 811 996 . + . ID=gene-D5F92_RS05420;Name=D5F92_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05420;old_locus_tag=D5F92_05435 NZ_QYTJ01000026.1 Protein Homology CDS 811 996 . + 0 ID=cds-WP_372538331.1;Parent=gene-D5F92_RS05420;Dbxref=GenBank:WP_372538331.1;Name=WP_372538331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021071.6;locus_tag=D5F92_RS05420;product=conserved phage C-terminal domain-containing protein;protein_id=WP_372538331.1;transl_table=11 NZ_QYTJ01000026.1 RefSeq gene 977 1126 . + . ID=gene-D5F92_RS11330;Name=D5F92_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11330 NZ_QYTJ01000026.1 GeneMarkS-2+ CDS 977 1126 . + 0 ID=cds-WP_180383444.1;Parent=gene-D5F92_RS11330;Dbxref=GenBank:WP_180383444.1;Name=WP_180383444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS11330;product=hypothetical protein;protein_id=WP_180383444.1;transl_table=11 NZ_QYTJ01000026.1 RefSeq gene 1140 1448 . - . ID=gene-D5F92_RS05425;Name=D5F92_RS05425;end_range=1448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05425;old_locus_tag=D5F92_05440;partial=true NZ_QYTJ01000026.1 Protein Homology CDS 1140 1448 . - 0 ID=cds-WP_142996889.1;Parent=gene-D5F92_RS05425;Dbxref=GenBank:WP_142996889.1;Name=WP_142996889.1;Ontology_term=GO:0015074;end_range=1448,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS05425;partial=true;product=integrase core domain-containing protein;protein_id=WP_142996889.1;transl_table=11 ##sequence-region NZ_QYTJ01000027.1 1 82884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000027.1 RefSeq region 1 82884 . + . ID=NZ_QYTJ01000027.1:1..82884;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000027.1 RefSeq gene 142 759 . - . ID=gene-D5F92_RS05430;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=D5F92_RS05430;old_locus_tag=D5F92_05445 NZ_QYTJ01000027.1 Protein Homology CDS 142 759 . - 0 ID=cds-WP_001287939.1;Parent=gene-D5F92_RS05430;Dbxref=GenBank:WP_001287939.1;Name=WP_001287939.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287938.1;locus_tag=D5F92_RS05430;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_001287939.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 832 1323 . - . ID=gene-D5F92_RS05435;Name=D5F92_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05435;old_locus_tag=D5F92_05450 NZ_QYTJ01000027.1 Protein Homology CDS 832 1323 . - 0 ID=cds-WP_000776873.1;Parent=gene-D5F92_RS05435;Dbxref=GenBank:WP_000776873.1;Name=WP_000776873.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776873.1;locus_tag=D5F92_RS05435;product=GNAT family N-acetyltransferase;protein_id=WP_000776873.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 1332 2264 . - . ID=gene-D5F92_RS05440;Name=D5F92_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05440;old_locus_tag=D5F92_05455 NZ_QYTJ01000027.1 Protein Homology CDS 1332 2264 . - 0 ID=cds-WP_016503340.1;Parent=gene-D5F92_RS05440;Dbxref=GenBank:WP_016503340.1;Name=WP_016503340.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644670.1;locus_tag=D5F92_RS05440;product=Gfo/Idh/MocA family protein;protein_id=WP_016503340.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 2277 2420 . - . ID=gene-D5F92_RS05445;Name=D5F92_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05445;old_locus_tag=D5F92_05460 NZ_QYTJ01000027.1 Protein Homology CDS 2277 2420 . - 0 ID=cds-WP_000521645.1;Parent=gene-D5F92_RS05445;Dbxref=GenBank:WP_000521645.1;Name=WP_000521645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521646.1;locus_tag=D5F92_RS05445;product=hypothetical protein;protein_id=WP_000521645.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 2495 4693 . - . ID=gene-D5F92_RS05450;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=D5F92_RS05450;old_locus_tag=D5F92_05465 NZ_QYTJ01000027.1 Protein Homology CDS 2495 4693 . - 0 ID=cds-WP_000989502.1;Parent=gene-D5F92_RS05450;Dbxref=GenBank:WP_000989502.1;Name=WP_000989502.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481337.1;locus_tag=D5F92_RS05450;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000989502.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 4792 6333 . - . ID=gene-D5F92_RS05455;Name=D5F92_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05455;old_locus_tag=D5F92_05470 NZ_QYTJ01000027.1 Protein Homology CDS 4792 6333 . - 0 ID=cds-WP_016503341.1;Parent=gene-D5F92_RS05455;Dbxref=GenBank:WP_016503341.1;Name=WP_016503341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230047.1;locus_tag=D5F92_RS05455;product=Competence-induced protein Ccs4;protein_id=WP_016503341.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 6379 6501 . - . ID=gene-D5F92_RS11405;Name=D5F92_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11405;old_locus_tag=D5F92_05475 NZ_QYTJ01000027.1 Protein Homology CDS 6379 6501 . - 0 ID=cds-WP_001285712.1;Parent=gene-D5F92_RS11405;Dbxref=GenBank:WP_001285712.1;Name=WP_001285712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285712.1;locus_tag=D5F92_RS11405;product=hypothetical protein;protein_id=WP_001285712.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 6582 6899 . - . ID=gene-D5F92_RS05465;Name=D5F92_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05465;old_locus_tag=D5F92_05480 NZ_QYTJ01000027.1 Protein Homology CDS 6582 6899 . - 0 ID=cds-WP_000940932.1;Parent=gene-D5F92_RS05465;Dbxref=GenBank:WP_000940932.1;Name=WP_000940932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912065.1;locus_tag=D5F92_RS05465;product=DUF1292 domain-containing protein;protein_id=WP_000940932.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 6925 7344 . - . ID=gene-D5F92_RS05470;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=D5F92_RS05470;old_locus_tag=D5F92_05485 NZ_QYTJ01000027.1 Protein Homology CDS 6925 7344 . - 0 ID=cds-WP_001222109.1;Parent=gene-D5F92_RS05470;Dbxref=GenBank:WP_001222109.1;Name=WP_001222109.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090938.1;locus_tag=D5F92_RS05470;product=Holliday junction resolvase RuvX;protein_id=WP_001222109.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 7344 7610 . - . ID=gene-D5F92_RS05475;Name=D5F92_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05475;old_locus_tag=D5F92_05490 NZ_QYTJ01000027.1 Protein Homology CDS 7344 7610 . - 0 ID=cds-WP_000507056.1;Parent=gene-D5F92_RS05475;Dbxref=GenBank:WP_000507056.1;Name=WP_000507056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738453.1;locus_tag=D5F92_RS05475;product=IreB family regulatory phosphoprotein;protein_id=WP_000507056.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 7812 8210 . - . ID=gene-D5F92_RS05480;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=D5F92_RS05480;old_locus_tag=D5F92_05495 NZ_QYTJ01000027.1 Protein Homology CDS 7812 8210 . - 0 ID=cds-WP_000591161.1;Parent=gene-D5F92_RS05480;Dbxref=GenBank:WP_000591161.1;Name=WP_000591161.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768833.1;locus_tag=D5F92_RS05480;product=transcriptional regulator Spx;protein_id=WP_000591161.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 8426 9565 . - . ID=gene-D5F92_RS05485;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=D5F92_RS05485;old_locus_tag=D5F92_05500 NZ_QYTJ01000027.1 Protein Homology CDS 8426 9565 . - 0 ID=cds-WP_124749334.1;Parent=gene-D5F92_RS05485;Dbxref=GenBank:WP_124749334.1;Name=WP_124749334.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085741.1;locus_tag=D5F92_RS05485;product=recombinase RecA;protein_id=WP_124749334.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 9639 10898 . - . ID=gene-D5F92_RS05490;Name=D5F92_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05490;old_locus_tag=D5F92_05505 NZ_QYTJ01000027.1 Protein Homology CDS 9639 10898 . - 0 ID=cds-WP_016503342.1;Parent=gene-D5F92_RS05490;Dbxref=GenBank:WP_016503342.1;Name=WP_016503342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503342.1;locus_tag=D5F92_RS05490;product=competence/damage-inducible protein A;protein_id=WP_016503342.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 10987 11538 . - . ID=gene-D5F92_RS05495;Name=D5F92_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05495;old_locus_tag=D5F92_05510 NZ_QYTJ01000027.1 Protein Homology CDS 10987 11538 . - 0 ID=cds-WP_016503343.1;Parent=gene-D5F92_RS05495;Dbxref=GenBank:WP_016503343.1;Name=WP_016503343.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632344.1;locus_tag=D5F92_RS05495;product=DNA-3-methyladenine glycosylase I;protein_id=WP_016503343.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 11561 12151 . - . ID=gene-D5F92_RS05500;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=D5F92_RS05500;old_locus_tag=D5F92_05515 NZ_QYTJ01000027.1 Protein Homology CDS 11561 12151 . - 0 ID=cds-WP_000272490.1;Parent=gene-D5F92_RS05500;Dbxref=GenBank:WP_000272490.1;Name=WP_000272490.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768484.1;locus_tag=D5F92_RS05500;product=Holliday junction branch migration protein RuvA;protein_id=WP_000272490.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 12153 13385 . - . ID=gene-D5F92_RS05505;Name=D5F92_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05505;old_locus_tag=D5F92_05520 NZ_QYTJ01000027.1 Protein Homology CDS 12153 13385 . - 0 ID=cds-WP_000657472.1;Parent=gene-D5F92_RS05505;Dbxref=GenBank:WP_000657472.1;Name=WP_000657472.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657477.1;locus_tag=D5F92_RS05505;product=MDR family MFS transporter;protein_id=WP_000657472.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 13417 15390 . - . ID=gene-D5F92_RS05510;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=D5F92_RS05510;old_locus_tag=D5F92_05525 NZ_QYTJ01000027.1 Protein Homology CDS 13417 15390 . - 0 ID=cds-WP_180383579.1;Parent=gene-D5F92_RS05510;Dbxref=GenBank:WP_180383579.1;Name=WP_180383579.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262396.1;locus_tag=D5F92_RS05510;product=DNA mismatch repair endonuclease MutL;protein_id=WP_180383579.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 15616 15819 . + . ID=gene-D5F92_RS05520;Name=D5F92_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05520;old_locus_tag=D5F92_05535 NZ_QYTJ01000027.1 Protein Homology CDS 15616 15819 . + 0 ID=cds-WP_000191849.1;Parent=gene-D5F92_RS05520;Dbxref=GenBank:WP_000191849.1;Name=WP_000191849.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191849.1;locus_tag=D5F92_RS05520;product=cold-shock protein;protein_id=WP_000191849.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 15876 18452 . - . ID=gene-D5F92_RS05525;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=D5F92_RS05525;old_locus_tag=D5F92_05540 NZ_QYTJ01000027.1 Protein Homology CDS 15876 18452 . - 0 ID=cds-WP_124749335.1;Parent=gene-D5F92_RS05525;Dbxref=GenBank:WP_124749335.1;Name=WP_124749335.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649199.1;locus_tag=D5F92_RS05525;product=DNA mismatch repair protein MutS;protein_id=WP_124749335.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 18509 18946 . - . ID=gene-D5F92_RS05530;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=D5F92_RS05530;old_locus_tag=D5F92_05545 NZ_QYTJ01000027.1 Protein Homology CDS 18509 18946 . - 0 ID=cds-WP_001033152.1;Parent=gene-D5F92_RS05530;Dbxref=GenBank:WP_001033152.1;Name=WP_001033152.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058838.1;locus_tag=D5F92_RS05530;product=arginine repressor;protein_id=WP_001033152.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 19168 20859 . + . ID=gene-D5F92_RS05535;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=D5F92_RS05535;old_locus_tag=D5F92_05550 NZ_QYTJ01000027.1 Protein Homology CDS 19168 20859 . + 0 ID=cds-WP_000379864.1;Parent=gene-D5F92_RS05535;Dbxref=GenBank:WP_000379864.1;Name=WP_000379864.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632348.1;locus_tag=D5F92_RS05535;product=arginine--tRNA ligase;protein_id=WP_000379864.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 20947 21255 . + . ID=gene-D5F92_RS05540;Name=D5F92_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05540;old_locus_tag=D5F92_05555 NZ_QYTJ01000027.1 Protein Homology CDS 20947 21255 . + 0 ID=cds-WP_001138859.1;Parent=gene-D5F92_RS05540;Dbxref=GenBank:WP_001138859.1;Name=WP_001138859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889238.1;locus_tag=D5F92_RS05540;product=bacteriocin immunity protein;protein_id=WP_001138859.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 21282 22154 . - . ID=gene-D5F92_RS05545;Name=D5F92_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05545;old_locus_tag=D5F92_05560 NZ_QYTJ01000027.1 Protein Homology CDS 21282 22154 . - 0 ID=cds-WP_000915478.1;Parent=gene-D5F92_RS05545;Dbxref=GenBank:WP_000915478.1;Name=WP_000915478.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481344.1;locus_tag=D5F92_RS05545;product=YitT family protein;protein_id=WP_000915478.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 22262 23206 . - . ID=gene-D5F92_RS05550;Name=D5F92_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05550;old_locus_tag=D5F92_05565 NZ_QYTJ01000027.1 Protein Homology CDS 22262 23206 . - 0 ID=cds-WP_000857770.1;Parent=gene-D5F92_RS05550;Dbxref=GenBank:WP_000857770.1;Name=WP_000857770.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646408.1;locus_tag=D5F92_RS05550;product=YitT family protein;protein_id=WP_000857770.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 23196 24947 . - . ID=gene-D5F92_RS05555;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=D5F92_RS05555;old_locus_tag=D5F92_05570 NZ_QYTJ01000027.1 Protein Homology CDS 23196 24947 . - 0 ID=cds-WP_000830938.1;Parent=gene-D5F92_RS05555;Dbxref=GenBank:WP_000830938.1;Name=WP_000830938.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830932.1;locus_tag=D5F92_RS05555;product=aspartate--tRNA ligase;protein_id=WP_000830938.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 25040 26320 . - . ID=gene-D5F92_RS05560;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=D5F92_RS05560;old_locus_tag=D5F92_05575 NZ_QYTJ01000027.1 Protein Homology CDS 25040 26320 . - 0 ID=cds-WP_000775906.1;Parent=gene-D5F92_RS05560;Dbxref=GenBank:WP_000775906.1;Name=WP_000775906.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775906.1;locus_tag=D5F92_RS05560;product=histidine--tRNA ligase;protein_id=WP_000775906.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 26540 26722 . + . ID=gene-D5F92_RS05565;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=D5F92_RS05565;old_locus_tag=D5F92_05580 NZ_QYTJ01000027.1 Protein Homology CDS 26540 26722 . + 0 ID=cds-WP_000290414.1;Parent=gene-D5F92_RS05565;Dbxref=GenBank:WP_000290414.1;Name=WP_000290414.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380522.1;locus_tag=D5F92_RS05565;product=50S ribosomal protein L32;protein_id=WP_000290414.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 26738 26887 . + . ID=gene-D5F92_RS05570;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F92_RS05570;old_locus_tag=D5F92_05585 NZ_QYTJ01000027.1 Protein Homology CDS 26738 26887 . + 0 ID=cds-WP_001265622.1;Parent=gene-D5F92_RS05570;Dbxref=GenBank:WP_001265622.1;Name=WP_001265622.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=D5F92_RS05570;product=50S ribosomal protein L33;protein_id=WP_001265622.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 27134 27805 . + . ID=gene-D5F92_RS05575;Name=D5F92_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05575;old_locus_tag=D5F92_05590 NZ_QYTJ01000027.1 Protein Homology CDS 27134 27805 . + 0 ID=cds-WP_016481351.1;Parent=gene-D5F92_RS05575;Dbxref=GenBank:WP_016481351.1;Name=WP_016481351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186297.1;locus_tag=D5F92_RS05575;product=PepSY domain-containing protein;protein_id=WP_016481351.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 27890 28561 . + . ID=gene-D5F92_RS05580;Name=D5F92_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05580;old_locus_tag=D5F92_05595 NZ_QYTJ01000027.1 Protein Homology CDS 27890 28561 . + 0 ID=cds-WP_000699615.1;Parent=gene-D5F92_RS05580;Dbxref=GenBank:WP_000699615.1;Name=WP_000699615.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643515.1;locus_tag=D5F92_RS05580;product=response regulator transcription factor;protein_id=WP_000699615.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 28545 29909 . + . ID=gene-D5F92_RS05585;Name=D5F92_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05585;old_locus_tag=D5F92_05600 NZ_QYTJ01000027.1 Protein Homology CDS 28545 29909 . + 0 ID=cds-WP_000898849.1;Parent=gene-D5F92_RS05585;Dbxref=GenBank:WP_000898849.1;Name=WP_000898849.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000898851.1;locus_tag=D5F92_RS05585;product=sensor histidine kinase;protein_id=WP_000898849.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 30017 31570 . - . ID=gene-D5F92_RS05590;Name=D5F92_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05590;old_locus_tag=D5F92_05605 NZ_QYTJ01000027.1 Protein Homology CDS 30017 31570 . - 0 ID=cds-WP_016503348.1;Parent=gene-D5F92_RS05590;Dbxref=GenBank:WP_016503348.1;Name=WP_016503348.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114291.1;locus_tag=D5F92_RS05590;product=YfcC family protein;protein_id=WP_016503348.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 31664 32590 . - . ID=gene-D5F92_RS05595;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=D5F92_RS05595;old_locus_tag=D5F92_05610 NZ_QYTJ01000027.1 Protein Homology CDS 31664 32590 . - 0 ID=cds-WP_016503349.1;Parent=gene-D5F92_RS05595;Dbxref=GenBank:WP_016503349.1;Name=WP_016503349.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503349.1;locus_tag=D5F92_RS05595;product=carbamate kinase;protein_id=WP_016503349.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 32602 33600 . - . ID=gene-D5F92_RS05600;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D5F92_RS05600;old_locus_tag=D5F92_05615 NZ_QYTJ01000027.1 Protein Homology CDS 32602 33600 . - 0 ID=cds-WP_000793624.1;Parent=gene-D5F92_RS05600;Dbxref=GenBank:WP_000793624.1;Name=WP_000793624.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045350.1;locus_tag=D5F92_RS05600;product=ornithine carbamoyltransferase;protein_id=WP_000793624.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 33703 34998 . + . ID=gene-D5F92_RS05605;Name=D5F92_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05605;old_locus_tag=D5F92_05620 NZ_QYTJ01000027.1 Protein Homology CDS 33703 34998 . + 0 ID=cds-WP_000884296.1;Parent=gene-D5F92_RS05605;Dbxref=GenBank:WP_000884296.1;Name=WP_000884296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884289.1;locus_tag=D5F92_RS05605;product=ATP-binding protein;protein_id=WP_000884296.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 34995 35828 . + . ID=gene-D5F92_RS05610;Name=D5F92_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05610;old_locus_tag=D5F92_05625 NZ_QYTJ01000027.1 Protein Homology CDS 34995 35828 . + 0 ID=cds-WP_000675242.1;Parent=gene-D5F92_RS05610;Dbxref=GenBank:WP_000675242.1;Name=WP_000675242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675243.1;locus_tag=D5F92_RS05610;product=DNA-binding domain-containing protein;protein_id=WP_000675242.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 36050 36772 . + . ID=gene-D5F92_RS05615;Name=D5F92_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05615;old_locus_tag=D5F92_05630 NZ_QYTJ01000027.1 Protein Homology CDS 36050 36772 . + 0 ID=cds-WP_000622721.1;Parent=gene-D5F92_RS05615;Dbxref=GenBank:WP_000622721.1;Name=WP_000622721.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767600.1;locus_tag=D5F92_RS05615;product=ABC transporter ATP-binding protein;protein_id=WP_000622721.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 36775 38289 . + . ID=gene-D5F92_RS05620;Name=D5F92_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05620;old_locus_tag=D5F92_05635 NZ_QYTJ01000027.1 Protein Homology CDS 36775 38289 . + 0 ID=cds-WP_016503350.1;Parent=gene-D5F92_RS05620;Dbxref=GenBank:WP_016503350.1;Name=WP_016503350.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019319700.1;locus_tag=D5F92_RS05620;product=ABC transporter permease/substrate-binding protein;protein_id=WP_016503350.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 38368 40908 . - . ID=gene-D5F92_RS05625;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=D5F92_RS05625;old_locus_tag=D5F92_05640 NZ_QYTJ01000027.1 Protein Homology CDS 38368 40908 . - 0 ID=cds-WP_185690643.1;Parent=gene-D5F92_RS05625;Dbxref=GenBank:WP_185690643.1;Name=WP_185690643.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733247.1;locus_tag=D5F92_RS05625;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_185690643.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 40892 41635 . - . ID=gene-D5F92_RS05630;Name=D5F92_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05630;old_locus_tag=D5F92_05645 NZ_QYTJ01000027.1 Protein Homology CDS 40892 41635 . - 0 ID=cds-WP_000138567.1;Parent=gene-D5F92_RS05630;Dbxref=GenBank:WP_000138567.1;Name=WP_000138567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138569.1;locus_tag=D5F92_RS05630;product=alpha/beta fold hydrolase;protein_id=WP_000138567.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 41769 42125 . - . ID=gene-D5F92_RS05635;Name=D5F92_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05635;old_locus_tag=D5F92_05650 NZ_QYTJ01000027.1 Protein Homology CDS 41769 42125 . - 0 ID=cds-WP_000105931.1;Parent=gene-D5F92_RS05635;Dbxref=GenBank:WP_000105931.1;Name=WP_000105931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105940.1;locus_tag=D5F92_RS05635;product=DUF1304 domain-containing protein;protein_id=WP_000105931.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 42192 44510 . - . ID=gene-D5F92_RS05640;Name=D5F92_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05640;old_locus_tag=D5F92_05655 NZ_QYTJ01000027.1 Protein Homology CDS 42192 44510 . - 0 ID=cds-WP_016503353.1;Parent=gene-D5F92_RS05640;Dbxref=GenBank:WP_016503353.1;Name=WP_016503353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883428.1;locus_tag=D5F92_RS05640;product=YhgE/Pip domain-containing protein;protein_id=WP_016503353.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 44649 45188 . + . ID=gene-D5F92_RS05645;Name=D5F92_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05645;old_locus_tag=D5F92_05660 NZ_QYTJ01000027.1 Protein Homology CDS 44649 45188 . + 0 ID=cds-WP_000245863.1;Parent=gene-D5F92_RS05645;Dbxref=GenBank:WP_000245863.1;Name=WP_000245863.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771890.1;locus_tag=D5F92_RS05645;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000245863.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 45274 45570 . - . ID=gene-D5F92_RS05650;Name=D5F92_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05650;old_locus_tag=D5F92_05665 NZ_QYTJ01000027.1 Protein Homology CDS 45274 45570 . - 0 ID=cds-WP_016481360.1;Parent=gene-D5F92_RS05650;Dbxref=GenBank:WP_016481360.1;Name=WP_016481360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052252.1;locus_tag=D5F92_RS05650;product=DUF4298 domain-containing protein;protein_id=WP_016481360.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 45813 46424 . - . ID=gene-D5F92_RS05655;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=D5F92_RS05655;old_locus_tag=D5F92_05670 NZ_QYTJ01000027.1 Protein Homology CDS 45813 46424 . - 0 ID=cds-WP_000092759.1;Parent=gene-D5F92_RS05655;Dbxref=GenBank:WP_000092759.1;Name=WP_000092759.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=D5F92_RS05655;product=30S ribosomal protein S4;protein_id=WP_000092759.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 46754 47041 . - . ID=gene-D5F92_RS05660;Name=D5F92_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05660;old_locus_tag=D5F92_05675 NZ_QYTJ01000027.1 Protein Homology CDS 46754 47041 . - 0 ID=cds-WP_001278152.1;Parent=gene-D5F92_RS05660;Dbxref=GenBank:WP_001278152.1;Name=WP_001278152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278154.1;locus_tag=D5F92_RS05660;product=Veg family protein;protein_id=WP_001278152.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 47053 48408 . - . ID=gene-D5F92_RS05665;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=D5F92_RS05665;old_locus_tag=D5F92_05680 NZ_QYTJ01000027.1 Protein Homology CDS 47053 48408 . - 0 ID=cds-WP_000852645.1;Parent=gene-D5F92_RS05665;Dbxref=GenBank:WP_000852645.1;Name=WP_000852645.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852642.1;locus_tag=D5F92_RS05665;product=replicative DNA helicase;protein_id=WP_000852645.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 48451 48903 . - . ID=gene-D5F92_RS05670;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=D5F92_RS05670;old_locus_tag=D5F92_05685 NZ_QYTJ01000027.1 Protein Homology CDS 48451 48903 . - 0 ID=cds-WP_000864243.1;Parent=gene-D5F92_RS05670;Dbxref=GenBank:WP_000864243.1;Name=WP_000864243.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864242.1;locus_tag=D5F92_RS05670;product=50S ribosomal protein L9;protein_id=WP_000864243.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 48909 50891 . - . ID=gene-D5F92_RS05675;Name=D5F92_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05675;old_locus_tag=D5F92_05690 NZ_QYTJ01000027.1 Protein Homology CDS 48909 50891 . - 0 ID=cds-WP_000819774.1;Parent=gene-D5F92_RS05675;Dbxref=GenBank:WP_000819774.1;Name=WP_000819774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819774.1;locus_tag=D5F92_RS05675;product=DHH family phosphoesterase;protein_id=WP_000819774.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 50958 52859 . - . ID=gene-D5F92_RS05680;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=D5F92_RS05680;old_locus_tag=D5F92_05695 NZ_QYTJ01000027.1 Protein Homology CDS 50958 52859 . - 0 ID=cds-WP_016503354.1;Parent=gene-D5F92_RS05680;Dbxref=GenBank:WP_016503354.1;Name=WP_016503354.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481387.1;locus_tag=D5F92_RS05680;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_016503354.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 53029 53640 . - . ID=gene-D5F92_RS05685;Name=D5F92_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05685;old_locus_tag=D5F92_05700 NZ_QYTJ01000027.1 Protein Homology CDS 53029 53640 . - 0 ID=cds-WP_000623752.1;Parent=gene-D5F92_RS05685;Dbxref=GenBank:WP_000623752.1;Name=WP_000623752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623753.1;locus_tag=D5F92_RS05685;product=MarC family protein;protein_id=WP_000623752.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 53672 54793 . - . ID=gene-D5F92_RS05690;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=D5F92_RS05690;old_locus_tag=D5F92_05705 NZ_QYTJ01000027.1 Protein Homology CDS 53672 54793 . - 0 ID=cds-WP_000131749.1;Parent=gene-D5F92_RS05690;Dbxref=GenBank:WP_000131749.1;Name=WP_000131749.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535986.1;locus_tag=D5F92_RS05690;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000131749.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 55040 55708 . + . ID=gene-D5F92_RS05695;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=D5F92_RS05695;old_locus_tag=D5F92_05710 NZ_QYTJ01000027.1 Protein Homology CDS 55040 55708 . + 0 ID=cds-WP_000681579.1;Parent=gene-D5F92_RS05695;Dbxref=GenBank:WP_000681579.1;Name=WP_000681579.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681580.1;locus_tag=D5F92_RS05695;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_000681579.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 55723 56595 . + . ID=gene-D5F92_RS05700;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=D5F92_RS05700;old_locus_tag=D5F92_05715 NZ_QYTJ01000027.1 Protein Homology CDS 55723 56595 . + 0 ID=cds-WP_124749337.1;Parent=gene-D5F92_RS05700;Dbxref=GenBank:WP_124749337.1;Name=WP_124749337.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500148.1;locus_tag=D5F92_RS05700;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_124749337.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 56730 57434 . - . ID=gene-D5F92_RS05705;Name=D5F92_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05705;old_locus_tag=D5F92_05720 NZ_QYTJ01000027.1 Protein Homology CDS 56730 57434 . - 0 ID=cds-WP_001042660.1;Parent=gene-D5F92_RS05705;Dbxref=GenBank:WP_001042660.1;Name=WP_001042660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042662.1;locus_tag=D5F92_RS05705;product=transglycosylase SLT domain-containing protein;protein_id=WP_001042660.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 57540 58079 . - . ID=gene-D5F92_RS05710;Name=apf;gbkey=Gene;gene=apf;gene_biotype=protein_coding;locus_tag=D5F92_RS05710;old_locus_tag=D5F92_05725 NZ_QYTJ01000027.1 Protein Homology CDS 57540 58079 . - 0 ID=cds-WP_000029067.1;Parent=gene-D5F92_RS05710;Dbxref=GenBank:WP_000029067.1;Name=WP_000029067.1;gbkey=CDS;gene=apf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029072.1;locus_tag=D5F92_RS05710;product=aggregation-promoting factor;protein_id=WP_000029067.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 58295 59089 . - . ID=gene-D5F92_RS05715;Name=D5F92_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05715;old_locus_tag=D5F92_05730 NZ_QYTJ01000027.1 Protein Homology CDS 58295 59089 . - 0 ID=cds-WP_016503356.1;Parent=gene-D5F92_RS05715;Dbxref=GenBank:WP_016503356.1;Name=WP_016503356.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359357.1;locus_tag=D5F92_RS05715;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_016503356.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 59082 59924 . - . ID=gene-D5F92_RS05720;Name=D5F92_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05720;old_locus_tag=D5F92_05735 NZ_QYTJ01000027.1 Protein Homology CDS 59082 59924 . - 0 ID=cds-WP_000510606.1;Parent=gene-D5F92_RS05720;Dbxref=GenBank:WP_000510606.1;Name=WP_000510606.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510607.1;locus_tag=D5F92_RS05720;product=energy-coupling factor transporter ATPase;protein_id=WP_000510606.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 59900 60739 . - . ID=gene-D5F92_RS05725;Name=D5F92_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05725;old_locus_tag=D5F92_05740 NZ_QYTJ01000027.1 Protein Homology CDS 59900 60739 . - 0 ID=cds-WP_000181757.1;Parent=gene-D5F92_RS05725;Dbxref=GenBank:WP_000181757.1;Name=WP_000181757.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181759.1;locus_tag=D5F92_RS05725;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000181757.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 60739 61281 . - . ID=gene-D5F92_RS05730;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=D5F92_RS05730;old_locus_tag=D5F92_05745 NZ_QYTJ01000027.1 Protein Homology CDS 60739 61281 . - 0 ID=cds-WP_000239224.1;Parent=gene-D5F92_RS05730;Dbxref=GenBank:WP_000239224.1;Name=WP_000239224.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090075.1;locus_tag=D5F92_RS05730;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_000239224.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 61404 62687 . - . ID=gene-D5F92_RS05735;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=D5F92_RS05735;old_locus_tag=D5F92_05750 NZ_QYTJ01000027.1 Protein Homology CDS 61404 62687 . - 0 ID=cds-WP_000217765.1;Parent=gene-D5F92_RS05735;Dbxref=GenBank:WP_000217765.1;Name=WP_000217765.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000217763.1;locus_tag=D5F92_RS05735;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_000217765.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 62689 63933 . - . ID=gene-D5F92_RS05740;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=D5F92_RS05740;old_locus_tag=D5F92_05755 NZ_QYTJ01000027.1 Protein Homology CDS 62689 63933 . - 0 ID=cds-WP_000706188.1;Parent=gene-D5F92_RS05740;Dbxref=GenBank:WP_000706188.1;Name=WP_000706188.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706188.1;locus_tag=D5F92_RS05740;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_000706188.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 64172 64525 . + . ID=gene-D5F92_RS05745;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D5F92_RS05745;old_locus_tag=D5F92_05760 NZ_QYTJ01000027.1 Protein Homology CDS 64172 64525 . + 0 ID=cds-WP_000384867.1;Parent=gene-D5F92_RS05745;Dbxref=GenBank:WP_000384867.1;Name=WP_000384867.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384871.1;locus_tag=D5F92_RS05745;product=S4 domain-containing protein YaaA;protein_id=WP_000384867.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 64528 65637 . + . ID=gene-D5F92_RS05750;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=D5F92_RS05750;old_locus_tag=D5F92_05765 NZ_QYTJ01000027.1 Protein Homology CDS 64528 65637 . + 0 ID=cds-WP_000264870.1;Parent=gene-D5F92_RS05750;Dbxref=GenBank:WP_000264870.1;Name=WP_000264870.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632366.1;locus_tag=D5F92_RS05750;product=DNA replication/repair protein RecF;protein_id=WP_000264870.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 65649 66515 . - . ID=gene-D5F92_RS05755;Name=D5F92_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05755;old_locus_tag=D5F92_05770 NZ_QYTJ01000027.1 Protein Homology CDS 65649 66515 . - 0 ID=cds-WP_000398683.1;Parent=gene-D5F92_RS05755;Dbxref=GenBank:WP_000398683.1;Name=WP_000398683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650926.1;locus_tag=D5F92_RS05755;product=GRP family sugar transporter;protein_id=WP_000398683.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 66571 67233 . - . ID=gene-D5F92_RS05760;Name=D5F92_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05760;old_locus_tag=D5F92_05775 NZ_QYTJ01000027.1 Protein Homology CDS 66571 67233 . - 0 ID=cds-WP_001871057.1;Parent=gene-D5F92_RS05760;Dbxref=GenBank:WP_001871057.1;Name=WP_001871057.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001868421.1;locus_tag=D5F92_RS05760;product=helix-turn-helix domain-containing protein;protein_id=WP_001871057.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 67308 68789 . - . ID=gene-D5F92_RS05765;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=D5F92_RS05765;old_locus_tag=D5F92_05780 NZ_QYTJ01000027.1 Protein Homology CDS 67308 68789 . - 0 ID=cds-WP_000073440.1;Parent=gene-D5F92_RS05765;Dbxref=GenBank:WP_000073440.1;Name=WP_000073440.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003085743.1;locus_tag=D5F92_RS05765;product=IMP dehydrogenase;protein_id=WP_000073440.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 68946 69431 . - . ID=gene-D5F92_RS05770;Name=D5F92_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05770;old_locus_tag=D5F92_05785 NZ_QYTJ01000027.1 Protein Homology CDS 68946 69431 . - 0 ID=cds-WP_001034427.1;Parent=gene-D5F92_RS05770;Dbxref=GenBank:WP_001034427.1;Name=WP_001034427.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058854.1;locus_tag=D5F92_RS05770;product=arginine repressor;protein_id=WP_001034427.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 69441 70121 . - . ID=gene-D5F92_RS05775;Name=D5F92_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05775;old_locus_tag=D5F92_05790 NZ_QYTJ01000027.1 Protein Homology CDS 69441 70121 . - 0 ID=cds-WP_000628848.1;Parent=gene-D5F92_RS05775;Dbxref=GenBank:WP_000628848.1;Name=WP_000628848.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628850.1;locus_tag=D5F92_RS05775;product=Crp/Fnr family transcriptional regulator;protein_id=WP_000628848.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 70329 71033 . + . ID=gene-D5F92_RS05780;Name=D5F92_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05780;old_locus_tag=D5F92_05795 NZ_QYTJ01000027.1 Protein Homology CDS 70329 71033 . + 0 ID=cds-WP_086163557.1;Parent=gene-D5F92_RS05780;Dbxref=GenBank:WP_086163557.1;Name=WP_086163557.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159984.1;locus_tag=D5F92_RS05780;product=B3/B4 domain-containing protein;protein_id=WP_086163557.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 71300 72532 . + . ID=gene-D5F92_RS05785;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=D5F92_RS05785;old_locus_tag=D5F92_05800 NZ_QYTJ01000027.1 Protein Homology CDS 71300 72532 . + 0 ID=cds-WP_016481399.1;Parent=gene-D5F92_RS05785;Dbxref=GenBank:WP_016481399.1;Name=WP_016481399.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560827.1;locus_tag=D5F92_RS05785;product=arginine deiminase;protein_id=WP_016481399.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 72538 72969 . + . ID=gene-D5F92_RS05790;Name=D5F92_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05790;old_locus_tag=D5F92_05805 NZ_QYTJ01000027.1 Protein Homology CDS 72538 72969 . + 0 ID=cds-WP_000772114.1;Parent=gene-D5F92_RS05790;Dbxref=GenBank:WP_000772114.1;Name=WP_000772114.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772116.1;locus_tag=D5F92_RS05790;product=GNAT family N-acetyltransferase;protein_id=WP_000772114.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 72985 73998 . + . ID=gene-D5F92_RS05795;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D5F92_RS05795;old_locus_tag=D5F92_05810 NZ_QYTJ01000027.1 Protein Homology CDS 72985 73998 . + 0 ID=cds-WP_000195399.1;Parent=gene-D5F92_RS05795;Dbxref=GenBank:WP_000195399.1;Name=WP_000195399.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000195397.1;locus_tag=D5F92_RS05795;product=ornithine carbamoyltransferase;protein_id=WP_000195399.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 74061 75488 . + . ID=gene-D5F92_RS05800;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=D5F92_RS05800;old_locus_tag=D5F92_05815 NZ_QYTJ01000027.1 Protein Homology CDS 74061 75488 . + 0 ID=cds-WP_016503359.1;Parent=gene-D5F92_RS05800;Dbxref=GenBank:WP_016503359.1;Name=WP_016503359.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643994.1;locus_tag=D5F92_RS05800;product=arginine-ornithine antiporter;protein_id=WP_016503359.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 75509 76465 . + . ID=gene-D5F92_RS05805;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=D5F92_RS05805;old_locus_tag=D5F92_05820 NZ_QYTJ01000027.1 Protein Homology CDS 75509 76465 . + 0 ID=cds-WP_016503360.1;Parent=gene-D5F92_RS05805;Dbxref=GenBank:WP_016503360.1;Name=WP_016503360.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237849.1;locus_tag=D5F92_RS05805;product=carbamate kinase;protein_id=WP_016503360.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 76586 77611 . - . ID=gene-D5F92_RS05810;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D5F92_RS05810;old_locus_tag=D5F92_05825 NZ_QYTJ01000027.1 Protein Homology CDS 76586 77611 . - 0 ID=cds-WP_000165475.1;Parent=gene-D5F92_RS05810;Dbxref=GenBank:WP_000165475.1;Name=WP_000165475.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165454.1;locus_tag=D5F92_RS05810;product=tryptophan--tRNA ligase;protein_id=WP_000165475.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 77719 78411 . - . ID=gene-D5F92_RS05815;Name=D5F92_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05815;old_locus_tag=D5F92_05830 NZ_QYTJ01000027.1 Protein Homology CDS 77719 78411 . - 0 ID=cds-WP_124749338.1;Parent=gene-D5F92_RS05815;Dbxref=GenBank:WP_124749338.1;Name=WP_124749338.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250491.1;locus_tag=D5F92_RS05815;product=YoaK family protein;protein_id=WP_124749338.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 78655 79527 . + . ID=gene-D5F92_RS05820;Name=D5F92_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05820;old_locus_tag=D5F92_05835 NZ_QYTJ01000027.1 Protein Homology CDS 78655 79527 . + 0 ID=cds-WP_000037681.1;Parent=gene-D5F92_RS05820;Dbxref=GenBank:WP_000037681.1;Name=WP_000037681.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648791.1;locus_tag=D5F92_RS05820;product=YitT family protein;protein_id=WP_000037681.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 79593 81212 . + . ID=gene-D5F92_RS05825;Name=D5F92_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05825;old_locus_tag=D5F92_05840 NZ_QYTJ01000027.1 Protein Homology CDS 79593 81212 . + 0 ID=cds-WP_000958804.1;Parent=gene-D5F92_RS05825;Dbxref=GenBank:WP_000958804.1;Name=WP_000958804.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058862.1;locus_tag=D5F92_RS05825;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_000958804.1;transl_table=11 NZ_QYTJ01000027.1 RefSeq gene 81335 82884 . + . ID=gene-D5F92_RS05830;Name=D5F92_RS05830;end_range=82884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05830;old_locus_tag=D5F92_05845;partial=true NZ_QYTJ01000027.1 Protein Homology CDS 81335 82884 . + 0 ID=cds-WP_142996890.1;Parent=gene-D5F92_RS05830;Dbxref=GenBank:WP_142996890.1;Name=WP_142996890.1;end_range=82884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154428.1;locus_tag=D5F92_RS05830;partial=true;product=YfhO family protein;protein_id=WP_142996890.1;transl_table=11 ##sequence-region NZ_QYTJ01000028.1 1 28245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000028.1 RefSeq region 1 28245 . + . ID=NZ_QYTJ01000028.1:1..28245;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000028.1 RefSeq pseudogene 1 870 . + . ID=gene-D5F92_RS05835;Name=D5F92_RS05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS05835;old_locus_tag=D5F92_05850;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000028.1 Protein Homology CDS 1 870 . + 0 ID=cds-D5F92_RS05835;Parent=gene-D5F92_RS05835;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558209.1;locus_tag=D5F92_RS05835;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000028.1 RefSeq pseudogene 915 1298 . - . ID=gene-D5F92_RS05840;Name=D5F92_RS05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS05840;old_locus_tag=D5F92_05855;partial=true;pseudo=true;start_range=.,915 NZ_QYTJ01000028.1 Protein Homology CDS 915 1298 . - 0 ID=cds-D5F92_RS05840;Parent=gene-D5F92_RS05840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160532.1;locus_tag=D5F92_RS05840;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,915;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 1558 1983 . + . ID=gene-D5F92_RS05845;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=D5F92_RS05845;old_locus_tag=D5F92_05860 NZ_QYTJ01000028.1 Protein Homology CDS 1558 1983 . + 0 ID=cds-WP_001085802.1;Parent=gene-D5F92_RS05845;Dbxref=GenBank:WP_001085802.1;Name=WP_001085802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226069.1;locus_tag=D5F92_RS05845;product=50S ribosomal protein L11;protein_id=WP_001085802.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 2087 2776 . + . ID=gene-D5F92_RS05850;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=D5F92_RS05850;old_locus_tag=D5F92_05865 NZ_QYTJ01000028.1 Protein Homology CDS 2087 2776 . + 0 ID=cds-WP_001085664.1;Parent=gene-D5F92_RS05850;Dbxref=GenBank:WP_001085664.1;Name=WP_001085664.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=D5F92_RS05850;product=50S ribosomal protein L1;protein_id=WP_001085664.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 3166 4782 . + . ID=gene-D5F92_RS05855;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=D5F92_RS05855;old_locus_tag=D5F92_05870 NZ_QYTJ01000028.1 Protein Homology CDS 3166 4782 . + 0 ID=cds-WP_086163430.1;Parent=gene-D5F92_RS05855;Dbxref=GenBank:WP_086163430.1;Name=WP_086163430.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253836.1;locus_tag=D5F92_RS05855;product=nickel ABC transporter substrate-binding protein;protein_id=WP_086163430.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 4769 5713 . + . ID=gene-D5F92_RS05860;Name=D5F92_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05860;old_locus_tag=D5F92_05875 NZ_QYTJ01000028.1 Protein Homology CDS 4769 5713 . + 0 ID=cds-WP_000281515.1;Parent=gene-D5F92_RS05860;Dbxref=GenBank:WP_000281515.1;Name=WP_000281515.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281517.1;locus_tag=D5F92_RS05860;product=ABC transporter permease;protein_id=WP_000281515.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 5713 6519 . + . ID=gene-D5F92_RS05865;Name=D5F92_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05865;old_locus_tag=D5F92_05880 NZ_QYTJ01000028.1 Protein Homology CDS 5713 6519 . + 0 ID=cds-WP_185690644.1;Parent=gene-D5F92_RS05865;Dbxref=GenBank:WP_185690644.1;Name=WP_185690644.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647895.1;locus_tag=D5F92_RS05865;product=ABC transporter permease;protein_id=WP_185690644.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 6507 7295 . + . ID=gene-D5F92_RS05870;Name=D5F92_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05870;old_locus_tag=D5F92_05885 NZ_QYTJ01000028.1 Protein Homology CDS 6507 7295 . + 0 ID=cds-WP_016481063.1;Parent=gene-D5F92_RS05870;Dbxref=GenBank:WP_016481063.1;Name=WP_016481063.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436158.1;locus_tag=D5F92_RS05870;product=ATP-binding cassette domain-containing protein;protein_id=WP_016481063.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 7282 7962 . + . ID=gene-D5F92_RS05875;Name=D5F92_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05875;old_locus_tag=D5F92_05890 NZ_QYTJ01000028.1 Protein Homology CDS 7282 7962 . + 0 ID=cds-WP_016481062.1;Parent=gene-D5F92_RS05875;Dbxref=GenBank:WP_016481062.1;Name=WP_016481062.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959471.1;locus_tag=D5F92_RS05875;product=ABC transporter ATP-binding protein;protein_id=WP_016481062.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 8083 8811 . + . ID=gene-D5F92_RS05880;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=D5F92_RS05880;old_locus_tag=D5F92_05895 NZ_QYTJ01000028.1 Protein Homology CDS 8083 8811 . + 0 ID=cds-WP_000433491.1;Parent=gene-D5F92_RS05880;Dbxref=GenBank:WP_000433491.1;Name=WP_000433491.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985765.1;locus_tag=D5F92_RS05880;product=UMP kinase;protein_id=WP_000433491.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 8827 9384 . + . ID=gene-D5F92_RS05885;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=D5F92_RS05885;old_locus_tag=D5F92_05900 NZ_QYTJ01000028.1 Protein Homology CDS 8827 9384 . + 0 ID=cds-WP_000159519.1;Parent=gene-D5F92_RS05885;Dbxref=GenBank:WP_000159519.1;Name=WP_000159519.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=D5F92_RS05885;product=ribosome recycling factor;protein_id=WP_000159519.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 9502 10356 . + . ID=gene-D5F92_RS05890;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=D5F92_RS05890;old_locus_tag=D5F92_05905 NZ_QYTJ01000028.1 Protein Homology CDS 9502 10356 . + 0 ID=cds-WP_016481060.1;Parent=gene-D5F92_RS05890;Dbxref=GenBank:WP_016481060.1;Name=WP_016481060.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095444.1;locus_tag=D5F92_RS05890;product=RNA-binding virulence regulatory protein CvfB;protein_id=WP_016481060.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 10494 11003 . + . ID=gene-D5F92_RS05895;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=D5F92_RS05895;old_locus_tag=D5F92_05910 NZ_QYTJ01000028.1 Protein Homology CDS 10494 11003 . + 0 ID=cds-WP_016481059.1;Parent=gene-D5F92_RS05895;Dbxref=GenBank:WP_016481059.1;Name=WP_016481059.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481059.1;locus_tag=D5F92_RS05895;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_016481059.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 11000 11215 . + . ID=gene-D5F92_RS05900;Name=D5F92_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05900;old_locus_tag=D5F92_05915 NZ_QYTJ01000028.1 Protein Homology CDS 11000 11215 . + 0 ID=cds-WP_001232073.1;Parent=gene-D5F92_RS05900;Dbxref=GenBank:WP_001232073.1;Name=WP_001232073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232073.1;locus_tag=D5F92_RS05900;product=YozE family protein;protein_id=WP_001232073.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 11367 13139 . + . ID=gene-D5F92_RS05905;Name=D5F92_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05905;old_locus_tag=D5F92_05920 NZ_QYTJ01000028.1 Protein Homology CDS 11367 13139 . + 0 ID=cds-WP_001270883.1;Parent=gene-D5F92_RS05905;Dbxref=GenBank:WP_001270883.1;Name=WP_001270883.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646510.1;locus_tag=D5F92_RS05905;product=oleate hydratase;protein_id=WP_001270883.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 13263 14249 . + . ID=gene-D5F92_RS05910;Name=D5F92_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05910;old_locus_tag=D5F92_05925 NZ_QYTJ01000028.1 Protein Homology CDS 13263 14249 . + 0 ID=cds-WP_001158917.1;Parent=gene-D5F92_RS05910;Dbxref=GenBank:WP_001158917.1;Name=WP_001158917.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158936.1;locus_tag=D5F92_RS05910;product=PhoH family protein;protein_id=WP_001158917.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 14341 15144 . - . ID=gene-D5F92_RS05915;Name=D5F92_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05915;old_locus_tag=D5F92_05930 NZ_QYTJ01000028.1 Protein Homology CDS 14341 15144 . - 0 ID=cds-WP_016503074.1;Parent=gene-D5F92_RS05915;Dbxref=GenBank:WP_016503074.1;Name=WP_016503074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349554.1;locus_tag=D5F92_RS05915;product=DUF4037 domain-containing protein;protein_id=WP_016503074.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 15336 15812 . + . ID=gene-D5F92_RS05920;Name=D5F92_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05920;old_locus_tag=D5F92_05935 NZ_QYTJ01000028.1 Protein Homology CDS 15336 15812 . + 0 ID=cds-WP_000806806.1;Parent=gene-D5F92_RS05920;Dbxref=GenBank:WP_000806806.1;Name=WP_000806806.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649862.1;locus_tag=D5F92_RS05920;product=NUDIX hydrolase;protein_id=WP_000806806.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 16134 16940 . + . ID=gene-D5F92_RS05935;Name=D5F92_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05935;old_locus_tag=D5F92_05950 NZ_QYTJ01000028.1 Protein Homology CDS 16134 16940 . + 0 ID=cds-WP_016481054.1;Parent=gene-D5F92_RS05935;Dbxref=GenBank:WP_016481054.1;Name=WP_016481054.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705139.1;locus_tag=D5F92_RS05935;product=class I SAM-dependent methyltransferase;protein_id=WP_016481054.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 17335 17832 . + . ID=gene-D5F92_RS05940;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D5F92_RS05940;old_locus_tag=D5F92_05955 NZ_QYTJ01000028.1 Protein Homology CDS 17335 17832 . + 0 ID=cds-WP_001868390.1;Parent=gene-D5F92_RS05940;Dbxref=GenBank:WP_001868390.1;Name=WP_001868390.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=D5F92_RS05940;product=rRNA maturation RNase YbeY;protein_id=WP_001868390.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 17813 18211 . + . ID=gene-D5F92_RS05945;Name=dagK;gbkey=Gene;gene=dagK;gene_biotype=protein_coding;locus_tag=D5F92_RS05945;old_locus_tag=D5F92_05960 NZ_QYTJ01000028.1 Protein Homology CDS 17813 18211 . + 0 ID=cds-WP_000365220.1;Parent=gene-D5F92_RS05945;Dbxref=GenBank:WP_000365220.1;Name=WP_000365220.1;gbkey=CDS;gene=dagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365222.1;locus_tag=D5F92_RS05945;product=diacylglycerol kinase;protein_id=WP_000365220.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 18253 19152 . + . ID=gene-D5F92_RS05950;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=D5F92_RS05950;old_locus_tag=D5F92_05965 NZ_QYTJ01000028.1 Protein Homology CDS 18253 19152 . + 0 ID=cds-WP_000143289.1;Parent=gene-D5F92_RS05950;Dbxref=GenBank:WP_000143289.1;Name=WP_000143289.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012658024.1;locus_tag=D5F92_RS05950;product=GTPase Era;protein_id=WP_000143289.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 19389 19778 . + . ID=gene-D5F92_RS05955;Name=D5F92_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05955;old_locus_tag=D5F92_05970 NZ_QYTJ01000028.1 Protein Homology CDS 19389 19778 . + 0 ID=cds-WP_000551530.1;Parent=gene-D5F92_RS05955;Dbxref=GenBank:WP_000551530.1;Name=WP_000551530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771275.1;locus_tag=D5F92_RS05955;product=hypothetical protein;protein_id=WP_000551530.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 20238 20489 . + . ID=gene-D5F92_RS05960;Name=D5F92_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05960;old_locus_tag=D5F92_05975 NZ_QYTJ01000028.1 Protein Homology CDS 20238 20489 . + 0 ID=cds-WP_180383435.1;Parent=gene-D5F92_RS05960;Dbxref=GenBank:WP_180383435.1;Name=WP_180383435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000973012.1;locus_tag=D5F92_RS05960;product=hypothetical protein;protein_id=WP_180383435.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 20517 20762 . + . ID=gene-D5F92_RS05965;Name=D5F92_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05965;old_locus_tag=D5F92_05980 NZ_QYTJ01000028.1 Protein Homology CDS 20517 20762 . + 0 ID=cds-WP_228761751.1;Parent=gene-D5F92_RS05965;Dbxref=GenBank:WP_228761751.1;Name=WP_228761751.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=D5F92_RS05965;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_228761751.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 21090 21284 . - . ID=gene-D5F92_RS05975;Name=D5F92_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05975;old_locus_tag=D5F92_05990 NZ_QYTJ01000028.1 Protein Homology CDS 21090 21284 . - 0 ID=cds-WP_086163427.1;Parent=gene-D5F92_RS05975;Dbxref=GenBank:WP_086163427.1;Name=WP_086163427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606011.1;locus_tag=D5F92_RS05975;product=hypothetical protein;protein_id=WP_086163427.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq pseudogene 21283 21476 . + . ID=gene-D5F92_RS11410;Name=D5F92_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11410;old_locus_tag=D5F92_05995;pseudo=true NZ_QYTJ01000028.1 Protein Homology CDS 21283 21476 . + 0 ID=cds-D5F92_RS11410;Parent=gene-D5F92_RS11410;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001878969.1;locus_tag=D5F92_RS11410;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 21526 21702 . - . ID=gene-D5F92_RS05985;Name=D5F92_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05985;old_locus_tag=D5F92_06000 NZ_QYTJ01000028.1 Protein Homology CDS 21526 21702 . - 0 ID=cds-WP_000039432.1;Parent=gene-D5F92_RS05985;Dbxref=GenBank:WP_000039432.1;Name=WP_000039432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039432.1;locus_tag=D5F92_RS05985;product=hypothetical protein;protein_id=WP_000039432.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 21738 23330 . - . ID=gene-D5F92_RS05990;Name=D5F92_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS05990;old_locus_tag=D5F92_06005 NZ_QYTJ01000028.1 Protein Homology CDS 21738 23330 . - 0 ID=cds-WP_086163426.1;Parent=gene-D5F92_RS05990;Dbxref=GenBank:WP_086163426.1;Name=WP_086163426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646210.1;locus_tag=D5F92_RS05990;product=transglutaminase domain-containing protein;protein_id=WP_086163426.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 23392 23460 . - . ID=gene-D5F92_RS11265;Name=shp2;gbkey=Gene;gene=shp2;gene_biotype=protein_coding;locus_tag=D5F92_RS11265 NZ_QYTJ01000028.1 Protein Homology CDS 23392 23460 . - 0 ID=cds-WP_132833258.1;Parent=gene-D5F92_RS11265;Dbxref=GenBank:WP_132833258.1;Name=WP_132833258.1;gbkey=CDS;gene=shp2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128650799.1;locus_tag=D5F92_RS11265;product=peptide pheromone SHP2;protein_id=WP_132833258.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 23548 24396 . + . ID=gene-D5F92_RS05995;Name=rgg2;gbkey=Gene;gene=rgg2;gene_biotype=protein_coding;locus_tag=D5F92_RS05995;old_locus_tag=D5F92_06010 NZ_QYTJ01000028.1 Protein Homology CDS 23548 24396 . + 0 ID=cds-WP_000410031.1;Parent=gene-D5F92_RS05995;Dbxref=GenBank:WP_000410031.1;Name=WP_000410031.1;gbkey=CDS;gene=rgg2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648250.1;locus_tag=D5F92_RS05995;product=quorum-sensing system transcriptional regulator Rgg2;protein_id=WP_000410031.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 24545 25366 . + . ID=gene-D5F92_RS06000;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=D5F92_RS06000;old_locus_tag=D5F92_06015 NZ_QYTJ01000028.1 Protein Homology CDS 24545 25366 . + 0 ID=cds-WP_016503065.1;Parent=gene-D5F92_RS06000;Dbxref=GenBank:WP_016503065.1;Name=WP_016503065.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114601.1;locus_tag=D5F92_RS06000;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_016503065.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 25357 25950 . + . ID=gene-D5F92_RS06005;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=D5F92_RS06005;old_locus_tag=D5F92_06020 NZ_QYTJ01000028.1 Protein Homology CDS 25357 25950 . + 0 ID=cds-WP_000930247.1;Parent=gene-D5F92_RS06005;Dbxref=GenBank:WP_000930247.1;Name=WP_000930247.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770961.1;locus_tag=D5F92_RS06005;product=dephospho-CoA kinase;protein_id=WP_000930247.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 26074 26775 . + . ID=gene-D5F92_RS06010;Name=D5F92_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06010;old_locus_tag=D5F92_06025 NZ_QYTJ01000028.1 Protein Homology CDS 26074 26775 . + 0 ID=cds-WP_000424347.1;Parent=gene-D5F92_RS06010;Dbxref=GenBank:WP_000424347.1;Name=WP_000424347.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424353.1;locus_tag=D5F92_RS06010;product=ABC transporter ATP-binding protein;protein_id=WP_000424347.1;transl_table=11 NZ_QYTJ01000028.1 RefSeq gene 26765 28245 . + . ID=gene-D5F92_RS06015;Name=D5F92_RS06015;end_range=28245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06015;old_locus_tag=D5F92_06030;partial=true NZ_QYTJ01000028.1 Protein Homology CDS 26765 28245 . + 0 ID=cds-WP_124785487.1;Parent=gene-D5F92_RS06015;Dbxref=GenBank:WP_124785487.1;Name=WP_124785487.1;end_range=28245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200920.1;locus_tag=D5F92_RS06015;partial=true;product=hypothetical protein;protein_id=WP_124785487.1;transl_table=11 ##sequence-region NZ_QYTJ01000029.1 1 5857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000029.1 RefSeq region 1 5857 . + . ID=NZ_QYTJ01000029.1:1..5857;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000029.1 RefSeq pseudogene 1 680 . + . ID=gene-D5F92_RS06020;Name=D5F92_RS06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06020;old_locus_tag=D5F92_06035;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000029.1 Protein Homology CDS 1 680 . + 1 ID=cds-D5F92_RS06020;Parent=gene-D5F92_RS06020;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285452.1;locus_tag=D5F92_RS06020;partial=true;product=Rgg family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000029.1 RefSeq gene 753 1934 . + . ID=gene-D5F92_RS06025;Name=D5F92_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06025;old_locus_tag=D5F92_06040 NZ_QYTJ01000029.1 Protein Homology CDS 753 1934 . + 0 ID=cds-WP_016480267.1;Parent=gene-D5F92_RS06025;Dbxref=GenBank:WP_016480267.1;Name=WP_016480267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024508.1;locus_tag=D5F92_RS06025;product=MFS transporter;protein_id=WP_016480267.1;transl_table=11 NZ_QYTJ01000029.1 RefSeq gene 1996 2646 . - . ID=gene-D5F92_RS06030;Name=D5F92_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06030;old_locus_tag=D5F92_06045 NZ_QYTJ01000029.1 Protein Homology CDS 1996 2646 . - 0 ID=cds-WP_000812157.1;Parent=gene-D5F92_RS06030;Dbxref=GenBank:WP_000812157.1;Name=WP_000812157.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767937.1;locus_tag=D5F92_RS06030;product=ABC transporter permease;protein_id=WP_000812157.1;transl_table=11 NZ_QYTJ01000029.1 RefSeq pseudogene 2647 3459 . - . ID=gene-D5F92_RS06035;Name=D5F92_RS06035;end_range=3459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06035;old_locus_tag=D5F92_06050;partial=true;pseudo=true NZ_QYTJ01000029.1 Protein Homology CDS 2647 3459 . - 0 ID=cds-D5F92_RS06035;Parent=gene-D5F92_RS06035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003562594.1;locus_tag=D5F92_RS06035;partial=true;product=osmoprotectant ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_QYTJ01000029.1 RefSeq gene 3576 4211 . - . ID=gene-D5F92_RS06040;Name=D5F92_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06040;old_locus_tag=D5F92_06055 NZ_QYTJ01000029.1 Protein Homology CDS 3576 4211 . - 0 ID=cds-WP_000247053.1;Parent=gene-D5F92_RS06040;Dbxref=GenBank:WP_000247053.1;Name=WP_000247053.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247049.1;locus_tag=D5F92_RS06040;product=ABC transporter permease;protein_id=WP_000247053.1;transl_table=11 NZ_QYTJ01000029.1 RefSeq gene 4211 5356 . - . ID=gene-D5F92_RS06045;Name=D5F92_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06045;old_locus_tag=D5F92_06060 NZ_QYTJ01000029.1 Protein Homology CDS 4211 5356 . - 0 ID=cds-WP_000529593.1;Parent=gene-D5F92_RS06045;Dbxref=GenBank:WP_000529593.1;Name=WP_000529593.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529591.1;locus_tag=D5F92_RS06045;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_000529593.1;transl_table=11 NZ_QYTJ01000029.1 RefSeq gene 5777 5857 . + . ID=gene-D5F92_RS06050;Name=D5F92_RS06050;end_range=5857,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS06050;old_locus_tag=D5F92_06065;partial=true NZ_QYTJ01000029.1 cmsearch rRNA 5777 5857 . + . ID=rna-D5F92_RS06050;Parent=gene-D5F92_RS06050;Dbxref=RFAM:RF00177;end_range=5857,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06050;partial=true;product=16S ribosomal RNA NZ_QYTJ01000029.1 cmsearch exon 5777 5857 . + . ID=exon-D5F92_RS06050-1;Parent=rna-D5F92_RS06050;Dbxref=RFAM:RF00177;end_range=5857,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06050;partial=true;product=16S ribosomal RNA ##sequence-region NZ_QYTJ01000003.1 1 67384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000003.1 RefSeq region 1 67384 . + . ID=NZ_QYTJ01000003.1:1..67384;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000003.1 RefSeq gene 1 974 . + . ID=gene-D5F92_RS00595;Name=D5F92_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00595;old_locus_tag=D5F92_00600;partial=true;start_range=.,1 NZ_QYTJ01000003.1 Protein Homology CDS 1 974 . + 2 ID=cds-WP_260426597.1;Parent=gene-D5F92_RS00595;Dbxref=GenBank:WP_260426597.1;Name=WP_260426597.1;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814045.1;locus_tag=D5F92_RS00595;partial=true;product=YbaK/EbsC family protein;protein_id=WP_260426597.1;start_range=.,1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 1099 1683 . + . ID=gene-D5F92_RS00600;Name=D5F92_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00600;old_locus_tag=D5F92_00605 NZ_QYTJ01000003.1 Protein Homology CDS 1099 1683 . + 0 ID=cds-WP_124749611.1;Parent=gene-D5F92_RS00600;Dbxref=GenBank:WP_124749611.1;Name=WP_124749611.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842267.1;locus_tag=D5F92_RS00600;product=glycoside hydrolase family 73 protein;protein_id=WP_124749611.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 1806 6212 . + . ID=gene-D5F92_RS00605;Name=D5F92_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00605;old_locus_tag=D5F92_00610 NZ_QYTJ01000003.1 Protein Homology CDS 1806 6212 . + 0 ID=cds-WP_001292134.1;Parent=gene-D5F92_RS00605;Dbxref=GenBank:WP_001292134.1;Name=WP_001292134.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889165.1;locus_tag=D5F92_RS00605;product=PolC-type DNA polymerase III;protein_id=WP_001292134.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 6339 6764 . + . ID=gene-D5F92_RS00610;Name=D5F92_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00610;old_locus_tag=D5F92_00615 NZ_QYTJ01000003.1 Protein Homology CDS 6339 6764 . + 0 ID=cds-WP_124749069.1;Parent=gene-D5F92_RS00610;Dbxref=GenBank:WP_124749069.1;Name=WP_124749069.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526288.1;locus_tag=D5F92_RS00610;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_124749069.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 6897 7511 . + . ID=gene-D5F92_RS00615;Name=D5F92_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00615;old_locus_tag=D5F92_00620 NZ_QYTJ01000003.1 Protein Homology CDS 6897 7511 . + 0 ID=cds-WP_000008880.1;Parent=gene-D5F92_RS00615;Dbxref=GenBank:WP_000008880.1;Name=WP_000008880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285012.1;locus_tag=D5F92_RS00615;product=nitroreductase family protein;protein_id=WP_000008880.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 7683 9554 . - . ID=gene-D5F92_RS00620;Name=D5F92_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00620;old_locus_tag=D5F92_00625 NZ_QYTJ01000003.1 Protein Homology CDS 7683 9554 . - 0 ID=cds-WP_016503252.1;Parent=gene-D5F92_RS00620;Dbxref=GenBank:WP_016503252.1;Name=WP_016503252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644057.1;locus_tag=D5F92_RS00620;product=transglutaminase domain-containing protein;protein_id=WP_016503252.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 10062 10700 . - . ID=gene-D5F92_RS00630;Name=D5F92_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00630;old_locus_tag=D5F92_00635 NZ_QYTJ01000003.1 Protein Homology CDS 10062 10700 . - 0 ID=cds-WP_016503250.1;Parent=gene-D5F92_RS00630;Dbxref=GenBank:WP_016503250.1;Name=WP_016503250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000597402.1;locus_tag=D5F92_RS00630;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_016503250.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 10712 11719 . - . ID=gene-D5F92_RS00635;Name=D5F92_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00635;old_locus_tag=D5F92_00640 NZ_QYTJ01000003.1 Protein Homology CDS 10712 11719 . - 0 ID=cds-WP_016503249.1;Parent=gene-D5F92_RS00635;Dbxref=GenBank:WP_016503249.1;Name=WP_016503249.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503249.1;locus_tag=D5F92_RS00635;product=sugar kinase;protein_id=WP_016503249.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 11745 12383 . - . ID=gene-D5F92_RS00640;Name=dhuI;gbkey=Gene;gene=dhuI;gene_biotype=protein_coding;locus_tag=D5F92_RS00640;old_locus_tag=D5F92_00645 NZ_QYTJ01000003.1 Protein Homology CDS 11745 12383 . - 0 ID=cds-WP_016481250.1;Parent=gene-D5F92_RS00640;Dbxref=GenBank:WP_016481250.1;Name=WP_016481250.1;gbkey=CDS;gene=dhuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684791.1;locus_tag=D5F92_RS00640;product=5-dehydro-4-deoxy-D-glucuronate isomerase DhuI;protein_id=WP_016481250.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 12400 13212 . - . ID=gene-D5F92_RS00645;Name=dhuD;gbkey=Gene;gene=dhuD;gene_biotype=protein_coding;locus_tag=D5F92_RS00645;old_locus_tag=D5F92_00650 NZ_QYTJ01000003.1 Protein Homology CDS 12400 13212 . - 0 ID=cds-WP_124749613.1;Parent=gene-D5F92_RS00645;Dbxref=GenBank:WP_124749613.1;Name=WP_124749613.1;gbkey=CDS;gene=dhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139169.1;locus_tag=D5F92_RS00645;product=monomeric 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DhuD;protein_id=WP_124749613.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 13489 13923 . + . ID=gene-D5F92_RS00655;Name=D5F92_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00655;old_locus_tag=D5F92_00660 NZ_QYTJ01000003.1 Protein Homology CDS 13489 13923 . + 0 ID=cds-WP_016503248.1;Parent=gene-D5F92_RS00655;Dbxref=GenBank:WP_016503248.1;Name=WP_016503248.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590444.1;locus_tag=D5F92_RS00655;product=PTS sugar transporter subunit IIA;protein_id=WP_016503248.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 13926 15122 . + . ID=gene-D5F92_RS00660;Name=D5F92_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00660;old_locus_tag=D5F92_00665 NZ_QYTJ01000003.1 Protein Homology CDS 13926 15122 . + 0 ID=cds-WP_124785403.1;Parent=gene-D5F92_RS00660;Dbxref=GenBank:WP_124785403.1;Name=WP_124785403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975712.1;locus_tag=D5F92_RS00660;product=glycoside hydrolase family 88 protein;protein_id=WP_124785403.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 15177 15671 . + . ID=gene-D5F92_RS00665;Name=D5F92_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00665;old_locus_tag=D5F92_00670 NZ_QYTJ01000003.1 Protein Homology CDS 15177 15671 . + 0 ID=cds-WP_000718802.1;Parent=gene-D5F92_RS00665;Dbxref=GenBank:WP_000718802.1;Name=WP_000718802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718799.1;locus_tag=D5F92_RS00665;product=PTS sugar transporter subunit IIB;protein_id=WP_000718802.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 15707 16573 . + . ID=gene-D5F92_RS00670;Name=D5F92_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00670;old_locus_tag=D5F92_00675 NZ_QYTJ01000003.1 Protein Homology CDS 15707 16573 . + 0 ID=cds-WP_000355267.1;Parent=gene-D5F92_RS00670;Dbxref=GenBank:WP_000355267.1;Name=WP_000355267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058783.1;locus_tag=D5F92_RS00670;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000355267.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 16560 17375 . + . ID=gene-D5F92_RS00675;Name=D5F92_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00675;old_locus_tag=D5F92_00680 NZ_QYTJ01000003.1 Protein Homology CDS 16560 17375 . + 0 ID=cds-WP_000147945.1;Parent=gene-D5F92_RS00675;Dbxref=GenBank:WP_000147945.1;Name=WP_000147945.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147944.1;locus_tag=D5F92_RS00675;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000147945.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 17455 19359 . + . ID=gene-D5F92_RS00680;Name=D5F92_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00680;old_locus_tag=D5F92_00685 NZ_QYTJ01000003.1 Protein Homology CDS 17455 19359 . + 0 ID=cds-WP_124749068.1;Parent=gene-D5F92_RS00680;Dbxref=GenBank:WP_124749068.1;Name=WP_124749068.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654956.1;locus_tag=D5F92_RS00680;product=heparinase II/III domain-containing protein;protein_id=WP_124749068.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 19439 20440 . + . ID=gene-D5F92_RS00685;Name=D5F92_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00685;old_locus_tag=D5F92_00690 NZ_QYTJ01000003.1 Protein Homology CDS 19439 20440 . + 0 ID=cds-WP_000038817.1;Parent=gene-D5F92_RS00685;Dbxref=GenBank:WP_000038817.1;Name=WP_000038817.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038815.1;locus_tag=D5F92_RS00685;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000038817.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 20511 21125 . - . ID=gene-D5F92_RS00690;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=D5F92_RS00690;old_locus_tag=D5F92_00695 NZ_QYTJ01000003.1 Protein Homology CDS 20511 21125 . - 0 ID=cds-WP_001272875.1;Parent=gene-D5F92_RS00690;Dbxref=GenBank:WP_001272875.1;Name=WP_001272875.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058782.1;locus_tag=D5F92_RS00690;product=peptide deformylase;protein_id=WP_001272875.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 21191 21835 . - . ID=gene-D5F92_RS00695;Name=D5F92_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00695;old_locus_tag=D5F92_00700 NZ_QYTJ01000003.1 Protein Homology CDS 21191 21835 . - 0 ID=cds-WP_000350701.1;Parent=gene-D5F92_RS00695;Dbxref=GenBank:WP_000350701.1;Name=WP_000350701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350701.1;locus_tag=D5F92_RS00695;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_000350701.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 21947 23110 . + . ID=gene-D5F92_RS00705;Name=D5F92_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00705;old_locus_tag=D5F92_00710 NZ_QYTJ01000003.1 Protein Homology CDS 21947 23110 . + 0 ID=cds-WP_016503245.1;Parent=gene-D5F92_RS00705;Dbxref=GenBank:WP_016503245.1;Name=WP_016503245.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689132.1;locus_tag=D5F92_RS00705;product=MFS transporter;protein_id=WP_016503245.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 23156 24139 . - . ID=gene-D5F92_RS00710;Name=D5F92_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00710;old_locus_tag=D5F92_00715 NZ_QYTJ01000003.1 Protein Homology CDS 23156 24139 . - 0 ID=cds-WP_000566092.1;Parent=gene-D5F92_RS00710;Dbxref=GenBank:WP_000566092.1;Name=WP_000566092.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566098.1;locus_tag=D5F92_RS00710;product=Gfo/Idh/MocA family protein;protein_id=WP_000566092.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 24287 26182 . + . ID=gene-D5F92_RS00715;Name=D5F92_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00715;old_locus_tag=D5F92_00720 NZ_QYTJ01000003.1 Protein Homology CDS 24287 26182 . + 0 ID=cds-WP_000599041.1;Parent=gene-D5F92_RS00715;Dbxref=GenBank:WP_000599041.1;Name=WP_000599041.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599042.1;locus_tag=D5F92_RS00715;product=M13 family metallopeptidase;protein_id=WP_000599041.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 26232 27185 . - . ID=gene-D5F92_RS00720;Name=D5F92_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00720;old_locus_tag=D5F92_00725 NZ_QYTJ01000003.1 Protein Homology CDS 26232 27185 . - 0 ID=cds-WP_000737083.1;Parent=gene-D5F92_RS00720;Dbxref=GenBank:WP_000737083.1;Name=WP_000737083.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737092.1;locus_tag=D5F92_RS00720;product=S66 family peptidase;protein_id=WP_000737083.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 27352 27588 . + . ID=gene-D5F92_RS00725;Name=D5F92_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00725;old_locus_tag=D5F92_00730 NZ_QYTJ01000003.1 Protein Homology CDS 27352 27588 . + 0 ID=cds-WP_000080855.1;Parent=gene-D5F92_RS00725;Dbxref=GenBank:WP_000080855.1;Name=WP_000080855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080857.1;locus_tag=D5F92_RS00725;product=hypothetical protein;protein_id=WP_000080855.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 27590 29659 . + . ID=gene-D5F92_RS00730;Name=D5F92_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00730;old_locus_tag=D5F92_00735 NZ_QYTJ01000003.1 Protein Homology CDS 27590 29659 . + 0 ID=cds-WP_000393092.1;Parent=gene-D5F92_RS00730;Dbxref=GenBank:WP_000393092.1;Name=WP_000393092.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771255.1;locus_tag=D5F92_RS00730;product=cation:proton antiporter;protein_id=WP_000393092.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 29731 29801 . - . ID=gene-D5F92_RS00735;Name=D5F92_RS00735;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS00735;old_locus_tag=D5F92_00740 NZ_QYTJ01000003.1 tRNAscan-SE tRNA 29731 29801 . - . ID=rna-D5F92_RS00735;Parent=gene-D5F92_RS00735;anticodon=(pos:complement(29767..29769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00735;product=tRNA-Cys NZ_QYTJ01000003.1 tRNAscan-SE exon 29731 29801 . - . ID=exon-D5F92_RS00735-1;Parent=rna-D5F92_RS00735;anticodon=(pos:complement(29767..29769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS00735;product=tRNA-Cys NZ_QYTJ01000003.1 RefSeq gene 29936 31468 . - . ID=gene-D5F92_RS00740;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=D5F92_RS00740;old_locus_tag=D5F92_00745 NZ_QYTJ01000003.1 Protein Homology CDS 29936 31468 . - 0 ID=cds-WP_000242127.1;Parent=gene-D5F92_RS00740;Dbxref=GenBank:WP_000242127.1;Name=WP_000242127.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242134.1;locus_tag=D5F92_RS00740;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000242127.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 31486 32046 . - . ID=gene-D5F92_RS00745;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=D5F92_RS00745;old_locus_tag=D5F92_00750 NZ_QYTJ01000003.1 Protein Homology CDS 31486 32046 . - 0 ID=cds-WP_016503239.1;Parent=gene-D5F92_RS00745;Dbxref=GenBank:WP_016503239.1;Name=WP_016503239.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002273221.1;locus_tag=D5F92_RS00745;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_016503239.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 32323 33093 . + . ID=gene-D5F92_RS00750;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=D5F92_RS00750;old_locus_tag=D5F92_00755 NZ_QYTJ01000003.1 Protein Homology CDS 32323 33093 . + 0 ID=cds-WP_000268454.1;Parent=gene-D5F92_RS00750;Dbxref=GenBank:WP_000268454.1;Name=WP_000268454.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268454.1;locus_tag=D5F92_RS00750;product=30S ribosomal protein S2;protein_id=WP_000268454.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 33187 34227 . + . ID=gene-D5F92_RS00755;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=D5F92_RS00755;old_locus_tag=D5F92_00760 NZ_QYTJ01000003.1 Protein Homology CDS 33187 34227 . + 0 ID=cds-WP_000808080.1;Parent=gene-D5F92_RS00755;Dbxref=GenBank:WP_000808080.1;Name=WP_000808080.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808079.1;locus_tag=D5F92_RS00755;product=translation elongation factor Ts;protein_id=WP_000808080.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 34387 34848 . - . ID=gene-D5F92_RS00760;Name=D5F92_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00760;old_locus_tag=D5F92_00765 NZ_QYTJ01000003.1 Protein Homology CDS 34387 34848 . - 0 ID=cds-WP_001106578.1;Parent=gene-D5F92_RS00760;Dbxref=GenBank:WP_001106578.1;Name=WP_001106578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650709.1;locus_tag=D5F92_RS00760;product=COG2426 family protein;protein_id=WP_001106578.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 35021 35485 . + . ID=gene-D5F92_RS00765;Name=D5F92_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00765;old_locus_tag=D5F92_00770 NZ_QYTJ01000003.1 Protein Homology CDS 35021 35485 . + 0 ID=cds-WP_000985641.1;Parent=gene-D5F92_RS00765;Dbxref=GenBank:WP_000985641.1;Name=WP_000985641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985642.1;locus_tag=D5F92_RS00765;product=CtsR family transcriptional regulator;protein_id=WP_000985641.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 35482 37929 . + . ID=gene-D5F92_RS00770;Name=D5F92_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00770;old_locus_tag=D5F92_00775 NZ_QYTJ01000003.1 Protein Homology CDS 35482 37929 . + 0 ID=cds-WP_124749065.1;Parent=gene-D5F92_RS00770;Dbxref=GenBank:WP_124749065.1;Name=WP_124749065.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768440.1;locus_tag=D5F92_RS00770;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_124749065.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 38149 38640 . - . ID=gene-D5F92_RS00775;Name=D5F92_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00775;old_locus_tag=D5F92_00780 NZ_QYTJ01000003.1 Protein Homology CDS 38149 38640 . - 0 ID=cds-WP_000586899.1;Parent=gene-D5F92_RS00775;Dbxref=GenBank:WP_000586899.1;Name=WP_000586899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771630.1;locus_tag=D5F92_RS00775;product=GNAT family N-acetyltransferase;protein_id=WP_000586899.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 38654 39295 . - . ID=gene-D5F92_RS00780;Name=D5F92_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00780;old_locus_tag=D5F92_00785 NZ_QYTJ01000003.1 Protein Homology CDS 38654 39295 . - 0 ID=cds-WP_000909522.1;Parent=gene-D5F92_RS00780;Dbxref=GenBank:WP_000909522.1;Name=WP_000909522.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775268.1;locus_tag=D5F92_RS00780;product=deoxynucleoside kinase;protein_id=WP_000909522.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 39416 40393 . - . ID=gene-D5F92_RS00785;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=D5F92_RS00785;old_locus_tag=D5F92_00790 NZ_QYTJ01000003.1 Protein Homology CDS 39416 40393 . - 0 ID=cds-WP_000192732.1;Parent=gene-D5F92_RS00785;Dbxref=GenBank:WP_000192732.1;Name=WP_000192732.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632282.1;locus_tag=D5F92_RS00785;product=tRNA dihydrouridine synthase DusB;protein_id=WP_000192732.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 40377 41252 . - . ID=gene-D5F92_RS00790;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=D5F92_RS00790;old_locus_tag=D5F92_00795 NZ_QYTJ01000003.1 Protein Homology CDS 40377 41252 . - 0 ID=cds-WP_016503236.1;Parent=gene-D5F92_RS00790;Dbxref=GenBank:WP_016503236.1;Name=WP_016503236.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645314.1;locus_tag=D5F92_RS00790;product=Hsp33 family molecular chaperone HslO;protein_id=WP_016503236.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 41392 42648 . - . ID=gene-D5F92_RS00795;Name=D5F92_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00795;old_locus_tag=D5F92_00800 NZ_QYTJ01000003.1 Protein Homology CDS 41392 42648 . - 0 ID=cds-WP_016481235.1;Parent=gene-D5F92_RS00795;Dbxref=GenBank:WP_016481235.1;Name=WP_016481235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285398.1;locus_tag=D5F92_RS00795;product=toxic anion resistance protein;protein_id=WP_016481235.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 42645 43463 . - . ID=gene-D5F92_RS00800;Name=D5F92_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00800;old_locus_tag=D5F92_00805 NZ_QYTJ01000003.1 Protein Homology CDS 42645 43463 . - 0 ID=cds-WP_016503235.1;Parent=gene-D5F92_RS00800;Dbxref=GenBank:WP_016503235.1;Name=WP_016503235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239574.1;locus_tag=D5F92_RS00800;product=hypothetical protein;protein_id=WP_016503235.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 43587 45839 . - . ID=gene-D5F92_RS00805;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=D5F92_RS00805;old_locus_tag=D5F92_00810 NZ_QYTJ01000003.1 Protein Homology CDS 43587 45839 . - 0 ID=cds-WP_016481233.1;Parent=gene-D5F92_RS00805;Dbxref=GenBank:WP_016481233.1;Name=WP_016481233.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646239.1;locus_tag=D5F92_RS00805;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=WP_016481233.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 46009 46683 . - . ID=gene-D5F92_RS00810;Name=D5F92_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00810;old_locus_tag=D5F92_00815 NZ_QYTJ01000003.1 Protein Homology CDS 46009 46683 . - 0 ID=cds-WP_000356661.1;Parent=gene-D5F92_RS00810;Dbxref=GenBank:WP_000356661.1;Name=WP_000356661.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356657.1;locus_tag=D5F92_RS00810;product=helix-turn-helix transcriptional regulator;protein_id=WP_000356661.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq pseudogene 47045 48063 . + . ID=gene-D5F92_RS00815;Name=D5F92_RS00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00815;old_locus_tag=D5F92_00820;pseudo=true NZ_QYTJ01000003.1 Protein Homology CDS 47045 48063 . + 0 ID=cds-D5F92_RS00815;Parent=gene-D5F92_RS00815;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021299.1;locus_tag=D5F92_RS00815;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 48434 49726 . + . ID=gene-D5F92_RS00820;Name=D5F92_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00820;old_locus_tag=D5F92_00825 NZ_QYTJ01000003.1 Protein Homology CDS 48434 49726 . + 0 ID=cds-WP_016503232.1;Parent=gene-D5F92_RS00820;Dbxref=GenBank:WP_016503232.1;Name=WP_016503232.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205037.1;locus_tag=D5F92_RS00820;product=adenylosuccinate synthase;protein_id=WP_016503232.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq pseudogene 49749 50043 . - . ID=gene-D5F92_RS00825;Name=D5F92_RS00825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00825;old_locus_tag=D5F92_00830;pseudo=true NZ_QYTJ01000003.1 Protein Homology CDS 49749 50043 . - 0 ID=cds-D5F92_RS00825;Parent=gene-D5F92_RS00825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000600818.1;locus_tag=D5F92_RS00825;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 50202 51014 . - . ID=gene-D5F92_RS00830;Name=D5F92_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00830;old_locus_tag=D5F92_00835 NZ_QYTJ01000003.1 Protein Homology CDS 50202 51014 . - 0 ID=cds-WP_124785405.1;Parent=gene-D5F92_RS00830;Dbxref=GenBank:WP_124785405.1;Name=WP_124785405.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS00830;product=IS982 family transposase;protein_id=WP_124785405.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq pseudogene 51150 52666 . - . ID=gene-D5F92_RS00835;Name=D5F92_RS00835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00835;old_locus_tag=D5F92_00840;pseudo=true NZ_QYTJ01000003.1 Protein Homology CDS 51150 52666 . - 0 ID=cds-D5F92_RS00835;Parent=gene-D5F92_RS00835;Note=frameshifted;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222906.1;locus_tag=D5F92_RS00835;product=FGGY-family carbohydrate kinase;pseudo=true;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 52732 53721 . - . ID=gene-D5F92_RS00840;Name=D5F92_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00840;old_locus_tag=D5F92_00845 NZ_QYTJ01000003.1 Protein Homology CDS 52732 53721 . - 0 ID=cds-WP_124749541.1;Parent=gene-D5F92_RS00840;Dbxref=GenBank:WP_124749541.1;Name=WP_124749541.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503225.1;locus_tag=D5F92_RS00840;product=amidohydrolase family protein;protein_id=WP_124749541.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 53718 55139 . - . ID=gene-D5F92_RS00845;Name=D5F92_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00845;old_locus_tag=D5F92_00850 NZ_QYTJ01000003.1 Protein Homology CDS 53718 55139 . - 0 ID=cds-WP_124749543.1;Parent=gene-D5F92_RS00845;Dbxref=GenBank:WP_124749543.1;Name=WP_124749543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503226.1;locus_tag=D5F92_RS00845;product=PTS galactitol transporter subunit IIC;protein_id=WP_124749543.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 55237 56193 . - . ID=gene-D5F92_RS00850;Name=D5F92_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00850;old_locus_tag=D5F92_00855 NZ_QYTJ01000003.1 Protein Homology CDS 55237 56193 . - 0 ID=cds-WP_000358400.1;Parent=gene-D5F92_RS00850;Dbxref=GenBank:WP_000358400.1;Name=WP_000358400.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766789.1;locus_tag=D5F92_RS00850;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000358400.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 56212 57231 . - . ID=gene-D5F92_RS00855;Name=D5F92_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00855;old_locus_tag=D5F92_00860 NZ_QYTJ01000003.1 Protein Homology CDS 56212 57231 . - 0 ID=cds-WP_000700537.1;Parent=gene-D5F92_RS00855;Dbxref=GenBank:WP_000700537.1;Name=WP_000700537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700533.1;locus_tag=D5F92_RS00855;product=hypothetical protein;protein_id=WP_000700537.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 57466 58449 . - . ID=gene-D5F92_RS00860;Name=D5F92_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00860;old_locus_tag=D5F92_00865 NZ_QYTJ01000003.1 Protein Homology CDS 57466 58449 . - 0 ID=cds-WP_000462143.1;Parent=gene-D5F92_RS00860;Dbxref=GenBank:WP_000462143.1;Name=WP_000462143.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462136.1;locus_tag=D5F92_RS00860;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000462143.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 58612 59259 . - . ID=gene-D5F92_RS00865;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=D5F92_RS00865;old_locus_tag=D5F92_00870 NZ_QYTJ01000003.1 Protein Homology CDS 58612 59259 . - 0 ID=cds-WP_000873297.1;Parent=gene-D5F92_RS00865;Dbxref=GenBank:WP_000873297.1;Name=WP_000873297.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481225.1;locus_tag=D5F92_RS00865;product=fructose-6-phosphate aldolase;protein_id=WP_000873297.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 59270 59986 . - . ID=gene-D5F92_RS00870;Name=D5F92_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00870;old_locus_tag=D5F92_00875 NZ_QYTJ01000003.1 Protein Homology CDS 59270 59986 . - 0 ID=cds-WP_124749545.1;Parent=gene-D5F92_RS00870;Dbxref=GenBank:WP_124749545.1;Name=WP_124749545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934215.1;locus_tag=D5F92_RS00870;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_124749545.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 59988 60851 . - . ID=gene-D5F92_RS00875;Name=D5F92_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00875;old_locus_tag=D5F92_00880 NZ_QYTJ01000003.1 Protein Homology CDS 59988 60851 . - 0 ID=cds-WP_016503229.1;Parent=gene-D5F92_RS00875;Dbxref=GenBank:WP_016503229.1;Name=WP_016503229.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297181.1;locus_tag=D5F92_RS00875;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_016503229.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 60855 61520 . - . ID=gene-D5F92_RS00880;Name=D5F92_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00880;old_locus_tag=D5F92_00885 NZ_QYTJ01000003.1 Protein Homology CDS 60855 61520 . - 0 ID=cds-WP_016481227.1;Parent=gene-D5F92_RS00880;Dbxref=GenBank:WP_016481227.1;Name=WP_016481227.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166733.1;locus_tag=D5F92_RS00880;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016481227.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 61633 62118 . - . ID=gene-D5F92_RS00885;Name=D5F92_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00885;old_locus_tag=D5F92_00890 NZ_QYTJ01000003.1 Protein Homology CDS 61633 62118 . - 0 ID=cds-WP_016481228.1;Parent=gene-D5F92_RS00885;Dbxref=GenBank:WP_016481228.1;Name=WP_016481228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002267837.1;locus_tag=D5F92_RS00885;product=PTS sugar transporter subunit IIA;protein_id=WP_016481228.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 62185 62463 . - . ID=gene-D5F92_RS00890;Name=D5F92_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00890;old_locus_tag=D5F92_00895 NZ_QYTJ01000003.1 Protein Homology CDS 62185 62463 . - 0 ID=cds-WP_000241475.1;Parent=gene-D5F92_RS00890;Dbxref=GenBank:WP_000241475.1;Name=WP_000241475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241478.1;locus_tag=D5F92_RS00890;product=PTS sugar transporter subunit IIB;protein_id=WP_000241475.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 62491 63930 . - . ID=gene-D5F92_RS00895;Name=D5F92_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00895;old_locus_tag=D5F92_00900 NZ_QYTJ01000003.1 Protein Homology CDS 62491 63930 . - 0 ID=cds-WP_016481229.1;Parent=gene-D5F92_RS00895;Dbxref=GenBank:WP_016481229.1;Name=WP_016481229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427086.1;locus_tag=D5F92_RS00895;product=PTS sugar transporter subunit IIC;protein_id=WP_016481229.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq pseudogene 63951 65488 . - . ID=gene-D5F92_RS00900;Name=D5F92_RS00900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00900;old_locus_tag=D5F92_00905;pseudo=true NZ_QYTJ01000003.1 Protein Homology CDS 63951 65488 . - 0 ID=cds-D5F92_RS00900;Parent=gene-D5F92_RS00900;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057423.1;locus_tag=D5F92_RS00900;product=IS1182 family transposase;pseudo=true;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 65622 66239 . - . ID=gene-D5F92_RS00905;Name=D5F92_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00905;old_locus_tag=D5F92_00910 NZ_QYTJ01000003.1 Protein Homology CDS 65622 66239 . - 0 ID=cds-WP_001224528.1;Parent=gene-D5F92_RS00905;Dbxref=GenBank:WP_001224528.1;Name=WP_001224528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772020.1;locus_tag=D5F92_RS00905;product=hypothetical protein;protein_id=WP_001224528.1;transl_table=11 NZ_QYTJ01000003.1 RefSeq gene 66576 67384 . + . ID=gene-D5F92_RS00910;Name=D5F92_RS00910;end_range=67384,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00910;old_locus_tag=D5F92_00915;partial=true NZ_QYTJ01000003.1 Protein Homology CDS 66576 67384 . + 0 ID=cds-WP_124785407.1;Parent=gene-D5F92_RS00910;Dbxref=GenBank:WP_124785407.1;Name=WP_124785407.1;Ontology_term=GO:0004803;end_range=67384,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS00910;partial=true;product=IS982 family transposase;protein_id=WP_124785407.1;transl_table=11 ##sequence-region NZ_QYTJ01000030.1 1 1371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000030.1 RefSeq region 1 1371 . + . ID=NZ_QYTJ01000030.1:1..1371;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000030.1 RefSeq gene 1 125 . + . ID=gene-D5F92_RS06055;Name=D5F92_RS06055;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS06055;old_locus_tag=D5F92_06070;partial=true;start_range=.,1 NZ_QYTJ01000030.1 cmsearch rRNA 1 125 . + . ID=rna-D5F92_RS06055;Parent=gene-D5F92_RS06055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06055;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000030.1 cmsearch exon 1 125 . + . ID=exon-D5F92_RS06055-1;Parent=rna-D5F92_RS06055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06055;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000030.1 RefSeq gene 200 315 . + . ID=gene-D5F92_RS06060;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS06060;old_locus_tag=D5F92_06075 NZ_QYTJ01000030.1 cmsearch rRNA 200 315 . + . ID=rna-D5F92_RS06060;Parent=gene-D5F92_RS06060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06060;product=5S ribosomal RNA NZ_QYTJ01000030.1 cmsearch exon 200 315 . + . ID=exon-D5F92_RS06060-1;Parent=rna-D5F92_RS06060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS06060;product=5S ribosomal RNA NZ_QYTJ01000030.1 RefSeq gene 319 391 . + . ID=gene-D5F92_RS06065;Name=D5F92_RS06065;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06065;old_locus_tag=D5F92_06080 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 319 391 . + . ID=rna-D5F92_RS06065;Parent=gene-D5F92_RS06065;anticodon=(pos:352..354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06065;product=tRNA-Val NZ_QYTJ01000030.1 tRNAscan-SE exon 319 391 . + . ID=exon-D5F92_RS06065-1;Parent=rna-D5F92_RS06065;anticodon=(pos:352..354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06065;product=tRNA-Val NZ_QYTJ01000030.1 RefSeq gene 394 466 . + . ID=gene-D5F92_RS06070;Name=D5F92_RS06070;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06070;old_locus_tag=D5F92_06085 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 394 466 . + . ID=rna-D5F92_RS06070;Parent=gene-D5F92_RS06070;anticodon=(pos:427..429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06070;product=tRNA-Asp NZ_QYTJ01000030.1 tRNAscan-SE exon 394 466 . + . ID=exon-D5F92_RS06070-1;Parent=rna-D5F92_RS06070;anticodon=(pos:427..429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06070;product=tRNA-Asp NZ_QYTJ01000030.1 RefSeq gene 469 541 . + . ID=gene-D5F92_RS06075;Name=D5F92_RS06075;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06075;old_locus_tag=D5F92_06090 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 469 541 . + . ID=rna-D5F92_RS06075;Parent=gene-D5F92_RS06075;anticodon=(pos:502..504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06075;product=tRNA-Lys NZ_QYTJ01000030.1 tRNAscan-SE exon 469 541 . + . ID=exon-D5F92_RS06075-1;Parent=rna-D5F92_RS06075;anticodon=(pos:502..504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06075;product=tRNA-Lys NZ_QYTJ01000030.1 RefSeq gene 551 632 . + . ID=gene-D5F92_RS06080;Name=D5F92_RS06080;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06080;old_locus_tag=D5F92_06095 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 551 632 . + . ID=rna-D5F92_RS06080;Parent=gene-D5F92_RS06080;anticodon=(pos:585..587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06080;product=tRNA-Leu NZ_QYTJ01000030.1 tRNAscan-SE exon 551 632 . + . ID=exon-D5F92_RS06080-1;Parent=rna-D5F92_RS06080;anticodon=(pos:585..587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06080;product=tRNA-Leu NZ_QYTJ01000030.1 RefSeq gene 643 715 . + . ID=gene-D5F92_RS06085;Name=D5F92_RS06085;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06085;old_locus_tag=D5F92_06100 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 643 715 . + . ID=rna-D5F92_RS06085;Parent=gene-D5F92_RS06085;anticodon=(pos:676..678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06085;product=tRNA-Thr NZ_QYTJ01000030.1 tRNAscan-SE exon 643 715 . + . ID=exon-D5F92_RS06085-1;Parent=rna-D5F92_RS06085;anticodon=(pos:676..678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06085;product=tRNA-Thr NZ_QYTJ01000030.1 RefSeq gene 744 817 . + . ID=gene-D5F92_RS06090;Name=D5F92_RS06090;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06090;old_locus_tag=D5F92_06105 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 744 817 . + . ID=rna-D5F92_RS06090;Parent=gene-D5F92_RS06090;anticodon=(pos:778..780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06090;product=tRNA-Ile NZ_QYTJ01000030.1 tRNAscan-SE exon 744 817 . + . ID=exon-D5F92_RS06090-1;Parent=rna-D5F92_RS06090;anticodon=(pos:778..780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06090;product=tRNA-Ile NZ_QYTJ01000030.1 RefSeq gene 828 899 . + . ID=gene-D5F92_RS06095;Name=D5F92_RS06095;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06095;old_locus_tag=D5F92_06110 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 828 899 . + . ID=rna-D5F92_RS06095;Parent=gene-D5F92_RS06095;anticodon=(pos:861..863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06095;product=tRNA-Glu NZ_QYTJ01000030.1 tRNAscan-SE exon 828 899 . + . ID=exon-D5F92_RS06095-1;Parent=rna-D5F92_RS06095;anticodon=(pos:861..863);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06095;product=tRNA-Glu NZ_QYTJ01000030.1 RefSeq gene 913 1002 . + . ID=gene-D5F92_RS06100;Name=D5F92_RS06100;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06100;old_locus_tag=D5F92_06115 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 913 1002 . + . ID=rna-D5F92_RS06100;Parent=gene-D5F92_RS06100;anticodon=(pos:949..951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06100;product=tRNA-Ser NZ_QYTJ01000030.1 tRNAscan-SE exon 913 1002 . + . ID=exon-D5F92_RS06100-1;Parent=rna-D5F92_RS06100;anticodon=(pos:949..951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06100;product=tRNA-Ser NZ_QYTJ01000030.1 RefSeq gene 1013 1086 . + . ID=gene-D5F92_RS06105;Name=D5F92_RS06105;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06105;old_locus_tag=D5F92_06120 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 1013 1086 . + . ID=rna-D5F92_RS06105;Parent=gene-D5F92_RS06105;anticodon=(pos:1047..1049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06105;product=tRNA-Met NZ_QYTJ01000030.1 tRNAscan-SE exon 1013 1086 . + . ID=exon-D5F92_RS06105-1;Parent=rna-D5F92_RS06105;anticodon=(pos:1047..1049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06105;product=tRNA-Met NZ_QYTJ01000030.1 RefSeq gene 1089 1161 . + . ID=gene-D5F92_RS06110;Name=D5F92_RS06110;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06110;old_locus_tag=D5F92_06125 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 1089 1161 . + . ID=rna-D5F92_RS06110;Parent=gene-D5F92_RS06110;anticodon=(pos:1122..1124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06110;product=tRNA-Phe NZ_QYTJ01000030.1 tRNAscan-SE exon 1089 1161 . + . ID=exon-D5F92_RS06110-1;Parent=rna-D5F92_RS06110;anticodon=(pos:1122..1124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06110;product=tRNA-Phe NZ_QYTJ01000030.1 RefSeq gene 1173 1253 . + . ID=gene-D5F92_RS06115;Name=D5F92_RS06115;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06115;old_locus_tag=D5F92_06130 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 1173 1253 . + . ID=rna-D5F92_RS06115;Parent=gene-D5F92_RS06115;anticodon=(pos:1207..1209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06115;product=tRNA-Tyr NZ_QYTJ01000030.1 tRNAscan-SE exon 1173 1253 . + . ID=exon-D5F92_RS06115-1;Parent=rna-D5F92_RS06115;anticodon=(pos:1207..1209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06115;product=tRNA-Tyr NZ_QYTJ01000030.1 RefSeq gene 1260 1330 . + . ID=gene-D5F92_RS06120;Name=D5F92_RS06120;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS06120;old_locus_tag=D5F92_06135 NZ_QYTJ01000030.1 tRNAscan-SE tRNA 1260 1330 . + . ID=rna-D5F92_RS06120;Parent=gene-D5F92_RS06120;anticodon=(pos:1292..1294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06120;product=tRNA-Trp NZ_QYTJ01000030.1 tRNAscan-SE exon 1260 1330 . + . ID=exon-D5F92_RS06120-1;Parent=rna-D5F92_RS06120;anticodon=(pos:1292..1294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS06120;product=tRNA-Trp ##sequence-region NZ_QYTJ01000031.1 1 127323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000031.1 RefSeq region 1 127323 . + . ID=NZ_QYTJ01000031.1:1..127323;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000031.1 RefSeq gene 246 488 . + . ID=gene-D5F92_RS06130;Name=D5F92_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06130;old_locus_tag=D5F92_06145 NZ_QYTJ01000031.1 Protein Homology CDS 246 488 . + 0 ID=cds-WP_223297784.1;Parent=gene-D5F92_RS06130;Dbxref=GenBank:WP_223297784.1;Name=WP_223297784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926392.1;locus_tag=D5F92_RS06130;product=DUF4176 domain-containing protein;protein_id=WP_223297784.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 1415 1975 . + . ID=gene-D5F92_RS06145;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=D5F92_RS06145;old_locus_tag=D5F92_06160 NZ_QYTJ01000031.1 Protein Homology CDS 1415 1975 . + 0 ID=cds-WP_000568636.1;Parent=gene-D5F92_RS06145;Dbxref=GenBank:WP_000568636.1;Name=WP_000568636.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=D5F92_RS06145;product=elongation factor P;protein_id=WP_000568636.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 2064 2453 . + . ID=gene-D5F92_RS06150;Name=D5F92_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06150;old_locus_tag=D5F92_06165 NZ_QYTJ01000031.1 Protein Homology CDS 2064 2453 . + 0 ID=cds-WP_000206139.1;Parent=gene-D5F92_RS06150;Dbxref=GenBank:WP_000206139.1;Name=WP_000206139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335250.1;locus_tag=D5F92_RS06150;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_000206139.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 2446 2880 . + . ID=gene-D5F92_RS06155;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=D5F92_RS06155;old_locus_tag=D5F92_06170 NZ_QYTJ01000031.1 Protein Homology CDS 2446 2880 . + 0 ID=cds-WP_016503165.1;Parent=gene-D5F92_RS06155;Dbxref=GenBank:WP_016503165.1;Name=WP_016503165.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204941.1;locus_tag=D5F92_RS06155;product=transcription antitermination factor NusB;protein_id=WP_016503165.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 2964 3926 . - . ID=gene-D5F92_RS06160;Name=D5F92_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06160;old_locus_tag=D5F92_06175 NZ_QYTJ01000031.1 Protein Homology CDS 2964 3926 . - 0 ID=cds-WP_000225972.1;Parent=gene-D5F92_RS06160;Dbxref=GenBank:WP_000225972.1;Name=WP_000225972.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225970.1;locus_tag=D5F92_RS06160;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000225972.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 3928 5367 . - . ID=gene-D5F92_RS06165;Name=D5F92_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06165;old_locus_tag=D5F92_06180 NZ_QYTJ01000031.1 Protein Homology CDS 3928 5367 . - 0 ID=cds-WP_016503164.1;Parent=gene-D5F92_RS06165;Dbxref=GenBank:WP_016503164.1;Name=WP_016503164.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053047.1;locus_tag=D5F92_RS06165;product=sucrose-6-phosphate hydrolase;protein_id=WP_016503164.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 5552 7471 . + . ID=gene-D5F92_RS06170;Name=D5F92_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06170;old_locus_tag=D5F92_06185 NZ_QYTJ01000031.1 Protein Homology CDS 5552 7471 . + 0 ID=cds-WP_016503163.1;Parent=gene-D5F92_RS06170;Dbxref=GenBank:WP_016503163.1;Name=WP_016503163.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645604.1;locus_tag=D5F92_RS06170;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_016503163.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq pseudogene 7539 8233 . + . ID=gene-D5F92_RS06175;Name=D5F92_RS06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06175;old_locus_tag=D5F92_06190;pseudo=true NZ_QYTJ01000031.1 Protein Homology CDS 7539 8233 . + 0 ID=cds-D5F92_RS06175;Parent=gene-D5F92_RS06175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646443.1;locus_tag=D5F92_RS06175;product=ROK family protein;pseudo=true;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 8351 9298 . + . ID=gene-D5F92_RS06180;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=D5F92_RS06180;old_locus_tag=D5F92_06195 NZ_QYTJ01000031.1 Protein Homology CDS 8351 9298 . + 0 ID=cds-WP_124749130.1;Parent=gene-D5F92_RS06180;Dbxref=GenBank:WP_124749130.1;Name=WP_124749130.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294260.1;locus_tag=D5F92_RS06180;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_124749130.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 9407 11935 . + . ID=gene-D5F92_RS06185;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=D5F92_RS06185;old_locus_tag=D5F92_06200 NZ_QYTJ01000031.1 Protein Homology CDS 9407 11935 . + 0 ID=cds-WP_016503159.1;Parent=gene-D5F92_RS06185;Dbxref=GenBank:WP_016503159.1;Name=WP_016503159.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648626.1;locus_tag=D5F92_RS06185;product=preprotein translocase subunit SecA;protein_id=WP_016503159.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 12061 13068 . + . ID=gene-D5F92_RS06190;Name=D5F92_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06190;old_locus_tag=D5F92_06205 NZ_QYTJ01000031.1 Protein Homology CDS 12061 13068 . + 0 ID=cds-WP_086163474.1;Parent=gene-D5F92_RS06190;Dbxref=GenBank:WP_086163474.1;Name=WP_086163474.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285097.1;locus_tag=D5F92_RS06190;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_086163474.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 13093 13452 . + . ID=gene-D5F92_RS06195;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=D5F92_RS06195;old_locus_tag=D5F92_06210 NZ_QYTJ01000031.1 Protein Homology CDS 13093 13452 . + 0 ID=cds-WP_000635015.1;Parent=gene-D5F92_RS06195;Dbxref=GenBank:WP_000635015.1;Name=WP_000635015.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635015.1;locus_tag=D5F92_RS06195;product=holo-ACP synthase;protein_id=WP_000635015.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 13449 14549 . + . ID=gene-D5F92_RS06200;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=D5F92_RS06200;old_locus_tag=D5F92_06215 NZ_QYTJ01000031.1 Protein Homology CDS 13449 14549 . + 0 ID=cds-WP_000625946.1;Parent=gene-D5F92_RS06200;Dbxref=GenBank:WP_000625946.1;Name=WP_000625946.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625941.1;locus_tag=D5F92_RS06200;product=alanine racemase;protein_id=WP_000625946.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 14642 16180 . + . ID=gene-D5F92_RS06205;Name=D5F92_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06205;old_locus_tag=D5F92_06220 NZ_QYTJ01000031.1 Protein Homology CDS 14642 16180 . + 0 ID=cds-WP_124785491.1;Parent=gene-D5F92_RS06205;Dbxref=GenBank:WP_124785491.1;Name=WP_124785491.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649924.1;locus_tag=D5F92_RS06205;product=CHAP domain-containing protein;protein_id=WP_124785491.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 16260 18275 . + . ID=gene-D5F92_RS06210;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=D5F92_RS06210;old_locus_tag=D5F92_06225 NZ_QYTJ01000031.1 Protein Homology CDS 16260 18275 . + 0 ID=cds-WP_086163472.1;Parent=gene-D5F92_RS06210;Dbxref=GenBank:WP_086163472.1;Name=WP_086163472.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926642.1;locus_tag=D5F92_RS06210;product=ATP-dependent DNA helicase RecG;protein_id=WP_086163472.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 18566 19480 . + . ID=gene-D5F92_RS06215;Name=D5F92_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06215;old_locus_tag=D5F92_06230 NZ_QYTJ01000031.1 Protein Homology CDS 18566 19480 . + 0 ID=cds-WP_016503154.1;Parent=gene-D5F92_RS06215;Dbxref=GenBank:WP_016503154.1;Name=WP_016503154.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503154.1;locus_tag=D5F92_RS06215;product=aldo/keto reductase;protein_id=WP_016503154.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 19578 20456 . + . ID=gene-D5F92_RS06220;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=D5F92_RS06220;old_locus_tag=D5F92_06235 NZ_QYTJ01000031.1 Protein Homology CDS 19578 20456 . + 0 ID=cds-WP_001086864.1;Parent=gene-D5F92_RS06220;Dbxref=GenBank:WP_001086864.1;Name=WP_001086864.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481154.1;locus_tag=D5F92_RS06220;product=shikimate dehydrogenase;protein_id=WP_001086864.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 20491 21453 . - . ID=gene-D5F92_RS06225;Name=D5F92_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06225;old_locus_tag=D5F92_06240 NZ_QYTJ01000031.1 Protein Homology CDS 20491 21453 . - 0 ID=cds-WP_000723060.1;Parent=gene-D5F92_RS06225;Dbxref=GenBank:WP_000723060.1;Name=WP_000723060.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643115.1;locus_tag=D5F92_RS06225;product=asparaginase;protein_id=WP_000723060.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 21522 22904 . + . ID=gene-D5F92_RS06230;Name=D5F92_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06230;old_locus_tag=D5F92_06245 NZ_QYTJ01000031.1 Protein Homology CDS 21522 22904 . + 0 ID=cds-WP_016503151.1;Parent=gene-D5F92_RS06230;Dbxref=GenBank:WP_016503151.1;Name=WP_016503151.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503151.1;locus_tag=D5F92_RS06230;product=HAD-IIB family hydrolase;protein_id=WP_016503151.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 22960 23412 . - . ID=gene-D5F92_RS06235;Name=D5F92_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06235;old_locus_tag=D5F92_06250 NZ_QYTJ01000031.1 Protein Homology CDS 22960 23412 . - 0 ID=cds-WP_000080032.1;Parent=gene-D5F92_RS06235;Dbxref=GenBank:WP_000080032.1;Name=WP_000080032.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080031.1;locus_tag=D5F92_RS06235;product=universal stress protein;protein_id=WP_000080032.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 23679 24890 . + . ID=gene-D5F92_RS06240;Name=D5F92_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06240;old_locus_tag=D5F92_06255 NZ_QYTJ01000031.1 Protein Homology CDS 23679 24890 . + 0 ID=cds-WP_000688108.1;Parent=gene-D5F92_RS06240;Dbxref=GenBank:WP_000688108.1;Name=WP_000688108.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836593.1;locus_tag=D5F92_RS06240;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000688108.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 25016 25801 . + . ID=gene-D5F92_RS06245;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=D5F92_RS06245;old_locus_tag=D5F92_06260 NZ_QYTJ01000031.1 Protein Homology CDS 25016 25801 . + 0 ID=cds-WP_001133183.1;Parent=gene-D5F92_RS06245;Dbxref=GenBank:WP_001133183.1;Name=WP_001133183.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700,GO:0005525;gbkey=CDS;gene=codY;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,GTP binding|0005525||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133183.1;locus_tag=D5F92_RS06245;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_001133183.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 25868 26416 . + . ID=gene-D5F92_RS06250;Name=D5F92_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06250;old_locus_tag=D5F92_06265 NZ_QYTJ01000031.1 Protein Homology CDS 25868 26416 . + 0 ID=cds-WP_016503150.1;Parent=gene-D5F92_RS06250;Dbxref=GenBank:WP_016503150.1;Name=WP_016503150.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503150.1;locus_tag=D5F92_RS06250;product=cysteine hydrolase family protein;protein_id=WP_016503150.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 26463 27428 . - . ID=gene-D5F92_RS06255;Name=D5F92_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06255;old_locus_tag=D5F92_06270 NZ_QYTJ01000031.1 Protein Homology CDS 26463 27428 . - 0 ID=cds-WP_016503149.1;Parent=gene-D5F92_RS06255;Dbxref=GenBank:WP_016503149.1;Name=WP_016503149.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481150.1;locus_tag=D5F92_RS06255;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_016503149.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 27616 28245 . + . ID=gene-D5F92_RS06260;Name=D5F92_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06260;old_locus_tag=D5F92_06275 NZ_QYTJ01000031.1 Protein Homology CDS 27616 28245 . + 0 ID=cds-WP_011074751.1;Parent=gene-D5F92_RS06260;Dbxref=GenBank:WP_011074751.1;Name=WP_011074751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074751.1;locus_tag=D5F92_RS06260;product=helix-turn-helix transcriptional regulator;protein_id=WP_011074751.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 28256 29110 . + . ID=gene-D5F92_RS06265;Name=D5F92_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06265;old_locus_tag=D5F92_06280 NZ_QYTJ01000031.1 Protein Homology CDS 28256 29110 . + 0 ID=cds-WP_016503148.1;Parent=gene-D5F92_RS06265;Dbxref=GenBank:WP_016503148.1;Name=WP_016503148.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503148.1;locus_tag=D5F92_RS06265;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_016503148.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 29100 31745 . + . ID=gene-D5F92_RS06270;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=D5F92_RS06270;old_locus_tag=D5F92_06285 NZ_QYTJ01000031.1 Protein Homology CDS 29100 31745 . + 0 ID=cds-WP_086163469.1;Parent=gene-D5F92_RS06270;Dbxref=GenBank:WP_086163469.1;Name=WP_086163469.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632219.1;locus_tag=D5F92_RS06270;product=pyruvate%2C phosphate dikinase;protein_id=WP_086163469.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 31883 32185 . + . ID=gene-D5F92_RS06275;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=D5F92_RS06275;old_locus_tag=D5F92_06290 NZ_QYTJ01000031.1 Protein Homology CDS 31883 32185 . + 0 ID=cds-WP_000703033.1;Parent=gene-D5F92_RS06275;Dbxref=GenBank:WP_000703033.1;Name=WP_000703033.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147946.1;locus_tag=D5F92_RS06275;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_000703033.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 32185 33651 . + . ID=gene-D5F92_RS06280;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=D5F92_RS06280;old_locus_tag=D5F92_06295 NZ_QYTJ01000031.1 Protein Homology CDS 32185 33651 . + 0 ID=cds-WP_086163468.1;Parent=gene-D5F92_RS06280;Dbxref=GenBank:WP_086163468.1;Name=WP_086163468.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295200.1;locus_tag=D5F92_RS06280;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_086163468.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 33651 35093 . + . ID=gene-D5F92_RS06285;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=D5F92_RS06285;old_locus_tag=D5F92_06300 NZ_QYTJ01000031.1 Protein Homology CDS 33651 35093 . + 0 ID=cds-WP_001008627.1;Parent=gene-D5F92_RS06285;Dbxref=GenBank:WP_001008627.1;Name=WP_001008627.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946582.1;locus_tag=D5F92_RS06285;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_001008627.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 35223 36137 . + . ID=gene-D5F92_RS06290;Name=D5F92_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06290;old_locus_tag=D5F92_06305 NZ_QYTJ01000031.1 Protein Homology CDS 35223 36137 . + 0 ID=cds-WP_124749439.1;Parent=gene-D5F92_RS06290;Dbxref=GenBank:WP_124749439.1;Name=WP_124749439.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161968.1;locus_tag=D5F92_RS06290;product=DMT family transporter;protein_id=WP_124749439.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 36254 36781 . + . ID=gene-D5F92_RS06295;Name=D5F92_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06295;old_locus_tag=D5F92_06310 NZ_QYTJ01000031.1 Protein Homology CDS 36254 36781 . + 0 ID=cds-WP_000020580.1;Parent=gene-D5F92_RS06295;Dbxref=GenBank:WP_000020580.1;Name=WP_000020580.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612026.1;locus_tag=D5F92_RS06295;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_000020580.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 36781 37899 . + . ID=gene-D5F92_RS06300;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=D5F92_RS06300;old_locus_tag=D5F92_06315 NZ_QYTJ01000031.1 Protein Homology CDS 36781 37899 . + 0 ID=cds-WP_016503143.1;Parent=gene-D5F92_RS06300;Dbxref=GenBank:WP_016503143.1;Name=WP_016503143.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018363769.1;locus_tag=D5F92_RS06300;product=ribosome biogenesis GTPase YqeH;protein_id=WP_016503143.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 37992 38309 . + . ID=gene-D5F92_RS06305;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=D5F92_RS06305;old_locus_tag=D5F92_06320 NZ_QYTJ01000031.1 Protein Homology CDS 37992 38309 . + 0 ID=cds-WP_000958132.1;Parent=gene-D5F92_RS06305;Dbxref=GenBank:WP_000958132.1;Name=WP_000958132.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058732.1;locus_tag=D5F92_RS06305;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_000958132.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 38439 39071 . + . ID=gene-D5F92_RS06310;Name=D5F92_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06310;old_locus_tag=D5F92_06325 NZ_QYTJ01000031.1 Protein Homology CDS 38439 39071 . + 0 ID=cds-WP_001162767.1;Parent=gene-D5F92_RS06310;Dbxref=GenBank:WP_001162767.1;Name=WP_001162767.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002313156.1;locus_tag=D5F92_RS06310;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001162767.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 39068 39655 . + . ID=gene-D5F92_RS06315;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=D5F92_RS06315;old_locus_tag=D5F92_06330 NZ_QYTJ01000031.1 Protein Homology CDS 39068 39655 . + 0 ID=cds-WP_016503142.1;Parent=gene-D5F92_RS06315;Dbxref=GenBank:WP_016503142.1;Name=WP_016503142.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649401.1;locus_tag=D5F92_RS06315;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_016503142.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq pseudogene 39719 40240 . + . ID=gene-D5F92_RS06320;Name=D5F92_RS06320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06320;old_locus_tag=D5F92_06335;pseudo=true NZ_QYTJ01000031.1 Protein Homology CDS 39719 40240 . + 0 ID=cds-D5F92_RS06320;Parent=gene-D5F92_RS06320;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128172.1;locus_tag=D5F92_RS06320;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 40242 40598 . + . ID=gene-D5F92_RS06325;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=D5F92_RS06325;old_locus_tag=D5F92_06340 NZ_QYTJ01000031.1 Protein Homology CDS 40242 40598 . + 0 ID=cds-WP_000136423.1;Parent=gene-D5F92_RS06325;Dbxref=GenBank:WP_000136423.1;Name=WP_000136423.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136425.1;locus_tag=D5F92_RS06325;product=ribosome silencing factor;protein_id=WP_000136423.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 40664 41398 . + . ID=gene-D5F92_RS06330;Name=D5F92_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06330;old_locus_tag=D5F92_06345 NZ_QYTJ01000031.1 Protein Homology CDS 40664 41398 . + 0 ID=cds-WP_000257075.1;Parent=gene-D5F92_RS06330;Dbxref=GenBank:WP_000257075.1;Name=WP_000257075.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257057.1;locus_tag=D5F92_RS06330;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_000257075.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 41421 41672 . + . ID=gene-D5F92_RS06335;Name=D5F92_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06335;old_locus_tag=D5F92_06350 NZ_QYTJ01000031.1 Protein Homology CDS 41421 41672 . + 0 ID=cds-WP_000583229.1;Parent=gene-D5F92_RS06335;Dbxref=GenBank:WP_000583229.1;Name=WP_000583229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583227.1;locus_tag=D5F92_RS06335;product=hypothetical protein;protein_id=WP_000583229.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 41669 42778 . + . ID=gene-D5F92_RS06340;Name=D5F92_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06340;old_locus_tag=D5F92_06355 NZ_QYTJ01000031.1 Protein Homology CDS 41669 42778 . + 0 ID=cds-WP_016503141.1;Parent=gene-D5F92_RS06340;Dbxref=GenBank:WP_016503141.1;Name=WP_016503141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503141.1;locus_tag=D5F92_RS06340;product=nucleotidyltransferase;protein_id=WP_016503141.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq pseudogene 42871 43582 . + . ID=gene-D5F92_RS06345;Name=D5F92_RS06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06345;old_locus_tag=D5F92_06360;pseudo=true NZ_QYTJ01000031.1 Protein Homology CDS 42871 43582 . + 0 ID=cds-D5F92_RS06345;Parent=gene-D5F92_RS06345;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859551.1;locus_tag=D5F92_RS06345;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 43721 44125 . + . ID=gene-D5F92_RS06350;Name=D5F92_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06350;old_locus_tag=D5F92_06365 NZ_QYTJ01000031.1 Protein Homology CDS 43721 44125 . + 0 ID=cds-WP_000675691.1;Parent=gene-D5F92_RS06350;Dbxref=GenBank:WP_000675691.1;Name=WP_000675691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675692.1;locus_tag=D5F92_RS06350;product=cupin domain-containing protein;protein_id=WP_000675691.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 44391 45104 . - . ID=gene-D5F92_RS06355;Name=D5F92_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06355;old_locus_tag=D5F92_06370 NZ_QYTJ01000031.1 Protein Homology CDS 44391 45104 . - 0 ID=cds-WP_016503138.1;Parent=gene-D5F92_RS06355;Dbxref=GenBank:WP_016503138.1;Name=WP_016503138.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767547.1;locus_tag=D5F92_RS06355;product=MIP/aquaporin family protein;protein_id=WP_016503138.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 45114 45488 . - . ID=gene-D5F92_RS06360;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=D5F92_RS06360;old_locus_tag=D5F92_06375 NZ_QYTJ01000031.1 Protein Homology CDS 45114 45488 . - 0 ID=cds-WP_001279899.1;Parent=gene-D5F92_RS06360;Dbxref=GenBank:WP_001279899.1;Name=WP_001279899.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960428.1;locus_tag=D5F92_RS06360;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001279899.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 45488 46066 . - . ID=gene-D5F92_RS06365;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=D5F92_RS06365;old_locus_tag=D5F92_06380 NZ_QYTJ01000031.1 Protein Homology CDS 45488 46066 . - 0 ID=cds-WP_000453281.1;Parent=gene-D5F92_RS06365;Dbxref=GenBank:WP_000453281.1;Name=WP_000453281.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453283.1;locus_tag=D5F92_RS06365;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000453281.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 46104 47093 . - . ID=gene-D5F92_RS06370;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=D5F92_RS06370;old_locus_tag=D5F92_06385 NZ_QYTJ01000031.1 Protein Homology CDS 46104 47093 . - 0 ID=cds-WP_016481138.1;Parent=gene-D5F92_RS06370;Dbxref=GenBank:WP_016481138.1;Name=WP_016481138.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722658.1;locus_tag=D5F92_RS06370;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_016481138.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 47267 47803 . + . ID=gene-D5F92_RS06380;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=D5F92_RS06380;old_locus_tag=D5F92_06395 NZ_QYTJ01000031.1 Protein Homology CDS 47267 47803 . + 0 ID=cds-WP_000204281.1;Parent=gene-D5F92_RS06380;Dbxref=GenBank:WP_000204281.1;Name=WP_000204281.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643895.1;locus_tag=D5F92_RS06380;product=dihydroxyacetone kinase transcriptional activator DhaS;protein_id=WP_000204281.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 47813 48799 . + . ID=gene-D5F92_RS06385;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=D5F92_RS06385;old_locus_tag=D5F92_06400 NZ_QYTJ01000031.1 Protein Homology CDS 47813 48799 . + 0 ID=cds-WP_001232461.1;Parent=gene-D5F92_RS06385;Dbxref=GenBank:WP_001232461.1;Name=WP_001232461.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaQ;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285056.1;locus_tag=D5F92_RS06385;product=DhaKLM operon coactivator DhaQ;protein_id=WP_001232461.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 48917 49633 . + . ID=gene-D5F92_RS06395;Name=D5F92_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06395;old_locus_tag=D5F92_06410 NZ_QYTJ01000031.1 Protein Homology CDS 48917 49633 . + 0 ID=cds-WP_016503133.1;Parent=gene-D5F92_RS06395;Dbxref=GenBank:WP_016503133.1;Name=WP_016503133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088325.1;locus_tag=D5F92_RS06395;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_016503133.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 49788 50477 . + . ID=gene-D5F92_RS06405;Name=D5F92_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06405;old_locus_tag=D5F92_06420 NZ_QYTJ01000031.1 Protein Homology CDS 49788 50477 . + 0 ID=cds-WP_000956422.1;Parent=gene-D5F92_RS06405;Dbxref=GenBank:WP_000956422.1;Name=WP_000956422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956417.1;locus_tag=D5F92_RS06405;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_000956422.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 50548 51411 . + . ID=gene-D5F92_RS06410;Name=D5F92_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06410;old_locus_tag=D5F92_06425 NZ_QYTJ01000031.1 Protein Homology CDS 50548 51411 . + 0 ID=cds-WP_124749443.1;Parent=gene-D5F92_RS06410;Dbxref=GenBank:WP_124749443.1;Name=WP_124749443.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046727.1;locus_tag=D5F92_RS06410;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_124749443.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 51553 52377 . + . ID=gene-D5F92_RS06415;Name=D5F92_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06415;old_locus_tag=D5F92_06430 NZ_QYTJ01000031.1 Protein Homology CDS 51553 52377 . + 0 ID=cds-WP_016503131.1;Parent=gene-D5F92_RS06415;Dbxref=GenBank:WP_016503131.1;Name=WP_016503131.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543698.1;locus_tag=D5F92_RS06415;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_016503131.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 52511 53887 . + . ID=gene-D5F92_RS06420;Name=D5F92_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06420;old_locus_tag=D5F92_06435 NZ_QYTJ01000031.1 Protein Homology CDS 52511 53887 . + 0 ID=cds-WP_000176655.1;Parent=gene-D5F92_RS06420;Dbxref=GenBank:WP_000176655.1;Name=WP_000176655.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176659.1;locus_tag=D5F92_RS06420;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_000176655.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 53880 54950 . + . ID=gene-D5F92_RS06425;Name=D5F92_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06425;old_locus_tag=D5F92_06440 NZ_QYTJ01000031.1 Protein Homology CDS 53880 54950 . + 0 ID=cds-WP_000032379.1;Parent=gene-D5F92_RS06425;Dbxref=GenBank:WP_000032379.1;Name=WP_000032379.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032379.1;locus_tag=D5F92_RS06425;product=methionine ABC transporter ATP-binding protein;protein_id=WP_000032379.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 54947 55639 . + . ID=gene-D5F92_RS06430;Name=D5F92_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06430;old_locus_tag=D5F92_06445 NZ_QYTJ01000031.1 Protein Homology CDS 54947 55639 . + 0 ID=cds-WP_000574037.1;Parent=gene-D5F92_RS06430;Dbxref=GenBank:WP_000574037.1;Name=WP_000574037.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574038.1;locus_tag=D5F92_RS06430;product=methionine ABC transporter permease;protein_id=WP_000574037.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 55688 56743 . - . ID=gene-D5F92_RS06435;Name=D5F92_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06435;old_locus_tag=D5F92_06450 NZ_QYTJ01000031.1 Protein Homology CDS 55688 56743 . - 0 ID=cds-WP_016503130.1;Parent=gene-D5F92_RS06435;Dbxref=GenBank:WP_016503130.1;Name=WP_016503130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632209.1;locus_tag=D5F92_RS06435;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_016503130.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 56857 58224 . - . ID=gene-D5F92_RS06440;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D5F92_RS06440;old_locus_tag=D5F92_06455 NZ_QYTJ01000031.1 Protein Homology CDS 56857 58224 . - 0 ID=cds-WP_086163465.1;Parent=gene-D5F92_RS06440;Dbxref=GenBank:WP_086163465.1;Name=WP_086163465.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769341.1;locus_tag=D5F92_RS06440;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_086163465.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 58400 59608 . + . ID=gene-D5F92_RS06445;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=D5F92_RS06445;old_locus_tag=D5F92_06460 NZ_QYTJ01000031.1 Protein Homology CDS 58400 59608 . + 0 ID=cds-WP_000819590.1;Parent=gene-D5F92_RS06445;Dbxref=GenBank:WP_000819590.1;Name=WP_000819590.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819595.1;locus_tag=D5F92_RS06445;product=serine/threonine transporter SstT;protein_id=WP_000819590.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 59777 60325 . + . ID=gene-D5F92_RS06450;Name=D5F92_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06450;old_locus_tag=D5F92_06465 NZ_QYTJ01000031.1 Protein Homology CDS 59777 60325 . + 0 ID=cds-WP_001095696.1;Parent=gene-D5F92_RS06450;Dbxref=GenBank:WP_001095696.1;Name=WP_001095696.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095696.1;locus_tag=D5F92_RS06450;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=WP_001095696.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 60342 62018 . + . ID=gene-D5F92_RS06455;Name=D5F92_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06455;old_locus_tag=D5F92_06470 NZ_QYTJ01000031.1 Protein Homology CDS 60342 62018 . + 0 ID=cds-WP_000651257.1;Parent=gene-D5F92_RS06455;Dbxref=GenBank:WP_000651257.1;Name=WP_000651257.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651253.1;locus_tag=D5F92_RS06455;product=ABC transporter ATP-binding protein;protein_id=WP_000651257.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 62011 62841 . + . ID=gene-D5F92_RS06460;Name=D5F92_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06460;old_locus_tag=D5F92_06475 NZ_QYTJ01000031.1 Protein Homology CDS 62011 62841 . + 0 ID=cds-WP_016503127.1;Parent=gene-D5F92_RS06460;Dbxref=GenBank:WP_016503127.1;Name=WP_016503127.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503127.1;locus_tag=D5F92_RS06460;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_016503127.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 62876 63547 . - . ID=gene-D5F92_RS06465;Name=D5F92_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06465;old_locus_tag=D5F92_06480 NZ_QYTJ01000031.1 Protein Homology CDS 62876 63547 . - 0 ID=cds-WP_016503126.1;Parent=gene-D5F92_RS06465;Dbxref=GenBank:WP_016503126.1;Name=WP_016503126.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850143.1;locus_tag=D5F92_RS06465;product=potassium channel family protein;protein_id=WP_016503126.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 63560 64939 . - . ID=gene-D5F92_RS06470;Name=D5F92_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06470;old_locus_tag=D5F92_06485 NZ_QYTJ01000031.1 Protein Homology CDS 63560 64939 . - 0 ID=cds-WP_016503125.1;Parent=gene-D5F92_RS06470;Dbxref=GenBank:WP_016503125.1;Name=WP_016503125.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680110.1;locus_tag=D5F92_RS06470;product=TrkH family potassium uptake protein;protein_id=WP_016503125.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 64954 65667 . - . ID=gene-D5F92_RS06475;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=D5F92_RS06475;old_locus_tag=D5F92_06490 NZ_QYTJ01000031.1 Protein Homology CDS 64954 65667 . - 0 ID=cds-WP_000188792.1;Parent=gene-D5F92_RS06475;Dbxref=GenBank:WP_000188792.1;Name=WP_000188792.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481130.1;locus_tag=D5F92_RS06475;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000188792.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 65795 66349 . + . ID=gene-D5F92_RS06480;Name=D5F92_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06480;old_locus_tag=D5F92_06495 NZ_QYTJ01000031.1 Protein Homology CDS 65795 66349 . + 0 ID=cds-WP_000537055.1;Parent=gene-D5F92_RS06480;Dbxref=GenBank:WP_000537055.1;Name=WP_000537055.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537058.1;locus_tag=D5F92_RS06480;product=LemA family protein;protein_id=WP_000537055.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 66370 67260 . + . ID=gene-D5F92_RS06485;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=D5F92_RS06485;old_locus_tag=D5F92_06500 NZ_QYTJ01000031.1 Protein Homology CDS 66370 67260 . + 0 ID=cds-WP_000966816.1;Parent=gene-D5F92_RS06485;Dbxref=GenBank:WP_000966816.1;Name=WP_000966816.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966825.1;locus_tag=D5F92_RS06485;product=zinc metalloprotease HtpX;protein_id=WP_000966816.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 67365 67898 . + . ID=gene-D5F92_RS06490;Name=D5F92_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06490;old_locus_tag=D5F92_06505 NZ_QYTJ01000031.1 Protein Homology CDS 67365 67898 . + 0 ID=cds-WP_016503124.1;Parent=gene-D5F92_RS06490;Dbxref=GenBank:WP_016503124.1;Name=WP_016503124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927541.1;locus_tag=D5F92_RS06490;product=YceD family protein;protein_id=WP_016503124.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 68133 68822 . + . ID=gene-D5F92_RS06495;Name=D5F92_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06495;old_locus_tag=D5F92_06510 NZ_QYTJ01000031.1 Protein Homology CDS 68133 68822 . + 0 ID=cds-WP_000516681.1;Parent=gene-D5F92_RS06495;Dbxref=GenBank:WP_000516681.1;Name=WP_000516681.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516681.1;locus_tag=D5F92_RS06495;product=response regulator transcription factor;protein_id=WP_000516681.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 68812 70317 . + . ID=gene-D5F92_RS06500;Name=D5F92_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06500;old_locus_tag=D5F92_06515 NZ_QYTJ01000031.1 Protein Homology CDS 68812 70317 . + 0 ID=cds-WP_016503123.1;Parent=gene-D5F92_RS06500;Dbxref=GenBank:WP_016503123.1;Name=WP_016503123.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768333.1;locus_tag=D5F92_RS06500;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_016503123.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 70466 70945 . + . ID=gene-D5F92_RS06505;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=D5F92_RS06505;old_locus_tag=D5F92_06520 NZ_QYTJ01000031.1 Protein Homology CDS 70466 70945 . + 0 ID=cds-WP_001203682.1;Parent=gene-D5F92_RS06505;Dbxref=GenBank:WP_001203682.1;Name=WP_001203682.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203682.1;locus_tag=D5F92_RS06505;product=transcriptional regulator NrdR;protein_id=WP_001203682.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 70945 72120 . + . ID=gene-D5F92_RS06510;Name=D5F92_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06510;old_locus_tag=D5F92_06525 NZ_QYTJ01000031.1 Protein Homology CDS 70945 72120 . + 0 ID=cds-WP_016503122.1;Parent=gene-D5F92_RS06510;Dbxref=GenBank:WP_016503122.1;Name=WP_016503122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074514.1;locus_tag=D5F92_RS06510;product=DnaD domain protein;protein_id=WP_016503122.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 72117 73019 . + . ID=gene-D5F92_RS06515;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=D5F92_RS06515;old_locus_tag=D5F92_06530 NZ_QYTJ01000031.1 Protein Homology CDS 72117 73019 . + 0 ID=cds-WP_016503121.1;Parent=gene-D5F92_RS06515;Dbxref=GenBank:WP_016503121.1;Name=WP_016503121.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481126.1;locus_tag=D5F92_RS06515;product=primosomal protein DnaI;protein_id=WP_016503121.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 73067 74377 . + . ID=gene-D5F92_RS06520;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=D5F92_RS06520;old_locus_tag=D5F92_06535 NZ_QYTJ01000031.1 Protein Homology CDS 73067 74377 . + 0 ID=cds-WP_000244019.1;Parent=gene-D5F92_RS06520;Dbxref=GenBank:WP_000244019.1;Name=WP_000244019.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=D5F92_RS06520;product=ribosome biogenesis GTPase Der;protein_id=WP_000244019.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 74533 77631 . + . ID=gene-D5F92_RS06525;Name=D5F92_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06525;old_locus_tag=D5F92_06540 NZ_QYTJ01000031.1 Protein Homology CDS 74533 77631 . + 0 ID=cds-WP_124785493.1;Parent=gene-D5F92_RS06525;Dbxref=GenBank:WP_124785493.1;Name=WP_124785493.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089139.1;locus_tag=D5F92_RS06525;product=DEAD/DEAH box helicase;protein_id=WP_124785493.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 77796 78413 . + . ID=gene-D5F92_RS06535;Name=D5F92_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06535;old_locus_tag=D5F92_06550 NZ_QYTJ01000031.1 Protein Homology CDS 77796 78413 . + 0 ID=cds-WP_001079340.1;Parent=gene-D5F92_RS06535;Dbxref=GenBank:WP_001079340.1;Name=WP_001079340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058720.1;locus_tag=D5F92_RS06535;product=hypothetical protein;protein_id=WP_001079340.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 78423 79754 . + . ID=gene-D5F92_RS06540;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=D5F92_RS06540;old_locus_tag=D5F92_06555 NZ_QYTJ01000031.1 Protein Homology CDS 78423 79754 . + 0 ID=cds-WP_016503117.1;Parent=gene-D5F92_RS06540;Dbxref=GenBank:WP_016503117.1;Name=WP_016503117.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058719.1;locus_tag=D5F92_RS06540;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_016503117.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 79840 80343 . + . ID=gene-D5F92_RS06545;Name=D5F92_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06545;old_locus_tag=D5F92_06560 NZ_QYTJ01000031.1 Protein Homology CDS 79840 80343 . + 0 ID=cds-WP_016503116.1;Parent=gene-D5F92_RS06545;Dbxref=GenBank:WP_016503116.1;Name=WP_016503116.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586872.1;locus_tag=D5F92_RS06545;product=GNAT family N-acetyltransferase;protein_id=WP_016503116.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 80430 82232 . + . ID=gene-D5F92_RS06550;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=D5F92_RS06550;old_locus_tag=D5F92_06565 NZ_QYTJ01000031.1 Protein Homology CDS 80430 82232 . + 0 ID=cds-WP_086163462.1;Parent=gene-D5F92_RS06550;Dbxref=GenBank:WP_086163462.1;Name=WP_086163462.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481122.1;locus_tag=D5F92_RS06550;product=endolytic transglycosylase MltG;protein_id=WP_086163462.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 82305 82787 . + . ID=gene-D5F92_RS06555;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=D5F92_RS06555;old_locus_tag=D5F92_06570 NZ_QYTJ01000031.1 Protein Homology CDS 82305 82787 . + 0 ID=cds-WP_000818772.1;Parent=gene-D5F92_RS06555;Dbxref=GenBank:WP_000818772.1;Name=WP_000818772.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481121.1;locus_tag=D5F92_RS06555;product=transcription elongation factor GreA;protein_id=WP_000818772.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 82891 84351 . + . ID=gene-D5F92_RS06560;Name=D5F92_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06560;old_locus_tag=D5F92_06575 NZ_QYTJ01000031.1 Protein Homology CDS 82891 84351 . + 0 ID=cds-WP_016503113.1;Parent=gene-D5F92_RS06560;Dbxref=GenBank:WP_016503113.1;Name=WP_016503113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058718.1;locus_tag=D5F92_RS06560;product=amidase;protein_id=WP_016503113.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 84512 85369 . + . ID=gene-D5F92_RS06565;Name=D5F92_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06565;old_locus_tag=D5F92_06580 NZ_QYTJ01000031.1 Protein Homology CDS 84512 85369 . + 0 ID=cds-WP_016503112.1;Parent=gene-D5F92_RS06565;Dbxref=GenBank:WP_016503112.1;Name=WP_016503112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751024.1;locus_tag=D5F92_RS06565;product=transporter substrate-binding domain-containing protein;protein_id=WP_016503112.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 85393 86058 . + . ID=gene-D5F92_RS06570;Name=D5F92_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06570;old_locus_tag=D5F92_06585 NZ_QYTJ01000031.1 Protein Homology CDS 85393 86058 . + 0 ID=cds-WP_000611501.1;Parent=gene-D5F92_RS06570;Dbxref=GenBank:WP_000611501.1;Name=WP_000611501.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611496.1;locus_tag=D5F92_RS06570;product=amino acid ABC transporter permease;protein_id=WP_000611501.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 86267 87199 . - . ID=gene-D5F92_RS06575;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D5F92_RS06575;old_locus_tag=D5F92_06590 NZ_QYTJ01000031.1 Protein Homology CDS 86267 87199 . - 0 ID=cds-WP_016503111.1;Parent=gene-D5F92_RS06575;Dbxref=GenBank:WP_016503111.1;Name=WP_016503111.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503111.1;locus_tag=D5F92_RS06575;product=membrane protein insertase YidC;protein_id=WP_016503111.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 87284 87562 . - . ID=gene-D5F92_RS06580;Name=D5F92_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06580;old_locus_tag=D5F92_06595 NZ_QYTJ01000031.1 Protein Homology CDS 87284 87562 . - 0 ID=cds-WP_000755489.1;Parent=gene-D5F92_RS06580;Dbxref=GenBank:WP_000755489.1;Name=WP_000755489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755490.1;locus_tag=D5F92_RS06580;product=acylphosphatase;protein_id=WP_000755489.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 87594 88337 . + . ID=gene-D5F92_RS06585;Name=D5F92_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06585;old_locus_tag=D5F92_06600 NZ_QYTJ01000031.1 Protein Homology CDS 87594 88337 . + 0 ID=cds-WP_000207505.1;Parent=gene-D5F92_RS06585;Dbxref=GenBank:WP_000207505.1;Name=WP_000207505.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207503.1;locus_tag=D5F92_RS06585;product=TrmH family RNA methyltransferase;protein_id=WP_000207505.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 88375 88878 . + . ID=gene-D5F92_RS06590;Name=D5F92_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06590;old_locus_tag=D5F92_06605 NZ_QYTJ01000031.1 Protein Homology CDS 88375 88878 . + 0 ID=cds-WP_000760496.1;Parent=gene-D5F92_RS06590;Dbxref=GenBank:WP_000760496.1;Name=WP_000760496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003087049.1;locus_tag=D5F92_RS06590;product=HD domain-containing protein;protein_id=WP_000760496.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 88901 89590 . + . ID=gene-D5F92_RS06595;Name=D5F92_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06595;old_locus_tag=D5F92_06610 NZ_QYTJ01000031.1 Protein Homology CDS 88901 89590 . + 0 ID=cds-WP_000999457.1;Parent=gene-D5F92_RS06595;Dbxref=GenBank:WP_000999457.1;Name=WP_000999457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632195.1;locus_tag=D5F92_RS06595;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000999457.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 89658 90179 . + . ID=gene-D5F92_RS06600;Name=D5F92_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06600;old_locus_tag=D5F92_06615 NZ_QYTJ01000031.1 Protein Homology CDS 89658 90179 . + 0 ID=cds-WP_000647216.1;Parent=gene-D5F92_RS06600;Dbxref=GenBank:WP_000647216.1;Name=WP_000647216.1;Ontology_term=GO:0036094;gbkey=CDS;go_function=small molecule binding|0036094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767843.1;locus_tag=D5F92_RS06600;product=transcription repressor NadR;protein_id=WP_000647216.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 90241 90783 . + . ID=gene-D5F92_RS06605;Name=D5F92_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06605;old_locus_tag=D5F92_06620 NZ_QYTJ01000031.1 Protein Homology CDS 90241 90783 . + 0 ID=cds-WP_000039538.1;Parent=gene-D5F92_RS06605;Dbxref=GenBank:WP_000039538.1;Name=WP_000039538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039538.1;locus_tag=D5F92_RS06605;product=hypothetical protein;protein_id=WP_000039538.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 90941 91180 . + . ID=gene-D5F92_RS06610;Name=D5F92_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06610;old_locus_tag=D5F92_06625 NZ_QYTJ01000031.1 Protein Homology CDS 90941 91180 . + 0 ID=cds-WP_000108275.1;Parent=gene-D5F92_RS06610;Dbxref=GenBank:WP_000108275.1;Name=WP_000108275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108276.1;locus_tag=D5F92_RS06610;product=YneF family protein;protein_id=WP_000108275.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 91355 92149 . + . ID=gene-D5F92_RS06615;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=D5F92_RS06615;old_locus_tag=D5F92_06630 NZ_QYTJ01000031.1 Protein Homology CDS 91355 92149 . + 0 ID=cds-WP_000378351.1;Parent=gene-D5F92_RS06615;Dbxref=GenBank:WP_000378351.1;Name=WP_000378351.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000378350.1;locus_tag=D5F92_RS06615;product=glutamate racemase;protein_id=WP_000378351.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 92146 93120 . + . ID=gene-D5F92_RS06620;Name=D5F92_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06620;old_locus_tag=D5F92_06635 NZ_QYTJ01000031.1 Protein Homology CDS 92146 93120 . + 0 ID=cds-WP_000167813.1;Parent=gene-D5F92_RS06620;Dbxref=GenBank:WP_000167813.1;Name=WP_000167813.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768312.1;locus_tag=D5F92_RS06620;product=nucleoside-triphosphate diphosphatase;protein_id=WP_000167813.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 93102 93623 . + . ID=gene-D5F92_RS06625;Name=D5F92_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06625;old_locus_tag=D5F92_06640 NZ_QYTJ01000031.1 Protein Homology CDS 93102 93623 . + 0 ID=cds-WP_001007723.1;Parent=gene-D5F92_RS06625;Dbxref=GenBank:WP_001007723.1;Name=WP_001007723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007721.1;locus_tag=D5F92_RS06625;product=metallophosphoesterase;protein_id=WP_001007723.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 93620 94093 . + . ID=gene-D5F92_RS06630;Name=cbpB;gbkey=Gene;gene=cbpB;gene_biotype=protein_coding;locus_tag=D5F92_RS06630;old_locus_tag=D5F92_06645 NZ_QYTJ01000031.1 Protein Homology CDS 93620 94093 . + 0 ID=cds-WP_000560708.1;Parent=gene-D5F92_RS06630;Dbxref=GenBank:WP_000560708.1;Name=WP_000560708.1;Ontology_term=GO:0180001;gbkey=CDS;gene=cbpB;go_function=cyclic-di-AMP binding|0180001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560707.1;locus_tag=D5F92_RS06630;product=cyclic-di-AMP-binding protein CbpB;protein_id=WP_000560708.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 94083 94823 . + . ID=gene-D5F92_RS06635;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=D5F92_RS06635;old_locus_tag=D5F92_06650 NZ_QYTJ01000031.1 Protein Homology CDS 94083 94823 . + 0 ID=cds-WP_000606413.1;Parent=gene-D5F92_RS06635;Dbxref=GenBank:WP_000606413.1;Name=WP_000606413.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770859.1;locus_tag=D5F92_RS06635;product=site-specific tyrosine recombinase XerD;protein_id=WP_000606413.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 94823 95530 . + . ID=gene-D5F92_RS06640;Name=D5F92_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06640;old_locus_tag=D5F92_06655 NZ_QYTJ01000031.1 Protein Homology CDS 94823 95530 . + 0 ID=cds-WP_016503109.1;Parent=gene-D5F92_RS06640;Dbxref=GenBank:WP_016503109.1;Name=WP_016503109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643695.1;locus_tag=D5F92_RS06640;product=segregation/condensation protein A;protein_id=WP_016503109.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 95527 96111 . + . ID=gene-D5F92_RS06645;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=D5F92_RS06645;old_locus_tag=D5F92_06660 NZ_QYTJ01000031.1 Protein Homology CDS 95527 96111 . + 0 ID=cds-WP_000221690.1;Parent=gene-D5F92_RS06645;Dbxref=GenBank:WP_000221690.1;Name=WP_000221690.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771433.1;locus_tag=D5F92_RS06645;product=SMC-Scp complex subunit ScpB;protein_id=WP_000221690.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 96101 96823 . + . ID=gene-D5F92_RS06650;Name=D5F92_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06650;old_locus_tag=D5F92_06665 NZ_QYTJ01000031.1 Protein Homology CDS 96101 96823 . + 0 ID=cds-WP_016481111.1;Parent=gene-D5F92_RS06650;Dbxref=GenBank:WP_016481111.1;Name=WP_016481111.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934129.1;locus_tag=D5F92_RS06650;product=pseudouridine synthase;protein_id=WP_016481111.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 96823 97074 . + . ID=gene-D5F92_RS06655;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D5F92_RS06655;old_locus_tag=D5F92_06670 NZ_QYTJ01000031.1 Protein Homology CDS 96823 97074 . + 0 ID=cds-WP_000920196.1;Parent=gene-D5F92_RS06655;Dbxref=GenBank:WP_000920196.1;Name=WP_000920196.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920199.1;locus_tag=D5F92_RS06655;product=membrane protein insertion efficiency factor YidD;protein_id=WP_000920196.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 97098 98537 . - . ID=gene-D5F92_RS06660;Name=D5F92_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06660;old_locus_tag=D5F92_06675 NZ_QYTJ01000031.1 Protein Homology CDS 97098 98537 . - 0 ID=cds-WP_001043412.1;Parent=gene-D5F92_RS06660;Dbxref=GenBank:WP_001043412.1;Name=WP_001043412.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043405.1;locus_tag=D5F92_RS06660;product=TrkH family potassium uptake protein;protein_id=WP_001043412.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 98542 99891 . - . ID=gene-D5F92_RS06665;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=D5F92_RS06665;old_locus_tag=D5F92_06680 NZ_QYTJ01000031.1 Protein Homology CDS 98542 99891 . - 0 ID=cds-WP_016503107.1;Parent=gene-D5F92_RS06665;Dbxref=GenBank:WP_016503107.1;Name=WP_016503107.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262566.1;locus_tag=D5F92_RS06665;product=Trk system potassium transporter TrkA;protein_id=WP_016503107.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 100097 101449 . + . ID=gene-D5F92_RS06670;Name=D5F92_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06670;old_locus_tag=D5F92_06685 NZ_QYTJ01000031.1 Protein Homology CDS 100097 101449 . + 0 ID=cds-WP_016503106.1;Parent=gene-D5F92_RS06670;Dbxref=GenBank:WP_016503106.1;Name=WP_016503106.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650770.1;locus_tag=D5F92_RS06670;product=APC family permease;protein_id=WP_016503106.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 101622 102170 . + . ID=gene-D5F92_RS06675;Name=D5F92_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06675;old_locus_tag=D5F92_06690 NZ_QYTJ01000031.1 Protein Homology CDS 101622 102170 . + 0 ID=cds-WP_001019793.1;Parent=gene-D5F92_RS06675;Dbxref=GenBank:WP_001019793.1;Name=WP_001019793.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001019793.1;locus_tag=D5F92_RS06675;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_001019793.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 102306 103475 . + . ID=gene-D5F92_RS06680;Name=D5F92_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06680;old_locus_tag=D5F92_06695 NZ_QYTJ01000031.1 Protein Homology CDS 102306 103475 . + 0 ID=cds-WP_016503105.1;Parent=gene-D5F92_RS06680;Dbxref=GenBank:WP_016503105.1;Name=WP_016503105.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285069.1;locus_tag=D5F92_RS06680;product=MalY/PatB family protein;protein_id=WP_016503105.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 103585 104214 . + . ID=gene-D5F92_RS06685;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=D5F92_RS06685;old_locus_tag=D5F92_06700 NZ_QYTJ01000031.1 Protein Homology CDS 103585 104214 . + 0 ID=cds-WP_000514490.1;Parent=gene-D5F92_RS06685;Dbxref=GenBank:WP_000514490.1;Name=WP_000514490.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=D5F92_RS06685;product=uracil phosphoribosyltransferase;protein_id=WP_000514490.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 104339 104929 . + . ID=gene-D5F92_RS06690;Name=D5F92_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06690;old_locus_tag=D5F92_06705 NZ_QYTJ01000031.1 Protein Homology CDS 104339 104929 . + 0 ID=cds-WP_000613483.1;Parent=gene-D5F92_RS06690;Dbxref=GenBank:WP_000613483.1;Name=WP_000613483.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262672.1;locus_tag=D5F92_RS06690;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_000613483.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 105029 105274 . + . ID=gene-D5F92_RS06695;Name=D5F92_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06695;old_locus_tag=D5F92_06710 NZ_QYTJ01000031.1 Protein Homology CDS 105029 105274 . + 0 ID=cds-WP_001041186.1;Parent=gene-D5F92_RS06695;Dbxref=GenBank:WP_001041186.1;Name=WP_001041186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041185.1;locus_tag=D5F92_RS06695;product=DUF2129 domain-containing protein;protein_id=WP_001041186.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 105429 106595 . + . ID=gene-D5F92_RS06700;Name=D5F92_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06700;old_locus_tag=D5F92_06715 NZ_QYTJ01000031.1 Protein Homology CDS 105429 106595 . + 0 ID=cds-WP_016503104.1;Parent=gene-D5F92_RS06700;Dbxref=GenBank:WP_016503104.1;Name=WP_016503104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771624.1;locus_tag=D5F92_RS06700;product=ABC transporter substrate-binding protein;protein_id=WP_016503104.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 106702 107571 . + . ID=gene-D5F92_RS06705;Name=D5F92_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06705;old_locus_tag=D5F92_06720 NZ_QYTJ01000031.1 Protein Homology CDS 106702 107571 . + 0 ID=cds-WP_000941400.1;Parent=gene-D5F92_RS06705;Dbxref=GenBank:WP_000941400.1;Name=WP_000941400.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941401.1;locus_tag=D5F92_RS06705;product=branched-chain amino acid ABC transporter permease;protein_id=WP_000941400.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 107574 108527 . + . ID=gene-D5F92_RS06710;Name=D5F92_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06710;old_locus_tag=D5F92_06725 NZ_QYTJ01000031.1 Protein Homology CDS 107574 108527 . + 0 ID=cds-WP_016503103.1;Parent=gene-D5F92_RS06710;Dbxref=GenBank:WP_016503103.1;Name=WP_016503103.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662325.1;locus_tag=D5F92_RS06710;product=branched-chain amino acid ABC transporter permease;protein_id=WP_016503103.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 108528 109292 . + . ID=gene-D5F92_RS06715;Name=D5F92_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06715;old_locus_tag=D5F92_06730 NZ_QYTJ01000031.1 Protein Homology CDS 108528 109292 . + 0 ID=cds-WP_001185985.1;Parent=gene-D5F92_RS06715;Dbxref=GenBank:WP_001185985.1;Name=WP_001185985.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650814.1;locus_tag=D5F92_RS06715;product=ABC transporter ATP-binding protein;protein_id=WP_001185985.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 109292 110002 . + . ID=gene-D5F92_RS06720;Name=D5F92_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06720;old_locus_tag=D5F92_06735 NZ_QYTJ01000031.1 Protein Homology CDS 109292 110002 . + 0 ID=cds-WP_086163456.1;Parent=gene-D5F92_RS06720;Dbxref=GenBank:WP_086163456.1;Name=WP_086163456.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178141.1;locus_tag=D5F92_RS06720;product=ABC transporter ATP-binding protein;protein_id=WP_086163456.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 110021 110680 . + . ID=gene-D5F92_RS06725;Name=D5F92_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06725;old_locus_tag=D5F92_06740 NZ_QYTJ01000031.1 Protein Homology CDS 110021 110680 . + 0 ID=cds-WP_001144245.1;Parent=gene-D5F92_RS06725;Dbxref=GenBank:WP_001144245.1;Name=WP_001144245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934124.1;locus_tag=D5F92_RS06725;product=CBS domain-containing protein;protein_id=WP_001144245.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 110771 111406 . + . ID=gene-D5F92_RS06730;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=D5F92_RS06730;old_locus_tag=D5F92_06745 NZ_QYTJ01000031.1 Protein Homology CDS 110771 111406 . + 0 ID=cds-WP_016503100.1;Parent=gene-D5F92_RS06730;Dbxref=GenBank:WP_016503100.1;Name=WP_016503100.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715594.1;locus_tag=D5F92_RS06730;product=dTMP kinase;protein_id=WP_016503100.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 111426 112289 . + . ID=gene-D5F92_RS06735;Name=D5F92_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06735;old_locus_tag=D5F92_06750 NZ_QYTJ01000031.1 Protein Homology CDS 111426 112289 . + 0 ID=cds-WP_000364568.1;Parent=gene-D5F92_RS06735;Dbxref=GenBank:WP_000364568.1;Name=WP_000364568.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364566.1;locus_tag=D5F92_RS06735;product=DNA polymerase III subunit delta';protein_id=WP_000364568.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 112320 112646 . + . ID=gene-D5F92_RS06740;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=D5F92_RS06740;old_locus_tag=D5F92_06755 NZ_QYTJ01000031.1 Protein Homology CDS 112320 112646 . + 0 ID=cds-WP_000358198.1;Parent=gene-D5F92_RS06740;Dbxref=GenBank:WP_000358198.1;Name=WP_000358198.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358198.1;locus_tag=D5F92_RS06740;product=DNA replication initiation control protein YabA;protein_id=WP_000358198.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 112646 113515 . + . ID=gene-D5F92_RS06745;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=D5F92_RS06745;old_locus_tag=D5F92_06760 NZ_QYTJ01000031.1 Protein Homology CDS 112646 113515 . + 0 ID=cds-WP_185690645.1;Parent=gene-D5F92_RS06745;Dbxref=GenBank:WP_185690645.1;Name=WP_185690645.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425856.1;locus_tag=D5F92_RS06745;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_185690645.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 113785 114420 . - . ID=gene-D5F92_RS06760;Name=D5F92_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06760;old_locus_tag=D5F92_06775 NZ_QYTJ01000031.1 Protein Homology CDS 113785 114420 . - 0 ID=cds-WP_086163454.1;Parent=gene-D5F92_RS06760;Dbxref=GenBank:WP_086163454.1;Name=WP_086163454.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285342.1;locus_tag=D5F92_RS06760;product=copper homeostasis protein CutC;protein_id=WP_086163454.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 114553 115644 . + . ID=gene-D5F92_RS06765;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=D5F92_RS06765;old_locus_tag=D5F92_06780 NZ_QYTJ01000031.1 Protein Homology CDS 114553 115644 . + 0 ID=cds-WP_000158395.1;Parent=gene-D5F92_RS06765;Dbxref=GenBank:WP_000158395.1;Name=WP_000158395.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285343.1;locus_tag=D5F92_RS06765;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000158395.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 115712 116260 . + . ID=gene-D5F92_RS06770;Name=D5F92_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06770;old_locus_tag=D5F92_06785 NZ_QYTJ01000031.1 Protein Homology CDS 115712 116260 . + 0 ID=cds-WP_001167085.1;Parent=gene-D5F92_RS06770;Dbxref=GenBank:WP_001167085.1;Name=WP_001167085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167084.1;locus_tag=D5F92_RS06770;product=acetyltransferase;protein_id=WP_001167085.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 116322 117503 . + . ID=gene-D5F92_RS06775;Name=D5F92_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06775;old_locus_tag=D5F92_06790 NZ_QYTJ01000031.1 Protein Homology CDS 116322 117503 . + 0 ID=cds-WP_000232153.1;Parent=gene-D5F92_RS06775;Dbxref=GenBank:WP_000232153.1;Name=WP_000232153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232149.1;locus_tag=D5F92_RS06775;product=phosphoglycerate dehydrogenase;protein_id=WP_000232153.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 117559 118035 . + . ID=gene-D5F92_RS06780;Name=D5F92_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06780;old_locus_tag=D5F92_06795 NZ_QYTJ01000031.1 Protein Homology CDS 117559 118035 . + 0 ID=cds-WP_000966772.1;Parent=gene-D5F92_RS06780;Dbxref=GenBank:WP_000966772.1;Name=WP_000966772.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285345.1;locus_tag=D5F92_RS06780;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000966772.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 118037 118393 . + . ID=gene-D5F92_RS06785;Name=D5F92_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06785;old_locus_tag=D5F92_06800 NZ_QYTJ01000031.1 Protein Homology CDS 118037 118393 . + 0 ID=cds-WP_016503093.1;Parent=gene-D5F92_RS06785;Dbxref=GenBank:WP_016503093.1;Name=WP_016503093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287944.1;locus_tag=D5F92_RS06785;product=arsenate reductase family protein;protein_id=WP_016503093.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 118433 119260 . - . ID=gene-D5F92_RS06790;Name=D5F92_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06790;old_locus_tag=D5F92_06805 NZ_QYTJ01000031.1 Protein Homology CDS 118433 119260 . - 0 ID=cds-WP_016503092.1;Parent=gene-D5F92_RS06790;Dbxref=GenBank:WP_016503092.1;Name=WP_016503092.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503092.1;locus_tag=D5F92_RS06790;product=exodeoxyribonuclease III;protein_id=WP_016503092.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 119337 120179 . - . ID=gene-D5F92_RS06795;Name=D5F92_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06795;old_locus_tag=D5F92_06810 NZ_QYTJ01000031.1 Protein Homology CDS 119337 120179 . - 0 ID=cds-WP_124749451.1;Parent=gene-D5F92_RS06795;Dbxref=GenBank:WP_124749451.1;Name=WP_124749451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735438.1;locus_tag=D5F92_RS06795;product=alpha/beta hydrolase;protein_id=WP_124749451.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 120163 121380 . - . ID=gene-D5F92_RS06800;Name=D5F92_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06800;old_locus_tag=D5F92_06815 NZ_QYTJ01000031.1 Protein Homology CDS 120163 121380 . - 0 ID=cds-WP_000556340.1;Parent=gene-D5F92_RS06800;Dbxref=GenBank:WP_000556340.1;Name=WP_000556340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632181.1;locus_tag=D5F92_RS06800;product=PTS sugar transporter subunit IIC;protein_id=WP_000556340.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 121716 122411 . + . ID=gene-D5F92_RS06810;Name=D5F92_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06810;old_locus_tag=D5F92_06825 NZ_QYTJ01000031.1 Protein Homology CDS 121716 122411 . + 0 ID=cds-WP_000039372.1;Parent=gene-D5F92_RS06810;Dbxref=GenBank:WP_000039372.1;Name=WP_000039372.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039367.1;locus_tag=D5F92_RS06810;product=YoaK family protein;protein_id=WP_000039372.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 122569 123444 . - . ID=gene-D5F92_RS06815;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=D5F92_RS06815;old_locus_tag=D5F92_06830 NZ_QYTJ01000031.1 Protein Homology CDS 122569 123444 . - 0 ID=cds-WP_016503091.1;Parent=gene-D5F92_RS06815;Dbxref=GenBank:WP_016503091.1;Name=WP_016503091.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248370.1;locus_tag=D5F92_RS06815;product=SAM-dependent methyltransferase TehB;protein_id=WP_016503091.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 123587 125584 . + . ID=gene-D5F92_RS06820;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=D5F92_RS06820;old_locus_tag=D5F92_06835 NZ_QYTJ01000031.1 Protein Homology CDS 123587 125584 . + 0 ID=cds-WP_016503090.1;Parent=gene-D5F92_RS06820;Dbxref=GenBank:WP_016503090.1;Name=WP_016503090.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058704.1;locus_tag=D5F92_RS06820;product=methionine--tRNA ligase;protein_id=WP_016503090.1;transl_table=11 NZ_QYTJ01000031.1 RefSeq gene 125779 127116 . + . ID=gene-D5F92_RS06825;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D5F92_RS06825;old_locus_tag=D5F92_06840 NZ_QYTJ01000031.1 Protein Homology CDS 125779 127116 . + 0 ID=cds-WP_016503089.1;Parent=gene-D5F92_RS06825;Dbxref=GenBank:WP_016503089.1;Name=WP_016503089.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239241.1;locus_tag=D5F92_RS06825;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_016503089.1;transl_table=11 ##sequence-region NZ_QYTJ01000032.1 1 3202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000032.1 RefSeq region 1 3202 . + . ID=NZ_QYTJ01000032.1:1..3202;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000032.1 RefSeq gene 253 3202 . + . ID=gene-D5F92_RS06830;Name=D5F92_RS06830;end_range=3202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06830;old_locus_tag=D5F92_06845;partial=true NZ_QYTJ01000032.1 Protein Homology CDS 253 3202 . + 0 ID=cds-WP_124785496.1;Parent=gene-D5F92_RS06830;Dbxref=GenBank:WP_124785496.1;Name=WP_124785496.1;end_range=3202,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648441.1;locus_tag=D5F92_RS06830;partial=true;product=accessory Sec-dependent serine-rich glycoprotein adhesin;protein_id=WP_124785496.1;transl_table=11 ##sequence-region NZ_QYTJ01000033.1 1 38065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000033.1 RefSeq region 1 38065 . + . ID=NZ_QYTJ01000033.1:1..38065;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000033.1 RefSeq pseudogene 1 611 . - . ID=gene-D5F92_RS06835;Name=D5F92_RS06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS06835;old_locus_tag=D5F92_06850;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000033.1 Protein Homology CDS 1 611 . - 0 ID=cds-D5F92_RS06835;Parent=gene-D5F92_RS06835;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS06835;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000033.1 RefSeq pseudogene 681 2300 . + . ID=gene-D5F92_RS06840;Name=hylB;gbkey=Gene;gene=hylB;gene_biotype=pseudogene;locus_tag=D5F92_RS06840;old_locus_tag=D5F92_06855;partial=true;pseudo=true;start_range=.,681 NZ_QYTJ01000033.1 Protein Homology CDS 681 2300 . + 0 ID=cds-D5F92_RS06840;Parent=gene-D5F92_RS06840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=hylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_192884539.1;locus_tag=D5F92_RS06840;partial=true;product=hyaluronate lyase;pseudo=true;start_range=.,681;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 2352 3398 . - . ID=gene-D5F92_RS06845;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=D5F92_RS06845;old_locus_tag=D5F92_06860 NZ_QYTJ01000033.1 Protein Homology CDS 2352 3398 . - 0 ID=cds-WP_016502954.1;Parent=gene-D5F92_RS06845;Dbxref=GenBank:WP_016502954.1;Name=WP_016502954.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134275.1;locus_tag=D5F92_RS06845;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_016502954.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 3605 4198 . - . ID=gene-D5F92_RS06850;Name=D5F92_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06850;old_locus_tag=D5F92_06865 NZ_QYTJ01000033.1 Protein Homology CDS 3605 4198 . - 0 ID=cds-WP_000139156.1;Parent=gene-D5F92_RS06850;Dbxref=GenBank:WP_000139156.1;Name=WP_000139156.1;Ontology_term=GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018379055.1;locus_tag=D5F92_RS06850;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=WP_000139156.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 4198 5067 . - . ID=gene-D5F92_RS06855;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=D5F92_RS06855;old_locus_tag=D5F92_06870 NZ_QYTJ01000033.1 Protein Homology CDS 4198 5067 . - 0 ID=cds-WP_000676112.1;Parent=gene-D5F92_RS06855;Dbxref=GenBank:WP_000676112.1;Name=WP_000676112.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276675.1;locus_tag=D5F92_RS06855;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676112.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 5126 6229 . - . ID=gene-D5F92_RS06860;Name=D5F92_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06860;old_locus_tag=D5F92_06875 NZ_QYTJ01000033.1 Protein Homology CDS 5126 6229 . - 0 ID=cds-WP_000716833.1;Parent=gene-D5F92_RS06860;Dbxref=GenBank:WP_000716833.1;Name=WP_000716833.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058604.1;locus_tag=D5F92_RS06860;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000716833.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 6238 7026 . - . ID=gene-D5F92_RS06865;Name=D5F92_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06865;old_locus_tag=D5F92_06880 NZ_QYTJ01000033.1 Protein Homology CDS 6238 7026 . - 0 ID=cds-WP_000647415.1;Parent=gene-D5F92_RS06865;Dbxref=GenBank:WP_000647415.1;Name=WP_000647415.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058605.1;locus_tag=D5F92_RS06865;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_000647415.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 7016 7699 . - . ID=gene-D5F92_RS06870;Name=D5F92_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06870;old_locus_tag=D5F92_06885 NZ_QYTJ01000033.1 Protein Homology CDS 7016 7699 . - 0 ID=cds-WP_000365677.1;Parent=gene-D5F92_RS06870;Dbxref=GenBank:WP_000365677.1;Name=WP_000365677.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365681.1;locus_tag=D5F92_RS06870;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_000365677.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 7803 8483 . - . ID=gene-D5F92_RS06875;Name=D5F92_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06875;old_locus_tag=D5F92_06890 NZ_QYTJ01000033.1 Protein Homology CDS 7803 8483 . - 0 ID=cds-WP_000221657.1;Parent=gene-D5F92_RS06875;Dbxref=GenBank:WP_000221657.1;Name=WP_000221657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221657.1;locus_tag=D5F92_RS06875;product=DnaD domain-containing protein;protein_id=WP_000221657.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 8601 9119 . - . ID=gene-D5F92_RS06880;Name=D5F92_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06880;old_locus_tag=D5F92_06895 NZ_QYTJ01000033.1 Protein Homology CDS 8601 9119 . - 0 ID=cds-WP_000365343.1;Parent=gene-D5F92_RS06880;Dbxref=GenBank:WP_000365343.1;Name=WP_000365343.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294327.1;locus_tag=D5F92_RS06880;product=adenine phosphoribosyltransferase;protein_id=WP_000365343.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 9242 11806 . - . ID=gene-D5F92_RS06885;Name=D5F92_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06885;old_locus_tag=D5F92_06900 NZ_QYTJ01000033.1 Protein Homology CDS 9242 11806 . - 0 ID=cds-WP_016502955.1;Parent=gene-D5F92_RS06885;Dbxref=GenBank:WP_016502955.1;Name=WP_016502955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650575.1;locus_tag=D5F92_RS06885;product=GBS Bsp-like repeat-containing protein;protein_id=WP_016502955.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 11958 14156 . - . ID=gene-D5F92_RS06895;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=D5F92_RS06895;old_locus_tag=D5F92_06910 NZ_QYTJ01000033.1 Protein Homology CDS 11958 14156 . - 0 ID=cds-WP_000622234.1;Parent=gene-D5F92_RS06895;Dbxref=GenBank:WP_000622234.1;Name=WP_000622234.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622225.1;locus_tag=D5F92_RS06895;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000622234.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 14153 14914 . - . ID=gene-D5F92_RS06900;Name=D5F92_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06900;old_locus_tag=D5F92_06915 NZ_QYTJ01000033.1 Protein Homology CDS 14153 14914 . - 0 ID=cds-WP_000124580.1;Parent=gene-D5F92_RS06900;Dbxref=GenBank:WP_000124580.1;Name=WP_000124580.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771878.1;locus_tag=D5F92_RS06900;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000124580.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 14916 15845 . - . ID=gene-D5F92_RS06905;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=D5F92_RS06905;old_locus_tag=D5F92_06920 NZ_QYTJ01000033.1 Protein Homology CDS 14916 15845 . - 0 ID=cds-WP_000405388.1;Parent=gene-D5F92_RS06905;Dbxref=GenBank:WP_000405388.1;Name=WP_000405388.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405389.1;locus_tag=D5F92_RS06905;product=ribonuclease Z;protein_id=WP_000405388.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 15887 16534 . - . ID=gene-D5F92_RS06910;Name=D5F92_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06910;old_locus_tag=D5F92_06925 NZ_QYTJ01000033.1 Protein Homology CDS 15887 16534 . - 0 ID=cds-WP_016502956.1;Parent=gene-D5F92_RS06910;Dbxref=GenBank:WP_016502956.1;Name=WP_016502956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568323.1;locus_tag=D5F92_RS06910;product=cystathionine beta-lyase;protein_id=WP_016502956.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 16527 17765 . - . ID=gene-D5F92_RS06915;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=D5F92_RS06915;old_locus_tag=D5F92_06930 NZ_QYTJ01000033.1 Protein Homology CDS 16527 17765 . - 0 ID=cds-WP_000573351.1;Parent=gene-D5F92_RS06915;Dbxref=GenBank:WP_000573351.1;Name=WP_000573351.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573352.1;locus_tag=D5F92_RS06915;product=GTPase HflX;protein_id=WP_000573351.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 17856 18746 . - . ID=gene-D5F92_RS06920;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=D5F92_RS06920;old_locus_tag=D5F92_06935 NZ_QYTJ01000033.1 Protein Homology CDS 17856 18746 . - 0 ID=cds-WP_001226485.1;Parent=gene-D5F92_RS06920;Dbxref=GenBank:WP_001226485.1;Name=WP_001226485.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226479.1;locus_tag=D5F92_RS06920;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001226485.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 18857 19033 . + . ID=gene-D5F92_RS06925;Name=D5F92_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06925;old_locus_tag=D5F92_06940 NZ_QYTJ01000033.1 Protein Homology CDS 18857 19033 . + 0 ID=cds-WP_000239229.1;Parent=gene-D5F92_RS06925;Dbxref=GenBank:WP_000239229.1;Name=WP_000239229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239229.1;locus_tag=D5F92_RS06925;product=DUF3042 family protein;protein_id=WP_000239229.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 19075 19992 . - . ID=gene-D5F92_RS06930;Name=D5F92_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06930;old_locus_tag=D5F92_06945 NZ_QYTJ01000033.1 Protein Homology CDS 19075 19992 . - 0 ID=cds-WP_000800360.1;Parent=gene-D5F92_RS06930;Dbxref=GenBank:WP_000800360.1;Name=WP_000800360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800355.1;locus_tag=D5F92_RS06930;product=TDT family transporter;protein_id=WP_000800360.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 20127 23885 . - . ID=gene-D5F92_RS06935;Name=D5F92_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06935;old_locus_tag=D5F92_06950 NZ_QYTJ01000033.1 Protein Homology CDS 20127 23885 . - 0 ID=cds-WP_124749008.1;Parent=gene-D5F92_RS06935;Dbxref=GenBank:WP_124749008.1;Name=WP_124749008.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823026.1;locus_tag=D5F92_RS06935;product=pullulanase;protein_id=WP_124749008.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 24054 24788 . - . ID=gene-D5F92_RS06940;Name=D5F92_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06940;old_locus_tag=D5F92_06955 NZ_QYTJ01000033.1 Protein Homology CDS 24054 24788 . - 0 ID=cds-WP_001205488.1;Parent=gene-D5F92_RS06940;Dbxref=GenBank:WP_001205488.1;Name=WP_001205488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650202.1;locus_tag=D5F92_RS06940;product=PHP domain-containing protein;protein_id=WP_001205488.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 24803 25387 . - . ID=gene-D5F92_RS06945;Name=D5F92_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06945;old_locus_tag=D5F92_06960 NZ_QYTJ01000033.1 Protein Homology CDS 24803 25387 . - 0 ID=cds-WP_016480876.1;Parent=gene-D5F92_RS06945;Dbxref=GenBank:WP_016480876.1;Name=WP_016480876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130595.1;locus_tag=D5F92_RS06945;product=uracil-DNA glycosylase family protein;protein_id=WP_016480876.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 25484 26890 . - . ID=gene-D5F92_RS06950;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=D5F92_RS06950;old_locus_tag=D5F92_06965 NZ_QYTJ01000033.1 Protein Homology CDS 25484 26890 . - 0 ID=cds-WP_000150954.1;Parent=gene-D5F92_RS06950;Dbxref=GenBank:WP_000150954.1;Name=WP_000150954.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pepV;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645438.1;locus_tag=D5F92_RS06950;product=dipeptidase PepV;protein_id=WP_000150954.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 26937 27539 . - . ID=gene-D5F92_RS06955;Name=D5F92_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06955;old_locus_tag=D5F92_06970 NZ_QYTJ01000033.1 Protein Homology CDS 26937 27539 . - 0 ID=cds-WP_016480878.1;Parent=gene-D5F92_RS06955;Dbxref=GenBank:WP_016480878.1;Name=WP_016480878.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184478.1;locus_tag=D5F92_RS06955;product=nitroreductase family protein;protein_id=WP_016480878.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 27709 29490 . + . ID=gene-D5F92_RS06960;Name=D5F92_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06960;old_locus_tag=D5F92_06975 NZ_QYTJ01000033.1 Protein Homology CDS 27709 29490 . + 0 ID=cds-WP_016480879.1;Parent=gene-D5F92_RS06960;Dbxref=GenBank:WP_016480879.1;Name=WP_016480879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480879.1;locus_tag=D5F92_RS06960;product=glycerophosphodiester phosphodiesterase;protein_id=WP_016480879.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 29532 31313 . - . ID=gene-D5F92_RS06965;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=D5F92_RS06965;old_locus_tag=D5F92_06980 NZ_QYTJ01000033.1 Protein Homology CDS 29532 31313 . - 0 ID=cds-WP_016480880.1;Parent=gene-D5F92_RS06965;Dbxref=GenBank:WP_016480880.1;Name=WP_016480880.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649308.1;locus_tag=D5F92_RS06965;product=excinuclease ABC subunit UvrC;protein_id=WP_016480880.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 31472 32239 . + . ID=gene-D5F92_RS06970;Name=D5F92_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06970;old_locus_tag=D5F92_06985 NZ_QYTJ01000033.1 Protein Homology CDS 31472 32239 . + 0 ID=cds-WP_124749470.1;Parent=gene-D5F92_RS06970;Dbxref=GenBank:WP_124749470.1;Name=WP_124749470.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567582.1;locus_tag=D5F92_RS06970;product=epoxyqueuosine reductase QueH;protein_id=WP_124749470.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 32298 33638 . - . ID=gene-D5F92_RS06975;Name=D5F92_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06975;old_locus_tag=D5F92_06990 NZ_QYTJ01000033.1 Protein Homology CDS 32298 33638 . - 0 ID=cds-WP_016502960.1;Parent=gene-D5F92_RS06975;Dbxref=GenBank:WP_016502960.1;Name=WP_016502960.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285047.1;locus_tag=D5F92_RS06975;product=MATE family efflux transporter;protein_id=WP_016502960.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 33738 34154 . - . ID=gene-D5F92_RS06980;Name=D5F92_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06980;old_locus_tag=D5F92_06995 NZ_QYTJ01000033.1 Protein Homology CDS 33738 34154 . - 0 ID=cds-WP_161513764.1;Parent=gene-D5F92_RS06980;Dbxref=GenBank:WP_161513764.1;Name=WP_161513764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650340.1;locus_tag=D5F92_RS06980;product=VOC family protein;protein_id=WP_161513764.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 34158 34655 . - . ID=gene-D5F92_RS06985;Name=D5F92_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06985;old_locus_tag=D5F92_07000 NZ_QYTJ01000033.1 Protein Homology CDS 34158 34655 . - 0 ID=cds-WP_016502962.1;Parent=gene-D5F92_RS06985;Dbxref=GenBank:WP_016502962.1;Name=WP_016502962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502962.1;locus_tag=D5F92_RS06985;product=hypothetical protein;protein_id=WP_016502962.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 34885 35481 . + . ID=gene-D5F92_RS06990;Name=D5F92_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS06990;old_locus_tag=D5F92_07005 NZ_QYTJ01000033.1 Protein Homology CDS 34885 35481 . + 0 ID=cds-WP_016502963.1;Parent=gene-D5F92_RS06990;Dbxref=GenBank:WP_016502963.1;Name=WP_016502963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058613.1;locus_tag=D5F92_RS06990;product=Ltp family lipoprotein;protein_id=WP_016502963.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 35736 36269 . - . ID=gene-D5F92_RS11415;Name=D5F92_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11415;old_locus_tag=D5F92_07010 NZ_QYTJ01000033.1 Protein Homology CDS 35736 36269 . - 0 ID=cds-WP_016502964.1;Parent=gene-D5F92_RS11415;Dbxref=GenBank:WP_016502964.1;Name=WP_016502964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770971.1;locus_tag=D5F92_RS11415;product=hypothetical protein;protein_id=WP_016502964.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 36820 37068 . - . ID=gene-D5F92_RS07005;Name=D5F92_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07005;old_locus_tag=D5F92_07020 NZ_QYTJ01000033.1 Protein Homology CDS 36820 37068 . - 0 ID=cds-WP_260424804.1;Parent=gene-D5F92_RS07005;Dbxref=GenBank:WP_260424804.1;Name=WP_260424804.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=D5F92_RS07005;product=ATP-binding cassette domain-containing protein;protein_id=WP_260424804.1;transl_table=11 NZ_QYTJ01000033.1 RefSeq gene 37141 38004 . - . ID=gene-D5F92_RS07010;Name=D5F92_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07010;old_locus_tag=D5F92_07025 NZ_QYTJ01000033.1 Protein Homology CDS 37141 38004 . - 0 ID=cds-WP_124785498.1;Parent=gene-D5F92_RS07010;Dbxref=GenBank:WP_124785498.1;Name=WP_124785498.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS07010;product=IS982 family transposase;protein_id=WP_124785498.1;transl_table=11 ##sequence-region NZ_QYTJ01000034.1 1 116949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000034.1 RefSeq region 1 116949 . + . ID=NZ_QYTJ01000034.1:1..116949;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000034.1 RefSeq pseudogene 1 225 . + . ID=gene-D5F92_RS07015;Name=D5F92_RS07015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07015;old_locus_tag=D5F92_07030;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000034.1 Protein Homology CDS 1 225 . + 0 ID=cds-D5F92_RS07015;Parent=gene-D5F92_RS07015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037459.1;locus_tag=D5F92_RS07015;partial=true;product=surface protein;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 250 1074 . + . ID=gene-D5F92_RS07020;Name=D5F92_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07020;old_locus_tag=D5F92_07035 NZ_QYTJ01000034.1 Protein Homology CDS 250 1074 . + 0 ID=cds-WP_015058658.1;Parent=gene-D5F92_RS07020;Dbxref=GenBank:WP_015058658.1;Name=WP_015058658.1;Ontology_term=GO:0009103,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661828.1;locus_tag=D5F92_RS07020;product=LicD family protein;protein_id=WP_015058658.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 1074 1796 . + . ID=gene-D5F92_RS07025;Name=D5F92_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07025;old_locus_tag=D5F92_07040 NZ_QYTJ01000034.1 Protein Homology CDS 1074 1796 . + 0 ID=cds-WP_000981011.1;Parent=gene-D5F92_RS07025;Dbxref=GenBank:WP_000981011.1;Name=WP_000981011.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645952.1;locus_tag=D5F92_RS07025;product=IspD/TarI family cytidylyltransferase;protein_id=WP_000981011.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 1796 2854 . + . ID=gene-D5F92_RS07030;Name=D5F92_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07030;old_locus_tag=D5F92_07045 NZ_QYTJ01000034.1 Protein Homology CDS 1796 2854 . + 0 ID=cds-WP_086163413.1;Parent=gene-D5F92_RS07030;Dbxref=GenBank:WP_086163413.1;Name=WP_086163413.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648247.1;locus_tag=D5F92_RS07030;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_086163413.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 2856 3791 . + . ID=gene-D5F92_RS07035;Name=D5F92_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07035;old_locus_tag=D5F92_07050 NZ_QYTJ01000034.1 Protein Homology CDS 2856 3791 . + 0 ID=cds-WP_016481011.1;Parent=gene-D5F92_RS07035;Dbxref=GenBank:WP_016481011.1;Name=WP_016481011.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241097.1;locus_tag=D5F92_RS07035;product=glycosyltransferase family 2 protein;protein_id=WP_016481011.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 3800 4747 . + . ID=gene-D5F92_RS07040;Name=D5F92_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07040;old_locus_tag=D5F92_07055 NZ_QYTJ01000034.1 Protein Homology CDS 3800 4747 . + 0 ID=cds-WP_016503029.1;Parent=gene-D5F92_RS07040;Dbxref=GenBank:WP_016503029.1;Name=WP_016503029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241108.1;locus_tag=D5F92_RS07040;product=glycosyltransferase;protein_id=WP_016503029.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 4749 6113 . + . ID=gene-D5F92_RS07045;Name=D5F92_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07045;old_locus_tag=D5F92_07060 NZ_QYTJ01000034.1 Protein Homology CDS 4749 6113 . + 0 ID=cds-WP_001049710.1;Parent=gene-D5F92_RS07045;Dbxref=GenBank:WP_001049710.1;Name=WP_001049710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049705.1;locus_tag=D5F92_RS07045;product=DUF2142 domain-containing protein;protein_id=WP_001049710.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 6113 7537 . + . ID=gene-D5F92_RS07050;Name=D5F92_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07050;old_locus_tag=D5F92_07065 NZ_QYTJ01000034.1 Protein Homology CDS 6113 7537 . + 0 ID=cds-WP_000771256.1;Parent=gene-D5F92_RS07050;Dbxref=GenBank:WP_000771256.1;Name=WP_000771256.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768353.1;locus_tag=D5F92_RS07050;product=oligosaccharide flippase family protein;protein_id=WP_000771256.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 7534 8382 . + . ID=gene-D5F92_RS07055;Name=D5F92_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07055;old_locus_tag=D5F92_07070 NZ_QYTJ01000034.1 Protein Homology CDS 7534 8382 . + 0 ID=cds-WP_016481009.1;Parent=gene-D5F92_RS07055;Dbxref=GenBank:WP_016481009.1;Name=WP_016481009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875978.1;locus_tag=D5F92_RS07055;product=glycosyltransferase;protein_id=WP_016481009.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 8372 9520 . + . ID=gene-D5F92_RS07060;Name=D5F92_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07060;old_locus_tag=D5F92_07075 NZ_QYTJ01000034.1 Protein Homology CDS 8372 9520 . + 0 ID=cds-WP_016503028.1;Parent=gene-D5F92_RS07060;Dbxref=GenBank:WP_016503028.1;Name=WP_016503028.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428970.1;locus_tag=D5F92_RS07060;product=glycosyltransferase family 4 protein;protein_id=WP_016503028.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 9801 10073 . + . ID=gene-D5F92_RS07065;Name=D5F92_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07065;old_locus_tag=D5F92_07080 NZ_QYTJ01000034.1 Protein Homology CDS 9801 10073 . + 0 ID=cds-WP_000389767.1;Parent=gene-D5F92_RS07065;Dbxref=GenBank:WP_000389767.1;Name=WP_000389767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389766.1;locus_tag=D5F92_RS07065;product=hypothetical protein;protein_id=WP_000389767.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 10057 10626 . + . ID=gene-D5F92_RS07070;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F92_RS07070;old_locus_tag=D5F92_07085 NZ_QYTJ01000034.1 Protein Homology CDS 10057 10626 . + 0 ID=cds-WP_016503026.1;Parent=gene-D5F92_RS07070;Dbxref=GenBank:WP_016503026.1;Name=WP_016503026.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828634.1;locus_tag=D5F92_RS07070;product=signal peptidase I;protein_id=WP_016503026.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 10645 14946 . + . ID=gene-D5F92_RS07075;Name=D5F92_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07075;old_locus_tag=D5F92_07090 NZ_QYTJ01000034.1 Protein Homology CDS 10645 14946 . + 0 ID=cds-WP_124749531.1;Parent=gene-D5F92_RS07075;Dbxref=GenBank:WP_124749531.1;Name=WP_124749531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913274.1;locus_tag=D5F92_RS07075;product=InlB B-repeat-containing protein;protein_id=WP_124749531.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 14987 16504 . + . ID=gene-D5F92_RS07080;Name=D5F92_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07080;old_locus_tag=D5F92_07095 NZ_QYTJ01000034.1 Protein Homology CDS 14987 16504 . + 0 ID=cds-WP_124785500.1;Parent=gene-D5F92_RS07080;Dbxref=GenBank:WP_124785500.1;Name=WP_124785500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728388.1;locus_tag=D5F92_RS07080;product=SpaH/EbpB family LPXTG-anchored major pilin;protein_id=WP_124785500.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 16542 17417 . + . ID=gene-D5F92_RS07085;Name=D5F92_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07085;old_locus_tag=D5F92_07100 NZ_QYTJ01000034.1 Protein Homology CDS 16542 17417 . + 0 ID=cds-WP_016481003.1;Parent=gene-D5F92_RS07085;Dbxref=GenBank:WP_016481003.1;Name=WP_016481003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481003.1;locus_tag=D5F92_RS07085;product=class C sortase;protein_id=WP_016481003.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 17407 18078 . + . ID=gene-D5F92_RS07090;Name=D5F92_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07090;old_locus_tag=D5F92_07105 NZ_QYTJ01000034.1 Protein Homology CDS 17407 18078 . + 0 ID=cds-WP_000639476.1;Parent=gene-D5F92_RS07090;Dbxref=GenBank:WP_000639476.1;Name=WP_000639476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639475.1;locus_tag=D5F92_RS07090;product=hypothetical protein;protein_id=WP_000639476.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 18071 18670 . + . ID=gene-D5F92_RS07095;Name=D5F92_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07095;old_locus_tag=D5F92_07110 NZ_QYTJ01000034.1 Protein Homology CDS 18071 18670 . + 0 ID=cds-WP_016481002.1;Parent=gene-D5F92_RS07095;Dbxref=GenBank:WP_016481002.1;Name=WP_016481002.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621247.1;locus_tag=D5F92_RS07095;product=sortase;protein_id=WP_016481002.1;transl_table=11 NZ_QYTJ01000034.1 cmsearch riboswitch 18739 18884 . + . ID=id-NZ_QYTJ01000034.1:18739..18884;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000034.1 RefSeq gene 18954 19538 . + . ID=gene-D5F92_RS07100;Name=D5F92_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07100;old_locus_tag=D5F92_07115 NZ_QYTJ01000034.1 Protein Homology CDS 18954 19538 . + 0 ID=cds-WP_000185809.1;Parent=gene-D5F92_RS07100;Dbxref=GenBank:WP_000185809.1;Name=WP_000185809.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185809.1;locus_tag=D5F92_RS07100;product=ECF transporter S component;protein_id=WP_000185809.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 19519 20160 . + . ID=gene-D5F92_RS07105;Name=D5F92_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07105;old_locus_tag=D5F92_07120 NZ_QYTJ01000034.1 Protein Homology CDS 19519 20160 . + 0 ID=cds-WP_016481001.1;Parent=gene-D5F92_RS07105;Dbxref=GenBank:WP_016481001.1;Name=WP_016481001.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952717.1;locus_tag=D5F92_RS07105;product=phosphatase PAP2 family protein;protein_id=WP_016481001.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 20253 21188 . + . ID=gene-D5F92_RS07110;Name=D5F92_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07110;old_locus_tag=D5F92_07125 NZ_QYTJ01000034.1 Protein Homology CDS 20253 21188 . + 0 ID=cds-WP_000747789.1;Parent=gene-D5F92_RS07110;Dbxref=GenBank:WP_000747789.1;Name=WP_000747789.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747785.1;locus_tag=D5F92_RS07110;product=TIGR01212 family radical SAM protein;protein_id=WP_000747789.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 21181 21747 . + . ID=gene-D5F92_RS07115;Name=D5F92_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07115;old_locus_tag=D5F92_07130 NZ_QYTJ01000034.1 Protein Homology CDS 21181 21747 . + 0 ID=cds-WP_000596036.1;Parent=gene-D5F92_RS07115;Dbxref=GenBank:WP_000596036.1;Name=WP_000596036.1;Ontology_term=GO:0008033,GO:0032259,GO:0004808,GO:0008757,GO:1904047;gbkey=CDS;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000596040.1;locus_tag=D5F92_RS07115;product=tRNA (mnm(5)s(2)U34)-methyltransferase;protein_id=WP_000596036.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 21927 23261 . + . ID=gene-D5F92_RS07120;Name=D5F92_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07120;old_locus_tag=D5F92_07135 NZ_QYTJ01000034.1 Protein Homology CDS 21927 23261 . + 0 ID=cds-WP_000389986.1;Parent=gene-D5F92_RS07120;Dbxref=GenBank:WP_000389986.1;Name=WP_000389986.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389990.1;locus_tag=D5F92_RS07120;product=hemolysin family protein;protein_id=WP_000389986.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 23329 24117 . + . ID=gene-D5F92_RS07125;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=D5F92_RS07125;old_locus_tag=D5F92_07140 NZ_QYTJ01000034.1 Protein Homology CDS 23329 24117 . + 0 ID=cds-WP_000807697.1;Parent=gene-D5F92_RS07125;Dbxref=GenBank:WP_000807697.1;Name=WP_000807697.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645131.1;locus_tag=D5F92_RS07125;product=pyruvate formate-lyase-activating protein;protein_id=WP_000807697.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 24234 25169 . + . ID=gene-D5F92_RS07130;Name=D5F92_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07130;old_locus_tag=D5F92_07145 NZ_QYTJ01000034.1 Protein Homology CDS 24234 25169 . + 0 ID=cds-WP_016503021.1;Parent=gene-D5F92_RS07130;Dbxref=GenBank:WP_016503021.1;Name=WP_016503021.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=D5F92_RS07130;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_016503021.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 25229 25882 . + . ID=gene-D5F92_RS07135;Name=D5F92_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07135;old_locus_tag=D5F92_07150 NZ_QYTJ01000034.1 Protein Homology CDS 25229 25882 . + 0 ID=cds-WP_000604060.1;Parent=gene-D5F92_RS07135;Dbxref=GenBank:WP_000604060.1;Name=WP_000604060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480997.1;locus_tag=D5F92_RS07135;product=DUF1803 domain-containing protein;protein_id=WP_000604060.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 25912 26913 . - . ID=gene-D5F92_RS07140;Name=D5F92_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07140;old_locus_tag=D5F92_07155 NZ_QYTJ01000034.1 Protein Homology CDS 25912 26913 . - 0 ID=cds-WP_124785502.1;Parent=gene-D5F92_RS07140;Dbxref=GenBank:WP_124785502.1;Name=WP_124785502.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480996.1;locus_tag=D5F92_RS07140;product=FecCD family ABC transporter permease;protein_id=WP_124785502.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 26910 27935 . - . ID=gene-D5F92_RS07145;Name=D5F92_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07145;old_locus_tag=D5F92_07160 NZ_QYTJ01000034.1 Protein Homology CDS 26910 27935 . - 0 ID=cds-WP_016503020.1;Parent=gene-D5F92_RS07145;Dbxref=GenBank:WP_016503020.1;Name=WP_016503020.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000471515.1;locus_tag=D5F92_RS07145;product=FecCD family ABC transporter permease;protein_id=WP_016503020.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 27951 28883 . - . ID=gene-D5F92_RS07150;Name=D5F92_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07150;old_locus_tag=D5F92_07165 NZ_QYTJ01000034.1 Protein Homology CDS 27951 28883 . - 0 ID=cds-WP_000719463.1;Parent=gene-D5F92_RS07150;Dbxref=GenBank:WP_000719463.1;Name=WP_000719463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719452.1;locus_tag=D5F92_RS07150;product=ABC transporter substrate-binding protein;protein_id=WP_000719463.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 28907 29701 . - . ID=gene-D5F92_RS07155;Name=D5F92_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07155;old_locus_tag=D5F92_07170 NZ_QYTJ01000034.1 Protein Homology CDS 28907 29701 . - 0 ID=cds-WP_000018231.1;Parent=gene-D5F92_RS07155;Dbxref=GenBank:WP_000018231.1;Name=WP_000018231.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018231.1;locus_tag=D5F92_RS07155;product=ABC transporter ATP-binding protein;protein_id=WP_000018231.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 29857 31311 . - . ID=gene-D5F92_RS07160;Name=D5F92_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07160;old_locus_tag=D5F92_07175 NZ_QYTJ01000034.1 Protein Homology CDS 29857 31311 . - 0 ID=cds-WP_086163403.1;Parent=gene-D5F92_RS07160;Dbxref=GenBank:WP_086163403.1;Name=WP_086163403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628279.1;locus_tag=D5F92_RS07160;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_086163403.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 31435 33069 . + . ID=gene-D5F92_RS07165;Name=D5F92_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07165;old_locus_tag=D5F92_07180 NZ_QYTJ01000034.1 Protein Homology CDS 31435 33069 . + 0 ID=cds-WP_016503018.1;Parent=gene-D5F92_RS07165;Dbxref=GenBank:WP_016503018.1;Name=WP_016503018.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080010.1;locus_tag=D5F92_RS07165;product=putative polysaccharide biosynthesis protein;protein_id=WP_016503018.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 33204 34424 . + . ID=gene-D5F92_RS07170;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=D5F92_RS07170;old_locus_tag=D5F92_07185 NZ_QYTJ01000034.1 Protein Homology CDS 33204 34424 . + 0 ID=cds-WP_000119591.1;Parent=gene-D5F92_RS07170;Dbxref=GenBank:WP_000119591.1;Name=WP_000119591.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119594.1;locus_tag=D5F92_RS07170;product=peptidase T;protein_id=WP_000119591.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 34453 34944 . + . ID=gene-D5F92_RS07175;Name=D5F92_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07175;old_locus_tag=D5F92_07190 NZ_QYTJ01000034.1 Protein Homology CDS 34453 34944 . + 0 ID=cds-WP_000593175.1;Parent=gene-D5F92_RS07175;Dbxref=GenBank:WP_000593175.1;Name=WP_000593175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767875.1;locus_tag=D5F92_RS07175;product=EbsA family protein;protein_id=WP_000593175.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 34931 35128 . - . ID=gene-D5F92_RS07180;Name=D5F92_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07180;old_locus_tag=D5F92_07195 NZ_QYTJ01000034.1 Protein Homology CDS 34931 35128 . - 0 ID=cds-WP_016480988.1;Parent=gene-D5F92_RS07180;Dbxref=GenBank:WP_016480988.1;Name=WP_016480988.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480988.1;locus_tag=D5F92_RS07180;product=ferredoxin;protein_id=WP_016480988.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 35174 35698 . + . ID=gene-D5F92_RS07185;Name=D5F92_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07185;old_locus_tag=D5F92_07200 NZ_QYTJ01000034.1 Protein Homology CDS 35174 35698 . + 0 ID=cds-WP_001085534.1;Parent=gene-D5F92_RS07185;Dbxref=GenBank:WP_001085534.1;Name=WP_001085534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085531.1;locus_tag=D5F92_RS07185;product=SAG1386/EF1546 family surface-associated protein;protein_id=WP_001085534.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 35709 36392 . + . ID=gene-D5F92_RS07190;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=D5F92_RS07190;old_locus_tag=D5F92_07205 NZ_QYTJ01000034.1 Protein Homology CDS 35709 36392 . + 0 ID=cds-WP_001084720.1;Parent=gene-D5F92_RS07190;Dbxref=GenBank:WP_001084720.1;Name=WP_001084720.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771740.1;locus_tag=D5F92_RS07190;product=(d)CMP kinase;protein_id=WP_001084720.1;transl_table=11 NZ_QYTJ01000034.1 cmsearch sequence_feature 36413 36538 . + . ID=id-NZ_QYTJ01000034.1:36413..36538;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTJ01000034.1 RefSeq gene 36553 37083 . + . ID=gene-D5F92_RS07195;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=D5F92_RS07195;old_locus_tag=D5F92_07210 NZ_QYTJ01000034.1 Protein Homology CDS 36553 37083 . + 0 ID=cds-WP_000691023.1;Parent=gene-D5F92_RS07195;Dbxref=GenBank:WP_000691023.1;Name=WP_000691023.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011226065.1;locus_tag=D5F92_RS07195;product=translation initiation factor IF-3;protein_id=WP_000691023.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 37123 37323 . + . ID=gene-D5F92_RS07200;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=D5F92_RS07200;old_locus_tag=D5F92_07215 NZ_QYTJ01000034.1 Protein Homology CDS 37123 37323 . + 0 ID=cds-WP_001125940.1;Parent=gene-D5F92_RS07200;Dbxref=GenBank:WP_001125940.1;Name=WP_001125940.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=D5F92_RS07200;product=50S ribosomal protein L35;protein_id=WP_001125940.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 37381 37740 . + . ID=gene-D5F92_RS07205;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=D5F92_RS07205;old_locus_tag=D5F92_07220 NZ_QYTJ01000034.1 Protein Homology CDS 37381 37740 . + 0 ID=cds-WP_000124839.1;Parent=gene-D5F92_RS07205;Dbxref=GenBank:WP_000124839.1;Name=WP_000124839.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=D5F92_RS07205;product=50S ribosomal protein L20;protein_id=WP_000124839.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 37982 40126 . - . ID=gene-D5F92_RS07210;Name=D5F92_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07210;old_locus_tag=D5F92_07225 NZ_QYTJ01000034.1 Protein Homology CDS 37982 40126 . - 0 ID=cds-WP_016503017.1;Parent=gene-D5F92_RS07210;Dbxref=GenBank:WP_016503017.1;Name=WP_016503017.1;Ontology_term=GO:0070395;gbkey=CDS;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768074.1;locus_tag=D5F92_RS07210;product=LTA synthase family protein;protein_id=WP_016503017.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 40261 41418 . + . ID=gene-D5F92_RS07215;Name=D5F92_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07215;old_locus_tag=D5F92_07230 NZ_QYTJ01000034.1 Protein Homology CDS 40261 41418 . + 0 ID=cds-WP_016503016.1;Parent=gene-D5F92_RS07215;Dbxref=GenBank:WP_016503016.1;Name=WP_016503016.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037602.1;locus_tag=D5F92_RS07215;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_016503016.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 41418 42095 . + . ID=gene-D5F92_RS07220;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=D5F92_RS07220;old_locus_tag=D5F92_07235 NZ_QYTJ01000034.1 Protein Homology CDS 41418 42095 . + 0 ID=cds-WP_000707048.1;Parent=gene-D5F92_RS07220;Dbxref=GenBank:WP_000707048.1;Name=WP_000707048.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767486.1;locus_tag=D5F92_RS07220;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000707048.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 42189 43256 . + . ID=gene-D5F92_RS07225;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=D5F92_RS07225;old_locus_tag=D5F92_07240 NZ_QYTJ01000034.1 Protein Homology CDS 42189 43256 . + 0 ID=cds-WP_016503015.1;Parent=gene-D5F92_RS07225;Dbxref=GenBank:WP_016503015.1;Name=WP_016503015.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195728.1;locus_tag=D5F92_RS07225;product=3-dehydroquinate synthase;protein_id=WP_016503015.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 43257 44423 . + . ID=gene-D5F92_RS07230;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=D5F92_RS07230;old_locus_tag=D5F92_07245 NZ_QYTJ01000034.1 Protein Homology CDS 43257 44423 . + 0 ID=cds-WP_016503014.1;Parent=gene-D5F92_RS07230;Dbxref=GenBank:WP_016503014.1;Name=WP_016503014.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503014.1;locus_tag=D5F92_RS07230;product=chorismate synthase;protein_id=WP_016503014.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 44507 44842 . + . ID=gene-D5F92_RS07235;Name=D5F92_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07235;old_locus_tag=D5F92_07250 NZ_QYTJ01000034.1 Protein Homology CDS 44507 44842 . + 0 ID=cds-WP_000024627.1;Parent=gene-D5F92_RS07235;Dbxref=GenBank:WP_000024627.1;Name=WP_000024627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024621.1;locus_tag=D5F92_RS07235;product=YlbF/YmcA family competence regulator;protein_id=WP_000024627.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 45017 46366 . + . ID=gene-D5F92_RS07240;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=D5F92_RS07240;old_locus_tag=D5F92_07255 NZ_QYTJ01000034.1 Protein Homology CDS 45017 46366 . + 0 ID=cds-WP_016503013.1;Parent=gene-D5F92_RS07240;Dbxref=GenBank:WP_016503013.1;Name=WP_016503013.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632110.1;locus_tag=D5F92_RS07240;product=glutathione-disulfide reductase;protein_id=WP_016503013.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 46409 46861 . - . ID=gene-D5F92_RS07245;Name=D5F92_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07245;old_locus_tag=D5F92_07260 NZ_QYTJ01000034.1 Protein Homology CDS 46409 46861 . - 0 ID=cds-WP_000033716.1;Parent=gene-D5F92_RS07245;Dbxref=GenBank:WP_000033716.1;Name=WP_000033716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033712.1;locus_tag=D5F92_RS07245;product=DUF6556 family protein;protein_id=WP_000033716.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 47113 48258 . + . ID=gene-D5F92_RS07250;Name=D5F92_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07250;old_locus_tag=D5F92_07265 NZ_QYTJ01000034.1 Protein Homology CDS 47113 48258 . + 0 ID=cds-WP_016503012.1;Parent=gene-D5F92_RS07250;Dbxref=GenBank:WP_016503012.1;Name=WP_016503012.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638894.1;locus_tag=D5F92_RS07250;product=cysteine desulfurase family protein;protein_id=WP_016503012.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 48260 49474 . + . ID=gene-D5F92_RS07255;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=D5F92_RS07255;old_locus_tag=D5F92_07270 NZ_QYTJ01000034.1 Protein Homology CDS 48260 49474 . + 0 ID=cds-WP_001200110.1;Parent=gene-D5F92_RS07255;Dbxref=GenBank:WP_001200110.1;Name=WP_001200110.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200101.1;locus_tag=D5F92_RS07255;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_001200110.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 49576 50754 . + . ID=gene-D5F92_RS07260;Name=D5F92_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07260;old_locus_tag=D5F92_07275 NZ_QYTJ01000034.1 Protein Homology CDS 49576 50754 . + 0 ID=cds-WP_000101227.1;Parent=gene-D5F92_RS07260;Dbxref=GenBank:WP_000101227.1;Name=WP_000101227.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101234.1;locus_tag=D5F92_RS07260;product=CapA family protein;protein_id=WP_000101227.1;transl_table=11 NZ_QYTJ01000034.1 cmsearch sequence_feature 50830 50909 . + . ID=id-NZ_QYTJ01000034.1:50830..50909;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTJ01000034.1 RefSeq gene 50944 51258 . + . ID=gene-D5F92_RS07265;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=D5F92_RS07265;old_locus_tag=D5F92_07280 NZ_QYTJ01000034.1 Protein Homology CDS 50944 51258 . + 0 ID=cds-WP_000109135.1;Parent=gene-D5F92_RS07265;Dbxref=GenBank:WP_000109135.1;Name=WP_000109135.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=D5F92_RS07265;product=50S ribosomal protein L21;protein_id=WP_000109135.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 51265 51603 . + . ID=gene-D5F92_RS07270;Name=D5F92_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07270;old_locus_tag=D5F92_07285 NZ_QYTJ01000034.1 Protein Homology CDS 51265 51603 . + 0 ID=cds-WP_000588480.1;Parent=gene-D5F92_RS07270;Dbxref=GenBank:WP_000588480.1;Name=WP_000588480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588481.1;locus_tag=D5F92_RS07270;product=ribosomal-processing cysteine protease Prp;protein_id=WP_000588480.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 51625 51918 . + . ID=gene-D5F92_RS07275;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=D5F92_RS07275;old_locus_tag=D5F92_07290 NZ_QYTJ01000034.1 Protein Homology CDS 51625 51918 . + 0 ID=cds-WP_000916503.1;Parent=gene-D5F92_RS07275;Dbxref=GenBank:WP_000916503.1;Name=WP_000916503.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=D5F92_RS07275;product=50S ribosomal protein L27;protein_id=WP_000916503.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 52134 53039 . + . ID=gene-D5F92_RS07280;Name=D5F92_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07280;old_locus_tag=D5F92_07295 NZ_QYTJ01000034.1 Protein Homology CDS 52134 53039 . + 0 ID=cds-WP_001025683.1;Parent=gene-D5F92_RS07280;Dbxref=GenBank:WP_001025683.1;Name=WP_001025683.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646939.1;locus_tag=D5F92_RS07280;product=LysR family transcriptional regulator;protein_id=WP_001025683.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 53048 53512 . + . ID=gene-D5F92_RS07285;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=D5F92_RS07285;old_locus_tag=D5F92_07300 NZ_QYTJ01000034.1 Protein Homology CDS 53048 53512 . + 0 ID=cds-WP_001226253.1;Parent=gene-D5F92_RS07285;Dbxref=GenBank:WP_001226253.1;Name=WP_001226253.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226252.1;locus_tag=D5F92_RS07285;product=signal peptidase II;protein_id=WP_001226253.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 53496 54386 . + . ID=gene-D5F92_RS07290;Name=D5F92_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07290;old_locus_tag=D5F92_07305 NZ_QYTJ01000034.1 Protein Homology CDS 53496 54386 . + 0 ID=cds-WP_016503010.1;Parent=gene-D5F92_RS07290;Dbxref=GenBank:WP_016503010.1;Name=WP_016503010.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406595.1;locus_tag=D5F92_RS07290;product=RluA family pseudouridine synthase;protein_id=WP_016503010.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 54562 55083 . + . ID=gene-D5F92_RS07295;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=D5F92_RS07295;old_locus_tag=D5F92_07310 NZ_QYTJ01000034.1 Protein Homology CDS 54562 55083 . + 0 ID=cds-WP_000823056.1;Parent=gene-D5F92_RS07295;Dbxref=GenBank:WP_000823056.1;Name=WP_000823056.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823056.1;locus_tag=D5F92_RS07295;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_000823056.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 55132 56202 . + . ID=gene-D5F92_RS07300;Name=D5F92_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07300;old_locus_tag=D5F92_07315 NZ_QYTJ01000034.1 Protein Homology CDS 55132 56202 . + 0 ID=cds-WP_001085243.1;Parent=gene-D5F92_RS07300;Dbxref=GenBank:WP_001085243.1;Name=WP_001085243.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480977.1;locus_tag=D5F92_RS07300;product=carbamoyl phosphate synthase small subunit;protein_id=WP_001085243.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 56258 57856 . + . ID=gene-D5F92_RS07305;Name=D5F92_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07305;old_locus_tag=D5F92_07320 NZ_QYTJ01000034.1 Protein Homology CDS 56258 57856 . + 0 ID=cds-WP_086163401.1;Parent=gene-D5F92_RS07305;Dbxref=GenBank:WP_086163401.1;Name=WP_086163401.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771827.1;locus_tag=D5F92_RS07305;product=ATP-binding protein;protein_id=WP_086163401.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 58065 59309 . + . ID=gene-D5F92_RS07310;Name=D5F92_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07310;old_locus_tag=D5F92_07325 NZ_QYTJ01000034.1 Protein Homology CDS 58065 59309 . + 0 ID=cds-WP_016503007.1;Parent=gene-D5F92_RS07310;Dbxref=GenBank:WP_016503007.1;Name=WP_016503007.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058633.1;locus_tag=D5F92_RS07310;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_016503007.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 59312 60022 . + . ID=gene-D5F92_RS07315;Name=D5F92_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07315;old_locus_tag=D5F92_07330 NZ_QYTJ01000034.1 Protein Homology CDS 59312 60022 . + 0 ID=cds-WP_016503006.1;Parent=gene-D5F92_RS07315;Dbxref=GenBank:WP_016503006.1;Name=WP_016503006.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210672.1;locus_tag=D5F92_RS07315;product=ABC transporter ATP-binding protein;protein_id=WP_016503006.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 60037 61284 . + . ID=gene-D5F92_RS07320;Name=D5F92_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07320;old_locus_tag=D5F92_07335 NZ_QYTJ01000034.1 Protein Homology CDS 60037 61284 . + 0 ID=cds-WP_000432854.1;Parent=gene-D5F92_RS07320;Dbxref=GenBank:WP_000432854.1;Name=WP_000432854.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432854.1;locus_tag=D5F92_RS07320;product=ABC transporter permease;protein_id=WP_000432854.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 61413 61685 . + . ID=gene-D5F92_RS07325;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=D5F92_RS07325;old_locus_tag=D5F92_07340 NZ_QYTJ01000034.1 Protein Homology CDS 61413 61685 . + 0 ID=cds-WP_000268757.1;Parent=gene-D5F92_RS07325;Dbxref=GenBank:WP_000268757.1;Name=WP_000268757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=D5F92_RS07325;product=30S ribosomal protein S16;protein_id=WP_000268757.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 61695 61937 . + . ID=gene-D5F92_RS07330;Name=D5F92_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07330;old_locus_tag=D5F92_07345 NZ_QYTJ01000034.1 Protein Homology CDS 61695 61937 . + 0 ID=cds-WP_000379626.1;Parent=gene-D5F92_RS07330;Dbxref=GenBank:WP_000379626.1;Name=WP_000379626.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379626.1;locus_tag=D5F92_RS07330;product=KH domain-containing protein;protein_id=WP_000379626.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 62069 63580 . + . ID=gene-D5F92_RS07335;Name=D5F92_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07335;old_locus_tag=D5F92_07350 NZ_QYTJ01000034.1 Protein Homology CDS 62069 63580 . + 0 ID=cds-WP_000895678.1;Parent=gene-D5F92_RS07335;Dbxref=GenBank:WP_000895678.1;Name=WP_000895678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771680.1;locus_tag=D5F92_RS07335;product=M protein trans-acting positive regulator PRD domain-containing protein;protein_id=WP_000895678.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 63688 63759 . + . ID=gene-D5F92_RS07340;Name=D5F92_RS07340;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07340;old_locus_tag=D5F92_07355 NZ_QYTJ01000034.1 tRNAscan-SE tRNA 63688 63759 . + . ID=rna-D5F92_RS07340;Parent=gene-D5F92_RS07340;anticodon=(pos:63720..63722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07340;product=tRNA-Gln NZ_QYTJ01000034.1 tRNAscan-SE exon 63688 63759 . + . ID=exon-D5F92_RS07340-1;Parent=rna-D5F92_RS07340;anticodon=(pos:63720..63722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07340;product=tRNA-Gln NZ_QYTJ01000034.1 RefSeq gene 63768 63839 . + . ID=gene-D5F92_RS07345;Name=D5F92_RS07345;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07345;old_locus_tag=D5F92_07360 NZ_QYTJ01000034.1 tRNAscan-SE tRNA 63768 63839 . + . ID=rna-D5F92_RS07345;Parent=gene-D5F92_RS07345;anticodon=(pos:63801..63803);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07345;product=tRNA-Glu NZ_QYTJ01000034.1 tRNAscan-SE exon 63768 63839 . + . ID=exon-D5F92_RS07345-1;Parent=rna-D5F92_RS07345;anticodon=(pos:63801..63803);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07345;product=tRNA-Glu NZ_QYTJ01000034.1 RefSeq gene 63902 64420 . + . ID=gene-D5F92_RS07350;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=D5F92_RS07350;old_locus_tag=D5F92_07365 NZ_QYTJ01000034.1 Protein Homology CDS 63902 64420 . + 0 ID=cds-WP_000455623.1;Parent=gene-D5F92_RS07350;Dbxref=GenBank:WP_000455623.1;Name=WP_000455623.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465641.1;locus_tag=D5F92_RS07350;product=ribosome maturation factor RimM;protein_id=WP_000455623.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 64407 65162 . + . ID=gene-D5F92_RS07355;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=D5F92_RS07355;old_locus_tag=D5F92_07370 NZ_QYTJ01000034.1 Protein Homology CDS 64407 65162 . + 0 ID=cds-WP_000975542.1;Parent=gene-D5F92_RS07355;Dbxref=GenBank:WP_000975542.1;Name=WP_000975542.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647815.1;locus_tag=D5F92_RS07355;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000975542.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 65143 66135 . + . ID=gene-D5F92_RS07360;Name=D5F92_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07360;old_locus_tag=D5F92_07375 NZ_QYTJ01000034.1 Protein Homology CDS 65143 66135 . + 0 ID=cds-WP_016503002.1;Parent=gene-D5F92_RS07360;Dbxref=GenBank:WP_016503002.1;Name=WP_016503002.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285367.1;locus_tag=D5F92_RS07360;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016503002.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 66272 67342 . + . ID=gene-D5F92_RS07365;Name=D5F92_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07365;old_locus_tag=D5F92_07380 NZ_QYTJ01000034.1 Protein Homology CDS 66272 67342 . + 0 ID=cds-WP_000185919.1;Parent=gene-D5F92_RS07365;Dbxref=GenBank:WP_000185919.1;Name=WP_000185919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185923.1;locus_tag=D5F92_RS07365;product=PTS sugar transporter subunit IIC;protein_id=WP_000185919.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 67355 68278 . + . ID=gene-D5F92_RS07370;Name=D5F92_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07370;old_locus_tag=D5F92_07385 NZ_QYTJ01000034.1 Protein Homology CDS 67355 68278 . + 0 ID=cds-WP_000964162.1;Parent=gene-D5F92_RS07370;Dbxref=GenBank:WP_000964162.1;Name=WP_000964162.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964166.1;locus_tag=D5F92_RS07370;product=2-dehydropantoate 2-reductase;protein_id=WP_000964162.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq pseudogene 68490 70124 . + . ID=gene-D5F92_RS07375;Name=D5F92_RS07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07375;old_locus_tag=D5F92_07390;pseudo=true NZ_QYTJ01000034.1 Protein Homology CDS 68490 70124 . + 0 ID=cds-D5F92_RS07375;Parent=gene-D5F92_RS07375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976031.1;locus_tag=D5F92_RS07375;product=SH3 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 70268 71503 . + . ID=gene-D5F92_RS07385;Name=D5F92_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07385;old_locus_tag=D5F92_07400 NZ_QYTJ01000034.1 Protein Homology CDS 70268 71503 . + 0 ID=cds-WP_124749523.1;Parent=gene-D5F92_RS07385;Dbxref=GenBank:WP_124749523.1;Name=WP_124749523.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175197.1;locus_tag=D5F92_RS07385;product=aminoacyltransferase;protein_id=WP_124749523.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 71634 72377 . + . ID=gene-D5F92_RS07390;Name=D5F92_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07390;old_locus_tag=D5F92_07405 NZ_QYTJ01000034.1 Protein Homology CDS 71634 72377 . + 0 ID=cds-WP_000920253.1;Parent=gene-D5F92_RS07390;Dbxref=GenBank:WP_000920253.1;Name=WP_000920253.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920251.1;locus_tag=D5F92_RS07390;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000920253.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 72374 73285 . + . ID=gene-D5F92_RS07395;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=D5F92_RS07395;old_locus_tag=D5F92_07410 NZ_QYTJ01000034.1 Protein Homology CDS 72374 73285 . + 0 ID=cds-WP_000640762.1;Parent=gene-D5F92_RS07395;Dbxref=GenBank:WP_000640762.1;Name=WP_000640762.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284863.1;locus_tag=D5F92_RS07395;product=1-phosphofructokinase;protein_id=WP_000640762.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 73282 75246 . + . ID=gene-D5F92_RS07400;Name=D5F92_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07400;old_locus_tag=D5F92_07415 NZ_QYTJ01000034.1 Protein Homology CDS 73282 75246 . + 0 ID=cds-WP_124749151.1;Parent=gene-D5F92_RS07400;Dbxref=GenBank:WP_124749151.1;Name=WP_124749151.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771056.1;locus_tag=D5F92_RS07400;product=PTS fructose transporter subunit IIABC;protein_id=WP_124749151.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 75435 75929 . + . ID=gene-D5F92_RS07405;Name=D5F92_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07405;old_locus_tag=D5F92_07420 NZ_QYTJ01000034.1 Protein Homology CDS 75435 75929 . + 0 ID=cds-WP_000598909.1;Parent=gene-D5F92_RS07405;Dbxref=GenBank:WP_000598909.1;Name=WP_000598909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598905.1;locus_tag=D5F92_RS07405;product=DUF2127 domain-containing protein;protein_id=WP_000598909.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 75980 76513 . + . ID=gene-D5F92_RS07410;Name=D5F92_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07410;old_locus_tag=D5F92_07425 NZ_QYTJ01000034.1 Protein Homology CDS 75980 76513 . + 0 ID=cds-WP_016502994.1;Parent=gene-D5F92_RS07410;Dbxref=GenBank:WP_016502994.1;Name=WP_016502994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178080.1;locus_tag=D5F92_RS07410;product=hypothetical protein;protein_id=WP_016502994.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 76585 76965 . + . ID=gene-D5F92_RS07415;Name=D5F92_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07415;old_locus_tag=D5F92_07430 NZ_QYTJ01000034.1 Protein Homology CDS 76585 76965 . + 0 ID=cds-WP_000452063.1;Parent=gene-D5F92_RS07415;Dbxref=GenBank:WP_000452063.1;Name=WP_000452063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452064.1;locus_tag=D5F92_RS07415;product=DUF1149 family protein;protein_id=WP_000452063.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 76965 77813 . + . ID=gene-D5F92_RS07420;Name=D5F92_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07420;old_locus_tag=D5F92_07435 NZ_QYTJ01000034.1 Protein Homology CDS 76965 77813 . + 0 ID=cds-WP_086163398.1;Parent=gene-D5F92_RS07420;Dbxref=GenBank:WP_086163398.1;Name=WP_086163398.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058626.1;locus_tag=D5F92_RS07420;product=DegV family protein;protein_id=WP_086163398.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 77998 79206 . + . ID=gene-D5F92_RS07425;Name=D5F92_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07425;old_locus_tag=D5F92_07440 NZ_QYTJ01000034.1 Protein Homology CDS 77998 79206 . + 0 ID=cds-WP_001238954.1;Parent=gene-D5F92_RS07425;Dbxref=GenBank:WP_001238954.1;Name=WP_001238954.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285349.1;locus_tag=D5F92_RS07425;product=CCA tRNA nucleotidyltransferase;protein_id=WP_001238954.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 79217 81085 . + . ID=gene-D5F92_RS07430;Name=D5F92_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07430;old_locus_tag=D5F92_07445 NZ_QYTJ01000034.1 Protein Homology CDS 79217 81085 . + 0 ID=cds-WP_016502993.1;Parent=gene-D5F92_RS07430;Dbxref=GenBank:WP_016502993.1;Name=WP_016502993.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649433.1;locus_tag=D5F92_RS07430;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_016502993.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 81082 81555 . + . ID=gene-D5F92_RS07435;Name=D5F92_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07435;old_locus_tag=D5F92_07450 NZ_QYTJ01000034.1 Protein Homology CDS 81082 81555 . + 0 ID=cds-WP_000586888.1;Parent=gene-D5F92_RS07435;Dbxref=GenBank:WP_000586888.1;Name=WP_000586888.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502992.1;locus_tag=D5F92_RS07435;product=GNAT family N-acetyltransferase;protein_id=WP_000586888.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 81622 83361 . + . ID=gene-D5F92_RS07440;Name=D5F92_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07440;old_locus_tag=D5F92_07455 NZ_QYTJ01000034.1 Protein Homology CDS 81622 83361 . + 0 ID=cds-WP_086163397.1;Parent=gene-D5F92_RS07440;Dbxref=GenBank:WP_086163397.1;Name=WP_086163397.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480964.1;locus_tag=D5F92_RS07440;product=ABC transporter ATP-binding protein;protein_id=WP_086163397.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 83366 85135 . + . ID=gene-D5F92_RS07445;Name=D5F92_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07445;old_locus_tag=D5F92_07460 NZ_QYTJ01000034.1 Protein Homology CDS 83366 85135 . + 0 ID=cds-WP_016502989.1;Parent=gene-D5F92_RS07445;Dbxref=GenBank:WP_016502989.1;Name=WP_016502989.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480963.1;locus_tag=D5F92_RS07445;product=ABC transporter ATP-binding protein;protein_id=WP_016502989.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 85176 85685 . - . ID=gene-D5F92_RS07450;Name=D5F92_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07450;old_locus_tag=D5F92_07465 NZ_QYTJ01000034.1 Protein Homology CDS 85176 85685 . - 0 ID=cds-WP_016502988.1;Parent=gene-D5F92_RS07450;Dbxref=GenBank:WP_016502988.1;Name=WP_016502988.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771981.1;locus_tag=D5F92_RS07450;product=HdeD family acid-resistance protein;protein_id=WP_016502988.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 85853 87202 . + . ID=gene-D5F92_RS07455;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=D5F92_RS07455;old_locus_tag=D5F92_07470 NZ_QYTJ01000034.1 Protein Homology CDS 85853 87202 . + 0 ID=cds-WP_086163396.1;Parent=gene-D5F92_RS07455;Dbxref=GenBank:WP_086163396.1;Name=WP_086163396.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647818.1;locus_tag=D5F92_RS07455;product=NADP-specific glutamate dehydrogenase;protein_id=WP_086163396.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 87272 87682 . + . ID=gene-D5F92_RS07460;Name=D5F92_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07460;old_locus_tag=D5F92_07475 NZ_QYTJ01000034.1 Protein Homology CDS 87272 87682 . + 0 ID=cds-WP_016502986.1;Parent=gene-D5F92_RS07460;Dbxref=GenBank:WP_016502986.1;Name=WP_016502986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502986.1;locus_tag=D5F92_RS07460;product=peptide deformylase;protein_id=WP_016502986.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 87719 89791 . - . ID=gene-D5F92_RS07465;Name=D5F92_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07465;old_locus_tag=D5F92_07480 NZ_QYTJ01000034.1 Protein Homology CDS 87719 89791 . - 0 ID=cds-WP_124785504.1;Parent=gene-D5F92_RS07465;Dbxref=GenBank:WP_124785504.1;Name=WP_124785504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650655.1;locus_tag=D5F92_RS07465;product=surface-anchored 5'-nucleotidase;protein_id=WP_124785504.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 90060 90500 . + . ID=gene-D5F92_RS07470;Name=D5F92_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07470;old_locus_tag=D5F92_07485 NZ_QYTJ01000034.1 Protein Homology CDS 90060 90500 . + 0 ID=cds-WP_000431168.1;Parent=gene-D5F92_RS07470;Dbxref=GenBank:WP_000431168.1;Name=WP_000431168.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771881.1;locus_tag=D5F92_RS07470;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000431168.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 90547 92364 . + . ID=gene-D5F92_RS07475;Name=D5F92_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07475;old_locus_tag=D5F92_07490 NZ_QYTJ01000034.1 Protein Homology CDS 90547 92364 . + 0 ID=cds-WP_016502983.1;Parent=gene-D5F92_RS07475;Dbxref=GenBank:WP_016502983.1;Name=WP_016502983.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481821.1;locus_tag=D5F92_RS07475;product=ABC transporter ATP-binding protein;protein_id=WP_016502983.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 92354 94108 . + . ID=gene-D5F92_RS07480;Name=D5F92_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07480;old_locus_tag=D5F92_07495 NZ_QYTJ01000034.1 Protein Homology CDS 92354 94108 . + 0 ID=cds-WP_086163394.1;Parent=gene-D5F92_RS07480;Dbxref=GenBank:WP_086163394.1;Name=WP_086163394.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000851082.1;locus_tag=D5F92_RS07480;product=ABC transporter ATP-binding protein;protein_id=WP_086163394.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 94216 94842 . + . ID=gene-D5F92_RS07485;Name=D5F92_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07485;old_locus_tag=D5F92_07500 NZ_QYTJ01000034.1 Protein Homology CDS 94216 94842 . + 0 ID=cds-WP_000449636.1;Parent=gene-D5F92_RS07485;Dbxref=GenBank:WP_000449636.1;Name=WP_000449636.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449638.1;locus_tag=D5F92_RS07485;product=GTP pyrophosphokinase;protein_id=WP_000449636.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 94844 95530 . + . ID=gene-D5F92_RS07490;Name=D5F92_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07490;old_locus_tag=D5F92_07505 NZ_QYTJ01000034.1 Protein Homology CDS 94844 95530 . + 0 ID=cds-WP_001264420.1;Parent=gene-D5F92_RS07490;Dbxref=GenBank:WP_001264420.1;Name=WP_001264420.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632090.1;locus_tag=D5F92_RS07490;product=response regulator transcription factor;protein_id=WP_001264420.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 95530 96759 . + . ID=gene-D5F92_RS07495;Name=D5F92_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07495;old_locus_tag=D5F92_07510 NZ_QYTJ01000034.1 Protein Homology CDS 95530 96759 . + 0 ID=cds-WP_000489523.1;Parent=gene-D5F92_RS07495;Dbxref=GenBank:WP_000489523.1;Name=WP_000489523.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489520.1;locus_tag=D5F92_RS07495;product=sensor histidine kinase;protein_id=WP_000489523.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 96875 97753 . + . ID=gene-D5F92_RS07500;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=D5F92_RS07500;old_locus_tag=D5F92_07515 NZ_QYTJ01000034.1 Protein Homology CDS 96875 97753 . + 0 ID=cds-WP_000659719.1;Parent=gene-D5F92_RS07500;Dbxref=GenBank:WP_000659719.1;Name=WP_000659719.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659716.1;locus_tag=D5F92_RS07500;product=mevalonate kinase;protein_id=WP_000659719.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 97735 98679 . + . ID=gene-D5F92_RS07505;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=D5F92_RS07505;old_locus_tag=D5F92_07520 NZ_QYTJ01000034.1 Protein Homology CDS 97735 98679 . + 0 ID=cds-WP_000348814.1;Parent=gene-D5F92_RS07505;Dbxref=GenBank:WP_000348814.1;Name=WP_000348814.1;Ontology_term=GO:0019287,GO:0004163,GO:0005829;gbkey=CDS;gene=mvaD;go_component=cytosol|0005829||IEA;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348814.1;locus_tag=D5F92_RS07505;product=diphosphomevalonate decarboxylase;protein_id=WP_000348814.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 98672 99664 . + . ID=gene-D5F92_RS07510;Name=D5F92_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07510;old_locus_tag=D5F92_07525 NZ_QYTJ01000034.1 Protein Homology CDS 98672 99664 . + 0 ID=cds-WP_000241525.1;Parent=gene-D5F92_RS07510;Dbxref=GenBank:WP_000241525.1;Name=WP_000241525.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241525.1;locus_tag=D5F92_RS07510;product=phosphomevalonate kinase;protein_id=WP_000241525.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 99661 100656 . + . ID=gene-D5F92_RS07515;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=D5F92_RS07515;old_locus_tag=D5F92_07530 NZ_QYTJ01000034.1 Protein Homology CDS 99661 100656 . + 0 ID=cds-WP_016502978.1;Parent=gene-D5F92_RS07515;Dbxref=GenBank:WP_016502978.1;Name=WP_016502978.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184890.1;locus_tag=D5F92_RS07515;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_016502978.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 100724 100942 . + . ID=gene-D5F92_RS07520;Name=D5F92_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07520;old_locus_tag=D5F92_07535 NZ_QYTJ01000034.1 Protein Homology CDS 100724 100942 . + 0 ID=cds-WP_000594209.1;Parent=gene-D5F92_RS07520;Dbxref=GenBank:WP_000594209.1;Name=WP_000594209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594209.1;locus_tag=D5F92_RS07520;product=DUF4649 family protein;protein_id=WP_000594209.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 100988 101842 . - . ID=gene-D5F92_RS07525;Name=D5F92_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07525;old_locus_tag=D5F92_07540 NZ_QYTJ01000034.1 Protein Homology CDS 100988 101842 . - 0 ID=cds-WP_086163393.1;Parent=gene-D5F92_RS07525;Dbxref=GenBank:WP_086163393.1;Name=WP_086163393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206687.1;locus_tag=D5F92_RS07525;product=glutathione S-transferase C-terminal domain-containing protein;protein_id=WP_086163393.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 101943 102857 . - . ID=gene-D5F92_RS07530;Name=D5F92_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07530;old_locus_tag=D5F92_07545 NZ_QYTJ01000034.1 Protein Homology CDS 101943 102857 . - 0 ID=cds-WP_016502976.1;Parent=gene-D5F92_RS07530;Dbxref=GenBank:WP_016502976.1;Name=WP_016502976.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646993.1;locus_tag=D5F92_RS07530;product=diacylglycerol/lipid kinase family protein;protein_id=WP_016502976.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 102944 103600 . - . ID=gene-D5F92_RS07535;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=D5F92_RS07535;old_locus_tag=D5F92_07550 NZ_QYTJ01000034.1 Protein Homology CDS 102944 103600 . - 0 ID=cds-WP_000910676.1;Parent=gene-D5F92_RS07535;Dbxref=GenBank:WP_000910676.1;Name=WP_000910676.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000910676.1;locus_tag=D5F92_RS07535;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000910676.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 103593 104042 . - . ID=gene-D5F92_RS07540;Name=D5F92_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07540;old_locus_tag=D5F92_07555 NZ_QYTJ01000034.1 Protein Homology CDS 103593 104042 . - 0 ID=cds-WP_016502975.1;Parent=gene-D5F92_RS07540;Dbxref=GenBank:WP_016502975.1;Name=WP_016502975.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039194.1;locus_tag=D5F92_RS07540;product=DUF1836 domain-containing protein;protein_id=WP_016502975.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 104134 105417 . - . ID=gene-D5F92_RS07545;Name=D5F92_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07545;old_locus_tag=D5F92_07560 NZ_QYTJ01000034.1 Protein Homology CDS 104134 105417 . - 0 ID=cds-WP_086163392.1;Parent=gene-D5F92_RS07545;Dbxref=GenBank:WP_086163392.1;Name=WP_086163392.1;Ontology_term=GO:0015936,GO:0004420,GO:0016616;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=coenzyme A metabolic process|0015936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647340.1;locus_tag=D5F92_RS07545;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_086163392.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 105419 106591 . - . ID=gene-D5F92_RS07550;Name=D5F92_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07550;old_locus_tag=D5F92_07565 NZ_QYTJ01000034.1 Protein Homology CDS 105419 106591 . - 0 ID=cds-WP_001873466.1;Parent=gene-D5F92_RS07550;Dbxref=GenBank:WP_001873466.1;Name=WP_001873466.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001923259.1;locus_tag=D5F92_RS07550;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_001873466.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 106745 107584 . + . ID=gene-D5F92_RS07555;Name=D5F92_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07555;old_locus_tag=D5F92_07570 NZ_QYTJ01000034.1 Protein Homology CDS 106745 107584 . + 0 ID=cds-WP_000158595.1;Parent=gene-D5F92_RS07555;Dbxref=GenBank:WP_000158595.1;Name=WP_000158595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632084.1;locus_tag=D5F92_RS07555;product=thymidylate synthase;protein_id=WP_000158595.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 107664 108158 . + . ID=gene-D5F92_RS07560;Name=D5F92_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07560;old_locus_tag=D5F92_07575 NZ_QYTJ01000034.1 Protein Homology CDS 107664 108158 . + 0 ID=cds-WP_124749519.1;Parent=gene-D5F92_RS07560;Dbxref=GenBank:WP_124749519.1;Name=WP_124749519.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166044.1;locus_tag=D5F92_RS07560;product=dihydrofolate reductase;protein_id=WP_124749519.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 108376 109602 . + . ID=gene-D5F92_RS07570;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=D5F92_RS07570;old_locus_tag=D5F92_07585 NZ_QYTJ01000034.1 Protein Homology CDS 108376 109602 . + 0 ID=cds-WP_000918415.1;Parent=gene-D5F92_RS07570;Dbxref=GenBank:WP_000918415.1;Name=WP_000918415.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984948.1;locus_tag=D5F92_RS07570;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_000918415.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 109613 110209 . + . ID=gene-D5F92_RS07575;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=D5F92_RS07575;old_locus_tag=D5F92_07590 NZ_QYTJ01000034.1 Protein Homology CDS 109613 110209 . + 0 ID=cds-WP_000796925.1;Parent=gene-D5F92_RS07575;Dbxref=GenBank:WP_000796925.1;Name=WP_000796925.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796923.1;locus_tag=D5F92_RS07575;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000796925.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 110271 110819 . - . ID=gene-D5F92_RS07580;Name=D5F92_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07580;old_locus_tag=D5F92_07595 NZ_QYTJ01000034.1 Protein Homology CDS 110271 110819 . - 0 ID=cds-WP_086163391.1;Parent=gene-D5F92_RS07580;Dbxref=GenBank:WP_086163391.1;Name=WP_086163391.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140659.1;locus_tag=D5F92_RS07580;product=TetR/AcrR family transcriptional regulator;protein_id=WP_086163391.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 110911 111561 . + . ID=gene-D5F92_RS07590;Name=D5F92_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07590;old_locus_tag=D5F92_07605 NZ_QYTJ01000034.1 Protein Homology CDS 110911 111561 . + 0 ID=cds-WP_016502970.1;Parent=gene-D5F92_RS07590;Dbxref=GenBank:WP_016502970.1;Name=WP_016502970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645479.1;locus_tag=D5F92_RS07590;product=HXXEE domain-containing protein;protein_id=WP_016502970.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq pseudogene 111573 112221 . + . ID=gene-D5F92_RS07595;Name=D5F92_RS07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07595;old_locus_tag=D5F92_07610;pseudo=true NZ_QYTJ01000034.1 Protein Homology CDS 111573 112221 . + 0 ID=cds-D5F92_RS07595;Parent=gene-D5F92_RS07595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120088.1;locus_tag=D5F92_RS07595;product=HXXEE domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 112351 113727 . + . ID=gene-D5F92_RS07600;Name=D5F92_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07600;old_locus_tag=D5F92_07615 NZ_QYTJ01000034.1 Protein Homology CDS 112351 113727 . + 0 ID=cds-WP_000427484.1;Parent=gene-D5F92_RS07600;Dbxref=GenBank:WP_000427484.1;Name=WP_000427484.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058615.1;locus_tag=D5F92_RS07600;product=amino acid permease;protein_id=WP_000427484.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 113732 114676 . + . ID=gene-D5F92_RS07605;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=D5F92_RS07605;old_locus_tag=D5F92_07620 NZ_QYTJ01000034.1 Protein Homology CDS 113732 114676 . + 0 ID=cds-WP_016502966.1;Parent=gene-D5F92_RS07605;Dbxref=GenBank:WP_016502966.1;Name=WP_016502966.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532333.1;locus_tag=D5F92_RS07605;product=homocysteine S-methyltransferase;protein_id=WP_016502966.1;transl_table=11 NZ_QYTJ01000034.1 RefSeq gene 114770 116878 . - . ID=gene-D5F92_RS07610;Name=D5F92_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07610;old_locus_tag=D5F92_07625 NZ_QYTJ01000034.1 Protein Homology CDS 114770 116878 . - 0 ID=cds-WP_016502965.1;Parent=gene-D5F92_RS07610;Dbxref=GenBank:WP_016502965.1;Name=WP_016502965.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002818.1;locus_tag=D5F92_RS07610;product=AAA family ATPase;protein_id=WP_016502965.1;transl_table=11 ##sequence-region NZ_QYTJ01000035.1 1 1392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000035.1 RefSeq region 1 1392 . + . ID=NZ_QYTJ01000035.1:1..1392;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000035.1 RefSeq gene 1 246 . - . ID=gene-D5F92_RS07615;Name=D5F92_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07615;old_locus_tag=D5F92_07630;partial=true;start_range=.,1 NZ_QYTJ01000035.1 Protein Homology CDS 1 246 . - 0 ID=cds-WP_142996891.1;Parent=gene-D5F92_RS07615;Dbxref=GenBank:WP_142996891.1;Name=WP_142996891.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS07615;partial=true;product=transposase;protein_id=WP_142996891.1;start_range=.,1;transl_table=11 NZ_QYTJ01000035.1 RefSeq pseudogene 317 826 . - . ID=gene-D5F92_RS07620;Name=D5F92_RS07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07620;old_locus_tag=D5F92_07635;partial=true;pseudo=true;start_range=.,317 NZ_QYTJ01000035.1 Protein Homology CDS 317 826 . - 0 ID=cds-D5F92_RS07620;Parent=gene-D5F92_RS07620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675283.1;locus_tag=D5F92_RS07620;partial=true;product=histidine phosphatase family protein;pseudo=true;start_range=.,317;transl_table=11 NZ_QYTJ01000035.1 RefSeq gene 848 1321 . - . ID=gene-D5F92_RS07625;Name=D5F92_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07625;old_locus_tag=D5F92_07640 NZ_QYTJ01000035.1 Protein Homology CDS 848 1321 . - 0 ID=cds-WP_000038843.1;Parent=gene-D5F92_RS07625;Dbxref=GenBank:WP_000038843.1;Name=WP_000038843.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058481.1;locus_tag=D5F92_RS07625;product=aminoacyl-tRNA deacylase;protein_id=WP_000038843.1;transl_table=11 ##sequence-region NZ_QYTJ01000036.1 1 19344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000036.1 RefSeq region 1 19344 . + . ID=NZ_QYTJ01000036.1:1..19344;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000036.1 RefSeq gene 1 348 . + . ID=gene-D5F92_RS07630;Name=D5F92_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07630;old_locus_tag=D5F92_07645;partial=true;start_range=.,1 NZ_QYTJ01000036.1 Protein Homology CDS 1 348 . + 0 ID=cds-WP_142996892.1;Parent=gene-D5F92_RS07630;Dbxref=GenBank:WP_142996892.1;Name=WP_142996892.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS07630;partial=true;product=integrase core domain-containing protein;protein_id=WP_142996892.1;start_range=.,1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 362 1129 . - . ID=gene-D5F92_RS07635;Name=D5F92_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07635;old_locus_tag=D5F92_07650 NZ_QYTJ01000036.1 Protein Homology CDS 362 1129 . - 0 ID=cds-WP_016502649.1;Parent=gene-D5F92_RS07635;Dbxref=GenBank:WP_016502649.1;Name=WP_016502649.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502649.1;locus_tag=D5F92_RS07635;product=DNA cytosine methyltransferase;protein_id=WP_016502649.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 1116 1310 . - . ID=gene-D5F92_RS07640;Name=D5F92_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07640;old_locus_tag=D5F92_07655 NZ_QYTJ01000036.1 Protein Homology CDS 1116 1310 . - 0 ID=cds-WP_041165661.1;Parent=gene-D5F92_RS07640;Dbxref=GenBank:WP_041165661.1;Name=WP_041165661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268770.1;locus_tag=D5F92_RS07640;product=hypothetical protein;protein_id=WP_041165661.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 1704 3209 . - . ID=gene-D5F92_RS07645;Name=D5F92_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07645;old_locus_tag=D5F92_07660 NZ_QYTJ01000036.1 Protein Homology CDS 1704 3209 . - 0 ID=cds-WP_124749637.1;Parent=gene-D5F92_RS07645;Dbxref=GenBank:WP_124749637.1;Name=WP_124749637.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645566.1;locus_tag=D5F92_RS07645;product=serine/threonine-protein kinase;protein_id=WP_124749637.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 3223 3996 . - . ID=gene-D5F92_RS07650;Name=D5F92_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07650;old_locus_tag=D5F92_07665 NZ_QYTJ01000036.1 Protein Homology CDS 3223 3996 . - 0 ID=cds-WP_000504421.1;Parent=gene-D5F92_RS07650;Dbxref=GenBank:WP_000504421.1;Name=WP_000504421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000504422.1;locus_tag=D5F92_RS07650;product=hypothetical protein;protein_id=WP_000504421.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 4066 5370 . - . ID=gene-D5F92_RS07655;Name=D5F92_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07655;old_locus_tag=D5F92_07670 NZ_QYTJ01000036.1 Protein Homology CDS 4066 5370 . - 0 ID=cds-WP_124749635.1;Parent=gene-D5F92_RS07655;Dbxref=GenBank:WP_124749635.1;Name=WP_124749635.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517628.1;locus_tag=D5F92_RS07655;product=recombinase family protein;protein_id=WP_124749635.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 5315 6556 . - . ID=gene-D5F92_RS07660;Name=D5F92_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07660;old_locus_tag=D5F92_07675 NZ_QYTJ01000036.1 Protein Homology CDS 5315 6556 . - 0 ID=cds-WP_124749633.1;Parent=gene-D5F92_RS07660;Dbxref=GenBank:WP_124749633.1;Name=WP_124749633.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083348.1;locus_tag=D5F92_RS07660;product=recombinase family protein;protein_id=WP_124749633.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 7094 7201 . - . ID=gene-D5F92_RS07665;Name=D5F92_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07665;old_locus_tag=D5F92_07680 NZ_QYTJ01000036.1 Protein Homology CDS 7094 7201 . - 0 ID=cds-WP_000123549.1;Parent=gene-D5F92_RS07665;Dbxref=GenBank:WP_000123549.1;Name=WP_000123549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647171.1;locus_tag=D5F92_RS07665;product=putative holin-like toxin;protein_id=WP_000123549.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 7337 8743 . - . ID=gene-D5F92_RS07670;Name=D5F92_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07670;old_locus_tag=D5F92_07685 NZ_QYTJ01000036.1 Protein Homology CDS 7337 8743 . - 0 ID=cds-WP_000143477.1;Parent=gene-D5F92_RS07670;Dbxref=GenBank:WP_000143477.1;Name=WP_000143477.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143477.1;locus_tag=D5F92_RS07670;product=glucosaminidase domain-containing protein;protein_id=WP_000143477.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 8745 9143 . - . ID=gene-D5F92_RS07675;Name=D5F92_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07675;old_locus_tag=D5F92_07690 NZ_QYTJ01000036.1 Protein Homology CDS 8745 9143 . - 0 ID=cds-WP_000661349.1;Parent=gene-D5F92_RS07675;Dbxref=GenBank:WP_000661349.1;Name=WP_000661349.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661350.1;locus_tag=D5F92_RS07675;product=phage holin family protein;protein_id=WP_000661349.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 9161 11017 . - . ID=gene-D5F92_RS07680;Name=D5F92_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07680;old_locus_tag=D5F92_07695 NZ_QYTJ01000036.1 Protein Homology CDS 9161 11017 . - 0 ID=cds-WP_124749631.1;Parent=gene-D5F92_RS07680;Dbxref=GenBank:WP_124749631.1;Name=WP_124749631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796407.1;locus_tag=D5F92_RS07680;product=DUF859 family phage minor structural protein;protein_id=WP_124749631.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 11030 13945 . - . ID=gene-D5F92_RS07685;Name=D5F92_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07685;old_locus_tag=D5F92_07700 NZ_QYTJ01000036.1 Protein Homology CDS 11030 13945 . - 0 ID=cds-WP_124749629.1;Parent=gene-D5F92_RS07685;Dbxref=GenBank:WP_124749629.1;Name=WP_124749629.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650699.1;locus_tag=D5F92_RS07685;product=phage tail spike protein;protein_id=WP_124749629.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 13945 14670 . - . ID=gene-D5F92_RS07690;Name=D5F92_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07690;old_locus_tag=D5F92_07705 NZ_QYTJ01000036.1 Protein Homology CDS 13945 14670 . - 0 ID=cds-WP_124749627.1;Parent=gene-D5F92_RS07690;Dbxref=GenBank:WP_124749627.1;Name=WP_124749627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057816.1;locus_tag=D5F92_RS07690;product=phage tail protein;protein_id=WP_124749627.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 14667 17786 . - . ID=gene-D5F92_RS07695;Name=D5F92_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07695;old_locus_tag=D5F92_07710 NZ_QYTJ01000036.1 Protein Homology CDS 14667 17786 . - 0 ID=cds-WP_124749625.1;Parent=gene-D5F92_RS07695;Dbxref=GenBank:WP_124749625.1;Name=WP_124749625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918338.1;locus_tag=D5F92_RS07695;product=phage tail tape measure protein;protein_id=WP_124749625.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq gene 18081 18500 . - . ID=gene-D5F92_RS07700;Name=D5F92_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07700;old_locus_tag=D5F92_07715 NZ_QYTJ01000036.1 Protein Homology CDS 18081 18500 . - 0 ID=cds-WP_001249617.1;Parent=gene-D5F92_RS07700;Dbxref=GenBank:WP_001249617.1;Name=WP_001249617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047255.1;locus_tag=D5F92_RS07700;product=hypothetical protein;protein_id=WP_001249617.1;transl_table=11 NZ_QYTJ01000036.1 RefSeq pseudogene 18512 18802 . - . ID=gene-D5F92_RS07705;Name=D5F92_RS07705;end_range=18802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07705;old_locus_tag=D5F92_07720;partial=true;pseudo=true NZ_QYTJ01000036.1 Protein Homology CDS 18512 18802 . - 0 ID=cds-D5F92_RS07705;Parent=gene-D5F92_RS07705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019068,GO:0005198;end_range=18802,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818561.1;locus_tag=D5F92_RS07705;partial=true;product=major tail protein;pseudo=true;transl_table=11 NZ_QYTJ01000036.1 RefSeq pseudogene 18883 19344 . + . ID=gene-D5F92_RS07715;Name=D5F92_RS07715;end_range=19344,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07715;old_locus_tag=D5F92_07730;partial=true;pseudo=true NZ_QYTJ01000036.1 Protein Homology CDS 18883 19344 . + 0 ID=cds-D5F92_RS07715;Parent=gene-D5F92_RS07715;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=19344,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS07715;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000037.1 1 29982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000037.1 RefSeq region 1 29982 . + . ID=NZ_QYTJ01000037.1:1..29982;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000037.1 RefSeq pseudogene 1 455 . - . ID=gene-D5F92_RS07720;Name=D5F92_RS07720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07720;old_locus_tag=D5F92_07735;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000037.1 Protein Homology CDS 1 455 . - 0 ID=cds-D5F92_RS07720;Parent=gene-D5F92_RS07720;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS07720;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 771 1199 . + . ID=gene-D5F92_RS07725;Name=D5F92_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07725;old_locus_tag=D5F92_07740 NZ_QYTJ01000037.1 Protein Homology CDS 771 1199 . + 0 ID=cds-WP_221620252.1;Parent=gene-D5F92_RS07725;Dbxref=GenBank:WP_221620252.1;Name=WP_221620252.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865677.1;locus_tag=D5F92_RS07725;product=FtsX-like permease family protein;protein_id=WP_221620252.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 1296 1967 . + . ID=gene-D5F92_RS07730;Name=D5F92_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07730;old_locus_tag=D5F92_07745 NZ_QYTJ01000037.1 Protein Homology CDS 1296 1967 . + 0 ID=cds-WP_016480593.1;Parent=gene-D5F92_RS07730;Dbxref=GenBank:WP_016480593.1;Name=WP_016480593.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891268.1;locus_tag=D5F92_RS07730;product=ATP-binding cassette domain-containing protein;protein_id=WP_016480593.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 2023 3468 . - . ID=gene-D5F92_RS07735;Name=D5F92_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07735;old_locus_tag=D5F92_07750 NZ_QYTJ01000037.1 Protein Homology CDS 2023 3468 . - 0 ID=cds-WP_185690647.1;Parent=gene-D5F92_RS07735;Dbxref=GenBank:WP_185690647.1;Name=WP_185690647.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646061.1;locus_tag=D5F92_RS07735;product=FAD/NAD(P)-binding protein;protein_id=WP_185690647.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 3729 4514 . + . ID=gene-D5F92_RS07740;Name=D5F92_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07740;old_locus_tag=D5F92_07755 NZ_QYTJ01000037.1 Protein Homology CDS 3729 4514 . + 0 ID=cds-WP_000825437.1;Parent=gene-D5F92_RS07740;Dbxref=GenBank:WP_000825437.1;Name=WP_000825437.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825435.1;locus_tag=D5F92_RS07740;product=DNA/RNA non-specific endonuclease;protein_id=WP_000825437.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 4592 5230 . - . ID=gene-D5F92_RS07745;Name=D5F92_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07745;old_locus_tag=D5F92_07760 NZ_QYTJ01000037.1 Protein Homology CDS 4592 5230 . - 0 ID=cds-WP_000478529.1;Parent=gene-D5F92_RS07745;Dbxref=GenBank:WP_000478529.1;Name=WP_000478529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502751.1;locus_tag=D5F92_RS07745;product=VTT domain-containing protein;protein_id=WP_000478529.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 5447 6103 . + . ID=gene-D5F92_RS07750;Name=D5F92_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07750;old_locus_tag=D5F92_07765 NZ_QYTJ01000037.1 Protein Homology CDS 5447 6103 . + 0 ID=cds-WP_016480595.1;Parent=gene-D5F92_RS07750;Dbxref=GenBank:WP_016480595.1;Name=WP_016480595.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058454.1;locus_tag=D5F92_RS07750;product=ABC transporter ATP-binding protein;protein_id=WP_016480595.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 6100 6873 . + . ID=gene-D5F92_RS07755;Name=D5F92_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07755;old_locus_tag=D5F92_07770 NZ_QYTJ01000037.1 Protein Homology CDS 6100 6873 . + 0 ID=cds-WP_000011926.1;Parent=gene-D5F92_RS07755;Dbxref=GenBank:WP_000011926.1;Name=WP_000011926.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771489.1;locus_tag=D5F92_RS07755;product=ABC transporter permease;protein_id=WP_000011926.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 7037 7855 . + . ID=gene-D5F92_RS07760;Name=D5F92_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07760;old_locus_tag=D5F92_07775 NZ_QYTJ01000037.1 Protein Homology CDS 7037 7855 . + 0 ID=cds-WP_016502752.1;Parent=gene-D5F92_RS07760;Dbxref=GenBank:WP_016502752.1;Name=WP_016502752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058456.1;locus_tag=D5F92_RS07760;product=hypothetical protein;protein_id=WP_016502752.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 7892 8776 . - . ID=gene-D5F92_RS07765;Name=D5F92_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07765;old_locus_tag=D5F92_07780 NZ_QYTJ01000037.1 Protein Homology CDS 7892 8776 . - 0 ID=cds-WP_000354839.1;Parent=gene-D5F92_RS07765;Dbxref=GenBank:WP_000354839.1;Name=WP_000354839.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354842.1;locus_tag=D5F92_RS07765;product=LysR family transcriptional regulator;protein_id=WP_000354839.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 8969 10027 . + . ID=gene-D5F92_RS07770;Name=D5F92_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07770;old_locus_tag=D5F92_07785 NZ_QYTJ01000037.1 Protein Homology CDS 8969 10027 . + 0 ID=cds-WP_001286427.1;Parent=gene-D5F92_RS07770;Dbxref=GenBank:WP_001286427.1;Name=WP_001286427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631865.1;locus_tag=D5F92_RS07770;product=PTS transporter subunit IIC;protein_id=WP_001286427.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 10041 11033 . + . ID=gene-D5F92_RS07775;Name=D5F92_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07775;old_locus_tag=D5F92_07790 NZ_QYTJ01000037.1 Protein Homology CDS 10041 11033 . + 0 ID=cds-WP_016502753.1;Parent=gene-D5F92_RS07775;Dbxref=GenBank:WP_016502753.1;Name=WP_016502753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770077.1;locus_tag=D5F92_RS07775;product=D-lactate dehydrogenase;protein_id=WP_016502753.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 11238 12788 . + . ID=gene-D5F92_RS07780;Name=D5F92_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07780;old_locus_tag=D5F92_07795 NZ_QYTJ01000037.1 Protein Homology CDS 11238 12788 . + 0 ID=cds-WP_000416100.1;Parent=gene-D5F92_RS07780;Dbxref=GenBank:WP_000416100.1;Name=WP_000416100.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416102.1;locus_tag=D5F92_RS07780;product=MFS transporter;protein_id=WP_000416100.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 12855 13880 . + . ID=gene-D5F92_RS07785;Name=D5F92_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07785;old_locus_tag=D5F92_07800 NZ_QYTJ01000037.1 Protein Homology CDS 12855 13880 . + 0 ID=cds-WP_016480598.1;Parent=gene-D5F92_RS07785;Dbxref=GenBank:WP_016480598.1;Name=WP_016480598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480598.1;locus_tag=D5F92_RS07785;product=sugar kinase;protein_id=WP_016480598.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 13897 15696 . + . ID=gene-D5F92_RS07790;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=D5F92_RS07790;old_locus_tag=D5F92_07805 NZ_QYTJ01000037.1 Protein Homology CDS 13897 15696 . + 0 ID=cds-WP_016480599.1;Parent=gene-D5F92_RS07790;Dbxref=GenBank:WP_016480599.1;Name=WP_016480599.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767467.1;locus_tag=D5F92_RS07790;product=beta-glucuronidase;protein_id=WP_016480599.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 15725 16396 . + . ID=gene-D5F92_RS07795;Name=D5F92_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07795;old_locus_tag=D5F92_07810 NZ_QYTJ01000037.1 Protein Homology CDS 15725 16396 . + 0 ID=cds-WP_000113632.1;Parent=gene-D5F92_RS07795;Dbxref=GenBank:WP_000113632.1;Name=WP_000113632.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113633.1;locus_tag=D5F92_RS07795;product=FadR/GntR family transcriptional regulator;protein_id=WP_000113632.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 16477 17130 . + . ID=gene-D5F92_RS07805;Name=D5F92_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07805;old_locus_tag=D5F92_07820 NZ_QYTJ01000037.1 Protein Homology CDS 16477 17130 . + 0 ID=cds-WP_370443800.1;Parent=gene-D5F92_RS07805;Dbxref=GenBank:WP_370443800.1;Name=WP_370443800.1;Ontology_term=GO:0008675,GO:0008700;gbkey=CDS;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089773.1;locus_tag=D5F92_RS07805;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_370443800.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 17147 18547 . + . ID=gene-D5F92_RS07810;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=D5F92_RS07810;old_locus_tag=D5F92_07825 NZ_QYTJ01000037.1 Protein Homology CDS 17147 18547 . + 0 ID=cds-WP_124749348.1;Parent=gene-D5F92_RS07810;Dbxref=GenBank:WP_124749348.1;Name=WP_124749348.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771913.1;locus_tag=D5F92_RS07810;product=glucuronate isomerase;protein_id=WP_124749348.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 18565 19611 . + . ID=gene-D5F92_RS07815;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=D5F92_RS07815;old_locus_tag=D5F92_07830 NZ_QYTJ01000037.1 Protein Homology CDS 18565 19611 . + 0 ID=cds-WP_000426044.1;Parent=gene-D5F92_RS07815;Dbxref=GenBank:WP_000426044.1;Name=WP_000426044.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426051.1;locus_tag=D5F92_RS07815;product=mannonate dehydratase;protein_id=WP_000426044.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 19735 20574 . + . ID=gene-D5F92_RS07820;Name=D5F92_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07820;old_locus_tag=D5F92_07835 NZ_QYTJ01000037.1 Protein Homology CDS 19735 20574 . + 0 ID=cds-WP_016502756.1;Parent=gene-D5F92_RS07820;Dbxref=GenBank:WP_016502756.1;Name=WP_016502756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047575.1;locus_tag=D5F92_RS07820;product=SDR family oxidoreductase;protein_id=WP_016502756.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 20727 21539 . + . ID=gene-D5F92_RS07825;Name=D5F92_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07825;old_locus_tag=D5F92_07840 NZ_QYTJ01000037.1 Protein Homology CDS 20727 21539 . + 0 ID=cds-WP_016480602.1;Parent=gene-D5F92_RS07825;Dbxref=GenBank:WP_016480602.1;Name=WP_016480602.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228641.1;locus_tag=D5F92_RS07825;product=HAD family hydrolase;protein_id=WP_016480602.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 21555 23345 . + . ID=gene-D5F92_RS07830;Name=D5F92_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07830;old_locus_tag=D5F92_07845 NZ_QYTJ01000037.1 Protein Homology CDS 21555 23345 . + 0 ID=cds-WP_016502757.1;Parent=gene-D5F92_RS07830;Dbxref=GenBank:WP_016502757.1;Name=WP_016502757.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149450.1;locus_tag=D5F92_RS07830;product=glycoside hydrolase family 3 protein;protein_id=WP_016502757.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 23403 24488 . - . ID=gene-D5F92_RS07835;Name=D5F92_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07835;old_locus_tag=D5F92_07850 NZ_QYTJ01000037.1 Protein Homology CDS 23403 24488 . - 0 ID=cds-WP_124749349.1;Parent=gene-D5F92_RS07835;Dbxref=GenBank:WP_124749349.1;Name=WP_124749349.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040814.1;locus_tag=D5F92_RS07835;product=M24 family metallopeptidase;protein_id=WP_124749349.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 24698 25702 . + . ID=gene-D5F92_RS07840;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=D5F92_RS07840;old_locus_tag=D5F92_07855 NZ_QYTJ01000037.1 Protein Homology CDS 24698 25702 . + 0 ID=cds-WP_001090621.1;Parent=gene-D5F92_RS07840;Dbxref=GenBank:WP_001090621.1;Name=WP_001090621.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058462.1;locus_tag=D5F92_RS07840;product=catabolite control protein A;protein_id=WP_001090621.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 25834 27300 . + . ID=gene-D5F92_RS07845;Name=D5F92_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07845;old_locus_tag=D5F92_07860 NZ_QYTJ01000037.1 Protein Homology CDS 25834 27300 . + 0 ID=cds-WP_124749350.1;Parent=gene-D5F92_RS07845;Dbxref=GenBank:WP_124749350.1;Name=WP_124749350.1;Ontology_term=GO:0005975,GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180581.1;locus_tag=D5F92_RS07845;product=alpha-amylase;protein_id=WP_124749350.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 27345 28343 . + . ID=gene-D5F92_RS07850;Name=D5F92_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07850;old_locus_tag=D5F92_07865 NZ_QYTJ01000037.1 Protein Homology CDS 27345 28343 . + 0 ID=cds-WP_016502760.1;Parent=gene-D5F92_RS07850;Dbxref=GenBank:WP_016502760.1;Name=WP_016502760.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502760.1;locus_tag=D5F92_RS07850;product=glycosyltransferase family 4 protein;protein_id=WP_016502760.1;transl_table=11 NZ_QYTJ01000037.1 RefSeq gene 28345 29679 . + . ID=gene-D5F92_RS07855;Name=D5F92_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07855;old_locus_tag=D5F92_07870 NZ_QYTJ01000037.1 Protein Homology CDS 28345 29679 . + 0 ID=cds-WP_016502761.1;Parent=gene-D5F92_RS07855;Dbxref=GenBank:WP_016502761.1;Name=WP_016502761.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644095.1;locus_tag=D5F92_RS07855;product=glycosyltransferase family 4 protein;protein_id=WP_016502761.1;transl_table=11 ##sequence-region NZ_QYTJ01000038.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000038.1 RefSeq region 1 650 . + . ID=NZ_QYTJ01000038.1:1..650;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000038.1 RefSeq gene 5 76 . + . ID=gene-D5F92_RS07860;Name=D5F92_RS07860;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07860;old_locus_tag=D5F92_07875 NZ_QYTJ01000038.1 tRNAscan-SE tRNA 5 76 . + . ID=rna-D5F92_RS07860;Parent=gene-D5F92_RS07860;anticodon=(pos:37..39);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07860;product=tRNA-Gly NZ_QYTJ01000038.1 tRNAscan-SE exon 5 76 . + . ID=exon-D5F92_RS07860-1;Parent=rna-D5F92_RS07860;anticodon=(pos:37..39);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07860;product=tRNA-Gly NZ_QYTJ01000038.1 RefSeq gene 85 169 . + . ID=gene-D5F92_RS07865;Name=D5F92_RS07865;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07865;old_locus_tag=D5F92_07880 NZ_QYTJ01000038.1 tRNAscan-SE tRNA 85 169 . + . ID=rna-D5F92_RS07865;Parent=gene-D5F92_RS07865;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07865;product=tRNA-Leu NZ_QYTJ01000038.1 tRNAscan-SE exon 85 169 . + . ID=exon-D5F92_RS07865-1;Parent=rna-D5F92_RS07865;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07865;product=tRNA-Leu NZ_QYTJ01000038.1 RefSeq gene 181 254 . + . ID=gene-D5F92_RS07870;Name=D5F92_RS07870;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07870;old_locus_tag=D5F92_07885 NZ_QYTJ01000038.1 tRNAscan-SE tRNA 181 254 . + . ID=rna-D5F92_RS07870;Parent=gene-D5F92_RS07870;anticodon=(pos:215..217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07870;product=tRNA-Arg NZ_QYTJ01000038.1 tRNAscan-SE exon 181 254 . + . ID=exon-D5F92_RS07870-1;Parent=rna-D5F92_RS07870;anticodon=(pos:215..217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07870;product=tRNA-Arg NZ_QYTJ01000038.1 RefSeq gene 262 335 . + . ID=gene-D5F92_RS07875;Name=D5F92_RS07875;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS07875;old_locus_tag=D5F92_07890 NZ_QYTJ01000038.1 tRNAscan-SE tRNA 262 335 . + . ID=rna-D5F92_RS07875;Parent=gene-D5F92_RS07875;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07875;product=tRNA-Pro NZ_QYTJ01000038.1 tRNAscan-SE exon 262 335 . + . ID=exon-D5F92_RS07875-1;Parent=rna-D5F92_RS07875;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS07875;product=tRNA-Pro NZ_QYTJ01000038.1 RefSeq gene 481 650 . + . ID=gene-D5F92_RS07880;Name=D5F92_RS07880;end_range=650,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS07880;old_locus_tag=D5F92_07895;partial=true NZ_QYTJ01000038.1 cmsearch rRNA 481 650 . + . ID=rna-D5F92_RS07880;Parent=gene-D5F92_RS07880;Dbxref=RFAM:RF00177;end_range=650,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS07880;partial=true;product=16S ribosomal RNA NZ_QYTJ01000038.1 cmsearch exon 481 650 . + . ID=exon-D5F92_RS07880-1;Parent=rna-D5F92_RS07880;Dbxref=RFAM:RF00177;end_range=650,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS07880;partial=true;product=16S ribosomal RNA ##sequence-region NZ_QYTJ01000039.1 1 2382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000039.1 RefSeq region 1 2382 . + . ID=NZ_QYTJ01000039.1:1..2382;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000039.1 RefSeq pseudogene 1 309 . - . ID=gene-D5F92_RS07885;Name=D5F92_RS07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07885;old_locus_tag=D5F92_07900;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000039.1 Protein Homology CDS 1 309 . - 0 ID=cds-D5F92_RS07885;Parent=gene-D5F92_RS07885;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS07885;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000039.1 RefSeq gene 540 1964 . + . ID=gene-D5F92_RS07890;Name=D5F92_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07890;old_locus_tag=D5F92_07905 NZ_QYTJ01000039.1 Protein Homology CDS 540 1964 . + 0 ID=cds-WP_124749089.1;Parent=gene-D5F92_RS07890;Dbxref=GenBank:WP_124749089.1;Name=WP_124749089.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015898628.1;locus_tag=D5F92_RS07890;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_124749089.1;transl_table=11 NZ_QYTJ01000039.1 RefSeq gene 2114 2382 . + . ID=gene-D5F92_RS07895;Name=D5F92_RS07895;end_range=2382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07895;old_locus_tag=D5F92_07910;partial=true NZ_QYTJ01000039.1 Protein Homology CDS 2114 2382 . + 0 ID=cds-WP_142996893.1;Parent=gene-D5F92_RS07895;Dbxref=GenBank:WP_142996893.1;Name=WP_142996893.1;end_range=2382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611311.1;locus_tag=D5F92_RS07895;partial=true;product=transposase;protein_id=WP_142996893.1;transl_table=11 ##sequence-region NZ_QYTJ01000004.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000004.1 RefSeq region 1 1394 . + . ID=NZ_QYTJ01000004.1:1..1394;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000004.1 RefSeq pseudogene 1 616 . + . ID=gene-D5F92_RS00915;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=pseudogene;locus_tag=D5F92_RS00915;old_locus_tag=D5F92_00920;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000004.1 Protein Homology CDS 1 616 . + 2 ID=cds-D5F92_RS00915;Parent=gene-D5F92_RS00915;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=D5F92_RS00915;partial=true;product=50S ribosomal protein L2;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000004.1 RefSeq gene 714 992 . + . ID=gene-D5F92_RS00920;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=D5F92_RS00920;old_locus_tag=D5F92_00925 NZ_QYTJ01000004.1 Protein Homology CDS 714 992 . + 0 ID=cds-WP_000533765.1-2;Parent=gene-D5F92_RS00920;Dbxref=GenBank:WP_000533765.1;Name=WP_000533765.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=D5F92_RS00920;product=30S ribosomal protein S19;protein_id=WP_000533765.1;transl_table=11 NZ_QYTJ01000004.1 RefSeq gene 1008 1352 . + . ID=gene-D5F92_RS00925;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=D5F92_RS00925;old_locus_tag=D5F92_00930 NZ_QYTJ01000004.1 Protein Homology CDS 1008 1352 . + 0 ID=cds-WP_000818141.1-2;Parent=gene-D5F92_RS00925;Dbxref=GenBank:WP_000818141.1;Name=WP_000818141.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=D5F92_RS00925;product=50S ribosomal protein L22;protein_id=WP_000818141.1;transl_table=11 ##sequence-region NZ_QYTJ01000040.1 1 18419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000040.1 RefSeq region 1 18419 . + . ID=NZ_QYTJ01000040.1:1..18419;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000040.1 RefSeq gene 390 683 . + . ID=gene-D5F92_RS07900;Name=D5F92_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07900;old_locus_tag=D5F92_07915 NZ_QYTJ01000040.1 Protein Homology CDS 390 683 . + 0 ID=cds-WP_180383428.1;Parent=gene-D5F92_RS07900;Dbxref=GenBank:WP_180383428.1;Name=WP_180383428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000245557.1;locus_tag=D5F92_RS07900;product=hypothetical protein;protein_id=WP_180383428.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 728 943 . + . ID=gene-D5F92_RS07905;Name=D5F92_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07905;old_locus_tag=D5F92_07920 NZ_QYTJ01000040.1 Protein Homology CDS 728 943 . + 0 ID=cds-WP_000522958.1;Parent=gene-D5F92_RS07905;Dbxref=GenBank:WP_000522958.1;Name=WP_000522958.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522956.1;locus_tag=D5F92_RS07905;product=helix-turn-helix transcriptional regulator;protein_id=WP_000522958.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 946 1704 . + . ID=gene-D5F92_RS07910;Name=D5F92_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07910;old_locus_tag=D5F92_07925 NZ_QYTJ01000040.1 Protein Homology CDS 946 1704 . + 0 ID=cds-WP_016502807.1;Parent=gene-D5F92_RS07910;Dbxref=GenBank:WP_016502807.1;Name=WP_016502807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480667.1;locus_tag=D5F92_RS07910;product=DUF3169 family protein;protein_id=WP_016502807.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 1789 2352 . - . ID=gene-D5F92_RS07915;Name=thiT;gbkey=Gene;gene=thiT;gene_biotype=protein_coding;locus_tag=D5F92_RS07915;old_locus_tag=D5F92_07930 NZ_QYTJ01000040.1 Protein Homology CDS 1789 2352 . - 0 ID=cds-WP_000042136.1;Parent=gene-D5F92_RS07915;Dbxref=GenBank:WP_000042136.1;Name=WP_000042136.1;Ontology_term=GO:0015888,GO:0015234;gbkey=CDS;gene=thiT;go_function=thiamine transmembrane transporter activity|0015234||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042138.1;locus_tag=D5F92_RS07915;product=energy-coupled thiamine transporter ThiT;protein_id=WP_000042136.1;transl_table=11 NZ_QYTJ01000040.1 cmsearch riboswitch 2410 2508 . - . ID=id-NZ_QYTJ01000040.1:2410..2508;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000040.1 RefSeq gene 2593 3552 . - . ID=gene-D5F92_RS07920;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D5F92_RS07920;old_locus_tag=D5F92_07935 NZ_QYTJ01000040.1 Protein Homology CDS 2593 3552 . - 0 ID=cds-WP_000214845.1;Parent=gene-D5F92_RS07920;Dbxref=GenBank:WP_000214845.1;Name=WP_000214845.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646384.1;locus_tag=D5F92_RS07920;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000214845.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 3755 5914 . - . ID=gene-D5F92_RS07925;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D5F92_RS07925;old_locus_tag=D5F92_07940 NZ_QYTJ01000040.1 Protein Homology CDS 3755 5914 . - 0 ID=cds-WP_000053862.1;Parent=gene-D5F92_RS07925;Dbxref=GenBank:WP_000053862.1;Name=WP_000053862.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053857.1;locus_tag=D5F92_RS07925;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000053862.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 5992 6216 . - . ID=gene-D5F92_RS07930;Name=D5F92_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07930;old_locus_tag=D5F92_07945 NZ_QYTJ01000040.1 Protein Homology CDS 5992 6216 . - 0 ID=cds-WP_000719060.1;Parent=gene-D5F92_RS07930;Dbxref=GenBank:WP_000719060.1;Name=WP_000719060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719060.1;locus_tag=D5F92_RS07930;product=redoxin NrdH;protein_id=WP_000719060.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 6598 6861 . + . ID=gene-D5F92_RS07935;Name=D5F92_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07935;old_locus_tag=D5F92_07950 NZ_QYTJ01000040.1 Protein Homology CDS 6598 6861 . + 0 ID=cds-WP_000146945.1;Parent=gene-D5F92_RS07935;Dbxref=GenBank:WP_000146945.1;Name=WP_000146945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=D5F92_RS07935;product=phosphocarrier protein HPr;protein_id=WP_000146945.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 6866 8599 . + . ID=gene-D5F92_RS07940;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=D5F92_RS07940;old_locus_tag=D5F92_07955 NZ_QYTJ01000040.1 Protein Homology CDS 6866 8599 . + 0 ID=cds-WP_000138153.1;Parent=gene-D5F92_RS07940;Dbxref=GenBank:WP_000138153.1;Name=WP_000138153.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294264.1;locus_tag=D5F92_RS07940;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000138153.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 8749 10176 . + . ID=gene-D5F92_RS07945;Name=D5F92_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07945;old_locus_tag=D5F92_07960 NZ_QYTJ01000040.1 Protein Homology CDS 8749 10176 . + 0 ID=cds-WP_000159916.1;Parent=gene-D5F92_RS07945;Dbxref=GenBank:WP_000159916.1;Name=WP_000159916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646385.1;locus_tag=D5F92_RS07945;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000159916.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 10315 11568 . + . ID=gene-D5F92_RS07950;Name=D5F92_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07950;old_locus_tag=D5F92_07965 NZ_QYTJ01000040.1 Protein Homology CDS 10315 11568 . + 0 ID=cds-WP_000733376.1;Parent=gene-D5F92_RS07950;Dbxref=GenBank:WP_000733376.1;Name=WP_000733376.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733367.1;locus_tag=D5F92_RS07950;product=polysaccharide deacetylase family protein;protein_id=WP_000733376.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 11599 12681 . - . ID=gene-D5F92_RS07955;Name=D5F92_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07955;old_locus_tag=D5F92_07970 NZ_QYTJ01000040.1 Protein Homology CDS 11599 12681 . - 0 ID=cds-WP_000628858.1;Parent=gene-D5F92_RS07955;Dbxref=GenBank:WP_000628858.1;Name=WP_000628858.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058504.1;locus_tag=D5F92_RS07955;product=DEAD/DEAH box helicase;protein_id=WP_000628858.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 12826 13455 . + . ID=gene-D5F92_RS07960;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=D5F92_RS07960;old_locus_tag=D5F92_07975 NZ_QYTJ01000040.1 Protein Homology CDS 12826 13455 . + 0 ID=cds-WP_001227823.1;Parent=gene-D5F92_RS07960;Dbxref=GenBank:WP_001227823.1;Name=WP_001227823.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227823.1;locus_tag=D5F92_RS07960;product=uridine kinase;protein_id=WP_001227823.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 13541 14038 . + . ID=gene-D5F92_RS07965;Name=D5F92_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07965;old_locus_tag=D5F92_07980 NZ_QYTJ01000040.1 Protein Homology CDS 13541 14038 . + 0 ID=cds-WP_016502809.1;Parent=gene-D5F92_RS07965;Dbxref=GenBank:WP_016502809.1;Name=WP_016502809.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502809.1;locus_tag=D5F92_RS07965;product=GAF domain-containing protein;protein_id=WP_016502809.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 14038 15702 . + . ID=gene-D5F92_RS07970;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=D5F92_RS07970;old_locus_tag=D5F92_07985 NZ_QYTJ01000040.1 Protein Homology CDS 14038 15702 . + 0 ID=cds-WP_016502810.1;Parent=gene-D5F92_RS07970;Dbxref=GenBank:WP_016502810.1;Name=WP_016502810.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480673.1;locus_tag=D5F92_RS07970;product=DNA polymerase III subunit gamma/tau;protein_id=WP_016502810.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 15791 15985 . + . ID=gene-D5F92_RS07975;Name=D5F92_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07975;old_locus_tag=D5F92_07990 NZ_QYTJ01000040.1 Protein Homology CDS 15791 15985 . + 0 ID=cds-WP_000166926.1;Parent=gene-D5F92_RS07975;Dbxref=GenBank:WP_000166926.1;Name=WP_000166926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631927.1;locus_tag=D5F92_RS07975;product=DUF3272 domain-containing protein;protein_id=WP_000166926.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 15966 16901 . - . ID=gene-D5F92_RS07980;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=D5F92_RS07980;old_locus_tag=D5F92_07995 NZ_QYTJ01000040.1 Protein Homology CDS 15966 16901 . - 0 ID=cds-WP_041165675.1;Parent=gene-D5F92_RS07980;Dbxref=GenBank:WP_041165675.1;Name=WP_041165675.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650903.1;locus_tag=D5F92_RS07980;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_041165675.1;transl_table=11 NZ_QYTJ01000040.1 RefSeq gene 17086 18282 . + . ID=gene-D5F92_RS07985;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=D5F92_RS07985;old_locus_tag=D5F92_08000 NZ_QYTJ01000040.1 Protein Homology CDS 17086 18282 . + 0 ID=cds-WP_000003964.1;Parent=gene-D5F92_RS07985;Dbxref=GenBank:WP_000003964.1;Name=WP_000003964.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631929.1;locus_tag=D5F92_RS07985;product=methionine adenosyltransferase;protein_id=WP_000003964.1;transl_table=11 ##sequence-region NZ_QYTJ01000041.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000041.1 RefSeq region 1 1076 . + . ID=NZ_QYTJ01000041.1:1..1076;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000041.1 RefSeq pseudogene 494 796 . - . ID=gene-D5F92_RS07990;Name=D5F92_RS07990;end_range=796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS07990;old_locus_tag=D5F92_08005;partial=true;pseudo=true NZ_QYTJ01000041.1 Protein Homology CDS 494 796 . - 0 ID=cds-D5F92_RS07990;Parent=gene-D5F92_RS07990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643540.1;locus_tag=D5F92_RS07990;partial=true;product=ISLre2 family transposase;pseudo=true;transl_table=11 NZ_QYTJ01000041.1 RefSeq gene 878 1076 . + . ID=gene-D5F92_RS07995;Name=D5F92_RS07995;end_range=1076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS07995;old_locus_tag=D5F92_08010;partial=true NZ_QYTJ01000041.1 Protein Homology CDS 878 1076 . + 0 ID=cds-WP_142996894.1;Parent=gene-D5F92_RS07995;Dbxref=GenBank:WP_142996894.1;Name=WP_142996894.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1076,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS07995;partial=true;product=transposase;protein_id=WP_142996894.1;transl_table=11 ##sequence-region NZ_QYTJ01000042.1 1 2756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000042.1 RefSeq region 1 2756 . + . ID=NZ_QYTJ01000042.1:1..2756;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000042.1 RefSeq gene 247 1401 . - . ID=gene-D5F92_RS08000;Name=D5F92_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08000;old_locus_tag=D5F92_08015 NZ_QYTJ01000042.1 Protein Homology CDS 247 1401 . - 0 ID=cds-WP_000623425.1;Parent=gene-D5F92_RS08000;Dbxref=GenBank:WP_000623425.1;Name=WP_000623425.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058800.1;locus_tag=D5F92_RS08000;product=ABC transporter permease subunit;protein_id=WP_000623425.1;transl_table=11 NZ_QYTJ01000042.1 RefSeq gene 1407 2255 . - . ID=gene-D5F92_RS08005;Name=D5F92_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08005;old_locus_tag=D5F92_08020 NZ_QYTJ01000042.1 Protein Homology CDS 1407 2255 . - 0 ID=cds-WP_016503281.1;Parent=gene-D5F92_RS08005;Dbxref=GenBank:WP_016503281.1;Name=WP_016503281.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926579.1;locus_tag=D5F92_RS08005;product=ABC transporter ATP-binding protein;protein_id=WP_016503281.1;transl_table=11 NZ_QYTJ01000042.1 RefSeq pseudogene 2392 2756 . + . ID=gene-D5F92_RS08010;Name=D5F92_RS08010;end_range=2756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08010;old_locus_tag=D5F92_08025;partial=true;pseudo=true NZ_QYTJ01000042.1 Protein Homology CDS 2392 2756 . + 0 ID=cds-D5F92_RS08010;Parent=gene-D5F92_RS08010;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2756,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS08010;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000043.1 1 90883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000043.1 RefSeq region 1 90883 . + . ID=NZ_QYTJ01000043.1:1..90883;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000043.1 RefSeq gene 89 700 . - . ID=gene-D5F92_RS08015;Name=D5F92_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08015;old_locus_tag=D5F92_08030 NZ_QYTJ01000043.1 Protein Homology CDS 89 700 . - 0 ID=cds-WP_001056394.1;Parent=gene-D5F92_RS08015;Dbxref=GenBank:WP_001056394.1;Name=WP_001056394.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056395.1;locus_tag=D5F92_RS08015;product=TVP38/TMEM64 family protein;protein_id=WP_001056394.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 793 1142 . + . ID=gene-D5F92_RS08020;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=D5F92_RS08020;old_locus_tag=D5F92_08035 NZ_QYTJ01000043.1 cmsearch tmRNA 793 1142 . + . ID=rna-D5F92_RS08020;Parent=gene-D5F92_RS08020;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS08020;product=transfer-messenger RNA NZ_QYTJ01000043.1 cmsearch exon 793 1142 . + . ID=exon-D5F92_RS08020-1;Parent=rna-D5F92_RS08020;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS08020;product=transfer-messenger RNA NZ_QYTJ01000043.1 RefSeq gene 1411 2049 . + . ID=gene-D5F92_RS08025;Name=D5F92_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08025;old_locus_tag=D5F92_08040 NZ_QYTJ01000043.1 Protein Homology CDS 1411 2049 . + 0 ID=cds-WP_086163323.1;Parent=gene-D5F92_RS08025;Dbxref=GenBank:WP_086163323.1;Name=WP_086163323.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146564.1;locus_tag=D5F92_RS08025;product=CatB-related O-acetyltransferase;protein_id=WP_086163323.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 2168 3271 . - . ID=gene-D5F92_RS08030;Name=D5F92_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08030;old_locus_tag=D5F92_08045 NZ_QYTJ01000043.1 Protein Homology CDS 2168 3271 . - 0 ID=cds-WP_016502840.1;Parent=gene-D5F92_RS08030;Dbxref=GenBank:WP_016502840.1;Name=WP_016502840.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065314.1;locus_tag=D5F92_RS08030;product=DUF2974 domain-containing protein;protein_id=WP_016502840.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 3271 6063 . - . ID=gene-D5F92_RS08035;Name=D5F92_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08035;old_locus_tag=D5F92_08050 NZ_QYTJ01000043.1 Protein Homology CDS 3271 6063 . - 0 ID=cds-WP_016502839.1;Parent=gene-D5F92_RS08035;Dbxref=GenBank:WP_016502839.1;Name=WP_016502839.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168898.1;locus_tag=D5F92_RS08035;product=cation-translocating P-type ATPase;protein_id=WP_016502839.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 6215 6649 . - . ID=gene-D5F92_RS08040;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=D5F92_RS08040;old_locus_tag=D5F92_08055 NZ_QYTJ01000043.1 Protein Homology CDS 6215 6649 . - 0 ID=cds-WP_000665410.1;Parent=gene-D5F92_RS08040;Dbxref=GenBank:WP_000665410.1;Name=WP_000665410.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665406.1;locus_tag=D5F92_RS08040;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_000665410.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 6649 7113 . - . ID=gene-D5F92_RS08045;Name=D5F92_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08045;old_locus_tag=D5F92_08060 NZ_QYTJ01000043.1 Protein Homology CDS 6649 7113 . - 0 ID=cds-WP_016480717.1;Parent=gene-D5F92_RS08045;Dbxref=GenBank:WP_016480717.1;Name=WP_016480717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621138.1;locus_tag=D5F92_RS08045;product=GNAT family N-acetyltransferase;protein_id=WP_016480717.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 7122 7781 . - . ID=gene-D5F92_RS08050;Name=D5F92_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08050;old_locus_tag=D5F92_08065 NZ_QYTJ01000043.1 Protein Homology CDS 7122 7781 . - 0 ID=cds-WP_016480716.1;Parent=gene-D5F92_RS08050;Dbxref=GenBank:WP_016480716.1;Name=WP_016480716.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001884604.1;locus_tag=D5F92_RS08050;product=HD domain-containing protein;protein_id=WP_016480716.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 7881 10514 . - . ID=gene-D5F92_RS08055;Name=D5F92_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08055;old_locus_tag=D5F92_08070 NZ_QYTJ01000043.1 Protein Homology CDS 7881 10514 . - 0 ID=cds-WP_016502838.1;Parent=gene-D5F92_RS08055;Dbxref=GenBank:WP_016502838.1;Name=WP_016502838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000678288.1;locus_tag=D5F92_RS08055;product=pneumococcal-type histidine triad protein;protein_id=WP_016502838.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 10761 12593 . - . ID=gene-D5F92_RS08060;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=D5F92_RS08060;old_locus_tag=D5F92_08075 NZ_QYTJ01000043.1 Protein Homology CDS 10761 12593 . - 0 ID=cds-WP_124749369.1;Parent=gene-D5F92_RS08060;Dbxref=GenBank:WP_124749369.1;Name=WP_124749369.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645216.1;locus_tag=D5F92_RS08060;product=translation elongation factor 4;protein_id=WP_124749369.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 12729 13145 . - . ID=gene-D5F92_RS08065;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=D5F92_RS08065;old_locus_tag=D5F92_08080 NZ_QYTJ01000043.1 Protein Homology CDS 12729 13145 . - 0 ID=cds-WP_000438313.1;Parent=gene-D5F92_RS08065;Dbxref=GenBank:WP_000438313.1;Name=WP_000438313.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480713.1;locus_tag=D5F92_RS08065;product=nucleoside-diphosphate kinase;protein_id=WP_000438313.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq pseudogene 13456 13715 . - . ID=gene-D5F92_RS11570;Name=D5F92_RS11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11570;pseudo=true NZ_QYTJ01000043.1 Protein Homology CDS 13456 13715 . - 0 ID=cds-D5F92_RS11570;Parent=gene-D5F92_RS11570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900526.1;locus_tag=D5F92_RS11570;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000043.1 RefSeq direct_repeat 13768 14595 . + . ID=id-NZ_QYTJ01000043.1:13768..14595;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=13768..13803;rpt_unit_seq=gttttggaaccattcgaaacagcacagctctaaaac NZ_QYTJ01000043.1 RefSeq gene 14696 15361 . - . ID=gene-D5F92_RS08075;Name=csn2;gbkey=Gene;gene=csn2;gene_biotype=protein_coding;locus_tag=D5F92_RS08075;old_locus_tag=D5F92_08090 NZ_QYTJ01000043.1 Protein Homology CDS 14696 15361 . - 0 ID=cds-WP_000590706.1;Parent=gene-D5F92_RS08075;Dbxref=GenBank:WP_000590706.1;Name=WP_000590706.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csn2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480712.1;locus_tag=D5F92_RS08075;product=type II-A CRISPR-associated protein Csn2;protein_id=WP_000590706.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 15348 15689 . - . ID=gene-D5F92_RS08080;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=D5F92_RS08080;old_locus_tag=D5F92_08095 NZ_QYTJ01000043.1 Protein Homology CDS 15348 15689 . - 0 ID=cds-WP_016502835.1;Parent=gene-D5F92_RS08080;Dbxref=GenBank:WP_016502835.1;Name=WP_016502835.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502835.1;locus_tag=D5F92_RS08080;product=CRISPR-associated endonuclease Cas2;protein_id=WP_016502835.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 15686 16555 . - . ID=gene-D5F92_RS08085;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=D5F92_RS08085;old_locus_tag=D5F92_08100 NZ_QYTJ01000043.1 Protein Homology CDS 15686 16555 . - 0 ID=cds-WP_016502834.1;Parent=gene-D5F92_RS08085;Dbxref=GenBank:WP_016502834.1;Name=WP_016502834.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502834.1;locus_tag=D5F92_RS08085;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_016502834.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 16557 20669 . - . ID=gene-D5F92_RS08090;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=D5F92_RS08090;old_locus_tag=D5F92_08105 NZ_QYTJ01000043.1 Protein Homology CDS 16557 20669 . - 0 ID=cds-WP_016502833.1;Parent=gene-D5F92_RS08090;Dbxref=GenBank:WP_016502833.1;Name=WP_016502833.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01865.2;locus_tag=D5F92_RS08090;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_016502833.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 20949 21605 . - . ID=gene-D5F92_RS08095;Name=D5F92_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08095;old_locus_tag=D5F92_08110 NZ_QYTJ01000043.1 Protein Homology CDS 20949 21605 . - 0 ID=cds-WP_086163319.1;Parent=gene-D5F92_RS08095;Dbxref=GenBank:WP_086163319.1;Name=WP_086163319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480709.1;locus_tag=D5F92_RS08095;product=TIGR01906 family membrane protein;protein_id=WP_086163319.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 21595 22365 . - . ID=gene-D5F92_RS08100;Name=D5F92_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08100;old_locus_tag=D5F92_08115 NZ_QYTJ01000043.1 Protein Homology CDS 21595 22365 . - 0 ID=cds-WP_000323544.1;Parent=gene-D5F92_RS08100;Dbxref=GenBank:WP_000323544.1;Name=WP_000323544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323542.1;locus_tag=D5F92_RS08100;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_000323544.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 22366 23103 . - . ID=gene-D5F92_RS08105;Name=D5F92_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08105;old_locus_tag=D5F92_08120 NZ_QYTJ01000043.1 Protein Homology CDS 22366 23103 . - 0 ID=cds-WP_016502831.1;Parent=gene-D5F92_RS08105;Dbxref=GenBank:WP_016502831.1;Name=WP_016502831.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631960.1;locus_tag=D5F92_RS08105;product=acyl-ACP thioesterase domain-containing protein;protein_id=WP_016502831.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 23107 24237 . - . ID=gene-D5F92_RS08110;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=D5F92_RS08110;old_locus_tag=D5F92_08125 NZ_QYTJ01000043.1 Protein Homology CDS 23107 24237 . - 0 ID=cds-WP_086163318.1;Parent=gene-D5F92_RS08110;Dbxref=GenBank:WP_086163318.1;Name=WP_086163318.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058522.1;locus_tag=D5F92_RS08110;product=radical SAM family heme chaperone HemW;protein_id=WP_086163318.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 24331 24711 . - . ID=gene-D5F92_RS08115;Name=D5F92_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08115;old_locus_tag=D5F92_08130 NZ_QYTJ01000043.1 Protein Homology CDS 24331 24711 . - 0 ID=cds-WP_001241816.1;Parent=gene-D5F92_RS08115;Dbxref=GenBank:WP_001241816.1;Name=WP_001241816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480707.1;locus_tag=D5F92_RS08115;product=TIGR02328 family protein;protein_id=WP_001241816.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 24736 25107 . - . ID=gene-D5F92_RS08120;Name=D5F92_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08120;old_locus_tag=D5F92_08135 NZ_QYTJ01000043.1 Protein Homology CDS 24736 25107 . - 0 ID=cds-WP_000159234.1;Parent=gene-D5F92_RS08120;Dbxref=GenBank:WP_000159234.1;Name=WP_000159234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159232.1;locus_tag=D5F92_RS08120;product=YbgA family protein;protein_id=WP_000159234.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 25230 26582 . - . ID=gene-D5F92_RS08125;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=D5F92_RS08125;old_locus_tag=D5F92_08140 NZ_QYTJ01000043.1 Protein Homology CDS 25230 26582 . - 0 ID=cds-WP_000521427.1;Parent=gene-D5F92_RS08125;Dbxref=GenBank:WP_000521427.1;Name=WP_000521427.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738537.1;locus_tag=D5F92_RS08125;product=phosphoglucosamine mutase;protein_id=WP_000521427.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 26636 27595 . - . ID=gene-D5F92_RS08130;Name=D5F92_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08130;old_locus_tag=D5F92_08145 NZ_QYTJ01000043.1 Protein Homology CDS 26636 27595 . - 0 ID=cds-WP_000713236.1;Parent=gene-D5F92_RS08130;Dbxref=GenBank:WP_000713236.1;Name=WP_000713236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770882.1;locus_tag=D5F92_RS08130;product=CdaR family protein;protein_id=WP_000713236.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 27598 28449 . - . ID=gene-D5F92_RS08135;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=D5F92_RS08135;old_locus_tag=D5F92_08150 NZ_QYTJ01000043.1 Protein Homology CDS 27598 28449 . - 0 ID=cds-WP_000350949.1;Parent=gene-D5F92_RS08135;Dbxref=GenBank:WP_000350949.1;Name=WP_000350949.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646387.1;locus_tag=D5F92_RS08135;product=diadenylate cyclase CdaA;protein_id=WP_000350949.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 28589 29932 . + . ID=gene-D5F92_RS08140;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=D5F92_RS08140;old_locus_tag=D5F92_08155 NZ_QYTJ01000043.1 Protein Homology CDS 28589 29932 . + 0 ID=cds-WP_124749367.1;Parent=gene-D5F92_RS08140;Dbxref=GenBank:WP_124749367.1;Name=WP_124749367.1;Ontology_term=GO:0009252,GO:0016881,GO:0140282;gbkey=CDS;gene=murT;go_function=acid-amino acid ligase activity|0016881||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700881.1;locus_tag=D5F92_RS08140;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_124749367.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 29932 30717 . + . ID=gene-D5F92_RS08145;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=D5F92_RS08145;old_locus_tag=D5F92_08160 NZ_QYTJ01000043.1 Protein Homology CDS 29932 30717 . + 0 ID=cds-WP_016502828.1;Parent=gene-D5F92_RS08145;Dbxref=GenBank:WP_016502828.1;Name=WP_016502828.1;Ontology_term=GO:0009252,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222744.1;locus_tag=D5F92_RS08145;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_016502828.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 30825 31814 . - . ID=gene-D5F92_RS08150;Name=D5F92_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08150;old_locus_tag=D5F92_08165 NZ_QYTJ01000043.1 Protein Homology CDS 30825 31814 . - 0 ID=cds-WP_016502827.1;Parent=gene-D5F92_RS08150;Dbxref=GenBank:WP_016502827.1;Name=WP_016502827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875297.1;locus_tag=D5F92_RS08150;product=lipoate--protein ligase;protein_id=WP_016502827.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 31912 33669 . - . ID=gene-D5F92_RS08155;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=D5F92_RS08155;old_locus_tag=D5F92_08170 NZ_QYTJ01000043.1 Protein Homology CDS 31912 33669 . - 0 ID=cds-WP_124749365.1;Parent=gene-D5F92_RS08155;Dbxref=GenBank:WP_124749365.1;Name=WP_124749365.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863364.1;locus_tag=D5F92_RS08155;product=dihydrolipoyl dehydrogenase;protein_id=WP_124749365.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 33729 35117 . - . ID=gene-D5F92_RS08160;Name=D5F92_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08160;old_locus_tag=D5F92_08175 NZ_QYTJ01000043.1 Protein Homology CDS 33729 35117 . - 0 ID=cds-WP_000257565.1;Parent=gene-D5F92_RS08160;Dbxref=GenBank:WP_000257565.1;Name=WP_000257565.1;Ontology_term=GO:0006086,GO:0016746,GO:0045254;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257567.1;locus_tag=D5F92_RS08160;product=dihydrolipoamide acetyltransferase;protein_id=WP_000257565.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 35244 36242 . - . ID=gene-D5F92_RS08165;Name=D5F92_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08165;old_locus_tag=D5F92_08180 NZ_QYTJ01000043.1 Protein Homology CDS 35244 36242 . - 0 ID=cds-WP_000005088.1;Parent=gene-D5F92_RS08165;Dbxref=GenBank:WP_000005088.1;Name=WP_000005088.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005088.1;locus_tag=D5F92_RS08165;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_000005088.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 36317 37285 . - . ID=gene-D5F92_RS08170;Name=D5F92_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08170;old_locus_tag=D5F92_08185 NZ_QYTJ01000043.1 Protein Homology CDS 36317 37285 . - 0 ID=cds-WP_000258166.1;Parent=gene-D5F92_RS08170;Dbxref=GenBank:WP_000258166.1;Name=WP_000258166.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258167.1;locus_tag=D5F92_RS08170;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_000258166.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 37435 39345 . - . ID=gene-D5F92_RS08175;Name=D5F92_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08175;old_locus_tag=D5F92_08190 NZ_QYTJ01000043.1 Protein Homology CDS 37435 39345 . - 0 ID=cds-WP_017647152.1;Parent=gene-D5F92_RS08175;Dbxref=GenBank:WP_017647152.1;Name=WP_017647152.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647152.1;locus_tag=D5F92_RS08175;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_017647152.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 39473 40849 . + . ID=gene-D5F92_RS08180;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=D5F92_RS08180;old_locus_tag=D5F92_08195 NZ_QYTJ01000043.1 Protein Homology CDS 39473 40849 . + 0 ID=cds-WP_000028886.1;Parent=gene-D5F92_RS08180;Dbxref=GenBank:WP_000028886.1;Name=WP_000028886.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028905.1;locus_tag=D5F92_RS08180;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000028886.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 40881 41798 . - . ID=gene-D5F92_RS08185;Name=D5F92_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08185;old_locus_tag=D5F92_08200 NZ_QYTJ01000043.1 Protein Homology CDS 40881 41798 . - 0 ID=cds-WP_000634649.1;Parent=gene-D5F92_RS08185;Dbxref=GenBank:WP_000634649.1;Name=WP_000634649.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634642.1;locus_tag=D5F92_RS08185;product=magnesium transporter CorA family protein;protein_id=WP_000634649.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 41811 45434 . - . ID=gene-D5F92_RS08190;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=D5F92_RS08190;old_locus_tag=D5F92_08205 NZ_QYTJ01000043.1 Protein Homology CDS 41811 45434 . - 0 ID=cds-WP_016502824.1;Parent=gene-D5F92_RS08190;Dbxref=GenBank:WP_016502824.1;Name=WP_016502824.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143231.1;locus_tag=D5F92_RS08190;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_016502824.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 45424 48657 . - . ID=gene-D5F92_RS08195;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=D5F92_RS08195;old_locus_tag=D5F92_08210 NZ_QYTJ01000043.1 Protein Homology CDS 45424 48657 . - 0 ID=cds-WP_086163313.1;Parent=gene-D5F92_RS08195;Dbxref=GenBank:WP_086163313.1;Name=WP_086163313.1;Ontology_term=GO:0000724,GO:0004518;gbkey=CDS;gene=rexB;go_function=nuclease activity|0004518||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767794.1;locus_tag=D5F92_RS08195;product=ATP-dependent nuclease subunit B;protein_id=WP_086163313.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 48835 49737 . + . ID=gene-D5F92_RS08200;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=D5F92_RS08200;old_locus_tag=D5F92_08215 NZ_QYTJ01000043.1 Protein Homology CDS 48835 49737 . + 0 ID=cds-WP_016502822.1;Parent=gene-D5F92_RS08200;Dbxref=GenBank:WP_016502822.1;Name=WP_016502822.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650877.1;locus_tag=D5F92_RS08200;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_016502822.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 49809 52214 . - . ID=gene-D5F92_RS08205;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=D5F92_RS08205;old_locus_tag=D5F92_08220 NZ_QYTJ01000043.1 Protein Homology CDS 49809 52214 . - 0 ID=cds-WP_016480696.1;Parent=gene-D5F92_RS08205;Dbxref=GenBank:WP_016480696.1;Name=WP_016480696.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961574.1;locus_tag=D5F92_RS08205;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_016480696.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 52267 52788 . - . ID=gene-D5F92_RS08210;Name=D5F92_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08210;old_locus_tag=D5F92_08225 NZ_QYTJ01000043.1 Protein Homology CDS 52267 52788 . - 0 ID=cds-WP_000078401.1;Parent=gene-D5F92_RS08210;Dbxref=GenBank:WP_000078401.1;Name=WP_000078401.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078399.1;locus_tag=D5F92_RS08210;product=GNAT family N-acetyltransferase;protein_id=WP_000078401.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 52871 53911 . - . ID=gene-D5F92_RS08215;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=D5F92_RS08215;old_locus_tag=D5F92_08230 NZ_QYTJ01000043.1 Protein Homology CDS 52871 53911 . - 0 ID=cds-WP_000365655.1;Parent=gene-D5F92_RS08215;Dbxref=GenBank:WP_000365655.1;Name=WP_000365655.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365656.1;locus_tag=D5F92_RS08215;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000365655.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 54202 55059 . - . ID=gene-D5F92_RS08220;Name=D5F92_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08220;old_locus_tag=D5F92_08235 NZ_QYTJ01000043.1 Protein Homology CDS 54202 55059 . - 0 ID=cds-WP_124785507.1;Parent=gene-D5F92_RS08220;Dbxref=GenBank:WP_124785507.1;Name=WP_124785507.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162649.1;locus_tag=D5F92_RS08220;product=DNA/RNA non-specific endonuclease;protein_id=WP_124785507.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 55134 55325 . - . ID=gene-D5F92_RS08225;Name=D5F92_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08225;old_locus_tag=D5F92_08240 NZ_QYTJ01000043.1 Protein Homology CDS 55134 55325 . - 0 ID=cds-WP_000168511.1;Parent=gene-D5F92_RS08225;Dbxref=GenBank:WP_000168511.1;Name=WP_000168511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168511.1;locus_tag=D5F92_RS08225;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000168511.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 55327 56598 . - . ID=gene-D5F92_RS08230;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=D5F92_RS08230;old_locus_tag=D5F92_08245 NZ_QYTJ01000043.1 Protein Homology CDS 55327 56598 . - 0 ID=cds-WP_000357877.1;Parent=gene-D5F92_RS08230;Dbxref=GenBank:WP_000357877.1;Name=WP_000357877.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357880.1;locus_tag=D5F92_RS08230;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357877.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 56661 56891 . - . ID=gene-D5F92_RS08235;Name=D5F92_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08235;old_locus_tag=D5F92_08250 NZ_QYTJ01000043.1 Protein Homology CDS 56661 56891 . - 0 ID=cds-WP_000602601.1;Parent=gene-D5F92_RS08235;Dbxref=GenBank:WP_000602601.1;Name=WP_000602601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602601.1;locus_tag=D5F92_RS08235;product=DUF1146 family protein;protein_id=WP_000602601.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 56956 57369 . - . ID=gene-D5F92_RS08240;Name=D5F92_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08240;old_locus_tag=D5F92_08255 NZ_QYTJ01000043.1 Protein Homology CDS 56956 57369 . - 0 ID=cds-WP_000068053.1;Parent=gene-D5F92_RS08240;Dbxref=GenBank:WP_000068053.1;Name=WP_000068053.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068055.1;locus_tag=D5F92_RS08240;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_000068053.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 57382 58788 . - . ID=gene-D5F92_RS08245;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=D5F92_RS08245;old_locus_tag=D5F92_08260 NZ_QYTJ01000043.1 Protein Homology CDS 57382 58788 . - 0 ID=cds-WP_124785509.1;Parent=gene-D5F92_RS08245;Dbxref=GenBank:WP_124785509.1;Name=WP_124785509.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643977.1;locus_tag=D5F92_RS08245;product=F0F1 ATP synthase subunit beta;protein_id=WP_124785509.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 58862 59743 . - . ID=gene-D5F92_RS08250;Name=D5F92_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08250;old_locus_tag=D5F92_08265 NZ_QYTJ01000043.1 Protein Homology CDS 58862 59743 . - 0 ID=cds-WP_000919083.1;Parent=gene-D5F92_RS08250;Dbxref=GenBank:WP_000919083.1;Name=WP_000919083.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919083.1;locus_tag=D5F92_RS08250;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000919083.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 59759 61264 . - . ID=gene-D5F92_RS08255;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=D5F92_RS08255;old_locus_tag=D5F92_08270 NZ_QYTJ01000043.1 Protein Homology CDS 59759 61264 . - 0 ID=cds-WP_000996613.1;Parent=gene-D5F92_RS08255;Dbxref=GenBank:WP_000996613.1;Name=WP_000996613.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889023.1;locus_tag=D5F92_RS08255;product=F0F1 ATP synthase subunit alpha;protein_id=WP_000996613.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 61280 61816 . - . ID=gene-D5F92_RS08260;Name=D5F92_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08260;old_locus_tag=D5F92_08275 NZ_QYTJ01000043.1 Protein Homology CDS 61280 61816 . - 0 ID=cds-WP_001036757.1;Parent=gene-D5F92_RS08260;Dbxref=GenBank:WP_001036757.1;Name=WP_001036757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036758.1;locus_tag=D5F92_RS08260;product=F0F1 ATP synthase subunit delta;protein_id=WP_001036757.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 61816 62313 . - . ID=gene-D5F92_RS08265;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=D5F92_RS08265;old_locus_tag=D5F92_08280 NZ_QYTJ01000043.1 Protein Homology CDS 61816 62313 . - 0 ID=cds-WP_000025478.1;Parent=gene-D5F92_RS08265;Dbxref=GenBank:WP_000025478.1;Name=WP_000025478.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025481.1;locus_tag=D5F92_RS08265;product=F0F1 ATP synthase subunit B;protein_id=WP_000025478.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 62331 63047 . - . ID=gene-D5F92_RS08270;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=D5F92_RS08270;old_locus_tag=D5F92_08285 NZ_QYTJ01000043.1 Protein Homology CDS 62331 63047 . - 0 ID=cds-WP_000446421.1;Parent=gene-D5F92_RS08270;Dbxref=GenBank:WP_000446421.1;Name=WP_000446421.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000446422.1;locus_tag=D5F92_RS08270;product=F0F1 ATP synthase subunit A;protein_id=WP_000446421.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 63079 63279 . - . ID=gene-D5F92_RS08275;Name=D5F92_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08275;old_locus_tag=D5F92_08290 NZ_QYTJ01000043.1 Protein Homology CDS 63079 63279 . - 0 ID=cds-WP_001046538.1;Parent=gene-D5F92_RS08275;Dbxref=GenBank:WP_001046538.1;Name=WP_001046538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046538.1;locus_tag=D5F92_RS08275;product=F0F1 ATP synthase subunit C;protein_id=WP_001046538.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 63611 65041 . - . ID=gene-D5F92_RS08280;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=D5F92_RS08280;old_locus_tag=D5F92_08295 NZ_QYTJ01000043.1 Protein Homology CDS 63611 65041 . - 0 ID=cds-WP_000699868.1;Parent=gene-D5F92_RS08280;Dbxref=GenBank:WP_000699868.1;Name=WP_000699868.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480692.1;locus_tag=D5F92_RS08280;product=glycogen synthase GlgA;protein_id=WP_000699868.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 65038 66171 . - . ID=gene-D5F92_RS08285;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=D5F92_RS08285;old_locus_tag=D5F92_08300 NZ_QYTJ01000043.1 Protein Homology CDS 65038 66171 . - 0 ID=cds-WP_016502820.1;Parent=gene-D5F92_RS08285;Dbxref=GenBank:WP_016502820.1;Name=WP_016502820.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgD;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687083.1;locus_tag=D5F92_RS08285;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=WP_016502820.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 66161 67300 . - . ID=gene-D5F92_RS08290;Name=D5F92_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08290;old_locus_tag=D5F92_08305 NZ_QYTJ01000043.1 Protein Homology CDS 66161 67300 . - 0 ID=cds-WP_000787289.1;Parent=gene-D5F92_RS08290;Dbxref=GenBank:WP_000787289.1;Name=WP_000787289.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019785022.1;locus_tag=D5F92_RS08290;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000787289.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 67342 69210 . - . ID=gene-D5F92_RS08295;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=D5F92_RS08295;old_locus_tag=D5F92_08310 NZ_QYTJ01000043.1 Protein Homology CDS 67342 69210 . - 0 ID=cds-WP_016502819.1;Parent=gene-D5F92_RS08295;Dbxref=GenBank:WP_016502819.1;Name=WP_016502819.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631939.1;locus_tag=D5F92_RS08295;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_016502819.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 69416 71716 . - . ID=gene-D5F92_RS08300;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=D5F92_RS08300;old_locus_tag=D5F92_08315 NZ_QYTJ01000043.1 Protein Homology CDS 69416 71716 . - 0 ID=cds-WP_124785511.1;Parent=gene-D5F92_RS08300;Dbxref=GenBank:WP_124785511.1;Name=WP_124785511.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370733.1;locus_tag=D5F92_RS08300;product=type I pullulanase;protein_id=WP_124785511.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 71720 72739 . - . ID=gene-D5F92_RS08305;Name=D5F92_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08305;old_locus_tag=D5F92_08320 NZ_QYTJ01000043.1 Protein Homology CDS 71720 72739 . - 0 ID=cds-WP_000744288.1;Parent=gene-D5F92_RS08305;Dbxref=GenBank:WP_000744288.1;Name=WP_000744288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744285.1;locus_tag=D5F92_RS08305;product=diacylglycerol kinase family lipid kinase;protein_id=WP_000744288.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 72751 74709 . - . ID=gene-D5F92_RS08310;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=D5F92_RS08310;old_locus_tag=D5F92_08325 NZ_QYTJ01000043.1 Protein Homology CDS 72751 74709 . - 0 ID=cds-WP_001883531.1;Parent=gene-D5F92_RS08310;Dbxref=GenBank:WP_001883531.1;Name=WP_001883531.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873525.1;locus_tag=D5F92_RS08310;product=NAD-dependent DNA ligase LigA;protein_id=WP_001883531.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 74849 75358 . - . ID=gene-D5F92_RS08315;Name=D5F92_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08315;old_locus_tag=D5F92_08330 NZ_QYTJ01000043.1 Protein Homology CDS 74849 75358 . - 0 ID=cds-WP_001091613.1;Parent=gene-D5F92_RS08315;Dbxref=GenBank:WP_001091613.1;Name=WP_001091613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631935.1;locus_tag=D5F92_RS08315;product=QueT transporter family protein;protein_id=WP_001091613.1;transl_table=11 NZ_QYTJ01000043.1 cmsearch riboswitch 75356 75469 . - . ID=id-NZ_QYTJ01000043.1:75356..75469;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000043.1 RefSeq gene 75540 75995 . + . ID=gene-D5F92_RS08320;Name=D5F92_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08320;old_locus_tag=D5F92_08335 NZ_QYTJ01000043.1 Protein Homology CDS 75540 75995 . + 0 ID=cds-WP_016502818.1;Parent=gene-D5F92_RS08320;Dbxref=GenBank:WP_016502818.1;Name=WP_016502818.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239844.1;locus_tag=D5F92_RS08320;product=GtrA family protein;protein_id=WP_016502818.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 76012 76932 . - . ID=gene-D5F92_RS08325;Name=D5F92_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08325;old_locus_tag=D5F92_08340 NZ_QYTJ01000043.1 Protein Homology CDS 76012 76932 . - 0 ID=cds-WP_000768440.1;Parent=gene-D5F92_RS08325;Dbxref=GenBank:WP_000768440.1;Name=WP_000768440.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767751.1;locus_tag=D5F92_RS08325;product=YihY/virulence factor BrkB family protein;protein_id=WP_000768440.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 76934 77794 . - . ID=gene-D5F92_RS08330;Name=D5F92_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08330;old_locus_tag=D5F92_08345 NZ_QYTJ01000043.1 Protein Homology CDS 76934 77794 . - 0 ID=cds-WP_016502817.1;Parent=gene-D5F92_RS08330;Dbxref=GenBank:WP_016502817.1;Name=WP_016502817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903404.1;locus_tag=D5F92_RS08330;product=methionyl aminopeptidase;protein_id=WP_016502817.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 77817 79100 . - . ID=gene-D5F92_RS08335;Name=spxR;gbkey=Gene;gene=spxR;gene_biotype=protein_coding;locus_tag=D5F92_RS08335;old_locus_tag=D5F92_08350 NZ_QYTJ01000043.1 Protein Homology CDS 77817 79100 . - 0 ID=cds-WP_000033796.1;Parent=gene-D5F92_RS08335;Dbxref=GenBank:WP_000033796.1;Name=WP_000033796.1;gbkey=CDS;gene=spxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033790.1;locus_tag=D5F92_RS08335;product=CBS-HotDog domain-containing transcription factor SpxR;protein_id=WP_000033796.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 79093 79647 . - . ID=gene-D5F92_RS08340;Name=D5F92_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08340;old_locus_tag=D5F92_08355 NZ_QYTJ01000043.1 Protein Homology CDS 79093 79647 . - 0 ID=cds-WP_000355951.1;Parent=gene-D5F92_RS08340;Dbxref=GenBank:WP_000355951.1;Name=WP_000355951.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355949.1;locus_tag=D5F92_RS08340;product=GNAT family N-acetyltransferase;protein_id=WP_000355951.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 79749 81008 . - . ID=gene-D5F92_RS08345;Name=D5F92_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08345;old_locus_tag=D5F92_08360 NZ_QYTJ01000043.1 Protein Homology CDS 79749 81008 . - 0 ID=cds-WP_124785513.1;Parent=gene-D5F92_RS08345;Dbxref=GenBank:WP_124785513.1;Name=WP_124785513.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226236.1;locus_tag=D5F92_RS08345;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_124785513.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 81135 81806 . - . ID=gene-D5F92_RS08350;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=D5F92_RS08350;old_locus_tag=D5F92_08365 NZ_QYTJ01000043.1 Protein Homology CDS 81135 81806 . - 0 ID=cds-WP_016502815.1;Parent=gene-D5F92_RS08350;Dbxref=GenBank:WP_016502815.1;Name=WP_016502815.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001904425.1;locus_tag=D5F92_RS08350;product=thiamine phosphate synthase;protein_id=WP_016502815.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 81820 82590 . - . ID=gene-D5F92_RS08355;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=D5F92_RS08355;old_locus_tag=D5F92_08370 NZ_QYTJ01000043.1 Protein Homology CDS 81820 82590 . - 0 ID=cds-WP_016502814.1;Parent=gene-D5F92_RS08355;Dbxref=GenBank:WP_016502814.1;Name=WP_016502814.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502814.1;locus_tag=D5F92_RS08355;product=hydroxyethylthiazole kinase;protein_id=WP_016502814.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 82592 83389 . - . ID=gene-D5F92_RS08360;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=D5F92_RS08360;old_locus_tag=D5F92_08375 NZ_QYTJ01000043.1 Protein Homology CDS 82592 83389 . - 0 ID=cds-WP_000221577.1;Parent=gene-D5F92_RS08360;Dbxref=GenBank:WP_000221577.1;Name=WP_000221577.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221574.1;locus_tag=D5F92_RS08360;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000221577.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 83391 84071 . - . ID=gene-D5F92_RS08365;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=D5F92_RS08365;old_locus_tag=D5F92_08380 NZ_QYTJ01000043.1 Protein Homology CDS 83391 84071 . - 0 ID=cds-WP_016502813.1;Parent=gene-D5F92_RS08365;Dbxref=GenBank:WP_016502813.1;Name=WP_016502813.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502813.1;locus_tag=D5F92_RS08365;product=thiaminase II;protein_id=WP_016502813.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 84155 84823 . - . ID=gene-D5F92_RS08370;Name=D5F92_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08370;old_locus_tag=D5F92_08385 NZ_QYTJ01000043.1 Protein Homology CDS 84155 84823 . - 0 ID=cds-WP_000482627.1;Parent=gene-D5F92_RS08370;Dbxref=GenBank:WP_000482627.1;Name=WP_000482627.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480683.1;locus_tag=D5F92_RS08370;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_000482627.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 84811 86097 . - . ID=gene-D5F92_RS08375;Name=D5F92_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08375;old_locus_tag=D5F92_08390 NZ_QYTJ01000043.1 Protein Homology CDS 84811 86097 . - 0 ID=cds-WP_000953604.1;Parent=gene-D5F92_RS08375;Dbxref=GenBank:WP_000953604.1;Name=WP_000953604.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953609.1;locus_tag=D5F92_RS08375;product=ATP-binding cassette domain-containing protein;protein_id=WP_000953604.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 86101 86655 . - . ID=gene-D5F92_RS08380;Name=D5F92_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08380;old_locus_tag=D5F92_08395 NZ_QYTJ01000043.1 Protein Homology CDS 86101 86655 . - 0 ID=cds-WP_000766004.1;Parent=gene-D5F92_RS08380;Dbxref=GenBank:WP_000766004.1;Name=WP_000766004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649536.1;locus_tag=D5F92_RS08380;product=ECF transporter S component;protein_id=WP_000766004.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 86652 87218 . - . ID=gene-D5F92_RS08385;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=D5F92_RS08385;old_locus_tag=D5F92_08400 NZ_QYTJ01000043.1 Protein Homology CDS 86652 87218 . - 0 ID=cds-WP_000181409.1;Parent=gene-D5F92_RS08385;Dbxref=GenBank:WP_000181409.1;Name=WP_000181409.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181415.1;locus_tag=D5F92_RS08385;product=energy coupling factor transporter S component ThiW;protein_id=WP_000181409.1;transl_table=11 NZ_QYTJ01000043.1 cmsearch riboswitch 87374 87463 . - . ID=id-NZ_QYTJ01000043.1:87374..87463;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000043.1 RefSeq gene 87614 88159 . - . ID=gene-D5F92_RS08390;Name=D5F92_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08390;old_locus_tag=D5F92_08405 NZ_QYTJ01000043.1 Protein Homology CDS 87614 88159 . - 0 ID=cds-WP_016502812.1;Parent=gene-D5F92_RS08390;Dbxref=GenBank:WP_016502812.1;Name=WP_016502812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724544.1;locus_tag=D5F92_RS08390;product=GA module-containing protein;protein_id=WP_016502812.1;transl_table=11 NZ_QYTJ01000043.1 RefSeq gene 88226 90649 . - . ID=gene-D5F92_RS11485;Name=D5F92_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11485;old_locus_tag=D5F92_08410 NZ_QYTJ01000043.1 Protein Homology CDS 88226 90649 . - 0 ID=cds-WP_016502811.1;Parent=gene-D5F92_RS11485;Dbxref=GenBank:WP_016502811.1;Name=WP_016502811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.6;locus_tag=D5F92_RS11485;product=coagulase domain-containing protein;protein_id=WP_016502811.1;transl_table=11 ##sequence-region NZ_QYTJ01000044.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000044.1 RefSeq region 1 1571 . + . ID=NZ_QYTJ01000044.1:1..1571;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000044.1 RefSeq pseudogene 1 228 . - . ID=gene-D5F92_RS08400;Name=D5F92_RS08400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08400;old_locus_tag=D5F92_08415;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000044.1 Protein Homology CDS 1 228 . - 0 ID=cds-D5F92_RS08400;Parent=gene-D5F92_RS08400;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F92_RS08400;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000044.1 RefSeq pseudogene 1068 1571 . + . ID=gene-D5F92_RS08415;Name=D5F92_RS08415;end_range=1571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08415;old_locus_tag=D5F92_08430;partial=true;pseudo=true NZ_QYTJ01000044.1 Protein Homology CDS 1068 1571 . + 0 ID=cds-D5F92_RS08415;Parent=gene-D5F92_RS08415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285452.1;locus_tag=D5F92_RS08415;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000045.1 1 65295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000045.1 RefSeq region 1 65295 . + . ID=NZ_QYTJ01000045.1:1..65295;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000045.1 RefSeq gene 272 958 . + . ID=gene-D5F92_RS08420;Name=D5F92_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08420;old_locus_tag=D5F92_08435 NZ_QYTJ01000045.1 Protein Homology CDS 272 958 . + 0 ID=cds-WP_000714060.1;Parent=gene-D5F92_RS08420;Dbxref=GenBank:WP_000714060.1;Name=WP_000714060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714057.1;locus_tag=D5F92_RS08420;product=hypothetical protein;protein_id=WP_000714060.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 1066 2073 . + . ID=gene-D5F92_RS08425;Name=D5F92_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08425;old_locus_tag=D5F92_08440 NZ_QYTJ01000045.1 Protein Homology CDS 1066 2073 . + 0 ID=cds-WP_000897651.1;Parent=gene-D5F92_RS08425;Dbxref=GenBank:WP_000897651.1;Name=WP_000897651.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000897649.1;locus_tag=D5F92_RS08425;product=YeiH family protein;protein_id=WP_000897651.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 2147 3523 . + . ID=gene-D5F92_RS08430;Name=D5F92_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08430;old_locus_tag=D5F92_08445 NZ_QYTJ01000045.1 Protein Homology CDS 2147 3523 . + 0 ID=cds-WP_124749392.1;Parent=gene-D5F92_RS08430;Dbxref=GenBank:WP_124749392.1;Name=WP_124749392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480816.1;locus_tag=D5F92_RS08430;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_124749392.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 3666 5213 . + . ID=gene-D5F92_RS08440;Name=D5F92_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08440;old_locus_tag=D5F92_08455 NZ_QYTJ01000045.1 Protein Homology CDS 3666 5213 . + 0 ID=cds-WP_016502917.1;Parent=gene-D5F92_RS08440;Dbxref=GenBank:WP_016502917.1;Name=WP_016502917.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037479.1;locus_tag=D5F92_RS08440;product=BCCT family transporter;protein_id=WP_016502917.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 5236 6075 . - . ID=gene-D5F92_RS08445;Name=D5F92_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08445;old_locus_tag=D5F92_08460 NZ_QYTJ01000045.1 Protein Homology CDS 5236 6075 . - 0 ID=cds-WP_260424800.1;Parent=gene-D5F92_RS08445;Dbxref=GenBank:WP_260424800.1;Name=WP_260424800.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003099793.1;locus_tag=D5F92_RS08445;product=polysaccharide deacetylase family protein;protein_id=WP_260424800.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 6299 7582 . + . ID=gene-D5F92_RS08450;Name=D5F92_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08450;old_locus_tag=D5F92_08465 NZ_QYTJ01000045.1 Protein Homology CDS 6299 7582 . + 0 ID=cds-WP_086163354.1;Parent=gene-D5F92_RS08450;Dbxref=GenBank:WP_086163354.1;Name=WP_086163354.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480813.1;locus_tag=D5F92_RS08450;product=homoserine dehydrogenase;protein_id=WP_086163354.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 7584 8450 . + . ID=gene-D5F92_RS08455;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=D5F92_RS08455;old_locus_tag=D5F92_08470 NZ_QYTJ01000045.1 Protein Homology CDS 7584 8450 . + 0 ID=cds-WP_001220328.1;Parent=gene-D5F92_RS08455;Dbxref=GenBank:WP_001220328.1;Name=WP_001220328.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767626.1;locus_tag=D5F92_RS08455;product=homoserine kinase;protein_id=WP_001220328.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 8437 9324 . + . ID=gene-D5F92_RS08460;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D5F92_RS08460;old_locus_tag=D5F92_08475 NZ_QYTJ01000045.1 Protein Homology CDS 8437 9324 . + 0 ID=cds-WP_016502914.1;Parent=gene-D5F92_RS08460;Dbxref=GenBank:WP_016502914.1;Name=WP_016502914.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767746.1;locus_tag=D5F92_RS08460;product=EamA family transporter RarD;protein_id=WP_016502914.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 9326 10588 . + . ID=gene-D5F92_RS08465;Name=D5F92_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08465;old_locus_tag=D5F92_08480 NZ_QYTJ01000045.1 Protein Homology CDS 9326 10588 . + 0 ID=cds-WP_000222112.1;Parent=gene-D5F92_RS08465;Dbxref=GenBank:WP_000222112.1;Name=WP_000222112.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222122.1;locus_tag=D5F92_RS08465;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_000222112.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 10607 11170 . + . ID=gene-D5F92_RS08470;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=D5F92_RS08470;old_locus_tag=D5F92_08485 NZ_QYTJ01000045.1 Protein Homology CDS 10607 11170 . + 0 ID=cds-WP_001133587.1;Parent=gene-D5F92_RS08470;Dbxref=GenBank:WP_001133587.1;Name=WP_001133587.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133588.1;locus_tag=D5F92_RS08470;product=GTP cyclohydrolase I FolE;protein_id=WP_001133587.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 11174 11977 . + . ID=gene-D5F92_RS08475;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D5F92_RS08475;old_locus_tag=D5F92_08490 NZ_QYTJ01000045.1 Protein Homology CDS 11174 11977 . + 0 ID=cds-WP_000690156.1;Parent=gene-D5F92_RS08475;Dbxref=GenBank:WP_000690156.1;Name=WP_000690156.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632031.1;locus_tag=D5F92_RS08475;product=dihydropteroate synthase;protein_id=WP_000690156.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 11979 12341 . + . ID=gene-D5F92_RS08480;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=D5F92_RS08480;old_locus_tag=D5F92_08495 NZ_QYTJ01000045.1 Protein Homology CDS 11979 12341 . + 0 ID=cds-WP_000358072.1;Parent=gene-D5F92_RS08480;Dbxref=GenBank:WP_000358072.1;Name=WP_000358072.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358072.1;locus_tag=D5F92_RS08480;product=dihydroneopterin aldolase;protein_id=WP_000358072.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 12338 12826 . + . ID=gene-D5F92_RS08485;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=D5F92_RS08485;old_locus_tag=D5F92_08500 NZ_QYTJ01000045.1 Protein Homology CDS 12338 12826 . + 0 ID=cds-WP_124749388.1;Parent=gene-D5F92_RS08485;Dbxref=GenBank:WP_124749388.1;Name=WP_124749388.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214503.1;locus_tag=D5F92_RS08485;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_124749388.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 12970 13872 . + . ID=gene-D5F92_RS08490;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=D5F92_RS08490;old_locus_tag=D5F92_08505 NZ_QYTJ01000045.1 Protein Homology CDS 12970 13872 . + 0 ID=cds-WP_000598027.1;Parent=gene-D5F92_RS08490;Dbxref=GenBank:WP_000598027.1;Name=WP_000598027.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650088.1;locus_tag=D5F92_RS08490;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000598027.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 13921 15075 . + . ID=gene-D5F92_RS08495;Name=D5F92_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08495;old_locus_tag=D5F92_08510 NZ_QYTJ01000045.1 Protein Homology CDS 13921 15075 . + 0 ID=cds-WP_000184098.1;Parent=gene-D5F92_RS08495;Dbxref=GenBank:WP_000184098.1;Name=WP_000184098.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184488.1;locus_tag=D5F92_RS08495;product=ABC transporter ATP-binding protein;protein_id=WP_000184098.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 15059 15853 . + . ID=gene-D5F92_RS08500;Name=D5F92_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08500;old_locus_tag=D5F92_08515 NZ_QYTJ01000045.1 Protein Homology CDS 15059 15853 . + 0 ID=cds-WP_000753812.1;Parent=gene-D5F92_RS08500;Dbxref=GenBank:WP_000753812.1;Name=WP_000753812.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632030.1;locus_tag=D5F92_RS08500;product=ABC transporter permease;protein_id=WP_000753812.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 15850 16626 . + . ID=gene-D5F92_RS08505;Name=D5F92_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08505;old_locus_tag=D5F92_08520 NZ_QYTJ01000045.1 Protein Homology CDS 15850 16626 . + 0 ID=cds-WP_124785515.1;Parent=gene-D5F92_RS08505;Dbxref=GenBank:WP_124785515.1;Name=WP_124785515.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712704.1;locus_tag=D5F92_RS08505;product=ABC transporter permease;protein_id=WP_124785515.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 16619 17692 . + . ID=gene-D5F92_RS08510;Name=D5F92_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08510;old_locus_tag=D5F92_08525 NZ_QYTJ01000045.1 Protein Homology CDS 16619 17692 . + 0 ID=cds-WP_016480809.1;Parent=gene-D5F92_RS08510;Dbxref=GenBank:WP_016480809.1;Name=WP_016480809.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632028.1;locus_tag=D5F92_RS08510;product=ABC transporter substrate-binding protein;protein_id=WP_016480809.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 17801 19333 . + . ID=gene-D5F92_RS08515;Name=D5F92_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08515;old_locus_tag=D5F92_08530 NZ_QYTJ01000045.1 Protein Homology CDS 17801 19333 . + 0 ID=cds-WP_016480808.1;Parent=gene-D5F92_RS08515;Dbxref=GenBank:WP_016480808.1;Name=WP_016480808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646779.1;locus_tag=D5F92_RS08515;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=WP_016480808.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 19390 20319 . - . ID=gene-D5F92_RS08520;Name=D5F92_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08520;old_locus_tag=D5F92_08535 NZ_QYTJ01000045.1 Protein Homology CDS 19390 20319 . - 0 ID=cds-WP_016480807.1;Parent=gene-D5F92_RS08520;Dbxref=GenBank:WP_016480807.1;Name=WP_016480807.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086432.1;locus_tag=D5F92_RS08520;product=helix-turn-helix transcriptional regulator;protein_id=WP_016480807.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq pseudogene 20581 20760 . + . ID=gene-D5F92_RS11540;Name=D5F92_RS11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11540;old_locus_tag=D5F92_08540;partial=true;pseudo=true;start_range=.,20581 NZ_QYTJ01000045.1 Protein Homology CDS 20581 20760 . + 0 ID=cds-D5F92_RS11540;Parent=gene-D5F92_RS11540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894089.1;locus_tag=D5F92_RS11540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,20581;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 20943 21764 . + . ID=gene-D5F92_RS08530;Name=D5F92_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08530;old_locus_tag=D5F92_08545 NZ_QYTJ01000045.1 Protein Homology CDS 20943 21764 . + 0 ID=cds-WP_016480806.1;Parent=gene-D5F92_RS08530;Dbxref=GenBank:WP_016480806.1;Name=WP_016480806.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593351.1;locus_tag=D5F92_RS08530;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016480806.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 21865 22479 . + . ID=gene-D5F92_RS08535;Name=D5F92_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08535;old_locus_tag=D5F92_08550 NZ_QYTJ01000045.1 Protein Homology CDS 21865 22479 . + 0 ID=cds-WP_016502912.1;Parent=gene-D5F92_RS08535;Dbxref=GenBank:WP_016502912.1;Name=WP_016502912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895129.1;locus_tag=D5F92_RS08535;product=SGNH/GDSL hydrolase family protein;protein_id=WP_016502912.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 22639 24078 . + . ID=gene-D5F92_RS08540;Name=D5F92_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08540;old_locus_tag=D5F92_08555 NZ_QYTJ01000045.1 Protein Homology CDS 22639 24078 . + 0 ID=cds-WP_180383431.1;Parent=gene-D5F92_RS08540;Dbxref=GenBank:WP_180383431.1;Name=WP_180383431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989488.1;locus_tag=D5F92_RS08540;product=6-phospho-beta-glucosidase;protein_id=WP_180383431.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 24169 25302 . + . ID=gene-D5F92_RS08545;Name=D5F92_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08545;old_locus_tag=D5F92_08560 NZ_QYTJ01000045.1 Protein Homology CDS 24169 25302 . + 0 ID=cds-WP_000667246.1;Parent=gene-D5F92_RS08545;Dbxref=GenBank:WP_000667246.1;Name=WP_000667246.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667240.1;locus_tag=D5F92_RS08545;product=AI-2E family transporter;protein_id=WP_000667246.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 25398 26078 . + . ID=gene-D5F92_RS08550;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=D5F92_RS08550;old_locus_tag=D5F92_08565 NZ_QYTJ01000045.1 Protein Homology CDS 25398 26078 . + 0 ID=cds-WP_000274751.1;Parent=gene-D5F92_RS08550;Dbxref=GenBank:WP_000274751.1;Name=WP_000274751.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274751.1;locus_tag=D5F92_RS08550;product=RadC family protein;protein_id=WP_000274751.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 26091 26729 . - . ID=gene-D5F92_RS08555;Name=D5F92_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08555;old_locus_tag=D5F92_08570 NZ_QYTJ01000045.1 Protein Homology CDS 26091 26729 . - 0 ID=cds-WP_000605175.1;Parent=gene-D5F92_RS08555;Dbxref=GenBank:WP_000605175.1;Name=WP_000605175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771355.1;locus_tag=D5F92_RS08555;product=redox-sensing transcriptional repressor Rex;protein_id=WP_000605175.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 26884 27231 . - . ID=gene-D5F92_RS08560;Name=D5F92_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08560;old_locus_tag=D5F92_08575 NZ_QYTJ01000045.1 Protein Homology CDS 26884 27231 . - 0 ID=cds-WP_000863499.1;Parent=gene-D5F92_RS08560;Dbxref=GenBank:WP_000863499.1;Name=WP_000863499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480804.1;locus_tag=D5F92_RS08560;product=DUF1831 domain-containing protein;protein_id=WP_000863499.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 27233 28348 . - . ID=gene-D5F92_RS08565;Name=D5F92_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08565;old_locus_tag=D5F92_08580 NZ_QYTJ01000045.1 Protein Homology CDS 27233 28348 . - 0 ID=cds-WP_000639608.1;Parent=gene-D5F92_RS08565;Dbxref=GenBank:WP_000639608.1;Name=WP_000639608.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639599.1;locus_tag=D5F92_RS08565;product=cysteine desulfurase family protein;protein_id=WP_000639608.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 28352 29326 . - . ID=gene-D5F92_RS08570;Name=D5F92_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08570;old_locus_tag=D5F92_08585 NZ_QYTJ01000045.1 Protein Homology CDS 28352 29326 . - 0 ID=cds-WP_000840698.1;Parent=gene-D5F92_RS08570;Dbxref=GenBank:WP_000840698.1;Name=WP_000840698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840703.1;locus_tag=D5F92_RS08570;product=ribose-phosphate diphosphokinase;protein_id=WP_000840698.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 29503 30075 . - . ID=gene-D5F92_RS08575;Name=D5F92_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08575;old_locus_tag=D5F92_08590 NZ_QYTJ01000045.1 Protein Homology CDS 29503 30075 . - 0 ID=cds-WP_000149079.1;Parent=gene-D5F92_RS08575;Dbxref=GenBank:WP_000149079.1;Name=WP_000149079.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480803.1;locus_tag=D5F92_RS08575;product=CYTH domain-containing protein;protein_id=WP_000149079.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 30185 30856 . + . ID=gene-D5F92_RS08580;Name=D5F92_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08580;old_locus_tag=D5F92_08595 NZ_QYTJ01000045.1 Protein Homology CDS 30185 30856 . + 0 ID=cds-WP_000061344.1;Parent=gene-D5F92_RS08580;Dbxref=GenBank:WP_000061344.1;Name=WP_000061344.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771989.1;locus_tag=D5F92_RS08580;product=GTP pyrophosphokinase;protein_id=WP_000061344.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 30831 31667 . + . ID=gene-D5F92_RS08585;Name=D5F92_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08585;old_locus_tag=D5F92_08600 NZ_QYTJ01000045.1 Protein Homology CDS 30831 31667 . + 0 ID=cds-WP_000192910.1;Parent=gene-D5F92_RS08585;Dbxref=GenBank:WP_000192910.1;Name=WP_000192910.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192906.1;locus_tag=D5F92_RS08585;product=NAD kinase;protein_id=WP_000192910.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 31664 32548 . + . ID=gene-D5F92_RS08590;Name=D5F92_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08590;old_locus_tag=D5F92_08605 NZ_QYTJ01000045.1 Protein Homology CDS 31664 32548 . + 0 ID=cds-WP_000667471.1;Parent=gene-D5F92_RS08590;Dbxref=GenBank:WP_000667471.1;Name=WP_000667471.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667470.1;locus_tag=D5F92_RS08590;product=RluA family pseudouridine synthase;protein_id=WP_000667471.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 32574 33566 . + . ID=gene-D5F92_RS08595;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=D5F92_RS08595;old_locus_tag=D5F92_08610 NZ_QYTJ01000045.1 Protein Homology CDS 32574 33566 . + 0 ID=cds-WP_001257096.1;Parent=gene-D5F92_RS08595;Dbxref=GenBank:WP_001257096.1;Name=WP_001257096.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767953.1;locus_tag=D5F92_RS08595;product=phosphate acetyltransferase;protein_id=WP_001257096.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 33628 34389 . + . ID=gene-D5F92_RS08600;Name=D5F92_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08600;old_locus_tag=D5F92_08615 NZ_QYTJ01000045.1 Protein Homology CDS 33628 34389 . + 0 ID=cds-WP_086163353.1;Parent=gene-D5F92_RS08600;Dbxref=GenBank:WP_086163353.1;Name=WP_086163353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649058.1;locus_tag=D5F92_RS08600;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_086163353.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 34524 36524 . + . ID=gene-D5F92_RS08605;Name=D5F92_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08605;old_locus_tag=D5F92_08620 NZ_QYTJ01000045.1 Protein Homology CDS 34524 36524 . + 0 ID=cds-WP_001164948.1;Parent=gene-D5F92_RS08605;Dbxref=GenBank:WP_001164948.1;Name=WP_001164948.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164946.1;locus_tag=D5F92_RS08605;product=KUP/HAK/KT family potassium transporter;protein_id=WP_001164948.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 36596 37267 . - . ID=gene-D5F92_RS08610;Name=D5F92_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08610;old_locus_tag=D5F92_08625 NZ_QYTJ01000045.1 Protein Homology CDS 36596 37267 . - 0 ID=cds-WP_000853096.1;Parent=gene-D5F92_RS08610;Dbxref=GenBank:WP_000853096.1;Name=WP_000853096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885905.1;locus_tag=D5F92_RS08610;product=hypothetical protein;protein_id=WP_000853096.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 37559 38899 . + . ID=gene-D5F92_RS08615;Name=D5F92_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08615;old_locus_tag=D5F92_08630 NZ_QYTJ01000045.1 Protein Homology CDS 37559 38899 . + 0 ID=cds-WP_016502906.1;Parent=gene-D5F92_RS08615;Dbxref=GenBank:WP_016502906.1;Name=WP_016502906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480798.1;locus_tag=D5F92_RS08615;product=MFS transporter;protein_id=WP_016502906.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 39101 40084 . + . ID=gene-D5F92_RS08620;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=D5F92_RS08620;old_locus_tag=D5F92_08635 NZ_QYTJ01000045.1 Protein Homology CDS 39101 40084 . + 0 ID=cds-WP_016502905.1;Parent=gene-D5F92_RS08620;Dbxref=GenBank:WP_016502905.1;Name=WP_016502905.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891361.1;locus_tag=D5F92_RS08620;product=GMP reductase;protein_id=WP_016502905.1;transl_table=11 NZ_QYTJ01000045.1 cmsearch riboswitch 40140 40235 . + . ID=id-NZ_QYTJ01000045.1:40140..40235;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000045.1 RefSeq gene 40340 40921 . + . ID=gene-D5F92_RS08625;Name=D5F92_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08625;old_locus_tag=D5F92_08640 NZ_QYTJ01000045.1 Protein Homology CDS 40340 40921 . + 0 ID=cds-WP_000770389.1;Parent=gene-D5F92_RS08625;Dbxref=GenBank:WP_000770389.1;Name=WP_000770389.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770392.1;locus_tag=D5F92_RS08625;product=xanthine phosphoribosyltransferase;protein_id=WP_000770389.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 40921 42195 . + . ID=gene-D5F92_RS08630;Name=D5F92_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08630;old_locus_tag=D5F92_08645 NZ_QYTJ01000045.1 Protein Homology CDS 40921 42195 . + 0 ID=cds-WP_000671148.1;Parent=gene-D5F92_RS08630;Dbxref=GenBank:WP_000671148.1;Name=WP_000671148.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671521.1;locus_tag=D5F92_RS08630;product=nucleobase:cation symporter-2 family protein;protein_id=WP_000671148.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 42294 43082 . - . ID=gene-D5F92_RS08635;Name=D5F92_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08635;old_locus_tag=D5F92_08650 NZ_QYTJ01000045.1 Protein Homology CDS 42294 43082 . - 0 ID=cds-WP_000051852.1;Parent=gene-D5F92_RS08635;Dbxref=GenBank:WP_000051852.1;Name=WP_000051852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051854.1;locus_tag=D5F92_RS08635;product=formate/nitrite transporter family protein;protein_id=WP_000051852.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 43181 44416 . - . ID=gene-D5F92_RS08640;Name=D5F92_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08640;old_locus_tag=D5F92_08655 NZ_QYTJ01000045.1 Protein Homology CDS 43181 44416 . - 0 ID=cds-WP_000673640.1;Parent=gene-D5F92_RS08640;Dbxref=GenBank:WP_000673640.1;Name=WP_000673640.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673646.1;locus_tag=D5F92_RS08640;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000673640.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 44440 45042 . - . ID=gene-D5F92_RS08645;Name=D5F92_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08645;old_locus_tag=D5F92_08660 NZ_QYTJ01000045.1 Protein Homology CDS 44440 45042 . - 0 ID=cds-WP_000766628.1;Parent=gene-D5F92_RS08645;Dbxref=GenBank:WP_000766628.1;Name=WP_000766628.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308468.1;locus_tag=D5F92_RS08645;product=NADPH-dependent FMN reductase;protein_id=WP_000766628.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 45060 45998 . - . ID=gene-D5F92_RS08650;Name=D5F92_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08650;old_locus_tag=D5F92_08665 NZ_QYTJ01000045.1 Protein Homology CDS 45060 45998 . - 0 ID=cds-WP_016502903.1;Parent=gene-D5F92_RS08650;Dbxref=GenBank:WP_016502903.1;Name=WP_016502903.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177180.1;locus_tag=D5F92_RS08650;product=FAD:protein FMN transferase;protein_id=WP_016502903.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 46147 46329 . - . ID=gene-D5F92_RS08660;Name=D5F92_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08660;old_locus_tag=D5F92_08675 NZ_QYTJ01000045.1 Protein Homology CDS 46147 46329 . - 0 ID=cds-WP_001117229.1;Parent=gene-D5F92_RS08660;Dbxref=GenBank:WP_001117229.1;Name=WP_001117229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117229.1;locus_tag=D5F92_RS08660;product=4-oxalocrotonate tautomerase;protein_id=WP_001117229.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 46467 47036 . + . ID=gene-D5F92_RS08665;Name=D5F92_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08665;old_locus_tag=D5F92_08680 NZ_QYTJ01000045.1 Protein Homology CDS 46467 47036 . + 0 ID=cds-WP_000068109.1;Parent=gene-D5F92_RS08665;Dbxref=GenBank:WP_000068109.1;Name=WP_000068109.1;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068112.1;locus_tag=D5F92_RS08665;product=thymidine kinase;protein_id=WP_000068109.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 47071 48150 . + . ID=gene-D5F92_RS08670;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=D5F92_RS08670;old_locus_tag=D5F92_08685 NZ_QYTJ01000045.1 Protein Homology CDS 47071 48150 . + 0 ID=cds-WP_001028826.1;Parent=gene-D5F92_RS08670;Dbxref=GenBank:WP_001028826.1;Name=WP_001028826.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262255.1;locus_tag=D5F92_RS08670;product=peptide chain release factor 1;protein_id=WP_001028826.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 48150 48980 . + . ID=gene-D5F92_RS08675;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=D5F92_RS08675;old_locus_tag=D5F92_08690 NZ_QYTJ01000045.1 Protein Homology CDS 48150 48980 . + 0 ID=cds-WP_001104941.1;Parent=gene-D5F92_RS08675;Dbxref=GenBank:WP_001104941.1;Name=WP_001104941.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104950.1;locus_tag=D5F92_RS08675;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_001104941.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 48973 49569 . + . ID=gene-D5F92_RS08680;Name=D5F92_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08680;old_locus_tag=D5F92_08695 NZ_QYTJ01000045.1 Protein Homology CDS 48973 49569 . + 0 ID=cds-WP_000998734.1;Parent=gene-D5F92_RS08680;Dbxref=GenBank:WP_000998734.1;Name=WP_000998734.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998738.1;locus_tag=D5F92_RS08680;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000998734.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 49661 50917 . + . ID=gene-D5F92_RS08685;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=D5F92_RS08685;old_locus_tag=D5F92_08700 NZ_QYTJ01000045.1 Protein Homology CDS 49661 50917 . + 0 ID=cds-WP_000575546.1;Parent=gene-D5F92_RS08685;Dbxref=GenBank:WP_000575546.1;Name=WP_000575546.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863152.1;locus_tag=D5F92_RS08685;product=serine hydroxymethyltransferase;protein_id=WP_000575546.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 50922 51899 . + . ID=gene-D5F92_RS08690;Name=D5F92_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08690;old_locus_tag=D5F92_08705 NZ_QYTJ01000045.1 Protein Homology CDS 50922 51899 . + 0 ID=cds-WP_000968655.1;Parent=gene-D5F92_RS08690;Dbxref=GenBank:WP_000968655.1;Name=WP_000968655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645607.1;locus_tag=D5F92_RS08690;product=nucleoid-associated protein;protein_id=WP_000968655.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 51901 52503 . + . ID=gene-D5F92_RS08695;Name=D5F92_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08695;old_locus_tag=D5F92_08710 NZ_QYTJ01000045.1 Protein Homology CDS 51901 52503 . + 0 ID=cds-WP_000472259.1;Parent=gene-D5F92_RS08695;Dbxref=GenBank:WP_000472259.1;Name=WP_000472259.1;Ontology_term=GO:0016052;gbkey=CDS;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647126.1;locus_tag=D5F92_RS08695;product=lysozyme family protein;protein_id=WP_000472259.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 52515 54233 . + . ID=gene-D5F92_RS08700;Name=D5F92_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08700;old_locus_tag=D5F92_08715 NZ_QYTJ01000045.1 Protein Homology CDS 52515 54233 . + 0 ID=cds-WP_086163350.1;Parent=gene-D5F92_RS08700;Dbxref=GenBank:WP_086163350.1;Name=WP_086163350.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826948.1;locus_tag=D5F92_RS08700;product=ABC transporter ATP-binding protein;protein_id=WP_086163350.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 54234 55967 . + . ID=gene-D5F92_RS08705;Name=D5F92_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08705;old_locus_tag=D5F92_08720 NZ_QYTJ01000045.1 Protein Homology CDS 54234 55967 . + 0 ID=cds-WP_016502900.1;Parent=gene-D5F92_RS08705;Dbxref=GenBank:WP_016502900.1;Name=WP_016502900.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647639.1;locus_tag=D5F92_RS08705;product=ABC transporter ATP-binding protein;protein_id=WP_016502900.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 55981 56178 . + . ID=gene-D5F92_RS08710;Name=D5F92_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08710;old_locus_tag=D5F92_08725 NZ_QYTJ01000045.1 Protein Homology CDS 55981 56178 . + 0 ID=cds-WP_000746856.1;Parent=gene-D5F92_RS08710;Dbxref=GenBank:WP_000746856.1;Name=WP_000746856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746853.1;locus_tag=D5F92_RS08710;product=hypothetical protein;protein_id=WP_000746856.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 56242 57960 . - . ID=gene-D5F92_RS08715;Name=D5F92_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08715;old_locus_tag=D5F92_08730 NZ_QYTJ01000045.1 Protein Homology CDS 56242 57960 . - 0 ID=cds-WP_000222544.1;Parent=gene-D5F92_RS08715;Dbxref=GenBank:WP_000222544.1;Name=WP_000222544.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222553.1;locus_tag=D5F92_RS08715;product=phospho-sugar mutase;protein_id=WP_000222544.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 58070 58642 . - . ID=gene-D5F92_RS08720;Name=D5F92_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08720;old_locus_tag=D5F92_08735 NZ_QYTJ01000045.1 Protein Homology CDS 58070 58642 . - 0 ID=cds-WP_000728786.1;Parent=gene-D5F92_RS08720;Dbxref=GenBank:WP_000728786.1;Name=WP_000728786.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480791.1;locus_tag=D5F92_RS08720;product=ECF transporter S component;protein_id=WP_000728786.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 58688 59230 . - . ID=gene-D5F92_RS08725;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=D5F92_RS08725;old_locus_tag=D5F92_08740 NZ_QYTJ01000045.1 Protein Homology CDS 58688 59230 . - 0 ID=cds-WP_124785517.1;Parent=gene-D5F92_RS08725;Dbxref=GenBank:WP_124785517.1;Name=WP_124785517.1;Ontology_term=GO:0015937,GO:0004633;gbkey=CDS;gene=coaC;go_function=phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595815.1;locus_tag=D5F92_RS08725;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_124785517.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 59223 59909 . - . ID=gene-D5F92_RS08730;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=D5F92_RS08730;old_locus_tag=D5F92_08745 NZ_QYTJ01000045.1 Protein Homology CDS 59223 59909 . - 0 ID=cds-WP_086163357.1;Parent=gene-D5F92_RS08730;Dbxref=GenBank:WP_086163357.1;Name=WP_086163357.1;Ontology_term=GO:0015937,GO:0004632;gbkey=CDS;gene=coaB;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019320019.1;locus_tag=D5F92_RS08730;product=phosphopantothenate--cysteine ligase;protein_id=WP_086163357.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 60063 60899 . + . ID=gene-D5F92_RS08735;Name=D5F92_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08735;old_locus_tag=D5F92_08750 NZ_QYTJ01000045.1 Protein Homology CDS 60063 60899 . + 0 ID=cds-WP_000455160.1;Parent=gene-D5F92_RS08735;Dbxref=GenBank:WP_000455160.1;Name=WP_000455160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455162.1;locus_tag=D5F92_RS08735;product=lipoate--protein ligase family protein;protein_id=WP_000455160.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 60892 62091 . + . ID=gene-D5F92_RS08740;Name=D5F92_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08740;old_locus_tag=D5F92_08755 NZ_QYTJ01000045.1 Protein Homology CDS 60892 62091 . + 0 ID=cds-WP_016502896.1;Parent=gene-D5F92_RS08740;Dbxref=GenBank:WP_016502896.1;Name=WP_016502896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649443.1;locus_tag=D5F92_RS08740;product=NADH-dependent flavin oxidoreductase;protein_id=WP_016502896.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 62088 63074 . + . ID=gene-D5F92_RS08745;Name=D5F92_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08745;old_locus_tag=D5F92_08760 NZ_QYTJ01000045.1 Protein Homology CDS 62088 63074 . + 0 ID=cds-WP_016502895.1;Parent=gene-D5F92_RS08745;Dbxref=GenBank:WP_016502895.1;Name=WP_016502895.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778222.1;locus_tag=D5F92_RS08745;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_016502895.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 63103 63435 . + . ID=gene-D5F92_RS08750;Name=D5F92_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08750;old_locus_tag=D5F92_08765 NZ_QYTJ01000045.1 Protein Homology CDS 63103 63435 . + 0 ID=cds-WP_000717326.1;Parent=gene-D5F92_RS08750;Dbxref=GenBank:WP_000717326.1;Name=WP_000717326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717324.1;locus_tag=D5F92_RS08750;product=glycine cleavage system protein H;protein_id=WP_000717326.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 63428 64246 . + . ID=gene-D5F92_RS08755;Name=D5F92_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08755;old_locus_tag=D5F92_08770 NZ_QYTJ01000045.1 Protein Homology CDS 63428 64246 . + 0 ID=cds-WP_001133601.1;Parent=gene-D5F92_RS08755;Dbxref=GenBank:WP_001133601.1;Name=WP_001133601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767264.1;locus_tag=D5F92_RS08755;product=protein-ADP-ribose hydrolase;protein_id=WP_001133601.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq gene 64215 65093 . + . ID=gene-D5F92_RS08760;Name=D5F92_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08760;old_locus_tag=D5F92_08775 NZ_QYTJ01000045.1 Protein Homology CDS 64215 65093 . + 0 ID=cds-WP_000219405.1;Parent=gene-D5F92_RS08760;Dbxref=GenBank:WP_000219405.1;Name=WP_000219405.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219408.1;locus_tag=D5F92_RS08760;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_000219405.1;transl_table=11 NZ_QYTJ01000045.1 RefSeq pseudogene 65120 65295 . + . ID=gene-D5F92_RS08765;Name=D5F92_RS08765;end_range=65295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08765;old_locus_tag=D5F92_08780;partial=true;pseudo=true NZ_QYTJ01000045.1 Protein Homology CDS 65120 65295 . + 0 ID=cds-D5F92_RS08765;Parent=gene-D5F92_RS08765;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=65295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280824.1;locus_tag=D5F92_RS08765;partial=true;product=lipoate--protein ligase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000046.1 1 52770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000046.1 RefSeq region 1 52770 . + . ID=NZ_QYTJ01000046.1:1..52770;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000046.1 RefSeq gene 1 647 . + . ID=gene-D5F92_RS08770;Name=D5F92_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08770;old_locus_tag=D5F92_08785;partial=true;start_range=.,1 NZ_QYTJ01000046.1 Protein Homology CDS 1 647 . + 2 ID=cds-WP_124785519.1;Parent=gene-D5F92_RS08770;Dbxref=GenBank:WP_124785519.1;Name=WP_124785519.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739798.1;locus_tag=D5F92_RS08770;partial=true;product=phosphopentomutase;protein_id=WP_124785519.1;start_range=.,1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 698 1105 . + . ID=gene-D5F92_RS08775;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=D5F92_RS08775;old_locus_tag=D5F92_08790 NZ_QYTJ01000046.1 Protein Homology CDS 698 1105 . + 0 ID=cds-WP_016502947.1;Parent=gene-D5F92_RS08775;Dbxref=GenBank:WP_016502947.1;Name=WP_016502947.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416958.1;locus_tag=D5F92_RS08775;product=arsenate reductase (glutaredoxin);protein_id=WP_016502947.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 1144 1953 . + . ID=gene-D5F92_RS08780;Name=D5F92_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08780;old_locus_tag=D5F92_08795 NZ_QYTJ01000046.1 Protein Homology CDS 1144 1953 . + 0 ID=cds-WP_000173383.1;Parent=gene-D5F92_RS08780;Dbxref=GenBank:WP_000173383.1;Name=WP_000173383.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647702.1;locus_tag=D5F92_RS08780;product=purine-nucleoside phosphorylase;protein_id=WP_000173383.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 1955 3211 . + . ID=gene-D5F92_RS08785;Name=D5F92_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08785;old_locus_tag=D5F92_08800 NZ_QYTJ01000046.1 Protein Homology CDS 1955 3211 . + 0 ID=cds-WP_086163384.1;Parent=gene-D5F92_RS08785;Dbxref=GenBank:WP_086163384.1;Name=WP_086163384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254664.1;locus_tag=D5F92_RS08785;product=chloride channel protein;protein_id=WP_086163384.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 3195 3905 . + . ID=gene-D5F92_RS08790;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=D5F92_RS08790;old_locus_tag=D5F92_08805 NZ_QYTJ01000046.1 Protein Homology CDS 3195 3905 . + 0 ID=cds-WP_000022113.1;Parent=gene-D5F92_RS08790;Dbxref=GenBank:WP_000022113.1;Name=WP_000022113.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022115.1;locus_tag=D5F92_RS08790;product=purine-nucleoside phosphorylase;protein_id=WP_000022113.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 3914 4681 . + . ID=gene-D5F92_RS08795;Name=D5F92_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08795;old_locus_tag=D5F92_08810 NZ_QYTJ01000046.1 Protein Homology CDS 3914 4681 . + 0 ID=cds-WP_000129272.1;Parent=gene-D5F92_RS08795;Dbxref=GenBank:WP_000129272.1;Name=WP_000129272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129264.1;locus_tag=D5F92_RS08795;product=hypothetical protein;protein_id=WP_000129272.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 4706 5629 . - . ID=gene-D5F92_RS08800;Name=D5F92_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08800;old_locus_tag=D5F92_08815 NZ_QYTJ01000046.1 Protein Homology CDS 4706 5629 . - 0 ID=cds-WP_124749402.1;Parent=gene-D5F92_RS08800;Dbxref=GenBank:WP_124749402.1;Name=WP_124749402.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502945.1;locus_tag=D5F92_RS08800;product=LysR family transcriptional regulator;protein_id=WP_124749402.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 5819 7276 . + . ID=gene-D5F92_RS08805;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=D5F92_RS08805;old_locus_tag=D5F92_08820 NZ_QYTJ01000046.1 Protein Homology CDS 5819 7276 . + 0 ID=cds-WP_124749400.1;Parent=gene-D5F92_RS08805;Dbxref=GenBank:WP_124749400.1;Name=WP_124749400.1;gbkey=CDS;gene=cpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065004.1;locus_tag=D5F92_RS08805;product=LCP family glycopolymer transferase CpsA;protein_id=WP_124749400.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 7282 8013 . + . ID=gene-D5F92_RS08810;Name=cps4B;gbkey=Gene;gene=cps4B;gene_biotype=protein_coding;locus_tag=D5F92_RS08810;old_locus_tag=D5F92_08825 NZ_QYTJ01000046.1 Protein Homology CDS 7282 8013 . + 0 ID=cds-WP_000565383.1;Parent=gene-D5F92_RS08810;Dbxref=GenBank:WP_000565383.1;Name=WP_000565383.1;gbkey=CDS;gene=cps4B;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647336.1;locus_tag=D5F92_RS08810;product=capsular polysaccharide biosynthesis protein Cps4B;protein_id=WP_000565383.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 8022 8714 . + . ID=gene-D5F92_RS08815;Name=D5F92_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08815;old_locus_tag=D5F92_08830 NZ_QYTJ01000046.1 Protein Homology CDS 8022 8714 . + 0 ID=cds-WP_017647704.1;Parent=gene-D5F92_RS08815;Dbxref=GenBank:WP_017647704.1;Name=WP_017647704.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285282.1;locus_tag=D5F92_RS08815;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_017647704.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 8725 9423 . + . ID=gene-D5F92_RS08820;Name=D5F92_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08820;old_locus_tag=D5F92_08835 NZ_QYTJ01000046.1 Protein Homology CDS 8725 9423 . + 0 ID=cds-WP_000197416.1;Parent=gene-D5F92_RS08820;Dbxref=GenBank:WP_000197416.1;Name=WP_000197416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197400.1;locus_tag=D5F92_RS08820;product=tyrosine-protein kinase;protein_id=WP_000197416.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 9436 10824 . + . ID=gene-D5F92_RS08825;Name=D5F92_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08825;old_locus_tag=D5F92_08840 NZ_QYTJ01000046.1 Protein Homology CDS 9436 10824 . + 0 ID=cds-WP_017647706.1;Parent=gene-D5F92_RS08825;Dbxref=GenBank:WP_017647706.1;Name=WP_017647706.1;Ontology_term=GO:0016740,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659574.1;locus_tag=D5F92_RS08825;product=sugar transferase;protein_id=WP_017647706.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 10848 11297 . + . ID=gene-D5F92_RS08830;Name=pssD;gbkey=Gene;gene=pssD;gene_biotype=protein_coding;locus_tag=D5F92_RS08830;old_locus_tag=D5F92_08845 NZ_QYTJ01000046.1 Protein Homology CDS 10848 11297 . + 0 ID=cds-WP_000686634.1;Parent=gene-D5F92_RS08830;Dbxref=GenBank:WP_000686634.1;Name=WP_000686634.1;Ontology_term=GO:0016740;gbkey=CDS;gene=pssD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650132.1;locus_tag=D5F92_RS08830;product=PssD/Cps14F family polysaccharide biosynthesis glycosyltransferase;protein_id=WP_000686634.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 11297 11770 . + . ID=gene-D5F92_RS08835;Name=D5F92_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08835;old_locus_tag=D5F92_08850 NZ_QYTJ01000046.1 Protein Homology CDS 11297 11770 . + 0 ID=cds-WP_000578448.1;Parent=gene-D5F92_RS08835;Dbxref=GenBank:WP_000578448.1;Name=WP_000578448.1;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578449.1;locus_tag=D5F92_RS08835;product=glycosyltransferase;protein_id=WP_000578448.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 11767 12912 . + . ID=gene-D5F92_RS08840;Name=D5F92_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08840;old_locus_tag=D5F92_08855 NZ_QYTJ01000046.1 Protein Homology CDS 11767 12912 . + 0 ID=cds-WP_001233887.1;Parent=gene-D5F92_RS08840;Dbxref=GenBank:WP_001233887.1;Name=WP_001233887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233887.1;locus_tag=D5F92_RS08840;product=capsule biosynthesis protein CapK;protein_id=WP_001233887.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 12909 13877 . + . ID=gene-D5F92_RS08845;Name=D5F92_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08845;old_locus_tag=D5F92_08860 NZ_QYTJ01000046.1 Protein Homology CDS 12909 13877 . + 0 ID=cds-WP_000660893.1;Parent=gene-D5F92_RS08845;Dbxref=GenBank:WP_000660893.1;Name=WP_000660893.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660896.1;locus_tag=D5F92_RS08845;product=glycosyltransferase family 2 protein;protein_id=WP_000660893.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 13911 14858 . + . ID=gene-D5F92_RS08850;Name=D5F92_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08850;old_locus_tag=D5F92_08865 NZ_QYTJ01000046.1 Protein Homology CDS 13911 14858 . + 0 ID=cds-WP_000591737.1;Parent=gene-D5F92_RS08850;Dbxref=GenBank:WP_000591737.1;Name=WP_000591737.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591736.1;locus_tag=D5F92_RS08850;product=glycosyltransferase family 2 protein;protein_id=WP_000591737.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 14942 15898 . + . ID=gene-D5F92_RS08855;Name=D5F92_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08855;old_locus_tag=D5F92_08870 NZ_QYTJ01000046.1 Protein Homology CDS 14942 15898 . + 0 ID=cds-WP_050197095.1;Parent=gene-D5F92_RS08855;Dbxref=GenBank:WP_050197095.1;Name=WP_050197095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181005.1;locus_tag=D5F92_RS08855;product=glycosyltransferase family 52;protein_id=WP_050197095.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 15895 17295 . + . ID=gene-D5F92_RS08860;Name=D5F92_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08860;old_locus_tag=D5F92_08875 NZ_QYTJ01000046.1 Protein Homology CDS 15895 17295 . + 0 ID=cds-WP_017647707.1;Parent=gene-D5F92_RS08860;Dbxref=GenBank:WP_017647707.1;Name=WP_017647707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093048.1;locus_tag=D5F92_RS08860;product=oligosaccharide flippase family protein;protein_id=WP_017647707.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 17295 18320 . + . ID=gene-D5F92_RS08865;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=D5F92_RS08865;old_locus_tag=D5F92_08880 NZ_QYTJ01000046.1 Protein Homology CDS 17295 18320 . + 0 ID=cds-WP_000262522.1;Parent=gene-D5F92_RS08865;Dbxref=GenBank:WP_000262522.1;Name=WP_000262522.1;Ontology_term=GO:0016051,GO:0003824;gbkey=CDS;gene=neuB;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262516.1;locus_tag=D5F92_RS08865;product=N-acetylneuraminate synthase;protein_id=WP_000262522.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 18397 19551 . + . ID=gene-D5F92_RS08870;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=D5F92_RS08870;old_locus_tag=D5F92_08885 NZ_QYTJ01000046.1 Protein Homology CDS 18397 19551 . + 0 ID=cds-WP_000717643.1;Parent=gene-D5F92_RS08870;Dbxref=GenBank:WP_000717643.1;Name=WP_000717643.1;Ontology_term=GO:0006047,GO:0008761;gbkey=CDS;gene=neuC;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=UDP-N-acetylglucosamine metabolic process|0006047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644210.1;locus_tag=D5F92_RS08870;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000717643.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 19548 20177 . + . ID=gene-D5F92_RS08875;Name=D5F92_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08875;old_locus_tag=D5F92_08890 NZ_QYTJ01000046.1 Protein Homology CDS 19548 20177 . + 0 ID=cds-WP_000727597.1;Parent=gene-D5F92_RS08875;Dbxref=GenBank:WP_000727597.1;Name=WP_000727597.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646802.1;locus_tag=D5F92_RS08875;product=acetyltransferase;protein_id=WP_000727597.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 20188 21429 . + . ID=gene-D5F92_RS08880;Name=neuA;gbkey=Gene;gene=neuA;gene_biotype=protein_coding;locus_tag=D5F92_RS08880;old_locus_tag=D5F92_08895 NZ_QYTJ01000046.1 Protein Homology CDS 20188 21429 . + 0 ID=cds-WP_000802346.1;Parent=gene-D5F92_RS08880;Dbxref=GenBank:WP_000802346.1;Name=WP_000802346.1;gbkey=CDS;gene=neuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000802346.1;locus_tag=D5F92_RS08880;product=N-acylneuraminate cytidylyltransferase;protein_id=WP_000802346.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 21543 22028 . + . ID=gene-D5F92_RS08885;Name=D5F92_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08885;old_locus_tag=D5F92_08900 NZ_QYTJ01000046.1 Protein Homology CDS 21543 22028 . + 0 ID=cds-WP_001209318.1;Parent=gene-D5F92_RS08885;Dbxref=GenBank:WP_001209318.1;Name=WP_001209318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644630.1;locus_tag=D5F92_RS08885;product=hypothetical protein;protein_id=WP_001209318.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 22127 22780 . + . ID=gene-D5F92_RS08890;Name=D5F92_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08890;old_locus_tag=D5F92_08905 NZ_QYTJ01000046.1 Protein Homology CDS 22127 22780 . + 0 ID=cds-WP_000682955.1;Parent=gene-D5F92_RS08890;Dbxref=GenBank:WP_000682955.1;Name=WP_000682955.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643623.1;locus_tag=D5F92_RS08890;product=uracil-DNA glycosylase;protein_id=WP_000682955.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 22846 23484 . - . ID=gene-D5F92_RS08895;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=D5F92_RS08895;old_locus_tag=D5F92_08910 NZ_QYTJ01000046.1 Protein Homology CDS 22846 23484 . - 0 ID=cds-WP_086163374.1;Parent=gene-D5F92_RS08895;Dbxref=GenBank:WP_086163374.1;Name=WP_086163374.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632050.1;locus_tag=D5F92_RS08895;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_086163374.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 23598 25547 . + . ID=gene-D5F92_RS08900;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=D5F92_RS08900;old_locus_tag=D5F92_08915 NZ_QYTJ01000046.1 Protein Homology CDS 23598 25547 . + 0 ID=cds-WP_180383574.1;Parent=gene-D5F92_RS08900;Dbxref=GenBank:WP_180383574.1;Name=WP_180383574.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632049.1;locus_tag=D5F92_RS08900;product=DNA topoisomerase IV subunit B;protein_id=WP_180383574.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 25681 28140 . + . ID=gene-D5F92_RS08905;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=D5F92_RS08905;old_locus_tag=D5F92_08920 NZ_QYTJ01000046.1 Protein Homology CDS 25681 28140 . + 0 ID=cds-WP_000065534.1;Parent=gene-D5F92_RS08905;Dbxref=GenBank:WP_000065534.1;Name=WP_000065534.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065524.1;locus_tag=D5F92_RS08905;product=DNA topoisomerase IV subunit A;protein_id=WP_000065534.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 28254 29276 . + . ID=gene-D5F92_RS08910;Name=D5F92_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08910;old_locus_tag=D5F92_08925 NZ_QYTJ01000046.1 Protein Homology CDS 28254 29276 . + 0 ID=cds-WP_086163372.1;Parent=gene-D5F92_RS08910;Dbxref=GenBank:WP_086163372.1;Name=WP_086163372.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961903.1;locus_tag=D5F92_RS08910;product=branched-chain amino acid aminotransferase;protein_id=WP_086163372.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 29360 29590 . + . ID=gene-D5F92_RS08915;Name=D5F92_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08915;old_locus_tag=D5F92_08930 NZ_QYTJ01000046.1 Protein Homology CDS 29360 29590 . + 0 ID=cds-WP_000037098.1;Parent=gene-D5F92_RS08915;Dbxref=GenBank:WP_000037098.1;Name=WP_000037098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001870505.1;locus_tag=D5F92_RS08915;product=DUF2969 domain-containing protein;protein_id=WP_000037098.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 29651 29731 . + . ID=gene-D5F92_RS08920;Name=D5F92_RS08920;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS08920;old_locus_tag=D5F92_08935 NZ_QYTJ01000046.1 tRNAscan-SE tRNA 29651 29731 . + . ID=rna-D5F92_RS08920;Parent=gene-D5F92_RS08920;anticodon=(pos:29685..29687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08920;product=tRNA-Tyr NZ_QYTJ01000046.1 tRNAscan-SE exon 29651 29731 . + . ID=exon-D5F92_RS08920-1;Parent=rna-D5F92_RS08920;anticodon=(pos:29685..29687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08920;product=tRNA-Tyr NZ_QYTJ01000046.1 RefSeq gene 29737 29808 . + . ID=gene-D5F92_RS08925;Name=D5F92_RS08925;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS08925;old_locus_tag=D5F92_08940 NZ_QYTJ01000046.1 tRNAscan-SE tRNA 29737 29808 . + . ID=rna-D5F92_RS08925;Parent=gene-D5F92_RS08925;anticodon=(pos:29769..29771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08925;product=tRNA-Gln NZ_QYTJ01000046.1 tRNAscan-SE exon 29737 29808 . + . ID=exon-D5F92_RS08925-1;Parent=rna-D5F92_RS08925;anticodon=(pos:29769..29771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08925;product=tRNA-Gln NZ_QYTJ01000046.1 RefSeq gene 29934 31136 . + . ID=gene-D5F92_RS08930;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=D5F92_RS08930;old_locus_tag=D5F92_08945 NZ_QYTJ01000046.1 Protein Homology CDS 29934 31136 . + 0 ID=cds-WP_001001614.1;Parent=gene-D5F92_RS08930;Dbxref=GenBank:WP_001001614.1;Name=WP_001001614.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002997242.1;locus_tag=D5F92_RS08930;product=30S ribosomal protein S1;protein_id=WP_001001614.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 31209 31280 . + . ID=gene-D5F92_RS08935;Name=D5F92_RS08935;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS08935;old_locus_tag=D5F92_08950 NZ_QYTJ01000046.1 tRNAscan-SE tRNA 31209 31280 . + . ID=rna-D5F92_RS08935;Parent=gene-D5F92_RS08935;anticodon=(pos:31242..31244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08935;product=tRNA-Arg NZ_QYTJ01000046.1 tRNAscan-SE exon 31209 31280 . + . ID=exon-D5F92_RS08935-1;Parent=rna-D5F92_RS08935;anticodon=(pos:31242..31244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS08935;product=tRNA-Arg NZ_QYTJ01000046.1 RefSeq pseudogene 31365 32394 . - . ID=gene-D5F92_RS08940;Name=D5F92_RS08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08940;old_locus_tag=D5F92_08955;pseudo=true NZ_QYTJ01000046.1 Protein Homology CDS 31365 32394 . - 0 ID=cds-D5F92_RS08940;Parent=gene-D5F92_RS08940;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323187.1;locus_tag=D5F92_RS08940;product=site-specific integrase;pseudo=true;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 32522 33130 . - . ID=gene-D5F92_RS08950;Name=D5F92_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08950;old_locus_tag=D5F92_08965 NZ_QYTJ01000046.1 Protein Homology CDS 32522 33130 . - 0 ID=cds-WP_086163370.1;Parent=gene-D5F92_RS08950;Dbxref=GenBank:WP_086163370.1;Name=WP_086163370.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438039.1;locus_tag=D5F92_RS08950;product=CD20-like domain-containing protein;protein_id=WP_086163370.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq pseudogene 33185 33884 . - . ID=gene-D5F92_RS08955;Name=D5F92_RS08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS08955;old_locus_tag=D5F92_08970;pseudo=true NZ_QYTJ01000046.1 Protein Homology CDS 33185 33884 . - 0 ID=cds-D5F92_RS08955;Parent=gene-D5F92_RS08955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013794263.1;locus_tag=D5F92_RS08955;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 34270 34548 . - . ID=gene-D5F92_RS08965;Name=D5F92_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08965;old_locus_tag=D5F92_08980 NZ_QYTJ01000046.1 Protein Homology CDS 34270 34548 . - 0 ID=cds-WP_257638799.1;Parent=gene-D5F92_RS08965;Dbxref=GenBank:WP_257638799.1;Name=WP_257638799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025695.7;locus_tag=D5F92_RS08965;product=DUF4393 domain-containing protein;protein_id=WP_257638799.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 34833 35456 . - . ID=gene-D5F92_RS08970;Name=D5F92_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08970;old_locus_tag=D5F92_08985 NZ_QYTJ01000046.1 Protein Homology CDS 34833 35456 . - 0 ID=cds-WP_000612517.1;Parent=gene-D5F92_RS08970;Dbxref=GenBank:WP_000612517.1;Name=WP_000612517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612522.1;locus_tag=D5F92_RS08970;product=DUF3862 domain-containing protein;protein_id=WP_000612517.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 35525 36220 . - . ID=gene-D5F92_RS08975;Name=D5F92_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08975;old_locus_tag=D5F92_08990 NZ_QYTJ01000046.1 Protein Homology CDS 35525 36220 . - 0 ID=cds-WP_000224245.1;Parent=gene-D5F92_RS08975;Dbxref=GenBank:WP_000224245.1;Name=WP_000224245.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632044.1;locus_tag=D5F92_RS08975;product=LrgB family protein;protein_id=WP_000224245.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 36201 36593 . - . ID=gene-D5F92_RS08980;Name=D5F92_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08980;old_locus_tag=D5F92_08995 NZ_QYTJ01000046.1 Protein Homology CDS 36201 36593 . - 0 ID=cds-WP_086163369.1;Parent=gene-D5F92_RS08980;Dbxref=GenBank:WP_086163369.1;Name=WP_086163369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647124.1;locus_tag=D5F92_RS08980;product=CidA/LrgA family protein;protein_id=WP_086163369.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 36752 37987 . - . ID=gene-D5F92_RS08985;Name=D5F92_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08985;old_locus_tag=D5F92_09000 NZ_QYTJ01000046.1 Protein Homology CDS 36752 37987 . - 0 ID=cds-WP_000235899.1;Parent=gene-D5F92_RS08985;Dbxref=GenBank:WP_000235899.1;Name=WP_000235899.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643783.1;locus_tag=D5F92_RS08985;product=cation diffusion facilitator family transporter;protein_id=WP_000235899.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 38051 39397 . - . ID=gene-D5F92_RS08990;Name=D5F92_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08990;old_locus_tag=D5F92_09005 NZ_QYTJ01000046.1 Protein Homology CDS 38051 39397 . - 0 ID=cds-WP_086163368.1;Parent=gene-D5F92_RS08990;Dbxref=GenBank:WP_086163368.1;Name=WP_086163368.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956728.1;locus_tag=D5F92_RS08990;product=alanine/glycine:cation symporter family protein;protein_id=WP_086163368.1;transl_table=11 NZ_QYTJ01000046.1 cmsearch riboswitch 39555 39687 . - . ID=id-NZ_QYTJ01000046.1:39555..39687;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000046.1 RefSeq gene 39995 41320 . + . ID=gene-D5F92_RS08995;Name=D5F92_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS08995;old_locus_tag=D5F92_09010 NZ_QYTJ01000046.1 Protein Homology CDS 39995 41320 . + 0 ID=cds-WP_000174081.1;Parent=gene-D5F92_RS08995;Dbxref=GenBank:WP_000174081.1;Name=WP_000174081.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020480284.1;locus_tag=D5F92_RS08995;product=uracil-xanthine permease family protein;protein_id=WP_000174081.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 41453 41839 . + . ID=gene-D5F92_RS09000;Name=D5F92_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09000;old_locus_tag=D5F92_09015 NZ_QYTJ01000046.1 Protein Homology CDS 41453 41839 . + 0 ID=cds-WP_000671265.1;Parent=gene-D5F92_RS09000;Dbxref=GenBank:WP_000671265.1;Name=WP_000671265.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480824.1;locus_tag=D5F92_RS09000;product=PaaI family thioesterase;protein_id=WP_000671265.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 41945 44224 . + . ID=gene-D5F92_RS09005;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=D5F92_RS09005;old_locus_tag=D5F92_09020 NZ_QYTJ01000046.1 Protein Homology CDS 41945 44224 . + 0 ID=cds-WP_124749396.1;Parent=gene-D5F92_RS09005;Dbxref=GenBank:WP_124749396.1;Name=WP_124749396.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068642.1;locus_tag=D5F92_RS09005;product=DNA helicase PcrA;protein_id=WP_124749396.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 44636 44881 . + . ID=gene-D5F92_RS09010;Name=D5F92_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09010;old_locus_tag=D5F92_09025 NZ_QYTJ01000046.1 Protein Homology CDS 44636 44881 . + 0 ID=cds-WP_086163366.1;Parent=gene-D5F92_RS09010;Dbxref=GenBank:WP_086163366.1;Name=WP_086163366.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523009.1;locus_tag=D5F92_RS09010;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_086163366.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 44929 45177 . + . ID=gene-D5F92_RS09015;Name=D5F92_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09015;old_locus_tag=D5F92_09030 NZ_QYTJ01000046.1 Protein Homology CDS 44929 45177 . + 0 ID=cds-WP_000053321.1;Parent=gene-D5F92_RS09015;Dbxref=GenBank:WP_000053321.1;Name=WP_000053321.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523011.1;locus_tag=D5F92_RS09015;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000053321.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 45192 45773 . + . ID=gene-D5F92_RS09020;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=D5F92_RS09020;old_locus_tag=D5F92_09035 NZ_QYTJ01000046.1 Protein Homology CDS 45192 45773 . + 0 ID=cds-WP_086163365.1;Parent=gene-D5F92_RS09020;Dbxref=GenBank:WP_086163365.1;Name=WP_086163365.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285291.1;locus_tag=D5F92_RS09020;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_086163365.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 45783 45977 . + . ID=gene-D5F92_RS09025;Name=D5F92_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09025;old_locus_tag=D5F92_09040 NZ_QYTJ01000046.1 Protein Homology CDS 45783 45977 . + 0 ID=cds-WP_001288927.1;Parent=gene-D5F92_RS09025;Dbxref=GenBank:WP_001288927.1;Name=WP_001288927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288926.1;locus_tag=D5F92_RS09025;product=DUF2273 domain-containing protein;protein_id=WP_001288927.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 46033 46575 . + . ID=gene-D5F92_RS09030;Name=D5F92_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09030;old_locus_tag=D5F92_09045 NZ_QYTJ01000046.1 Protein Homology CDS 46033 46575 . + 0 ID=cds-WP_086163364.1;Parent=gene-D5F92_RS09030;Dbxref=GenBank:WP_086163364.1;Name=WP_086163364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632041.1;locus_tag=D5F92_RS09030;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_086163364.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 46622 46819 . + . ID=gene-D5F92_RS09035;Name=D5F92_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09035;old_locus_tag=D5F92_09050 NZ_QYTJ01000046.1 Protein Homology CDS 46622 46819 . + 0 ID=cds-WP_001288036.1;Parent=gene-D5F92_RS09035;Dbxref=GenBank:WP_001288036.1;Name=WP_001288036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288036.1;locus_tag=D5F92_RS09035;product=CsbD family protein;protein_id=WP_001288036.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 46841 47392 . + . ID=gene-D5F92_RS09040;Name=D5F92_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09040;old_locus_tag=D5F92_09055 NZ_QYTJ01000046.1 Protein Homology CDS 46841 47392 . + 0 ID=cds-WP_000431296.1;Parent=gene-D5F92_RS09040;Dbxref=GenBank:WP_000431296.1;Name=WP_000431296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649823.1;locus_tag=D5F92_RS09040;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_000431296.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 47556 48197 . + . ID=gene-D5F92_RS09045;Name=D5F92_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09045;old_locus_tag=D5F92_09060 NZ_QYTJ01000046.1 Protein Homology CDS 47556 48197 . + 0 ID=cds-WP_124749394.1;Parent=gene-D5F92_RS09045;Dbxref=GenBank:WP_124749394.1;Name=WP_124749394.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253259.1;locus_tag=D5F92_RS09045;product=TrkA C-terminal domain-containing protein;protein_id=WP_124749394.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 48202 48966 . + . ID=gene-D5F92_RS09050;Name=D5F92_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09050;old_locus_tag=D5F92_09065 NZ_QYTJ01000046.1 Protein Homology CDS 48202 48966 . + 0 ID=cds-WP_086163362.1;Parent=gene-D5F92_RS09050;Dbxref=GenBank:WP_086163362.1;Name=WP_086163362.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348145.1;locus_tag=D5F92_RS09050;product=HAD-IIB family hydrolase;protein_id=WP_086163362.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 48966 49625 . + . ID=gene-D5F92_RS09055;Name=D5F92_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09055;old_locus_tag=D5F92_09070 NZ_QYTJ01000046.1 Protein Homology CDS 48966 49625 . + 0 ID=cds-WP_016502922.1;Parent=gene-D5F92_RS09055;Dbxref=GenBank:WP_016502922.1;Name=WP_016502922.1;Ontology_term=GO:0006307;gbkey=CDS;go_process=DNA alkylation repair|0006307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362921.1;locus_tag=D5F92_RS09055;product=DNA alkylation repair protein;protein_id=WP_016502922.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 49698 50192 . + . ID=gene-D5F92_RS09060;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=D5F92_RS09060;old_locus_tag=D5F92_09075 NZ_QYTJ01000046.1 Protein Homology CDS 49698 50192 . + 0 ID=cds-WP_000206525.1;Parent=gene-D5F92_RS09060;Dbxref=GenBank:WP_000206525.1;Name=WP_000206525.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206548.1;locus_tag=D5F92_RS09060;product=thiol peroxidase;protein_id=WP_000206525.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 50268 50801 . - . ID=gene-D5F92_RS09065;Name=D5F92_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09065;old_locus_tag=D5F92_09080 NZ_QYTJ01000046.1 Protein Homology CDS 50268 50801 . - 0 ID=cds-WP_086163360.1;Parent=gene-D5F92_RS09065;Dbxref=GenBank:WP_086163360.1;Name=WP_086163360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768380.1;locus_tag=D5F92_RS09065;product=DUF3278 domain-containing protein;protein_id=WP_086163360.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 50901 51140 . - . ID=gene-D5F92_RS09070;Name=D5F92_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09070;old_locus_tag=D5F92_09085 NZ_QYTJ01000046.1 Protein Homology CDS 50901 51140 . - 0 ID=cds-WP_001931014.1;Parent=gene-D5F92_RS09070;Dbxref=GenBank:WP_001931014.1;Name=WP_001931014.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001869992.1;locus_tag=D5F92_RS09070;product=helix-turn-helix transcriptional regulator;protein_id=WP_001931014.1;transl_table=11 NZ_QYTJ01000046.1 RefSeq gene 51295 52578 . - . ID=gene-D5F92_RS09075;Name=D5F92_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09075;old_locus_tag=D5F92_09090 NZ_QYTJ01000046.1 Protein Homology CDS 51295 52578 . - 0 ID=cds-WP_180383576.1;Parent=gene-D5F92_RS09075;Dbxref=GenBank:WP_180383576.1;Name=WP_180383576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644904.1;locus_tag=D5F92_RS09075;product=kinase;protein_id=WP_180383576.1;transl_table=11 ##sequence-region NZ_QYTJ01000047.1 1 30957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000047.1 RefSeq region 1 30957 . + . ID=NZ_QYTJ01000047.1:1..30957;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000047.1 RefSeq pseudogene 20 1318 . + . ID=gene-D5F92_RS09080;Name=D5F92_RS09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09080;old_locus_tag=D5F92_09095;partial=true;pseudo=true;start_range=.,20 NZ_QYTJ01000047.1 Protein Homology CDS 20 1318 . + 0 ID=cds-D5F92_RS09080;Parent=gene-D5F92_RS09080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154428.1;locus_tag=D5F92_RS09080;partial=true;product=YfhO family protein;pseudo=true;start_range=.,20;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 1386 1459 . - . ID=gene-D5F92_RS09085;Name=D5F92_RS09085;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09085;old_locus_tag=D5F92_09100 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 1386 1459 . - . ID=rna-D5F92_RS09085;Parent=gene-D5F92_RS09085;anticodon=(pos:complement(1423..1425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09085;product=tRNA-Asn NZ_QYTJ01000047.1 tRNAscan-SE exon 1386 1459 . - . ID=exon-D5F92_RS09085-1;Parent=rna-D5F92_RS09085;anticodon=(pos:complement(1423..1425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09085;product=tRNA-Asn NZ_QYTJ01000047.1 RefSeq gene 1489 1560 . - . ID=gene-D5F92_RS09090;Name=D5F92_RS09090;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09090;old_locus_tag=D5F92_09105 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 1489 1560 . - . ID=rna-D5F92_RS09090;Parent=gene-D5F92_RS09090;anticodon=(pos:complement(1525..1527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09090;product=tRNA-Glu NZ_QYTJ01000047.1 tRNAscan-SE exon 1489 1560 . - . ID=exon-D5F92_RS09090-1;Parent=rna-D5F92_RS09090;anticodon=(pos:complement(1525..1527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09090;product=tRNA-Glu NZ_QYTJ01000047.1 RefSeq gene 1752 1825 . + . ID=gene-D5F92_RS09095;Name=D5F92_RS09095;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09095;old_locus_tag=D5F92_09110 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 1752 1825 . + . ID=rna-D5F92_RS09095;Parent=gene-D5F92_RS09095;anticodon=(pos:1786..1788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09095;product=tRNA-Arg NZ_QYTJ01000047.1 tRNAscan-SE exon 1752 1825 . + . ID=exon-D5F92_RS09095-1;Parent=rna-D5F92_RS09095;anticodon=(pos:1786..1788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09095;product=tRNA-Arg NZ_QYTJ01000047.1 RefSeq gene 1898 2377 . - . ID=gene-D5F92_RS09100;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=D5F92_RS09100;old_locus_tag=D5F92_09115 NZ_QYTJ01000047.1 Protein Homology CDS 1898 2377 . - 0 ID=cds-WP_000768336.1;Parent=gene-D5F92_RS09100;Dbxref=GenBank:WP_000768336.1;Name=WP_000768336.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768335.1;locus_tag=D5F92_RS09100;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000768336.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 2578 3807 . + . ID=gene-D5F92_RS09105;Name=D5F92_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09105;old_locus_tag=D5F92_09120 NZ_QYTJ01000047.1 Protein Homology CDS 2578 3807 . + 0 ID=cds-WP_016503362.1;Parent=gene-D5F92_RS09105;Dbxref=GenBank:WP_016503362.1;Name=WP_016503362.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650333.1;locus_tag=D5F92_RS09105;product=S1C family serine protease;protein_id=WP_016503362.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 3905 4678 . + . ID=gene-D5F92_RS09110;Name=D5F92_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09110;old_locus_tag=D5F92_09125 NZ_QYTJ01000047.1 Protein Homology CDS 3905 4678 . + 0 ID=cds-WP_016503363.1;Parent=gene-D5F92_RS09110;Dbxref=GenBank:WP_016503363.1;Name=WP_016503363.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000456088.1;locus_tag=D5F92_RS09110;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_016503363.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 4887 6248 . + . ID=gene-D5F92_RS09115;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=D5F92_RS09115;old_locus_tag=D5F92_09130 NZ_QYTJ01000047.1 Protein Homology CDS 4887 6248 . + 0 ID=cds-WP_086163171.1;Parent=gene-D5F92_RS09115;Dbxref=GenBank:WP_086163171.1;Name=WP_086163171.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657571.1;locus_tag=D5F92_RS09115;product=chromosomal replication initiator protein DnaA;protein_id=WP_086163171.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 6403 7539 . + . ID=gene-D5F92_RS09120;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=D5F92_RS09120;old_locus_tag=D5F92_09135 NZ_QYTJ01000047.1 Protein Homology CDS 6403 7539 . + 0 ID=cds-WP_016502364.1;Parent=gene-D5F92_RS09120;Dbxref=GenBank:WP_016502364.1;Name=WP_016502364.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262647.1;locus_tag=D5F92_RS09120;product=DNA polymerase III subunit beta;protein_id=WP_016502364.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 7597 8490 . + . ID=gene-D5F92_RS09125;Name=D5F92_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09125;old_locus_tag=D5F92_09140 NZ_QYTJ01000047.1 Protein Homology CDS 7597 8490 . + 0 ID=cds-WP_180383419.1;Parent=gene-D5F92_RS09125;Dbxref=GenBank:WP_180383419.1;Name=WP_180383419.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987440.1;locus_tag=D5F92_RS09125;product=diacylglycerol/lipid kinase family protein;protein_id=WP_180383419.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 8500 8697 . + . ID=gene-D5F92_RS09130;Name=D5F92_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09130;old_locus_tag=D5F92_09145 NZ_QYTJ01000047.1 Protein Homology CDS 8500 8697 . + 0 ID=cds-WP_000285199.1;Parent=gene-D5F92_RS09130;Dbxref=GenBank:WP_000285199.1;Name=WP_000285199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048966.1;locus_tag=D5F92_RS09130;product=DUF951 domain-containing protein;protein_id=WP_000285199.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 8865 9017 . + . ID=gene-D5F92_RS09135;Name=D5F92_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09135;old_locus_tag=D5F92_09150 NZ_QYTJ01000047.1 Protein Homology CDS 8865 9017 . + 0 ID=cds-WP_071659936.1;Parent=gene-D5F92_RS09135;Dbxref=GenBank:WP_071659936.1;Name=WP_071659936.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369335.1;locus_tag=D5F92_RS09135;product=helix-turn-helix domain-containing protein;protein_id=WP_071659936.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 9261 10376 . + . ID=gene-D5F92_RS09140;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=D5F92_RS09140;old_locus_tag=D5F92_09155 NZ_QYTJ01000047.1 Protein Homology CDS 9261 10376 . + 0 ID=cds-WP_001218686.1;Parent=gene-D5F92_RS09140;Dbxref=GenBank:WP_001218686.1;Name=WP_001218686.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=D5F92_RS09140;product=redox-regulated ATPase YchF;protein_id=WP_001218686.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 10460 11035 . + . ID=gene-D5F92_RS09145;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=D5F92_RS09145;old_locus_tag=D5F92_09160 NZ_QYTJ01000047.1 Protein Homology CDS 10460 11035 . + 0 ID=cds-WP_000240202.1;Parent=gene-D5F92_RS09145;Dbxref=GenBank:WP_000240202.1;Name=WP_000240202.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240196.1;locus_tag=D5F92_RS09145;product=aminoacyl-tRNA hydrolase;protein_id=WP_000240202.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 11032 14529 . + . ID=gene-D5F92_RS09150;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=D5F92_RS09150;old_locus_tag=D5F92_09165 NZ_QYTJ01000047.1 Protein Homology CDS 11032 14529 . + 0 ID=cds-WP_016502366.1;Parent=gene-D5F92_RS09150;Dbxref=GenBank:WP_016502366.1;Name=WP_016502366.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021186.1;locus_tag=D5F92_RS09150;product=transcription-repair coupling factor;protein_id=WP_016502366.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 14820 15092 . + . ID=gene-D5F92_RS09160;Name=D5F92_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09160;old_locus_tag=D5F92_09175 NZ_QYTJ01000047.1 Protein Homology CDS 14820 15092 . + 0 ID=cds-WP_001234967.1;Parent=gene-D5F92_RS09160;Dbxref=GenBank:WP_001234967.1;Name=WP_001234967.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234967.1;locus_tag=D5F92_RS09160;product=RNA-binding S4 domain-containing protein;protein_id=WP_001234967.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 15079 15450 . + . ID=gene-D5F92_RS09165;Name=D5F92_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09165;old_locus_tag=D5F92_09180 NZ_QYTJ01000047.1 Protein Homology CDS 15079 15450 . + 0 ID=cds-WP_000042845.1;Parent=gene-D5F92_RS09165;Dbxref=GenBank:WP_000042845.1;Name=WP_000042845.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042845.1;locus_tag=D5F92_RS09165;product=septum formation initiator family protein;protein_id=WP_000042845.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 15453 15587 . + . ID=gene-D5F92_RS09170;Name=D5F92_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09170;old_locus_tag=D5F92_09185 NZ_QYTJ01000047.1 Protein Homology CDS 15453 15587 . + 0 ID=cds-WP_001061058.1;Parent=gene-D5F92_RS09170;Dbxref=GenBank:WP_001061058.1;Name=WP_001061058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061058.1;locus_tag=D5F92_RS09170;product=SP_0009 family protein;protein_id=WP_001061058.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 15587 16873 . + . ID=gene-D5F92_RS09175;Name=D5F92_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09175;old_locus_tag=D5F92_09190 NZ_QYTJ01000047.1 Protein Homology CDS 15587 16873 . + 0 ID=cds-WP_000757205.1;Parent=gene-D5F92_RS09175;Dbxref=GenBank:WP_000757205.1;Name=WP_000757205.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757202.1;locus_tag=D5F92_RS09175;product=serine hydrolase;protein_id=WP_000757205.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 16875 18149 . + . ID=gene-D5F92_RS09180;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=D5F92_RS09180;old_locus_tag=D5F92_09195 NZ_QYTJ01000047.1 Protein Homology CDS 16875 18149 . + 0 ID=cds-WP_016502367.1;Parent=gene-D5F92_RS09180;Dbxref=GenBank:WP_016502367.1;Name=WP_016502367.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058263.1;locus_tag=D5F92_RS09180;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_016502367.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 18154 18696 . + . ID=gene-D5F92_RS09185;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=D5F92_RS09185;old_locus_tag=D5F92_09200 NZ_QYTJ01000047.1 Protein Homology CDS 18154 18696 . + 0 ID=cds-WP_000892188.1;Parent=gene-D5F92_RS09185;Dbxref=GenBank:WP_000892188.1;Name=WP_000892188.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961310.1;locus_tag=D5F92_RS09185;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000892188.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 18719 20695 . + . ID=gene-D5F92_RS09190;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=D5F92_RS09190;old_locus_tag=D5F92_09205 NZ_QYTJ01000047.1 Protein Homology CDS 18719 20695 . + 0 ID=cds-WP_000794525.1;Parent=gene-D5F92_RS09190;Dbxref=GenBank:WP_000794525.1;Name=WP_000794525.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480147.1;locus_tag=D5F92_RS09190;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_000794525.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 21187 22735 . + . ID=gene-D5F92_RS09195;Name=D5F92_RS09195;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS09195;old_locus_tag=D5F92_09210 NZ_QYTJ01000047.1 cmsearch rRNA 21187 22735 . + . ID=rna-D5F92_RS09195;Parent=gene-D5F92_RS09195;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09195;product=16S ribosomal RNA NZ_QYTJ01000047.1 cmsearch exon 21187 22735 . + . ID=exon-D5F92_RS09195-1;Parent=rna-D5F92_RS09195;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09195;product=16S ribosomal RNA NZ_QYTJ01000047.1 RefSeq gene 22790 22862 . + . ID=gene-D5F92_RS09200;Name=D5F92_RS09200;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09200;old_locus_tag=D5F92_09215 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 22790 22862 . + . ID=rna-D5F92_RS09200;Parent=gene-D5F92_RS09200;anticodon=(pos:22823..22825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09200;product=tRNA-Ala NZ_QYTJ01000047.1 tRNAscan-SE exon 22790 22862 . + . ID=exon-D5F92_RS09200-1;Parent=rna-D5F92_RS09200;anticodon=(pos:22823..22825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09200;product=tRNA-Ala NZ_QYTJ01000047.1 RefSeq gene 23017 25919 . + . ID=gene-D5F92_RS09205;Name=D5F92_RS09205;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS09205;old_locus_tag=D5F92_09220 NZ_QYTJ01000047.1 cmsearch rRNA 23017 25919 . + . ID=rna-D5F92_RS09205;Parent=gene-D5F92_RS09205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09205;product=23S ribosomal RNA NZ_QYTJ01000047.1 cmsearch exon 23017 25919 . + . ID=exon-D5F92_RS09205-1;Parent=rna-D5F92_RS09205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09205;product=23S ribosomal RNA NZ_QYTJ01000047.1 RefSeq gene 25994 26109 . + . ID=gene-D5F92_RS09210;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS09210;old_locus_tag=D5F92_09225 NZ_QYTJ01000047.1 cmsearch rRNA 25994 26109 . + . ID=rna-D5F92_RS09210;Parent=gene-D5F92_RS09210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09210;product=5S ribosomal RNA NZ_QYTJ01000047.1 cmsearch exon 25994 26109 . + . ID=exon-D5F92_RS09210-1;Parent=rna-D5F92_RS09210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09210;product=5S ribosomal RNA NZ_QYTJ01000047.1 RefSeq gene 26113 26185 . + . ID=gene-D5F92_RS09215;Name=D5F92_RS09215;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09215;old_locus_tag=D5F92_09230 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 26113 26185 . + . ID=rna-D5F92_RS09215;Parent=gene-D5F92_RS09215;anticodon=(pos:26146..26148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09215;product=tRNA-Val NZ_QYTJ01000047.1 tRNAscan-SE exon 26113 26185 . + . ID=exon-D5F92_RS09215-1;Parent=rna-D5F92_RS09215;anticodon=(pos:26146..26148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09215;product=tRNA-Val NZ_QYTJ01000047.1 RefSeq gene 26191 26261 . + . ID=gene-D5F92_RS09220;Name=D5F92_RS09220;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09220;old_locus_tag=D5F92_09235 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 26191 26261 . + . ID=rna-D5F92_RS09220;Parent=gene-D5F92_RS09220;anticodon=(pos:26223..26225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09220;product=tRNA-Gly NZ_QYTJ01000047.1 tRNAscan-SE exon 26191 26261 . + . ID=exon-D5F92_RS09220-1;Parent=rna-D5F92_RS09220;anticodon=(pos:26223..26225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09220;product=tRNA-Gly NZ_QYTJ01000047.1 RefSeq gene 26298 26371 . + . ID=gene-D5F92_RS09225;Name=D5F92_RS09225;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09225;old_locus_tag=D5F92_09240 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 26298 26371 . + . ID=rna-D5F92_RS09225;Parent=gene-D5F92_RS09225;anticodon=(pos:26332..26334);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09225;product=tRNA-Ile NZ_QYTJ01000047.1 tRNAscan-SE exon 26298 26371 . + . ID=exon-D5F92_RS09225-1;Parent=rna-D5F92_RS09225;anticodon=(pos:26332..26334);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09225;product=tRNA-Ile NZ_QYTJ01000047.1 RefSeq gene 26382 26453 . + . ID=gene-D5F92_RS09230;Name=D5F92_RS09230;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09230;old_locus_tag=D5F92_09245 NZ_QYTJ01000047.1 tRNAscan-SE tRNA 26382 26453 . + . ID=rna-D5F92_RS09230;Parent=gene-D5F92_RS09230;anticodon=(pos:26415..26417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09230;product=tRNA-Glu NZ_QYTJ01000047.1 tRNAscan-SE exon 26382 26453 . + . ID=exon-D5F92_RS09230-1;Parent=rna-D5F92_RS09230;anticodon=(pos:26415..26417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09230;product=tRNA-Glu NZ_QYTJ01000047.1 RefSeq gene 26568 27101 . - . ID=gene-D5F92_RS09235;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=D5F92_RS09235;old_locus_tag=D5F92_09250 NZ_QYTJ01000047.1 Protein Homology CDS 26568 27101 . - 0 ID=cds-WP_001239184.1;Parent=gene-D5F92_RS09235;Dbxref=GenBank:WP_001239184.1;Name=WP_001239184.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949762.1;locus_tag=D5F92_RS09235;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_001239184.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 27185 27961 . - . ID=gene-D5F92_RS09240;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=D5F92_RS09240;old_locus_tag=D5F92_09255 NZ_QYTJ01000047.1 Protein Homology CDS 27185 27961 . - 0 ID=cds-WP_000704975.1;Parent=gene-D5F92_RS09240;Dbxref=GenBank:WP_000704975.1;Name=WP_000704975.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704976.1;locus_tag=D5F92_RS09240;product=recombination regulator RecX;protein_id=WP_000704975.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 28060 29415 . + . ID=gene-D5F92_RS09245;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=D5F92_RS09245;old_locus_tag=D5F92_09260 NZ_QYTJ01000047.1 Protein Homology CDS 28060 29415 . + 0 ID=cds-WP_016502559.1;Parent=gene-D5F92_RS09245;Dbxref=GenBank:WP_016502559.1;Name=WP_016502559.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284934.1;locus_tag=D5F92_RS09245;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_016502559.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 29684 30448 . + . ID=gene-D5F92_RS09250;Name=D5F92_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09250;old_locus_tag=D5F92_09265 NZ_QYTJ01000047.1 Protein Homology CDS 29684 30448 . + 0 ID=cds-WP_000586351.1;Parent=gene-D5F92_RS09250;Dbxref=GenBank:WP_000586351.1;Name=WP_000586351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771410.1;locus_tag=D5F92_RS09250;product=nucleoside phosphorylase;protein_id=WP_000586351.1;transl_table=11 NZ_QYTJ01000047.1 RefSeq gene 30482 30910 . + . ID=gene-D5F92_RS09255;Name=D5F92_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09255;old_locus_tag=D5F92_09270 NZ_QYTJ01000047.1 Protein Homology CDS 30482 30910 . + 0 ID=cds-WP_017647004.1;Parent=gene-D5F92_RS09255;Dbxref=GenBank:WP_017647004.1;Name=WP_017647004.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768361.1;locus_tag=D5F92_RS09255;product=GNAT family N-acetyltransferase;protein_id=WP_017647004.1;transl_table=11 ##sequence-region NZ_QYTJ01000048.1 1 1588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000048.1 RefSeq region 1 1588 . + . ID=NZ_QYTJ01000048.1:1..1588;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000048.1 RefSeq gene 1 464 . + . ID=gene-D5F92_RS09260;Name=D5F92_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09260;old_locus_tag=D5F92_09275;partial=true;start_range=.,1 NZ_QYTJ01000048.1 Protein Homology CDS 1 464 . + 2 ID=cds-WP_142996896.1;Parent=gene-D5F92_RS09260;Dbxref=GenBank:WP_142996896.1;Name=WP_142996896.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS09260;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_142996896.1;start_range=.,1;transl_table=11 NZ_QYTJ01000048.1 RefSeq pseudogene 498 644 . - . ID=gene-D5F92_RS09265;Name=D5F92_RS09265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09265;old_locus_tag=D5F92_09280;partial=true;pseudo=true;start_range=.,498 NZ_QYTJ01000048.1 Protein Homology CDS 498 644 . - 0 ID=cds-D5F92_RS09265;Parent=gene-D5F92_RS09265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000752178.1;locus_tag=D5F92_RS09265;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,498;transl_table=11 NZ_QYTJ01000048.1 RefSeq pseudogene 891 1172 . - . ID=gene-D5F92_RS09270;Name=D5F92_RS09270;end_range=1172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09270;old_locus_tag=D5F92_09285;partial=true;pseudo=true NZ_QYTJ01000048.1 Protein Homology CDS 891 1172 . - 0 ID=cds-D5F92_RS09270;Parent=gene-D5F92_RS09270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643060.1;locus_tag=D5F92_RS09270;partial=true;product=glycosyl transferase family 2;pseudo=true;transl_table=11 NZ_QYTJ01000048.1 RefSeq gene 1213 1588 . - . ID=gene-D5F92_RS09275;Name=D5F92_RS09275;end_range=1588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09275;old_locus_tag=D5F92_09290;partial=true NZ_QYTJ01000048.1 Protein Homology CDS 1213 1588 . - 1 ID=cds-WP_142996897.1;Parent=gene-D5F92_RS09275;Dbxref=GenBank:WP_142996897.1;Name=WP_142996897.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=1588,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS09275;partial=true;product=integrase core domain-containing protein;protein_id=WP_142996897.1;transl_table=11 ##sequence-region NZ_QYTJ01000049.1 1 21003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000049.1 RefSeq region 1 21003 . + . ID=NZ_QYTJ01000049.1:1..21003;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000049.1 RefSeq gene 1 386 . + . ID=gene-D5F92_RS09280;Name=D5F92_RS09280;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS09280;old_locus_tag=D5F92_09295;partial=true;start_range=.,1 NZ_QYTJ01000049.1 cmsearch rRNA 1 386 . + . ID=rna-D5F92_RS09280;Parent=gene-D5F92_RS09280;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09280;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000049.1 cmsearch exon 1 386 . + . ID=exon-D5F92_RS09280-1;Parent=rna-D5F92_RS09280;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09280;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_QYTJ01000049.1 RefSeq gene 461 576 . + . ID=gene-D5F92_RS09285;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS09285;old_locus_tag=D5F92_09300 NZ_QYTJ01000049.1 cmsearch rRNA 461 576 . + . ID=rna-D5F92_RS09285;Parent=gene-D5F92_RS09285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09285;product=5S ribosomal RNA NZ_QYTJ01000049.1 cmsearch exon 461 576 . + . ID=exon-D5F92_RS09285-1;Parent=rna-D5F92_RS09285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS09285;product=5S ribosomal RNA NZ_QYTJ01000049.1 RefSeq gene 582 655 . + . ID=gene-D5F92_RS09290;Name=D5F92_RS09290;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS09290;old_locus_tag=D5F92_09305 NZ_QYTJ01000049.1 tRNAscan-SE tRNA 582 655 . + . ID=rna-D5F92_RS09290;Parent=gene-D5F92_RS09290;anticodon=(pos:616..618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09290;product=tRNA-Asn NZ_QYTJ01000049.1 tRNAscan-SE exon 582 655 . + . ID=exon-D5F92_RS09290-1;Parent=rna-D5F92_RS09290;anticodon=(pos:616..618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS09290;product=tRNA-Asn NZ_QYTJ01000049.1 RefSeq gene 872 2224 . - . ID=gene-D5F92_RS09295;Name=D5F92_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09295;old_locus_tag=D5F92_09310 NZ_QYTJ01000049.1 Protein Homology CDS 872 2224 . - 0 ID=cds-WP_086163226.1;Parent=gene-D5F92_RS09295;Dbxref=GenBank:WP_086163226.1;Name=WP_086163226.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480318.1;locus_tag=D5F92_RS09295;product=aspartate kinase;protein_id=WP_086163226.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 2318 2968 . + . ID=gene-D5F92_RS09300;Name=D5F92_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09300;old_locus_tag=D5F92_09315 NZ_QYTJ01000049.1 Protein Homology CDS 2318 2968 . + 0 ID=cds-WP_000335411.1;Parent=gene-D5F92_RS09300;Dbxref=GenBank:WP_000335411.1;Name=WP_000335411.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001900118.1;locus_tag=D5F92_RS09300;product=HAD family hydrolase;protein_id=WP_000335411.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 3105 3896 . + . ID=gene-D5F92_RS09310;Name=D5F92_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09310;old_locus_tag=D5F92_09325 NZ_QYTJ01000049.1 Protein Homology CDS 3105 3896 . + 0 ID=cds-WP_016502522.1;Parent=gene-D5F92_RS09310;Dbxref=GenBank:WP_016502522.1;Name=WP_016502522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667362.1;locus_tag=D5F92_RS09310;product=enoyl-CoA hydratase;protein_id=WP_016502522.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 3992 4426 . + . ID=gene-D5F92_RS09315;Name=fabT;gbkey=Gene;gene=fabT;gene_biotype=protein_coding;locus_tag=D5F92_RS09315;old_locus_tag=D5F92_09330 NZ_QYTJ01000049.1 Protein Homology CDS 3992 4426 . + 0 ID=cds-WP_000455488.1;Parent=gene-D5F92_RS09315;Dbxref=GenBank:WP_000455488.1;Name=WP_000455488.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fabT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455488.1;locus_tag=D5F92_RS09315;product=fatty acid biosynthesis transcriptional regulator FabT;protein_id=WP_000455488.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 4426 5397 . + . ID=gene-D5F92_RS09320;Name=D5F92_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09320;old_locus_tag=D5F92_09335 NZ_QYTJ01000049.1 Protein Homology CDS 4426 5397 . + 0 ID=cds-WP_000230690.1;Parent=gene-D5F92_RS09320;Dbxref=GenBank:WP_000230690.1;Name=WP_000230690.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230695.1;locus_tag=D5F92_RS09320;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000230690.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 5455 5679 . + . ID=gene-D5F92_RS09325;Name=D5F92_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09325;old_locus_tag=D5F92_09340 NZ_QYTJ01000049.1 Protein Homology CDS 5455 5679 . + 0 ID=cds-WP_000257836.1;Parent=gene-D5F92_RS09325;Dbxref=GenBank:WP_000257836.1;Name=WP_000257836.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938891.1;locus_tag=D5F92_RS09325;product=acyl carrier protein;protein_id=WP_000257836.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 5833 6792 . + . ID=gene-D5F92_RS09330;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=D5F92_RS09330;old_locus_tag=D5F92_09345 NZ_QYTJ01000049.1 Protein Homology CDS 5833 6792 . + 0 ID=cds-WP_016502524.1;Parent=gene-D5F92_RS09330;Dbxref=GenBank:WP_016502524.1;Name=WP_016502524.1;Ontology_term=GO:0018580;gbkey=CDS;gene=fabK;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857470.1;locus_tag=D5F92_RS09330;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=WP_016502524.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 6812 7738 . + . ID=gene-D5F92_RS09335;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=D5F92_RS09335;old_locus_tag=D5F92_09350 NZ_QYTJ01000049.1 Protein Homology CDS 6812 7738 . + 0 ID=cds-WP_016502525.1;Parent=gene-D5F92_RS09335;Dbxref=GenBank:WP_016502525.1;Name=WP_016502525.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058362.1;locus_tag=D5F92_RS09335;product=ACP S-malonyltransferase;protein_id=WP_016502525.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 7747 8481 . + . ID=gene-D5F92_RS09340;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=D5F92_RS09340;old_locus_tag=D5F92_09355 NZ_QYTJ01000049.1 Protein Homology CDS 7747 8481 . + 0 ID=cds-WP_016502526.1;Parent=gene-D5F92_RS09340;Dbxref=GenBank:WP_016502526.1;Name=WP_016502526.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771521.1;locus_tag=D5F92_RS09340;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_016502526.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 8497 9729 . + . ID=gene-D5F92_RS09345;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=D5F92_RS09345;old_locus_tag=D5F92_09360 NZ_QYTJ01000049.1 Protein Homology CDS 8497 9729 . + 0 ID=cds-WP_016502527.1;Parent=gene-D5F92_RS09345;Dbxref=GenBank:WP_016502527.1;Name=WP_016502527.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012679081.1;locus_tag=D5F92_RS09345;product=beta-ketoacyl-ACP synthase II;protein_id=WP_016502527.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 9731 10231 . + . ID=gene-D5F92_RS09350;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=D5F92_RS09350;old_locus_tag=D5F92_09365 NZ_QYTJ01000049.1 Protein Homology CDS 9731 10231 . + 0 ID=cds-WP_000354298.1;Parent=gene-D5F92_RS09350;Dbxref=GenBank:WP_000354298.1;Name=WP_000354298.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354298.1;locus_tag=D5F92_RS09350;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354298.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 10228 10650 . + . ID=gene-D5F92_RS09355;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=D5F92_RS09355;old_locus_tag=D5F92_09370 NZ_QYTJ01000049.1 Protein Homology CDS 10228 10650 . + 0 ID=cds-WP_000565430.1;Parent=gene-D5F92_RS09355;Dbxref=GenBank:WP_000565430.1;Name=WP_000565430.1;Ontology_term=GO:0006633,GO:0016836,GO:0019171;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA,(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565430.1;locus_tag=D5F92_RS09355;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000565430.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 10688 12058 . + . ID=gene-D5F92_RS09360;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=D5F92_RS09360;old_locus_tag=D5F92_09375 NZ_QYTJ01000049.1 Protein Homology CDS 10688 12058 . + 0 ID=cds-WP_016502528.1;Parent=gene-D5F92_RS09360;Dbxref=GenBank:WP_016502528.1;Name=WP_016502528.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473508.1;locus_tag=D5F92_RS09360;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_016502528.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 12067 12942 . + . ID=gene-D5F92_RS09365;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=D5F92_RS09365;old_locus_tag=D5F92_09380 NZ_QYTJ01000049.1 Protein Homology CDS 12067 12942 . + 0 ID=cds-WP_016502529.1;Parent=gene-D5F92_RS09365;Dbxref=GenBank:WP_016502529.1;Name=WP_016502529.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480323.1;locus_tag=D5F92_RS09365;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_016502529.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 12935 13708 . + . ID=gene-D5F92_RS09370;Name=D5F92_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09370;old_locus_tag=D5F92_09385 NZ_QYTJ01000049.1 Protein Homology CDS 12935 13708 . + 0 ID=cds-WP_001058273.1;Parent=gene-D5F92_RS09370;Dbxref=GenBank:WP_001058273.1;Name=WP_001058273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058273.1;locus_tag=D5F92_RS09370;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_001058273.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 14175 14807 . + . ID=gene-D5F92_RS09375;Name=D5F92_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09375;old_locus_tag=D5F92_09390 NZ_QYTJ01000049.1 Protein Homology CDS 14175 14807 . + 0 ID=cds-WP_124749539.1;Parent=gene-D5F92_RS09375;Dbxref=GenBank:WP_124749539.1;Name=WP_124749539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284161.1;locus_tag=D5F92_RS09375;product=HI_0552 family protein;protein_id=WP_124749539.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 14853 16130 . - . ID=gene-D5F92_RS09380;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=D5F92_RS09380;old_locus_tag=D5F92_09395 NZ_QYTJ01000049.1 Protein Homology CDS 14853 16130 . - 0 ID=cds-WP_000886190.1;Parent=gene-D5F92_RS09380;Dbxref=GenBank:WP_000886190.1;Name=WP_000886190.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886194.1;locus_tag=D5F92_RS09380;product=serine--tRNA ligase;protein_id=WP_000886190.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 16427 17488 . + . ID=gene-D5F92_RS09385;Name=D5F92_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09385;old_locus_tag=D5F92_09400 NZ_QYTJ01000049.1 Protein Homology CDS 16427 17488 . + 0 ID=cds-WP_124749537.1;Parent=gene-D5F92_RS09385;Dbxref=GenBank:WP_124749537.1;Name=WP_124749537.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417627.1;locus_tag=D5F92_RS09385;product=acyltransferase;protein_id=WP_124749537.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 17526 17888 . - . ID=gene-D5F92_RS09390;Name=D5F92_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09390;old_locus_tag=D5F92_09405 NZ_QYTJ01000049.1 Protein Homology CDS 17526 17888 . - 0 ID=cds-WP_000079341.1;Parent=gene-D5F92_RS09390;Dbxref=GenBank:WP_000079341.1;Name=WP_000079341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058367.1;locus_tag=D5F92_RS09390;product=DUF956 family protein;protein_id=WP_000079341.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 18007 18918 . - . ID=gene-D5F92_RS09395;Name=D5F92_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09395;old_locus_tag=D5F92_09410 NZ_QYTJ01000049.1 Protein Homology CDS 18007 18918 . - 0 ID=cds-WP_000139227.1;Parent=gene-D5F92_RS09395;Dbxref=GenBank:WP_000139227.1;Name=WP_000139227.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139230.1;locus_tag=D5F92_RS09395;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000139227.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 18933 19745 . - . ID=gene-D5F92_RS09400;Name=D5F92_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09400;old_locus_tag=D5F92_09415 NZ_QYTJ01000049.1 Protein Homology CDS 18933 19745 . - 0 ID=cds-WP_000763693.1;Parent=gene-D5F92_RS09400;Dbxref=GenBank:WP_000763693.1;Name=WP_000763693.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763694.1;locus_tag=D5F92_RS09400;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_000763693.1;transl_table=11 NZ_QYTJ01000049.1 RefSeq gene 19778 20788 . - . ID=gene-D5F92_RS09405;Name=D5F92_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09405;old_locus_tag=D5F92_09420 NZ_QYTJ01000049.1 Protein Homology CDS 19778 20788 . - 0 ID=cds-WP_000511108.1;Parent=gene-D5F92_RS09405;Dbxref=GenBank:WP_000511108.1;Name=WP_000511108.1;Ontology_term=GO:0009401,GO:0008982,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044984.1;locus_tag=D5F92_RS09405;product=PTS sugar transporter subunit IIB;protein_id=WP_000511108.1;transl_table=11 ##sequence-region NZ_QYTJ01000005.1 1 1145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000005.1 RefSeq region 1 1145 . + . ID=NZ_QYTJ01000005.1:1..1145;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000005.1 RefSeq pseudogene 92 1111 . - . ID=gene-D5F92_RS00930;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=D5F92_RS00930;old_locus_tag=D5F92_00935;pseudo=true NZ_QYTJ01000005.1 Protein Homology CDS 92 1111 . - 0 ID=cds-D5F92_RS00930;Parent=gene-D5F92_RS00930;Note=internal stop;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275291.1;locus_tag=D5F92_RS00930;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000050.1 1 8503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000050.1 RefSeq region 1 8503 . + . ID=NZ_QYTJ01000050.1:1..8503;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000050.1 RefSeq gene 1 748 . - . ID=gene-D5F92_RS09415;Name=D5F92_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09415;old_locus_tag=D5F92_09430;partial=true;start_range=.,1 NZ_QYTJ01000050.1 Protein Homology CDS 1 748 . - 0 ID=cds-WP_124785522.1;Parent=gene-D5F92_RS09415;Dbxref=GenBank:WP_124785522.1;Name=WP_124785522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645320.1;locus_tag=D5F92_RS09415;partial=true;product=ABC transporter (permease);protein_id=WP_124785522.1;start_range=.,1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 760 1458 . - . ID=gene-D5F92_RS09420;Name=D5F92_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09420;old_locus_tag=D5F92_09435 NZ_QYTJ01000050.1 Protein Homology CDS 760 1458 . - 0 ID=cds-WP_000192683.1;Parent=gene-D5F92_RS09420;Dbxref=GenBank:WP_000192683.1;Name=WP_000192683.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192687.1;locus_tag=D5F92_RS09420;product=ABC transporter ATP-binding protein;protein_id=WP_000192683.1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 1459 1827 . - . ID=gene-D5F92_RS09425;Name=D5F92_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09425;old_locus_tag=D5F92_09440 NZ_QYTJ01000050.1 Protein Homology CDS 1459 1827 . - 0 ID=cds-WP_000312256.1;Parent=gene-D5F92_RS09425;Dbxref=GenBank:WP_000312256.1;Name=WP_000312256.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312257.1;locus_tag=D5F92_RS09425;product=GntR family transcriptional regulator;protein_id=WP_000312256.1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 1972 5076 . + . ID=gene-D5F92_RS09430;Name=D5F92_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09430;old_locus_tag=D5F92_09445 NZ_QYTJ01000050.1 Protein Homology CDS 1972 5076 . + 0 ID=cds-WP_016480722.1;Parent=gene-D5F92_RS09430;Dbxref=GenBank:WP_016480722.1;Name=WP_016480722.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457960.1;locus_tag=D5F92_RS09430;product=DNA polymerase III subunit alpha;protein_id=WP_016480722.1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 5157 6179 . + . ID=gene-D5F92_RS09435;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=D5F92_RS09435;old_locus_tag=D5F92_09450 NZ_QYTJ01000050.1 Protein Homology CDS 5157 6179 . + 0 ID=cds-WP_000820831.1;Parent=gene-D5F92_RS09435;Dbxref=GenBank:WP_000820831.1;Name=WP_000820831.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767829.1;locus_tag=D5F92_RS09435;product=6-phosphofructokinase;protein_id=WP_000820831.1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 6228 7730 . + . ID=gene-D5F92_RS09440;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=D5F92_RS09440;old_locus_tag=D5F92_09455 NZ_QYTJ01000050.1 Protein Homology CDS 6228 7730 . + 0 ID=cds-WP_124749371.1;Parent=gene-D5F92_RS09440;Dbxref=GenBank:WP_124749371.1;Name=WP_124749371.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018366040.1;locus_tag=D5F92_RS09440;product=pyruvate kinase;protein_id=WP_124749371.1;transl_table=11 NZ_QYTJ01000050.1 RefSeq gene 7901 8458 . + . ID=gene-D5F92_RS09445;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F92_RS09445;old_locus_tag=D5F92_09460 NZ_QYTJ01000050.1 Protein Homology CDS 7901 8458 . + 0 ID=cds-WP_000240773.1;Parent=gene-D5F92_RS09445;Dbxref=GenBank:WP_000240773.1;Name=WP_000240773.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001931829.1;locus_tag=D5F92_RS09445;product=signal peptidase I;protein_id=WP_000240773.1;transl_table=11 ##sequence-region NZ_QYTJ01000051.1 1 22022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000051.1 RefSeq region 1 22022 . + . ID=NZ_QYTJ01000051.1:1..22022;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000051.1 RefSeq gene 236 700 . + . ID=gene-D5F92_RS09450;Name=D5F92_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09450;old_locus_tag=D5F92_09465 NZ_QYTJ01000051.1 Protein Homology CDS 236 700 . + 0 ID=cds-WP_124749386.1;Parent=gene-D5F92_RS09450;Dbxref=GenBank:WP_124749386.1;Name=WP_124749386.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482169.1;locus_tag=D5F92_RS09450;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_124749386.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 908 1984 . + . ID=gene-D5F92_RS09455;Name=D5F92_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09455;old_locus_tag=D5F92_09470 NZ_QYTJ01000051.1 Protein Homology CDS 908 1984 . + 0 ID=cds-WP_124749384.1;Parent=gene-D5F92_RS09455;Dbxref=GenBank:WP_124749384.1;Name=WP_124749384.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502892.1;locus_tag=D5F92_RS09455;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_124749384.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 2154 2492 . + . ID=gene-D5F92_RS09460;Name=D5F92_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09460;old_locus_tag=D5F92_09475 NZ_QYTJ01000051.1 Protein Homology CDS 2154 2492 . + 0 ID=cds-WP_001165746.1;Parent=gene-D5F92_RS09460;Dbxref=GenBank:WP_001165746.1;Name=WP_001165746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165748.1;locus_tag=D5F92_RS09460;product=ATP cone domain-containing protein;protein_id=WP_001165746.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 2623 4164 . + . ID=gene-D5F92_RS09465;Name=D5F92_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09465;old_locus_tag=D5F92_09480 NZ_QYTJ01000051.1 Protein Homology CDS 2623 4164 . + 0 ID=cds-WP_000025412.1;Parent=gene-D5F92_RS09465;Dbxref=GenBank:WP_000025412.1;Name=WP_000025412.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025412.1;locus_tag=D5F92_RS09465;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_000025412.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 4204 5436 . + . ID=gene-D5F92_RS09470;Name=D5F92_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09470;old_locus_tag=D5F92_09485 NZ_QYTJ01000051.1 Protein Homology CDS 4204 5436 . + 0 ID=cds-WP_016480781.1;Parent=gene-D5F92_RS09470;Dbxref=GenBank:WP_016480781.1;Name=WP_016480781.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001178658.1;locus_tag=D5F92_RS09470;product=threonine/serine ThrE exporter family protein;protein_id=WP_016480781.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 5649 6350 . + . ID=gene-D5F92_RS09475;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=D5F92_RS09475;old_locus_tag=D5F92_09490 NZ_QYTJ01000051.1 Protein Homology CDS 5649 6350 . + 0 ID=cds-WP_016480780.1;Parent=gene-D5F92_RS09475;Dbxref=GenBank:WP_016480780.1;Name=WP_016480780.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890806.1;locus_tag=D5F92_RS09475;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_016480780.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 6363 6992 . + . ID=gene-D5F92_RS09480;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=D5F92_RS09480;old_locus_tag=D5F92_09495 NZ_QYTJ01000051.1 Protein Homology CDS 6363 6992 . + 0 ID=cds-WP_124785524.1;Parent=gene-D5F92_RS09480;Dbxref=GenBank:WP_124785524.1;Name=WP_124785524.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502888.1;locus_tag=D5F92_RS09480;product=orotate phosphoribosyltransferase;protein_id=WP_124785524.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 7004 8296 . + . ID=gene-D5F92_RS09485;Name=D5F92_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09485;old_locus_tag=D5F92_09500 NZ_QYTJ01000051.1 Protein Homology CDS 7004 8296 . + 0 ID=cds-WP_016502887.1;Parent=gene-D5F92_RS09485;Dbxref=GenBank:WP_016502887.1;Name=WP_016502887.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771964.1;locus_tag=D5F92_RS09485;product=dihydroorotase;protein_id=WP_016502887.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 8461 9387 . + . ID=gene-D5F92_RS09490;Name=D5F92_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09490;old_locus_tag=D5F92_09505 NZ_QYTJ01000051.1 Protein Homology CDS 8461 9387 . + 0 ID=cds-WP_001016474.1;Parent=gene-D5F92_RS09490;Dbxref=GenBank:WP_001016474.1;Name=WP_001016474.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016475.1;locus_tag=D5F92_RS09490;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_001016474.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 9398 10474 . + . ID=gene-D5F92_RS09495;Name=D5F92_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09495;old_locus_tag=D5F92_09510 NZ_QYTJ01000051.1 Protein Homology CDS 9398 10474 . + 0 ID=cds-WP_016502886.1;Parent=gene-D5F92_RS09495;Dbxref=GenBank:WP_016502886.1;Name=WP_016502886.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826106.1;locus_tag=D5F92_RS09495;product=carbamoyl phosphate synthase small subunit;protein_id=WP_016502886.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 10505 13687 . + . ID=gene-D5F92_RS09500;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=D5F92_RS09500;old_locus_tag=D5F92_09515 NZ_QYTJ01000051.1 Protein Homology CDS 10505 13687 . + 0 ID=cds-WP_124749382.1;Parent=gene-D5F92_RS09500;Dbxref=GenBank:WP_124749382.1;Name=WP_124749382.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646011.1;locus_tag=D5F92_RS09500;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_124749382.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 13814 14137 . + . ID=gene-D5F92_RS09505;Name=D5F92_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09505;old_locus_tag=D5F92_09520 NZ_QYTJ01000051.1 Protein Homology CDS 13814 14137 . + 0 ID=cds-WP_000921240.1;Parent=gene-D5F92_RS09505;Dbxref=GenBank:WP_000921240.1;Name=WP_000921240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000921242.1;locus_tag=D5F92_RS09505;product=hypothetical protein;protein_id=WP_000921240.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 14134 14916 . + . ID=gene-D5F92_RS09510;Name=D5F92_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09510;old_locus_tag=D5F92_09525 NZ_QYTJ01000051.1 Protein Homology CDS 14134 14916 . + 0 ID=cds-WP_001883331.1;Parent=gene-D5F92_RS09510;Dbxref=GenBank:WP_001883331.1;Name=WP_001883331.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001923787.1;locus_tag=D5F92_RS09510;product=lipase family protein;protein_id=WP_001883331.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 15033 15323 . + . ID=gene-D5F92_RS09515;Name=D5F92_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09515;old_locus_tag=D5F92_09530 NZ_QYTJ01000051.1 Protein Homology CDS 15033 15323 . + 0 ID=cds-WP_000057247.1;Parent=gene-D5F92_RS09515;Dbxref=GenBank:WP_000057247.1;Name=WP_000057247.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057248.1;locus_tag=D5F92_RS09515;product=WXG100 family type VII secretion target;protein_id=WP_000057247.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 15491 15781 . + . ID=gene-D5F92_RS09520;Name=D5F92_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09520;old_locus_tag=D5F92_09535 NZ_QYTJ01000051.1 Protein Homology CDS 15491 15781 . + 0 ID=cds-WP_000057250.1;Parent=gene-D5F92_RS09520;Dbxref=GenBank:WP_000057250.1;Name=WP_000057250.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057248.1;locus_tag=D5F92_RS09520;product=WXG100 family type VII secretion target;protein_id=WP_000057250.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq pseudogene 15863 18298 . + . ID=gene-D5F92_RS09525;Name=esaA;end_range=18298,.;gbkey=Gene;gene=esaA;gene_biotype=pseudogene;locus_tag=D5F92_RS09525;old_locus_tag=D5F92_09540;partial=true;pseudo=true NZ_QYTJ01000051.1 Protein Homology CDS 15863 18298 . + 0 ID=cds-D5F92_RS09525;Parent=gene-D5F92_RS09525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=18298,.;gbkey=CDS;gene=esaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828107.1;locus_tag=D5F92_RS09525;partial=true;product=type VII secretion protein EsaA;pseudo=true;transl_table=11 NZ_QYTJ01000051.1 RefSeq pseudogene 18295 18645 . + . ID=gene-D5F92_RS09530;Name=D5F92_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09530;old_locus_tag=D5F92_09545;partial=true;pseudo=true;start_range=.,18295 NZ_QYTJ01000051.1 Protein Homology CDS 18295 18645 . + 0 ID=cds-D5F92_RS09530;Parent=gene-D5F92_RS09530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649924.1;locus_tag=D5F92_RS09530;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,18295;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 19040 19489 . + . ID=gene-D5F92_RS09535;Name=D5F92_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09535;old_locus_tag=D5F92_09550 NZ_QYTJ01000051.1 Protein Homology CDS 19040 19489 . + 0 ID=cds-WP_001867149.1;Parent=gene-D5F92_RS09535;Dbxref=GenBank:WP_001867149.1;Name=WP_001867149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001867149.1;locus_tag=D5F92_RS09535;product=hypothetical protein;protein_id=WP_001867149.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 19494 20180 . + . ID=gene-D5F92_RS09540;Name=D5F92_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09540;old_locus_tag=D5F92_09555 NZ_QYTJ01000051.1 Protein Homology CDS 19494 20180 . + 0 ID=cds-WP_375804165.1;Parent=gene-D5F92_RS09540;Dbxref=GenBank:WP_375804165.1;Name=WP_375804165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502883.1;locus_tag=D5F92_RS09540;product=hypothetical protein;protein_id=WP_375804165.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq gene 20192 20725 . + . ID=gene-D5F92_RS09550;Name=D5F92_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09550;old_locus_tag=D5F92_09565 NZ_QYTJ01000051.1 Protein Homology CDS 20192 20725 . + 0 ID=cds-WP_016502882.1;Parent=gene-D5F92_RS09550;Dbxref=GenBank:WP_016502882.1;Name=WP_016502882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526054.1;locus_tag=D5F92_RS09550;product=hypothetical protein;protein_id=WP_016502882.1;transl_table=11 NZ_QYTJ01000051.1 RefSeq pseudogene 21073 21397 . + . ID=gene-D5F92_RS09560;Name=D5F92_RS09560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09560;old_locus_tag=D5F92_09575;pseudo=true NZ_QYTJ01000051.1 Protein Homology CDS 21073 21397 . + 0 ID=cds-D5F92_RS09560;Parent=gene-D5F92_RS09560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285002.1;locus_tag=D5F92_RS09560;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000051.1 RefSeq pseudogene 21483 21742 . + . ID=gene-D5F92_RS11445;Name=D5F92_RS11445;end_range=21742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11445;old_locus_tag=D5F92_09580;partial=true;pseudo=true NZ_QYTJ01000051.1 Protein Homology CDS 21483 21742 . + 0 ID=cds-D5F92_RS11445;Parent=gene-D5F92_RS11445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814337.1;locus_tag=D5F92_RS11445;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000051.1 RefSeq pseudogene 21830 22022 . + . ID=gene-D5F92_RS09570;Name=D5F92_RS09570;end_range=22022,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09570;old_locus_tag=D5F92_09585;partial=true;pseudo=true NZ_QYTJ01000051.1 Protein Homology CDS 21830 22022 . + 0 ID=cds-D5F92_RS09570;Parent=gene-D5F92_RS09570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS09570;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000052.1 1 13364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000052.1 RefSeq region 1 13364 . + . ID=NZ_QYTJ01000052.1:1..13364;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000052.1 RefSeq gene 104 1666 . - . ID=gene-D5F92_RS09575;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=D5F92_RS09575;old_locus_tag=D5F92_09590 NZ_QYTJ01000052.1 Protein Homology CDS 104 1666 . - 0 ID=cds-WP_000129872.1;Parent=gene-D5F92_RS09575;Dbxref=GenBank:WP_000129872.1;Name=WP_000129872.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009880616.1;locus_tag=D5F92_RS09575;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000129872.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 1879 2577 . + . ID=gene-D5F92_RS09580;Name=D5F92_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09580;old_locus_tag=D5F92_09595 NZ_QYTJ01000052.1 Protein Homology CDS 1879 2577 . + 0 ID=cds-WP_000936162.1;Parent=gene-D5F92_RS09580;Dbxref=GenBank:WP_000936162.1;Name=WP_000936162.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936162.1;locus_tag=D5F92_RS09580;product=GntR family transcriptional regulator;protein_id=WP_000936162.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 2691 4025 . + . ID=gene-D5F92_RS09585;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=D5F92_RS09585;old_locus_tag=D5F92_09600 NZ_QYTJ01000052.1 Protein Homology CDS 2691 4025 . + 0 ID=cds-WP_016502848.1;Parent=gene-D5F92_RS09585;Dbxref=GenBank:WP_016502848.1;Name=WP_016502848.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083753.1;locus_tag=D5F92_RS09585;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_016502848.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 4112 4855 . + . ID=gene-D5F92_RS09590;Name=D5F92_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09590;old_locus_tag=D5F92_09605 NZ_QYTJ01000052.1 Protein Homology CDS 4112 4855 . + 0 ID=cds-WP_000291479.1;Parent=gene-D5F92_RS09590;Dbxref=GenBank:WP_000291479.1;Name=WP_000291479.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559006.1;locus_tag=D5F92_RS09590;product=GNAT family N-acetyltransferase;protein_id=WP_000291479.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 4988 5836 . + . ID=gene-D5F92_RS09595;Name=D5F92_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09595;old_locus_tag=D5F92_09610 NZ_QYTJ01000052.1 Protein Homology CDS 4988 5836 . + 0 ID=cds-WP_000694284.1;Parent=gene-D5F92_RS09595;Dbxref=GenBank:WP_000694284.1;Name=WP_000694284.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646539.1;locus_tag=D5F92_RS09595;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000694284.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 5868 6356 . - . ID=gene-D5F92_RS09600;Name=D5F92_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09600;old_locus_tag=D5F92_09615 NZ_QYTJ01000052.1 Protein Homology CDS 5868 6356 . - 0 ID=cds-WP_001140791.1;Parent=gene-D5F92_RS09600;Dbxref=GenBank:WP_001140791.1;Name=WP_001140791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140790.1;locus_tag=D5F92_RS09600;product=PASTA domain-containing protein;protein_id=WP_001140791.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 6522 7484 . + . ID=gene-D5F92_RS09605;Name=D5F92_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09605;old_locus_tag=D5F92_09620 NZ_QYTJ01000052.1 Protein Homology CDS 6522 7484 . + 0 ID=cds-WP_001253128.1;Parent=gene-D5F92_RS09605;Dbxref=GenBank:WP_001253128.1;Name=WP_001253128.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253131.1;locus_tag=D5F92_RS09605;product=S41 family peptidase;protein_id=WP_001253128.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 7510 8262 . + . ID=gene-D5F92_RS09610;Name=D5F92_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09610;old_locus_tag=D5F92_09625 NZ_QYTJ01000052.1 Protein Homology CDS 7510 8262 . + 0 ID=cds-WP_000923535.1;Parent=gene-D5F92_RS09610;Dbxref=GenBank:WP_000923535.1;Name=WP_000923535.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650232.1;locus_tag=D5F92_RS09610;product=ABC transporter ATP-binding protein;protein_id=WP_000923535.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 8264 10219 . + . ID=gene-D5F92_RS09615;Name=D5F92_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09615;old_locus_tag=D5F92_09630 NZ_QYTJ01000052.1 Protein Homology CDS 8264 10219 . + 0 ID=cds-WP_000499553.1;Parent=gene-D5F92_RS09615;Dbxref=GenBank:WP_000499553.1;Name=WP_000499553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771661.1;locus_tag=D5F92_RS09615;product=FtsX-like permease family protein;protein_id=WP_000499553.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 10329 10997 . + . ID=gene-D5F92_RS09620;Name=D5F92_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09620;old_locus_tag=D5F92_09635 NZ_QYTJ01000052.1 Protein Homology CDS 10329 10997 . + 0 ID=cds-WP_000076874.1;Parent=gene-D5F92_RS09620;Dbxref=GenBank:WP_000076874.1;Name=WP_000076874.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076877.1;locus_tag=D5F92_RS09620;product=response regulator transcription factor;protein_id=WP_000076874.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 10994 11932 . + . ID=gene-D5F92_RS09625;Name=D5F92_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09625;old_locus_tag=D5F92_09640 NZ_QYTJ01000052.1 Protein Homology CDS 10994 11932 . + 0 ID=cds-WP_000620980.1;Parent=gene-D5F92_RS09625;Dbxref=GenBank:WP_000620980.1;Name=WP_000620980.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620981.1;locus_tag=D5F92_RS09625;product=sensor histidine kinase;protein_id=WP_000620980.1;transl_table=11 NZ_QYTJ01000052.1 RefSeq gene 11970 13040 . - . ID=gene-D5F92_RS09630;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=D5F92_RS09630;old_locus_tag=D5F92_09645 NZ_QYTJ01000052.1 Protein Homology CDS 11970 13040 . - 0 ID=cds-WP_000817925.1;Parent=gene-D5F92_RS09630;Dbxref=GenBank:WP_000817925.1;Name=WP_000817925.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012658412.1;locus_tag=D5F92_RS09630;product=tyrosine recombinase XerS;protein_id=WP_000817925.1;transl_table=11 ##sequence-region NZ_QYTJ01000053.1 1 64280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000053.1 RefSeq region 1 64280 . + . ID=NZ_QYTJ01000053.1:1..64280;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000053.1 RefSeq pseudogene 1 299 . + . ID=gene-D5F92_RS09635;Name=D5F92_RS09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09635;old_locus_tag=D5F92_09650;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000053.1 Protein Homology CDS 1 299 . + 2 ID=cds-D5F92_RS09635;Parent=gene-D5F92_RS09635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768291.1;locus_tag=D5F92_RS09635;partial=true;product=ISLre2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 1091 3034 . + . ID=gene-D5F92_RS09640;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=D5F92_RS09640;old_locus_tag=D5F92_09655 NZ_QYTJ01000053.1 Protein Homology CDS 1091 3034 . + 0 ID=cds-WP_124749351.1;Parent=gene-D5F92_RS09640;Dbxref=GenBank:WP_124749351.1;Name=WP_124749351.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645271.1;locus_tag=D5F92_RS09640;product=threonine--tRNA ligase;protein_id=WP_124749351.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 3256 3960 . + . ID=gene-D5F92_RS09645;Name=D5F92_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09645;old_locus_tag=D5F92_09660 NZ_QYTJ01000053.1 Protein Homology CDS 3256 3960 . + 0 ID=cds-WP_001261248.1;Parent=gene-D5F92_RS09645;Dbxref=GenBank:WP_001261248.1;Name=WP_001261248.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649585.1;locus_tag=D5F92_RS09645;product=response regulator transcription factor;protein_id=WP_001261248.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 4058 5077 . + . ID=gene-D5F92_RS09650;Name=D5F92_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09650;old_locus_tag=D5F92_09665 NZ_QYTJ01000053.1 Protein Homology CDS 4058 5077 . + 0 ID=cds-WP_016502762.1;Parent=gene-D5F92_RS09650;Dbxref=GenBank:WP_016502762.1;Name=WP_016502762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140268.1;locus_tag=D5F92_RS09650;product=DUF3114 domain-containing protein;protein_id=WP_016502762.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 5244 5810 . + . ID=gene-D5F92_RS09655;Name=D5F92_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09655;old_locus_tag=D5F92_09670 NZ_QYTJ01000053.1 Protein Homology CDS 5244 5810 . + 0 ID=cds-WP_000592389.1;Parent=gene-D5F92_RS09655;Dbxref=GenBank:WP_000592389.1;Name=WP_000592389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644199.1;locus_tag=D5F92_RS09655;product=PepSY domain-containing protein;protein_id=WP_000592389.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 5859 6509 . - . ID=gene-D5F92_RS09660;Name=D5F92_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09660;old_locus_tag=D5F92_09675 NZ_QYTJ01000053.1 Protein Homology CDS 5859 6509 . - 0 ID=cds-WP_000100034.1;Parent=gene-D5F92_RS09660;Dbxref=GenBank:WP_000100034.1;Name=WP_000100034.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100031.1;locus_tag=D5F92_RS09660;product=amino acid ABC transporter permease;protein_id=WP_000100034.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 6521 7216 . - . ID=gene-D5F92_RS09665;Name=D5F92_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09665;old_locus_tag=D5F92_09680 NZ_QYTJ01000053.1 Protein Homology CDS 6521 7216 . - 0 ID=cds-WP_016502763.1;Parent=gene-D5F92_RS09665;Dbxref=GenBank:WP_016502763.1;Name=WP_016502763.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502763.1;locus_tag=D5F92_RS09665;product=amino acid ABC transporter permease;protein_id=WP_016502763.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 7213 8028 . - . ID=gene-D5F92_RS09670;Name=D5F92_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09670;old_locus_tag=D5F92_09685 NZ_QYTJ01000053.1 Protein Homology CDS 7213 8028 . - 0 ID=cds-WP_124749352.1;Parent=gene-D5F92_RS09670;Dbxref=GenBank:WP_124749352.1;Name=WP_124749352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946174.1;locus_tag=D5F92_RS09670;product=transporter substrate-binding domain-containing protein;protein_id=WP_124749352.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 8040 8795 . - . ID=gene-D5F92_RS09675;Name=D5F92_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09675;old_locus_tag=D5F92_09690 NZ_QYTJ01000053.1 Protein Homology CDS 8040 8795 . - 0 ID=cds-WP_016480611.1;Parent=gene-D5F92_RS09675;Dbxref=GenBank:WP_016480611.1;Name=WP_016480611.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053145.1;locus_tag=D5F92_RS09675;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_016480611.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 9135 9845 . + . ID=gene-D5F92_RS09680;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=D5F92_RS09680;old_locus_tag=D5F92_09695 NZ_QYTJ01000053.1 Protein Homology CDS 9135 9845 . + 0 ID=cds-WP_000722052.1;Parent=gene-D5F92_RS09680;Dbxref=GenBank:WP_000722052.1;Name=WP_000722052.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722051.1;locus_tag=D5F92_RS09680;product=response regulator YycF;protein_id=WP_000722052.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 9838 11187 . + . ID=gene-D5F92_RS09685;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=D5F92_RS09685;old_locus_tag=D5F92_09700 NZ_QYTJ01000053.1 Protein Homology CDS 9838 11187 . + 0 ID=cds-WP_001065469.1;Parent=gene-D5F92_RS09685;Dbxref=GenBank:WP_001065469.1;Name=WP_001065469.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065466.1;locus_tag=D5F92_RS09685;product=cell wall metabolism sensor histidine kinase VicK;protein_id=WP_001065469.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 11191 12000 . + . ID=gene-D5F92_RS09690;Name=D5F92_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09690;old_locus_tag=D5F92_09705 NZ_QYTJ01000053.1 Protein Homology CDS 11191 12000 . + 0 ID=cds-WP_001289498.1;Parent=gene-D5F92_RS09690;Dbxref=GenBank:WP_001289498.1;Name=WP_001289498.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631879.1;locus_tag=D5F92_RS09690;product=MBL fold metallo-hydrolase;protein_id=WP_001289498.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 12003 12371 . + . ID=gene-D5F92_RS09695;Name=D5F92_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09695;old_locus_tag=D5F92_09710 NZ_QYTJ01000053.1 Protein Homology CDS 12003 12371 . + 0 ID=cds-WP_000719385.1;Parent=gene-D5F92_RS09695;Dbxref=GenBank:WP_000719385.1;Name=WP_000719385.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647157.1;locus_tag=D5F92_RS09695;product=YbaN family protein;protein_id=WP_000719385.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 12547 13233 . + . ID=gene-D5F92_RS09700;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=D5F92_RS09700;old_locus_tag=D5F92_09715 NZ_QYTJ01000053.1 Protein Homology CDS 12547 13233 . + 0 ID=cds-WP_016502766.1;Parent=gene-D5F92_RS09700;Dbxref=GenBank:WP_016502766.1;Name=WP_016502766.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631881.1;locus_tag=D5F92_RS09700;product=ribonuclease III;protein_id=WP_016502766.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 13241 16780 . + . ID=gene-D5F92_RS09705;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=D5F92_RS09705;old_locus_tag=D5F92_09720 NZ_QYTJ01000053.1 Protein Homology CDS 13241 16780 . + 0 ID=cds-WP_086163294.1;Parent=gene-D5F92_RS09705;Dbxref=GenBank:WP_086163294.1;Name=WP_086163294.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650979.1;locus_tag=D5F92_RS09705;product=chromosome segregation protein SMC;protein_id=WP_086163294.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 16871 17668 . + . ID=gene-D5F92_RS09710;Name=D5F92_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09710;old_locus_tag=D5F92_09725 NZ_QYTJ01000053.1 Protein Homology CDS 16871 17668 . + 0 ID=cds-WP_000594097.1;Parent=gene-D5F92_RS09710;Dbxref=GenBank:WP_000594097.1;Name=WP_000594097.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480613.1;locus_tag=D5F92_RS09710;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000594097.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 17668 18492 . + . ID=gene-D5F92_RS09715;Name=D5F92_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09715;old_locus_tag=D5F92_09730 NZ_QYTJ01000053.1 Protein Homology CDS 17668 18492 . + 0 ID=cds-WP_016502768.1;Parent=gene-D5F92_RS09715;Dbxref=GenBank:WP_016502768.1;Name=WP_016502768.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285093.1;locus_tag=D5F92_RS09715;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016502768.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 18492 20090 . + . ID=gene-D5F92_RS09720;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=D5F92_RS09720;old_locus_tag=D5F92_09735 NZ_QYTJ01000053.1 Protein Homology CDS 18492 20090 . + 0 ID=cds-WP_124749353.1;Parent=gene-D5F92_RS09720;Dbxref=GenBank:WP_124749353.1;Name=WP_124749353.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522263.1;locus_tag=D5F92_RS09720;product=signal recognition particle-docking protein FtsY;protein_id=WP_124749353.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 20127 20939 . - . ID=gene-D5F92_RS09725;Name=D5F92_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09725;old_locus_tag=D5F92_09740 NZ_QYTJ01000053.1 Protein Homology CDS 20127 20939 . - 0 ID=cds-WP_086163295.1;Parent=gene-D5F92_RS09725;Dbxref=GenBank:WP_086163295.1;Name=WP_086163295.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617812.1;locus_tag=D5F92_RS09725;product=TIGR03943 family putative permease subunit;protein_id=WP_086163295.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 20939 21841 . - . ID=gene-D5F92_RS09730;Name=D5F92_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09730;old_locus_tag=D5F92_09745 NZ_QYTJ01000053.1 Protein Homology CDS 20939 21841 . - 0 ID=cds-WP_000350891.1;Parent=gene-D5F92_RS09730;Dbxref=GenBank:WP_000350891.1;Name=WP_000350891.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480616.1;locus_tag=D5F92_RS09730;product=permease;protein_id=WP_000350891.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 21847 21975 . - . ID=gene-D5F92_RS09735;Name=D5F92_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09735;old_locus_tag=D5F92_09750 NZ_QYTJ01000053.1 Protein Homology CDS 21847 21975 . - 0 ID=cds-WP_001018624.1;Parent=gene-D5F92_RS09735;Dbxref=GenBank:WP_001018624.1;Name=WP_001018624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018624.1;locus_tag=D5F92_RS09735;product=SPJ_0845 family protein;protein_id=WP_001018624.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 22108 23151 . + . ID=gene-D5F92_RS09740;Name=D5F92_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09740;old_locus_tag=D5F92_09755 NZ_QYTJ01000053.1 Protein Homology CDS 22108 23151 . + 0 ID=cds-WP_124749354.1;Parent=gene-D5F92_RS09740;Dbxref=GenBank:WP_124749354.1;Name=WP_124749354.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571058.1;locus_tag=D5F92_RS09740;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_124749354.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 23257 25419 . + . ID=gene-D5F92_RS09745;Name=D5F92_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09745;old_locus_tag=D5F92_09760 NZ_QYTJ01000053.1 Protein Homology CDS 23257 25419 . + 0 ID=cds-WP_016502772.1;Parent=gene-D5F92_RS09745;Dbxref=GenBank:WP_016502772.1;Name=WP_016502772.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767169.1;locus_tag=D5F92_RS09745;product=Tex family protein;protein_id=WP_016502772.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 25382 25852 . + . ID=gene-D5F92_RS09750;Name=D5F92_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09750;old_locus_tag=D5F92_09765 NZ_QYTJ01000053.1 Protein Homology CDS 25382 25852 . + 0 ID=cds-WP_000366648.1;Parent=gene-D5F92_RS09750;Dbxref=GenBank:WP_000366648.1;Name=WP_000366648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366650.1;locus_tag=D5F92_RS09750;product=SprT family protein;protein_id=WP_000366648.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 25921 26184 . + . ID=gene-D5F92_RS09755;Name=D5F92_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09755;old_locus_tag=D5F92_09770 NZ_QYTJ01000053.1 Protein Homology CDS 25921 26184 . + 0 ID=cds-WP_000842478.1;Parent=gene-D5F92_RS09755;Dbxref=GenBank:WP_000842478.1;Name=WP_000842478.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771968.1;locus_tag=D5F92_RS09755;product=PspC domain-containing protein;protein_id=WP_000842478.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 26412 27347 . + . ID=gene-D5F92_RS09765;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=D5F92_RS09765;old_locus_tag=D5F92_09780 NZ_QYTJ01000053.1 Protein Homology CDS 26412 27347 . + 0 ID=cds-WP_000301753.1;Parent=gene-D5F92_RS09765;Dbxref=GenBank:WP_000301753.1;Name=WP_000301753.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767755.1;locus_tag=D5F92_RS09765;product=HPr(Ser) kinase/phosphatase;protein_id=WP_000301753.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 27340 28113 . + . ID=gene-D5F92_RS09770;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=D5F92_RS09770;old_locus_tag=D5F92_09785 NZ_QYTJ01000053.1 Protein Homology CDS 27340 28113 . + 0 ID=cds-WP_000609728.1;Parent=gene-D5F92_RS09770;Dbxref=GenBank:WP_000609728.1;Name=WP_000609728.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609727.1;locus_tag=D5F92_RS09770;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000609728.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 28128 28526 . + . ID=gene-D5F92_RS09775;Name=D5F92_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09775;old_locus_tag=D5F92_09790 NZ_QYTJ01000053.1 Protein Homology CDS 28128 28526 . + 0 ID=cds-WP_086163298.1;Parent=gene-D5F92_RS09775;Dbxref=GenBank:WP_086163298.1;Name=WP_086163298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502774.1;locus_tag=D5F92_RS09775;product=DUF948 domain-containing protein;protein_id=WP_086163298.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 28523 28954 . + . ID=gene-D5F92_RS09780;Name=D5F92_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09780;old_locus_tag=D5F92_09795 NZ_QYTJ01000053.1 Protein Homology CDS 28523 28954 . + 0 ID=cds-WP_000039971.1;Parent=gene-D5F92_RS09780;Dbxref=GenBank:WP_000039971.1;Name=WP_000039971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480620.1;locus_tag=D5F92_RS09780;product=YtxH domain-containing protein;protein_id=WP_000039971.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 28997 29272 . - . ID=gene-D5F92_RS09785;Name=D5F92_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09785;old_locus_tag=D5F92_09800 NZ_QYTJ01000053.1 Protein Homology CDS 28997 29272 . - 0 ID=cds-WP_000097985.1;Parent=gene-D5F92_RS09785;Dbxref=GenBank:WP_000097985.1;Name=WP_000097985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097986.1;locus_tag=D5F92_RS09785;product=DUF3270 domain-containing protein;protein_id=WP_000097985.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 29613 30539 . + . ID=gene-D5F92_RS09790;Name=D5F92_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09790;old_locus_tag=D5F92_09805 NZ_QYTJ01000053.1 Protein Homology CDS 29613 30539 . + 0 ID=cds-WP_016502775.1;Parent=gene-D5F92_RS09790;Dbxref=GenBank:WP_016502775.1;Name=WP_016502775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997850.1;locus_tag=D5F92_RS09790;product=peptidase U32 family protein;protein_id=WP_016502775.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 30669 31955 . + . ID=gene-D5F92_RS09795;Name=D5F92_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09795;old_locus_tag=D5F92_09810 NZ_QYTJ01000053.1 Protein Homology CDS 30669 31955 . + 0 ID=cds-WP_016502776.1;Parent=gene-D5F92_RS09795;Dbxref=GenBank:WP_016502776.1;Name=WP_016502776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648447.1;locus_tag=D5F92_RS09795;product=peptidase U32 family protein;protein_id=WP_016502776.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 32082 32294 . + . ID=gene-D5F92_RS09800;Name=D5F92_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09800;old_locus_tag=D5F92_09815 NZ_QYTJ01000053.1 Protein Homology CDS 32082 32294 . + 0 ID=cds-WP_001288869.1;Parent=gene-D5F92_RS09800;Dbxref=GenBank:WP_001288869.1;Name=WP_001288869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771805.1;locus_tag=D5F92_RS09800;product=YdbC family protein;protein_id=WP_001288869.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 32419 33216 . + . ID=gene-D5F92_RS09805;Name=D5F92_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09805;old_locus_tag=D5F92_09820 NZ_QYTJ01000053.1 Protein Homology CDS 32419 33216 . + 0 ID=cds-WP_016480623.1;Parent=gene-D5F92_RS09805;Dbxref=GenBank:WP_016480623.1;Name=WP_016480623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000618018.1;locus_tag=D5F92_RS09805;product=tryptophan-rich sensory protein;protein_id=WP_016480623.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 33318 34658 . - . ID=gene-D5F92_RS09810;Name=D5F92_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09810;old_locus_tag=D5F92_09825 NZ_QYTJ01000053.1 Protein Homology CDS 33318 34658 . - 0 ID=cds-WP_016480624.1;Parent=gene-D5F92_RS09810;Dbxref=GenBank:WP_016480624.1;Name=WP_016480624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001073016.1;locus_tag=D5F92_RS09810;product=Nramp family divalent metal transporter;protein_id=WP_016480624.1;transl_table=11 NZ_QYTJ01000053.1 cmsearch riboswitch 35078 35192 . + . ID=id-NZ_QYTJ01000053.1:35078..35192;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTJ01000053.1 RefSeq gene 35386 36495 . + . ID=gene-D5F92_RS09815;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=D5F92_RS09815;old_locus_tag=D5F92_09830 NZ_QYTJ01000053.1 Protein Homology CDS 35386 36495 . + 0 ID=cds-WP_000975997.1;Parent=gene-D5F92_RS09815;Dbxref=GenBank:WP_000975997.1;Name=WP_000975997.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975996.1;locus_tag=D5F92_RS09815;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_000975997.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 36476 37126 . + . ID=gene-D5F92_RS09820;Name=D5F92_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09820;old_locus_tag=D5F92_09835 NZ_QYTJ01000053.1 Protein Homology CDS 36476 37126 . + 0 ID=cds-WP_016480625.1;Parent=gene-D5F92_RS09820;Dbxref=GenBank:WP_016480625.1;Name=WP_016480625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493854.1;locus_tag=D5F92_RS09820;product=riboflavin synthase;protein_id=WP_016480625.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 37144 38337 . + . ID=gene-D5F92_RS09825;Name=D5F92_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09825;old_locus_tag=D5F92_09840 NZ_QYTJ01000053.1 Protein Homology CDS 37144 38337 . + 0 ID=cds-WP_000885818.1;Parent=gene-D5F92_RS09825;Dbxref=GenBank:WP_000885818.1;Name=WP_000885818.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768533.1;locus_tag=D5F92_RS09825;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_000885818.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 38352 38822 . + . ID=gene-D5F92_RS09830;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=D5F92_RS09830;old_locus_tag=D5F92_09845 NZ_QYTJ01000053.1 Protein Homology CDS 38352 38822 . + 0 ID=cds-WP_016502777.1;Parent=gene-D5F92_RS09830;Dbxref=GenBank:WP_016502777.1;Name=WP_016502777.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650902.1;locus_tag=D5F92_RS09830;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_016502777.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 38897 40387 . - . ID=gene-D5F92_RS09835;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=D5F92_RS09835;old_locus_tag=D5F92_09850 NZ_QYTJ01000053.1 Protein Homology CDS 38897 40387 . - 0 ID=cds-WP_000070708.1;Parent=gene-D5F92_RS09835;Dbxref=GenBank:WP_000070708.1;Name=WP_000070708.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003055423.1;locus_tag=D5F92_RS09835;product=lysine--tRNA ligase;protein_id=WP_000070708.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 40562 41464 . + . ID=gene-D5F92_RS09840;Name=D5F92_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09840;old_locus_tag=D5F92_09855 NZ_QYTJ01000053.1 Protein Homology CDS 40562 41464 . + 0 ID=cds-WP_000633104.1;Parent=gene-D5F92_RS09840;Dbxref=GenBank:WP_000633104.1;Name=WP_000633104.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633099.1;locus_tag=D5F92_RS09840;product=HAD family hydrolase;protein_id=WP_000633104.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq pseudogene 41500 41637 . - . ID=gene-D5F92_RS09845;Name=D5F92_RS09845;end_range=41637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09845;old_locus_tag=D5F92_09860;partial=true;pseudo=true NZ_QYTJ01000053.1 Protein Homology CDS 41500 41637 . - 0 ID=cds-D5F92_RS09845;Parent=gene-D5F92_RS09845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675283.1;locus_tag=D5F92_RS09845;partial=true;product=histidine phosphatase family protein;pseudo=true;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 41677 42782 . - . ID=gene-D5F92_RS09850;Name=D5F92_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09850;old_locus_tag=D5F92_09865 NZ_QYTJ01000053.1 Protein Homology CDS 42506 42782 . - 0 ID=cds-WP_124749317.1;Parent=gene-D5F92_RS09850;Dbxref=GenBank:WP_124749317.1;Name=WP_124749317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS09850;product=IS3 family transposase;protein_id=WP_124749317.1;transl_table=11 NZ_QYTJ01000053.1 Protein Homology CDS 41677 42506 . - 2 ID=cds-WP_124749317.1;Parent=gene-D5F92_RS09850;Dbxref=GenBank:WP_124749317.1;Name=WP_124749317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS09850;product=IS3 family transposase;protein_id=WP_124749317.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq pseudogene 42851 43636 . + . ID=gene-D5F92_RS09855;Name=D5F92_RS09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09855;old_locus_tag=D5F92_09870;partial=true;pseudo=true;start_range=.,42851 NZ_QYTJ01000053.1 Protein Homology CDS 42851 43636 . + 0 ID=cds-D5F92_RS09855;Parent=gene-D5F92_RS09855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160532.1;locus_tag=D5F92_RS09855;partial=true;product=IS30-like element ISSag9 family transposase;pseudo=true;start_range=.,42851;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 43972 45354 . - . ID=gene-D5F92_RS09860;Name=D5F92_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09860;old_locus_tag=D5F92_09875 NZ_QYTJ01000053.1 Protein Homology CDS 43972 45354 . - 0 ID=cds-WP_000958259.1;Parent=gene-D5F92_RS09860;Dbxref=GenBank:WP_000958259.1;Name=WP_000958259.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958256.1;locus_tag=D5F92_RS09860;product=MFS transporter;protein_id=WP_000958259.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 45362 46576 . - . ID=gene-D5F92_RS09865;Name=D5F92_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09865;old_locus_tag=D5F92_09880 NZ_QYTJ01000053.1 Protein Homology CDS 45362 46576 . - 0 ID=cds-WP_001262294.1;Parent=gene-D5F92_RS09865;Dbxref=GenBank:WP_001262294.1;Name=WP_001262294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262291.1;locus_tag=D5F92_RS09865;product=M20 family metallopeptidase;protein_id=WP_001262294.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 46835 47740 . + . ID=gene-D5F92_RS09870;Name=D5F92_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09870;old_locus_tag=D5F92_09885 NZ_QYTJ01000053.1 Protein Homology CDS 46835 47740 . + 0 ID=cds-WP_180383436.1;Parent=gene-D5F92_RS09870;Dbxref=GenBank:WP_180383436.1;Name=WP_180383436.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768245.1;locus_tag=D5F92_RS09870;product=LysR family transcriptional regulator;protein_id=WP_180383436.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 47801 48154 . + . ID=gene-D5F92_RS09875;Name=D5F92_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09875;old_locus_tag=D5F92_09890 NZ_QYTJ01000053.1 Protein Homology CDS 47801 48154 . + 0 ID=cds-WP_000639447.1;Parent=gene-D5F92_RS09875;Dbxref=GenBank:WP_000639447.1;Name=WP_000639447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639445.1;locus_tag=D5F92_RS09875;product=DUF3397 domain-containing protein;protein_id=WP_000639447.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 48183 49898 . - . ID=gene-D5F92_RS09880;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=D5F92_RS09880;old_locus_tag=D5F92_09895 NZ_QYTJ01000053.1 Protein Homology CDS 48183 49898 . - 0 ID=cds-WP_124749623.1;Parent=gene-D5F92_RS09880;Dbxref=GenBank:WP_124749623.1;Name=WP_124749623.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=4-aminobenzoate biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647893.1;locus_tag=D5F92_RS09880;product=aminodeoxychorismate synthase component I;protein_id=WP_124749623.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 49980 52430 . - . ID=gene-D5F92_RS09885;Name=D5F92_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09885;old_locus_tag=D5F92_09900 NZ_QYTJ01000053.1 Protein Homology CDS 49980 52430 . - 0 ID=cds-WP_000231568.1;Parent=gene-D5F92_RS09885;Dbxref=GenBank:WP_000231568.1;Name=WP_000231568.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231573.1;locus_tag=D5F92_RS09885;product=DNA translocase FtsK;protein_id=WP_000231568.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 52596 53399 . + . ID=gene-D5F92_RS09890;Name=D5F92_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09890;old_locus_tag=D5F92_09905 NZ_QYTJ01000053.1 Protein Homology CDS 52596 53399 . + 0 ID=cds-WP_124749139.1;Parent=gene-D5F92_RS09890;Dbxref=GenBank:WP_124749139.1;Name=WP_124749139.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719928.1;locus_tag=D5F92_RS09890;product=peptidylprolyl isomerase;protein_id=WP_124749139.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 53451 54284 . - . ID=gene-D5F92_RS09895;Name=D5F92_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09895;old_locus_tag=D5F92_09910 NZ_QYTJ01000053.1 Protein Homology CDS 53451 54284 . - 0 ID=cds-WP_000494350.1;Parent=gene-D5F92_RS09895;Dbxref=GenBank:WP_000494350.1;Name=WP_000494350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494351.1;locus_tag=D5F92_RS09895;product=metal ABC transporter permease;protein_id=WP_000494350.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 54286 55002 . - . ID=gene-D5F92_RS09900;Name=D5F92_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09900;old_locus_tag=D5F92_09915 NZ_QYTJ01000053.1 Protein Homology CDS 54286 55002 . - 0 ID=cds-WP_000587174.1;Parent=gene-D5F92_RS09900;Dbxref=GenBank:WP_000587174.1;Name=WP_000587174.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481069.1;locus_tag=D5F92_RS09900;product=metal ABC transporter ATP-binding protein;protein_id=WP_000587174.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 55173 56099 . - . ID=gene-D5F92_RS09905;Name=D5F92_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09905;old_locus_tag=D5F92_09920 NZ_QYTJ01000053.1 Protein Homology CDS 55173 56099 . - 0 ID=cds-WP_000759089.1;Parent=gene-D5F92_RS09905;Dbxref=GenBank:WP_000759089.1;Name=WP_000759089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767839.1;locus_tag=D5F92_RS09905;product=metal ABC transporter substrate-binding protein;protein_id=WP_000759089.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 56266 56913 . + . ID=gene-D5F92_RS09910;Name=D5F92_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09910;old_locus_tag=D5F92_09925 NZ_QYTJ01000053.1 Protein Homology CDS 56266 56913 . + 0 ID=cds-WP_016503081.1;Parent=gene-D5F92_RS09910;Dbxref=GenBank:WP_016503081.1;Name=WP_016503081.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188484.1;locus_tag=D5F92_RS09910;product=metal-dependent transcriptional regulator;protein_id=WP_016503081.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 56953 57642 . - . ID=gene-D5F92_RS09915;Name=D5F92_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09915;old_locus_tag=D5F92_09930 NZ_QYTJ01000053.1 Protein Homology CDS 56953 57642 . - 0 ID=cds-WP_000689759.1;Parent=gene-D5F92_RS09915;Dbxref=GenBank:WP_000689759.1;Name=WP_000689759.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689756.1;locus_tag=D5F92_RS09915;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_000689759.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 57652 57921 . - . ID=gene-D5F92_RS09920;Name=macP;gbkey=Gene;gene=macP;gene_biotype=protein_coding;locus_tag=D5F92_RS09920;old_locus_tag=D5F92_09935 NZ_QYTJ01000053.1 Protein Homology CDS 57652 57921 . - 0 ID=cds-WP_000517852.1;Parent=gene-D5F92_RS09920;Dbxref=GenBank:WP_000517852.1;Name=WP_000517852.1;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517852.1;locus_tag=D5F92_RS09920;product=cell wall synthase accessory phosphoprotein MacP;protein_id=WP_000517852.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 57921 58475 . - . ID=gene-D5F92_RS09925;Name=D5F92_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09925;old_locus_tag=D5F92_09940 NZ_QYTJ01000053.1 Protein Homology CDS 57921 58475 . - 0 ID=cds-WP_000344991.1;Parent=gene-D5F92_RS09925;Dbxref=GenBank:WP_000344991.1;Name=WP_000344991.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632172.1;locus_tag=D5F92_RS09925;product=NUDIX domain-containing protein;protein_id=WP_000344991.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 58496 59875 . - . ID=gene-D5F92_RS09930;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=D5F92_RS09930;old_locus_tag=D5F92_09945 NZ_QYTJ01000053.1 Protein Homology CDS 58496 59875 . - 0 ID=cds-WP_000073778.1;Parent=gene-D5F92_RS09930;Dbxref=GenBank:WP_000073778.1;Name=WP_000073778.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899862.1;locus_tag=D5F92_RS09930;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000073778.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 60119 60532 . - . ID=gene-D5F92_RS09940;Name=D5F92_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09940;old_locus_tag=D5F92_09955 NZ_QYTJ01000053.1 Protein Homology CDS 60119 60532 . - 0 ID=cds-WP_016481074.1;Parent=gene-D5F92_RS09940;Dbxref=GenBank:WP_016481074.1;Name=WP_016481074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237565.1;locus_tag=D5F92_RS09940;product=VOC family protein;protein_id=WP_016481074.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 60545 60922 . - . ID=gene-D5F92_RS09945;Name=D5F92_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09945;old_locus_tag=D5F92_09960 NZ_QYTJ01000053.1 Protein Homology CDS 60545 60922 . - 0 ID=cds-WP_016503082.1;Parent=gene-D5F92_RS09945;Dbxref=GenBank:WP_016503082.1;Name=WP_016503082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625774.1;locus_tag=D5F92_RS09945;product=VOC family protein;protein_id=WP_016503082.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 61011 61967 . - . ID=gene-D5F92_RS09950;Name=D5F92_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09950;old_locus_tag=D5F92_09965 NZ_QYTJ01000053.1 Protein Homology CDS 61011 61967 . - 0 ID=cds-WP_000762186.1;Parent=gene-D5F92_RS09950;Dbxref=GenBank:WP_000762186.1;Name=WP_000762186.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481075.1;locus_tag=D5F92_RS09950;product=Gfo/Idh/MocA family protein;protein_id=WP_000762186.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 61964 62416 . - . ID=gene-D5F92_RS09955;Name=D5F92_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09955;old_locus_tag=D5F92_09970 NZ_QYTJ01000053.1 Protein Homology CDS 61964 62416 . - 0 ID=cds-WP_016503083.1;Parent=gene-D5F92_RS09955;Dbxref=GenBank:WP_016503083.1;Name=WP_016503083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647214.1;locus_tag=D5F92_RS09955;product=ASCH domain-containing protein;protein_id=WP_016503083.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 62413 62658 . - . ID=gene-D5F92_RS09960;Name=D5F92_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09960;old_locus_tag=D5F92_09975 NZ_QYTJ01000053.1 Protein Homology CDS 62413 62658 . - 0 ID=cds-WP_001233823.1;Parent=gene-D5F92_RS09960;Dbxref=GenBank:WP_001233823.1;Name=WP_001233823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233822.1;locus_tag=D5F92_RS09960;product=DUF3977 family protein;protein_id=WP_001233823.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 62655 63353 . - . ID=gene-D5F92_RS09965;Name=D5F92_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09965;old_locus_tag=D5F92_09980 NZ_QYTJ01000053.1 Protein Homology CDS 62655 63353 . - 0 ID=cds-WP_016503084.1;Parent=gene-D5F92_RS09965;Dbxref=GenBank:WP_016503084.1;Name=WP_016503084.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002990841.1;locus_tag=D5F92_RS09965;product=3-oxoacyl-ACP reductase;protein_id=WP_016503084.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq gene 63346 63582 . - . ID=gene-D5F92_RS09970;Name=D5F92_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09970;old_locus_tag=D5F92_09985 NZ_QYTJ01000053.1 Protein Homology CDS 63346 63582 . - 0 ID=cds-WP_000141918.1;Parent=gene-D5F92_RS09970;Dbxref=GenBank:WP_000141918.1;Name=WP_000141918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018367459.1;locus_tag=D5F92_RS09970;product=DUF2829 domain-containing protein;protein_id=WP_000141918.1;transl_table=11 NZ_QYTJ01000053.1 RefSeq pseudogene 63838 64280 . + . ID=gene-D5F92_RS09975;Name=D5F92_RS09975;end_range=64280,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS09975;old_locus_tag=D5F92_09990;partial=true;pseudo=true NZ_QYTJ01000053.1 Protein Homology CDS 63838 64280 . + 0 ID=cds-D5F92_RS09975;Parent=gene-D5F92_RS09975;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=64280,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS09975;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000054.1 1 34061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000054.1 RefSeq region 1 34061 . + . ID=NZ_QYTJ01000054.1:1..34061;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000054.1 RefSeq gene 139 1800 . + . ID=gene-D5F92_RS09980;Name=D5F92_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09980;old_locus_tag=D5F92_09995 NZ_QYTJ01000054.1 Protein Homology CDS 139 1800 . + 0 ID=cds-WP_016502855.1;Parent=gene-D5F92_RS09980;Dbxref=GenBank:WP_016502855.1;Name=WP_016502855.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093963.1;locus_tag=D5F92_RS09980;product=peptide ABC transporter substrate-binding protein;protein_id=WP_016502855.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 1833 2606 . - . ID=gene-D5F92_RS09985;Name=D5F92_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09985;old_locus_tag=D5F92_10000 NZ_QYTJ01000054.1 Protein Homology CDS 1833 2606 . - 0 ID=cds-WP_000622403.1;Parent=gene-D5F92_RS09985;Dbxref=GenBank:WP_000622403.1;Name=WP_000622403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622397.1;locus_tag=D5F92_RS09985;product=DUF3307 domain-containing protein;protein_id=WP_000622403.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 2596 3282 . - . ID=gene-D5F92_RS09990;Name=D5F92_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS09990;old_locus_tag=D5F92_10005 NZ_QYTJ01000054.1 Protein Homology CDS 2596 3282 . - 0 ID=cds-WP_000280308.1;Parent=gene-D5F92_RS09990;Dbxref=GenBank:WP_000280308.1;Name=WP_000280308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280304.1;locus_tag=D5F92_RS09990;product=SatD family protein;protein_id=WP_000280308.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 3349 4914 . - . ID=gene-D5F92_RS09995;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=D5F92_RS09995;old_locus_tag=D5F92_10010 NZ_QYTJ01000054.1 Protein Homology CDS 3349 4914 . - 0 ID=cds-WP_000863593.1;Parent=gene-D5F92_RS09995;Dbxref=GenBank:WP_000863593.1;Name=WP_000863593.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648039.1;locus_tag=D5F92_RS09995;product=signal recognition particle protein;protein_id=WP_000863593.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 4932 5264 . - . ID=gene-D5F92_RS10000;Name=D5F92_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10000;old_locus_tag=D5F92_10015 NZ_QYTJ01000054.1 Protein Homology CDS 4932 5264 . - 0 ID=cds-WP_000402075.1;Parent=gene-D5F92_RS10000;Dbxref=GenBank:WP_000402075.1;Name=WP_000402075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649495.1;locus_tag=D5F92_RS10000;product=putative DNA-binding protein;protein_id=WP_000402075.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 5353 6666 . - . ID=gene-D5F92_RS10005;Name=D5F92_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10005;old_locus_tag=D5F92_10020 NZ_QYTJ01000054.1 Protein Homology CDS 5353 6666 . - 0 ID=cds-WP_000042576.1;Parent=gene-D5F92_RS10005;Dbxref=GenBank:WP_000042576.1;Name=WP_000042576.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042569.1;locus_tag=D5F92_RS10005;product=sensor histidine kinase;protein_id=WP_000042576.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 6650 7330 . - . ID=gene-D5F92_RS10010;Name=D5F92_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10010;old_locus_tag=D5F92_10025 NZ_QYTJ01000054.1 Protein Homology CDS 6650 7330 . - 0 ID=cds-WP_000590620.1;Parent=gene-D5F92_RS10010;Dbxref=GenBank:WP_000590620.1;Name=WP_000590620.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644248.1;locus_tag=D5F92_RS10010;product=response regulator transcription factor;protein_id=WP_000590620.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 7492 10035 . - . ID=gene-D5F92_RS10015;Name=D5F92_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10015;old_locus_tag=D5F92_10030 NZ_QYTJ01000054.1 Protein Homology CDS 7492 10035 . - 0 ID=cds-WP_124749177.1;Parent=gene-D5F92_RS10015;Dbxref=GenBank:WP_124749177.1;Name=WP_124749177.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859386.1;locus_tag=D5F92_RS10015;product=M1 family metallopeptidase;protein_id=WP_124749177.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 10181 10834 . - . ID=gene-D5F92_RS10020;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=D5F92_RS10020;old_locus_tag=D5F92_10035 NZ_QYTJ01000054.1 Protein Homology CDS 10181 10834 . - 0 ID=cds-WP_000946330.1;Parent=gene-D5F92_RS10020;Dbxref=GenBank:WP_000946330.1;Name=WP_000946330.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294804.1;locus_tag=D5F92_RS10020;product=phosphate signaling complex protein PhoU;protein_id=WP_000946330.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 10868 11626 . - . ID=gene-D5F92_RS10025;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F92_RS10025;old_locus_tag=D5F92_10040 NZ_QYTJ01000054.1 Protein Homology CDS 10868 11626 . - 0 ID=cds-WP_124749377.1;Parent=gene-D5F92_RS10025;Dbxref=GenBank:WP_124749377.1;Name=WP_124749377.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294590.1;locus_tag=D5F92_RS10025;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_124749377.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 11638 12441 . - . ID=gene-D5F92_RS10030;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F92_RS10030;old_locus_tag=D5F92_10045 NZ_QYTJ01000054.1 Protein Homology CDS 11638 12441 . - 0 ID=cds-WP_000852852.1;Parent=gene-D5F92_RS10030;Dbxref=GenBank:WP_000852852.1;Name=WP_000852852.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852852.1;locus_tag=D5F92_RS10030;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000852852.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 12453 13340 . - . ID=gene-D5F92_RS10035;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D5F92_RS10035;old_locus_tag=D5F92_10050 NZ_QYTJ01000054.1 Protein Homology CDS 12453 13340 . - 0 ID=cds-WP_000992189.1;Parent=gene-D5F92_RS10035;Dbxref=GenBank:WP_000992189.1;Name=WP_000992189.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992189.1;locus_tag=D5F92_RS10035;product=phosphate ABC transporter permease PstA;protein_id=WP_000992189.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 13330 14247 . - . ID=gene-D5F92_RS10040;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D5F92_RS10040;old_locus_tag=D5F92_10055 NZ_QYTJ01000054.1 Protein Homology CDS 13330 14247 . - 0 ID=cds-WP_000795717.1;Parent=gene-D5F92_RS10040;Dbxref=GenBank:WP_000795717.1;Name=WP_000795717.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378778.1;locus_tag=D5F92_RS10040;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_000795717.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 14293 15159 . - . ID=gene-D5F92_RS10045;Name=D5F92_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10045;old_locus_tag=D5F92_10060 NZ_QYTJ01000054.1 Protein Homology CDS 14293 15159 . - 0 ID=cds-WP_180383572.1;Parent=gene-D5F92_RS10045;Dbxref=GenBank:WP_180383572.1;Name=WP_180383572.1;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647148.1;locus_tag=D5F92_RS10045;product=phosphate ABC transporter substrate-binding protein PstS family protein;protein_id=WP_180383572.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 15338 16648 . - . ID=gene-D5F92_RS10050;Name=D5F92_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10050;old_locus_tag=D5F92_10065 NZ_QYTJ01000054.1 Protein Homology CDS 15338 16648 . - 0 ID=cds-WP_016502859.1;Parent=gene-D5F92_RS10050;Dbxref=GenBank:WP_016502859.1;Name=WP_016502859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775396.1;locus_tag=D5F92_RS10050;product=RsmF rRNA methyltransferase first C-terminal domain-containing protein;protein_id=WP_016502859.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 16716 17480 . - . ID=gene-D5F92_RS10055;Name=D5F92_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10055;old_locus_tag=D5F92_10070 NZ_QYTJ01000054.1 Protein Homology CDS 16716 17480 . - 0 ID=cds-WP_086163332.1;Parent=gene-D5F92_RS10055;Dbxref=GenBank:WP_086163332.1;Name=WP_086163332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338953.1;locus_tag=D5F92_RS10055;product=inositol monophosphatase family protein;protein_id=WP_086163332.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 17470 17751 . - . ID=gene-D5F92_RS10060;Name=D5F92_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10060;old_locus_tag=D5F92_10075 NZ_QYTJ01000054.1 Protein Homology CDS 17470 17751 . - 0 ID=cds-WP_000625908.1;Parent=gene-D5F92_RS10060;Dbxref=GenBank:WP_000625908.1;Name=WP_000625908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625902.1;locus_tag=D5F92_RS10060;product=UPF0223 family protein;protein_id=WP_000625908.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 17744 18157 . - . ID=gene-D5F92_RS10065;Name=D5F92_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10065;old_locus_tag=D5F92_10080 NZ_QYTJ01000054.1 Protein Homology CDS 17744 18157 . - 0 ID=cds-WP_000631264.1;Parent=gene-D5F92_RS10065;Dbxref=GenBank:WP_000631264.1;Name=WP_000631264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631264.1;locus_tag=D5F92_RS10065;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_000631264.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 18200 19132 . - . ID=gene-D5F92_RS10070;Name=D5F92_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10070;old_locus_tag=D5F92_10085 NZ_QYTJ01000054.1 Protein Homology CDS 18200 19132 . - 0 ID=cds-WP_000690918.1;Parent=gene-D5F92_RS10070;Dbxref=GenBank:WP_000690918.1;Name=WP_000690918.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690917.1;locus_tag=D5F92_RS10070;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000690918.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 19145 20029 . - . ID=gene-D5F92_RS10075;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=D5F92_RS10075;old_locus_tag=D5F92_10090 NZ_QYTJ01000054.1 Protein Homology CDS 19145 20029 . - 0 ID=cds-WP_001883507.1;Parent=gene-D5F92_RS10075;Dbxref=GenBank:WP_001883507.1;Name=WP_001883507.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001876923.1;locus_tag=D5F92_RS10075;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_001883507.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 20121 20552 . - . ID=gene-D5F92_RS10080;Name=D5F92_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10080;old_locus_tag=D5F92_10095 NZ_QYTJ01000054.1 Protein Homology CDS 20121 20552 . - 0 ID=cds-WP_000702702.1;Parent=gene-D5F92_RS10080;Dbxref=GenBank:WP_000702702.1;Name=WP_000702702.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631985.1;locus_tag=D5F92_RS10080;product=GNAT family N-acetyltransferase;protein_id=WP_000702702.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 20565 21836 . - . ID=gene-D5F92_RS10085;Name=D5F92_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10085;old_locus_tag=D5F92_10100 NZ_QYTJ01000054.1 Protein Homology CDS 20565 21836 . - 0 ID=cds-WP_016502865.1;Parent=gene-D5F92_RS10085;Dbxref=GenBank:WP_016502865.1;Name=WP_016502865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002580.1;locus_tag=D5F92_RS10085;product=DUF2130 domain-containing protein;protein_id=WP_016502865.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 21870 22460 . - . ID=gene-D5F92_RS10090;Name=D5F92_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10090;old_locus_tag=D5F92_10105 NZ_QYTJ01000054.1 Protein Homology CDS 21870 22460 . - 0 ID=cds-WP_001135930.1;Parent=gene-D5F92_RS10090;Dbxref=GenBank:WP_001135930.1;Name=WP_001135930.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135933.1;locus_tag=D5F92_RS10090;product=restriction endonuclease subunit S;protein_id=WP_001135930.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 22567 23445 . - . ID=gene-D5F92_RS10095;Name=D5F92_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10095;old_locus_tag=D5F92_10110 NZ_QYTJ01000054.1 Protein Homology CDS 22567 23445 . - 0 ID=cds-WP_086163333.1;Parent=gene-D5F92_RS10095;Dbxref=GenBank:WP_086163333.1;Name=WP_086163333.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209258.1;locus_tag=D5F92_RS10095;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_086163333.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 23551 26181 . - . ID=gene-D5F92_RS10100;Name=D5F92_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10100;old_locus_tag=D5F92_10115 NZ_QYTJ01000054.1 Protein Homology CDS 23551 26181 . - 0 ID=cds-WP_016502867.1;Parent=gene-D5F92_RS10100;Dbxref=GenBank:WP_016502867.1;Name=WP_016502867.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520608.1;locus_tag=D5F92_RS10100;product=ABC transporter permease;protein_id=WP_016502867.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 26193 26894 . - . ID=gene-D5F92_RS10105;Name=D5F92_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10105;old_locus_tag=D5F92_10120 NZ_QYTJ01000054.1 Protein Homology CDS 26193 26894 . - 0 ID=cds-WP_124749380.1;Parent=gene-D5F92_RS10105;Dbxref=GenBank:WP_124749380.1;Name=WP_124749380.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058545.1;locus_tag=D5F92_RS10105;product=ABC transporter ATP-binding protein;protein_id=WP_124749380.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 27031 29151 . - . ID=gene-D5F92_RS10110;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=D5F92_RS10110;old_locus_tag=D5F92_10125 NZ_QYTJ01000054.1 Protein Homology CDS 27031 29151 . - 0 ID=cds-WP_086163334.1;Parent=gene-D5F92_RS10110;Dbxref=GenBank:WP_086163334.1;Name=WP_086163334.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646538.1;locus_tag=D5F92_RS10110;product=type I DNA topoisomerase;protein_id=WP_086163334.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 29246 30088 . - . ID=gene-D5F92_RS10115;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=D5F92_RS10115;old_locus_tag=D5F92_10130 NZ_QYTJ01000054.1 Protein Homology CDS 29246 30088 . - 0 ID=cds-WP_001015247.1;Parent=gene-D5F92_RS10115;Dbxref=GenBank:WP_001015247.1;Name=WP_001015247.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015242.1;locus_tag=D5F92_RS10115;product=DNA-processing protein DprA;protein_id=WP_001015247.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 30226 31254 . - . ID=gene-D5F92_RS10120;Name=D5F92_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10120;old_locus_tag=D5F92_10135 NZ_QYTJ01000054.1 Protein Homology CDS 30226 31254 . - 0 ID=cds-WP_086163336.1;Parent=gene-D5F92_RS10120;Dbxref=GenBank:WP_086163336.1;Name=WP_086163336.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162765.1;locus_tag=D5F92_RS10120;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_086163336.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 31316 32077 . - . ID=gene-D5F92_RS10125;Name=D5F92_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10125;old_locus_tag=D5F92_10140 NZ_QYTJ01000054.1 Protein Homology CDS 31316 32077 . - 0 ID=cds-WP_000614756.1;Parent=gene-D5F92_RS10125;Dbxref=GenBank:WP_000614756.1;Name=WP_000614756.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614752.1;locus_tag=D5F92_RS10125;product=iron ABC transporter ATP-binding protein;protein_id=WP_000614756.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 32074 33048 . - . ID=gene-D5F92_RS10130;Name=D5F92_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10130;old_locus_tag=D5F92_10145 NZ_QYTJ01000054.1 Protein Homology CDS 32074 33048 . - 0 ID=cds-WP_000588585.1;Parent=gene-D5F92_RS10130;Dbxref=GenBank:WP_000588585.1;Name=WP_000588585.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649486.1;locus_tag=D5F92_RS10130;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_000588585.1;transl_table=11 NZ_QYTJ01000054.1 RefSeq gene 33045 34007 . - . ID=gene-D5F92_RS10135;Name=D5F92_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10135;old_locus_tag=D5F92_10150 NZ_QYTJ01000054.1 Protein Homology CDS 33045 34007 . - 0 ID=cds-WP_000735584.1;Parent=gene-D5F92_RS10135;Dbxref=GenBank:WP_000735584.1;Name=WP_000735584.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735591.1;locus_tag=D5F92_RS10135;product=ABC transporter permease;protein_id=WP_000735584.1;transl_table=11 ##sequence-region NZ_QYTJ01000055.1 1 7465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000055.1 RefSeq region 1 7465 . + . ID=NZ_QYTJ01000055.1:1..7465;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000055.1 RefSeq gene 272 691 . + . ID=gene-D5F92_RS10140;Name=D5F92_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10140;old_locus_tag=D5F92_10155 NZ_QYTJ01000055.1 Protein Homology CDS 272 691 . + 0 ID=cds-WP_124749533.1;Parent=gene-D5F92_RS10140;Dbxref=GenBank:WP_124749533.1;Name=WP_124749533.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631690.1;locus_tag=D5F92_RS10140;product=HIT family protein;protein_id=WP_124749533.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 688 984 . + . ID=gene-D5F92_RS10145;Name=D5F92_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10145;old_locus_tag=D5F92_10160 NZ_QYTJ01000055.1 Protein Homology CDS 688 984 . + 0 ID=cds-WP_000690175.1;Parent=gene-D5F92_RS10145;Dbxref=GenBank:WP_000690175.1;Name=WP_000690175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647456.1;locus_tag=D5F92_RS10145;product=hypothetical protein;protein_id=WP_000690175.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 1048 2355 . - . ID=gene-D5F92_RS10150;Name=lytR;gbkey=Gene;gene=lytR;gene_biotype=protein_coding;gene_synonym=brpA;locus_tag=D5F92_RS10150;old_locus_tag=D5F92_10165 NZ_QYTJ01000055.1 Protein Homology CDS 1048 2355 . - 0 ID=cds-WP_124749191.1;Parent=gene-D5F92_RS10150;Dbxref=GenBank:WP_124749191.1;Name=WP_124749191.1;gbkey=CDS;gene=lytR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708155.1;locus_tag=D5F92_RS10150;product=glycopolymer--peptidoglycan transferase LytR;protein_id=WP_124749191.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 2364 2885 . - . ID=gene-D5F92_RS10155;Name=D5F92_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10155;old_locus_tag=D5F92_10170 NZ_QYTJ01000055.1 Protein Homology CDS 2364 2885 . - 0 ID=cds-WP_000043141.1;Parent=gene-D5F92_RS10155;Dbxref=GenBank:WP_000043141.1;Name=WP_000043141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647017.1;locus_tag=D5F92_RS10155;product=GNAT family N-acetyltransferase;protein_id=WP_000043141.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 2878 3321 . - . ID=gene-D5F92_RS10160;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=D5F92_RS10160;old_locus_tag=D5F92_10175 NZ_QYTJ01000055.1 Protein Homology CDS 2878 3321 . - 0 ID=cds-WP_016502535.1;Parent=gene-D5F92_RS10160;Dbxref=GenBank:WP_016502535.1;Name=WP_016502535.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500161.1;locus_tag=D5F92_RS10160;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_016502535.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 3470 4891 . - . ID=gene-D5F92_RS10165;Name=D5F92_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10165;old_locus_tag=D5F92_10180 NZ_QYTJ01000055.1 Protein Homology CDS 3470 4891 . - 0 ID=cds-WP_016502534.1;Parent=gene-D5F92_RS10165;Dbxref=GenBank:WP_016502534.1;Name=WP_016502534.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410401.1;locus_tag=D5F92_RS10165;product=NCS2 family permease;protein_id=WP_016502534.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 4994 5605 . - . ID=gene-D5F92_RS10170;Name=D5F92_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10170;old_locus_tag=D5F92_10185 NZ_QYTJ01000055.1 Protein Homology CDS 4994 5605 . - 0 ID=cds-WP_000865226.1;Parent=gene-D5F92_RS10170;Dbxref=GenBank:WP_000865226.1;Name=WP_000865226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865224.1;locus_tag=D5F92_RS10170;product=DUF1361 domain-containing protein;protein_id=WP_000865226.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 5695 6279 . - . ID=gene-D5F92_RS10175;Name=D5F92_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10175;old_locus_tag=D5F92_10190 NZ_QYTJ01000055.1 Protein Homology CDS 5695 6279 . - 0 ID=cds-WP_000734042.1;Parent=gene-D5F92_RS10175;Dbxref=GenBank:WP_000734042.1;Name=WP_000734042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734041.1;locus_tag=D5F92_RS10175;product=hypothetical protein;protein_id=WP_000734042.1;transl_table=11 NZ_QYTJ01000055.1 RefSeq gene 6368 7180 . + . ID=gene-D5F92_RS10180;Name=D5F92_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10180;old_locus_tag=D5F92_10195 NZ_QYTJ01000055.1 Protein Homology CDS 6368 7180 . + 0 ID=cds-WP_016502532.1;Parent=gene-D5F92_RS10180;Dbxref=GenBank:WP_016502532.1;Name=WP_016502532.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162329.1;locus_tag=D5F92_RS10180;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016502532.1;transl_table=11 ##sequence-region NZ_QYTJ01000056.1 1 8211 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000056.1 RefSeq region 1 8211 . + . ID=NZ_QYTJ01000056.1:1..8211;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000056.1 RefSeq gene 122 1249 . + . ID=gene-D5F92_RS10185;Name=D5F92_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10185;old_locus_tag=D5F92_10200 NZ_QYTJ01000056.1 Protein Homology CDS 122 1249 . + 0 ID=cds-WP_000547446.1;Parent=gene-D5F92_RS10185;Dbxref=GenBank:WP_000547446.1;Name=WP_000547446.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547442.1;locus_tag=D5F92_RS10185;product=cation:proton antiporter;protein_id=WP_000547446.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 1313 2275 . - . ID=gene-D5F92_RS10190;Name=D5F92_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10190;old_locus_tag=D5F92_10205 NZ_QYTJ01000056.1 Protein Homology CDS 1313 2275 . - 0 ID=cds-WP_000023418.1;Parent=gene-D5F92_RS10190;Dbxref=GenBank:WP_000023418.1;Name=WP_000023418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766755.1;locus_tag=D5F92_RS10190;product=DUF1002 domain-containing protein;protein_id=WP_000023418.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 2429 2842 . - . ID=gene-D5F92_RS10195;Name=gloA2;gbkey=Gene;gene=gloA2;gene_biotype=protein_coding;locus_tag=D5F92_RS10195;old_locus_tag=D5F92_10210 NZ_QYTJ01000056.1 Protein Homology CDS 2429 2842 . - 0 ID=cds-WP_000767937.1;Parent=gene-D5F92_RS10195;Dbxref=GenBank:WP_000767937.1;Name=WP_000767937.1;gbkey=CDS;gene=gloA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644319.1;locus_tag=D5F92_RS10195;product=SMU1112c/YaeR family gloxylase I-like metalloprotein;protein_id=WP_000767937.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 2858 3601 . - . ID=gene-D5F92_RS10200;Name=D5F92_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10200;old_locus_tag=D5F92_10215 NZ_QYTJ01000056.1 Protein Homology CDS 2858 3601 . - 0 ID=cds-WP_001244682.1;Parent=gene-D5F92_RS10200;Dbxref=GenBank:WP_001244682.1;Name=WP_001244682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649516.1;locus_tag=D5F92_RS10200;product=class A sortase;protein_id=WP_001244682.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 3608 6067 . - . ID=gene-D5F92_RS10205;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=D5F92_RS10205;old_locus_tag=D5F92_10220 NZ_QYTJ01000056.1 Protein Homology CDS 3608 6067 . - 0 ID=cds-WP_001152981.1;Parent=gene-D5F92_RS10205;Dbxref=GenBank:WP_001152981.1;Name=WP_001152981.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767485.1;locus_tag=D5F92_RS10205;product=DNA gyrase subunit A;protein_id=WP_001152981.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 6306 7295 . + . ID=gene-D5F92_RS10210;Name=D5F92_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10210;old_locus_tag=D5F92_10225 NZ_QYTJ01000056.1 Protein Homology CDS 6306 7295 . + 0 ID=cds-WP_124749375.1;Parent=gene-D5F92_RS10210;Dbxref=GenBank:WP_124749375.1;Name=WP_124749375.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768616.1;locus_tag=D5F92_RS10210;product=L-lactate dehydrogenase;protein_id=WP_124749375.1;transl_table=11 NZ_QYTJ01000056.1 RefSeq gene 7416 8211 . - . ID=gene-D5F92_RS10215;Name=D5F92_RS10215;end_range=8211,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10215;old_locus_tag=D5F92_10230;partial=true NZ_QYTJ01000056.1 Protein Homology CDS 7416 8211 . - 1 ID=cds-WP_185690648.1;Parent=gene-D5F92_RS10215;Dbxref=GenBank:WP_185690648.1;Name=WP_185690648.1;Ontology_term=GO:0016491;end_range=8211,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029747.1;locus_tag=D5F92_RS10215;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_185690648.1;transl_table=11 ##sequence-region NZ_QYTJ01000057.1 1 56096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000057.1 RefSeq region 1 56096 . + . ID=NZ_QYTJ01000057.1:1..56096;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000057.1 RefSeq gene 209 1405 . + . ID=gene-D5F92_RS10220;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D5F92_RS10220;old_locus_tag=D5F92_10235 NZ_QYTJ01000057.1 Protein Homology CDS 209 1405 . + 0 ID=cds-WP_001040730.1;Parent=gene-D5F92_RS10220;Dbxref=GenBank:WP_001040730.1;Name=WP_001040730.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=D5F92_RS10220;product=elongation factor Tu;protein_id=WP_001040730.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 1586 2344 . + . ID=gene-D5F92_RS10225;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=D5F92_RS10225;old_locus_tag=D5F92_10240 NZ_QYTJ01000057.1 Protein Homology CDS 1586 2344 . + 0 ID=cds-WP_000087883.1;Parent=gene-D5F92_RS10225;Dbxref=GenBank:WP_000087883.1;Name=WP_000087883.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087908.1;locus_tag=D5F92_RS10225;product=triose-phosphate isomerase;protein_id=WP_000087883.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 2521 3213 . + . ID=gene-D5F92_RS10230;Name=D5F92_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10230;old_locus_tag=D5F92_10245 NZ_QYTJ01000057.1 Protein Homology CDS 2521 3213 . + 0 ID=cds-WP_000240135.1;Parent=gene-D5F92_RS10230;Dbxref=GenBank:WP_000240135.1;Name=WP_000240135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018029419.1;locus_tag=D5F92_RS10230;product=phosphoglycerate mutase;protein_id=WP_000240135.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 3342 5387 . + . ID=gene-D5F92_RS10235;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=D5F92_RS10235;old_locus_tag=D5F92_10250 NZ_QYTJ01000057.1 Protein Homology CDS 3342 5387 . + 0 ID=cds-WP_086163303.1;Parent=gene-D5F92_RS10235;Dbxref=GenBank:WP_086163303.1;Name=WP_086163303.1;Ontology_term=GO:0009252,GO:0008658,GO:0071972;gbkey=CDS;gene=pbp2b;go_function=penicillin binding|0008658||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934659.1;locus_tag=D5F92_RS10235;product=penicillin-binding protein PBP2B;protein_id=WP_086163303.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 5402 5998 . + . ID=gene-D5F92_RS10240;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=D5F92_RS10240;old_locus_tag=D5F92_10255 NZ_QYTJ01000057.1 Protein Homology CDS 5402 5998 . + 0 ID=cds-WP_000966735.1;Parent=gene-D5F92_RS10240;Dbxref=GenBank:WP_000966735.1;Name=WP_000966735.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=D5F92_RS10240;product=recombination mediator RecR;protein_id=WP_000966735.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 6139 7185 . + . ID=gene-D5F92_RS10245;Name=D5F92_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10245;old_locus_tag=D5F92_10260 NZ_QYTJ01000057.1 Protein Homology CDS 6139 7185 . + 0 ID=cds-WP_000032510.1;Parent=gene-D5F92_RS10245;Dbxref=GenBank:WP_000032510.1;Name=WP_000032510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480637.1;locus_tag=D5F92_RS10245;product=D-alanine--D-alanine ligase;protein_id=WP_000032510.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 7332 8699 . + . ID=gene-D5F92_RS10250;Name=D5F92_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10250;old_locus_tag=D5F92_10265 NZ_QYTJ01000057.1 Protein Homology CDS 7332 8699 . + 0 ID=cds-WP_000777522.1;Parent=gene-D5F92_RS10250;Dbxref=GenBank:WP_000777522.1;Name=WP_000777522.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647798.1;locus_tag=D5F92_RS10250;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000777522.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 8885 10105 . + . ID=gene-D5F92_RS10255;Name=D5F92_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10255;old_locus_tag=D5F92_10270 NZ_QYTJ01000057.1 Protein Homology CDS 8885 10105 . + 0 ID=cds-WP_000793484.1;Parent=gene-D5F92_RS10255;Dbxref=GenBank:WP_000793484.1;Name=WP_000793484.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793481.1;locus_tag=D5F92_RS10255;product=L-lactate MFS transporter;protein_id=WP_000793484.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 10233 10919 . + . ID=gene-D5F92_RS10260;Name=D5F92_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10260;old_locus_tag=D5F92_10275 NZ_QYTJ01000057.1 Protein Homology CDS 10233 10919 . + 0 ID=cds-WP_016502784.1;Parent=gene-D5F92_RS10260;Dbxref=GenBank:WP_016502784.1;Name=WP_016502784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569015.1;locus_tag=D5F92_RS10260;product=YwaF family protein;protein_id=WP_016502784.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 11099 12637 . + . ID=gene-D5F92_RS10265;Name=D5F92_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10265;old_locus_tag=D5F92_10280 NZ_QYTJ01000057.1 Protein Homology CDS 11099 12637 . + 0 ID=cds-WP_086163304.1;Parent=gene-D5F92_RS10265;Dbxref=GenBank:WP_086163304.1;Name=WP_086163304.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043078.1;locus_tag=D5F92_RS10265;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_086163304.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 12814 14358 . + . ID=gene-D5F92_RS10270;Name=D5F92_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10270;old_locus_tag=D5F92_10285 NZ_QYTJ01000057.1 Protein Homology CDS 12814 14358 . + 0 ID=cds-WP_016502786.1;Parent=gene-D5F92_RS10270;Dbxref=GenBank:WP_016502786.1;Name=WP_016502786.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=D5F92_RS10270;product=peptide chain release factor 3;protein_id=WP_016502786.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 14444 14824 . + . ID=gene-D5F92_RS10275;Name=D5F92_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10275;old_locus_tag=D5F92_10290 NZ_QYTJ01000057.1 Protein Homology CDS 14444 14824 . + 0 ID=cds-WP_016502787.1;Parent=gene-D5F92_RS10275;Dbxref=GenBank:WP_016502787.1;Name=WP_016502787.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502787.1;locus_tag=D5F92_RS10275;product=PH domain-containing protein;protein_id=WP_016502787.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 14945 15679 . + . ID=gene-D5F92_RS10280;Name=D5F92_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10280;old_locus_tag=D5F92_10295 NZ_QYTJ01000057.1 Protein Homology CDS 14945 15679 . + 0 ID=cds-WP_000582850.1;Parent=gene-D5F92_RS10280;Dbxref=GenBank:WP_000582850.1;Name=WP_000582850.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480643.1;locus_tag=D5F92_RS10280;product=ATP-binding cassette domain-containing protein;protein_id=WP_000582850.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 15672 16334 . + . ID=gene-D5F92_RS10285;Name=D5F92_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10285;old_locus_tag=D5F92_10300 NZ_QYTJ01000057.1 Protein Homology CDS 15672 16334 . + 0 ID=cds-WP_000565395.1;Parent=gene-D5F92_RS10285;Dbxref=GenBank:WP_000565395.1;Name=WP_000565395.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644638.1;locus_tag=D5F92_RS10285;product=methionine ABC transporter permease;protein_id=WP_000565395.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 16350 17180 . + . ID=gene-D5F92_RS10290;Name=D5F92_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10290;old_locus_tag=D5F92_10305 NZ_QYTJ01000057.1 Protein Homology CDS 16350 17180 . + 0 ID=cds-WP_000735504.1;Parent=gene-D5F92_RS10290;Dbxref=GenBank:WP_000735504.1;Name=WP_000735504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735506.1;locus_tag=D5F92_RS10290;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000735504.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 17415 19001 . + . ID=gene-D5F92_RS10295;Name=D5F92_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10295;old_locus_tag=D5F92_10310 NZ_QYTJ01000057.1 Protein Homology CDS 17415 19001 . + 0 ID=cds-WP_016502789.1;Parent=gene-D5F92_RS10295;Dbxref=GenBank:WP_016502789.1;Name=WP_016502789.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673092.1;locus_tag=D5F92_RS10295;product=DEAD/DEAH box helicase;protein_id=WP_016502789.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 19186 19452 . - . ID=gene-D5F92_RS10300;Name=D5F92_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10300;old_locus_tag=D5F92_10315 NZ_QYTJ01000057.1 Protein Homology CDS 19186 19452 . - 0 ID=cds-WP_000598736.1;Parent=gene-D5F92_RS10300;Dbxref=GenBank:WP_000598736.1;Name=WP_000598736.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598735.1;locus_tag=D5F92_RS10300;product=GIY-YIG nuclease family protein;protein_id=WP_000598736.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 19445 20209 . - . ID=gene-D5F92_RS10305;Name=D5F92_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10305;old_locus_tag=D5F92_10320 NZ_QYTJ01000057.1 Protein Homology CDS 19445 20209 . - 0 ID=cds-WP_000567423.1;Parent=gene-D5F92_RS10305;Dbxref=GenBank:WP_000567423.1;Name=WP_000567423.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567423.1;locus_tag=D5F92_RS10305;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_000567423.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 20344 21084 . + . ID=gene-D5F92_RS10310;Name=D5F92_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10310;old_locus_tag=D5F92_10325 NZ_QYTJ01000057.1 Protein Homology CDS 20344 21084 . + 0 ID=cds-WP_000500220.1;Parent=gene-D5F92_RS10310;Dbxref=GenBank:WP_000500220.1;Name=WP_000500220.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650649.1;locus_tag=D5F92_RS10310;product=lysophospholipid acyltransferase family protein;protein_id=WP_000500220.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 21184 21837 . + . ID=gene-D5F92_RS10315;Name=D5F92_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10315;old_locus_tag=D5F92_10330 NZ_QYTJ01000057.1 Protein Homology CDS 21184 21837 . + 0 ID=cds-WP_000461740.1;Parent=gene-D5F92_RS10315;Dbxref=GenBank:WP_000461740.1;Name=WP_000461740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461745.1;locus_tag=D5F92_RS10315;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000461740.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 21821 24058 . + . ID=gene-D5F92_RS10320;Name=D5F92_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10320;old_locus_tag=D5F92_10335 NZ_QYTJ01000057.1 Protein Homology CDS 21821 24058 . + 0 ID=cds-WP_124749194.1;Parent=gene-D5F92_RS10320;Dbxref=GenBank:WP_124749194.1;Name=WP_124749194.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000939917.1;locus_tag=D5F92_RS10320;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_124749194.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 24184 24993 . + . ID=gene-D5F92_RS10325;Name=D5F92_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10325;old_locus_tag=D5F92_10340 NZ_QYTJ01000057.1 Protein Homology CDS 24184 24993 . + 0 ID=cds-WP_124749356.1;Parent=gene-D5F92_RS10325;Dbxref=GenBank:WP_124749356.1;Name=WP_124749356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153214.1;locus_tag=D5F92_RS10325;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_124749356.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 25004 25948 . + . ID=gene-D5F92_RS10330;Name=D5F92_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10330;old_locus_tag=D5F92_10345 NZ_QYTJ01000057.1 Protein Homology CDS 25004 25948 . + 0 ID=cds-WP_000200830.1;Parent=gene-D5F92_RS10330;Dbxref=GenBank:WP_000200830.1;Name=WP_000200830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754201.1;locus_tag=D5F92_RS10330;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000200830.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 26007 26999 . - . ID=gene-D5F92_RS10335;Name=D5F92_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10335;old_locus_tag=D5F92_10350 NZ_QYTJ01000057.1 Protein Homology CDS 26007 26999 . - 0 ID=cds-WP_000800993.1;Parent=gene-D5F92_RS10335;Dbxref=GenBank:WP_000800993.1;Name=WP_000800993.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647477.1;locus_tag=D5F92_RS10335;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_000800993.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 27174 27902 . + . ID=gene-D5F92_RS10340;Name=D5F92_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10340;old_locus_tag=D5F92_10355 NZ_QYTJ01000057.1 Protein Homology CDS 27174 27902 . + 0 ID=cds-WP_016502794.1;Parent=gene-D5F92_RS10340;Dbxref=GenBank:WP_016502794.1;Name=WP_016502794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468969.1;locus_tag=D5F92_RS10340;product=methyltransferase domain-containing protein;protein_id=WP_016502794.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 27956 28993 . + . ID=gene-D5F92_RS10345;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=D5F92_RS10345;old_locus_tag=D5F92_10360 NZ_QYTJ01000057.1 Protein Homology CDS 27956 28993 . + 0 ID=cds-WP_000560292.1;Parent=gene-D5F92_RS10345;Dbxref=GenBank:WP_000560292.1;Name=WP_000560292.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560289.1;locus_tag=D5F92_RS10345;product=DNA polymerase III subunit delta;protein_id=WP_000560292.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 29073 29681 . + . ID=gene-D5F92_RS10350;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=D5F92_RS10350;old_locus_tag=D5F92_10365 NZ_QYTJ01000057.1 Protein Homology CDS 29073 29681 . + 0 ID=cds-WP_000974719.1;Parent=gene-D5F92_RS10350;Dbxref=GenBank:WP_000974719.1;Name=WP_000974719.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974722.1;locus_tag=D5F92_RS10350;product=superoxide dismutase SodA;protein_id=WP_000974719.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 30019 30870 . + . ID=gene-D5F92_RS10355;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=D5F92_RS10355;old_locus_tag=D5F92_10370 NZ_QYTJ01000057.1 Protein Homology CDS 30019 30870 . + 0 ID=cds-WP_000584610.1;Parent=gene-D5F92_RS10355;Dbxref=GenBank:WP_000584610.1;Name=WP_000584610.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=licT;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649835.1;locus_tag=D5F92_RS10355;product=BglG family transcription antiterminator LicT;protein_id=WP_000584610.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 30863 32731 . + . ID=gene-D5F92_RS10360;Name=D5F92_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10360;old_locus_tag=D5F92_10375 NZ_QYTJ01000057.1 Protein Homology CDS 30863 32731 . + 0 ID=cds-WP_016502795.1;Parent=gene-D5F92_RS10360;Dbxref=GenBank:WP_016502795.1;Name=WP_016502795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170539.1;locus_tag=D5F92_RS10360;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=WP_016502795.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 32748 34175 . + . ID=gene-D5F92_RS10365;Name=D5F92_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10365;old_locus_tag=D5F92_10380 NZ_QYTJ01000057.1 Protein Homology CDS 32748 34175 . + 0 ID=cds-WP_016502796.1;Parent=gene-D5F92_RS10365;Dbxref=GenBank:WP_016502796.1;Name=WP_016502796.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650878.1;locus_tag=D5F92_RS10365;product=glycoside hydrolase family 1 protein;protein_id=WP_016502796.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 34243 35337 . - . ID=gene-D5F92_RS10370;Name=D5F92_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10370;old_locus_tag=D5F92_10385 NZ_QYTJ01000057.1 Protein Homology CDS 34243 35337 . - 0 ID=cds-WP_000776696.1;Parent=gene-D5F92_RS10370;Dbxref=GenBank:WP_000776696.1;Name=WP_000776696.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776693.1;locus_tag=D5F92_RS10370;product=CdaR family transcriptional regulator;protein_id=WP_000776696.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 35504 36646 . + . ID=gene-D5F92_RS10375;Name=D5F92_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10375;old_locus_tag=D5F92_10390 NZ_QYTJ01000057.1 Protein Homology CDS 35504 36646 . + 0 ID=cds-WP_016502797.1;Parent=gene-D5F92_RS10375;Dbxref=GenBank:WP_016502797.1;Name=WP_016502797.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869902.1;locus_tag=D5F92_RS10375;product=glycerate kinase family protein;protein_id=WP_016502797.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 36671 37927 . + . ID=gene-D5F92_RS10380;Name=D5F92_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10380;old_locus_tag=D5F92_10395 NZ_QYTJ01000057.1 Protein Homology CDS 36671 37927 . + 0 ID=cds-WP_000388406.1;Parent=gene-D5F92_RS10380;Dbxref=GenBank:WP_000388406.1;Name=WP_000388406.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480657.1;locus_tag=D5F92_RS10380;product=GntP family permease;protein_id=WP_000388406.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 38028 39092 . + . ID=gene-D5F92_RS10385;Name=D5F92_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10385;old_locus_tag=D5F92_10400 NZ_QYTJ01000057.1 Protein Homology CDS 38028 39092 . + 0 ID=cds-WP_000814871.1;Parent=gene-D5F92_RS10385;Dbxref=GenBank:WP_000814871.1;Name=WP_000814871.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643861.1;locus_tag=D5F92_RS10385;product=serine hydrolase;protein_id=WP_000814871.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 39147 39590 . - . ID=gene-D5F92_RS10390;Name=D5F92_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10390;old_locus_tag=D5F92_10405 NZ_QYTJ01000057.1 Protein Homology CDS 39147 39590 . - 0 ID=cds-WP_124749155.1;Parent=gene-D5F92_RS10390;Dbxref=GenBank:WP_124749155.1;Name=WP_124749155.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502799.1;locus_tag=D5F92_RS10390;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_124749155.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 39671 40699 . - . ID=gene-D5F92_RS10395;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=D5F92_RS10395;old_locus_tag=D5F92_10410 NZ_QYTJ01000057.1 Protein Homology CDS 39671 40699 . - 0 ID=cds-WP_016480659.1;Parent=gene-D5F92_RS10395;Dbxref=GenBank:WP_016480659.1;Name=WP_016480659.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646165.1;locus_tag=D5F92_RS10395;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_016480659.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 40852 41532 . + . ID=gene-D5F92_RS10400;Name=D5F92_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10400;old_locus_tag=D5F92_10415 NZ_QYTJ01000057.1 Protein Homology CDS 40852 41532 . + 0 ID=cds-WP_000656582.1;Parent=gene-D5F92_RS10400;Dbxref=GenBank:WP_000656582.1;Name=WP_000656582.1;Ontology_term=GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656576.1;locus_tag=D5F92_RS10400;product=VIT1/CCC1 transporter family protein;protein_id=WP_000656582.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 41682 42383 . + . ID=gene-D5F92_RS10405;Name=D5F92_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10405;old_locus_tag=D5F92_10420 NZ_QYTJ01000057.1 Protein Homology CDS 41682 42383 . + 0 ID=cds-WP_001263957.1;Parent=gene-D5F92_RS10405;Dbxref=GenBank:WP_001263957.1;Name=WP_001263957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263956.1;locus_tag=D5F92_RS10405;product=glucosamine-6-phosphate deaminase;protein_id=WP_001263957.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 42455 43411 . - . ID=gene-D5F92_RS10410;Name=D5F92_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10410;old_locus_tag=D5F92_10425 NZ_QYTJ01000057.1 Protein Homology CDS 42455 43411 . - 0 ID=cds-WP_000523783.1;Parent=gene-D5F92_RS10410;Dbxref=GenBank:WP_000523783.1;Name=WP_000523783.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523788.1;locus_tag=D5F92_RS10410;product=glutathione S-transferase family protein;protein_id=WP_000523783.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 43507 44226 . + . ID=gene-D5F92_RS10415;Name=D5F92_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10415;old_locus_tag=D5F92_10430 NZ_QYTJ01000057.1 Protein Homology CDS 43507 44226 . + 0 ID=cds-WP_001234960.1;Parent=gene-D5F92_RS10415;Dbxref=GenBank:WP_001234960.1;Name=WP_001234960.1;Ontology_term=GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234955.1;locus_tag=D5F92_RS10415;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_001234960.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 44299 45450 . + . ID=gene-D5F92_RS10425;Name=D5F92_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10425;old_locus_tag=D5F92_10440 NZ_QYTJ01000057.1 Protein Homology CDS 44299 45450 . + 0 ID=cds-WP_016502801.1;Parent=gene-D5F92_RS10425;Dbxref=GenBank:WP_016502801.1;Name=WP_016502801.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771524.1;locus_tag=D5F92_RS10425;product=MFS transporter;protein_id=WP_016502801.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 45502 46449 . + . ID=gene-D5F92_RS10430;Name=D5F92_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10430;old_locus_tag=D5F92_10445 NZ_QYTJ01000057.1 Protein Homology CDS 45502 46449 . + 0 ID=cds-WP_016502802.1;Parent=gene-D5F92_RS10430;Dbxref=GenBank:WP_016502802.1;Name=WP_016502802.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000903651.1;locus_tag=D5F92_RS10430;product=competence protein CoiA;protein_id=WP_016502802.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 46465 48270 . + . ID=gene-D5F92_RS10435;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=D5F92_RS10435;old_locus_tag=D5F92_10450 NZ_QYTJ01000057.1 Protein Homology CDS 46465 48270 . + 0 ID=cds-WP_016502803.1;Parent=gene-D5F92_RS10435;Dbxref=GenBank:WP_016502803.1;Name=WP_016502803.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282903.1;locus_tag=D5F92_RS10435;product=oligoendopeptidase F;protein_id=WP_016502803.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 48465 49091 . + . ID=gene-D5F92_RS10440;Name=D5F92_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10440;old_locus_tag=D5F92_10455 NZ_QYTJ01000057.1 Protein Homology CDS 48465 49091 . + 0 ID=cds-WP_000736936.1;Parent=gene-D5F92_RS10440;Dbxref=GenBank:WP_000736936.1;Name=WP_000736936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771772.1;locus_tag=D5F92_RS10440;product=HAD hydrolase-like protein;protein_id=WP_000736936.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 49165 49872 . + . ID=gene-D5F92_RS10445;Name=D5F92_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10445;old_locus_tag=D5F92_10460 NZ_QYTJ01000057.1 Protein Homology CDS 49165 49872 . + 0 ID=cds-WP_000250853.1;Parent=gene-D5F92_RS10445;Dbxref=GenBank:WP_000250853.1;Name=WP_000250853.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650688.1;locus_tag=D5F92_RS10445;product=O-methyltransferase;protein_id=WP_000250853.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 49933 50862 . + . ID=gene-D5F92_RS10450;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=D5F92_RS10450;old_locus_tag=D5F92_10465 NZ_QYTJ01000057.1 Protein Homology CDS 49933 50862 . + 0 ID=cds-WP_000857817.1;Parent=gene-D5F92_RS10450;Dbxref=GenBank:WP_000857817.1;Name=WP_000857817.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857824.1;locus_tag=D5F92_RS10450;product=peptidylprolyl isomerase PrsA;protein_id=WP_000857817.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 51104 51589 . + . ID=gene-D5F92_RS10455;Name=D5F92_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10455;old_locus_tag=D5F92_10470 NZ_QYTJ01000057.1 Protein Homology CDS 51104 51589 . + 0 ID=cds-WP_000190196.1;Parent=gene-D5F92_RS10455;Dbxref=GenBank:WP_000190196.1;Name=WP_000190196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767250.1;locus_tag=D5F92_RS10455;product=LURP-one-related/scramblase family protein;protein_id=WP_000190196.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 51605 54223 . + . ID=gene-D5F92_RS10460;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=D5F92_RS10460;old_locus_tag=D5F92_10475 NZ_QYTJ01000057.1 Protein Homology CDS 51605 54223 . + 0 ID=cds-WP_016502804.1;Parent=gene-D5F92_RS10460;Dbxref=GenBank:WP_016502804.1;Name=WP_016502804.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661542.1;locus_tag=D5F92_RS10460;product=alanine--tRNA ligase;protein_id=WP_016502804.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 54305 55021 . + . ID=gene-D5F92_RS10465;Name=D5F92_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10465;old_locus_tag=D5F92_10480 NZ_QYTJ01000057.1 Protein Homology CDS 54305 55021 . + 0 ID=cds-WP_000232924.1;Parent=gene-D5F92_RS10465;Dbxref=GenBank:WP_000232924.1;Name=WP_000232924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232920.1;locus_tag=D5F92_RS10465;product=DUF554 domain-containing protein;protein_id=WP_000232924.1;transl_table=11 NZ_QYTJ01000057.1 RefSeq gene 55109 55927 . + . ID=gene-D5F92_RS10470;Name=D5F92_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10470;old_locus_tag=D5F92_10485 NZ_QYTJ01000057.1 Protein Homology CDS 55109 55927 . + 0 ID=cds-WP_001050374.1;Parent=gene-D5F92_RS10470;Dbxref=GenBank:WP_001050374.1;Name=WP_001050374.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050370.1;locus_tag=D5F92_RS10470;product=glycosyltransferase family 8 protein;protein_id=WP_001050374.1;transl_table=11 ##sequence-region NZ_QYTJ01000058.1 1 23492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000058.1 RefSeq region 1 23492 . + . ID=NZ_QYTJ01000058.1:1..23492;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000058.1 RefSeq pseudogene 1 419 . - . ID=gene-D5F92_RS10475;Name=D5F92_RS10475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10475;old_locus_tag=D5F92_10490;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000058.1 Protein Homology CDS 1 419 . - 0 ID=cds-D5F92_RS10475;Parent=gene-D5F92_RS10475;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS10475;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000058.1 RefSeq pseudogene 498 710 . + . ID=gene-D5F92_RS10480;Name=D5F92_RS10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10480;old_locus_tag=D5F92_10495;partial=true;pseudo=true;start_range=.,498 NZ_QYTJ01000058.1 Protein Homology CDS 498 710 . + 0 ID=cds-D5F92_RS10480;Parent=gene-D5F92_RS10480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689173.1;locus_tag=D5F92_RS10480;partial=true;product=Maf family protein;pseudo=true;start_range=.,498;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 784 1482 . + . ID=gene-D5F92_RS10485;Name=D5F92_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10485;old_locus_tag=D5F92_10500 NZ_QYTJ01000058.1 Protein Homology CDS 784 1482 . + 0 ID=cds-WP_041165668.1;Parent=gene-D5F92_RS10485;Dbxref=GenBank:WP_041165668.1;Name=WP_041165668.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291485.1;locus_tag=D5F92_RS10485;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_041165668.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 1700 2368 . + . ID=gene-D5F92_RS10490;Name=D5F92_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10490;old_locus_tag=D5F92_10505 NZ_QYTJ01000058.1 Protein Homology CDS 1700 2368 . + 0 ID=cds-WP_016480576.1;Parent=gene-D5F92_RS10490;Dbxref=GenBank:WP_016480576.1;Name=WP_016480576.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480576.1;locus_tag=D5F92_RS10490;product=response regulator transcription factor;protein_id=WP_016480576.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 2358 2957 . + . ID=gene-D5F92_RS10495;Name=D5F92_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10495;old_locus_tag=D5F92_10510 NZ_QYTJ01000058.1 Protein Homology CDS 2358 2957 . + 0 ID=cds-WP_242367465.1;Parent=gene-D5F92_RS10495;Dbxref=GenBank:WP_242367465.1;Name=WP_242367465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480577.1;locus_tag=D5F92_RS10495;product=sensor protein;protein_id=WP_242367465.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 2963 3487 . + . ID=gene-D5F92_RS10500;Name=D5F92_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10500;old_locus_tag=D5F92_10515 NZ_QYTJ01000058.1 Protein Homology CDS 2963 3487 . + 0 ID=cds-WP_016480578.1;Parent=gene-D5F92_RS10500;Dbxref=GenBank:WP_016480578.1;Name=WP_016480578.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480578.1;locus_tag=D5F92_RS10500;product=sensor histidine kinase;protein_id=WP_016480578.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 3896 4201 . + . ID=gene-D5F92_RS10505;Name=D5F92_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10505;old_locus_tag=D5F92_10520 NZ_QYTJ01000058.1 Protein Homology CDS 3896 4201 . + 0 ID=cds-WP_016480579.1;Parent=gene-D5F92_RS10505;Dbxref=GenBank:WP_016480579.1;Name=WP_016480579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533774.1;locus_tag=D5F92_RS10505;product=hypothetical protein;protein_id=WP_016480579.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 4201 5049 . + . ID=gene-D5F92_RS10510;Name=D5F92_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10510;old_locus_tag=D5F92_10525 NZ_QYTJ01000058.1 Protein Homology CDS 4201 5049 . + 0 ID=cds-WP_016480580.1;Parent=gene-D5F92_RS10510;Dbxref=GenBank:WP_016480580.1;Name=WP_016480580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859502.1;locus_tag=D5F92_RS10510;product=hypothetical protein;protein_id=WP_016480580.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 5046 5768 . + . ID=gene-D5F92_RS10515;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=D5F92_RS10515;old_locus_tag=D5F92_10530 NZ_QYTJ01000058.1 Protein Homology CDS 5046 5768 . + 0 ID=cds-WP_016480581.1;Parent=gene-D5F92_RS10515;Dbxref=GenBank:WP_016480581.1;Name=WP_016480581.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861304.1;locus_tag=D5F92_RS10515;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_016480581.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 5761 6066 . + . ID=gene-D5F92_RS10520;Name=D5F92_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10520;old_locus_tag=D5F92_10535 NZ_QYTJ01000058.1 Protein Homology CDS 5761 6066 . + 0 ID=cds-WP_000611494.1;Parent=gene-D5F92_RS10520;Dbxref=GenBank:WP_000611494.1;Name=WP_000611494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646925.1;locus_tag=D5F92_RS10520;product=phosphopantetheine-binding protein;protein_id=WP_000611494.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 6050 6526 . + . ID=gene-D5F92_RS10525;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=D5F92_RS10525;old_locus_tag=D5F92_10540 NZ_QYTJ01000058.1 Protein Homology CDS 6050 6526 . + 0 ID=cds-WP_041165669.1;Parent=gene-D5F92_RS10525;Dbxref=GenBank:WP_041165669.1;Name=WP_041165669.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164166.1;locus_tag=D5F92_RS10525;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_041165669.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 6516 7445 . + . ID=gene-D5F92_RS10530;Name=D5F92_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10530;old_locus_tag=D5F92_10545 NZ_QYTJ01000058.1 Protein Homology CDS 6516 7445 . + 0 ID=cds-WP_000403525.1;Parent=gene-D5F92_RS10530;Dbxref=GenBank:WP_000403525.1;Name=WP_000403525.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403526.1;locus_tag=D5F92_RS10530;product=ABC transporter ATP-binding protein;protein_id=WP_000403525.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 7438 8316 . + . ID=gene-D5F92_RS10535;Name=D5F92_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10535;old_locus_tag=D5F92_10550 NZ_QYTJ01000058.1 Protein Homology CDS 7438 8316 . + 0 ID=cds-WP_086163281.1;Parent=gene-D5F92_RS10535;Dbxref=GenBank:WP_086163281.1;Name=WP_086163281.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462408.1;locus_tag=D5F92_RS10535;product=ABC transporter permease;protein_id=WP_086163281.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 8313 10313 . + . ID=gene-D5F92_RS10540;Name=D5F92_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10540;old_locus_tag=D5F92_10555 NZ_QYTJ01000058.1 Protein Homology CDS 8313 10313 . + 0 ID=cds-WP_124749111.1;Parent=gene-D5F92_RS10540;Dbxref=GenBank:WP_124749111.1;Name=WP_124749111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768304.1;locus_tag=D5F92_RS10540;product=cylE protein;protein_id=WP_124749111.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 10310 11263 . + . ID=gene-D5F92_RS10545;Name=D5F92_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10545;old_locus_tag=D5F92_10560 NZ_QYTJ01000058.1 Protein Homology CDS 10310 11263 . + 0 ID=cds-WP_016480585.1;Parent=gene-D5F92_RS10545;Dbxref=GenBank:WP_016480585.1;Name=WP_016480585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647596.1;locus_tag=D5F92_RS10545;product=aminomethyltransferase family protein;protein_id=WP_016480585.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 11260 13455 . + . ID=gene-D5F92_RS10550;Name=D5F92_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10550;old_locus_tag=D5F92_10565 NZ_QYTJ01000058.1 Protein Homology CDS 11260 13455 . + 0 ID=cds-WP_016502741.1;Parent=gene-D5F92_RS10550;Dbxref=GenBank:WP_016502741.1;Name=WP_016502741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118219.1;locus_tag=D5F92_RS10550;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_016502741.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 13460 14671 . + . ID=gene-D5F92_RS10555;Name=cylJ;gbkey=Gene;gene=cylJ;gene_biotype=protein_coding;locus_tag=D5F92_RS10555;old_locus_tag=D5F92_10570 NZ_QYTJ01000058.1 Protein Homology CDS 13460 14671 . + 0 ID=cds-WP_016502742.1;Parent=gene-D5F92_RS10555;Dbxref=GenBank:WP_016502742.1;Name=WP_016502742.1;gbkey=CDS;gene=cylJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033001.1;locus_tag=D5F92_RS10555;product=glycosyltransferase CylJ;protein_id=WP_016502742.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 14640 15215 . + . ID=gene-D5F92_RS10560;Name=D5F92_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10560;old_locus_tag=D5F92_10575 NZ_QYTJ01000058.1 Protein Homology CDS 14640 15215 . + 0 ID=cds-WP_016502743.1;Parent=gene-D5F92_RS10560;Dbxref=GenBank:WP_016502743.1;Name=WP_016502743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068959.1;locus_tag=D5F92_RS10560;product=hypothetical protein;protein_id=WP_016502743.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 15558 15899 . + . ID=gene-D5F92_RS10565;Name=D5F92_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10565;old_locus_tag=D5F92_10580 NZ_QYTJ01000058.1 Protein Homology CDS 15558 15899 . + 0 ID=cds-WP_001288728.1;Parent=gene-D5F92_RS10565;Dbxref=GenBank:WP_001288728.1;Name=WP_001288728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288733.1;locus_tag=D5F92_RS10565;product=hypothetical protein;protein_id=WP_001288728.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq gene 15933 22631 . + . ID=gene-D5F92_RS10570;Name=D5F92_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10570;old_locus_tag=D5F92_10585 NZ_QYTJ01000058.1 Protein Homology CDS 15933 22631 . + 0 ID=cds-WP_124785529.1;Parent=gene-D5F92_RS10570;Dbxref=GenBank:WP_124785529.1;Name=WP_124785529.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480588.1;locus_tag=D5F92_RS10570;product=S8 family serine peptidase;protein_id=WP_124785529.1;transl_table=11 NZ_QYTJ01000058.1 RefSeq pseudogene 22815 22961 . + . ID=gene-D5F92_RS10575;Name=D5F92_RS10575;end_range=22961,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10575;old_locus_tag=D5F92_10590;partial=true;pseudo=true NZ_QYTJ01000058.1 Protein Homology CDS 22815 22961 . + 0 ID=cds-D5F92_RS10575;Parent=gene-D5F92_RS10575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873818.1;locus_tag=D5F92_RS10575;partial=true;product=neutral endopeptidase;pseudo=true;transl_table=11 NZ_QYTJ01000058.1 RefSeq pseudogene 22996 23457 . - . ID=gene-D5F92_RS10580;Name=D5F92_RS10580;end_range=23457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10580;old_locus_tag=D5F92_10595;partial=true;pseudo=true NZ_QYTJ01000058.1 Protein Homology CDS 22996 23457 . - 0 ID=cds-D5F92_RS10580;Parent=gene-D5F92_RS10580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=23457,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS10580;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000059.1 1 9102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000059.1 RefSeq region 1 9102 . + . ID=NZ_QYTJ01000059.1:1..9102;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000059.1 RefSeq gene 71 1339 . - . ID=gene-D5F92_RS10585;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=D5F92_RS10585;old_locus_tag=D5F92_10600 NZ_QYTJ01000059.1 Protein Homology CDS 71 1339 . - 0 ID=cds-WP_000687014.1;Parent=gene-D5F92_RS10585;Dbxref=GenBank:WP_000687014.1;Name=WP_000687014.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687011.1;locus_tag=D5F92_RS10585;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_000687014.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 1445 4240 . - . ID=gene-D5F92_RS10590;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=D5F92_RS10590;old_locus_tag=D5F92_10605 NZ_QYTJ01000059.1 Protein Homology CDS 1445 4240 . - 0 ID=cds-WP_086163302.1;Parent=gene-D5F92_RS10590;Dbxref=GenBank:WP_086163302.1;Name=WP_086163302.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: protein motif:HMM:NF000584.1;locus_tag=D5F92_RS10590;product=phosphoenolpyruvate carboxylase;protein_id=WP_086163302.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 4449 6248 . + . ID=gene-D5F92_RS10595;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=D5F92_RS10595;old_locus_tag=D5F92_10610 NZ_QYTJ01000059.1 Protein Homology CDS 4449 6248 . + 0 ID=cds-WP_016502779.1;Parent=gene-D5F92_RS10595;Dbxref=GenBank:WP_016502779.1;Name=WP_016502779.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647353.1;locus_tag=D5F92_RS10595;product=oligoendopeptidase F;protein_id=WP_016502779.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 6307 6696 . - . ID=gene-D5F92_RS10600;Name=D5F92_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10600;old_locus_tag=D5F92_10615 NZ_QYTJ01000059.1 Protein Homology CDS 6307 6696 . - 0 ID=cds-WP_016502778.1;Parent=gene-D5F92_RS10600;Dbxref=GenBank:WP_016502778.1;Name=WP_016502778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759944.1;locus_tag=D5F92_RS10600;product=DUF4430 domain-containing protein;protein_id=WP_016502778.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 6680 7204 . - . ID=gene-D5F92_RS10605;Name=D5F92_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10605;old_locus_tag=D5F92_10620 NZ_QYTJ01000059.1 Protein Homology CDS 6680 7204 . - 0 ID=cds-WP_000594806.1;Parent=gene-D5F92_RS10605;Dbxref=GenBank:WP_000594806.1;Name=WP_000594806.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771866.1;locus_tag=D5F92_RS10605;product=ECF transporter S component;protein_id=WP_000594806.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 7361 8209 . + . ID=gene-D5F92_RS10610;Name=D5F92_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10610;old_locus_tag=D5F92_10625 NZ_QYTJ01000059.1 Protein Homology CDS 7361 8209 . + 0 ID=cds-WP_016480630.1;Parent=gene-D5F92_RS10610;Dbxref=GenBank:WP_016480630.1;Name=WP_016480630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254333.1;locus_tag=D5F92_RS10610;product=glycoside hydrolase family 25 protein;protein_id=WP_016480630.1;transl_table=11 NZ_QYTJ01000059.1 RefSeq gene 8242 8859 . - . ID=gene-D5F92_RS10615;Name=D5F92_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10615;old_locus_tag=D5F92_10630 NZ_QYTJ01000059.1 Protein Homology CDS 8242 8859 . - 0 ID=cds-WP_016480629.1;Parent=gene-D5F92_RS10615;Dbxref=GenBank:WP_016480629.1;Name=WP_016480629.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000404311.1;locus_tag=D5F92_RS10615;product=SDR family oxidoreductase;protein_id=WP_016480629.1;transl_table=11 ##sequence-region NZ_QYTJ01000006.1 1 81283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000006.1 RefSeq region 1 81283 . + . ID=NZ_QYTJ01000006.1:1..81283;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000006.1 RefSeq pseudogene 1 869 . + . ID=gene-D5F92_RS00935;Name=D5F92_RS00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00935;old_locus_tag=D5F92_00940;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000006.1 Protein Homology CDS 1 869 . + 0 ID=cds-D5F92_RS00935;Parent=gene-D5F92_RS00935;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS00935;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000006.1 RefSeq pseudogene 913 1487 . - . ID=gene-D5F92_RS00940;Name=D5F92_RS00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS00940;old_locus_tag=D5F92_00945;partial=true;pseudo=true;start_range=.,913 NZ_QYTJ01000006.1 Protein Homology CDS 913 1487 . - 0 ID=cds-D5F92_RS00940;Parent=gene-D5F92_RS00940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643107.1;locus_tag=D5F92_RS00940;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,913;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 1751 2434 . - . ID=gene-D5F92_RS00945;Name=D5F92_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00945;old_locus_tag=D5F92_00950 NZ_QYTJ01000006.1 Protein Homology CDS 1751 2434 . - 0 ID=cds-WP_000359383.1;Parent=gene-D5F92_RS00945;Dbxref=GenBank:WP_000359383.1;Name=WP_000359383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502475.1;locus_tag=D5F92_RS00945;product=hypothetical protein;protein_id=WP_000359383.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 2455 2766 . - . ID=gene-D5F92_RS00950;Name=D5F92_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00950;old_locus_tag=D5F92_00955 NZ_QYTJ01000006.1 Protein Homology CDS 2455 2766 . - 0 ID=cds-WP_000613124.1;Parent=gene-D5F92_RS00950;Dbxref=GenBank:WP_000613124.1;Name=WP_000613124.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613123.1;locus_tag=D5F92_RS00950;product=PadR family transcriptional regulator;protein_id=WP_000613124.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 2958 3665 . + . ID=gene-D5F92_RS00955;Name=D5F92_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00955;old_locus_tag=D5F92_00960 NZ_QYTJ01000006.1 Protein Homology CDS 2958 3665 . + 0 ID=cds-WP_000687006.1;Parent=gene-D5F92_RS00955;Dbxref=GenBank:WP_000687006.1;Name=WP_000687006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001871310.1;locus_tag=D5F92_RS00955;product=hypothetical protein;protein_id=WP_000687006.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 3943 5091 . + . ID=gene-D5F92_RS00960;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=D5F92_RS00960;old_locus_tag=D5F92_00965 NZ_QYTJ01000006.1 Protein Homology CDS 3943 5091 . + 0 ID=cds-WP_000170470.1;Parent=gene-D5F92_RS00960;Dbxref=GenBank:WP_000170470.1;Name=WP_000170470.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170478.1;locus_tag=D5F92_RS00960;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000170470.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 5210 5752 . + . ID=gene-D5F92_RS00965;Name=D5F92_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00965;old_locus_tag=D5F92_00970 NZ_QYTJ01000006.1 Protein Homology CDS 5210 5752 . + 0 ID=cds-WP_000022341.1;Parent=gene-D5F92_RS00965;Dbxref=GenBank:WP_000022341.1;Name=WP_000022341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022342.1;locus_tag=D5F92_RS00965;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_000022341.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 6065 6979 . + . ID=gene-D5F92_RS00970;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=D5F92_RS00970;old_locus_tag=D5F92_00975 NZ_QYTJ01000006.1 Protein Homology CDS 6065 6979 . + 0 ID=cds-WP_000038755.1;Parent=gene-D5F92_RS00970;Dbxref=GenBank:WP_000038755.1;Name=WP_000038755.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038754.1;locus_tag=D5F92_RS00970;product=glycine--tRNA ligase subunit alpha;protein_id=WP_000038755.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 6979 7620 . + . ID=gene-D5F92_RS00975;Name=D5F92_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00975;old_locus_tag=D5F92_00980 NZ_QYTJ01000006.1 Protein Homology CDS 6979 7620 . + 0 ID=cds-WP_016480278.1;Parent=gene-D5F92_RS00975;Dbxref=GenBank:WP_016480278.1;Name=WP_016480278.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094117.1;locus_tag=D5F92_RS00975;product=FMN-dependent NADH-azoreductase;protein_id=WP_016480278.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 7624 9663 . + . ID=gene-D5F92_RS00980;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=D5F92_RS00980;old_locus_tag=D5F92_00985 NZ_QYTJ01000006.1 Protein Homology CDS 7624 9663 . + 0 ID=cds-WP_086163210.1;Parent=gene-D5F92_RS00980;Dbxref=GenBank:WP_086163210.1;Name=WP_086163210.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768433.1;locus_tag=D5F92_RS00980;product=glycine--tRNA ligase subunit beta;protein_id=WP_086163210.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 9675 9932 . + . ID=gene-D5F92_RS00985;Name=D5F92_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00985;old_locus_tag=D5F92_00990 NZ_QYTJ01000006.1 Protein Homology CDS 9675 9932 . + 0 ID=cds-WP_000371297.1;Parent=gene-D5F92_RS00985;Dbxref=GenBank:WP_000371297.1;Name=WP_000371297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983550.1;locus_tag=D5F92_RS00985;product=DUF896 family protein;protein_id=WP_000371297.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 10021 10284 . + . ID=gene-D5F92_RS00990;Name=D5F92_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS00990;old_locus_tag=D5F92_00995 NZ_QYTJ01000006.1 Protein Homology CDS 10021 10284 . + 0 ID=cds-WP_016480280.1;Parent=gene-D5F92_RS00990;Dbxref=GenBank:WP_016480280.1;Name=WP_016480280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571497.1;locus_tag=D5F92_RS00990;product=DUF1294 domain-containing protein;protein_id=WP_016480280.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 10399 11907 . + . ID=gene-D5F92_RS00995;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=D5F92_RS00995;old_locus_tag=D5F92_01000 NZ_QYTJ01000006.1 Protein Homology CDS 10399 11907 . + 0 ID=cds-WP_016502480.1;Parent=gene-D5F92_RS00995;Dbxref=GenBank:WP_016502480.1;Name=WP_016502480.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093523.1;locus_tag=D5F92_RS00995;product=glycerol kinase GlpK;protein_id=WP_016502480.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 11920 13749 . + . ID=gene-D5F92_RS01000;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=D5F92_RS01000;old_locus_tag=D5F92_01005 NZ_QYTJ01000006.1 Protein Homology CDS 11920 13749 . + 0 ID=cds-WP_124749559.1;Parent=gene-D5F92_RS01000;Dbxref=GenBank:WP_124749559.1;Name=WP_124749559.1;Ontology_term=GO:0006072,GO:0004368;gbkey=CDS;gene=glpO;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646203.1;locus_tag=D5F92_RS01000;product=type 1 glycerol-3-phosphate oxidase;protein_id=WP_124749559.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 13761 14459 . + . ID=gene-D5F92_RS01005;Name=D5F92_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01005;old_locus_tag=D5F92_01010 NZ_QYTJ01000006.1 Protein Homology CDS 13761 14459 . + 0 ID=cds-WP_016480283.1;Parent=gene-D5F92_RS01005;Dbxref=GenBank:WP_016480283.1;Name=WP_016480283.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350768.1;locus_tag=D5F92_RS01005;product=MIP/aquaporin family protein;protein_id=WP_016480283.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 14547 15884 . + . ID=gene-D5F92_RS01010;Name=D5F92_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01010;old_locus_tag=D5F92_01015 NZ_QYTJ01000006.1 Protein Homology CDS 14547 15884 . + 0 ID=cds-WP_016480284.1;Parent=gene-D5F92_RS01010;Dbxref=GenBank:WP_016480284.1;Name=WP_016480284.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137245.1;locus_tag=D5F92_RS01010;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016480284.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 15875 17305 . + . ID=gene-D5F92_RS01015;Name=D5F92_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01015;old_locus_tag=D5F92_01020 NZ_QYTJ01000006.1 Protein Homology CDS 15875 17305 . + 0 ID=cds-WP_047199433.1;Parent=gene-D5F92_RS01015;Dbxref=GenBank:WP_047199433.1;Name=WP_047199433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217288.1;locus_tag=D5F92_RS01015;product=helix-turn-helix domain-containing protein;protein_id=WP_047199433.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 17430 19415 . + . ID=gene-D5F92_RS01020;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=D5F92_RS01020;old_locus_tag=D5F92_01025 NZ_QYTJ01000006.1 Protein Homology CDS 17430 19415 . + 0 ID=cds-WP_000141859.1;Parent=gene-D5F92_RS01020;Dbxref=GenBank:WP_000141859.1;Name=WP_000141859.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771905.1;locus_tag=D5F92_RS01020;product=transketolase;protein_id=WP_000141859.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 19628 19933 . + . ID=gene-D5F92_RS01025;Name=D5F92_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01025;old_locus_tag=D5F92_01030 NZ_QYTJ01000006.1 Protein Homology CDS 19628 19933 . + 0 ID=cds-WP_000711207.1;Parent=gene-D5F92_RS01025;Dbxref=GenBank:WP_000711207.1;Name=WP_000711207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711205.1;locus_tag=D5F92_RS01025;product=bacteriocin immunity protein;protein_id=WP_000711207.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 19953 20687 . + . ID=gene-D5F92_RS01030;Name=D5F92_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01030;old_locus_tag=D5F92_01035 NZ_QYTJ01000006.1 Protein Homology CDS 19953 20687 . + 0 ID=cds-WP_000589158.1;Parent=gene-D5F92_RS01030;Dbxref=GenBank:WP_000589158.1;Name=WP_000589158.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644658.1;locus_tag=D5F92_RS01030;product=ABC transporter ATP-binding protein;protein_id=WP_000589158.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 20691 22295 . + . ID=gene-D5F92_RS01035;Name=D5F92_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01035;old_locus_tag=D5F92_01040 NZ_QYTJ01000006.1 Protein Homology CDS 20691 22295 . + 0 ID=cds-WP_016480286.1;Parent=gene-D5F92_RS01035;Dbxref=GenBank:WP_016480286.1;Name=WP_016480286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644442.1;locus_tag=D5F92_RS01035;product=ABC transporter permease;protein_id=WP_016480286.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 22503 23888 . - . ID=gene-D5F92_RS01040;Name=D5F92_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01040;old_locus_tag=D5F92_01045 NZ_QYTJ01000006.1 Protein Homology CDS 22503 23888 . - 0 ID=cds-WP_016480287.1;Parent=gene-D5F92_RS01040;Dbxref=GenBank:WP_016480287.1;Name=WP_016480287.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643962.1;locus_tag=D5F92_RS01040;product=PTS transporter subunit EIIC;protein_id=WP_016480287.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 24029 24832 . + . ID=gene-D5F92_RS01045;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=D5F92_RS01045;old_locus_tag=D5F92_01050 NZ_QYTJ01000006.1 Protein Homology CDS 24029 24832 . + 0 ID=cds-WP_124749557.1;Parent=gene-D5F92_RS01045;Dbxref=GenBank:WP_124749557.1;Name=WP_124749557.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502487.1;locus_tag=D5F92_RS01045;product=glutamate 5-kinase;protein_id=WP_124749557.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 24842 26101 . + . ID=gene-D5F92_RS01050;Name=D5F92_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01050;old_locus_tag=D5F92_01055 NZ_QYTJ01000006.1 Protein Homology CDS 24842 26101 . + 0 ID=cds-WP_124749555.1;Parent=gene-D5F92_RS01050;Dbxref=GenBank:WP_124749555.1;Name=WP_124749555.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221014.1;locus_tag=D5F92_RS01050;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_124749555.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 26184 27131 . + . ID=gene-D5F92_RS01055;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=D5F92_RS01055;old_locus_tag=D5F92_01060 NZ_QYTJ01000006.1 Protein Homology CDS 26184 27131 . + 0 ID=cds-WP_000180264.1;Parent=gene-D5F92_RS01055;Dbxref=GenBank:WP_000180264.1;Name=WP_000180264.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631664.1;locus_tag=D5F92_RS01055;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000180264.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 27146 27472 . + . ID=gene-D5F92_RS01060;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=D5F92_RS01060;old_locus_tag=D5F92_01065 NZ_QYTJ01000006.1 Protein Homology CDS 27146 27472 . + 0 ID=cds-WP_000180568.1;Parent=gene-D5F92_RS01060;Dbxref=GenBank:WP_000180568.1;Name=WP_000180568.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180570.1;locus_tag=D5F92_RS01060;product=cell division protein FtsL;protein_id=WP_000180568.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 27476 29734 . + . ID=gene-D5F92_RS01065;Name=pbp2x;gbkey=Gene;gene=pbp2x;gene_biotype=protein_coding;gene_synonym=pbpX;locus_tag=D5F92_RS01065;old_locus_tag=D5F92_01070 NZ_QYTJ01000006.1 Protein Homology CDS 27476 29734 . + 0 ID=cds-WP_017647104.1;Parent=gene-D5F92_RS01065;Dbxref=GenBank:WP_017647104.1;Name=WP_017647104.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2x;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647338.1;locus_tag=D5F92_RS01065;product=penicillin-binding protein PBP2X;protein_id=WP_017647104.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 29736 30746 . + . ID=gene-D5F92_RS01070;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=D5F92_RS01070;old_locus_tag=D5F92_01075 NZ_QYTJ01000006.1 Protein Homology CDS 29736 30746 . + 0 ID=cds-WP_000480019.1;Parent=gene-D5F92_RS01070;Dbxref=GenBank:WP_000480019.1;Name=WP_000480019.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480019.1;locus_tag=D5F92_RS01070;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000480019.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 30844 32187 . + . ID=gene-D5F92_RS01075;Name=D5F92_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01075;old_locus_tag=D5F92_01080 NZ_QYTJ01000006.1 Protein Homology CDS 30844 32187 . + 0 ID=cds-WP_000008553.1;Parent=gene-D5F92_RS01075;Dbxref=GenBank:WP_000008553.1;Name=WP_000008553.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535518.1;locus_tag=D5F92_RS01075;product=DEAD/DEAH box helicase;protein_id=WP_000008553.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 32325 33137 . + . ID=gene-D5F92_RS01080;Name=D5F92_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01080;old_locus_tag=D5F92_01085 NZ_QYTJ01000006.1 Protein Homology CDS 32325 33137 . + 0 ID=cds-WP_016502490.1;Parent=gene-D5F92_RS01080;Dbxref=GenBank:WP_016502490.1;Name=WP_016502490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473469.1;locus_tag=D5F92_RS01080;product=transporter substrate-binding domain-containing protein;protein_id=WP_016502490.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 33232 34035 . + . ID=gene-D5F92_RS01085;Name=D5F92_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01085;old_locus_tag=D5F92_01090 NZ_QYTJ01000006.1 Protein Homology CDS 33232 34035 . + 0 ID=cds-WP_016502491.1;Parent=gene-D5F92_RS01085;Dbxref=GenBank:WP_016502491.1;Name=WP_016502491.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071292.1;locus_tag=D5F92_RS01085;product=amino acid ABC transporter permease;protein_id=WP_016502491.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 34035 34778 . + . ID=gene-D5F92_RS01090;Name=D5F92_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01090;old_locus_tag=D5F92_01095 NZ_QYTJ01000006.1 Protein Homology CDS 34035 34778 . + 0 ID=cds-WP_000593862.1;Parent=gene-D5F92_RS01090;Dbxref=GenBank:WP_000593862.1;Name=WP_000593862.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768437.1;locus_tag=D5F92_RS01090;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000593862.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 34900 35124 . + . ID=gene-D5F92_RS01095;Name=D5F92_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01095;old_locus_tag=D5F92_01100 NZ_QYTJ01000006.1 Protein Homology CDS 34900 35124 . + 0 ID=cds-WP_000478227.1;Parent=gene-D5F92_RS01095;Dbxref=GenBank:WP_000478227.1;Name=WP_000478227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646607.1;locus_tag=D5F92_RS01095;product=DUF4059 family protein;protein_id=WP_000478227.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 35193 36107 . + . ID=gene-D5F92_RS01100;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=D5F92_RS01100;old_locus_tag=D5F92_01105 NZ_QYTJ01000006.1 Protein Homology CDS 35193 36107 . + 0 ID=cds-WP_000272353.1;Parent=gene-D5F92_RS01100;Dbxref=GenBank:WP_000272353.1;Name=WP_000272353.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480293.1;locus_tag=D5F92_RS01100;product=thioredoxin-disulfide reductase;protein_id=WP_000272353.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 36265 37725 . + . ID=gene-D5F92_RS01105;Name=D5F92_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01105;old_locus_tag=D5F92_01110 NZ_QYTJ01000006.1 Protein Homology CDS 36265 37725 . + 0 ID=cds-WP_016502492.1;Parent=gene-D5F92_RS01105;Dbxref=GenBank:WP_016502492.1;Name=WP_016502492.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649304.1;locus_tag=D5F92_RS01105;product=nicotinate phosphoribosyltransferase;protein_id=WP_016502492.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 37722 38543 . + . ID=gene-D5F92_RS01110;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=D5F92_RS01110;old_locus_tag=D5F92_01115 NZ_QYTJ01000006.1 Protein Homology CDS 37722 38543 . + 0 ID=cds-WP_000174854.1;Parent=gene-D5F92_RS01110;Dbxref=GenBank:WP_000174854.1;Name=WP_000174854.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949400.1;locus_tag=D5F92_RS01110;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174854.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 38656 39990 . + . ID=gene-D5F92_RS01115;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=D5F92_RS01115;old_locus_tag=D5F92_01120 NZ_QYTJ01000006.1 Protein Homology CDS 38656 39990 . + 0 ID=cds-WP_016502493.1;Parent=gene-D5F92_RS01115;Dbxref=GenBank:WP_016502493.1;Name=WP_016502493.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041114.1;locus_tag=D5F92_RS01115;product=aminopeptidase C;protein_id=WP_016502493.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 40036 42276 . - . ID=gene-D5F92_RS01120;Name=pbp1a;gbkey=Gene;gene=pbp1a;gene_biotype=protein_coding;locus_tag=D5F92_RS01120;old_locus_tag=D5F92_01125 NZ_QYTJ01000006.1 Protein Homology CDS 40036 42276 . - 0 ID=cds-WP_086163218.1;Parent=gene-D5F92_RS01120;Dbxref=GenBank:WP_086163218.1;Name=WP_086163218.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp1a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628363.1;locus_tag=D5F92_RS01120;product=penicillin-binding protein PBP1A;protein_id=WP_086163218.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 42263 42862 . - . ID=gene-D5F92_RS01125;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=D5F92_RS01125;old_locus_tag=D5F92_01130 NZ_QYTJ01000006.1 Protein Homology CDS 42263 42862 . - 0 ID=cds-WP_000248792.1;Parent=gene-D5F92_RS01125;Dbxref=GenBank:WP_000248792.1;Name=WP_000248792.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248791.1;locus_tag=D5F92_RS01125;product=Holliday junction resolvase RecU;protein_id=WP_000248792.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 42937 43455 . + . ID=gene-D5F92_RS01130;Name=D5F92_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01130;old_locus_tag=D5F92_01135 NZ_QYTJ01000006.1 Protein Homology CDS 42937 43455 . + 0 ID=cds-WP_000843096.1;Parent=gene-D5F92_RS01130;Dbxref=GenBank:WP_000843096.1;Name=WP_000843096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843102.1;locus_tag=D5F92_RS01130;product=DUF1273 domain-containing protein;protein_id=WP_000843096.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 43576 43908 . + . ID=gene-D5F92_RS01140;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=D5F92_RS01140;old_locus_tag=D5F92_01145 NZ_QYTJ01000006.1 Protein Homology CDS 43576 43908 . + 0 ID=cds-WP_000146544.1;Parent=gene-D5F92_RS01140;Dbxref=GenBank:WP_000146544.1;Name=WP_000146544.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146543.1;locus_tag=D5F92_RS01140;product=cell division regulator GpsB;protein_id=WP_000146544.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 43927 44295 . + . ID=gene-D5F92_RS01145;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=D5F92_RS01145;old_locus_tag=D5F92_01150 NZ_QYTJ01000006.1 cmsearch RNase_P_RNA 43927 44295 . + . ID=rna-D5F92_RS01145;Parent=gene-D5F92_RS01145;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS01145;product=RNase P RNA component class B NZ_QYTJ01000006.1 cmsearch exon 43927 44295 . + . ID=exon-D5F92_RS01145-1;Parent=rna-D5F92_RS01145;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS01145;product=RNase P RNA component class B NZ_QYTJ01000006.1 RefSeq gene 44378 45532 . + . ID=gene-D5F92_RS01150;Name=D5F92_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01150;old_locus_tag=D5F92_01155 NZ_QYTJ01000006.1 Protein Homology CDS 44378 45532 . + 0 ID=cds-WP_000664848.1;Parent=gene-D5F92_RS01150;Dbxref=GenBank:WP_000664848.1;Name=WP_000664848.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664853.1;locus_tag=D5F92_RS01150;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_000664848.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 45545 47032 . + . ID=gene-D5F92_RS01155;Name=D5F92_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01155;old_locus_tag=D5F92_01160 NZ_QYTJ01000006.1 Protein Homology CDS 45545 47032 . + 0 ID=cds-WP_016502498.1;Parent=gene-D5F92_RS01155;Dbxref=GenBank:WP_016502498.1;Name=WP_016502498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287870.1;locus_tag=D5F92_RS01155;product=cell division site-positioning protein MapZ family protein;protein_id=WP_016502498.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 47257 47739 . - . ID=gene-D5F92_RS01160;Name=D5F92_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01160;old_locus_tag=D5F92_01165 NZ_QYTJ01000006.1 Protein Homology CDS 47257 47739 . - 0 ID=cds-WP_000159885.1;Parent=gene-D5F92_RS01160;Dbxref=GenBank:WP_000159885.1;Name=WP_000159885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885585.1;locus_tag=D5F92_RS01160;product=S-ribosylhomocysteine lyase;protein_id=WP_000159885.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 47928 49535 . + . ID=gene-D5F92_RS01165;Name=D5F92_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01165;old_locus_tag=D5F92_01170 NZ_QYTJ01000006.1 Protein Homology CDS 47928 49535 . + 0 ID=cds-WP_000481839.1;Parent=gene-D5F92_RS01165;Dbxref=GenBank:WP_000481839.1;Name=WP_000481839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771814.1;locus_tag=D5F92_RS01165;product=ribonuclease Y;protein_id=WP_000481839.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 49664 50560 . + . ID=gene-D5F92_RS01175;Name=D5F92_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01175;old_locus_tag=D5F92_01180 NZ_QYTJ01000006.1 Protein Homology CDS 49664 50560 . + 0 ID=cds-WP_086163219.1;Parent=gene-D5F92_RS01175;Dbxref=GenBank:WP_086163219.1;Name=WP_086163219.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029972.1;locus_tag=D5F92_RS01175;product=ABC transporter ATP-binding protein;protein_id=WP_086163219.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 50547 51287 . + . ID=gene-D5F92_RS01180;Name=D5F92_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01180;old_locus_tag=D5F92_01185 NZ_QYTJ01000006.1 Protein Homology CDS 50547 51287 . + 0 ID=cds-WP_001217939.1;Parent=gene-D5F92_RS01180;Dbxref=GenBank:WP_001217939.1;Name=WP_001217939.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285114.1;locus_tag=D5F92_RS01180;product=ABC transporter permease;protein_id=WP_001217939.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 51284 52369 . + . ID=gene-D5F92_RS01185;Name=D5F92_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01185;old_locus_tag=D5F92_01190 NZ_QYTJ01000006.1 Protein Homology CDS 51284 52369 . + 0 ID=cds-WP_016502503.1;Parent=gene-D5F92_RS01185;Dbxref=GenBank:WP_016502503.1;Name=WP_016502503.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791351.1;locus_tag=D5F92_RS01185;product=sensor histidine kinase;protein_id=WP_016502503.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 52371 52961 . + . ID=gene-D5F92_RS01190;Name=D5F92_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01190;old_locus_tag=D5F92_01195 NZ_QYTJ01000006.1 Protein Homology CDS 52371 52961 . + 0 ID=cds-WP_016502504.1;Parent=gene-D5F92_RS01190;Dbxref=GenBank:WP_016502504.1;Name=WP_016502504.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502504.1;locus_tag=D5F92_RS01190;product=response regulator transcription factor;protein_id=WP_016502504.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 53010 53714 . + . ID=gene-D5F92_RS01195;Name=D5F92_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01195;old_locus_tag=D5F92_01200 NZ_QYTJ01000006.1 Protein Homology CDS 53010 53714 . + 0 ID=cds-WP_016502505.1;Parent=gene-D5F92_RS01195;Dbxref=GenBank:WP_016502505.1;Name=WP_016502505.1;Ontology_term=GO:0071805,GO:0005267,GO:0015252,GO:0022841;gbkey=CDS;go_function=potassium channel activity|0005267||IEA,proton channel activity|0015252||IEA,potassium ion leak channel activity|0022841||IEA;go_process=potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168921.1;locus_tag=D5F92_RS01195;product=TMEM175 family protein;protein_id=WP_016502505.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 53881 54510 . + . ID=gene-D5F92_RS01200;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=D5F92_RS01200;old_locus_tag=D5F92_01205 NZ_QYTJ01000006.1 Protein Homology CDS 53881 54510 . + 0 ID=cds-WP_000003861.1;Parent=gene-D5F92_RS01200;Dbxref=GenBank:WP_000003861.1;Name=WP_000003861.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003862.1;locus_tag=D5F92_RS01200;product=guanylate kinase;protein_id=WP_000003861.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 54533 54847 . + . ID=gene-D5F92_RS01205;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=D5F92_RS01205;old_locus_tag=D5F92_01210 NZ_QYTJ01000006.1 Protein Homology CDS 54533 54847 . + 0 ID=cds-WP_000979239.1;Parent=gene-D5F92_RS01205;Dbxref=GenBank:WP_000979239.1;Name=WP_000979239.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979238.1;locus_tag=D5F92_RS01205;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000979239.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 54921 57311 . + . ID=gene-D5F92_RS01210;Name=D5F92_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01210;old_locus_tag=D5F92_01215 NZ_QYTJ01000006.1 Protein Homology CDS 54921 57311 . + 0 ID=cds-WP_124749551.1;Parent=gene-D5F92_RS01210;Dbxref=GenBank:WP_124749551.1;Name=WP_124749551.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101529.1;locus_tag=D5F92_RS01210;product=primosomal protein N';protein_id=WP_124749551.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 57358 58293 . + . ID=gene-D5F92_RS01215;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=D5F92_RS01215;old_locus_tag=D5F92_01220 NZ_QYTJ01000006.1 Protein Homology CDS 57358 58293 . + 0 ID=cds-WP_016502507.1;Parent=gene-D5F92_RS01215;Dbxref=GenBank:WP_016502507.1;Name=WP_016502507.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163891.1;locus_tag=D5F92_RS01215;product=methionyl-tRNA formyltransferase;protein_id=WP_016502507.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 58283 59605 . + . ID=gene-D5F92_RS01220;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=D5F92_RS01220;old_locus_tag=D5F92_01225 NZ_QYTJ01000006.1 Protein Homology CDS 58283 59605 . + 0 ID=cds-WP_016502508.1;Parent=gene-D5F92_RS01220;Dbxref=GenBank:WP_016502508.1;Name=WP_016502508.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262608.1;locus_tag=D5F92_RS01220;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_016502508.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 59643 60380 . + . ID=gene-D5F92_RS01225;Name=D5F92_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01225;old_locus_tag=D5F92_01230 NZ_QYTJ01000006.1 Protein Homology CDS 59643 60380 . + 0 ID=cds-WP_000406234.1;Parent=gene-D5F92_RS01225;Dbxref=GenBank:WP_000406234.1;Name=WP_000406234.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406232.1;locus_tag=D5F92_RS01225;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_000406234.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 60380 62335 . + . ID=gene-D5F92_RS01230;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=D5F92_RS01230;old_locus_tag=D5F92_01235 NZ_QYTJ01000006.1 Protein Homology CDS 60380 62335 . + 0 ID=cds-WP_016502509.1;Parent=gene-D5F92_RS01230;Dbxref=GenBank:WP_016502509.1;Name=WP_016502509.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614563.1;locus_tag=D5F92_RS01230;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_016502509.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 62494 63189 . + . ID=gene-D5F92_RS01235;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=D5F92_RS01235;old_locus_tag=D5F92_01240 NZ_QYTJ01000006.1 Protein Homology CDS 62494 63189 . + 0 ID=cds-WP_000714456.1;Parent=gene-D5F92_RS01235;Dbxref=GenBank:WP_000714456.1;Name=WP_000714456.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714455.1;locus_tag=D5F92_RS01235;product=cell wall-active antibiotics response protein LiaF;protein_id=WP_000714456.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 63186 64205 . + . ID=gene-D5F92_RS01240;Name=D5F92_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01240;old_locus_tag=D5F92_01245 NZ_QYTJ01000006.1 Protein Homology CDS 63186 64205 . + 0 ID=cds-WP_016502510.1;Parent=gene-D5F92_RS01240;Dbxref=GenBank:WP_016502510.1;Name=WP_016502510.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645977.1;locus_tag=D5F92_RS01240;product=sensor histidine kinase;protein_id=WP_016502510.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 64198 64839 . + . ID=gene-D5F92_RS01245;Name=D5F92_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01245;old_locus_tag=D5F92_01250 NZ_QYTJ01000006.1 Protein Homology CDS 64198 64839 . + 0 ID=cds-WP_000357891.1;Parent=gene-D5F92_RS01245;Dbxref=GenBank:WP_000357891.1;Name=WP_000357891.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480307.1;locus_tag=D5F92_RS01245;product=response regulator transcription factor;protein_id=WP_000357891.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 64881 66281 . + . ID=gene-D5F92_RS01250;Name=D5F92_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01250;old_locus_tag=D5F92_01255 NZ_QYTJ01000006.1 Protein Homology CDS 64881 66281 . + 0 ID=cds-WP_000339135.1;Parent=gene-D5F92_RS01250;Dbxref=GenBank:WP_000339135.1;Name=WP_000339135.1;Ontology_term=GO:0000413,GO:0003755,GO:0016791;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,phosphatase activity|0016791||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058358.1;locus_tag=D5F92_RS01250;product=bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase;protein_id=WP_000339135.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 66283 66639 . + . ID=gene-D5F92_RS01255;Name=D5F92_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01255;old_locus_tag=D5F92_01260 NZ_QYTJ01000006.1 Protein Homology CDS 66283 66639 . + 0 ID=cds-WP_000689608.1;Parent=gene-D5F92_RS01255;Dbxref=GenBank:WP_000689608.1;Name=WP_000689608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644186.1;locus_tag=D5F92_RS01255;product=S1 RNA-binding domain-containing protein;protein_id=WP_000689608.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 66685 67461 . - . ID=gene-D5F92_RS01260;Name=D5F92_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01260;old_locus_tag=D5F92_01265 NZ_QYTJ01000006.1 Protein Homology CDS 66685 67461 . - 0 ID=cds-WP_016502513.1;Parent=gene-D5F92_RS01260;Dbxref=GenBank:WP_016502513.1;Name=WP_016502513.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647428.1;locus_tag=D5F92_RS01260;product=glycyl-radical enzyme activating protein;protein_id=WP_016502513.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 67582 68337 . + . ID=gene-D5F92_RS01265;Name=D5F92_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01265;old_locus_tag=D5F92_01270 NZ_QYTJ01000006.1 Protein Homology CDS 67582 68337 . + 0 ID=cds-WP_001080743.1;Parent=gene-D5F92_RS01265;Dbxref=GenBank:WP_001080743.1;Name=WP_001080743.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080747.1;locus_tag=D5F92_RS01265;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001080743.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 68456 69439 . + . ID=gene-D5F92_RS01270;Name=D5F92_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01270;old_locus_tag=D5F92_01275 NZ_QYTJ01000006.1 Protein Homology CDS 68456 69439 . + 0 ID=cds-WP_124749563.1;Parent=gene-D5F92_RS01270;Dbxref=GenBank:WP_124749563.1;Name=WP_124749563.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764457.1;locus_tag=D5F92_RS01270;product=sugar-binding transcriptional regulator;protein_id=WP_124749563.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 69643 69966 . + . ID=gene-D5F92_RS01275;Name=D5F92_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01275;old_locus_tag=D5F92_01280 NZ_QYTJ01000006.1 Protein Homology CDS 69643 69966 . + 0 ID=cds-WP_000402898.1;Parent=gene-D5F92_RS01275;Dbxref=GenBank:WP_000402898.1;Name=WP_000402898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402898.1;locus_tag=D5F92_RS01275;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_000402898.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 69983 70303 . + . ID=gene-D5F92_RS01280;Name=D5F92_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01280;old_locus_tag=D5F92_01285 NZ_QYTJ01000006.1 Protein Homology CDS 69983 70303 . + 0 ID=cds-WP_000590363.1;Parent=gene-D5F92_RS01280;Dbxref=GenBank:WP_000590363.1;Name=WP_000590363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644439.1;locus_tag=D5F92_RS01280;product=PTS sugar transporter subunit IIB;protein_id=WP_000590363.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 70305 71606 . + . ID=gene-D5F92_RS01285;Name=D5F92_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01285;old_locus_tag=D5F92_01290 NZ_QYTJ01000006.1 Protein Homology CDS 70305 71606 . + 0 ID=cds-WP_016502514.1;Parent=gene-D5F92_RS01285;Dbxref=GenBank:WP_016502514.1;Name=WP_016502514.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032678.1;locus_tag=D5F92_RS01285;product=PTS sugar transporter subunit IIC;protein_id=WP_016502514.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 71787 74243 . + . ID=gene-D5F92_RS01290;Name=D5F92_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01290;old_locus_tag=D5F92_01295 NZ_QYTJ01000006.1 Protein Homology CDS 71787 74243 . + 0 ID=cds-WP_124749549.1;Parent=gene-D5F92_RS01290;Dbxref=GenBank:WP_124749549.1;Name=WP_124749549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166131.1;locus_tag=D5F92_RS01290;product=glycyl radical protein;protein_id=WP_124749549.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 74253 74921 . + . ID=gene-D5F92_RS01295;Name=D5F92_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01295;old_locus_tag=D5F92_01300 NZ_QYTJ01000006.1 Protein Homology CDS 74253 74921 . + 0 ID=cds-WP_000394894.1;Parent=gene-D5F92_RS01295;Dbxref=GenBank:WP_000394894.1;Name=WP_000394894.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394891.1;locus_tag=D5F92_RS01295;product=fructose-6-phosphate aldolase;protein_id=WP_000394894.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 74989 76077 . + . ID=gene-D5F92_RS01300;Name=D5F92_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01300;old_locus_tag=D5F92_01305 NZ_QYTJ01000006.1 Protein Homology CDS 74989 76077 . + 0 ID=cds-WP_000862118.1;Parent=gene-D5F92_RS01300;Dbxref=GenBank:WP_000862118.1;Name=WP_000862118.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862121.1;locus_tag=D5F92_RS01300;product=glycerol dehydrogenase;protein_id=WP_000862118.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 76229 77155 . - . ID=gene-D5F92_RS01305;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=D5F92_RS01305;old_locus_tag=D5F92_01310 NZ_QYTJ01000006.1 Protein Homology CDS 76229 77155 . - 0 ID=cds-WP_124749547.1;Parent=gene-D5F92_RS01305;Dbxref=GenBank:WP_124749547.1;Name=WP_124749547.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646141.1;locus_tag=D5F92_RS01305;product=cysteine synthase A;protein_id=WP_124749547.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 77246 77890 . - . ID=gene-D5F92_RS01310;Name=D5F92_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01310;old_locus_tag=D5F92_01315 NZ_QYTJ01000006.1 Protein Homology CDS 77246 77890 . - 0 ID=cds-WP_001108145.1;Parent=gene-D5F92_RS01310;Dbxref=GenBank:WP_001108145.1;Name=WP_001108145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108146.1;locus_tag=D5F92_RS01310;product=YigZ family protein;protein_id=WP_001108145.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 77946 79235 . + . ID=gene-D5F92_RS01315;Name=D5F92_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01315;old_locus_tag=D5F92_01320 NZ_QYTJ01000006.1 Protein Homology CDS 77946 79235 . + 0 ID=cds-WP_016502518.1;Parent=gene-D5F92_RS01315;Dbxref=GenBank:WP_016502518.1;Name=WP_016502518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771642.1;locus_tag=D5F92_RS01315;product=DEAD/DEAH box helicase;protein_id=WP_016502518.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 79235 79900 . + . ID=gene-D5F92_RS01320;Name=D5F92_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01320;old_locus_tag=D5F92_01325 NZ_QYTJ01000006.1 Protein Homology CDS 79235 79900 . + 0 ID=cds-WP_000128287.1;Parent=gene-D5F92_RS01320;Dbxref=GenBank:WP_000128287.1;Name=WP_000128287.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128288.1;locus_tag=D5F92_RS01320;product=ComF family protein;protein_id=WP_000128287.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 79977 80531 . + . ID=gene-D5F92_RS01325;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=D5F92_RS01325;old_locus_tag=D5F92_01330 NZ_QYTJ01000006.1 Protein Homology CDS 79977 80531 . + 0 ID=cds-WP_000599096.1;Parent=gene-D5F92_RS01325;Dbxref=GenBank:WP_000599096.1;Name=WP_000599096.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599095.1;locus_tag=D5F92_RS01325;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_000599096.1;transl_table=11 NZ_QYTJ01000006.1 RefSeq gene 80854 81283 . + . ID=gene-D5F92_RS01330;Name=D5F92_RS01330;end_range=81283,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS01330;old_locus_tag=D5F92_01335;partial=true NZ_QYTJ01000006.1 cmsearch rRNA 80854 81283 . + . ID=rna-D5F92_RS01330;Parent=gene-D5F92_RS01330;Dbxref=RFAM:RF00177;end_range=81283,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS01330;partial=true;product=16S ribosomal RNA NZ_QYTJ01000006.1 cmsearch exon 80854 81283 . + . ID=exon-D5F92_RS01330-1;Parent=rna-D5F92_RS01330;Dbxref=RFAM:RF00177;end_range=81283,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS01330;partial=true;product=16S ribosomal RNA ##sequence-region NZ_QYTJ01000060.1 1 5142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000060.1 RefSeq region 1 5142 . + . ID=NZ_QYTJ01000060.1:1..5142;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000060.1 RefSeq gene 447 2042 . - . ID=gene-D5F92_RS10625;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=D5F92_RS10625;old_locus_tag=D5F92_10640 NZ_QYTJ01000060.1 Protein Homology CDS 447 2042 . - 0 ID=cds-WP_016480784.1;Parent=gene-D5F92_RS10625;Dbxref=GenBank:WP_016480784.1;Name=WP_016480784.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638280.1;locus_tag=D5F92_RS10625;product=cardiolipin synthase;protein_id=WP_016480784.1;transl_table=11 NZ_QYTJ01000060.1 RefSeq gene 2161 3831 . - . ID=gene-D5F92_RS10630;Name=D5F92_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10630;old_locus_tag=D5F92_10645 NZ_QYTJ01000060.1 Protein Homology CDS 2161 3831 . - 0 ID=cds-WP_016502894.1;Parent=gene-D5F92_RS10630;Dbxref=GenBank:WP_016502894.1;Name=WP_016502894.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646002.1;locus_tag=D5F92_RS10630;product=formate--tetrahydrofolate ligase;protein_id=WP_016502894.1;transl_table=11 NZ_QYTJ01000060.1 RefSeq gene 3920 4939 . - . ID=gene-D5F92_RS10635;Name=D5F92_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10635;old_locus_tag=D5F92_10650 NZ_QYTJ01000060.1 Protein Homology CDS 3920 4939 . - 0 ID=cds-WP_000280831.1;Parent=gene-D5F92_RS10635;Dbxref=GenBank:WP_000280831.1;Name=WP_000280831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280824.1;locus_tag=D5F92_RS10635;product=lipoate--protein ligase;protein_id=WP_000280831.1;transl_table=11 NZ_QYTJ01000060.1 RefSeq pseudogene 4966 5142 . - . ID=gene-D5F92_RS10640;Name=D5F92_RS10640;end_range=5142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10640;old_locus_tag=D5F92_10655;partial=true;pseudo=true NZ_QYTJ01000060.1 Protein Homology CDS 4966 5142 . - 0 ID=cds-D5F92_RS10640;Parent=gene-D5F92_RS10640;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5142,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219408.1;locus_tag=D5F92_RS10640;partial=true;product=deacetylase SIR2;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000061.1 1 18361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000061.1 RefSeq region 1 18361 . + . ID=NZ_QYTJ01000061.1:1..18361;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000061.1 RefSeq gene 1 798 . - . ID=gene-D5F92_RS10645;Name=D5F92_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10645;old_locus_tag=D5F92_10660;partial=true;start_range=.,1 NZ_QYTJ01000061.1 Protein Homology CDS 1 798 . - 0 ID=cds-WP_124785531.1;Parent=gene-D5F92_RS10645;Dbxref=GenBank:WP_124785531.1;Name=WP_124785531.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019770913.1;locus_tag=D5F92_RS10645;partial=true;product=phosphopentomutase;protein_id=WP_124785531.1;start_range=.,1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 855 1526 . - . ID=gene-D5F92_RS10650;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=D5F92_RS10650;old_locus_tag=D5F92_10665 NZ_QYTJ01000061.1 Protein Homology CDS 855 1526 . - 0 ID=cds-WP_000343877.1;Parent=gene-D5F92_RS10650;Dbxref=GenBank:WP_000343877.1;Name=WP_000343877.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343878.1;locus_tag=D5F92_RS10650;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000343877.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 1764 2474 . - . ID=gene-D5F92_RS10655;Name=D5F92_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10655;old_locus_tag=D5F92_10670 NZ_QYTJ01000061.1 Protein Homology CDS 1764 2474 . - 0 ID=cds-WP_001259484.1;Parent=gene-D5F92_RS10655;Dbxref=GenBank:WP_001259484.1;Name=WP_001259484.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270,GO:0031012;gbkey=CDS;go_component=extracellular matrix|0031012||IEA;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259490.1;locus_tag=D5F92_RS10655;product=matrixin family metalloprotease;protein_id=WP_001259484.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 2564 3352 . - . ID=gene-D5F92_RS10660;Name=D5F92_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10660;old_locus_tag=D5F92_10675 NZ_QYTJ01000061.1 Protein Homology CDS 2564 3352 . - 0 ID=cds-WP_000863790.1;Parent=gene-D5F92_RS10660;Dbxref=GenBank:WP_000863790.1;Name=WP_000863790.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863793.1;locus_tag=D5F92_RS10660;product=alpha/beta hydrolase;protein_id=WP_000863790.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 3409 5070 . - . ID=gene-D5F92_RS10665;Name=D5F92_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10665;old_locus_tag=D5F92_10680 NZ_QYTJ01000061.1 Protein Homology CDS 3409 5070 . - 0 ID=cds-WP_001280077.1;Parent=gene-D5F92_RS10665;Dbxref=GenBank:WP_001280077.1;Name=WP_001280077.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646201.1;locus_tag=D5F92_RS10665;product=ribonuclease J;protein_id=WP_001280077.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 5367 6128 . - . ID=gene-D5F92_RS10670;Name=D5F92_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10670;old_locus_tag=D5F92_10685 NZ_QYTJ01000061.1 Protein Homology CDS 5367 6128 . - 0 ID=cds-WP_000245083.1;Parent=gene-D5F92_RS10670;Dbxref=GenBank:WP_000245083.1;Name=WP_000245083.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480857.1;locus_tag=D5F92_RS10670;product=ABC transporter ATP-binding protein;protein_id=WP_000245083.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 6128 6991 . - . ID=gene-D5F92_RS10675;Name=D5F92_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10675;old_locus_tag=D5F92_10690 NZ_QYTJ01000061.1 Protein Homology CDS 6128 6991 . - 0 ID=cds-WP_000587303.1;Parent=gene-D5F92_RS10675;Dbxref=GenBank:WP_000587303.1;Name=WP_000587303.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587306.1;locus_tag=D5F92_RS10675;product=ABC transporter permease;protein_id=WP_000587303.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 7004 8008 . - . ID=gene-D5F92_RS10680;Name=trpX;gbkey=Gene;gene=trpX;gene_biotype=protein_coding;locus_tag=D5F92_RS10680;old_locus_tag=D5F92_10695 NZ_QYTJ01000061.1 Protein Homology CDS 7004 8008 . - 0 ID=cds-WP_000790857.1;Parent=gene-D5F92_RS10680;Dbxref=GenBank:WP_000790857.1;Name=WP_000790857.1;gbkey=CDS;gene=trpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790854.1;locus_tag=D5F92_RS10680;product=tryptophan ABC transporter substrate-binding protein;protein_id=WP_000790857.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 8367 10022 . + . ID=gene-D5F92_RS10685;Name=D5F92_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10685;old_locus_tag=D5F92_10700 NZ_QYTJ01000061.1 Protein Homology CDS 8367 10022 . + 0 ID=cds-WP_016502950.1;Parent=gene-D5F92_RS10685;Dbxref=GenBank:WP_016502950.1;Name=WP_016502950.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006719.1;locus_tag=D5F92_RS10685;product=Rqc2 family fibronectin-binding protein;protein_id=WP_016502950.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 10076 10795 . - . ID=gene-D5F92_RS10690;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=D5F92_RS10690;old_locus_tag=D5F92_10705 NZ_QYTJ01000061.1 Protein Homology CDS 10076 10795 . - 0 ID=cds-WP_000005475.1;Parent=gene-D5F92_RS10690;Dbxref=GenBank:WP_000005475.1;Name=WP_000005475.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647746.1;locus_tag=D5F92_RS10690;product=acetolactate decarboxylase;protein_id=WP_000005475.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 10809 12491 . - . ID=gene-D5F92_RS10695;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=D5F92_RS10695;old_locus_tag=D5F92_10710 NZ_QYTJ01000061.1 Protein Homology CDS 10809 12491 . - 0 ID=cds-WP_000140344.1;Parent=gene-D5F92_RS10695;Dbxref=GenBank:WP_000140344.1;Name=WP_000140344.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632065.1;locus_tag=D5F92_RS10695;product=acetolactate synthase AlsS;protein_id=WP_000140344.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 12601 13827 . - . ID=gene-D5F92_RS10700;Name=D5F92_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10700;old_locus_tag=D5F92_10715 NZ_QYTJ01000061.1 Protein Homology CDS 12601 13827 . - 0 ID=cds-WP_016502951.1;Parent=gene-D5F92_RS10700;Dbxref=GenBank:WP_016502951.1;Name=WP_016502951.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058602.1;locus_tag=D5F92_RS10700;product=tetratricopeptide repeat protein;protein_id=WP_016502951.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 13817 15007 . - . ID=gene-D5F92_RS10705;Name=D5F92_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10705;old_locus_tag=D5F92_10720 NZ_QYTJ01000061.1 Protein Homology CDS 13817 15007 . - 0 ID=cds-WP_001081535.1;Parent=gene-D5F92_RS10705;Dbxref=GenBank:WP_001081535.1;Name=WP_001081535.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081542.1;locus_tag=D5F92_RS10705;product=AI-2E family transporter;protein_id=WP_001081535.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 15099 15560 . - . ID=gene-D5F92_RS10710;Name=D5F92_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10710;old_locus_tag=D5F92_10725 NZ_QYTJ01000061.1 Protein Homology CDS 15099 15560 . - 0 ID=cds-WP_124749406.1;Parent=gene-D5F92_RS10710;Dbxref=GenBank:WP_124749406.1;Name=WP_124749406.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502952.1;locus_tag=D5F92_RS10710;product=NUDIX hydrolase;protein_id=WP_124749406.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 15550 16032 . - . ID=gene-D5F92_RS10715;Name=D5F92_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10715;old_locus_tag=D5F92_10730 NZ_QYTJ01000061.1 Protein Homology CDS 15550 16032 . - 0 ID=cds-WP_000163512.1;Parent=gene-D5F92_RS10715;Dbxref=GenBank:WP_000163512.1;Name=WP_000163512.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285310.1;locus_tag=D5F92_RS10715;product=NUDIX hydrolase;protein_id=WP_000163512.1;transl_table=11 NZ_QYTJ01000061.1 RefSeq pseudogene 16251 17858 . + . ID=gene-D5F92_RS10720;Name=hylB;end_range=17858,.;gbkey=Gene;gene=hylB;gene_biotype=pseudogene;locus_tag=D5F92_RS10720;old_locus_tag=D5F92_10735;partial=true;pseudo=true NZ_QYTJ01000061.1 Protein Homology CDS 16251 17858 . + 0 ID=cds-D5F92_RS10720;Parent=gene-D5F92_RS10720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17858,.;gbkey=CDS;gene=hylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403395.1;locus_tag=D5F92_RS10720;partial=true;product=hyaluronate lyase;pseudo=true;transl_table=11 NZ_QYTJ01000061.1 RefSeq gene 17902 18361 . - . ID=gene-D5F92_RS10725;Name=D5F92_RS10725;end_range=18361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10725;old_locus_tag=D5F92_10740;partial=true NZ_QYTJ01000061.1 Protein Homology CDS 17902 18361 . - 1 ID=cds-WP_124785533.1;Parent=gene-D5F92_RS10725;Dbxref=GenBank:WP_124785533.1;Name=WP_124785533.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=18361,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS10725;partial=true;product=integrase core domain-containing protein;protein_id=WP_124785533.1;transl_table=11 ##sequence-region NZ_QYTJ01000062.1 1 9725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000062.1 RefSeq region 1 9725 . + . ID=NZ_QYTJ01000062.1:1..9725;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000062.1 RefSeq gene 116 670 . - . ID=gene-D5F92_RS10730;Name=D5F92_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10730;old_locus_tag=D5F92_10745 NZ_QYTJ01000062.1 Protein Homology CDS 116 670 . - 0 ID=cds-WP_016502872.1;Parent=gene-D5F92_RS10730;Dbxref=GenBank:WP_016502872.1;Name=WP_016502872.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502872.1;locus_tag=D5F92_RS10730;product=sugar O-acetyltransferase;protein_id=WP_016502872.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 691 1452 . - . ID=gene-D5F92_RS10735;Name=D5F92_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10735;old_locus_tag=D5F92_10750 NZ_QYTJ01000062.1 Protein Homology CDS 691 1452 . - 0 ID=cds-WP_000201090.1;Parent=gene-D5F92_RS10735;Dbxref=GenBank:WP_000201090.1;Name=WP_000201090.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480754.1;locus_tag=D5F92_RS10735;product=ribonuclease HII;protein_id=WP_000201090.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 1439 2290 . - . ID=gene-D5F92_RS10740;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=D5F92_RS10740;old_locus_tag=D5F92_10755 NZ_QYTJ01000062.1 Protein Homology CDS 1439 2290 . - 0 ID=cds-WP_000201279.1;Parent=gene-D5F92_RS10740;Dbxref=GenBank:WP_000201279.1;Name=WP_000201279.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201281.1;locus_tag=D5F92_RS10740;product=ribosome biogenesis GTPase YlqF;protein_id=WP_000201279.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 2566 3138 . - . ID=gene-D5F92_RS10745;Name=D5F92_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10745;old_locus_tag=D5F92_10760 NZ_QYTJ01000062.1 Protein Homology CDS 2566 3138 . - 0 ID=cds-WP_001231795.1;Parent=gene-D5F92_RS10745;Dbxref=GenBank:WP_001231795.1;Name=WP_001231795.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231800.1;locus_tag=D5F92_RS10745;product=L%2CD-transpeptidase;protein_id=WP_001231795.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 3339 4823 . - . ID=gene-D5F92_RS10750;Name=D5F92_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10750;old_locus_tag=D5F92_10765 NZ_QYTJ01000062.1 Protein Homology CDS 3339 4823 . - 0 ID=cds-WP_016502877.1;Parent=gene-D5F92_RS10750;Dbxref=GenBank:WP_016502877.1;Name=WP_016502877.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768250.1;locus_tag=D5F92_RS10750;product=carbon starvation CstA family protein;protein_id=WP_016502877.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 4979 5713 . - . ID=gene-D5F92_RS10755;Name=ltdR;gbkey=Gene;gene=ltdR;gene_biotype=protein_coding;locus_tag=D5F92_RS10755;old_locus_tag=D5F92_10770 NZ_QYTJ01000062.1 Protein Homology CDS 4979 5713 . - 0 ID=cds-WP_000866964.1;Parent=gene-D5F92_RS10755;Dbxref=GenBank:WP_000866964.1;Name=WP_000866964.1;gbkey=CDS;gene=ltdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866963.1;locus_tag=D5F92_RS10755;product=response regulator transcription factor LtdR;protein_id=WP_000866964.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 5725 7464 . - . ID=gene-D5F92_RS10760;Name=D5F92_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10760;old_locus_tag=D5F92_10775 NZ_QYTJ01000062.1 Protein Homology CDS 5725 7464 . - 0 ID=cds-WP_016502878.1;Parent=gene-D5F92_RS10760;Dbxref=GenBank:WP_016502878.1;Name=WP_016502878.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171904.1;locus_tag=D5F92_RS10760;product=sensor histidine kinase;protein_id=WP_016502878.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 8002 8124 . - . ID=gene-D5F92_RS10765;Name=D5F92_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10765;old_locus_tag=D5F92_10780 NZ_QYTJ01000062.1 Protein Homology CDS 8002 8124 . - 0 ID=cds-WP_000472358.1;Parent=gene-D5F92_RS10765;Dbxref=GenBank:WP_000472358.1;Name=WP_000472358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472358.1;locus_tag=D5F92_RS10765;product=lipoprotein;protein_id=WP_000472358.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq pseudogene 8592 8771 . - . ID=gene-D5F92_RS11490;Name=D5F92_RS11490;end_range=8771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11490;old_locus_tag=D5F92_10785;partial=true;pseudo=true NZ_QYTJ01000062.1 Protein Homology CDS 8592 8771 . - 0 ID=cds-D5F92_RS11490;Parent=gene-D5F92_RS11490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926392.1;locus_tag=D5F92_RS11490;partial=true;product=DUF4176 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 9011 9388 . - . ID=gene-D5F92_RS10775;Name=D5F92_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10775;old_locus_tag=D5F92_10790 NZ_QYTJ01000062.1 Protein Homology CDS 9011 9388 . - 0 ID=cds-WP_000479582.1;Parent=gene-D5F92_RS10775;Dbxref=GenBank:WP_000479582.1;Name=WP_000479582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000479581.1;locus_tag=D5F92_RS10775;product=hypothetical protein;protein_id=WP_000479582.1;transl_table=11 NZ_QYTJ01000062.1 RefSeq gene 9452 9725 . - . ID=gene-D5F92_RS10780;Name=D5F92_RS10780;end_range=9725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10780;old_locus_tag=D5F92_10795;partial=true NZ_QYTJ01000062.1 Protein Homology CDS 9452 9725 . - 1 ID=cds-WP_142996898.1;Parent=gene-D5F92_RS10780;Dbxref=GenBank:WP_142996898.1;Name=WP_142996898.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=9725,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770454.1;locus_tag=D5F92_RS10780;partial=true;product=transposase;protein_id=WP_142996898.1;transl_table=11 ##sequence-region NZ_QYTJ01000063.1 1 6164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000063.1 RefSeq region 1 6164 . + . ID=NZ_QYTJ01000063.1:1..6164;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000063.1 RefSeq pseudogene 1 100 . + . ID=gene-D5F92_RS10785;Name=D5F92_RS10785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10785;old_locus_tag=D5F92_10800;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000063.1 Protein Homology CDS 1 100 . + 1 ID=cds-D5F92_RS10785;Parent=gene-D5F92_RS10785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767573.1;locus_tag=D5F92_RS10785;partial=true;product=polyphosphate polymerase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000063.1 RefSeq gene 151 828 . + . ID=gene-D5F92_RS10790;Name=D5F92_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10790;old_locus_tag=D5F92_10805 NZ_QYTJ01000063.1 Protein Homology CDS 151 828 . + 0 ID=cds-WP_000654036.1;Parent=gene-D5F92_RS10790;Dbxref=GenBank:WP_000654036.1;Name=WP_000654036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650973.1;locus_tag=D5F92_RS10790;product=DUF4956 domain-containing protein;protein_id=WP_000654036.1;transl_table=11 NZ_QYTJ01000063.1 RefSeq gene 821 2266 . + . ID=gene-D5F92_RS10795;Name=D5F92_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10795;old_locus_tag=D5F92_10810 NZ_QYTJ01000063.1 Protein Homology CDS 821 2266 . + 0 ID=cds-WP_000533132.1;Parent=gene-D5F92_RS10795;Dbxref=GenBank:WP_000533132.1;Name=WP_000533132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533135.1;locus_tag=D5F92_RS10795;product=CotH kinase family protein;protein_id=WP_000533132.1;transl_table=11 NZ_QYTJ01000063.1 RefSeq gene 2273 4432 . + . ID=gene-D5F92_RS10800;Name=D5F92_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10800;old_locus_tag=D5F92_10815 NZ_QYTJ01000063.1 Protein Homology CDS 2273 4432 . + 0 ID=cds-WP_124749455.1;Parent=gene-D5F92_RS10800;Dbxref=GenBank:WP_124749455.1;Name=WP_124749455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760424.1;locus_tag=D5F92_RS10800;product=hypothetical protein;protein_id=WP_124749455.1;transl_table=11 NZ_QYTJ01000063.1 RefSeq pseudogene 4572 5708 . + . ID=gene-D5F92_RS10805;Name=D5F92_RS10805;end_range=5708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10805;old_locus_tag=D5F92_10820;partial=true;pseudo=true NZ_QYTJ01000063.1 Protein Homology CDS 4572 5708 . + 0 ID=cds-D5F92_RS10805;Parent=gene-D5F92_RS10805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006486,GO:0016757;end_range=5708,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643060.1;locus_tag=D5F92_RS10805;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_QYTJ01000063.1 RefSeq pseudogene 5779 6141 . + . ID=gene-D5F92_RS10810;Name=D5F92_RS10810;end_range=6141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10810;old_locus_tag=D5F92_10825;partial=true;pseudo=true NZ_QYTJ01000063.1 Protein Homology CDS 5779 6141 . + 0 ID=cds-D5F92_RS10810;Parent=gene-D5F92_RS10810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6141,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS10810;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000064.1 1 5665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000064.1 RefSeq region 1 5665 . + . ID=NZ_QYTJ01000064.1:1..5665;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000064.1 RefSeq gene 1 230 . - . ID=gene-D5F92_RS10815;Name=D5F92_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10815;old_locus_tag=D5F92_10830;partial=true;start_range=.,1 NZ_QYTJ01000064.1 Protein Homology CDS 1 230 . - 0 ID=cds-WP_142996899.1;Parent=gene-D5F92_RS10815;Dbxref=GenBank:WP_142996899.1;Name=WP_142996899.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS10815;partial=true;product=transposase;protein_id=WP_142996899.1;start_range=.,1;transl_table=11 NZ_QYTJ01000064.1 RefSeq gene 506 1285 . - . ID=gene-D5F92_RS10820;Name=D5F92_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10820;old_locus_tag=D5F92_10835 NZ_QYTJ01000064.1 Protein Homology CDS 506 1285 . - 0 ID=cds-WP_124785537.1;Parent=gene-D5F92_RS10820;Dbxref=GenBank:WP_124785537.1;Name=WP_124785537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934864.1;locus_tag=D5F92_RS10820;product=hypothetical protein;protein_id=WP_124785537.1;transl_table=11 NZ_QYTJ01000064.1 RefSeq gene 2297 4720 . + . ID=gene-D5F92_RS10830;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=D5F92_RS10830;old_locus_tag=D5F92_10845 NZ_QYTJ01000064.1 Protein Homology CDS 2297 4720 . + 0 ID=cds-WP_124749641.1;Parent=gene-D5F92_RS10830;Dbxref=GenBank:WP_124749641.1;Name=WP_124749641.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988347.1;locus_tag=D5F92_RS10830;product=CRISPR-associated helicase Cas3';protein_id=WP_124749641.1;transl_table=11 NZ_QYTJ01000064.1 RefSeq pseudogene 4853 5227 . + . ID=gene-D5F92_RS10835;Name=cas5c;end_range=5227,.;gbkey=Gene;gene=cas5c;gene_biotype=pseudogene;locus_tag=D5F92_RS10835;old_locus_tag=D5F92_10850;partial=true;pseudo=true NZ_QYTJ01000064.1 Protein Homology CDS 4853 5227 . + 0 ID=cds-D5F92_RS10835;Parent=gene-D5F92_RS10835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043571,GO:0051607,GO:0004519;end_range=5227,.;gbkey=CDS;gene=cas5c;go_function=endonuclease activity|0004519||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011528831.1;locus_tag=D5F92_RS10835;partial=true;product=type I-C CRISPR-associated protein Cas5c;pseudo=true;transl_table=11 NZ_QYTJ01000064.1 RefSeq gene 5263 5665 . - . ID=gene-D5F92_RS10840;Name=D5F92_RS10840;end_range=5665,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10840;old_locus_tag=D5F92_10855;partial=true NZ_QYTJ01000064.1 Protein Homology CDS 5263 5665 . - 1 ID=cds-WP_142996900.1;Parent=gene-D5F92_RS10840;Dbxref=GenBank:WP_142996900.1;Name=WP_142996900.1;Ontology_term=GO:0015074;end_range=5665,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS10840;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_142996900.1;transl_table=11 ##sequence-region NZ_QYTJ01000065.1 1 2043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000065.1 RefSeq region 1 2043 . + . ID=NZ_QYTJ01000065.1:1..2043;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000065.1 cmsearch sequence_feature 204 337 . + . ID=id-NZ_QYTJ01000065.1:204..337;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTJ01000065.1 RefSeq gene 367 867 . + . ID=gene-D5F92_RS10845;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=D5F92_RS10845;old_locus_tag=D5F92_10860 NZ_QYTJ01000065.1 Protein Homology CDS 367 867 . + 0 ID=cds-WP_001287288.1;Parent=gene-D5F92_RS10845;Dbxref=GenBank:WP_001287288.1;Name=WP_001287288.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287287.1;locus_tag=D5F92_RS10845;product=50S ribosomal protein L10;protein_id=WP_001287288.1;transl_table=11 NZ_QYTJ01000065.1 RefSeq gene 931 1296 . + . ID=gene-D5F92_RS10850;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=D5F92_RS10850;old_locus_tag=D5F92_10865 NZ_QYTJ01000065.1 Protein Homology CDS 931 1296 . + 0 ID=cds-WP_001196973.1;Parent=gene-D5F92_RS10850;Dbxref=GenBank:WP_001196973.1;Name=WP_001196973.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=D5F92_RS10850;product=50S ribosomal protein L7/L12;protein_id=WP_001196973.1;transl_table=11 NZ_QYTJ01000065.1 RefSeq pseudogene 1523 1600 . + . ID=gene-D5F92_RS11495;Name=D5F92_RS11495;end_range=1600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11495;old_locus_tag=D5F92_10870;partial=true;pseudo=true NZ_QYTJ01000065.1 Protein Homology CDS 1523 1600 . + 0 ID=cds-D5F92_RS11495;Parent=gene-D5F92_RS11495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873128.1;locus_tag=D5F92_RS11495;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000065.1 RefSeq pseudogene 1689 2043 . + . ID=gene-D5F92_RS10860;Name=D5F92_RS10860;end_range=2043,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10860;old_locus_tag=D5F92_10875;partial=true;pseudo=true NZ_QYTJ01000065.1 Protein Homology CDS 1689 2043 . + 0 ID=cds-D5F92_RS10860;Parent=gene-D5F92_RS10860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2043,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F92_RS10860;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000066.1 1 4059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000066.1 RefSeq region 1 4059 . + . ID=NZ_QYTJ01000066.1:1..4059;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000066.1 RefSeq pseudogene 1 413 . - . ID=gene-D5F92_RS10865;Name=D5F92_RS10865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10865;old_locus_tag=D5F92_10880;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000066.1 Protein Homology CDS 1 413 . - 0 ID=cds-D5F92_RS10865;Parent=gene-D5F92_RS10865;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS10865;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000066.1 RefSeq gene 657 1433 . - . ID=gene-D5F92_RS10870;Name=D5F92_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10870;old_locus_tag=D5F92_10885 NZ_QYTJ01000066.1 Protein Homology CDS 657 1433 . - 0 ID=cds-WP_000919190.1;Parent=gene-D5F92_RS10870;Dbxref=GenBank:WP_000919190.1;Name=WP_000919190.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919193.1;locus_tag=D5F92_RS10870;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000919190.1;transl_table=11 NZ_QYTJ01000066.1 RefSeq gene 1642 2115 . + . ID=gene-D5F92_RS10875;Name=D5F92_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10875;old_locus_tag=D5F92_10890 NZ_QYTJ01000066.1 Protein Homology CDS 1642 2115 . + 0 ID=cds-WP_000458427.1;Parent=gene-D5F92_RS10875;Dbxref=GenBank:WP_000458427.1;Name=WP_000458427.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649570.1;locus_tag=D5F92_RS10875;product=PTS sugar transporter subunit IIA;protein_id=WP_000458427.1;transl_table=11 NZ_QYTJ01000066.1 RefSeq gene 2117 2422 . + . ID=gene-D5F92_RS10880;Name=D5F92_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10880;old_locus_tag=D5F92_10895 NZ_QYTJ01000066.1 Protein Homology CDS 2117 2422 . + 0 ID=cds-WP_000590543.1;Parent=gene-D5F92_RS10880;Dbxref=GenBank:WP_000590543.1;Name=WP_000590543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590540.1;locus_tag=D5F92_RS10880;product=PTS sugar transporter subunit IIB;protein_id=WP_000590543.1;transl_table=11 NZ_QYTJ01000066.1 RefSeq gene 2462 3910 . + . ID=gene-D5F92_RS10885;Name=D5F92_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10885;old_locus_tag=D5F92_10900 NZ_QYTJ01000066.1 Protein Homology CDS 2462 3910 . + 0 ID=cds-WP_124749603.1;Parent=gene-D5F92_RS10885;Dbxref=GenBank:WP_124749603.1;Name=WP_124749603.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195826.1;locus_tag=D5F92_RS10885;product=PTS transporter subunit IIC;protein_id=WP_124749603.1;transl_table=11 ##sequence-region NZ_QYTJ01000067.1 1 7133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000067.1 RefSeq region 1 7133 . + . ID=NZ_QYTJ01000067.1:1..7133;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000067.1 RefSeq gene 77 673 . - . ID=gene-D5F92_RS10890;Name=D5F92_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10890;old_locus_tag=D5F92_10905 NZ_QYTJ01000067.1 Protein Homology CDS 77 673 . - 0 ID=cds-WP_016502724.1;Parent=gene-D5F92_RS10890;Dbxref=GenBank:WP_016502724.1;Name=WP_016502724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502724.1;locus_tag=D5F92_RS10890;product=hypothetical protein;protein_id=WP_016502724.1;transl_table=11 NZ_QYTJ01000067.1 RefSeq pseudogene 806 2236 . - . ID=gene-D5F92_RS10895;Name=D5F92_RS10895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10895;old_locus_tag=D5F92_10910;pseudo=true NZ_QYTJ01000067.1 Protein Homology CDS 806 2236 . - 0 ID=cds-D5F92_RS10895;Parent=gene-D5F92_RS10895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001869561.1;locus_tag=D5F92_RS10895;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_QYTJ01000067.1 RefSeq gene 2452 3447 . + . ID=gene-D5F92_RS11360;Name=D5F92_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11360 NZ_QYTJ01000067.1 Protein Homology CDS 2452 3447 . + 0 ID=cds-WP_016480468.1;Parent=gene-D5F92_RS11360;Dbxref=GenBank:WP_016480468.1;Name=WP_016480468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480468.1;locus_tag=D5F92_RS11360;product=hypothetical protein;protein_id=WP_016480468.1;transl_table=11 NZ_QYTJ01000067.1 RefSeq gene 3449 4066 . + . ID=gene-D5F92_RS10905;Name=D5F92_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10905;old_locus_tag=D5F92_10920 NZ_QYTJ01000067.1 Protein Homology CDS 3449 4066 . + 0 ID=cds-WP_016480467.1;Parent=gene-D5F92_RS10905;Dbxref=GenBank:WP_016480467.1;Name=WP_016480467.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011226260.1;locus_tag=D5F92_RS10905;product=LysE family translocator;protein_id=WP_016480467.1;transl_table=11 NZ_QYTJ01000067.1 RefSeq gene 4159 5607 . - . ID=gene-D5F92_RS10910;Name=D5F92_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10910;old_locus_tag=D5F92_10925 NZ_QYTJ01000067.1 Protein Homology CDS 4159 5607 . - 0 ID=cds-WP_185690649.1;Parent=gene-D5F92_RS10910;Dbxref=GenBank:WP_185690649.1;Name=WP_185690649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.6;locus_tag=D5F92_RS10910;product=AMP-binding protein;protein_id=WP_185690649.1;transl_table=11 NZ_QYTJ01000067.1 RefSeq gene 5600 6181 . - . ID=gene-D5F92_RS10915;Name=D5F92_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10915;old_locus_tag=D5F92_10930 NZ_QYTJ01000067.1 Protein Homology CDS 5600 6181 . - 0 ID=cds-WP_016480464.1;Parent=gene-D5F92_RS10915;Dbxref=GenBank:WP_016480464.1;Name=WP_016480464.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003698160.1;locus_tag=D5F92_RS10915;product=GNAT family N-acetyltransferase;protein_id=WP_016480464.1;transl_table=11 NZ_QYTJ01000067.1 RefSeq gene 6182 7126 . - . ID=gene-D5F92_RS10920;Name=D5F92_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10920;old_locus_tag=D5F92_10935 NZ_QYTJ01000067.1 Protein Homology CDS 6182 7126 . - 0 ID=cds-WP_016480463.1;Parent=gene-D5F92_RS10920;Dbxref=GenBank:WP_016480463.1;Name=WP_016480463.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480463.1;locus_tag=D5F92_RS10920;product=NAD(P)-dependent oxidoreductase;protein_id=WP_016480463.1;transl_table=11 ##sequence-region NZ_QYTJ01000068.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000068.1 RefSeq region 1 760 . + . ID=NZ_QYTJ01000068.1:1..760;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000068.1 RefSeq pseudogene 1 255 . - . ID=gene-D5F92_RS10925;Name=D5F92_RS10925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10925;old_locus_tag=D5F92_10940;partial=true;pseudo=true;start_range=.,1 NZ_QYTJ01000068.1 Protein Homology CDS 1 255 . - 0 ID=cds-D5F92_RS10925;Parent=gene-D5F92_RS10925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F92_RS10925;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTJ01000068.1 RefSeq pseudogene 414 760 . - . ID=gene-D5F92_RS10930;Name=D5F92_RS10930;end_range=760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS10930;old_locus_tag=D5F92_10945;partial=true;pseudo=true NZ_QYTJ01000068.1 Protein Homology CDS 414 760 . - 2 ID=cds-D5F92_RS10930;Parent=gene-D5F92_RS10930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502711.1;locus_tag=D5F92_RS10930;partial=true;product=ImmA/IrrE family metallo-endopeptidase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000069.1 1 4455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000069.1 RefSeq region 1 4455 . + . ID=NZ_QYTJ01000069.1:1..4455;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000069.1 RefSeq gene 1 175 . + . ID=gene-D5F92_RS10935;Name=D5F92_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10935;old_locus_tag=D5F92_10950;partial=true;start_range=.,1 NZ_QYTJ01000069.1 Protein Homology CDS 1 175 . + 1 ID=cds-WP_124785539.1;Parent=gene-D5F92_RS10935;Dbxref=GenBank:WP_124785539.1;Name=WP_124785539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731528.1;locus_tag=D5F92_RS10935;partial=true;product=DUF1310 family protein;protein_id=WP_124785539.1;start_range=.,1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 455 799 . + . ID=gene-D5F92_RS10940;Name=D5F92_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10940;old_locus_tag=D5F92_10955 NZ_QYTJ01000069.1 Protein Homology CDS 455 799 . + 0 ID=cds-WP_124749202.1;Parent=gene-D5F92_RS10940;Dbxref=GenBank:WP_124749202.1;Name=WP_124749202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043246.1;locus_tag=D5F92_RS10940;product=hypothetical protein;protein_id=WP_124749202.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 875 1183 . + . ID=gene-D5F92_RS10945;Name=D5F92_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10945;old_locus_tag=D5F92_10960 NZ_QYTJ01000069.1 Protein Homology CDS 875 1183 . + 0 ID=cds-WP_124749201.1;Parent=gene-D5F92_RS10945;Dbxref=GenBank:WP_124749201.1;Name=WP_124749201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266199.1;locus_tag=D5F92_RS10945;product=hypothetical protein;protein_id=WP_124749201.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 1478 1672 . + . ID=gene-D5F92_RS10950;Name=D5F92_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10950;old_locus_tag=D5F92_10965 NZ_QYTJ01000069.1 Protein Homology CDS 1478 1672 . + 0 ID=cds-WP_124749200.1;Parent=gene-D5F92_RS10950;Dbxref=GenBank:WP_124749200.1;Name=WP_124749200.1;Ontology_term=GO:0044010,GO:0000987,GO:0015643;gbkey=CDS;go_function=cis-regulatory region sequence-specific DNA binding|0000987||IEA,toxic substance binding|0015643||IEA;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108715.1;locus_tag=D5F92_RS10950;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_124749200.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq pseudogene 1771 2096 . - . ID=gene-D5F92_RS11500;Name=D5F92_RS11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11500;old_locus_tag=D5F92_10970;pseudo=true NZ_QYTJ01000069.1 Protein Homology CDS 1771 2096 . - 0 ID=cds-D5F92_RS11500;Parent=gene-D5F92_RS11500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074758.1;locus_tag=D5F92_RS11500;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 2384 2794 . - . ID=gene-D5F92_RS10960;Name=D5F92_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10960;old_locus_tag=D5F92_10975 NZ_QYTJ01000069.1 Protein Homology CDS 2384 2794 . - 0 ID=cds-WP_307777623.1;Parent=gene-D5F92_RS10960;Dbxref=GenBank:WP_307777623.1;Name=WP_307777623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731464.1;locus_tag=D5F92_RS10960;product=hypothetical protein;protein_id=WP_307777623.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 2935 3657 . - . ID=gene-D5F92_RS10965;Name=D5F92_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10965;old_locus_tag=D5F92_10980 NZ_QYTJ01000069.1 Protein Homology CDS 2935 3657 . - 0 ID=cds-WP_124749329.1;Parent=gene-D5F92_RS10965;Dbxref=GenBank:WP_124749329.1;Name=WP_124749329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058816.1;locus_tag=D5F92_RS10965;product=ABC transporter permease;protein_id=WP_124749329.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 3661 4278 . - . ID=gene-D5F92_RS10970;Name=D5F92_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10970;old_locus_tag=D5F92_10985 NZ_QYTJ01000069.1 Protein Homology CDS 3661 4278 . - 0 ID=cds-WP_124758667.1;Parent=gene-D5F92_RS10970;Dbxref=GenBank:WP_124758667.1;Name=WP_124758667.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470461.1;locus_tag=D5F92_RS10970;product=ATP-binding cassette domain-containing protein;protein_id=WP_124758667.1;transl_table=11 NZ_QYTJ01000069.1 RefSeq gene 4312 4413 . - . ID=gene-D5F92_RS10975;Name=D5F92_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10975;old_locus_tag=D5F92_10990 NZ_QYTJ01000069.1 Protein Homology CDS 4312 4413 . - 0 ID=cds-WP_260424799.1;Parent=gene-D5F92_RS10975;Dbxref=GenBank:WP_260424799.1;Name=WP_260424799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810831.1;locus_tag=D5F92_RS10975;product=epipeptide YydF family RiPP;protein_id=WP_260424799.1;transl_table=11 ##sequence-region NZ_QYTJ01000007.1 1 47547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000007.1 RefSeq region 1 47547 . + . ID=NZ_QYTJ01000007.1:1..47547;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000007.1 RefSeq gene 1 507 . + . ID=gene-D5F92_RS01335;Name=D5F92_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01335;old_locus_tag=D5F92_01340;partial=true;start_range=.,1 NZ_QYTJ01000007.1 Protein Homology CDS 1 507 . + 0 ID=cds-WP_142996885.1;Parent=gene-D5F92_RS01335;Dbxref=GenBank:WP_142996885.1;Name=WP_142996885.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723856.1;locus_tag=D5F92_RS01335;partial=true;product=alpha/beta hydrolase;protein_id=WP_142996885.1;start_range=.,1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 554 639 . + . ID=gene-D5F92_RS01340;Name=D5F92_RS01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS01340;old_locus_tag=D5F92_01345 NZ_QYTJ01000007.1 tRNAscan-SE tRNA 554 639 . + . ID=rna-D5F92_RS01340;Parent=gene-D5F92_RS01340;anticodon=(pos:588..590);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS01340;product=tRNA-Leu NZ_QYTJ01000007.1 tRNAscan-SE exon 554 639 . + . ID=exon-D5F92_RS01340-1;Parent=rna-D5F92_RS01340;anticodon=(pos:588..590);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS01340;product=tRNA-Leu NZ_QYTJ01000007.1 RefSeq gene 702 1148 . + . ID=gene-D5F92_RS01345;Name=D5F92_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01345;old_locus_tag=D5F92_01350 NZ_QYTJ01000007.1 Protein Homology CDS 702 1148 . + 0 ID=cds-WP_016502406.1;Parent=gene-D5F92_RS01345;Dbxref=GenBank:WP_016502406.1;Name=WP_016502406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049187.1;locus_tag=D5F92_RS01345;product=dUTP diphosphatase;protein_id=WP_016502406.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 1310 2674 . + . ID=gene-D5F92_RS01350;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=D5F92_RS01350;old_locus_tag=D5F92_01355 NZ_QYTJ01000007.1 Protein Homology CDS 1310 2674 . + 0 ID=cds-WP_124749574.1;Parent=gene-D5F92_RS01350;Dbxref=GenBank:WP_124749574.1;Name=WP_124749574.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650544.1;locus_tag=D5F92_RS01350;product=DNA repair protein RadA;protein_id=WP_124749574.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 2810 3307 . + . ID=gene-D5F92_RS01355;Name=D5F92_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01355;old_locus_tag=D5F92_01360 NZ_QYTJ01000007.1 Protein Homology CDS 2810 3307 . + 0 ID=cds-WP_000214743.1;Parent=gene-D5F92_RS01355;Dbxref=GenBank:WP_000214743.1;Name=WP_000214743.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643839.1;locus_tag=D5F92_RS01355;product=beta-class carbonic anhydrase;protein_id=WP_000214743.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 3461 4780 . + . ID=gene-D5F92_RS01360;Name=D5F92_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01360;old_locus_tag=D5F92_01365 NZ_QYTJ01000007.1 Protein Homology CDS 3461 4780 . + 0 ID=cds-WP_000759711.1;Parent=gene-D5F92_RS01360;Dbxref=GenBank:WP_000759711.1;Name=WP_000759711.1;Ontology_term=GO:0045454,GO:0016668,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631733.1;locus_tag=D5F92_RS01360;product=FAD-containing oxidoreductase;protein_id=WP_000759711.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 4989 6443 . + . ID=gene-D5F92_RS01365;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=D5F92_RS01365;old_locus_tag=D5F92_01370 NZ_QYTJ01000007.1 Protein Homology CDS 4989 6443 . + 0 ID=cds-WP_001284498.1;Parent=gene-D5F92_RS01365;Dbxref=GenBank:WP_001284498.1;Name=WP_001284498.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058297.1;locus_tag=D5F92_RS01365;product=glutamate--tRNA ligase;protein_id=WP_001284498.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 6483 7451 . - . ID=gene-D5F92_RS01370;Name=D5F92_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01370;old_locus_tag=D5F92_01375 NZ_QYTJ01000007.1 Protein Homology CDS 6483 7451 . - 0 ID=cds-WP_000668258.1;Parent=gene-D5F92_RS01370;Dbxref=GenBank:WP_000668258.1;Name=WP_000668258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647360.1;locus_tag=D5F92_RS01370;product=substrate-binding domain-containing protein;protein_id=WP_000668258.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 7504 8445 . - . ID=gene-D5F92_RS01375;Name=D5F92_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01375;old_locus_tag=D5F92_01380 NZ_QYTJ01000007.1 Protein Homology CDS 7504 8445 . - 0 ID=cds-WP_000794185.1;Parent=gene-D5F92_RS01375;Dbxref=GenBank:WP_000794185.1;Name=WP_000794185.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771495.1;locus_tag=D5F92_RS01375;product=ABC transporter permease subunit;protein_id=WP_000794185.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 8447 9925 . - . ID=gene-D5F92_RS01380;Name=D5F92_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01380;old_locus_tag=D5F92_01385 NZ_QYTJ01000007.1 Protein Homology CDS 8447 9925 . - 0 ID=cds-WP_016502410.1;Parent=gene-D5F92_RS01380;Dbxref=GenBank:WP_016502410.1;Name=WP_016502410.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767714.1;locus_tag=D5F92_RS01380;product=sugar ABC transporter ATP-binding protein;protein_id=WP_016502410.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 9941 10339 . - . ID=gene-D5F92_RS01385;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=D5F92_RS01385;old_locus_tag=D5F92_01390 NZ_QYTJ01000007.1 Protein Homology CDS 9941 10339 . - 0 ID=cds-WP_000750737.1;Parent=gene-D5F92_RS01385;Dbxref=GenBank:WP_000750737.1;Name=WP_000750737.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750742.1;locus_tag=D5F92_RS01385;product=D-ribose pyranase;protein_id=WP_000750737.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 10314 11225 . - . ID=gene-D5F92_RS01390;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=D5F92_RS01390;old_locus_tag=D5F92_01395 NZ_QYTJ01000007.1 Protein Homology CDS 10314 11225 . - 0 ID=cds-WP_016502411.1;Parent=gene-D5F92_RS01390;Dbxref=GenBank:WP_016502411.1;Name=WP_016502411.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065863.1;locus_tag=D5F92_RS01390;product=ribokinase;protein_id=WP_016502411.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 11218 12204 . - . ID=gene-D5F92_RS01395;Name=D5F92_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01395;old_locus_tag=D5F92_01400 NZ_QYTJ01000007.1 Protein Homology CDS 11218 12204 . - 0 ID=cds-WP_000104359.1;Parent=gene-D5F92_RS01395;Dbxref=GenBank:WP_000104359.1;Name=WP_000104359.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284954.1;locus_tag=D5F92_RS01395;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000104359.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 12386 13474 . + . ID=gene-D5F92_RS01405;Name=D5F92_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01405;old_locus_tag=D5F92_01410 NZ_QYTJ01000007.1 Protein Homology CDS 12386 13474 . + 0 ID=cds-WP_000017575.1;Parent=gene-D5F92_RS01405;Dbxref=GenBank:WP_000017575.1;Name=WP_000017575.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631737.1;locus_tag=D5F92_RS01405;product=ABC transporter permease;protein_id=WP_000017575.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 13474 14160 . + . ID=gene-D5F92_RS01410;Name=D5F92_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01410;old_locus_tag=D5F92_01415 NZ_QYTJ01000007.1 Protein Homology CDS 13474 14160 . + 0 ID=cds-WP_001274148.1;Parent=gene-D5F92_RS01410;Dbxref=GenBank:WP_001274148.1;Name=WP_001274148.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480208.1;locus_tag=D5F92_RS01410;product=ABC transporter ATP-binding protein;protein_id=WP_001274148.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 14191 14862 . + . ID=gene-D5F92_RS01415;Name=D5F92_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01415;old_locus_tag=D5F92_01420 NZ_QYTJ01000007.1 Protein Homology CDS 14191 14862 . + 0 ID=cds-WP_000590686.1;Parent=gene-D5F92_RS01415;Dbxref=GenBank:WP_000590686.1;Name=WP_000590686.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590685.1;locus_tag=D5F92_RS01415;product=response regulator transcription factor;protein_id=WP_000590686.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 14846 15925 . + . ID=gene-D5F92_RS01420;Name=D5F92_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01420;old_locus_tag=D5F92_01425 NZ_QYTJ01000007.1 Protein Homology CDS 14846 15925 . + 0 ID=cds-WP_180383421.1;Parent=gene-D5F92_RS01420;Dbxref=GenBank:WP_180383421.1;Name=WP_180383421.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771001.1;locus_tag=D5F92_RS01420;product=sensor histidine kinase;protein_id=WP_180383421.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 16079 17269 . + . ID=gene-D5F92_RS01425;Name=D5F92_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01425;old_locus_tag=D5F92_01430 NZ_QYTJ01000007.1 Protein Homology CDS 16079 17269 . + 0 ID=cds-WP_016502414.1;Parent=gene-D5F92_RS01425;Dbxref=GenBank:WP_016502414.1;Name=WP_016502414.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514054.1;locus_tag=D5F92_RS01425;product=argininosuccinate synthase;protein_id=WP_016502414.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 17288 18676 . + . ID=gene-D5F92_RS01430;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=D5F92_RS01430;old_locus_tag=D5F92_01435 NZ_QYTJ01000007.1 Protein Homology CDS 17288 18676 . + 0 ID=cds-WP_000164581.1;Parent=gene-D5F92_RS01430;Dbxref=GenBank:WP_000164581.1;Name=WP_000164581.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771691.1;locus_tag=D5F92_RS01430;product=argininosuccinate lyase;protein_id=WP_000164581.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 18817 19698 . + . ID=gene-D5F92_RS01435;Name=D5F92_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01435;old_locus_tag=D5F92_01440 NZ_QYTJ01000007.1 Protein Homology CDS 18817 19698 . + 0 ID=cds-WP_001018987.1;Parent=gene-D5F92_RS01435;Dbxref=GenBank:WP_001018987.1;Name=WP_001018987.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184946.1;locus_tag=D5F92_RS01435;product=class II fructose-bisphosphate aldolase;protein_id=WP_001018987.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 19783 20700 . - . ID=gene-D5F92_RS01440;Name=D5F92_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01440;old_locus_tag=D5F92_01445 NZ_QYTJ01000007.1 Protein Homology CDS 19783 20700 . - 0 ID=cds-WP_000197048.1;Parent=gene-D5F92_RS01440;Dbxref=GenBank:WP_000197048.1;Name=WP_000197048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197052.1;locus_tag=D5F92_RS01440;product=L-lactate dehydrogenase;protein_id=WP_000197048.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 20939 21127 . + . ID=gene-D5F92_RS01445;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=D5F92_RS01445;old_locus_tag=D5F92_01450 NZ_QYTJ01000007.1 Protein Homology CDS 20939 21127 . + 0 ID=cds-WP_001140949.1;Parent=gene-D5F92_RS01445;Dbxref=GenBank:WP_001140949.1;Name=WP_001140949.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=D5F92_RS01445;product=50S ribosomal protein L28;protein_id=WP_001140949.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 21259 21624 . + . ID=gene-D5F92_RS01450;Name=D5F92_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01450;old_locus_tag=D5F92_01455 NZ_QYTJ01000007.1 Protein Homology CDS 21259 21624 . + 0 ID=cds-WP_000216444.1;Parent=gene-D5F92_RS01450;Dbxref=GenBank:WP_000216444.1;Name=WP_000216444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018365170.1;locus_tag=D5F92_RS01450;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_000216444.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 21624 23288 . + . ID=gene-D5F92_RS01455;Name=D5F92_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01455;old_locus_tag=D5F92_01460 NZ_QYTJ01000007.1 Protein Homology CDS 21624 23288 . + 0 ID=cds-WP_000036700.1;Parent=gene-D5F92_RS01455;Dbxref=GenBank:WP_000036700.1;Name=WP_000036700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036699.1;locus_tag=D5F92_RS01455;product=DAK2 domain-containing protein;protein_id=WP_000036700.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 23436 24320 . + . ID=gene-D5F92_RS01460;Name=D5F92_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01460;old_locus_tag=D5F92_01465 NZ_QYTJ01000007.1 Protein Homology CDS 23436 24320 . + 0 ID=cds-WP_000052520.1;Parent=gene-D5F92_RS01460;Dbxref=GenBank:WP_000052520.1;Name=WP_000052520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052515.1;locus_tag=D5F92_RS01460;product=SPFH domain-containing protein;protein_id=WP_000052520.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 24412 24528 . - . ID=gene-D5F92_RS01465;Name=D5F92_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01465;old_locus_tag=D5F92_01470 NZ_QYTJ01000007.1 Protein Homology CDS 24412 24528 . - 0 ID=cds-WP_000818733.1;Parent=gene-D5F92_RS01465;Dbxref=GenBank:WP_000818733.1;Name=WP_000818733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818732.1;locus_tag=D5F92_RS01465;product=putative metal homeostasis protein;protein_id=WP_000818733.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 24895 25185 . - . ID=gene-D5F92_RS01470;Name=D5F92_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01470;old_locus_tag=D5F92_01475 NZ_QYTJ01000007.1 Protein Homology CDS 24895 25185 . - 0 ID=cds-WP_000768370.1;Parent=gene-D5F92_RS01470;Dbxref=GenBank:WP_000768370.1;Name=WP_000768370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768368.1;locus_tag=D5F92_RS01470;product=hypothetical protein;protein_id=WP_000768370.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 25527 26267 . - . ID=gene-D5F92_RS01475;Name=D5F92_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01475;old_locus_tag=D5F92_01480 NZ_QYTJ01000007.1 Protein Homology CDS 25527 26267 . - 0 ID=cds-WP_000189495.1;Parent=gene-D5F92_RS01475;Dbxref=GenBank:WP_000189495.1;Name=WP_000189495.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063284.1;locus_tag=D5F92_RS01475;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000189495.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 26277 27827 . - . ID=gene-D5F92_RS01480;Name=D5F92_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01480;old_locus_tag=D5F92_01485 NZ_QYTJ01000007.1 Protein Homology CDS 26277 27827 . - 0 ID=cds-WP_000722381.1;Parent=gene-D5F92_RS01480;Dbxref=GenBank:WP_000722381.1;Name=WP_000722381.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722382.1;locus_tag=D5F92_RS01480;product=ABC transporter substrate-binding protein/permease;protein_id=WP_000722381.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 27963 29846 . + . ID=gene-D5F92_RS01485;Name=D5F92_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01485;old_locus_tag=D5F92_01490 NZ_QYTJ01000007.1 Protein Homology CDS 27963 29846 . + 0 ID=cds-WP_086163184.1;Parent=gene-D5F92_RS01485;Dbxref=GenBank:WP_086163184.1;Name=WP_086163184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710501.1;locus_tag=D5F92_RS01485;product=DUF2207 domain-containing protein;protein_id=WP_086163184.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 29892 30731 . + . ID=gene-D5F92_RS01490;Name=D5F92_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01490;old_locus_tag=D5F92_01495 NZ_QYTJ01000007.1 Protein Homology CDS 29892 30731 . + 0 ID=cds-WP_124785412.1;Parent=gene-D5F92_RS01490;Dbxref=GenBank:WP_124785412.1;Name=WP_124785412.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905329.1;locus_tag=D5F92_RS01490;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_124785412.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 30851 31606 . + . ID=gene-D5F92_RS01495;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=D5F92_RS01495;old_locus_tag=D5F92_01500 NZ_QYTJ01000007.1 Protein Homology CDS 30851 31606 . + 0 ID=cds-WP_016502419.1;Parent=gene-D5F92_RS01495;Dbxref=GenBank:WP_016502419.1;Name=WP_016502419.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425372.1;locus_tag=D5F92_RS01495;product=adaptor protein MecA;protein_id=WP_016502419.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 31608 32768 . + . ID=gene-D5F92_RS01500;Name=D5F92_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01500;old_locus_tag=D5F92_01505 NZ_QYTJ01000007.1 Protein Homology CDS 31608 32768 . + 0 ID=cds-WP_000612108.1;Parent=gene-D5F92_RS01500;Dbxref=GenBank:WP_000612108.1;Name=WP_000612108.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612108.1;locus_tag=D5F92_RS01500;product=glycosyltransferase family 4 protein;protein_id=WP_000612108.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 32933 33703 . + . ID=gene-D5F92_RS01505;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=D5F92_RS01505;old_locus_tag=D5F92_01510 NZ_QYTJ01000007.1 Protein Homology CDS 32933 33703 . + 0 ID=cds-WP_000114502.1;Parent=gene-D5F92_RS01505;Dbxref=GenBank:WP_000114502.1;Name=WP_000114502.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114500.1;locus_tag=D5F92_RS01505;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000114502.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 33740 35002 . + . ID=gene-D5F92_RS01510;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=D5F92_RS01510;old_locus_tag=D5F92_01515 NZ_QYTJ01000007.1 Protein Homology CDS 33740 35002 . + 0 ID=cds-WP_086163185.1;Parent=gene-D5F92_RS01510;Dbxref=GenBank:WP_086163185.1;Name=WP_086163185.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019805197.1;locus_tag=D5F92_RS01510;product=Fe-S cluster assembly protein SufD;protein_id=WP_086163185.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 35004 36236 . + . ID=gene-D5F92_RS01515;Name=D5F92_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01515;old_locus_tag=D5F92_01520 NZ_QYTJ01000007.1 Protein Homology CDS 35004 36236 . + 0 ID=cds-WP_016502421.1;Parent=gene-D5F92_RS01515;Dbxref=GenBank:WP_016502421.1;Name=WP_016502421.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173342.1;locus_tag=D5F92_RS01515;product=cysteine desulfurase;protein_id=WP_016502421.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 36223 36666 . + . ID=gene-D5F92_RS01520;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=D5F92_RS01520;old_locus_tag=D5F92_01525 NZ_QYTJ01000007.1 Protein Homology CDS 36223 36666 . + 0 ID=cds-WP_001218456.1;Parent=gene-D5F92_RS01520;Dbxref=GenBank:WP_001218456.1;Name=WP_001218456.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218456.1;locus_tag=D5F92_RS01520;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_001218456.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 36766 38184 . + . ID=gene-D5F92_RS01525;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=D5F92_RS01525;old_locus_tag=D5F92_01530 NZ_QYTJ01000007.1 Protein Homology CDS 36766 38184 . + 0 ID=cds-WP_001289834.1;Parent=gene-D5F92_RS01525;Dbxref=GenBank:WP_001289834.1;Name=WP_001289834.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769002.1;locus_tag=D5F92_RS01525;product=Fe-S cluster assembly protein SufB;protein_id=WP_001289834.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 38255 39436 . - . ID=gene-D5F92_RS01530;Name=D5F92_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01530;old_locus_tag=D5F92_01535 NZ_QYTJ01000007.1 Protein Homology CDS 38255 39436 . - 0 ID=cds-WP_124749026.1;Parent=gene-D5F92_RS01530;Dbxref=GenBank:WP_124749026.1;Name=WP_124749026.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125231.1;locus_tag=D5F92_RS01530;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_124749026.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 39588 40823 . - . ID=gene-D5F92_RS01535;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=D5F92_RS01535;old_locus_tag=D5F92_01540 NZ_QYTJ01000007.1 Protein Homology CDS 39588 40823 . - 0 ID=cds-WP_086163187.1;Parent=gene-D5F92_RS01535;Dbxref=GenBank:WP_086163187.1;Name=WP_086163187.1;gbkey=CDS;gene=pbp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720947.1;locus_tag=D5F92_RS01535;product=D-alanyl-D-alanine carboxypeptidase PBP3;protein_id=WP_086163187.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 41054 42709 . + . ID=gene-D5F92_RS01540;Name=D5F92_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01540;old_locus_tag=D5F92_01545 NZ_QYTJ01000007.1 Protein Homology CDS 41054 42709 . + 0 ID=cds-WP_016502424.1;Parent=gene-D5F92_RS01540;Dbxref=GenBank:WP_016502424.1;Name=WP_016502424.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644211.1;locus_tag=D5F92_RS01540;product=peptide ABC transporter substrate-binding protein;protein_id=WP_016502424.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 42828 43742 . + . ID=gene-D5F92_RS01545;Name=D5F92_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01545;old_locus_tag=D5F92_01550 NZ_QYTJ01000007.1 Protein Homology CDS 42828 43742 . + 0 ID=cds-WP_000598964.1;Parent=gene-D5F92_RS01545;Dbxref=GenBank:WP_000598964.1;Name=WP_000598964.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598968.1;locus_tag=D5F92_RS01545;product=ABC transporter permease;protein_id=WP_000598964.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 43752 44783 . + . ID=gene-D5F92_RS01550;Name=D5F92_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01550;old_locus_tag=D5F92_01555 NZ_QYTJ01000007.1 Protein Homology CDS 43752 44783 . + 0 ID=cds-WP_016480224.1;Parent=gene-D5F92_RS01550;Dbxref=GenBank:WP_016480224.1;Name=WP_016480224.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764054.1;locus_tag=D5F92_RS01550;product=ABC transporter permease;protein_id=WP_016480224.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 44796 45842 . + . ID=gene-D5F92_RS01555;Name=D5F92_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01555;old_locus_tag=D5F92_01560 NZ_QYTJ01000007.1 Protein Homology CDS 44796 45842 . + 0 ID=cds-WP_086163189.1;Parent=gene-D5F92_RS01555;Dbxref=GenBank:WP_086163189.1;Name=WP_086163189.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410286.1;locus_tag=D5F92_RS01555;product=ABC transporter ATP-binding protein;protein_id=WP_086163189.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 45842 46774 . + . ID=gene-D5F92_RS01560;Name=D5F92_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01560;old_locus_tag=D5F92_01565 NZ_QYTJ01000007.1 Protein Homology CDS 45842 46774 . + 0 ID=cds-WP_000138506.1;Parent=gene-D5F92_RS01560;Dbxref=GenBank:WP_000138506.1;Name=WP_000138506.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138505.1;locus_tag=D5F92_RS01560;product=ABC transporter ATP-binding protein;protein_id=WP_000138506.1;transl_table=11 NZ_QYTJ01000007.1 RefSeq gene 47172 47547 . + . ID=gene-D5F92_RS11350;Name=D5F92_RS11350;end_range=47547,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F92_RS11350;partial=true NZ_QYTJ01000007.1 cmsearch rRNA 47172 47547 . + . ID=rna-D5F92_RS11350;Parent=gene-D5F92_RS11350;Dbxref=RFAM:RF00177;end_range=47547,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11350;partial=true;product=16S ribosomal RNA NZ_QYTJ01000007.1 cmsearch exon 47172 47547 . + . ID=exon-D5F92_RS11350-1;Parent=rna-D5F92_RS11350;Dbxref=RFAM:RF00177;end_range=47547,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11350;partial=true;product=16S ribosomal RNA ##sequence-region NZ_QYTJ01000070.1 1 13449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000070.1 RefSeq region 1 13449 . + . ID=NZ_QYTJ01000070.1:1..13449;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000070.1 RefSeq gene 192 2006 . + . ID=gene-D5F92_RS10980;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=D5F92_RS10980;old_locus_tag=D5F92_10995 NZ_QYTJ01000070.1 Protein Homology CDS 192 2006 . + 0 ID=cds-WP_000334317.1;Parent=gene-D5F92_RS10980;Dbxref=GenBank:WP_000334317.1;Name=WP_000334317.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019804802.1;locus_tag=D5F92_RS10980;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334317.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 2168 2497 . + . ID=gene-D5F92_RS10985;Name=D5F92_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10985;old_locus_tag=D5F92_11000 NZ_QYTJ01000070.1 Protein Homology CDS 2168 2497 . + 0 ID=cds-WP_000056782.1;Parent=gene-D5F92_RS10985;Dbxref=GenBank:WP_000056782.1;Name=WP_000056782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056782.1;locus_tag=D5F92_RS10985;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056782.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 2633 3274 . + . ID=gene-D5F92_RS10990;Name=D5F92_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10990;old_locus_tag=D5F92_11005 NZ_QYTJ01000070.1 Protein Homology CDS 2633 3274 . + 0 ID=cds-WP_000120401.1;Parent=gene-D5F92_RS10990;Dbxref=GenBank:WP_000120401.1;Name=WP_000120401.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019323647.1;locus_tag=D5F92_RS10990;product=amino acid ABC transporter permease;protein_id=WP_000120401.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 3284 3913 . + . ID=gene-D5F92_RS10995;Name=D5F92_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS10995;old_locus_tag=D5F92_11010 NZ_QYTJ01000070.1 Protein Homology CDS 3284 3913 . + 0 ID=cds-WP_000891276.1;Parent=gene-D5F92_RS10995;Dbxref=GenBank:WP_000891276.1;Name=WP_000891276.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854102.1;locus_tag=D5F92_RS10995;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000891276.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 3927 4760 . + . ID=gene-D5F92_RS11000;Name=D5F92_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11000;old_locus_tag=D5F92_11015 NZ_QYTJ01000070.1 Protein Homology CDS 3927 4760 . + 0 ID=cds-WP_017649521.1;Parent=gene-D5F92_RS11000;Dbxref=GenBank:WP_017649521.1;Name=WP_017649521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649521.1;locus_tag=D5F92_RS11000;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_017649521.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 4845 5093 . - . ID=gene-D5F92_RS11005;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=D5F92_RS11005;old_locus_tag=D5F92_11020 NZ_QYTJ01000070.1 Protein Homology CDS 4845 5093 . - 0 ID=cds-WP_001872296.1;Parent=gene-D5F92_RS11005;Dbxref=GenBank:WP_001872296.1;Name=WP_001872296.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808726.1;locus_tag=D5F92_RS11005;product=30S ribosomal protein S20;protein_id=WP_001872296.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 5147 6067 . - . ID=gene-D5F92_RS11010;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=D5F92_RS11010;old_locus_tag=D5F92_11025 NZ_QYTJ01000070.1 Protein Homology CDS 5147 6067 . - 0 ID=cds-WP_001058331.1;Parent=gene-D5F92_RS11010;Dbxref=GenBank:WP_001058331.1;Name=WP_001058331.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480725.1;locus_tag=D5F92_RS11010;product=type I pantothenate kinase;protein_id=WP_001058331.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 6173 6763 . + . ID=gene-D5F92_RS11015;Name=D5F92_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11015;old_locus_tag=D5F92_11030 NZ_QYTJ01000070.1 Protein Homology CDS 6173 6763 . + 0 ID=cds-WP_000002665.1;Parent=gene-D5F92_RS11015;Dbxref=GenBank:WP_000002665.1;Name=WP_000002665.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649520.1;locus_tag=D5F92_RS11015;product=class I SAM-dependent methyltransferase;protein_id=WP_000002665.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 7089 7478 . + . ID=gene-D5F92_RS11020;Name=D5F92_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11020;old_locus_tag=D5F92_11035 NZ_QYTJ01000070.1 Protein Homology CDS 7089 7478 . + 0 ID=cds-WP_000526762.1;Parent=gene-D5F92_RS11020;Dbxref=GenBank:WP_000526762.1;Name=WP_000526762.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526762.1;locus_tag=D5F92_RS11020;product=cytidine deaminase;protein_id=WP_000526762.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 7543 8592 . + . ID=gene-D5F92_RS11025;Name=D5F92_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11025;old_locus_tag=D5F92_11040 NZ_QYTJ01000070.1 Protein Homology CDS 7543 8592 . + 0 ID=cds-WP_001034779.1;Parent=gene-D5F92_RS11025;Dbxref=GenBank:WP_001034779.1;Name=WP_001034779.1;Ontology_term=GO:0016020,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019315854.1;locus_tag=D5F92_RS11025;product=BMP family lipoprotein;protein_id=WP_001034779.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 8737 10272 . + . ID=gene-D5F92_RS11030;Name=D5F92_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11030;old_locus_tag=D5F92_11045 NZ_QYTJ01000070.1 Protein Homology CDS 8737 10272 . + 0 ID=cds-WP_124749373.1;Parent=gene-D5F92_RS11030;Dbxref=GenBank:WP_124749373.1;Name=WP_124749373.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193228.1;locus_tag=D5F92_RS11030;product=ABC transporter ATP-binding protein;protein_id=WP_124749373.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 10265 11326 . + . ID=gene-D5F92_RS11035;Name=D5F92_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11035;old_locus_tag=D5F92_11050 NZ_QYTJ01000070.1 Protein Homology CDS 10265 11326 . + 0 ID=cds-WP_000036988.1;Parent=gene-D5F92_RS11035;Dbxref=GenBank:WP_000036988.1;Name=WP_000036988.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768037.1;locus_tag=D5F92_RS11035;product=ABC transporter permease;protein_id=WP_000036988.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 11328 12284 . + . ID=gene-D5F92_RS11040;Name=D5F92_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11040;old_locus_tag=D5F92_11055 NZ_QYTJ01000070.1 Protein Homology CDS 11328 12284 . + 0 ID=cds-WP_000060306.1;Parent=gene-D5F92_RS11040;Dbxref=GenBank:WP_000060306.1;Name=WP_000060306.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060306.1;locus_tag=D5F92_RS11040;product=ABC transporter permease;protein_id=WP_000060306.1;transl_table=11 NZ_QYTJ01000070.1 RefSeq gene 12489 13449 . + . ID=gene-D5F92_RS11045;Name=D5F92_RS11045;end_range=13449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11045;old_locus_tag=D5F92_11060;partial=true NZ_QYTJ01000070.1 Protein Homology CDS 12489 13449 . + 0 ID=cds-WP_124785541.1;Parent=gene-D5F92_RS11045;Dbxref=GenBank:WP_124785541.1;Name=WP_124785541.1;Ontology_term=GO:0000166,GO:0016491;end_range=13449,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647149.1;locus_tag=D5F92_RS11045;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_124785541.1;transl_table=11 ##sequence-region NZ_QYTJ01000071.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000071.1 RefSeq region 1 639 . + . ID=NZ_QYTJ01000071.1:1..639;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000071.1 RefSeq gene 164 639 . + . ID=gene-D5F92_RS11050;Name=D5F92_RS11050;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11050;old_locus_tag=D5F92_11065;partial=true NZ_QYTJ01000071.1 Protein Homology CDS 164 639 . + 0 ID=cds-WP_260426624.1;Parent=gene-D5F92_RS11050;Dbxref=GenBank:WP_260426624.1;Name=WP_260426624.1;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767573.1;locus_tag=D5F92_RS11050;partial=true;product=polyphosphate polymerase domain-containing protein;protein_id=WP_260426624.1;transl_table=11 ##sequence-region NZ_QYTJ01000072.1 1 1829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000072.1 RefSeq region 1 1829 . + . ID=NZ_QYTJ01000072.1:1..1829;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000072.1 RefSeq pseudogene 107 214 . - . ID=gene-D5F92_RS11055;Name=D5F92_RS11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11055;old_locus_tag=D5F92_11070;partial=true;pseudo=true;start_range=.,107 NZ_QYTJ01000072.1 Protein Homology CDS 107 214 . - 0 ID=cds-D5F92_RS11055;Parent=gene-D5F92_RS11055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018164041.1;locus_tag=D5F92_RS11055;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,107;transl_table=11 NZ_QYTJ01000072.1 RefSeq gene 250 495 . - . ID=gene-D5F92_RS11060;Name=D5F92_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11060;old_locus_tag=D5F92_11075 NZ_QYTJ01000072.1 Protein Homology CDS 250 495 . - 0 ID=cds-WP_016480453.1;Parent=gene-D5F92_RS11060;Dbxref=GenBank:WP_016480453.1;Name=WP_016480453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205112.1;locus_tag=D5F92_RS11060;product=hypothetical protein;protein_id=WP_016480453.1;transl_table=11 NZ_QYTJ01000072.1 RefSeq gene 1080 1433 . + . ID=gene-D5F92_RS11065;Name=D5F92_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11065;old_locus_tag=D5F92_11080 NZ_QYTJ01000072.1 Protein Homology CDS 1080 1433 . + 0 ID=cds-WP_016480454.1;Parent=gene-D5F92_RS11065;Dbxref=GenBank:WP_016480454.1;Name=WP_016480454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000395811.1;locus_tag=D5F92_RS11065;product=helix-turn-helix domain-containing protein;protein_id=WP_016480454.1;transl_table=11 NZ_QYTJ01000072.1 RefSeq gene 1510 1689 . + . ID=gene-D5F92_RS11070;Name=D5F92_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11070;old_locus_tag=D5F92_11085 NZ_QYTJ01000072.1 Protein Homology CDS 1510 1689 . + 0 ID=cds-WP_016480455.1;Parent=gene-D5F92_RS11070;Dbxref=GenBank:WP_016480455.1;Name=WP_016480455.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480455.1;locus_tag=D5F92_RS11070;product=helix-turn-helix transcriptional regulator;protein_id=WP_016480455.1;transl_table=11 ##sequence-region NZ_QYTJ01000073.1 1 5756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000073.1 RefSeq region 1 5756 . + . ID=NZ_QYTJ01000073.1:1..5756;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000073.1 RefSeq gene 1 279 . + . ID=gene-D5F92_RS11075;Name=D5F92_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11075;old_locus_tag=D5F92_11090;partial=true;start_range=.,1 NZ_QYTJ01000073.1 Protein Homology CDS 1 279 . + 0 ID=cds-WP_142996902.1;Parent=gene-D5F92_RS11075;Dbxref=GenBank:WP_142996902.1;Name=WP_142996902.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226747.1;locus_tag=D5F92_RS11075;partial=true;product=transposase;protein_id=WP_142996902.1;start_range=.,1;transl_table=11 NZ_QYTJ01000073.1 RefSeq gene 239 1138 . - . ID=gene-D5F92_RS11080;Name=D5F92_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11080;old_locus_tag=D5F92_11095 NZ_QYTJ01000073.1 Protein Homology CDS 239 1138 . - 0 ID=cds-WP_016502714.1;Parent=gene-D5F92_RS11080;Dbxref=GenBank:WP_016502714.1;Name=WP_016502714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502714.1;locus_tag=D5F92_RS11080;product=helix-turn-helix domain-containing protein;protein_id=WP_016502714.1;transl_table=11 NZ_QYTJ01000073.1 RefSeq gene 1343 1918 . + . ID=gene-D5F92_RS11085;Name=D5F92_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11085;old_locus_tag=D5F92_11100 NZ_QYTJ01000073.1 Protein Homology CDS 1343 1918 . + 0 ID=cds-WP_016480459.1;Parent=gene-D5F92_RS11085;Dbxref=GenBank:WP_016480459.1;Name=WP_016480459.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480459.1;locus_tag=D5F92_RS11085;product=histidine phosphatase family protein;protein_id=WP_016480459.1;transl_table=11 NZ_QYTJ01000073.1 RefSeq gene 1920 3587 . + . ID=gene-D5F92_RS11090;Name=D5F92_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11090;old_locus_tag=D5F92_11105 NZ_QYTJ01000073.1 Protein Homology CDS 1920 3587 . + 0 ID=cds-WP_124785543.1;Parent=gene-D5F92_RS11090;Dbxref=GenBank:WP_124785543.1;Name=WP_124785543.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480460.1;locus_tag=D5F92_RS11090;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_124785543.1;transl_table=11 NZ_QYTJ01000073.1 RefSeq gene 3609 5756 . + . ID=gene-D5F92_RS11095;Name=D5F92_RS11095;end_range=5756,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11095;old_locus_tag=D5F92_11110;partial=true NZ_QYTJ01000073.1 Protein Homology CDS 3609 5756 . + 0 ID=cds-WP_124785545.1;Parent=gene-D5F92_RS11095;Dbxref=GenBank:WP_124785545.1;Name=WP_124785545.1;end_range=5756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480461.1;locus_tag=D5F92_RS11095;partial=true;product=AMP-binding protein;protein_id=WP_124785545.1;transl_table=11 ##sequence-region NZ_QYTJ01000074.1 1 1211 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000074.1 RefSeq region 1 1211 . + . ID=NZ_QYTJ01000074.1:1..1211;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000074.1 RefSeq gene 1 498 . - . ID=gene-D5F92_RS11100;Name=D5F92_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11100;old_locus_tag=D5F92_11115;partial=true;start_range=.,1 NZ_QYTJ01000074.1 Protein Homology CDS 1 498 . - 0 ID=cds-WP_124785547.1;Parent=gene-D5F92_RS11100;Dbxref=GenBank:WP_124785547.1;Name=WP_124785547.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480462.1;locus_tag=D5F92_RS11100;partial=true;product=MFS transporter;protein_id=WP_124785547.1;start_range=.,1;transl_table=11 NZ_QYTJ01000074.1 RefSeq pseudogene 471 1211 . - . ID=gene-D5F92_RS11105;Name=D5F92_RS11105;end_range=1211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11105;old_locus_tag=D5F92_11120;partial=true;pseudo=true NZ_QYTJ01000074.1 Protein Homology CDS 471 1211 . - 0 ID=cds-D5F92_RS11105;Parent=gene-D5F92_RS11105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1211,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480461.1;locus_tag=D5F92_RS11105;partial=true;product=AMP-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000075.1 1 4687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000075.1 RefSeq region 1 4687 . + . ID=NZ_QYTJ01000075.1:1..4687;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000075.1 RefSeq gene 107 222 . + . ID=gene-D5F92_RS11110;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F92_RS11110;old_locus_tag=D5F92_11125 NZ_QYTJ01000075.1 cmsearch rRNA 107 222 . + . ID=rna-D5F92_RS11110;Parent=gene-D5F92_RS11110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11110;product=5S ribosomal RNA NZ_QYTJ01000075.1 cmsearch exon 107 222 . + . ID=exon-D5F92_RS11110-1;Parent=rna-D5F92_RS11110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F92_RS11110;product=5S ribosomal RNA NZ_QYTJ01000075.1 RefSeq gene 226 298 . + . ID=gene-D5F92_RS11115;Name=D5F92_RS11115;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11115;old_locus_tag=D5F92_11130 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 226 298 . + . ID=rna-D5F92_RS11115;Parent=gene-D5F92_RS11115;anticodon=(pos:259..261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11115;product=tRNA-Val NZ_QYTJ01000075.1 tRNAscan-SE exon 226 298 . + . ID=exon-D5F92_RS11115-1;Parent=rna-D5F92_RS11115;anticodon=(pos:259..261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11115;product=tRNA-Val NZ_QYTJ01000075.1 RefSeq gene 304 374 . + . ID=gene-D5F92_RS11120;Name=D5F92_RS11120;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11120;old_locus_tag=D5F92_11135 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 304 374 . + . ID=rna-D5F92_RS11120;Parent=gene-D5F92_RS11120;anticodon=(pos:336..338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11120;product=tRNA-Gly NZ_QYTJ01000075.1 tRNAscan-SE exon 304 374 . + . ID=exon-D5F92_RS11120-1;Parent=rna-D5F92_RS11120;anticodon=(pos:336..338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11120;product=tRNA-Gly NZ_QYTJ01000075.1 RefSeq gene 411 484 . + . ID=gene-D5F92_RS11125;Name=D5F92_RS11125;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11125;old_locus_tag=D5F92_11140 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 411 484 . + . ID=rna-D5F92_RS11125;Parent=gene-D5F92_RS11125;anticodon=(pos:445..447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11125;product=tRNA-Ile NZ_QYTJ01000075.1 tRNAscan-SE exon 411 484 . + . ID=exon-D5F92_RS11125-1;Parent=rna-D5F92_RS11125;anticodon=(pos:445..447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11125;product=tRNA-Ile NZ_QYTJ01000075.1 RefSeq gene 495 566 . + . ID=gene-D5F92_RS11130;Name=D5F92_RS11130;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11130;old_locus_tag=D5F92_11145 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 495 566 . + . ID=rna-D5F92_RS11130;Parent=gene-D5F92_RS11130;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11130;product=tRNA-Glu NZ_QYTJ01000075.1 tRNAscan-SE exon 495 566 . + . ID=exon-D5F92_RS11130-1;Parent=rna-D5F92_RS11130;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11130;product=tRNA-Glu NZ_QYTJ01000075.1 RefSeq gene 580 669 . + . ID=gene-D5F92_RS11135;Name=D5F92_RS11135;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11135;old_locus_tag=D5F92_11150 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 580 669 . + . ID=rna-D5F92_RS11135;Parent=gene-D5F92_RS11135;anticodon=(pos:616..618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11135;product=tRNA-Ser NZ_QYTJ01000075.1 tRNAscan-SE exon 580 669 . + . ID=exon-D5F92_RS11135-1;Parent=rna-D5F92_RS11135;anticodon=(pos:616..618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11135;product=tRNA-Ser NZ_QYTJ01000075.1 RefSeq gene 680 753 . + . ID=gene-D5F92_RS11140;Name=D5F92_RS11140;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11140;old_locus_tag=D5F92_11155 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 680 753 . + . ID=rna-D5F92_RS11140;Parent=gene-D5F92_RS11140;anticodon=(pos:714..716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11140;product=tRNA-Met NZ_QYTJ01000075.1 tRNAscan-SE exon 680 753 . + . ID=exon-D5F92_RS11140-1;Parent=rna-D5F92_RS11140;anticodon=(pos:714..716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11140;product=tRNA-Met NZ_QYTJ01000075.1 RefSeq gene 756 828 . + . ID=gene-D5F92_RS11145;Name=D5F92_RS11145;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11145;old_locus_tag=D5F92_11160 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 756 828 . + . ID=rna-D5F92_RS11145;Parent=gene-D5F92_RS11145;anticodon=(pos:789..791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11145;product=tRNA-Phe NZ_QYTJ01000075.1 tRNAscan-SE exon 756 828 . + . ID=exon-D5F92_RS11145-1;Parent=rna-D5F92_RS11145;anticodon=(pos:789..791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11145;product=tRNA-Phe NZ_QYTJ01000075.1 RefSeq gene 840 920 . + . ID=gene-D5F92_RS11150;Name=D5F92_RS11150;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11150;old_locus_tag=D5F92_11165 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 840 920 . + . ID=rna-D5F92_RS11150;Parent=gene-D5F92_RS11150;anticodon=(pos:874..876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11150;product=tRNA-Tyr NZ_QYTJ01000075.1 tRNAscan-SE exon 840 920 . + . ID=exon-D5F92_RS11150-1;Parent=rna-D5F92_RS11150;anticodon=(pos:874..876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11150;product=tRNA-Tyr NZ_QYTJ01000075.1 RefSeq gene 927 997 . + . ID=gene-D5F92_RS11155;Name=D5F92_RS11155;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11155;old_locus_tag=D5F92_11170 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 927 997 . + . ID=rna-D5F92_RS11155;Parent=gene-D5F92_RS11155;anticodon=(pos:959..961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11155;product=tRNA-Trp NZ_QYTJ01000075.1 tRNAscan-SE exon 927 997 . + . ID=exon-D5F92_RS11155-1;Parent=rna-D5F92_RS11155;anticodon=(pos:959..961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11155;product=tRNA-Trp NZ_QYTJ01000075.1 RefSeq gene 1012 1084 . + . ID=gene-D5F92_RS11160;Name=D5F92_RS11160;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11160;old_locus_tag=D5F92_11175 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 1012 1084 . + . ID=rna-D5F92_RS11160;Parent=gene-D5F92_RS11160;anticodon=(pos:1045..1047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11160;product=tRNA-His NZ_QYTJ01000075.1 tRNAscan-SE exon 1012 1084 . + . ID=exon-D5F92_RS11160-1;Parent=rna-D5F92_RS11160;anticodon=(pos:1045..1047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11160;product=tRNA-His NZ_QYTJ01000075.1 RefSeq gene 1091 1162 . + . ID=gene-D5F92_RS11165;Name=D5F92_RS11165;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11165;old_locus_tag=D5F92_11180 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 1091 1162 . + . ID=rna-D5F92_RS11165;Parent=gene-D5F92_RS11165;anticodon=(pos:1123..1125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11165;product=tRNA-Gln NZ_QYTJ01000075.1 tRNAscan-SE exon 1091 1162 . + . ID=exon-D5F92_RS11165-1;Parent=rna-D5F92_RS11165;anticodon=(pos:1123..1125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11165;product=tRNA-Gln NZ_QYTJ01000075.1 RefSeq gene 1173 1256 . + . ID=gene-D5F92_RS11170;Name=D5F92_RS11170;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS11170;old_locus_tag=D5F92_11185 NZ_QYTJ01000075.1 tRNAscan-SE tRNA 1173 1256 . + . ID=rna-D5F92_RS11170;Parent=gene-D5F92_RS11170;anticodon=(pos:1207..1209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11170;product=tRNA-Leu NZ_QYTJ01000075.1 tRNAscan-SE exon 1173 1256 . + . ID=exon-D5F92_RS11170-1;Parent=rna-D5F92_RS11170;anticodon=(pos:1207..1209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS11170;product=tRNA-Leu NZ_QYTJ01000075.1 RefSeq gene 1670 2101 . + . ID=gene-D5F92_RS11455;Name=D5F92_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11455 NZ_QYTJ01000075.1 Protein Homology CDS 1670 2101 . + 0 ID=cds-WP_000761053.1;Parent=gene-D5F92_RS11455;Dbxref=GenBank:WP_000761053.1;Name=WP_000761053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480188.1;locus_tag=D5F92_RS11455;product=hypothetical protein;protein_id=WP_000761053.1;transl_table=11 NZ_QYTJ01000075.1 RefSeq gene 2171 2341 . + . ID=gene-D5F92_RS11185;Name=D5F92_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11185;old_locus_tag=D5F92_11200 NZ_QYTJ01000075.1 Protein Homology CDS 2171 2341 . + 0 ID=cds-WP_000840973.1;Parent=gene-D5F92_RS11185;Dbxref=GenBank:WP_000840973.1;Name=WP_000840973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840973.1;locus_tag=D5F92_RS11185;product=hypothetical protein;protein_id=WP_000840973.1;transl_table=11 NZ_QYTJ01000075.1 RefSeq gene 3257 3808 . + . ID=gene-D5F92_RS11190;Name=D5F92_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11190;old_locus_tag=D5F92_11205 NZ_QYTJ01000075.1 Protein Homology CDS 3257 3808 . + 0 ID=cds-WP_000161847.1;Parent=gene-D5F92_RS11190;Dbxref=GenBank:WP_000161847.1;Name=WP_000161847.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631726.1;locus_tag=D5F92_RS11190;product=nucleotidyltransferase family protein;protein_id=WP_000161847.1;transl_table=11 NZ_QYTJ01000075.1 RefSeq pseudogene 4034 4446 . + . ID=gene-D5F92_RS11195;Name=D5F92_RS11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11195;old_locus_tag=D5F92_11210;pseudo=true NZ_QYTJ01000075.1 Protein Homology CDS 4034 4446 . + 0 ID=cds-D5F92_RS11195;Parent=gene-D5F92_RS11195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022654.6;locus_tag=D5F92_RS11195;product=YjdF family protein;pseudo=true;transl_table=11 NZ_QYTJ01000075.1 RefSeq pseudogene 4516 4687 . - . ID=gene-D5F92_RS11200;Name=D5F92_RS11200;end_range=4687,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11200;old_locus_tag=D5F92_11215;partial=true;pseudo=true NZ_QYTJ01000075.1 Protein Homology CDS 4516 4687 . - 1 ID=cds-D5F92_RS11200;Parent=gene-D5F92_RS11200;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS11200;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000076.1 1 2603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000076.1 RefSeq region 1 2603 . + . ID=NZ_QYTJ01000076.1:1..2603;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000076.1 RefSeq gene 1 246 . - . ID=gene-D5F92_RS11205;Name=D5F92_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11205;old_locus_tag=D5F92_11220;partial=true;start_range=.,1 NZ_QYTJ01000076.1 Protein Homology CDS 1 246 . - 0 ID=cds-WP_142996891.1-2;Parent=gene-D5F92_RS11205;Dbxref=GenBank:WP_142996891.1;Name=WP_142996891.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS11205;partial=true;product=transposase;protein_id=WP_142996891.1;start_range=.,1;transl_table=11 NZ_QYTJ01000076.1 RefSeq pseudogene 313 462 . + . ID=gene-D5F92_RS11210;Name=D5F92_RS11210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11210;old_locus_tag=D5F92_11225;partial=true;pseudo=true;start_range=.,313 NZ_QYTJ01000076.1 Protein Homology CDS 313 462 . + 0 ID=cds-D5F92_RS11210;Parent=gene-D5F92_RS11210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643107.1;locus_tag=D5F92_RS11210;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,313;transl_table=11 NZ_QYTJ01000076.1 RefSeq gene 465 1562 . + . ID=gene-D5F92_RS11215;Name=D5F92_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11215;old_locus_tag=D5F92_11230 NZ_QYTJ01000076.1 Protein Homology CDS 465 1562 . + 0 ID=cds-WP_016480275.1;Parent=gene-D5F92_RS11215;Dbxref=GenBank:WP_016480275.1;Name=WP_016480275.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767061.1;locus_tag=D5F92_RS11215;product=ABC transporter permease;protein_id=WP_016480275.1;transl_table=11 NZ_QYTJ01000076.1 RefSeq gene 1586 2194 . + . ID=gene-D5F92_RS11220;Name=D5F92_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11220;old_locus_tag=D5F92_11235 NZ_QYTJ01000076.1 Protein Homology CDS 1586 2194 . + 0 ID=cds-WP_016480274.1;Parent=gene-D5F92_RS11220;Dbxref=GenBank:WP_016480274.1;Name=WP_016480274.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794358.1;locus_tag=D5F92_RS11220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_016480274.1;transl_table=11 ##sequence-region NZ_QYTJ01000077.1 1 1301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000077.1 RefSeq region 1 1301 . + . ID=NZ_QYTJ01000077.1:1..1301;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000077.1 RefSeq gene 52 813 . - . ID=gene-D5F92_RS11230;Name=D5F92_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11230;old_locus_tag=D5F92_11245 NZ_QYTJ01000077.1 Protein Homology CDS 52 813 . - 0 ID=cds-WP_079269279.1;Parent=gene-D5F92_RS11230;Dbxref=GenBank:WP_079269279.1;Name=WP_079269279.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.6;locus_tag=D5F92_RS11230;product=AbiH family protein;protein_id=WP_079269279.1;transl_table=11 NZ_QYTJ01000077.1 RefSeq pseudogene 983 1301 . + . ID=gene-D5F92_RS11235;Name=D5F92_RS11235;end_range=1301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11235;old_locus_tag=D5F92_11250;partial=true;pseudo=true NZ_QYTJ01000077.1 Protein Homology CDS 983 1301 . + 0 ID=cds-D5F92_RS11235;Parent=gene-D5F92_RS11235;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F92_RS11235;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000078.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000078.1 RefSeq region 1 651 . + . ID=NZ_QYTJ01000078.1:1..651;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000078.1 RefSeq gene 1 651 . + . ID=gene-D5F92_RS11240;Name=D5F92_RS11240;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11240;old_locus_tag=D5F92_11255;partial=true;start_range=.,1 NZ_QYTJ01000078.1 Protein Homology CDS 1 651 . + 1 ID=cds-WP_185690650.1;Parent=gene-D5F92_RS11240;Dbxref=GenBank:WP_185690650.1;Name=WP_185690650.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;end_range=651,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=D5F92_RS11240;partial=true;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_185690650.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QYTJ01000079.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000079.1 RefSeq region 1 1148 . + . ID=NZ_QYTJ01000079.1:1..1148;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000079.1 RefSeq gene 221 1108 . - . ID=gene-D5F92_RS11245;Name=D5F92_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11245;old_locus_tag=D5F92_11260 NZ_QYTJ01000079.1 Protein Homology CDS 221 1108 . - 0 ID=cds-WP_016502728.1;Parent=gene-D5F92_RS11245;Dbxref=GenBank:WP_016502728.1;Name=WP_016502728.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049649.1;locus_tag=D5F92_RS11245;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016502728.1;transl_table=11 ##sequence-region NZ_QYTJ01000008.1 1 57067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000008.1 RefSeq region 1 57067 . + . ID=NZ_QYTJ01000008.1:1..57067;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000008.1 RefSeq pseudogene 242 1097 . - . ID=gene-D5F92_RS01565;Name=D5F92_RS01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS01565;old_locus_tag=D5F92_01575;pseudo=true NZ_QYTJ01000008.1 Protein Homology CDS 242 1097 . - 0 ID=cds-D5F92_RS01565;Parent=gene-D5F92_RS01565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204135.1;locus_tag=D5F92_RS01565;product=aminoglycoside 6-adenylyltransferase;pseudo=true;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 1464 2060 . + . ID=gene-D5F92_RS01570;Name=D5F92_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01570;old_locus_tag=D5F92_01580 NZ_QYTJ01000008.1 Protein Homology CDS 1464 2060 . + 0 ID=cds-WP_016503307.1;Parent=gene-D5F92_RS01570;Dbxref=GenBank:WP_016503307.1;Name=WP_016503307.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846439.1;locus_tag=D5F92_RS01570;product=uridine kinase family protein;protein_id=WP_016503307.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 2095 2652 . - . ID=gene-D5F92_RS01575;Name=D5F92_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01575;old_locus_tag=D5F92_01585 NZ_QYTJ01000008.1 Protein Homology CDS 2095 2652 . - 0 ID=cds-WP_000207508.1;Parent=gene-D5F92_RS01575;Dbxref=GenBank:WP_000207508.1;Name=WP_000207508.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207508.1;locus_tag=D5F92_RS01575;product=histidine phosphatase family protein;protein_id=WP_000207508.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 2689 3024 . - . ID=gene-D5F92_RS01580;Name=D5F92_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01580;old_locus_tag=D5F92_01590 NZ_QYTJ01000008.1 Protein Homology CDS 2689 3024 . - 0 ID=cds-WP_000827865.1;Parent=gene-D5F92_RS01580;Dbxref=GenBank:WP_000827865.1;Name=WP_000827865.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827864.1;locus_tag=D5F92_RS01580;product=PadR family transcriptional regulator;protein_id=WP_000827865.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 3547 4035 . - . ID=gene-D5F92_RS01585;Name=D5F92_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01585;old_locus_tag=D5F92_01595 NZ_QYTJ01000008.1 Protein Homology CDS 3547 4035 . - 0 ID=cds-WP_000403109.1;Parent=gene-D5F92_RS01585;Dbxref=GenBank:WP_000403109.1;Name=WP_000403109.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403115.1;locus_tag=D5F92_RS01585;product=GNAT family N-acetyltransferase;protein_id=WP_000403109.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 4204 4965 . - . ID=gene-D5F92_RS01590;Name=D5F92_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01590;old_locus_tag=D5F92_01600 NZ_QYTJ01000008.1 Protein Homology CDS 4204 4965 . - 0 ID=cds-WP_000838136.1;Parent=gene-D5F92_RS01590;Dbxref=GenBank:WP_000838136.1;Name=WP_000838136.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838141.1;locus_tag=D5F92_RS01590;product=ABC transporter permease;protein_id=WP_000838136.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 4962 5864 . - . ID=gene-D5F92_RS01595;Name=D5F92_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01595;old_locus_tag=D5F92_01605 NZ_QYTJ01000008.1 Protein Homology CDS 4962 5864 . - 0 ID=cds-WP_000644459.1;Parent=gene-D5F92_RS01595;Dbxref=GenBank:WP_000644459.1;Name=WP_000644459.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644451.1;locus_tag=D5F92_RS01595;product=ABC transporter ATP-binding protein;protein_id=WP_000644459.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 5861 6067 . - . ID=gene-D5F92_RS01600;Name=D5F92_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01600;old_locus_tag=D5F92_01610 NZ_QYTJ01000008.1 Protein Homology CDS 5861 6067 . - 0 ID=cds-WP_001090962.1;Parent=gene-D5F92_RS01600;Dbxref=GenBank:WP_001090962.1;Name=WP_001090962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090962.1;locus_tag=D5F92_RS01600;product=PLDc N-terminal domain-containing protein;protein_id=WP_001090962.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 6069 7145 . - . ID=gene-D5F92_RS01605;Name=D5F92_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01605;old_locus_tag=D5F92_01615 NZ_QYTJ01000008.1 Protein Homology CDS 6069 7145 . - 0 ID=cds-WP_000900242.1;Parent=gene-D5F92_RS01605;Dbxref=GenBank:WP_000900242.1;Name=WP_000900242.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900237.1;locus_tag=D5F92_RS01605;product=helix-turn-helix domain-containing protein;protein_id=WP_000900242.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 7169 7378 . - . ID=gene-D5F92_RS11460;Name=D5F92_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11460;old_locus_tag=D5F92_01620 NZ_QYTJ01000008.1 Protein Homology CDS 7169 7378 . - 0 ID=cds-WP_086163520.1;Parent=gene-D5F92_RS11460;Dbxref=GenBank:WP_086163520.1;Name=WP_086163520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108133.1;locus_tag=D5F92_RS11460;product=hypothetical protein;protein_id=WP_086163520.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 7394 8008 . - . ID=gene-D5F92_RS01615;Name=D5F92_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01615;old_locus_tag=D5F92_01625 NZ_QYTJ01000008.1 Protein Homology CDS 7394 8008 . - 0 ID=cds-WP_016503314.1;Parent=gene-D5F92_RS01615;Dbxref=GenBank:WP_016503314.1;Name=WP_016503314.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035912.1;locus_tag=D5F92_RS01615;product=phosphatase PAP2 family protein;protein_id=WP_016503314.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 8222 8539 . + . ID=gene-D5F92_RS01620;Name=D5F92_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01620;old_locus_tag=D5F92_01630 NZ_QYTJ01000008.1 Protein Homology CDS 8222 8539 . + 0 ID=cds-WP_016503315.1;Parent=gene-D5F92_RS01620;Dbxref=GenBank:WP_016503315.1;Name=WP_016503315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503315.1;locus_tag=D5F92_RS01620;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_016503315.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq pseudogene 8536 9096 . + . ID=gene-D5F92_RS01625;Name=D5F92_RS01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS01625;old_locus_tag=D5F92_01635;pseudo=true NZ_QYTJ01000008.1 Protein Homology CDS 8536 9096 . + 0 ID=cds-D5F92_RS01625;Parent=gene-D5F92_RS01625;Note=internal stop;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223122.1;locus_tag=D5F92_RS01625;product=LOG family protein;pseudo=true;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 9401 10264 . + . ID=gene-D5F92_RS01630;Name=D5F92_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01630;old_locus_tag=D5F92_01640 NZ_QYTJ01000008.1 Protein Homology CDS 9401 10264 . + 0 ID=cds-WP_016503317.1;Parent=gene-D5F92_RS01630;Dbxref=GenBank:WP_016503317.1;Name=WP_016503317.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071061.1;locus_tag=D5F92_RS01630;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016503317.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 10421 10723 . - . ID=gene-D5F92_RS01635;Name=D5F92_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01635;old_locus_tag=D5F92_01645 NZ_QYTJ01000008.1 Protein Homology CDS 10421 10723 . - 0 ID=cds-WP_000162433.1;Parent=gene-D5F92_RS01635;Dbxref=GenBank:WP_000162433.1;Name=WP_000162433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162432.1;locus_tag=D5F92_RS01635;product=rhodanese-like domain-containing protein;protein_id=WP_000162433.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 10896 11663 . - . ID=gene-D5F92_RS01640;Name=cfb;gbkey=Gene;gene=cfb;gene_biotype=protein_coding;locus_tag=D5F92_RS01640;old_locus_tag=D5F92_01650 NZ_QYTJ01000008.1 Protein Homology CDS 10896 11663 . - 0 ID=cds-WP_001101132.1;Parent=gene-D5F92_RS01640;Dbxref=GenBank:WP_001101132.1;Name=WP_001101132.1;gbkey=CDS;gene=cfb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101136.1;locus_tag=D5F92_RS01640;product=CAMP factor pore-forming toxin Cfb-I;protein_id=WP_001101132.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 12432 12971 . + . ID=gene-D5F92_RS01650;Name=D5F92_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01650;old_locus_tag=D5F92_01660 NZ_QYTJ01000008.1 Protein Homology CDS 12432 12971 . + 0 ID=cds-WP_000684245.1;Parent=gene-D5F92_RS01650;Dbxref=GenBank:WP_000684245.1;Name=WP_000684245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647778.1;locus_tag=D5F92_RS01650;product=DNA topology modulation protein;protein_id=WP_000684245.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 13172 14257 . + . ID=gene-D5F92_RS01655;Name=D5F92_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01655;old_locus_tag=D5F92_01665 NZ_QYTJ01000008.1 Protein Homology CDS 13172 14257 . + 0 ID=cds-WP_000210838.1;Parent=gene-D5F92_RS01655;Dbxref=GenBank:WP_000210838.1;Name=WP_000210838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644856.1;locus_tag=D5F92_RS01655;product=iron-containing alcohol dehydrogenase family protein;protein_id=WP_000210838.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 14422 15129 . - . ID=gene-D5F92_RS01660;Name=D5F92_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01660;old_locus_tag=D5F92_01670 NZ_QYTJ01000008.1 Protein Homology CDS 14422 15129 . - 0 ID=cds-WP_000227144.1;Parent=gene-D5F92_RS01660;Dbxref=GenBank:WP_000227144.1;Name=WP_000227144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227145.1;locus_tag=D5F92_RS01660;product=DUF1003 domain-containing protein;protein_id=WP_000227144.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 15476 17320 . - . ID=gene-D5F92_RS01665;Name=D5F92_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01665;old_locus_tag=D5F92_01675 NZ_QYTJ01000008.1 Protein Homology CDS 15476 17320 . - 0 ID=cds-WP_000032994.1;Parent=gene-D5F92_RS01665;Dbxref=GenBank:WP_000032994.1;Name=WP_000032994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032994.1;locus_tag=D5F92_RS01665;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_000032994.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 17365 19602 . - . ID=gene-D5F92_RS01670;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=D5F92_RS01670;old_locus_tag=D5F92_01680 NZ_QYTJ01000008.1 Protein Homology CDS 17365 19602 . - 0 ID=cds-WP_000241559.1;Parent=gene-D5F92_RS01670;Dbxref=GenBank:WP_000241559.1;Name=WP_000241559.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019806054.1;locus_tag=D5F92_RS01670;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000241559.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 19972 20295 . - . ID=gene-D5F92_RS01675;Name=D5F92_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01675;old_locus_tag=D5F92_01685 NZ_QYTJ01000008.1 Protein Homology CDS 19972 20295 . - 0 ID=cds-WP_000610952.1;Parent=gene-D5F92_RS01675;Dbxref=GenBank:WP_000610952.1;Name=WP_000610952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610952.1;locus_tag=D5F92_RS01675;product=AzlD domain-containing protein;protein_id=WP_000610952.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 20285 20977 . - . ID=gene-D5F92_RS01680;Name=D5F92_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01680;old_locus_tag=D5F92_01690 NZ_QYTJ01000008.1 Protein Homology CDS 20285 20977 . - 0 ID=cds-WP_124785414.1;Parent=gene-D5F92_RS01680;Dbxref=GenBank:WP_124785414.1;Name=WP_124785414.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410672.1;locus_tag=D5F92_RS01680;product=AzlC family ABC transporter permease;protein_id=WP_124785414.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 21300 26015 . + . ID=gene-D5F92_RS01690;Name=D5F92_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01690;old_locus_tag=D5F92_01700 NZ_QYTJ01000008.1 Protein Homology CDS 21300 26015 . + 0 ID=cds-WP_086163522.1;Parent=gene-D5F92_RS01690;Dbxref=GenBank:WP_086163522.1;Name=WP_086163522.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645139.1;locus_tag=D5F92_RS01690;product=S8 family serine peptidase;protein_id=WP_086163522.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 26248 26934 . + . ID=gene-D5F92_RS01695;Name=D5F92_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01695;old_locus_tag=D5F92_01705 NZ_QYTJ01000008.1 Protein Homology CDS 26248 26934 . + 0 ID=cds-WP_000161338.1;Parent=gene-D5F92_RS01695;Dbxref=GenBank:WP_000161338.1;Name=WP_000161338.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161341.1;locus_tag=D5F92_RS01695;product=response regulator transcription factor;protein_id=WP_000161338.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 26931 28319 . + . ID=gene-D5F92_RS01700;Name=D5F92_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01700;old_locus_tag=D5F92_01710 NZ_QYTJ01000008.1 Protein Homology CDS 26931 28319 . + 0 ID=cds-WP_000730416.1;Parent=gene-D5F92_RS01700;Dbxref=GenBank:WP_000730416.1;Name=WP_000730416.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730412.1;locus_tag=D5F92_RS01700;product=sensor histidine kinase;protein_id=WP_000730416.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 28412 29020 . + . ID=gene-D5F92_RS01705;Name=D5F92_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01705;old_locus_tag=D5F92_01715 NZ_QYTJ01000008.1 Protein Homology CDS 28412 29020 . + 0 ID=cds-WP_124749332.1;Parent=gene-D5F92_RS01705;Dbxref=GenBank:WP_124749332.1;Name=WP_124749332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000903267.1;locus_tag=D5F92_RS01705;product=chromosome assembly protein;protein_id=WP_124749332.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 29110 31611 . - . ID=gene-D5F92_RS01710;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=D5F92_RS01710;old_locus_tag=D5F92_01720 NZ_QYTJ01000008.1 Protein Homology CDS 29110 31611 . - 0 ID=cds-WP_086163523.1;Parent=gene-D5F92_RS01710;Dbxref=GenBank:WP_086163523.1;Name=WP_086163523.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639013.1;locus_tag=D5F92_RS01710;product=leucine--tRNA ligase;protein_id=WP_086163523.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 31988 33235 . + . ID=gene-D5F92_RS01715;Name=D5F92_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01715;old_locus_tag=D5F92_01725 NZ_QYTJ01000008.1 Protein Homology CDS 31988 33235 . + 0 ID=cds-WP_000074728.1;Parent=gene-D5F92_RS01715;Dbxref=GenBank:WP_000074728.1;Name=WP_000074728.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481321.1;locus_tag=D5F92_RS01715;product=MFS transporter;protein_id=WP_000074728.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 33278 34123 . - . ID=gene-D5F92_RS01720;Name=D5F92_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01720;old_locus_tag=D5F92_01730 NZ_QYTJ01000008.1 Protein Homology CDS 33278 34123 . - 0 ID=cds-WP_016503332.1;Parent=gene-D5F92_RS01720;Dbxref=GenBank:WP_016503332.1;Name=WP_016503332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953624.1;locus_tag=D5F92_RS01720;product=patatin-like phospholipase family protein;protein_id=WP_016503332.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 34261 34800 . - . ID=gene-D5F92_RS01725;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=D5F92_RS01725;old_locus_tag=D5F92_01735 NZ_QYTJ01000008.1 Protein Homology CDS 34261 34800 . - 0 ID=cds-WP_000887149.1;Parent=gene-D5F92_RS01725;Dbxref=GenBank:WP_000887149.1;Name=WP_000887149.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887149.1;locus_tag=D5F92_RS01725;product=transcription termination/antitermination protein NusG;protein_id=WP_000887149.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq pseudogene 35006 37527 . - . ID=gene-D5F92_RS11550;Name=D5F92_RS11550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS11550;old_locus_tag=D5F92_01740;pseudo=true NZ_QYTJ01000008.1 Protein Homology CDS 35006 37527 . - 0 ID=cds-D5F92_RS11550;Parent=gene-D5F92_RS11550;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063272.1;locus_tag=D5F92_RS11550;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 37839 38012 . - . ID=gene-D5F92_RS01735;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=D5F92_RS01735;old_locus_tag=D5F92_01745 NZ_QYTJ01000008.1 Protein Homology CDS 37839 38012 . - 0 ID=cds-WP_000497678.1;Parent=gene-D5F92_RS01735;Dbxref=GenBank:WP_000497678.1;Name=WP_000497678.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497677.1;locus_tag=D5F92_RS01735;product=preprotein translocase subunit SecE;protein_id=WP_000497678.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 38048 38200 . - . ID=gene-D5F92_RS01740;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F92_RS01740;old_locus_tag=D5F92_01750 NZ_QYTJ01000008.1 Protein Homology CDS 38048 38200 . - 0 ID=cds-WP_000057521.1;Parent=gene-D5F92_RS01740;Dbxref=GenBank:WP_000057521.1;Name=WP_000057521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912025.1;locus_tag=D5F92_RS01740;product=50S ribosomal protein L33;protein_id=WP_000057521.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 38249 40570 . - . ID=gene-D5F92_RS01745;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=D5F92_RS01745;old_locus_tag=D5F92_01755 NZ_QYTJ01000008.1 Protein Homology CDS 38249 40570 . - 0 ID=cds-WP_000764814.1;Parent=gene-D5F92_RS01745;Dbxref=GenBank:WP_000764814.1;Name=WP_000764814.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764805.1;locus_tag=D5F92_RS01745;product=penicillin-binding protein PBP2A;protein_id=WP_000764814.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 40614 41498 . + . ID=gene-D5F92_RS01750;Name=D5F92_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01750;old_locus_tag=D5F92_01760 NZ_QYTJ01000008.1 Protein Homology CDS 40614 41498 . + 0 ID=cds-WP_000010477.1;Parent=gene-D5F92_RS01750;Dbxref=GenBank:WP_000010477.1;Name=WP_000010477.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645974.1;locus_tag=D5F92_RS01750;product=RluA family pseudouridine synthase;protein_id=WP_000010477.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 41523 43163 . - . ID=gene-D5F92_RS01755;Name=D5F92_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01755;old_locus_tag=D5F92_01765 NZ_QYTJ01000008.1 Protein Homology CDS 41523 43163 . - 0 ID=cds-WP_000459240.1;Parent=gene-D5F92_RS01755;Dbxref=GenBank:WP_000459240.1;Name=WP_000459240.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459235.1;locus_tag=D5F92_RS01755;product=zinc ribbon domain-containing protein;protein_id=WP_000459240.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 43333 44544 . - . ID=gene-D5F92_RS01760;Name=D5F92_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01760;old_locus_tag=D5F92_01770 NZ_QYTJ01000008.1 Protein Homology CDS 43333 44544 . - 0 ID=cds-WP_000077191.1;Parent=gene-D5F92_RS01760;Dbxref=GenBank:WP_000077191.1;Name=WP_000077191.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739798.1;locus_tag=D5F92_RS01760;product=phosphopentomutase;protein_id=WP_000077191.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 44611 45282 . - . ID=gene-D5F92_RS01765;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=D5F92_RS01765;old_locus_tag=D5F92_01775 NZ_QYTJ01000008.1 Protein Homology CDS 44611 45282 . - 0 ID=cds-WP_000453154.1;Parent=gene-D5F92_RS01765;Dbxref=GenBank:WP_000453154.1;Name=WP_000453154.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453153.1;locus_tag=D5F92_RS01765;product=deoxyribose-phosphate aldolase;protein_id=WP_000453154.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 45312 46514 . - . ID=gene-D5F92_RS01770;Name=D5F92_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01770;old_locus_tag=D5F92_01780 NZ_QYTJ01000008.1 Protein Homology CDS 45312 46514 . - 0 ID=cds-WP_001159688.1;Parent=gene-D5F92_RS01770;Dbxref=GenBank:WP_001159688.1;Name=WP_001159688.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058832.1;locus_tag=D5F92_RS01770;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_001159688.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 46535 47314 . - . ID=gene-D5F92_RS01775;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=D5F92_RS01775;old_locus_tag=D5F92_01785 NZ_QYTJ01000008.1 Protein Homology CDS 46535 47314 . - 0 ID=cds-WP_001182060.1;Parent=gene-D5F92_RS01775;Dbxref=GenBank:WP_001182060.1;Name=WP_001182060.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=udp;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184939.1;locus_tag=D5F92_RS01775;product=uridine phosphorylase;protein_id=WP_001182060.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 47473 48210 . + . ID=gene-D5F92_RS01780;Name=D5F92_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01780;old_locus_tag=D5F92_01790 NZ_QYTJ01000008.1 Protein Homology CDS 47473 48210 . + 0 ID=cds-WP_001125582.1;Parent=gene-D5F92_RS01780;Dbxref=GenBank:WP_001125582.1;Name=WP_001125582.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644031.1;locus_tag=D5F92_RS01780;product=GntR family transcriptional regulator;protein_id=WP_001125582.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 48223 48585 . + . ID=gene-D5F92_RS01785;Name=D5F92_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01785;old_locus_tag=D5F92_01795 NZ_QYTJ01000008.1 Protein Homology CDS 48223 48585 . + 0 ID=cds-WP_001181223.1;Parent=gene-D5F92_RS01785;Dbxref=GenBank:WP_001181223.1;Name=WP_001181223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181232.1;locus_tag=D5F92_RS01785;product=hypothetical protein;protein_id=WP_001181223.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 48620 50242 . - . ID=gene-D5F92_RS01790;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D5F92_RS01790;old_locus_tag=D5F92_01800 NZ_QYTJ01000008.1 Protein Homology CDS 48620 50242 . - 0 ID=cds-WP_124749333.1;Parent=gene-D5F92_RS01790;Dbxref=GenBank:WP_124749333.1;Name=WP_124749333.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029975.1;locus_tag=D5F92_RS01790;product=chaperonin GroEL;protein_id=WP_124749333.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 50338 50622 . - . ID=gene-D5F92_RS01795;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=D5F92_RS01795;old_locus_tag=D5F92_01805 NZ_QYTJ01000008.1 Protein Homology CDS 50338 50622 . - 0 ID=cds-WP_000917302.1;Parent=gene-D5F92_RS01795;Dbxref=GenBank:WP_000917302.1;Name=WP_000917302.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645309.1;locus_tag=D5F92_RS01795;product=co-chaperone GroES;protein_id=WP_000917302.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 50797 51600 . - . ID=gene-D5F92_RS01800;Name=D5F92_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01800;old_locus_tag=D5F92_01810 NZ_QYTJ01000008.1 Protein Homology CDS 50797 51600 . - 0 ID=cds-WP_000054435.1;Parent=gene-D5F92_RS01800;Dbxref=GenBank:WP_000054435.1;Name=WP_000054435.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054433.1;locus_tag=D5F92_RS01800;product=ABC transporter ATP-binding protein;protein_id=WP_000054435.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 51605 52501 . - . ID=gene-D5F92_RS11365;Name=D5F92_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11365 NZ_QYTJ01000008.1 Protein Homology CDS 51605 52501 . - 0 ID=cds-WP_000884162.1;Parent=gene-D5F92_RS11365;Dbxref=GenBank:WP_000884162.1;Name=WP_000884162.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884158.1;locus_tag=D5F92_RS11365;product=ABC transporter permease;protein_id=WP_000884162.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 52517 53479 . - . ID=gene-D5F92_RS11370;Name=D5F92_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11370 NZ_QYTJ01000008.1 Protein Homology CDS 52517 53479 . - 0 ID=cds-WP_000724423.1;Parent=gene-D5F92_RS11370;Dbxref=GenBank:WP_000724423.1;Name=WP_000724423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058834.1;locus_tag=D5F92_RS11370;product=ABC transporter substrate-binding protein;protein_id=WP_000724423.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 53944 54741 . - . ID=gene-D5F92_RS01810;Name=D5F92_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01810;old_locus_tag=D5F92_01820 NZ_QYTJ01000008.1 Protein Homology CDS 53944 54741 . - 0 ID=cds-WP_016503337.1;Parent=gene-D5F92_RS01810;Dbxref=GenBank:WP_016503337.1;Name=WP_016503337.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251911.1;locus_tag=D5F92_RS01810;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016503337.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 54927 55787 . + . ID=gene-D5F92_RS01815;Name=D5F92_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01815;old_locus_tag=D5F92_01825 NZ_QYTJ01000008.1 Protein Homology CDS 54927 55787 . + 0 ID=cds-WP_016503338.1;Parent=gene-D5F92_RS01815;Dbxref=GenBank:WP_016503338.1;Name=WP_016503338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767712.1;locus_tag=D5F92_RS01815;product=VOC family protein;protein_id=WP_016503338.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq gene 55830 56561 . + . ID=gene-D5F92_RS01820;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D5F92_RS01820;old_locus_tag=D5F92_01830 NZ_QYTJ01000008.1 Protein Homology CDS 55830 56561 . + 0 ID=cds-WP_086163527.1;Parent=gene-D5F92_RS01820;Dbxref=GenBank:WP_086163527.1;Name=WP_086163527.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632340.1;locus_tag=D5F92_RS01820;product=peroxide stress protein YaaA;protein_id=WP_086163527.1;transl_table=11 NZ_QYTJ01000008.1 RefSeq pseudogene 56918 57067 . - . ID=gene-D5F92_RS01825;Name=D5F92_RS01825;end_range=57067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS01825;old_locus_tag=D5F92_01835;partial=true;pseudo=true NZ_QYTJ01000008.1 Protein Homology CDS 56918 57067 . - 0 ID=cds-D5F92_RS01825;Parent=gene-D5F92_RS01825;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=57067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287938.1;locus_tag=D5F92_RS01825;partial=true;product=radical SAM protein;pseudo=true;transl_table=11 ##sequence-region NZ_QYTJ01000080.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000080.1 RefSeq region 1 807 . + . ID=NZ_QYTJ01000080.1:1..807;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000080.1 RefSeq gene 1 417 . - . ID=gene-D5F92_RS11250;Name=D5F92_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11250;old_locus_tag=D5F92_11265;partial=true;start_range=.,1 NZ_QYTJ01000080.1 Protein Homology CDS 1 417 . - 0 ID=cds-WP_260426625.1;Parent=gene-D5F92_RS11250;Dbxref=GenBank:WP_260426625.1;Name=WP_260426625.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611914.1;locus_tag=D5F92_RS11250;partial=true;product=IS3 family transposase;protein_id=WP_260426625.1;start_range=.,1;transl_table=11 NZ_QYTJ01000080.1 RefSeq gene 428 807 . - . ID=gene-D5F92_RS11255;Name=D5F92_RS11255;end_range=807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11255;old_locus_tag=D5F92_11270;partial=true NZ_QYTJ01000080.1 Protein Homology CDS 428 807 . - 2 ID=cds-WP_142996904.1;Parent=gene-D5F92_RS11255;Dbxref=GenBank:WP_142996904.1;Name=WP_142996904.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=807,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F92_RS11255;partial=true;product=integrase core domain-containing protein;protein_id=WP_142996904.1;transl_table=11 ##sequence-region NZ_QYTJ01000081.1 1 727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000081.1 RefSeq region 1 727 . + . ID=NZ_QYTJ01000081.1:1..727;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000081.1 RefSeq gene 116 709 . + . ID=gene-D5F92_RS11260;Name=D5F92_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS11260;old_locus_tag=D5F92_11275 NZ_QYTJ01000081.1 GeneMarkS-2+ CDS 116 709 . + 0 ID=cds-WP_124785549.1;Parent=gene-D5F92_RS11260;Dbxref=GenBank:WP_124785549.1;Name=WP_124785549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F92_RS11260;product=collagen-like protein;protein_id=WP_124785549.1;transl_table=11 ##sequence-region NZ_QYTJ01000009.1 1 45815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTJ01000009.1 RefSeq region 1 45815 . + . ID=NZ_QYTJ01000009.1:1..45815;Dbxref=taxon:1311;collected-by=ILRI;collection-date=1999;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI125 NZ_QYTJ01000009.1 RefSeq gene 1 449 . + . ID=gene-D5F92_RS01830;Name=D5F92_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01830;old_locus_tag=D5F92_01840;partial=true;start_range=.,1 NZ_QYTJ01000009.1 Protein Homology CDS 1 449 . + 2 ID=cds-WP_124785416.1;Parent=gene-D5F92_RS01830;Dbxref=GenBank:WP_124785416.1;Name=WP_124785416.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F92_RS01830;partial=true;product=integrase core domain-containing protein;protein_id=WP_124785416.1;start_range=.,1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 507 3158 . - . ID=gene-D5F92_RS01835;Name=D5F92_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01835;old_locus_tag=D5F92_01845 NZ_QYTJ01000009.1 Protein Homology CDS 507 3158 . - 0 ID=cds-WP_016502585.1;Parent=gene-D5F92_RS01835;Dbxref=GenBank:WP_016502585.1;Name=WP_016502585.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014623308.1;locus_tag=D5F92_RS01835;product=valine--tRNA ligase;protein_id=WP_016502585.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 3180 3872 . - . ID=gene-D5F92_RS01840;Name=D5F92_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01840;old_locus_tag=D5F92_01850 NZ_QYTJ01000009.1 Protein Homology CDS 3180 3872 . - 0 ID=cds-WP_000997618.1;Parent=gene-D5F92_RS01840;Dbxref=GenBank:WP_000997618.1;Name=WP_000997618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648404.1;locus_tag=D5F92_RS01840;product=hypothetical protein;protein_id=WP_000997618.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 3869 4447 . - . ID=gene-D5F92_RS01845;Name=D5F92_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01845;old_locus_tag=D5F92_01855 NZ_QYTJ01000009.1 Protein Homology CDS 3869 4447 . - 0 ID=cds-WP_086163244.1;Parent=gene-D5F92_RS01845;Dbxref=GenBank:WP_086163244.1;Name=WP_086163244.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166188.1;locus_tag=D5F92_RS01845;product=GNAT family N-acetyltransferase;protein_id=WP_086163244.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 4716 5027 . - . ID=gene-D5F92_RS01850;Name=D5F92_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01850;old_locus_tag=D5F92_01860 NZ_QYTJ01000009.1 Protein Homology CDS 4716 5027 . - 0 ID=cds-WP_016502583.1;Parent=gene-D5F92_RS01850;Dbxref=GenBank:WP_016502583.1;Name=WP_016502583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001119099.1;locus_tag=D5F92_RS01850;product=hypothetical protein;protein_id=WP_016502583.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 5136 5390 . - . ID=gene-D5F92_RS01855;Name=D5F92_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01855;old_locus_tag=D5F92_01865 NZ_QYTJ01000009.1 Protein Homology CDS 5136 5390 . - 0 ID=cds-WP_000119699.1;Parent=gene-D5F92_RS01855;Dbxref=GenBank:WP_000119699.1;Name=WP_000119699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771609.1;locus_tag=D5F92_RS01855;product=DUF1912 family protein;protein_id=WP_000119699.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 5581 6582 . - . ID=gene-D5F92_RS01860;Name=D5F92_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01860;old_locus_tag=D5F92_01870 NZ_QYTJ01000009.1 Protein Homology CDS 5581 6582 . - 0 ID=cds-WP_016502582.1;Parent=gene-D5F92_RS01860;Dbxref=GenBank:WP_016502582.1;Name=WP_016502582.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648405.1;locus_tag=D5F92_RS01860;product=aldose epimerase family protein;protein_id=WP_016502582.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 6708 7703 . - . ID=gene-D5F92_RS01865;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D5F92_RS01865;old_locus_tag=D5F92_01875 NZ_QYTJ01000009.1 Protein Homology CDS 6708 7703 . - 0 ID=cds-WP_016502581.1;Parent=gene-D5F92_RS01865;Dbxref=GenBank:WP_016502581.1;Name=WP_016502581.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996515.1;locus_tag=D5F92_RS01865;product=UDP-glucose 4-epimerase GalE;protein_id=WP_016502581.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 7705 9189 . - . ID=gene-D5F92_RS01870;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=D5F92_RS01870;old_locus_tag=D5F92_01880 NZ_QYTJ01000009.1 Protein Homology CDS 7705 9189 . - 0 ID=cds-WP_016502580.1;Parent=gene-D5F92_RS01870;Dbxref=GenBank:WP_016502580.1;Name=WP_016502580.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058395.1;locus_tag=D5F92_RS01870;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_016502580.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 9199 10371 . - . ID=gene-D5F92_RS01875;Name=D5F92_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01875;old_locus_tag=D5F92_01885 NZ_QYTJ01000009.1 Protein Homology CDS 9199 10371 . - 0 ID=cds-WP_016502579.1;Parent=gene-D5F92_RS01875;Dbxref=GenBank:WP_016502579.1;Name=WP_016502579.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018369289.1;locus_tag=D5F92_RS01875;product=galactokinase;protein_id=WP_016502579.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 10461 12662 . - . ID=gene-D5F92_RS01880;Name=D5F92_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01880;old_locus_tag=D5F92_01890 NZ_QYTJ01000009.1 Protein Homology CDS 10461 12662 . - 0 ID=cds-WP_001122132.1;Parent=gene-D5F92_RS01880;Dbxref=GenBank:WP_001122132.1;Name=WP_001122132.1;Ontology_term=GO:0000272,GO:0004557,GO:0046872,GO:0070403;gbkey=CDS;go_function=alpha-galactosidase activity|0004557||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122135.1;locus_tag=D5F92_RS01880;product=alpha-galactosidase;protein_id=WP_001122132.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 12672 13505 . - . ID=gene-D5F92_RS01885;Name=D5F92_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01885;old_locus_tag=D5F92_01895 NZ_QYTJ01000009.1 Protein Homology CDS 12672 13505 . - 0 ID=cds-WP_000278569.1;Parent=gene-D5F92_RS01885;Dbxref=GenBank:WP_000278569.1;Name=WP_000278569.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278569.1;locus_tag=D5F92_RS01885;product=carbohydrate ABC transporter permease;protein_id=WP_000278569.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 13518 14408 . - . ID=gene-D5F92_RS01890;Name=D5F92_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01890;old_locus_tag=D5F92_01900 NZ_QYTJ01000009.1 Protein Homology CDS 13518 14408 . - 0 ID=cds-WP_000791281.1;Parent=gene-D5F92_RS01890;Dbxref=GenBank:WP_000791281.1;Name=WP_000791281.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648409.1;locus_tag=D5F92_RS01890;product=carbohydrate ABC transporter permease;protein_id=WP_000791281.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 14492 15769 . - . ID=gene-D5F92_RS01895;Name=D5F92_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01895;old_locus_tag=D5F92_01905 NZ_QYTJ01000009.1 Protein Homology CDS 14492 15769 . - 0 ID=cds-WP_016502578.1;Parent=gene-D5F92_RS01895;Dbxref=GenBank:WP_016502578.1;Name=WP_016502578.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738089.1;locus_tag=D5F92_RS01895;product=ABC transporter substrate-binding protein;protein_id=WP_016502578.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 16008 16838 . + . ID=gene-D5F92_RS01900;Name=D5F92_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01900;old_locus_tag=D5F92_01910 NZ_QYTJ01000009.1 Protein Homology CDS 16008 16838 . + 0 ID=cds-WP_001015729.1;Parent=gene-D5F92_RS01900;Dbxref=GenBank:WP_001015729.1;Name=WP_001015729.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015730.1;locus_tag=D5F92_RS01900;product=AraC family transcriptional regulator;protein_id=WP_001015729.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 17123 17407 . - . ID=gene-D5F92_RS01905;Name=D5F92_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01905;old_locus_tag=D5F92_01915 NZ_QYTJ01000009.1 Protein Homology CDS 17123 17407 . - 0 ID=cds-WP_000734774.1;Parent=gene-D5F92_RS01905;Dbxref=GenBank:WP_000734774.1;Name=WP_000734774.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734775.1;locus_tag=D5F92_RS01905;product=PTS sugar transporter subunit IIB;protein_id=WP_000734774.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 17409 18740 . - . ID=gene-D5F92_RS01910;Name=D5F92_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01910;old_locus_tag=D5F92_01920 NZ_QYTJ01000009.1 Protein Homology CDS 17409 18740 . - 0 ID=cds-WP_016502577.1;Parent=gene-D5F92_RS01910;Dbxref=GenBank:WP_016502577.1;Name=WP_016502577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884276.1;locus_tag=D5F92_RS01910;product=PTS galactitol transporter subunit IIC;protein_id=WP_016502577.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 18753 19217 . - . ID=gene-D5F92_RS01915;Name=D5F92_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01915;old_locus_tag=D5F92_01925 NZ_QYTJ01000009.1 Protein Homology CDS 18753 19217 . - 0 ID=cds-WP_016480380.1;Parent=gene-D5F92_RS01915;Dbxref=GenBank:WP_016480380.1;Name=WP_016480380.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000888633.1;locus_tag=D5F92_RS01915;product=PTS sugar transporter subunit IIA;protein_id=WP_016480380.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 19352 20182 . - . ID=gene-D5F92_RS01920;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=D5F92_RS01920;old_locus_tag=D5F92_01930 NZ_QYTJ01000009.1 Protein Homology CDS 19352 20182 . - 0 ID=cds-WP_000221976.1;Parent=gene-D5F92_RS01920;Dbxref=GenBank:WP_000221976.1;Name=WP_000221976.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631792.1;locus_tag=D5F92_RS01920;product=rhamnulose-1-phosphate aldolase;protein_id=WP_000221976.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 20205 21542 . - . ID=gene-D5F92_RS01925;Name=D5F92_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01925;old_locus_tag=D5F92_01935 NZ_QYTJ01000009.1 Protein Homology CDS 20205 21542 . - 0 ID=cds-WP_016502576.1;Parent=gene-D5F92_RS01925;Dbxref=GenBank:WP_016502576.1;Name=WP_016502576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648410.1;locus_tag=D5F92_RS01925;product=PTS galactitol transporter subunit IIC;protein_id=WP_016502576.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 21554 21832 . - . ID=gene-D5F92_RS01930;Name=D5F92_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01930;old_locus_tag=D5F92_01940 NZ_QYTJ01000009.1 Protein Homology CDS 21554 21832 . - 0 ID=cds-WP_000734006.1;Parent=gene-D5F92_RS01930;Dbxref=GenBank:WP_000734006.1;Name=WP_000734006.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734008.1;locus_tag=D5F92_RS01930;product=PTS sugar transporter subunit IIB;protein_id=WP_000734006.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 21851 22300 . - . ID=gene-D5F92_RS01935;Name=D5F92_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01935;old_locus_tag=D5F92_01945 NZ_QYTJ01000009.1 Protein Homology CDS 21851 22300 . - 0 ID=cds-WP_041165653.1;Parent=gene-D5F92_RS01935;Dbxref=GenBank:WP_041165653.1;Name=WP_041165653.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570642.1;locus_tag=D5F92_RS01935;product=PTS sugar transporter subunit IIA;protein_id=WP_041165653.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 22415 24484 . - . ID=gene-D5F92_RS01940;Name=D5F92_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01940;old_locus_tag=D5F92_01950 NZ_QYTJ01000009.1 Protein Homology CDS 22415 24484 . - 0 ID=cds-WP_257638779.1;Parent=gene-D5F92_RS01940;Dbxref=GenBank:WP_257638779.1;Name=WP_257638779.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042758.1;locus_tag=D5F92_RS01940;product=BglG family transcription antiterminator;protein_id=WP_257638779.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 24684 25439 . + . ID=gene-D5F92_RS01945;Name=D5F92_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01945;old_locus_tag=D5F92_01955 NZ_QYTJ01000009.1 Protein Homology CDS 24684 25439 . + 0 ID=cds-WP_124749464.1;Parent=gene-D5F92_RS01945;Dbxref=GenBank:WP_124749464.1;Name=WP_124749464.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018433.1;locus_tag=D5F92_RS01945;product=class I SAM-dependent methyltransferase;protein_id=WP_124749464.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 25460 25798 . + . ID=gene-D5F92_RS01950;Name=D5F92_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01950;old_locus_tag=D5F92_01960 NZ_QYTJ01000009.1 Protein Homology CDS 25460 25798 . + 0 ID=cds-WP_000120348.1;Parent=gene-D5F92_RS01950;Dbxref=GenBank:WP_000120348.1;Name=WP_000120348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120348.1;locus_tag=D5F92_RS01950;product=cupin domain-containing protein;protein_id=WP_000120348.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 25800 26105 . + . ID=gene-D5F92_RS01955;Name=D5F92_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01955;old_locus_tag=D5F92_01965 NZ_QYTJ01000009.1 Protein Homology CDS 25800 26105 . + 0 ID=cds-WP_000484318.1;Parent=gene-D5F92_RS01955;Dbxref=GenBank:WP_000484318.1;Name=WP_000484318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484319.1;locus_tag=D5F92_RS01955;product=hypothetical protein;protein_id=WP_000484318.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 26177 26247 . + . ID=gene-D5F92_RS01960;Name=D5F92_RS01960;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F92_RS01960;old_locus_tag=D5F92_01970 NZ_QYTJ01000009.1 tRNAscan-SE tRNA 26177 26247 . + . ID=rna-D5F92_RS01960;Parent=gene-D5F92_RS01960;anticodon=(pos:26209..26211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS01960;product=tRNA-Thr NZ_QYTJ01000009.1 tRNAscan-SE exon 26177 26247 . + . ID=exon-D5F92_RS01960-1;Parent=rna-D5F92_RS01960;anticodon=(pos:26209..26211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F92_RS01960;product=tRNA-Thr NZ_QYTJ01000009.1 RefSeq gene 26348 26569 . - . ID=gene-D5F92_RS01965;Name=D5F92_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01965;old_locus_tag=D5F92_01975 NZ_QYTJ01000009.1 Protein Homology CDS 26348 26569 . - 0 ID=cds-WP_016502572.1;Parent=gene-D5F92_RS01965;Dbxref=GenBank:WP_016502572.1;Name=WP_016502572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186893.1;locus_tag=D5F92_RS01965;product=hypothetical protein;protein_id=WP_016502572.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 27260 27784 . - . ID=gene-D5F92_RS01975;Name=D5F92_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01975;old_locus_tag=D5F92_01985 NZ_QYTJ01000009.1 Protein Homology CDS 27260 27784 . - 0 ID=cds-WP_016502571.1;Parent=gene-D5F92_RS01975;Dbxref=GenBank:WP_016502571.1;Name=WP_016502571.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237805.1;locus_tag=D5F92_RS01975;product=TetR/AcrR family transcriptional regulator;protein_id=WP_016502571.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 27916 28779 . + . ID=gene-D5F92_RS01980;Name=D5F92_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01980;old_locus_tag=D5F92_01990 NZ_QYTJ01000009.1 Protein Homology CDS 27916 28779 . + 0 ID=cds-WP_124749466.1;Parent=gene-D5F92_RS01980;Dbxref=GenBank:WP_124749466.1;Name=WP_124749466.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203281.1;locus_tag=D5F92_RS01980;product=cation diffusion facilitator family transporter;protein_id=WP_124749466.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 28864 29718 . + . ID=gene-D5F92_RS01985;Name=D5F92_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01985;old_locus_tag=D5F92_01995 NZ_QYTJ01000009.1 Protein Homology CDS 28864 29718 . + 0 ID=cds-WP_016502569.1;Parent=gene-D5F92_RS01985;Dbxref=GenBank:WP_016502569.1;Name=WP_016502569.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631788.1;locus_tag=D5F92_RS01985;product=aldo/keto reductase;protein_id=WP_016502569.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 29828 30865 . + . ID=gene-D5F92_RS01990;Name=D5F92_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS01990;old_locus_tag=D5F92_02000 NZ_QYTJ01000009.1 Protein Homology CDS 29828 30865 . + 0 ID=cds-WP_016502568.1;Parent=gene-D5F92_RS01990;Dbxref=GenBank:WP_016502568.1;Name=WP_016502568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861552.1;locus_tag=D5F92_RS01990;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_016502568.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 30881 31270 . + . ID=gene-D5F92_RS01995;Name=nmlR;gbkey=Gene;gene=nmlR;gene_biotype=protein_coding;locus_tag=D5F92_RS01995;old_locus_tag=D5F92_02005 NZ_QYTJ01000009.1 Protein Homology CDS 30881 31270 . + 0 ID=cds-WP_000547676.1;Parent=gene-D5F92_RS01995;Dbxref=GenBank:WP_000547676.1;Name=WP_000547676.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nmlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547677.1;locus_tag=D5F92_RS01995;product=stress response transcriptional regulator NmlR;protein_id=WP_000547676.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 31280 31675 . + . ID=gene-D5F92_RS02000;Name=D5F92_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02000;old_locus_tag=D5F92_02010 NZ_QYTJ01000009.1 Protein Homology CDS 31280 31675 . + 0 ID=cds-WP_016502567.1;Parent=gene-D5F92_RS02000;Dbxref=GenBank:WP_016502567.1;Name=WP_016502567.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158469.1;locus_tag=D5F92_RS02000;product=cupin domain-containing protein;protein_id=WP_016502567.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 31699 32016 . + . ID=gene-D5F92_RS02005;Name=D5F92_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02005;old_locus_tag=D5F92_02015 NZ_QYTJ01000009.1 Protein Homology CDS 31699 32016 . + 0 ID=cds-WP_000660666.1;Parent=gene-D5F92_RS02005;Dbxref=GenBank:WP_000660666.1;Name=WP_000660666.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660666.1;locus_tag=D5F92_RS02005;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000660666.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 32103 32387 . + . ID=gene-D5F92_RS02010;Name=D5F92_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02010;old_locus_tag=D5F92_02020 NZ_QYTJ01000009.1 Protein Homology CDS 32103 32387 . + 0 ID=cds-WP_000955821.1;Parent=gene-D5F92_RS02010;Dbxref=GenBank:WP_000955821.1;Name=WP_000955821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000955821.1;locus_tag=D5F92_RS02010;product=DUF2316 family protein;protein_id=WP_000955821.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq pseudogene 32625 33116 . + . ID=gene-D5F92_RS02015;Name=D5F92_RS02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F92_RS02015;old_locus_tag=D5F92_02025;pseudo=true NZ_QYTJ01000009.1 Protein Homology CDS 32625 33116 . + 0 ID=cds-D5F92_RS02015;Parent=gene-D5F92_RS02015;Note=internal stop;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648418.1;locus_tag=D5F92_RS02015;product=GyrI-like domain-containing protein;pseudo=true;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 33160 33549 . - . ID=gene-D5F92_RS02020;Name=D5F92_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02020;old_locus_tag=D5F92_02030 NZ_QYTJ01000009.1 Protein Homology CDS 33160 33549 . - 0 ID=cds-WP_000632621.1;Parent=gene-D5F92_RS02020;Dbxref=GenBank:WP_000632621.1;Name=WP_000632621.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632624.1;locus_tag=D5F92_RS02020;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000632621.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 33562 36729 . - . ID=gene-D5F92_RS02025;Name=hupY;gbkey=Gene;gene=hupY;gene_biotype=protein_coding;gene_synonym=lrrG;locus_tag=D5F92_RS02025;old_locus_tag=D5F92_02035 NZ_QYTJ01000009.1 Protein Homology CDS 33562 36729 . - 0 ID=cds-WP_016502565.1;Parent=gene-D5F92_RS02025;Dbxref=GenBank:WP_016502565.1;Name=WP_016502565.1;gbkey=CDS;gene=hupY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162177.1;locus_tag=D5F92_RS02025;product=leucine-rich repeat adhesin HupY/LrrG;protein_id=WP_016502565.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 36792 38960 . - . ID=gene-D5F92_RS02030;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D5F92_RS02030;old_locus_tag=D5F92_02040 NZ_QYTJ01000009.1 Protein Homology CDS 36792 38960 . - 0 ID=cds-WP_000194376.1;Parent=gene-D5F92_RS02030;Dbxref=GenBank:WP_000194376.1;Name=WP_000194376.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058380.1;locus_tag=D5F92_RS02030;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000194376.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 38962 39375 . - . ID=gene-D5F92_RS02035;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D5F92_RS02035;old_locus_tag=D5F92_02045 NZ_QYTJ01000009.1 Protein Homology CDS 38962 39375 . - 0 ID=cds-WP_000378632.1;Parent=gene-D5F92_RS02035;Dbxref=GenBank:WP_000378632.1;Name=WP_000378632.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767518.1;locus_tag=D5F92_RS02035;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000378632.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 39376 40386 . - . ID=gene-D5F92_RS02040;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D5F92_RS02040;old_locus_tag=D5F92_02050 NZ_QYTJ01000009.1 Protein Homology CDS 39376 40386 . - 0 ID=cds-WP_001192437.1;Parent=gene-D5F92_RS02040;Dbxref=GenBank:WP_001192437.1;Name=WP_001192437.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192438.1;locus_tag=D5F92_RS02040;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_001192437.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 40941 41849 . - . ID=gene-D5F92_RS02045;Name=D5F92_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02045;old_locus_tag=D5F92_02055 NZ_QYTJ01000009.1 Protein Homology CDS 40941 41849 . - 0 ID=cds-WP_000848920.1;Parent=gene-D5F92_RS02045;Dbxref=GenBank:WP_000848920.1;Name=WP_000848920.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848915.1;locus_tag=D5F92_RS02045;product=glycosyltransferase family 2 protein;protein_id=WP_000848920.1;transl_table=11 NZ_QYTJ01000009.1 RefSeq gene 42059 45760 . - . ID=gene-D5F92_RS02050;Name=D5F92_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F92_RS02050;old_locus_tag=D5F92_02060 NZ_QYTJ01000009.1 Protein Homology CDS 42059 45760 . - 0 ID=cds-WP_124749468.1;Parent=gene-D5F92_RS02050;Dbxref=GenBank:WP_124749468.1;Name=WP_124749468.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646417.1;locus_tag=D5F92_RS02050;product=S8 family serine peptidase;protein_id=WP_124749468.1;transl_table=11 ###