##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM385972v1 #!genome-build-accession NCBI_Assembly:GCF_003859725.1 #!annotation-date 09/27/2025 09:53:32 #!annotation-source NCBI RefSeq GCF_003859725.1-RS_2025_09_27 ##sequence-region NZ_QYTD01000001.1 1 285932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000001.1 RefSeq region 1 285932 . + . ID=NZ_QYTD01000001.1:1..285932;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000001.1 RefSeq gene 148 1253 . + . ID=gene-D5F94_RS00005;Name=D5F94_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00005;old_locus_tag=D5F94_00005 NZ_QYTD01000001.1 Protein Homology CDS 148 424 . + 0 ID=cds-WP_124749317.1;Parent=gene-D5F94_RS00005;Dbxref=GenBank:WP_124749317.1;Name=WP_124749317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F94_RS00005;product=IS3 family transposase;protein_id=WP_124749317.1;transl_table=11 NZ_QYTD01000001.1 Protein Homology CDS 424 1253 . + 2 ID=cds-WP_124749317.1;Parent=gene-D5F94_RS00005;Dbxref=GenBank:WP_124749317.1;Name=WP_124749317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611996.1;locus_tag=D5F94_RS00005;product=IS3 family transposase;protein_id=WP_124749317.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 1295 1456 . + . ID=gene-D5F94_RS10585;Name=D5F94_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10585;old_locus_tag=D5F94_00010;partial=true;pseudo=true;start_range=.,1295 NZ_QYTD01000001.1 Protein Homology CDS 1295 1456 . + 0 ID=cds-D5F94_RS10585;Parent=gene-D5F94_RS10585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480259.1;locus_tag=D5F94_RS10585;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,1295;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 1596 1868 . + . ID=gene-D5F94_RS00015;Name=D5F94_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00015;old_locus_tag=D5F94_00015 NZ_QYTD01000001.1 Protein Homology CDS 1596 1868 . + 0 ID=cds-WP_016480258.1;Parent=gene-D5F94_RS00015;Dbxref=GenBank:WP_016480258.1;Name=WP_016480258.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889645.1;locus_tag=D5F94_RS00015;product=helix-turn-helix domain-containing protein;protein_id=WP_016480258.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 1878 3099 . + . ID=gene-D5F94_RS00020;Name=D5F94_RS00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00020;old_locus_tag=D5F94_00020;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 1878 3099 . + 0 ID=cds-D5F94_RS00020;Parent=gene-D5F94_RS00020;Note=frameshifted;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480257.1;locus_tag=D5F94_RS00020;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 3206 3598 . - . ID=gene-D5F94_RS00025;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=D5F94_RS00025;old_locus_tag=D5F94_00025 NZ_QYTD01000001.1 Protein Homology CDS 3206 3598 . - 0 ID=cds-WP_000035940.1;Parent=gene-D5F94_RS00025;Dbxref=GenBank:WP_000035940.1;Name=WP_000035940.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=D5F94_RS00025;product=30S ribosomal protein S9;protein_id=WP_000035940.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 3619 4065 . - . ID=gene-D5F94_RS00030;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=D5F94_RS00030;old_locus_tag=D5F94_00030 NZ_QYTD01000001.1 Protein Homology CDS 3619 4065 . - 0 ID=cds-WP_016480256.1;Parent=gene-D5F94_RS00030;Dbxref=GenBank:WP_016480256.1;Name=WP_016480256.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=D5F94_RS00030;product=50S ribosomal protein L13;protein_id=WP_016480256.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 4290 4409 . - . ID=gene-D5F94_RS00035;Name=D5F94_RS00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00035;old_locus_tag=D5F94_00035;partial=true;pseudo=true;start_range=.,4290 NZ_QYTD01000001.1 Protein Homology CDS 4290 4409 . - 0 ID=cds-D5F94_RS00035;Parent=gene-D5F94_RS00035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002278327.1;locus_tag=D5F94_RS00035;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,4290;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 4947 5807 . - . ID=gene-D5F94_RS00045;Name=D5F94_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00045;old_locus_tag=D5F94_00045 NZ_QYTD01000001.1 Protein Homology CDS 4947 5807 . - 0 ID=cds-WP_000143135.1;Parent=gene-D5F94_RS00045;Dbxref=GenBank:WP_000143135.1;Name=WP_000143135.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771178.1;locus_tag=D5F94_RS00045;product=DegV family protein;protein_id=WP_000143135.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 5901 6419 . - . ID=gene-D5F94_RS00050;Name=D5F94_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00050;old_locus_tag=D5F94_00050 NZ_QYTD01000001.1 Protein Homology CDS 5901 6419 . - 0 ID=cds-WP_000716636.1;Parent=gene-D5F94_RS00050;Dbxref=GenBank:WP_000716636.1;Name=WP_000716636.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716639.1;locus_tag=D5F94_RS00050;product=NYN domain-containing protein;protein_id=WP_000716636.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 6416 7171 . - . ID=gene-D5F94_RS00055;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=D5F94_RS00055;old_locus_tag=D5F94_00055 NZ_QYTD01000001.1 Protein Homology CDS 6416 7171 . - 0 ID=cds-WP_000178025.1;Parent=gene-D5F94_RS00055;Dbxref=GenBank:WP_000178025.1;Name=WP_000178025.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178020.1;locus_tag=D5F94_RS00055;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_000178025.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 7274 7660 . - . ID=gene-D5F94_RS00060;Name=D5F94_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00060;old_locus_tag=D5F94_00060 NZ_QYTD01000001.1 Protein Homology CDS 7274 7660 . - 0 ID=cds-WP_000568031.1;Parent=gene-D5F94_RS00060;Dbxref=GenBank:WP_000568031.1;Name=WP_000568031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568031.1;locus_tag=D5F94_RS00060;product=Mini-ribonuclease 3;protein_id=WP_000568031.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 7653 8996 . - . ID=gene-D5F94_RS00065;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=D5F94_RS00065;old_locus_tag=D5F94_00065 NZ_QYTD01000001.1 Protein Homology CDS 7653 8996 . - 0 ID=cds-WP_016480253.1;Parent=gene-D5F94_RS00065;Dbxref=GenBank:WP_016480253.1;Name=WP_016480253.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591125.1;locus_tag=D5F94_RS00065;product=cysteine--tRNA ligase;protein_id=WP_016480253.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 8993 9175 . - . ID=gene-D5F94_RS00070;Name=D5F94_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00070;old_locus_tag=D5F94_00070 NZ_QYTD01000001.1 Protein Homology CDS 8993 9175 . - 0 ID=cds-WP_000656477.1;Parent=gene-D5F94_RS00070;Dbxref=GenBank:WP_000656477.1;Name=WP_000656477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656477.1;locus_tag=D5F94_RS00070;product=hypothetical protein;protein_id=WP_000656477.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 9185 9769 . - . ID=gene-D5F94_RS00075;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=D5F94_RS00075;old_locus_tag=D5F94_00075 NZ_QYTD01000001.1 Protein Homology CDS 9185 9769 . - 0 ID=cds-WP_000539954.1;Parent=gene-D5F94_RS00075;Dbxref=GenBank:WP_000539954.1;Name=WP_000539954.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539954.1;locus_tag=D5F94_RS00075;product=serine O-acetyltransferase;protein_id=WP_000539954.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 9778 10530 . - . ID=gene-D5F94_RS00080;Name=D5F94_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00080;old_locus_tag=D5F94_00080 NZ_QYTD01000001.1 Protein Homology CDS 9778 10530 . - 0 ID=cds-WP_124749318.1;Parent=gene-D5F94_RS00080;Dbxref=GenBank:WP_124749318.1;Name=WP_124749318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480252.1;locus_tag=D5F94_RS00080;product=SseB family protein;protein_id=WP_124749318.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 10532 12661 . - . ID=gene-D5F94_RS00085;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=D5F94_RS00085;old_locus_tag=D5F94_00085 NZ_QYTD01000001.1 Protein Homology CDS 10532 12661 . - 0 ID=cds-WP_124749319.1;Parent=gene-D5F94_RS00085;Dbxref=GenBank:WP_124749319.1;Name=WP_124749319.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480251.1;locus_tag=D5F94_RS00085;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_124749319.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 13042 13311 . - . ID=gene-D5F94_RS00090;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=D5F94_RS00090;old_locus_tag=D5F94_00090 NZ_QYTD01000001.1 Protein Homology CDS 13042 13311 . - 0 ID=cds-WP_001018249.1;Parent=gene-D5F94_RS00090;Dbxref=GenBank:WP_001018249.1;Name=WP_001018249.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=D5F94_RS00090;product=30S ribosomal protein S15;protein_id=WP_001018249.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 13399 14658 . - . ID=gene-D5F94_RS00095;Name=D5F94_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00095;old_locus_tag=D5F94_00095 NZ_QYTD01000001.1 Protein Homology CDS 13399 14658 . - 0 ID=cds-WP_124749320.1;Parent=gene-D5F94_RS00095;Dbxref=GenBank:WP_124749320.1;Name=WP_124749320.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203075.1;locus_tag=D5F94_RS00095;product=ferredoxin reductase family protein;protein_id=WP_124749320.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 14767 15696 . - . ID=gene-D5F94_RS00100;Name=D5F94_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00100;old_locus_tag=D5F94_00100 NZ_QYTD01000001.1 Protein Homology CDS 14767 15696 . - 0 ID=cds-WP_016480249.1;Parent=gene-D5F94_RS00100;Dbxref=GenBank:WP_016480249.1;Name=WP_016480249.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203818.1;locus_tag=D5F94_RS00100;product=transketolase family protein;protein_id=WP_016480249.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 15693 16550 . - . ID=gene-D5F94_RS00105;Name=D5F94_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00105;old_locus_tag=D5F94_00105 NZ_QYTD01000001.1 Protein Homology CDS 15693 16550 . - 0 ID=cds-WP_124749321.1;Parent=gene-D5F94_RS00105;Dbxref=GenBank:WP_124749321.1;Name=WP_124749321.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648167.1;locus_tag=D5F94_RS00105;product=transketolase;protein_id=WP_124749321.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 16553 17908 . - . ID=gene-D5F94_RS00110;Name=D5F94_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00110;old_locus_tag=D5F94_00110 NZ_QYTD01000001.1 Protein Homology CDS 16553 17908 . - 0 ID=cds-WP_000677351.1;Parent=gene-D5F94_RS00110;Dbxref=GenBank:WP_000677351.1;Name=WP_000677351.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646152.1;locus_tag=D5F94_RS00110;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000677351.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 17921 18205 . - . ID=gene-D5F94_RS00115;Name=D5F94_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00115;old_locus_tag=D5F94_00115 NZ_QYTD01000001.1 Protein Homology CDS 17921 18205 . - 0 ID=cds-WP_000944235.1;Parent=gene-D5F94_RS00115;Dbxref=GenBank:WP_000944235.1;Name=WP_000944235.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089859.1;locus_tag=D5F94_RS00115;product=PTS sugar transporter subunit IIB;protein_id=WP_000944235.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 18208 20244 . - . ID=gene-D5F94_RS00120;Name=D5F94_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00120;old_locus_tag=D5F94_00120 NZ_QYTD01000001.1 Protein Homology CDS 18208 20244 . - 0 ID=cds-WP_016480246.1;Parent=gene-D5F94_RS00120;Dbxref=GenBank:WP_016480246.1;Name=WP_016480246.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228187.1;locus_tag=D5F94_RS00120;product=BglG family transcription antiterminator;protein_id=WP_016480246.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 20460 22085 . - . ID=gene-D5F94_RS00125;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=D5F94_RS00125;old_locus_tag=D5F94_00125 NZ_QYTD01000001.1 Protein Homology CDS 20460 22085 . - 0 ID=cds-WP_016480245.1;Parent=gene-D5F94_RS00125;Dbxref=GenBank:WP_016480245.1;Name=WP_016480245.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151019.1;locus_tag=D5F94_RS00125;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_016480245.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 22307 24337 . - . ID=gene-D5F94_RS00130;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=D5F94_RS00130;old_locus_tag=D5F94_00130 NZ_QYTD01000001.1 Protein Homology CDS 22307 24337 . - 0 ID=cds-WP_016480244.1;Parent=gene-D5F94_RS00130;Dbxref=GenBank:WP_016480244.1;Name=WP_016480244.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480244.1;locus_tag=D5F94_RS00130;product=PTS system trehalose-specific EIIBC component;protein_id=WP_016480244.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 24620 25246 . - . ID=gene-D5F94_RS00135;Name=D5F94_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00135;old_locus_tag=D5F94_00135 NZ_QYTD01000001.1 Protein Homology CDS 24620 25246 . - 0 ID=cds-WP_000171306.1;Parent=gene-D5F94_RS00135;Dbxref=GenBank:WP_000171306.1;Name=WP_000171306.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932323.1;locus_tag=D5F94_RS00135;product=ABC transporter ATP-binding protein;protein_id=WP_000171306.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 25230 26033 . - . ID=gene-D5F94_RS00140;Name=D5F94_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00140;old_locus_tag=D5F94_00140 NZ_QYTD01000001.1 Protein Homology CDS 25230 26033 . - 0 ID=cds-WP_124749322.1;Parent=gene-D5F94_RS00140;Dbxref=GenBank:WP_124749322.1;Name=WP_124749322.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140979.1;locus_tag=D5F94_RS00140;product=ATP-binding cassette domain-containing protein;protein_id=WP_124749322.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 26045 26866 . - . ID=gene-D5F94_RS00145;Name=D5F94_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00145;old_locus_tag=D5F94_00145 NZ_QYTD01000001.1 Protein Homology CDS 26045 26866 . - 0 ID=cds-WP_000603397.1;Parent=gene-D5F94_RS00145;Dbxref=GenBank:WP_000603397.1;Name=WP_000603397.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631767.1;locus_tag=D5F94_RS00145;product=ABC transporter permease;protein_id=WP_000603397.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 26863 27840 . - . ID=gene-D5F94_RS00150;Name=D5F94_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00150;old_locus_tag=D5F94_00150 NZ_QYTD01000001.1 Protein Homology CDS 26863 27840 . - 0 ID=cds-WP_000680645.1;Parent=gene-D5F94_RS00150;Dbxref=GenBank:WP_000680645.1;Name=WP_000680645.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680642.1;locus_tag=D5F94_RS00150;product=ABC transporter permease;protein_id=WP_000680645.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 27953 29581 . - . ID=gene-D5F94_RS00155;Name=D5F94_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00155;old_locus_tag=D5F94_00155 NZ_QYTD01000001.1 Protein Homology CDS 27953 29581 . - 0 ID=cds-WP_000170504.1;Parent=gene-D5F94_RS00155;Dbxref=GenBank:WP_000170504.1;Name=WP_000170504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771899.1;locus_tag=D5F94_RS00155;product=ABC transporter substrate-binding protein;protein_id=WP_000170504.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 29824 30552 . - . ID=gene-D5F94_RS00165;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=D5F94_RS00165;old_locus_tag=D5F94_00165 NZ_QYTD01000001.1 Protein Homology CDS 29824 30552 . - 0 ID=cds-WP_016502443.1;Parent=gene-D5F94_RS00165;Dbxref=GenBank:WP_016502443.1;Name=WP_016502443.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421725.1;locus_tag=D5F94_RS00165;product=antiholin-like protein LrgB;protein_id=WP_016502443.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 30554 31009 . - . ID=gene-D5F94_RS00170;Name=D5F94_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00170;old_locus_tag=D5F94_00170 NZ_QYTD01000001.1 Protein Homology CDS 30554 31009 . - 0 ID=cds-WP_016480242.1;Parent=gene-D5F94_RS00170;Dbxref=GenBank:WP_016480242.1;Name=WP_016480242.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480242.1;locus_tag=D5F94_RS00170;product=CidA/LrgA family protein;protein_id=WP_016480242.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 31179 31919 . - . ID=gene-D5F94_RS00175;Name=D5F94_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00175;old_locus_tag=D5F94_00175 NZ_QYTD01000001.1 Protein Homology CDS 31179 31919 . - 0 ID=cds-WP_000697630.1;Parent=gene-D5F94_RS00175;Dbxref=GenBank:WP_000697630.1;Name=WP_000697630.1;Ontology_term=GO:0000160,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631763.1;locus_tag=D5F94_RS00175;product=LytR/AlgR family response regulator transcription factor;protein_id=WP_000697630.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 31900 33645 . - . ID=gene-D5F94_RS00180;Name=D5F94_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00180;old_locus_tag=D5F94_00180 NZ_QYTD01000001.1 Protein Homology CDS 31900 33645 . - 0 ID=cds-WP_016502442.1;Parent=gene-D5F94_RS00180;Dbxref=GenBank:WP_016502442.1;Name=WP_016502442.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930326.1;locus_tag=D5F94_RS00180;product=LytS/YhcK type 5TM receptor domain-containing protein;protein_id=WP_016502442.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 33672 34316 . - . ID=gene-D5F94_RS00185;Name=D5F94_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00185;old_locus_tag=D5F94_00185 NZ_QYTD01000001.1 Protein Homology CDS 33672 34316 . - 0 ID=cds-WP_016480241.1;Parent=gene-D5F94_RS00185;Dbxref=GenBank:WP_016480241.1;Name=WP_016480241.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416607.1;locus_tag=D5F94_RS00185;product=HAD family hydrolase;protein_id=WP_016480241.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 34440 34835 . - . ID=gene-D5F94_RS00190;Name=D5F94_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00190;old_locus_tag=D5F94_00190 NZ_QYTD01000001.1 Protein Homology CDS 34440 34835 . - 0 ID=cds-WP_000282447.1;Parent=gene-D5F94_RS00190;Dbxref=GenBank:WP_000282447.1;Name=WP_000282447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282448.1;locus_tag=D5F94_RS00190;product=single-stranded DNA-binding protein;protein_id=WP_000282447.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 34916 35632 . + . ID=gene-D5F94_RS00195;Name=D5F94_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00195;old_locus_tag=D5F94_00195 NZ_QYTD01000001.1 Protein Homology CDS 34916 35632 . + 0 ID=cds-WP_016480240.1;Parent=gene-D5F94_RS00195;Dbxref=GenBank:WP_016480240.1;Name=WP_016480240.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186175.1;locus_tag=D5F94_RS00195;product=class I SAM-dependent methyltransferase;protein_id=WP_016480240.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 35686 36312 . - . ID=gene-D5F94_RS00200;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=D5F94_RS00200;old_locus_tag=D5F94_00200 NZ_QYTD01000001.1 Protein Homology CDS 35686 36312 . - 0 ID=cds-WP_016502441.1;Parent=gene-D5F94_RS00200;Dbxref=GenBank:WP_016502441.1;Name=WP_016502441.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646647.1;locus_tag=D5F94_RS00200;product=YtpR family tRNA-binding protein;protein_id=WP_016502441.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 36345 36668 . - . ID=gene-D5F94_RS00205;Name=D5F94_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00205;old_locus_tag=D5F94_00205 NZ_QYTD01000001.1 Protein Homology CDS 36345 36668 . - 0 ID=cds-WP_000602783.1;Parent=gene-D5F94_RS00205;Dbxref=GenBank:WP_000602783.1;Name=WP_000602783.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602781.1;locus_tag=D5F94_RS00205;product=thioredoxin family protein;protein_id=WP_000602783.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 36665 36949 . - . ID=gene-D5F94_RS00210;Name=D5F94_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00210;old_locus_tag=D5F94_00210 NZ_QYTD01000001.1 Protein Homology CDS 36665 36949 . - 0 ID=cds-WP_016502440.1;Parent=gene-D5F94_RS00210;Dbxref=GenBank:WP_016502440.1;Name=WP_016502440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644219.1;locus_tag=D5F94_RS00210;product=DUF4651 domain-containing protein;protein_id=WP_016502440.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 37110 37349 . + . ID=gene-D5F94_RS00215;Name=D5F94_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00215;old_locus_tag=D5F94_00215 NZ_QYTD01000001.1 Protein Homology CDS 37110 37349 . + 0 ID=cds-WP_000660180.1;Parent=gene-D5F94_RS00215;Dbxref=GenBank:WP_000660180.1;Name=WP_000660180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649272.1;locus_tag=D5F94_RS00215;product=hypothetical protein;protein_id=WP_000660180.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 37534 38601 . + . ID=gene-D5F94_RS00220;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=D5F94_RS00220;old_locus_tag=D5F94_00220 NZ_QYTD01000001.1 Protein Homology CDS 37534 38601 . + 0 ID=cds-WP_016502438.1;Parent=gene-D5F94_RS00220;Dbxref=GenBank:WP_016502438.1;Name=WP_016502438.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281319.1;locus_tag=D5F94_RS00220;product=glutamyl aminopeptidase;protein_id=WP_016502438.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 38671 39441 . + . ID=gene-D5F94_RS00225;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=D5F94_RS00225;old_locus_tag=D5F94_00225 NZ_QYTD01000001.1 Protein Homology CDS 38671 39441 . + 0 ID=cds-WP_016502437.1;Parent=gene-D5F94_RS00225;Dbxref=GenBank:WP_016502437.1;Name=WP_016502437.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480237.1;locus_tag=D5F94_RS00225;product=pyrroline-5-carboxylate reductase;protein_id=WP_016502437.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 39462 40127 . - . ID=gene-D5F94_RS00230;Name=D5F94_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00230;old_locus_tag=D5F94_00230 NZ_QYTD01000001.1 Protein Homology CDS 39462 40127 . - 0 ID=cds-WP_016502436.1;Parent=gene-D5F94_RS00230;Dbxref=GenBank:WP_016502436.1;Name=WP_016502436.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008115.1;locus_tag=D5F94_RS00230;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016502436.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 40196 40651 . - . ID=gene-D5F94_RS00235;Name=D5F94_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00235;old_locus_tag=D5F94_00235 NZ_QYTD01000001.1 Protein Homology CDS 40196 40651 . - 0 ID=cds-WP_124749063.1;Parent=gene-D5F94_RS00235;Dbxref=GenBank:WP_124749063.1;Name=WP_124749063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905672.1;locus_tag=D5F94_RS00235;product=hypothetical protein;protein_id=WP_124749063.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 40888 41095 . - . ID=gene-D5F94_RS00245;Name=D5F94_RS00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00245;old_locus_tag=D5F94_00245;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 40888 41095 . - 0 ID=cds-D5F94_RS00245;Parent=gene-D5F94_RS00245;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798241.1;locus_tag=D5F94_RS00245;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 41223 42416 . - . ID=gene-D5F94_RS00250;Name=D5F94_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00250;old_locus_tag=D5F94_00250 NZ_QYTD01000001.1 Protein Homology CDS 41223 42416 . - 0 ID=cds-WP_000047534.1;Parent=gene-D5F94_RS00250;Dbxref=GenBank:WP_000047534.1;Name=WP_000047534.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047536.1;locus_tag=D5F94_RS00250;product=acetate kinase;protein_id=WP_000047534.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 42448 43422 . - . ID=gene-D5F94_RS00255;Name=D5F94_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00255;old_locus_tag=D5F94_00255 NZ_QYTD01000001.1 Protein Homology CDS 42448 43422 . - 0 ID=cds-WP_016502433.1;Parent=gene-D5F94_RS00255;Dbxref=GenBank:WP_016502433.1;Name=WP_016502433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649274.1;locus_tag=D5F94_RS00255;product=class I SAM-dependent methyltransferase;protein_id=WP_016502433.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 43537 43908 . - . ID=gene-D5F94_RS00260;Name=comGG;gbkey=Gene;gene=comGG;gene_biotype=protein_coding;locus_tag=D5F94_RS00260;old_locus_tag=D5F94_00260 NZ_QYTD01000001.1 Protein Homology CDS 43537 43908 . - 0 ID=cds-WP_016502432.1;Parent=gene-D5F94_RS00260;Dbxref=GenBank:WP_016502432.1;Name=WP_016502432.1;gbkey=CDS;gene=comGG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000601101.1;locus_tag=D5F94_RS00260;product=competence type IV pilus minor pilin ComGG;protein_id=WP_016502432.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 43886 44341 . - . ID=gene-D5F94_RS00265;Name=comGF;gbkey=Gene;gene=comGF;gene_biotype=protein_coding;locus_tag=D5F94_RS00265;old_locus_tag=D5F94_00265 NZ_QYTD01000001.1 Protein Homology CDS 43886 44341 . - 0 ID=cds-WP_016502431.1;Parent=gene-D5F94_RS00265;Dbxref=GenBank:WP_016502431.1;Name=WP_016502431.1;gbkey=CDS;gene=comGF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793379.1;locus_tag=D5F94_RS00265;product=competence type IV pilus minor pilin ComGF;protein_id=WP_016502431.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 44338 45381 . - . ID=gene-D5F94_RS00270;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=D5F94_RS00270;old_locus_tag=D5F94_00270 NZ_QYTD01000001.1 Protein Homology CDS 44338 45381 . - 0 ID=cds-WP_257638778.1;Parent=gene-D5F94_RS00270;Dbxref=GenBank:WP_257638778.1;Name=WP_257638778.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074699.1;locus_tag=D5F94_RS00270;product=competence type IV pilus assembly protein ComGB;protein_id=WP_257638778.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 45275 46246 . - . ID=gene-D5F94_RS00275;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=D5F94_RS00275;old_locus_tag=D5F94_00275 NZ_QYTD01000001.1 Protein Homology CDS 45275 46246 . - 0 ID=cds-WP_086163193.1;Parent=gene-D5F94_RS00275;Dbxref=GenBank:WP_086163193.1;Name=WP_086163193.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000250804.1;locus_tag=D5F94_RS00275;product=competence type IV pilus ATPase ComGA;protein_id=WP_086163193.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 46418 46783 . - . ID=gene-D5F94_RS00285;Name=D5F94_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00285;old_locus_tag=D5F94_00285 NZ_QYTD01000001.1 Protein Homology CDS 46418 46783 . - 0 ID=cds-WP_000285373.1;Parent=gene-D5F94_RS00285;Dbxref=GenBank:WP_000285373.1;Name=WP_000285373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285371.1;locus_tag=D5F94_RS00285;product=DUF1033 family protein;protein_id=WP_000285373.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 46897 50547 . - . ID=gene-D5F94_RS00290;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=D5F94_RS00290;old_locus_tag=D5F94_00290 NZ_QYTD01000001.1 Protein Homology CDS 46897 50547 . - 0 ID=cds-WP_000228729.1;Parent=gene-D5F94_RS00290;Dbxref=GenBank:WP_000228729.1;Name=WP_000228729.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631755.1;locus_tag=D5F94_RS00290;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000228729.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 50664 54239 . - . ID=gene-D5F94_RS00295;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=D5F94_RS00295;old_locus_tag=D5F94_00295 NZ_QYTD01000001.1 Protein Homology CDS 50664 54239 . - 0 ID=cds-WP_016502428.1;Parent=gene-D5F94_RS00295;Dbxref=GenBank:WP_016502428.1;Name=WP_016502428.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907193.1;locus_tag=D5F94_RS00295;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_016502428.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 54763 57060 . - . ID=gene-D5F94_RS00300;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=D5F94_RS00300;old_locus_tag=D5F94_00300 NZ_QYTD01000001.1 Protein Homology CDS 54763 57060 . - 0 ID=cds-WP_000472390.1;Parent=gene-D5F94_RS00300;Dbxref=GenBank:WP_000472390.1;Name=WP_000472390.1;gbkey=CDS;gene=pbp1b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646300.1;locus_tag=D5F94_RS00300;product=penicillin-binding protein PBP1B;protein_id=WP_000472390.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 57171 58430 . + . ID=gene-D5F94_RS00305;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=D5F94_RS00305;old_locus_tag=D5F94_00305 NZ_QYTD01000001.1 Protein Homology CDS 57171 58430 . + 0 ID=cds-WP_001019849.1;Parent=gene-D5F94_RS00305;Dbxref=GenBank:WP_001019849.1;Name=WP_001019849.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058310.1;locus_tag=D5F94_RS00305;product=tyrosine--tRNA ligase;protein_id=WP_001019849.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 59010 60041 . + . ID=gene-D5F94_RS00310;Name=D5F94_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00310;old_locus_tag=D5F94_00310 NZ_QYTD01000001.1 Protein Homology CDS 59010 60041 . + 0 ID=cds-WP_000777422.1;Parent=gene-D5F94_RS00310;Dbxref=GenBank:WP_000777422.1;Name=WP_000777422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767962.1;locus_tag=D5F94_RS00310;product=DNA/RNA non-specific endonuclease;protein_id=WP_000777422.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 60252 61064 . - . ID=gene-D5F94_RS00315;Name=D5F94_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00315;old_locus_tag=D5F94_00315 NZ_QYTD01000001.1 Protein Homology CDS 60252 61064 . - 0 ID=cds-WP_000923269.1;Parent=gene-D5F94_RS00315;Dbxref=GenBank:WP_000923269.1;Name=WP_000923269.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923271.1;locus_tag=D5F94_RS00315;product=metal ABC transporter permease;protein_id=WP_000923269.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 61054 61764 . - . ID=gene-D5F94_RS00320;Name=D5F94_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00320;old_locus_tag=D5F94_00320 NZ_QYTD01000001.1 Protein Homology CDS 61054 61764 . - 0 ID=cds-WP_001269501.1;Parent=gene-D5F94_RS00320;Dbxref=GenBank:WP_001269501.1;Name=WP_001269501.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269500.1;locus_tag=D5F94_RS00320;product=metal ABC transporter ATP-binding protein;protein_id=WP_001269501.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 61767 62210 . - . ID=gene-D5F94_RS00325;Name=D5F94_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00325;old_locus_tag=D5F94_00325 NZ_QYTD01000001.1 Protein Homology CDS 61767 62210 . - 0 ID=cds-WP_000217076.1;Parent=gene-D5F94_RS00325;Dbxref=GenBank:WP_000217076.1;Name=WP_000217076.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986587.1;locus_tag=D5F94_RS00325;product=zinc-dependent MarR family transcriptional regulator;protein_id=WP_000217076.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 62296 63147 . - . ID=gene-D5F94_RS00330;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=D5F94_RS00330;old_locus_tag=D5F94_00330 NZ_QYTD01000001.1 Protein Homology CDS 62296 63147 . - 0 ID=cds-WP_000688172.1;Parent=gene-D5F94_RS00330;Dbxref=GenBank:WP_000688172.1;Name=WP_000688172.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688173.1;locus_tag=D5F94_RS00330;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000688172.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 63288 63361 . - . ID=gene-D5F94_RS00335;Name=D5F94_RS00335;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS00335;old_locus_tag=D5F94_00335 NZ_QYTD01000001.1 tRNAscan-SE tRNA 63288 63361 . - . ID=rna-D5F94_RS00335;Parent=gene-D5F94_RS00335;anticodon=(pos:complement(63325..63327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00335;product=tRNA-Asn NZ_QYTD01000001.1 tRNAscan-SE exon 63288 63361 . - . ID=exon-D5F94_RS00335-1;Parent=rna-D5F94_RS00335;anticodon=(pos:complement(63325..63327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00335;product=tRNA-Asn NZ_QYTD01000001.1 RefSeq gene 63367 63482 . - . ID=gene-D5F94_RS00340;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F94_RS00340;old_locus_tag=D5F94_00340 NZ_QYTD01000001.1 cmsearch rRNA 63367 63482 . - . ID=rna-D5F94_RS00340;Parent=gene-D5F94_RS00340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00340;product=5S ribosomal RNA NZ_QYTD01000001.1 cmsearch exon 63367 63482 . - . ID=exon-D5F94_RS00340-1;Parent=rna-D5F94_RS00340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00340;product=5S ribosomal RNA NZ_QYTD01000001.1 RefSeq gene 63557 66459 . - . ID=gene-D5F94_RS00345;Name=D5F94_RS00345;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F94_RS00345;old_locus_tag=D5F94_00345 NZ_QYTD01000001.1 cmsearch rRNA 63557 66459 . - . ID=rna-D5F94_RS00345;Parent=gene-D5F94_RS00345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00345;product=23S ribosomal RNA NZ_QYTD01000001.1 cmsearch exon 63557 66459 . - . ID=exon-D5F94_RS00345-1;Parent=rna-D5F94_RS00345;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00345;product=23S ribosomal RNA NZ_QYTD01000001.1 RefSeq gene 66614 66686 . - . ID=gene-D5F94_RS00350;Name=D5F94_RS00350;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS00350;old_locus_tag=D5F94_00350 NZ_QYTD01000001.1 tRNAscan-SE tRNA 66614 66686 . - . ID=rna-D5F94_RS00350;Parent=gene-D5F94_RS00350;anticodon=(pos:complement(66651..66653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00350;product=tRNA-Ala NZ_QYTD01000001.1 tRNAscan-SE exon 66614 66686 . - . ID=exon-D5F94_RS00350-1;Parent=rna-D5F94_RS00350;anticodon=(pos:complement(66651..66653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00350;product=tRNA-Ala NZ_QYTD01000001.1 RefSeq gene 66741 68289 . - . ID=gene-D5F94_RS00355;Name=D5F94_RS00355;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F94_RS00355;old_locus_tag=D5F94_00355 NZ_QYTD01000001.1 cmsearch rRNA 66741 68289 . - . ID=rna-D5F94_RS00355;Parent=gene-D5F94_RS00355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00355;product=16S ribosomal RNA NZ_QYTD01000001.1 cmsearch exon 66741 68289 . - . ID=exon-D5F94_RS00355-1;Parent=rna-D5F94_RS00355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS00355;product=16S ribosomal RNA NZ_QYTD01000001.1 RefSeq gene 68710 69855 . + . ID=gene-D5F94_RS00360;Name=D5F94_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00360;old_locus_tag=D5F94_00360 NZ_QYTD01000001.1 Protein Homology CDS 68710 69855 . + 0 ID=cds-WP_000529593.1;Parent=gene-D5F94_RS00360;Dbxref=GenBank:WP_000529593.1;Name=WP_000529593.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529591.1;locus_tag=D5F94_RS00360;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_000529593.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 69855 70490 . + . ID=gene-D5F94_RS00365;Name=D5F94_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00365;old_locus_tag=D5F94_00365 NZ_QYTD01000001.1 Protein Homology CDS 69855 70490 . + 0 ID=cds-WP_000247053.1;Parent=gene-D5F94_RS00365;Dbxref=GenBank:WP_000247053.1;Name=WP_000247053.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247049.1;locus_tag=D5F94_RS00365;product=ABC transporter permease;protein_id=WP_000247053.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 70607 71419 . + . ID=gene-D5F94_RS00370;Name=D5F94_RS00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00370;old_locus_tag=D5F94_00370;partial=true;pseudo=true;start_range=.,70607 NZ_QYTD01000001.1 Protein Homology CDS 70607 71419 . + 0 ID=cds-D5F94_RS00370;Parent=gene-D5F94_RS00370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003562594.1;locus_tag=D5F94_RS00370;partial=true;product=osmoprotectant ABC transporter substrate-binding protein;pseudo=true;start_range=.,70607;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 71420 72070 . + . ID=gene-D5F94_RS00375;Name=D5F94_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00375;old_locus_tag=D5F94_00375 NZ_QYTD01000001.1 Protein Homology CDS 71420 72070 . + 0 ID=cds-WP_185690684.1;Parent=gene-D5F94_RS00375;Dbxref=GenBank:WP_185690684.1;Name=WP_185690684.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767937.1;locus_tag=D5F94_RS00375;product=ABC transporter permease;protein_id=WP_185690684.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 72132 73313 . - . ID=gene-D5F94_RS00380;Name=D5F94_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00380;old_locus_tag=D5F94_00380 NZ_QYTD01000001.1 Protein Homology CDS 72132 73313 . - 0 ID=cds-WP_016480267.1;Parent=gene-D5F94_RS00380;Dbxref=GenBank:WP_016480267.1;Name=WP_016480267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024508.1;locus_tag=D5F94_RS00380;product=MFS transporter;protein_id=WP_016480267.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 73386 74235 . - . ID=gene-D5F94_RS00385;Name=D5F94_RS00385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00385;old_locus_tag=D5F94_00385;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 73386 74235 . - 0 ID=cds-D5F94_RS00385;Parent=gene-D5F94_RS00385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285452.1;locus_tag=D5F94_RS00385;product=Rgg family transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 75075 75938 . + . ID=gene-D5F94_RS00400;Name=D5F94_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00400;old_locus_tag=D5F94_00400 NZ_QYTD01000001.1 Protein Homology CDS 75075 75938 . + 0 ID=cds-WP_124749324.1;Parent=gene-D5F94_RS00400;Dbxref=GenBank:WP_124749324.1;Name=WP_124749324.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F94_RS00400;product=IS982 family transposase;protein_id=WP_124749324.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 75898 76797 . - . ID=gene-D5F94_RS00405;Name=D5F94_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00405;old_locus_tag=D5F94_00405 NZ_QYTD01000001.1 Protein Homology CDS 75898 76797 . - 0 ID=cds-WP_016502714.1;Parent=gene-D5F94_RS00405;Dbxref=GenBank:WP_016502714.1;Name=WP_016502714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502714.1;locus_tag=D5F94_RS00405;product=helix-turn-helix domain-containing protein;protein_id=WP_016502714.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 77002 77577 . + . ID=gene-D5F94_RS00410;Name=D5F94_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00410;old_locus_tag=D5F94_00410 NZ_QYTD01000001.1 Protein Homology CDS 77002 77577 . + 0 ID=cds-WP_016480459.1;Parent=gene-D5F94_RS00410;Dbxref=GenBank:WP_016480459.1;Name=WP_016480459.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480459.1;locus_tag=D5F94_RS00410;product=histidine phosphatase family protein;protein_id=WP_016480459.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 77579 78949 . + . ID=gene-D5F94_RS00415;Name=D5F94_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00415;old_locus_tag=D5F94_00415 NZ_QYTD01000001.1 Protein Homology CDS 77579 78949 . + 0 ID=cds-WP_260424798.1;Parent=gene-D5F94_RS00415;Dbxref=GenBank:WP_260424798.1;Name=WP_260424798.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013567.7;locus_tag=D5F94_RS00415;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_260424798.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 79269 82148 . + . ID=gene-D5F94_RS00420;Name=D5F94_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00420;old_locus_tag=D5F94_00420 NZ_QYTD01000001.1 Protein Homology CDS 79269 82148 . + 0 ID=cds-WP_124749325.1;Parent=gene-D5F94_RS00420;Dbxref=GenBank:WP_124749325.1;Name=WP_124749325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480461.1;locus_tag=D5F94_RS00420;product=AMP-binding protein;protein_id=WP_124749325.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 82121 83311 . + . ID=gene-D5F94_RS00425;Name=D5F94_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00425;old_locus_tag=D5F94_00425 NZ_QYTD01000001.1 Protein Homology CDS 82121 83311 . + 0 ID=cds-WP_016480462.1;Parent=gene-D5F94_RS00425;Dbxref=GenBank:WP_016480462.1;Name=WP_016480462.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480462.1;locus_tag=D5F94_RS00425;product=MFS transporter;protein_id=WP_016480462.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 83318 84262 . + . ID=gene-D5F94_RS00430;Name=D5F94_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00430;old_locus_tag=D5F94_00430 NZ_QYTD01000001.1 Protein Homology CDS 83318 84262 . + 0 ID=cds-WP_016480463.1;Parent=gene-D5F94_RS00430;Dbxref=GenBank:WP_016480463.1;Name=WP_016480463.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480463.1;locus_tag=D5F94_RS00430;product=NAD(P)-dependent oxidoreductase;protein_id=WP_016480463.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 84263 84844 . + . ID=gene-D5F94_RS00435;Name=D5F94_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00435;old_locus_tag=D5F94_00435 NZ_QYTD01000001.1 Protein Homology CDS 84263 84844 . + 0 ID=cds-WP_124749326.1;Parent=gene-D5F94_RS00435;Dbxref=GenBank:WP_124749326.1;Name=WP_124749326.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003698160.1;locus_tag=D5F94_RS00435;product=GNAT family N-acetyltransferase;protein_id=WP_124749326.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 84837 86285 . + . ID=gene-D5F94_RS00440;Name=D5F94_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00440;old_locus_tag=D5F94_00440 NZ_QYTD01000001.1 Protein Homology CDS 84837 86285 . + 0 ID=cds-WP_185690649.1;Parent=gene-D5F94_RS00440;Dbxref=GenBank:WP_185690649.1;Name=WP_185690649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.6;locus_tag=D5F94_RS00440;product=AMP-binding protein;protein_id=WP_185690649.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 86378 86995 . - . ID=gene-D5F94_RS00445;Name=D5F94_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00445;old_locus_tag=D5F94_00445 NZ_QYTD01000001.1 Protein Homology CDS 86378 86995 . - 0 ID=cds-WP_016480467.1;Parent=gene-D5F94_RS00445;Dbxref=GenBank:WP_016480467.1;Name=WP_016480467.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011226260.1;locus_tag=D5F94_RS00445;product=LysE family translocator;protein_id=WP_016480467.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 86997 87992 . - . ID=gene-D5F94_RS10580;Name=D5F94_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10580 NZ_QYTD01000001.1 Protein Homology CDS 86997 87992 . - 0 ID=cds-WP_016480468.1;Parent=gene-D5F94_RS10580;Dbxref=GenBank:WP_016480468.1;Name=WP_016480468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480468.1;locus_tag=D5F94_RS10580;product=hypothetical protein;protein_id=WP_016480468.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 88208 89638 . + . ID=gene-D5F94_RS00460;Name=D5F94_RS00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00460;old_locus_tag=D5F94_00460;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 88208 89638 . + 0 ID=cds-D5F94_RS00460;Parent=gene-D5F94_RS00460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001869561.1;locus_tag=D5F94_RS00460;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 89771 90367 . + . ID=gene-D5F94_RS00465;Name=D5F94_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00465;old_locus_tag=D5F94_00465 NZ_QYTD01000001.1 Protein Homology CDS 89771 90367 . + 0 ID=cds-WP_016502724.1;Parent=gene-D5F94_RS00465;Dbxref=GenBank:WP_016502724.1;Name=WP_016502724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502724.1;locus_tag=D5F94_RS00465;product=hypothetical protein;protein_id=WP_016502724.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 90546 91307 . - . ID=gene-D5F94_RS00470;Name=D5F94_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00470;old_locus_tag=D5F94_00470 NZ_QYTD01000001.1 Protein Homology CDS 90546 91307 . - 0 ID=cds-WP_079269279.1;Parent=gene-D5F94_RS00470;Dbxref=GenBank:WP_079269279.1;Name=WP_079269279.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.6;locus_tag=D5F94_RS00470;product=AbiH family protein;protein_id=WP_079269279.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 91477 92621 . + . ID=gene-D5F94_RS00475;Name=D5F94_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00475;old_locus_tag=D5F94_00475 NZ_QYTD01000001.1 Protein Homology CDS 91477 91708 . + 0 ID=cds-WP_124749327.1;Parent=gene-D5F94_RS00475;Dbxref=GenBank:WP_124749327.1;Name=WP_124749327.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS00475;product=IS3 family transposase;protein_id=WP_124749327.1;transl_table=11 NZ_QYTD01000001.1 Protein Homology CDS 91708 92621 . + 2 ID=cds-WP_124749327.1;Parent=gene-D5F94_RS00475;Dbxref=GenBank:WP_124749327.1;Name=WP_124749327.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS00475;product=IS3 family transposase;protein_id=WP_124749327.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 92760 93914 . - . ID=gene-D5F94_RS00480;Name=D5F94_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00480;old_locus_tag=D5F94_00480 NZ_QYTD01000001.1 Protein Homology CDS 92760 93914 . - 0 ID=cds-WP_000623425.1;Parent=gene-D5F94_RS00480;Dbxref=GenBank:WP_000623425.1;Name=WP_000623425.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058800.1;locus_tag=D5F94_RS00480;product=ABC transporter permease subunit;protein_id=WP_000623425.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 93920 94768 . - . ID=gene-D5F94_RS00485;Name=D5F94_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00485;old_locus_tag=D5F94_00485 NZ_QYTD01000001.1 Protein Homology CDS 93920 94768 . - 0 ID=cds-WP_016503281.1;Parent=gene-D5F94_RS00485;Dbxref=GenBank:WP_016503281.1;Name=WP_016503281.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926579.1;locus_tag=D5F94_RS00485;product=ABC transporter ATP-binding protein;protein_id=WP_016503281.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 94837 95010 . - . ID=gene-D5F94_RS00490;Name=D5F94_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00490;old_locus_tag=D5F94_00490 NZ_QYTD01000001.1 Protein Homology CDS 94837 95010 . - 0 ID=cds-WP_086163502.1;Parent=gene-D5F94_RS00490;Dbxref=GenBank:WP_086163502.1;Name=WP_086163502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683598.1;locus_tag=D5F94_RS00490;product=transcriptional regulator;protein_id=WP_086163502.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 95299 95463 . + . ID=gene-D5F94_RS00495;Name=D5F94_RS00495;end_range=95463,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00495;old_locus_tag=D5F94_00495;partial=true;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 95299 95463 . + 0 ID=cds-D5F94_RS00495;Parent=gene-D5F94_RS00495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;end_range=95463,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205155.1;locus_tag=D5F94_RS00495;partial=true;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 95552 96523 . - . ID=gene-D5F94_RS00500;Name=D5F94_RS00500;end_range=96523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00500;old_locus_tag=D5F94_00500;partial=true;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 95552 96523 . - 0 ID=cds-D5F94_RS00500;Parent=gene-D5F94_RS00500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;end_range=96523,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089363.1;locus_tag=D5F94_RS00500;partial=true;product=sensor histidine kinase;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 96487 97074 . - . ID=gene-D5F94_RS00505;Name=D5F94_RS00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00505;old_locus_tag=D5F94_00505;partial=true;pseudo=true;start_range=.,96487 NZ_QYTD01000001.1 Protein Homology CDS 96487 97074 . - 0 ID=cds-D5F94_RS00505;Parent=gene-D5F94_RS00505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650163.1;locus_tag=D5F94_RS00505;partial=true;product=response regulator;pseudo=true;start_range=.,96487;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 97290 98105 . - . ID=gene-D5F94_RS00515;Name=D5F94_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00515;old_locus_tag=D5F94_00515 NZ_QYTD01000001.1 Protein Homology CDS 97290 98105 . - 0 ID=cds-WP_016481281.1;Parent=gene-D5F94_RS00515;Dbxref=GenBank:WP_016481281.1;Name=WP_016481281.1;Ontology_term=GO:0003677,GO:0016787,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029870.1;locus_tag=D5F94_RS00515;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_016481281.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 98159 100339 . - . ID=gene-D5F94_RS00520;Name=D5F94_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00520;old_locus_tag=D5F94_00520 NZ_QYTD01000001.1 Protein Homology CDS 98159 100339 . - 0 ID=cds-WP_016481282.1;Parent=gene-D5F94_RS00520;Dbxref=GenBank:WP_016481282.1;Name=WP_016481282.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795069.1;locus_tag=D5F94_RS00520;product=PTS transporter subunit IIBC;protein_id=WP_016481282.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 100497 102152 . - . ID=gene-D5F94_RS00525;Name=D5F94_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00525;old_locus_tag=D5F94_00525 NZ_QYTD01000001.1 Protein Homology CDS 100497 102152 . - 0 ID=cds-WP_016503285.1;Parent=gene-D5F94_RS00525;Dbxref=GenBank:WP_016503285.1;Name=WP_016503285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162297.1;locus_tag=D5F94_RS00525;product=sensor histidine kinase;protein_id=WP_016503285.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 102145 102822 . - . ID=gene-D5F94_RS00530;Name=D5F94_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00530;old_locus_tag=D5F94_00530 NZ_QYTD01000001.1 Protein Homology CDS 102145 102822 . - 0 ID=cds-WP_000638643.1;Parent=gene-D5F94_RS00530;Dbxref=GenBank:WP_000638643.1;Name=WP_000638643.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001931721.1;locus_tag=D5F94_RS00530;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000638643.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 102822 103478 . - . ID=gene-D5F94_RS00535;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=D5F94_RS00535;old_locus_tag=D5F94_00535 NZ_QYTD01000001.1 Protein Homology CDS 102822 103478 . - 0 ID=cds-WP_000621377.1;Parent=gene-D5F94_RS00535;Dbxref=GenBank:WP_000621377.1;Name=WP_000621377.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621378.1;locus_tag=D5F94_RS00535;product=phosphate signaling complex protein PhoU;protein_id=WP_000621377.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 103475 104224 . - . ID=gene-D5F94_RS00540;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F94_RS00540;old_locus_tag=D5F94_00540 NZ_QYTD01000001.1 Protein Homology CDS 103475 104224 . - 0 ID=cds-WP_016503286.1;Parent=gene-D5F94_RS00540;Dbxref=GenBank:WP_016503286.1;Name=WP_016503286.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041123.1;locus_tag=D5F94_RS00540;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_016503286.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 104217 105095 . - . ID=gene-D5F94_RS00545;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D5F94_RS00545;old_locus_tag=D5F94_00545 NZ_QYTD01000001.1 Protein Homology CDS 104217 105095 . - 0 ID=cds-WP_000427916.1;Parent=gene-D5F94_RS00545;Dbxref=GenBank:WP_000427916.1;Name=WP_000427916.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427916.1;locus_tag=D5F94_RS00545;product=phosphate ABC transporter permease PstA;protein_id=WP_000427916.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 105097 105942 . - . ID=gene-D5F94_RS00550;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D5F94_RS00550;old_locus_tag=D5F94_00550 NZ_QYTD01000001.1 Protein Homology CDS 105097 105942 . - 0 ID=cds-WP_000814831.1;Parent=gene-D5F94_RS00550;Dbxref=GenBank:WP_000814831.1;Name=WP_000814831.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481285.1;locus_tag=D5F94_RS00550;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_000814831.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 105957 106838 . - . ID=gene-D5F94_RS00555;Name=D5F94_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00555;old_locus_tag=D5F94_00555 NZ_QYTD01000001.1 Protein Homology CDS 105957 106838 . - 0 ID=cds-WP_000716331.1;Parent=gene-D5F94_RS00555;Dbxref=GenBank:WP_000716331.1;Name=WP_000716331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716337.1;locus_tag=D5F94_RS00555;product=substrate-binding domain-containing protein;protein_id=WP_000716331.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 106968 107528 . - . ID=gene-D5F94_RS00560;Name=D5F94_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00560;old_locus_tag=D5F94_00560 NZ_QYTD01000001.1 Protein Homology CDS 106968 107528 . - 0 ID=cds-WP_016503288.1;Parent=gene-D5F94_RS00560;Dbxref=GenBank:WP_016503288.1;Name=WP_016503288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582351.1;locus_tag=D5F94_RS00560;product=AAA family ATPase;protein_id=WP_016503288.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 107525 108265 . - . ID=gene-D5F94_RS00565;Name=D5F94_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00565;old_locus_tag=D5F94_00565 NZ_QYTD01000001.1 Protein Homology CDS 107525 108265 . - 0 ID=cds-WP_016503289.1;Parent=gene-D5F94_RS00565;Dbxref=GenBank:WP_016503289.1;Name=WP_016503289.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188249.1;locus_tag=D5F94_RS00565;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_016503289.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 108265 109218 . - . ID=gene-D5F94_RS00570;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=D5F94_RS00570;old_locus_tag=D5F94_00570 NZ_QYTD01000001.1 Protein Homology CDS 108265 109218 . - 0 ID=cds-WP_016503290.1;Parent=gene-D5F94_RS00570;Dbxref=GenBank:WP_016503290.1;Name=WP_016503290.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011225343.1;locus_tag=D5F94_RS00570;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_016503290.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 109215 109679 . - . ID=gene-D5F94_RS00575;Name=D5F94_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00575;old_locus_tag=D5F94_00575 NZ_QYTD01000001.1 Protein Homology CDS 109215 109679 . - 0 ID=cds-WP_307777622.1;Parent=gene-D5F94_RS00575;Dbxref=GenBank:WP_307777622.1;Name=WP_307777622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020451.6;locus_tag=D5F94_RS00575;product=MepB family protein;protein_id=WP_307777622.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 109797 110513 . + . ID=gene-D5F94_RS00580;Name=D5F94_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00580;old_locus_tag=D5F94_00580 NZ_QYTD01000001.1 Protein Homology CDS 109797 110513 . + 0 ID=cds-WP_000859570.1;Parent=gene-D5F94_RS00580;Dbxref=GenBank:WP_000859570.1;Name=WP_000859570.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481292.1;locus_tag=D5F94_RS00580;product=MerR family transcriptional regulator;protein_id=WP_000859570.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 110552 111022 . - . ID=gene-D5F94_RS00585;Name=D5F94_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00585;old_locus_tag=D5F94_00585 NZ_QYTD01000001.1 Protein Homology CDS 110552 111022 . - 0 ID=cds-WP_000631751.1;Parent=gene-D5F94_RS00585;Dbxref=GenBank:WP_000631751.1;Name=WP_000631751.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644311.1;locus_tag=D5F94_RS00585;product=GNAT family N-acetyltransferase;protein_id=WP_000631751.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 110994 111452 . - . ID=gene-D5F94_RS00590;Name=D5F94_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00590;old_locus_tag=D5F94_00590 NZ_QYTD01000001.1 Protein Homology CDS 110994 111452 . - 0 ID=cds-WP_000376720.1;Parent=gene-D5F94_RS00590;Dbxref=GenBank:WP_000376720.1;Name=WP_000376720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350740.1;locus_tag=D5F94_RS00590;product=NUDIX hydrolase;protein_id=WP_000376720.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 111445 111753 . - . ID=gene-D5F94_RS10530;Name=D5F94_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10530 NZ_QYTD01000001.1 Protein Homology CDS 111445 111753 . - 0 ID=cds-WP_001868493.1;Parent=gene-D5F94_RS10530;Dbxref=GenBank:WP_001868493.1;Name=WP_001868493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001868493.1;locus_tag=D5F94_RS10530;product=hypothetical protein;protein_id=WP_001868493.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 111796 112266 . - . ID=gene-D5F94_RS00600;Name=D5F94_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00600;old_locus_tag=D5F94_00600 NZ_QYTD01000001.1 Protein Homology CDS 111796 112266 . - 0 ID=cds-WP_016503293.1;Parent=gene-D5F94_RS00600;Dbxref=GenBank:WP_016503293.1;Name=WP_016503293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771424.1;locus_tag=D5F94_RS00600;product=DUF3013 family protein;protein_id=WP_016503293.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 112340 112867 . - . ID=gene-D5F94_RS00605;Name=D5F94_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00605;old_locus_tag=D5F94_00605 NZ_QYTD01000001.1 Protein Homology CDS 112340 112867 . - 0 ID=cds-WP_124749328.1;Parent=gene-D5F94_RS00605;Dbxref=GenBank:WP_124749328.1;Name=WP_124749328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031088.1;locus_tag=D5F94_RS00605;product=DUF3278 domain-containing protein;protein_id=WP_124749328.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 112870 113058 . - . ID=gene-D5F94_RS00610;Name=D5F94_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00610;old_locus_tag=D5F94_00610 NZ_QYTD01000001.1 Protein Homology CDS 112870 113058 . - 0 ID=cds-WP_001082462.1;Parent=gene-D5F94_RS00610;Dbxref=GenBank:WP_001082462.1;Name=WP_001082462.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082465.1;locus_tag=D5F94_RS00610;product=helix-turn-helix transcriptional regulator;protein_id=WP_001082462.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 113663 114154 . + . ID=gene-D5F94_RS00615;Name=D5F94_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00615;old_locus_tag=D5F94_00615 NZ_QYTD01000001.1 Protein Homology CDS 113663 114154 . + 0 ID=cds-WP_001879696.1;Parent=gene-D5F94_RS00615;Dbxref=GenBank:WP_001879696.1;Name=WP_001879696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001879696.1;locus_tag=D5F94_RS00615;product=GNAT family N-acetyltransferase;protein_id=WP_001879696.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 114147 115415 . + . ID=gene-D5F94_RS00620;Name=D5F94_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00620;old_locus_tag=D5F94_00620 NZ_QYTD01000001.1 Protein Homology CDS 114147 115415 . + 0 ID=cds-WP_016503296.1;Parent=gene-D5F94_RS00620;Dbxref=GenBank:WP_016503296.1;Name=WP_016503296.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774759.1;locus_tag=D5F94_RS00620;product=replication-associated recombination protein A;protein_id=WP_016503296.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 115485 115677 . + . ID=gene-D5F94_RS10785;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=D5F94_RS10785;old_locus_tag=D5F94_00625 NZ_QYTD01000001.1 cmsearch ncRNA 115485 115677 . + . ID=rna-D5F94_RS10785;Parent=gene-D5F94_RS10785;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS10785;product=6S RNA NZ_QYTD01000001.1 cmsearch exon 115485 115677 . + . ID=exon-D5F94_RS10785-1;Parent=rna-D5F94_RS10785;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS10785;product=6S RNA NZ_QYTD01000001.1 RefSeq gene 115678 115750 . + . ID=gene-D5F94_RS00630;Name=D5F94_RS00630;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS00630;old_locus_tag=D5F94_00630 NZ_QYTD01000001.1 tRNAscan-SE tRNA 115678 115750 . + . ID=rna-D5F94_RS00630;Parent=gene-D5F94_RS00630;anticodon=(pos:115711..115713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00630;product=tRNA-Lys NZ_QYTD01000001.1 tRNAscan-SE exon 115678 115750 . + . ID=exon-D5F94_RS00630-1;Parent=rna-D5F94_RS00630;anticodon=(pos:115711..115713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS00630;product=tRNA-Lys NZ_QYTD01000001.1 RefSeq gene 115939 116244 . - . ID=gene-D5F94_RS00635;Name=D5F94_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00635;old_locus_tag=D5F94_00635 NZ_QYTD01000001.1 Protein Homology CDS 115939 116244 . - 0 ID=cds-WP_000511798.1;Parent=gene-D5F94_RS00635;Dbxref=GenBank:WP_000511798.1;Name=WP_000511798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511796.1;locus_tag=D5F94_RS00635;product=hypothetical protein;protein_id=WP_000511798.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 116228 116629 . - . ID=gene-D5F94_RS00640;Name=D5F94_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00640;old_locus_tag=D5F94_00640 NZ_QYTD01000001.1 Protein Homology CDS 116228 116629 . - 0 ID=cds-WP_000517024.1;Parent=gene-D5F94_RS00640;Dbxref=GenBank:WP_000517024.1;Name=WP_000517024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517024.1;locus_tag=D5F94_RS00640;product=hypothetical protein;protein_id=WP_000517024.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 116617 117825 . - . ID=gene-D5F94_RS10740;Name=D5F94_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10740;old_locus_tag=D5F94_00645 NZ_QYTD01000001.1 Protein Homology CDS 116617 117825 . - 0 ID=cds-WP_000622526.1;Parent=gene-D5F94_RS10740;Dbxref=GenBank:WP_000622526.1;Name=WP_000622526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622530.1;locus_tag=D5F94_RS10740;product=hypothetical protein;protein_id=WP_000622526.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 117827 118159 . - . ID=gene-D5F94_RS00650;Name=D5F94_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00650;old_locus_tag=D5F94_00650 NZ_QYTD01000001.1 Protein Homology CDS 117827 118159 . - 0 ID=cds-WP_000792756.1;Parent=gene-D5F94_RS00650;Dbxref=GenBank:WP_000792756.1;Name=WP_000792756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000792761.1;locus_tag=D5F94_RS00650;product=hypothetical protein;protein_id=WP_000792756.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 119072 119209 . + . ID=gene-D5F94_RS10535;Name=D5F94_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10535 NZ_QYTD01000001.1 GeneMarkS-2+ CDS 119072 119209 . + 0 ID=cds-WP_162471061.1;Parent=gene-D5F94_RS10535;Dbxref=GenBank:WP_162471061.1;Name=WP_162471061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F94_RS10535;product=hypothetical protein;protein_id=WP_162471061.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 119218 119535 . + . ID=gene-D5F94_RS00655;Name=D5F94_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00655;old_locus_tag=D5F94_00655 NZ_QYTD01000001.1 Protein Homology CDS 119218 119535 . + 0 ID=cds-WP_000134167.1;Parent=gene-D5F94_RS00655;Dbxref=GenBank:WP_000134167.1;Name=WP_000134167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134166.1;locus_tag=D5F94_RS00655;product=hypothetical protein;protein_id=WP_000134167.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 119584 119712 . + . ID=gene-D5F94_RS10590;Name=D5F94_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10590 NZ_QYTD01000001.1 Protein Homology CDS 119584 119712 . + 0 ID=cds-WP_000562552.1;Parent=gene-D5F94_RS10590;Dbxref=GenBank:WP_000562552.1;Name=WP_000562552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001903830.1;locus_tag=D5F94_RS10590;product=hypothetical protein;protein_id=WP_000562552.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 119667 119831 . + . ID=gene-D5F94_RS10705;Name=D5F94_RS10705;end_range=119831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10705;old_locus_tag=D5F94_00660;partial=true;pseudo=true;start_range=.,119667 NZ_QYTD01000001.1 Protein Homology CDS 119667 119831 . + 0 ID=cds-D5F94_RS10705;Parent=gene-D5F94_RS10705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=119831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794614.1;locus_tag=D5F94_RS10705;partial=true;product=site-specific integrase;pseudo=true;start_range=.,119667;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 120153 120443 . + . ID=gene-D5F94_RS00665;Name=D5F94_RS00665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00665;old_locus_tag=D5F94_00665;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 120153 120443 . + 0 ID=cds-D5F94_RS00665;Parent=gene-D5F94_RS00665;Note=internal stop;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646948.1;locus_tag=D5F94_RS00665;product=WXG100 family type VII secretion target;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 120543 120926 . + . ID=gene-D5F94_RS00670;Name=D5F94_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00670;old_locus_tag=D5F94_00670 NZ_QYTD01000001.1 Protein Homology CDS 120543 120926 . + 0 ID=cds-WP_124749203.1;Parent=gene-D5F94_RS00670;Dbxref=GenBank:WP_124749203.1;Name=WP_124749203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731528.1;locus_tag=D5F94_RS00670;product=DUF1310 family protein;protein_id=WP_124749203.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 121206 121550 . + . ID=gene-D5F94_RS00675;Name=D5F94_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00675;old_locus_tag=D5F94_00675 NZ_QYTD01000001.1 Protein Homology CDS 121206 121550 . + 0 ID=cds-WP_124749202.1;Parent=gene-D5F94_RS00675;Dbxref=GenBank:WP_124749202.1;Name=WP_124749202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043246.1;locus_tag=D5F94_RS00675;product=hypothetical protein;protein_id=WP_124749202.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 121626 121934 . + . ID=gene-D5F94_RS00680;Name=D5F94_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00680;old_locus_tag=D5F94_00680 NZ_QYTD01000001.1 Protein Homology CDS 121626 121934 . + 0 ID=cds-WP_124749201.1;Parent=gene-D5F94_RS00680;Dbxref=GenBank:WP_124749201.1;Name=WP_124749201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266199.1;locus_tag=D5F94_RS00680;product=hypothetical protein;protein_id=WP_124749201.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 122229 122423 . + . ID=gene-D5F94_RS00685;Name=D5F94_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00685;old_locus_tag=D5F94_00685 NZ_QYTD01000001.1 Protein Homology CDS 122229 122423 . + 0 ID=cds-WP_124749200.1;Parent=gene-D5F94_RS00685;Dbxref=GenBank:WP_124749200.1;Name=WP_124749200.1;Ontology_term=GO:0044010,GO:0000987,GO:0015643;gbkey=CDS;go_function=cis-regulatory region sequence-specific DNA binding|0000987||IEA,toxic substance binding|0015643||IEA;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108715.1;locus_tag=D5F94_RS00685;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_124749200.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 122522 122847 . - . ID=gene-D5F94_RS10710;Name=D5F94_RS10710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10710;old_locus_tag=D5F94_00690;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 122522 122847 . - 0 ID=cds-D5F94_RS10710;Parent=gene-D5F94_RS10710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074758.1;locus_tag=D5F94_RS10710;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 123135 123545 . - . ID=gene-D5F94_RS00695;Name=D5F94_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00695;old_locus_tag=D5F94_00695 NZ_QYTD01000001.1 Protein Homology CDS 123135 123545 . - 0 ID=cds-WP_307777623.1;Parent=gene-D5F94_RS00695;Dbxref=GenBank:WP_307777623.1;Name=WP_307777623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731464.1;locus_tag=D5F94_RS00695;product=hypothetical protein;protein_id=WP_307777623.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 123686 124408 . - . ID=gene-D5F94_RS00700;Name=D5F94_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00700;old_locus_tag=D5F94_00700 NZ_QYTD01000001.1 Protein Homology CDS 123686 124408 . - 0 ID=cds-WP_124749329.1;Parent=gene-D5F94_RS00700;Dbxref=GenBank:WP_124749329.1;Name=WP_124749329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058816.1;locus_tag=D5F94_RS00700;product=ABC transporter permease;protein_id=WP_124749329.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 124412 125030 . - . ID=gene-D5F94_RS00705;Name=D5F94_RS00705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00705;old_locus_tag=D5F94_00705;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 124412 125030 . - 0 ID=cds-D5F94_RS00705;Parent=gene-D5F94_RS00705;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470461.1;locus_tag=D5F94_RS00705;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 125064 125165 . - . ID=gene-D5F94_RS00710;Name=D5F94_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00710;old_locus_tag=D5F94_00710 NZ_QYTD01000001.1 Protein Homology CDS 125064 125165 . - 0 ID=cds-WP_260424799.1;Parent=gene-D5F94_RS00710;Dbxref=GenBank:WP_260424799.1;Name=WP_260424799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810831.1;locus_tag=D5F94_RS00710;product=epipeptide YydF family RiPP;protein_id=WP_260424799.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 125672 126527 . - . ID=gene-D5F94_RS00715;Name=D5F94_RS00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00715;old_locus_tag=D5F94_00715;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 125672 126527 . - 0 ID=cds-D5F94_RS00715;Parent=gene-D5F94_RS00715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204135.1;locus_tag=D5F94_RS00715;product=aminoglycoside 6-adenylyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 126894 127490 . + . ID=gene-D5F94_RS00720;Name=D5F94_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00720;old_locus_tag=D5F94_00720 NZ_QYTD01000001.1 Protein Homology CDS 126894 127490 . + 0 ID=cds-WP_016503307.1;Parent=gene-D5F94_RS00720;Dbxref=GenBank:WP_016503307.1;Name=WP_016503307.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846439.1;locus_tag=D5F94_RS00720;product=uridine kinase family protein;protein_id=WP_016503307.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 127525 128082 . - . ID=gene-D5F94_RS00725;Name=D5F94_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00725;old_locus_tag=D5F94_00725 NZ_QYTD01000001.1 Protein Homology CDS 127525 128082 . - 0 ID=cds-WP_000207508.1;Parent=gene-D5F94_RS00725;Dbxref=GenBank:WP_000207508.1;Name=WP_000207508.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207508.1;locus_tag=D5F94_RS00725;product=histidine phosphatase family protein;protein_id=WP_000207508.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 128119 128454 . - . ID=gene-D5F94_RS00730;Name=D5F94_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00730;old_locus_tag=D5F94_00730 NZ_QYTD01000001.1 Protein Homology CDS 128119 128454 . - 0 ID=cds-WP_000827865.1;Parent=gene-D5F94_RS00730;Dbxref=GenBank:WP_000827865.1;Name=WP_000827865.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827864.1;locus_tag=D5F94_RS00730;product=PadR family transcriptional regulator;protein_id=WP_000827865.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 128977 129465 . - . ID=gene-D5F94_RS00735;Name=D5F94_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00735;old_locus_tag=D5F94_00735 NZ_QYTD01000001.1 Protein Homology CDS 128977 129465 . - 0 ID=cds-WP_000403109.1;Parent=gene-D5F94_RS00735;Dbxref=GenBank:WP_000403109.1;Name=WP_000403109.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403115.1;locus_tag=D5F94_RS00735;product=GNAT family N-acetyltransferase;protein_id=WP_000403109.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 129634 130395 . - . ID=gene-D5F94_RS00740;Name=D5F94_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00740;old_locus_tag=D5F94_00740 NZ_QYTD01000001.1 Protein Homology CDS 129634 130395 . - 0 ID=cds-WP_000838136.1;Parent=gene-D5F94_RS00740;Dbxref=GenBank:WP_000838136.1;Name=WP_000838136.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838141.1;locus_tag=D5F94_RS00740;product=ABC transporter permease;protein_id=WP_000838136.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 130392 131294 . - . ID=gene-D5F94_RS00745;Name=D5F94_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00745;old_locus_tag=D5F94_00745 NZ_QYTD01000001.1 Protein Homology CDS 130392 131294 . - 0 ID=cds-WP_000644459.1;Parent=gene-D5F94_RS00745;Dbxref=GenBank:WP_000644459.1;Name=WP_000644459.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644451.1;locus_tag=D5F94_RS00745;product=ABC transporter ATP-binding protein;protein_id=WP_000644459.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 131291 131497 . - . ID=gene-D5F94_RS00750;Name=D5F94_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00750;old_locus_tag=D5F94_00750 NZ_QYTD01000001.1 Protein Homology CDS 131291 131497 . - 0 ID=cds-WP_001090962.1;Parent=gene-D5F94_RS00750;Dbxref=GenBank:WP_001090962.1;Name=WP_001090962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090962.1;locus_tag=D5F94_RS00750;product=PLDc N-terminal domain-containing protein;protein_id=WP_001090962.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 131499 132575 . - . ID=gene-D5F94_RS00755;Name=D5F94_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00755;old_locus_tag=D5F94_00755 NZ_QYTD01000001.1 Protein Homology CDS 131499 132575 . - 0 ID=cds-WP_000900242.1;Parent=gene-D5F94_RS00755;Dbxref=GenBank:WP_000900242.1;Name=WP_000900242.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900237.1;locus_tag=D5F94_RS00755;product=helix-turn-helix domain-containing protein;protein_id=WP_000900242.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 132599 132808 . - . ID=gene-D5F94_RS10715;Name=D5F94_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10715;old_locus_tag=D5F94_00760 NZ_QYTD01000001.1 Protein Homology CDS 132599 132808 . - 0 ID=cds-WP_086163520.1;Parent=gene-D5F94_RS10715;Dbxref=GenBank:WP_086163520.1;Name=WP_086163520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108133.1;locus_tag=D5F94_RS10715;product=hypothetical protein;protein_id=WP_086163520.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 132824 133438 . - . ID=gene-D5F94_RS00765;Name=D5F94_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00765;old_locus_tag=D5F94_00765 NZ_QYTD01000001.1 Protein Homology CDS 132824 133438 . - 0 ID=cds-WP_016503314.1;Parent=gene-D5F94_RS00765;Dbxref=GenBank:WP_016503314.1;Name=WP_016503314.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035912.1;locus_tag=D5F94_RS00765;product=phosphatase PAP2 family protein;protein_id=WP_016503314.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 133652 133969 . + . ID=gene-D5F94_RS00770;Name=D5F94_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00770;old_locus_tag=D5F94_00770 NZ_QYTD01000001.1 Protein Homology CDS 133652 133969 . + 0 ID=cds-WP_016503315.1;Parent=gene-D5F94_RS00770;Dbxref=GenBank:WP_016503315.1;Name=WP_016503315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503315.1;locus_tag=D5F94_RS00770;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_016503315.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 133966 134526 . + . ID=gene-D5F94_RS00775;Name=D5F94_RS00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00775;old_locus_tag=D5F94_00775;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 133966 134526 . + 0 ID=cds-D5F94_RS00775;Parent=gene-D5F94_RS00775;Note=internal stop;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223122.1;locus_tag=D5F94_RS00775;product=LOG family protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 134831 135694 . + . ID=gene-D5F94_RS00780;Name=D5F94_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00780;old_locus_tag=D5F94_00780 NZ_QYTD01000001.1 Protein Homology CDS 134831 135694 . + 0 ID=cds-WP_016503317.1;Parent=gene-D5F94_RS00780;Dbxref=GenBank:WP_016503317.1;Name=WP_016503317.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071061.1;locus_tag=D5F94_RS00780;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016503317.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 135851 136153 . - . ID=gene-D5F94_RS00785;Name=D5F94_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00785;old_locus_tag=D5F94_00785 NZ_QYTD01000001.1 Protein Homology CDS 135851 136153 . - 0 ID=cds-WP_000162433.1;Parent=gene-D5F94_RS00785;Dbxref=GenBank:WP_000162433.1;Name=WP_000162433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162432.1;locus_tag=D5F94_RS00785;product=rhodanese-like domain-containing protein;protein_id=WP_000162433.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 136326 137093 . - . ID=gene-D5F94_RS00790;Name=cfb;gbkey=Gene;gene=cfb;gene_biotype=protein_coding;locus_tag=D5F94_RS00790;old_locus_tag=D5F94_00790 NZ_QYTD01000001.1 Protein Homology CDS 136326 137093 . - 0 ID=cds-WP_001101132.1;Parent=gene-D5F94_RS00790;Dbxref=GenBank:WP_001101132.1;Name=WP_001101132.1;gbkey=CDS;gene=cfb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101136.1;locus_tag=D5F94_RS00790;product=CAMP factor pore-forming toxin Cfb-I;protein_id=WP_001101132.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 137862 138401 . + . ID=gene-D5F94_RS00800;Name=D5F94_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00800;old_locus_tag=D5F94_00800 NZ_QYTD01000001.1 Protein Homology CDS 137862 138401 . + 0 ID=cds-WP_000684245.1;Parent=gene-D5F94_RS00800;Dbxref=GenBank:WP_000684245.1;Name=WP_000684245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647778.1;locus_tag=D5F94_RS00800;product=DNA topology modulation protein;protein_id=WP_000684245.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 138602 139687 . + . ID=gene-D5F94_RS00805;Name=D5F94_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00805;old_locus_tag=D5F94_00805 NZ_QYTD01000001.1 Protein Homology CDS 138602 139687 . + 0 ID=cds-WP_000210838.1;Parent=gene-D5F94_RS00805;Dbxref=GenBank:WP_000210838.1;Name=WP_000210838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644856.1;locus_tag=D5F94_RS00805;product=iron-containing alcohol dehydrogenase family protein;protein_id=WP_000210838.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 139852 140559 . - . ID=gene-D5F94_RS00810;Name=D5F94_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00810;old_locus_tag=D5F94_00810 NZ_QYTD01000001.1 Protein Homology CDS 139852 140559 . - 0 ID=cds-WP_000227144.1;Parent=gene-D5F94_RS00810;Dbxref=GenBank:WP_000227144.1;Name=WP_000227144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227145.1;locus_tag=D5F94_RS00810;product=DUF1003 domain-containing protein;protein_id=WP_000227144.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 140906 142750 . - . ID=gene-D5F94_RS00815;Name=D5F94_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00815;old_locus_tag=D5F94_00815 NZ_QYTD01000001.1 Protein Homology CDS 140906 142750 . - 0 ID=cds-WP_124749330.1;Parent=gene-D5F94_RS00815;Dbxref=GenBank:WP_124749330.1;Name=WP_124749330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032994.1;locus_tag=D5F94_RS00815;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_124749330.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 142795 145032 . - . ID=gene-D5F94_RS00820;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=D5F94_RS00820;old_locus_tag=D5F94_00820 NZ_QYTD01000001.1 Protein Homology CDS 142795 145032 . - 0 ID=cds-WP_000241559.1;Parent=gene-D5F94_RS00820;Dbxref=GenBank:WP_000241559.1;Name=WP_000241559.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019806054.1;locus_tag=D5F94_RS00820;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000241559.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 145402 145725 . - . ID=gene-D5F94_RS00825;Name=D5F94_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00825;old_locus_tag=D5F94_00825 NZ_QYTD01000001.1 Protein Homology CDS 145402 145725 . - 0 ID=cds-WP_000610952.1;Parent=gene-D5F94_RS00825;Dbxref=GenBank:WP_000610952.1;Name=WP_000610952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610952.1;locus_tag=D5F94_RS00825;product=AzlD domain-containing protein;protein_id=WP_000610952.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 145715 146408 . - . ID=gene-D5F94_RS00830;Name=D5F94_RS00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS00830;old_locus_tag=D5F94_00830;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 145715 146408 . - 0 ID=cds-D5F94_RS00830;Parent=gene-D5F94_RS00830;Note=frameshifted;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410672.1;locus_tag=D5F94_RS00830;product=AzlC family ABC transporter permease;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 146731 151446 . + . ID=gene-D5F94_RS00840;Name=D5F94_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00840;old_locus_tag=D5F94_00840 NZ_QYTD01000001.1 Protein Homology CDS 146731 151446 . + 0 ID=cds-WP_086163522.1;Parent=gene-D5F94_RS00840;Dbxref=GenBank:WP_086163522.1;Name=WP_086163522.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645139.1;locus_tag=D5F94_RS00840;product=S8 family serine peptidase;protein_id=WP_086163522.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 151679 152365 . + . ID=gene-D5F94_RS00845;Name=D5F94_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00845;old_locus_tag=D5F94_00845 NZ_QYTD01000001.1 Protein Homology CDS 151679 152365 . + 0 ID=cds-WP_000161338.1;Parent=gene-D5F94_RS00845;Dbxref=GenBank:WP_000161338.1;Name=WP_000161338.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161341.1;locus_tag=D5F94_RS00845;product=response regulator transcription factor;protein_id=WP_000161338.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 152362 153750 . + . ID=gene-D5F94_RS00850;Name=D5F94_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00850;old_locus_tag=D5F94_00850 NZ_QYTD01000001.1 Protein Homology CDS 152362 153750 . + 0 ID=cds-WP_000730416.1;Parent=gene-D5F94_RS00850;Dbxref=GenBank:WP_000730416.1;Name=WP_000730416.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730412.1;locus_tag=D5F94_RS00850;product=sensor histidine kinase;protein_id=WP_000730416.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 153843 154451 . + . ID=gene-D5F94_RS00855;Name=D5F94_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00855;old_locus_tag=D5F94_00855 NZ_QYTD01000001.1 Protein Homology CDS 153843 154451 . + 0 ID=cds-WP_124749332.1;Parent=gene-D5F94_RS00855;Dbxref=GenBank:WP_124749332.1;Name=WP_124749332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000903267.1;locus_tag=D5F94_RS00855;product=chromosome assembly protein;protein_id=WP_124749332.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 154541 157042 . - . ID=gene-D5F94_RS00860;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=D5F94_RS00860;old_locus_tag=D5F94_00860 NZ_QYTD01000001.1 Protein Homology CDS 154541 157042 . - 0 ID=cds-WP_086163523.1;Parent=gene-D5F94_RS00860;Dbxref=GenBank:WP_086163523.1;Name=WP_086163523.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639013.1;locus_tag=D5F94_RS00860;product=leucine--tRNA ligase;protein_id=WP_086163523.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 157419 158666 . + . ID=gene-D5F94_RS00865;Name=D5F94_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00865;old_locus_tag=D5F94_00865 NZ_QYTD01000001.1 Protein Homology CDS 157419 158666 . + 0 ID=cds-WP_000074728.1;Parent=gene-D5F94_RS00865;Dbxref=GenBank:WP_000074728.1;Name=WP_000074728.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481321.1;locus_tag=D5F94_RS00865;product=MFS transporter;protein_id=WP_000074728.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 158709 159554 . - . ID=gene-D5F94_RS00870;Name=D5F94_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00870;old_locus_tag=D5F94_00870 NZ_QYTD01000001.1 Protein Homology CDS 158709 159554 . - 0 ID=cds-WP_016503332.1;Parent=gene-D5F94_RS00870;Dbxref=GenBank:WP_016503332.1;Name=WP_016503332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953624.1;locus_tag=D5F94_RS00870;product=patatin-like phospholipase family protein;protein_id=WP_016503332.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 159692 160231 . - . ID=gene-D5F94_RS00875;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=D5F94_RS00875;old_locus_tag=D5F94_00875 NZ_QYTD01000001.1 Protein Homology CDS 159692 160231 . - 0 ID=cds-WP_000887149.1;Parent=gene-D5F94_RS00875;Dbxref=GenBank:WP_000887149.1;Name=WP_000887149.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887149.1;locus_tag=D5F94_RS00875;product=transcription termination/antitermination protein NusG;protein_id=WP_000887149.1;transl_table=11 NZ_QYTD01000001.1 RefSeq pseudogene 160437 162874 . - . ID=gene-D5F94_RS10790;Name=D5F94_RS10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10790;old_locus_tag=D5F94_00880;pseudo=true NZ_QYTD01000001.1 Protein Homology CDS 160437 162874 . - 0 ID=cds-D5F94_RS10790;Parent=gene-D5F94_RS10790;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063276.1;locus_tag=D5F94_RS10790;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 163186 163359 . - . ID=gene-D5F94_RS00885;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=D5F94_RS00885;old_locus_tag=D5F94_00885 NZ_QYTD01000001.1 Protein Homology CDS 163186 163359 . - 0 ID=cds-WP_000497678.1;Parent=gene-D5F94_RS00885;Dbxref=GenBank:WP_000497678.1;Name=WP_000497678.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497677.1;locus_tag=D5F94_RS00885;product=preprotein translocase subunit SecE;protein_id=WP_000497678.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 163395 163547 . - . ID=gene-D5F94_RS00890;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F94_RS00890;old_locus_tag=D5F94_00890 NZ_QYTD01000001.1 Protein Homology CDS 163395 163547 . - 0 ID=cds-WP_000057521.1;Parent=gene-D5F94_RS00890;Dbxref=GenBank:WP_000057521.1;Name=WP_000057521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912025.1;locus_tag=D5F94_RS00890;product=50S ribosomal protein L33;protein_id=WP_000057521.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 163596 165917 . - . ID=gene-D5F94_RS00895;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=D5F94_RS00895;old_locus_tag=D5F94_00895 NZ_QYTD01000001.1 Protein Homology CDS 163596 165917 . - 0 ID=cds-WP_000764814.1;Parent=gene-D5F94_RS00895;Dbxref=GenBank:WP_000764814.1;Name=WP_000764814.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764805.1;locus_tag=D5F94_RS00895;product=penicillin-binding protein PBP2A;protein_id=WP_000764814.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 165961 166845 . + . ID=gene-D5F94_RS00900;Name=D5F94_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00900;old_locus_tag=D5F94_00900 NZ_QYTD01000001.1 Protein Homology CDS 165961 166845 . + 0 ID=cds-WP_000010477.1;Parent=gene-D5F94_RS00900;Dbxref=GenBank:WP_000010477.1;Name=WP_000010477.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645974.1;locus_tag=D5F94_RS00900;product=RluA family pseudouridine synthase;protein_id=WP_000010477.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 166870 168510 . - . ID=gene-D5F94_RS00905;Name=D5F94_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00905;old_locus_tag=D5F94_00905 NZ_QYTD01000001.1 Protein Homology CDS 166870 168510 . - 0 ID=cds-WP_000459240.1;Parent=gene-D5F94_RS00905;Dbxref=GenBank:WP_000459240.1;Name=WP_000459240.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459235.1;locus_tag=D5F94_RS00905;product=zinc ribbon domain-containing protein;protein_id=WP_000459240.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 168680 169891 . - . ID=gene-D5F94_RS00910;Name=D5F94_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00910;old_locus_tag=D5F94_00910 NZ_QYTD01000001.1 Protein Homology CDS 168680 169891 . - 0 ID=cds-WP_000077191.1;Parent=gene-D5F94_RS00910;Dbxref=GenBank:WP_000077191.1;Name=WP_000077191.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739798.1;locus_tag=D5F94_RS00910;product=phosphopentomutase;protein_id=WP_000077191.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 169958 170629 . - . ID=gene-D5F94_RS00915;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=D5F94_RS00915;old_locus_tag=D5F94_00915 NZ_QYTD01000001.1 Protein Homology CDS 169958 170629 . - 0 ID=cds-WP_000453154.1;Parent=gene-D5F94_RS00915;Dbxref=GenBank:WP_000453154.1;Name=WP_000453154.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453153.1;locus_tag=D5F94_RS00915;product=deoxyribose-phosphate aldolase;protein_id=WP_000453154.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 170659 171861 . - . ID=gene-D5F94_RS00920;Name=D5F94_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00920;old_locus_tag=D5F94_00920 NZ_QYTD01000001.1 Protein Homology CDS 170659 171861 . - 0 ID=cds-WP_001159688.1;Parent=gene-D5F94_RS00920;Dbxref=GenBank:WP_001159688.1;Name=WP_001159688.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058832.1;locus_tag=D5F94_RS00920;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_001159688.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 171882 172661 . - . ID=gene-D5F94_RS00925;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=D5F94_RS00925;old_locus_tag=D5F94_00925 NZ_QYTD01000001.1 Protein Homology CDS 171882 172661 . - 0 ID=cds-WP_001182060.1;Parent=gene-D5F94_RS00925;Dbxref=GenBank:WP_001182060.1;Name=WP_001182060.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=udp;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184939.1;locus_tag=D5F94_RS00925;product=uridine phosphorylase;protein_id=WP_001182060.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 172820 173557 . + . ID=gene-D5F94_RS00930;Name=D5F94_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00930;old_locus_tag=D5F94_00930 NZ_QYTD01000001.1 Protein Homology CDS 172820 173557 . + 0 ID=cds-WP_001125582.1;Parent=gene-D5F94_RS00930;Dbxref=GenBank:WP_001125582.1;Name=WP_001125582.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644031.1;locus_tag=D5F94_RS00930;product=GntR family transcriptional regulator;protein_id=WP_001125582.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 173570 173932 . + . ID=gene-D5F94_RS00935;Name=D5F94_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00935;old_locus_tag=D5F94_00935 NZ_QYTD01000001.1 Protein Homology CDS 173570 173932 . + 0 ID=cds-WP_001181223.1;Parent=gene-D5F94_RS00935;Dbxref=GenBank:WP_001181223.1;Name=WP_001181223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181232.1;locus_tag=D5F94_RS00935;product=hypothetical protein;protein_id=WP_001181223.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 173967 175589 . - . ID=gene-D5F94_RS00940;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D5F94_RS00940;old_locus_tag=D5F94_00940 NZ_QYTD01000001.1 Protein Homology CDS 173967 175589 . - 0 ID=cds-WP_124749333.1;Parent=gene-D5F94_RS00940;Dbxref=GenBank:WP_124749333.1;Name=WP_124749333.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029975.1;locus_tag=D5F94_RS00940;product=chaperonin GroEL;protein_id=WP_124749333.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 175685 175969 . - . ID=gene-D5F94_RS00945;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=D5F94_RS00945;old_locus_tag=D5F94_00945 NZ_QYTD01000001.1 Protein Homology CDS 175685 175969 . - 0 ID=cds-WP_000917302.1;Parent=gene-D5F94_RS00945;Dbxref=GenBank:WP_000917302.1;Name=WP_000917302.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645309.1;locus_tag=D5F94_RS00945;product=co-chaperone GroES;protein_id=WP_000917302.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 176144 176947 . - . ID=gene-D5F94_RS00950;Name=D5F94_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00950;old_locus_tag=D5F94_00950 NZ_QYTD01000001.1 Protein Homology CDS 176144 176947 . - 0 ID=cds-WP_000054435.1;Parent=gene-D5F94_RS00950;Dbxref=GenBank:WP_000054435.1;Name=WP_000054435.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054433.1;locus_tag=D5F94_RS00950;product=ABC transporter ATP-binding protein;protein_id=WP_000054435.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 176952 177848 . - . ID=gene-D5F94_RS10600;Name=D5F94_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10600 NZ_QYTD01000001.1 Protein Homology CDS 176952 177848 . - 0 ID=cds-WP_000884162.1;Parent=gene-D5F94_RS10600;Dbxref=GenBank:WP_000884162.1;Name=WP_000884162.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884158.1;locus_tag=D5F94_RS10600;product=ABC transporter permease;protein_id=WP_000884162.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 177864 178826 . - . ID=gene-D5F94_RS10605;Name=D5F94_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10605 NZ_QYTD01000001.1 Protein Homology CDS 177864 178826 . - 0 ID=cds-WP_000724423.1;Parent=gene-D5F94_RS10605;Dbxref=GenBank:WP_000724423.1;Name=WP_000724423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058834.1;locus_tag=D5F94_RS10605;product=ABC transporter substrate-binding protein;protein_id=WP_000724423.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 179291 180088 . - . ID=gene-D5F94_RS00960;Name=D5F94_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00960;old_locus_tag=D5F94_00960 NZ_QYTD01000001.1 Protein Homology CDS 179291 180088 . - 0 ID=cds-WP_016503337.1;Parent=gene-D5F94_RS00960;Dbxref=GenBank:WP_016503337.1;Name=WP_016503337.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251911.1;locus_tag=D5F94_RS00960;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016503337.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 180274 181134 . + . ID=gene-D5F94_RS00965;Name=D5F94_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00965;old_locus_tag=D5F94_00965 NZ_QYTD01000001.1 Protein Homology CDS 180274 181134 . + 0 ID=cds-WP_016503338.1;Parent=gene-D5F94_RS00965;Dbxref=GenBank:WP_016503338.1;Name=WP_016503338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767712.1;locus_tag=D5F94_RS00965;product=VOC family protein;protein_id=WP_016503338.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 181177 181908 . + . ID=gene-D5F94_RS00970;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D5F94_RS00970;old_locus_tag=D5F94_00970 NZ_QYTD01000001.1 Protein Homology CDS 181177 181908 . + 0 ID=cds-WP_086163527.1;Parent=gene-D5F94_RS00970;Dbxref=GenBank:WP_086163527.1;Name=WP_086163527.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632340.1;locus_tag=D5F94_RS00970;product=peroxide stress protein YaaA;protein_id=WP_086163527.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 182265 182882 . - . ID=gene-D5F94_RS00975;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=D5F94_RS00975;old_locus_tag=D5F94_00975 NZ_QYTD01000001.1 Protein Homology CDS 182265 182882 . - 0 ID=cds-WP_001287939.1;Parent=gene-D5F94_RS00975;Dbxref=GenBank:WP_001287939.1;Name=WP_001287939.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287938.1;locus_tag=D5F94_RS00975;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_001287939.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 182955 183446 . - . ID=gene-D5F94_RS00980;Name=D5F94_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00980;old_locus_tag=D5F94_00980 NZ_QYTD01000001.1 Protein Homology CDS 182955 183446 . - 0 ID=cds-WP_000776873.1;Parent=gene-D5F94_RS00980;Dbxref=GenBank:WP_000776873.1;Name=WP_000776873.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776873.1;locus_tag=D5F94_RS00980;product=GNAT family N-acetyltransferase;protein_id=WP_000776873.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 183455 184387 . - . ID=gene-D5F94_RS00985;Name=D5F94_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00985;old_locus_tag=D5F94_00985 NZ_QYTD01000001.1 Protein Homology CDS 183455 184387 . - 0 ID=cds-WP_016503340.1;Parent=gene-D5F94_RS00985;Dbxref=GenBank:WP_016503340.1;Name=WP_016503340.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644670.1;locus_tag=D5F94_RS00985;product=Gfo/Idh/MocA family protein;protein_id=WP_016503340.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 184400 184543 . - . ID=gene-D5F94_RS00990;Name=D5F94_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS00990;old_locus_tag=D5F94_00990 NZ_QYTD01000001.1 Protein Homology CDS 184400 184543 . - 0 ID=cds-WP_000521645.1;Parent=gene-D5F94_RS00990;Dbxref=GenBank:WP_000521645.1;Name=WP_000521645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521646.1;locus_tag=D5F94_RS00990;product=hypothetical protein;protein_id=WP_000521645.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 184618 186816 . - . ID=gene-D5F94_RS00995;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=D5F94_RS00995;old_locus_tag=D5F94_00995 NZ_QYTD01000001.1 Protein Homology CDS 184618 186816 . - 0 ID=cds-WP_000989502.1;Parent=gene-D5F94_RS00995;Dbxref=GenBank:WP_000989502.1;Name=WP_000989502.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481337.1;locus_tag=D5F94_RS00995;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000989502.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 186915 188456 . - . ID=gene-D5F94_RS01000;Name=D5F94_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01000;old_locus_tag=D5F94_01000 NZ_QYTD01000001.1 Protein Homology CDS 186915 188456 . - 0 ID=cds-WP_016503341.1;Parent=gene-D5F94_RS01000;Dbxref=GenBank:WP_016503341.1;Name=WP_016503341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230047.1;locus_tag=D5F94_RS01000;product=Competence-induced protein Ccs4;protein_id=WP_016503341.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 188502 188624 . - . ID=gene-D5F94_RS10610;Name=D5F94_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10610;old_locus_tag=D5F94_01005 NZ_QYTD01000001.1 Protein Homology CDS 188502 188624 . - 0 ID=cds-WP_001285712.1;Parent=gene-D5F94_RS10610;Dbxref=GenBank:WP_001285712.1;Name=WP_001285712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285712.1;locus_tag=D5F94_RS10610;product=hypothetical protein;protein_id=WP_001285712.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 188705 189022 . - . ID=gene-D5F94_RS01010;Name=D5F94_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01010;old_locus_tag=D5F94_01010 NZ_QYTD01000001.1 Protein Homology CDS 188705 189022 . - 0 ID=cds-WP_000940932.1;Parent=gene-D5F94_RS01010;Dbxref=GenBank:WP_000940932.1;Name=WP_000940932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912065.1;locus_tag=D5F94_RS01010;product=DUF1292 domain-containing protein;protein_id=WP_000940932.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 189048 189467 . - . ID=gene-D5F94_RS01015;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=D5F94_RS01015;old_locus_tag=D5F94_01015 NZ_QYTD01000001.1 Protein Homology CDS 189048 189467 . - 0 ID=cds-WP_001222109.1;Parent=gene-D5F94_RS01015;Dbxref=GenBank:WP_001222109.1;Name=WP_001222109.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090938.1;locus_tag=D5F94_RS01015;product=Holliday junction resolvase RuvX;protein_id=WP_001222109.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 189467 189733 . - . ID=gene-D5F94_RS01020;Name=D5F94_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01020;old_locus_tag=D5F94_01020 NZ_QYTD01000001.1 Protein Homology CDS 189467 189733 . - 0 ID=cds-WP_000507056.1;Parent=gene-D5F94_RS01020;Dbxref=GenBank:WP_000507056.1;Name=WP_000507056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738453.1;locus_tag=D5F94_RS01020;product=IreB family regulatory phosphoprotein;protein_id=WP_000507056.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 189935 190333 . - . ID=gene-D5F94_RS01025;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=D5F94_RS01025;old_locus_tag=D5F94_01025 NZ_QYTD01000001.1 Protein Homology CDS 189935 190333 . - 0 ID=cds-WP_000591161.1;Parent=gene-D5F94_RS01025;Dbxref=GenBank:WP_000591161.1;Name=WP_000591161.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768833.1;locus_tag=D5F94_RS01025;product=transcriptional regulator Spx;protein_id=WP_000591161.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 190549 191688 . - . ID=gene-D5F94_RS01030;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=D5F94_RS01030;old_locus_tag=D5F94_01030 NZ_QYTD01000001.1 Protein Homology CDS 190549 191688 . - 0 ID=cds-WP_124749334.1;Parent=gene-D5F94_RS01030;Dbxref=GenBank:WP_124749334.1;Name=WP_124749334.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085741.1;locus_tag=D5F94_RS01030;product=recombinase RecA;protein_id=WP_124749334.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 191762 193021 . - . ID=gene-D5F94_RS01035;Name=D5F94_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01035;old_locus_tag=D5F94_01035 NZ_QYTD01000001.1 Protein Homology CDS 191762 193021 . - 0 ID=cds-WP_016503342.1;Parent=gene-D5F94_RS01035;Dbxref=GenBank:WP_016503342.1;Name=WP_016503342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503342.1;locus_tag=D5F94_RS01035;product=competence/damage-inducible protein A;protein_id=WP_016503342.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 193110 193661 . - . ID=gene-D5F94_RS01040;Name=D5F94_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01040;old_locus_tag=D5F94_01040 NZ_QYTD01000001.1 Protein Homology CDS 193110 193661 . - 0 ID=cds-WP_016503343.1;Parent=gene-D5F94_RS01040;Dbxref=GenBank:WP_016503343.1;Name=WP_016503343.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632344.1;locus_tag=D5F94_RS01040;product=DNA-3-methyladenine glycosylase I;protein_id=WP_016503343.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 193684 194274 . - . ID=gene-D5F94_RS01045;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=D5F94_RS01045;old_locus_tag=D5F94_01045 NZ_QYTD01000001.1 Protein Homology CDS 193684 194274 . - 0 ID=cds-WP_000272490.1;Parent=gene-D5F94_RS01045;Dbxref=GenBank:WP_000272490.1;Name=WP_000272490.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768484.1;locus_tag=D5F94_RS01045;product=Holliday junction branch migration protein RuvA;protein_id=WP_000272490.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 194276 195508 . - . ID=gene-D5F94_RS01050;Name=D5F94_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01050;old_locus_tag=D5F94_01050 NZ_QYTD01000001.1 Protein Homology CDS 194276 195508 . - 0 ID=cds-WP_000657472.1;Parent=gene-D5F94_RS01050;Dbxref=GenBank:WP_000657472.1;Name=WP_000657472.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657477.1;locus_tag=D5F94_RS01050;product=MDR family MFS transporter;protein_id=WP_000657472.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 195540 197513 . - . ID=gene-D5F94_RS01055;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=D5F94_RS01055;old_locus_tag=D5F94_01055 NZ_QYTD01000001.1 Protein Homology CDS 195540 197513 . - 0 ID=cds-WP_180383579.1;Parent=gene-D5F94_RS01055;Dbxref=GenBank:WP_180383579.1;Name=WP_180383579.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262396.1;locus_tag=D5F94_RS01055;product=DNA mismatch repair endonuclease MutL;protein_id=WP_180383579.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 197739 197942 . + . ID=gene-D5F94_RS01065;Name=D5F94_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01065;old_locus_tag=D5F94_01065 NZ_QYTD01000001.1 Protein Homology CDS 197739 197942 . + 0 ID=cds-WP_000191849.1;Parent=gene-D5F94_RS01065;Dbxref=GenBank:WP_000191849.1;Name=WP_000191849.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191849.1;locus_tag=D5F94_RS01065;product=cold-shock protein;protein_id=WP_000191849.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 197999 200575 . - . ID=gene-D5F94_RS01070;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=D5F94_RS01070;old_locus_tag=D5F94_01070 NZ_QYTD01000001.1 Protein Homology CDS 197999 200575 . - 0 ID=cds-WP_124749335.1;Parent=gene-D5F94_RS01070;Dbxref=GenBank:WP_124749335.1;Name=WP_124749335.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649199.1;locus_tag=D5F94_RS01070;product=DNA mismatch repair protein MutS;protein_id=WP_124749335.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 200632 201069 . - . ID=gene-D5F94_RS01075;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=D5F94_RS01075;old_locus_tag=D5F94_01075 NZ_QYTD01000001.1 Protein Homology CDS 200632 201069 . - 0 ID=cds-WP_001033152.1;Parent=gene-D5F94_RS01075;Dbxref=GenBank:WP_001033152.1;Name=WP_001033152.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058838.1;locus_tag=D5F94_RS01075;product=arginine repressor;protein_id=WP_001033152.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 201291 202982 . + . ID=gene-D5F94_RS01080;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=D5F94_RS01080;old_locus_tag=D5F94_01080 NZ_QYTD01000001.1 Protein Homology CDS 201291 202982 . + 0 ID=cds-WP_000379864.1;Parent=gene-D5F94_RS01080;Dbxref=GenBank:WP_000379864.1;Name=WP_000379864.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632348.1;locus_tag=D5F94_RS01080;product=arginine--tRNA ligase;protein_id=WP_000379864.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 203070 203378 . + . ID=gene-D5F94_RS01085;Name=D5F94_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01085;old_locus_tag=D5F94_01085 NZ_QYTD01000001.1 Protein Homology CDS 203070 203378 . + 0 ID=cds-WP_001138859.1;Parent=gene-D5F94_RS01085;Dbxref=GenBank:WP_001138859.1;Name=WP_001138859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889238.1;locus_tag=D5F94_RS01085;product=bacteriocin immunity protein;protein_id=WP_001138859.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 203405 204277 . - . ID=gene-D5F94_RS01090;Name=D5F94_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01090;old_locus_tag=D5F94_01090 NZ_QYTD01000001.1 Protein Homology CDS 203405 204277 . - 0 ID=cds-WP_000915478.1;Parent=gene-D5F94_RS01090;Dbxref=GenBank:WP_000915478.1;Name=WP_000915478.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481344.1;locus_tag=D5F94_RS01090;product=YitT family protein;protein_id=WP_000915478.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 204385 205329 . - . ID=gene-D5F94_RS01095;Name=D5F94_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01095;old_locus_tag=D5F94_01095 NZ_QYTD01000001.1 Protein Homology CDS 204385 205329 . - 0 ID=cds-WP_000857770.1;Parent=gene-D5F94_RS01095;Dbxref=GenBank:WP_000857770.1;Name=WP_000857770.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646408.1;locus_tag=D5F94_RS01095;product=YitT family protein;protein_id=WP_000857770.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 205319 207070 . - . ID=gene-D5F94_RS01100;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=D5F94_RS01100;old_locus_tag=D5F94_01100 NZ_QYTD01000001.1 Protein Homology CDS 205319 207070 . - 0 ID=cds-WP_000830938.1;Parent=gene-D5F94_RS01100;Dbxref=GenBank:WP_000830938.1;Name=WP_000830938.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830932.1;locus_tag=D5F94_RS01100;product=aspartate--tRNA ligase;protein_id=WP_000830938.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 207163 208443 . - . ID=gene-D5F94_RS01105;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=D5F94_RS01105;old_locus_tag=D5F94_01105 NZ_QYTD01000001.1 Protein Homology CDS 207163 208443 . - 0 ID=cds-WP_000775906.1;Parent=gene-D5F94_RS01105;Dbxref=GenBank:WP_000775906.1;Name=WP_000775906.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775906.1;locus_tag=D5F94_RS01105;product=histidine--tRNA ligase;protein_id=WP_000775906.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 208663 208845 . + . ID=gene-D5F94_RS01110;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=D5F94_RS01110;old_locus_tag=D5F94_01110 NZ_QYTD01000001.1 Protein Homology CDS 208663 208845 . + 0 ID=cds-WP_000290414.1;Parent=gene-D5F94_RS01110;Dbxref=GenBank:WP_000290414.1;Name=WP_000290414.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380522.1;locus_tag=D5F94_RS01110;product=50S ribosomal protein L32;protein_id=WP_000290414.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 208861 209010 . + . ID=gene-D5F94_RS01115;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F94_RS01115;old_locus_tag=D5F94_01115 NZ_QYTD01000001.1 Protein Homology CDS 208861 209010 . + 0 ID=cds-WP_001265622.1;Parent=gene-D5F94_RS01115;Dbxref=GenBank:WP_001265622.1;Name=WP_001265622.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=D5F94_RS01115;product=50S ribosomal protein L33;protein_id=WP_001265622.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 209257 209928 . + . ID=gene-D5F94_RS01120;Name=D5F94_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01120;old_locus_tag=D5F94_01120 NZ_QYTD01000001.1 Protein Homology CDS 209257 209928 . + 0 ID=cds-WP_016481351.1;Parent=gene-D5F94_RS01120;Dbxref=GenBank:WP_016481351.1;Name=WP_016481351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186297.1;locus_tag=D5F94_RS01120;product=PepSY domain-containing protein;protein_id=WP_016481351.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 210013 210684 . + . ID=gene-D5F94_RS01125;Name=D5F94_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01125;old_locus_tag=D5F94_01125 NZ_QYTD01000001.1 Protein Homology CDS 210013 210684 . + 0 ID=cds-WP_000699615.1;Parent=gene-D5F94_RS01125;Dbxref=GenBank:WP_000699615.1;Name=WP_000699615.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643515.1;locus_tag=D5F94_RS01125;product=response regulator transcription factor;protein_id=WP_000699615.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 210668 212032 . + . ID=gene-D5F94_RS01130;Name=D5F94_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01130;old_locus_tag=D5F94_01130 NZ_QYTD01000001.1 Protein Homology CDS 210668 212032 . + 0 ID=cds-WP_000898849.1;Parent=gene-D5F94_RS01130;Dbxref=GenBank:WP_000898849.1;Name=WP_000898849.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000898851.1;locus_tag=D5F94_RS01130;product=sensor histidine kinase;protein_id=WP_000898849.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 212140 213693 . - . ID=gene-D5F94_RS01135;Name=D5F94_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01135;old_locus_tag=D5F94_01135 NZ_QYTD01000001.1 Protein Homology CDS 212140 213693 . - 0 ID=cds-WP_016503348.1;Parent=gene-D5F94_RS01135;Dbxref=GenBank:WP_016503348.1;Name=WP_016503348.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114291.1;locus_tag=D5F94_RS01135;product=YfcC family protein;protein_id=WP_016503348.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 213787 214713 . - . ID=gene-D5F94_RS01140;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=D5F94_RS01140;old_locus_tag=D5F94_01140 NZ_QYTD01000001.1 Protein Homology CDS 213787 214713 . - 0 ID=cds-WP_016503349.1;Parent=gene-D5F94_RS01140;Dbxref=GenBank:WP_016503349.1;Name=WP_016503349.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503349.1;locus_tag=D5F94_RS01140;product=carbamate kinase;protein_id=WP_016503349.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 214725 215723 . - . ID=gene-D5F94_RS01145;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D5F94_RS01145;old_locus_tag=D5F94_01145 NZ_QYTD01000001.1 Protein Homology CDS 214725 215723 . - 0 ID=cds-WP_000793624.1;Parent=gene-D5F94_RS01145;Dbxref=GenBank:WP_000793624.1;Name=WP_000793624.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045350.1;locus_tag=D5F94_RS01145;product=ornithine carbamoyltransferase;protein_id=WP_000793624.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 215826 217121 . + . ID=gene-D5F94_RS01150;Name=D5F94_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01150;old_locus_tag=D5F94_01150 NZ_QYTD01000001.1 Protein Homology CDS 215826 217121 . + 0 ID=cds-WP_000884296.1;Parent=gene-D5F94_RS01150;Dbxref=GenBank:WP_000884296.1;Name=WP_000884296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884289.1;locus_tag=D5F94_RS01150;product=ATP-binding protein;protein_id=WP_000884296.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 217118 217951 . + . ID=gene-D5F94_RS01155;Name=D5F94_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01155;old_locus_tag=D5F94_01155 NZ_QYTD01000001.1 Protein Homology CDS 217118 217951 . + 0 ID=cds-WP_000675242.1;Parent=gene-D5F94_RS01155;Dbxref=GenBank:WP_000675242.1;Name=WP_000675242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675243.1;locus_tag=D5F94_RS01155;product=DNA-binding domain-containing protein;protein_id=WP_000675242.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 218173 218895 . + . ID=gene-D5F94_RS01160;Name=D5F94_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01160;old_locus_tag=D5F94_01160 NZ_QYTD01000001.1 Protein Homology CDS 218173 218895 . + 0 ID=cds-WP_000622721.1;Parent=gene-D5F94_RS01160;Dbxref=GenBank:WP_000622721.1;Name=WP_000622721.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767600.1;locus_tag=D5F94_RS01160;product=ABC transporter ATP-binding protein;protein_id=WP_000622721.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 218898 220412 . + . ID=gene-D5F94_RS01165;Name=D5F94_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01165;old_locus_tag=D5F94_01165 NZ_QYTD01000001.1 Protein Homology CDS 218898 220412 . + 0 ID=cds-WP_016503350.1;Parent=gene-D5F94_RS01165;Dbxref=GenBank:WP_016503350.1;Name=WP_016503350.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019319700.1;locus_tag=D5F94_RS01165;product=ABC transporter permease/substrate-binding protein;protein_id=WP_016503350.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 220491 223031 . - . ID=gene-D5F94_RS01170;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=D5F94_RS01170;old_locus_tag=D5F94_01170 NZ_QYTD01000001.1 Protein Homology CDS 220491 223031 . - 0 ID=cds-WP_185690685.1;Parent=gene-D5F94_RS01170;Dbxref=GenBank:WP_185690685.1;Name=WP_185690685.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733247.1;locus_tag=D5F94_RS01170;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_185690685.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 223015 223758 . - . ID=gene-D5F94_RS01175;Name=D5F94_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01175;old_locus_tag=D5F94_01175 NZ_QYTD01000001.1 Protein Homology CDS 223015 223758 . - 0 ID=cds-WP_000138567.1;Parent=gene-D5F94_RS01175;Dbxref=GenBank:WP_000138567.1;Name=WP_000138567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138569.1;locus_tag=D5F94_RS01175;product=alpha/beta fold hydrolase;protein_id=WP_000138567.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 223892 224248 . - . ID=gene-D5F94_RS01180;Name=D5F94_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01180;old_locus_tag=D5F94_01180 NZ_QYTD01000001.1 Protein Homology CDS 223892 224248 . - 0 ID=cds-WP_000105931.1;Parent=gene-D5F94_RS01180;Dbxref=GenBank:WP_000105931.1;Name=WP_000105931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105940.1;locus_tag=D5F94_RS01180;product=DUF1304 domain-containing protein;protein_id=WP_000105931.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 224315 226633 . - . ID=gene-D5F94_RS01185;Name=D5F94_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01185;old_locus_tag=D5F94_01185 NZ_QYTD01000001.1 Protein Homology CDS 224315 226633 . - 0 ID=cds-WP_016503353.1;Parent=gene-D5F94_RS01185;Dbxref=GenBank:WP_016503353.1;Name=WP_016503353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883428.1;locus_tag=D5F94_RS01185;product=YhgE/Pip domain-containing protein;protein_id=WP_016503353.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 226772 227311 . + . ID=gene-D5F94_RS01190;Name=D5F94_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01190;old_locus_tag=D5F94_01190 NZ_QYTD01000001.1 Protein Homology CDS 226772 227311 . + 0 ID=cds-WP_000245863.1;Parent=gene-D5F94_RS01190;Dbxref=GenBank:WP_000245863.1;Name=WP_000245863.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771890.1;locus_tag=D5F94_RS01190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000245863.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 227397 227693 . - . ID=gene-D5F94_RS01195;Name=D5F94_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01195;old_locus_tag=D5F94_01195 NZ_QYTD01000001.1 Protein Homology CDS 227397 227693 . - 0 ID=cds-WP_016481360.1;Parent=gene-D5F94_RS01195;Dbxref=GenBank:WP_016481360.1;Name=WP_016481360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052252.1;locus_tag=D5F94_RS01195;product=DUF4298 domain-containing protein;protein_id=WP_016481360.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 227936 228547 . - . ID=gene-D5F94_RS01200;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=D5F94_RS01200;old_locus_tag=D5F94_01200 NZ_QYTD01000001.1 Protein Homology CDS 227936 228547 . - 0 ID=cds-WP_000092759.1;Parent=gene-D5F94_RS01200;Dbxref=GenBank:WP_000092759.1;Name=WP_000092759.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=D5F94_RS01200;product=30S ribosomal protein S4;protein_id=WP_000092759.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 228877 229164 . - . ID=gene-D5F94_RS01205;Name=D5F94_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01205;old_locus_tag=D5F94_01205 NZ_QYTD01000001.1 Protein Homology CDS 228877 229164 . - 0 ID=cds-WP_001278152.1;Parent=gene-D5F94_RS01205;Dbxref=GenBank:WP_001278152.1;Name=WP_001278152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278154.1;locus_tag=D5F94_RS01205;product=Veg family protein;protein_id=WP_001278152.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 229176 230531 . - . ID=gene-D5F94_RS01210;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=D5F94_RS01210;old_locus_tag=D5F94_01210 NZ_QYTD01000001.1 Protein Homology CDS 229176 230531 . - 0 ID=cds-WP_000852645.1;Parent=gene-D5F94_RS01210;Dbxref=GenBank:WP_000852645.1;Name=WP_000852645.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852642.1;locus_tag=D5F94_RS01210;product=replicative DNA helicase;protein_id=WP_000852645.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 230574 231026 . - . ID=gene-D5F94_RS01215;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=D5F94_RS01215;old_locus_tag=D5F94_01215 NZ_QYTD01000001.1 Protein Homology CDS 230574 231026 . - 0 ID=cds-WP_000864243.1;Parent=gene-D5F94_RS01215;Dbxref=GenBank:WP_000864243.1;Name=WP_000864243.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864242.1;locus_tag=D5F94_RS01215;product=50S ribosomal protein L9;protein_id=WP_000864243.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 231032 233014 . - . ID=gene-D5F94_RS01220;Name=D5F94_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01220;old_locus_tag=D5F94_01220 NZ_QYTD01000001.1 Protein Homology CDS 231032 233014 . - 0 ID=cds-WP_000819774.1;Parent=gene-D5F94_RS01220;Dbxref=GenBank:WP_000819774.1;Name=WP_000819774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819774.1;locus_tag=D5F94_RS01220;product=DHH family phosphoesterase;protein_id=WP_000819774.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 233081 234982 . - . ID=gene-D5F94_RS01225;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=D5F94_RS01225;old_locus_tag=D5F94_01225 NZ_QYTD01000001.1 Protein Homology CDS 233081 234982 . - 0 ID=cds-WP_016503354.1;Parent=gene-D5F94_RS01225;Dbxref=GenBank:WP_016503354.1;Name=WP_016503354.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481387.1;locus_tag=D5F94_RS01225;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_016503354.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 235152 235763 . - . ID=gene-D5F94_RS01230;Name=D5F94_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01230;old_locus_tag=D5F94_01230 NZ_QYTD01000001.1 Protein Homology CDS 235152 235763 . - 0 ID=cds-WP_000623752.1;Parent=gene-D5F94_RS01230;Dbxref=GenBank:WP_000623752.1;Name=WP_000623752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623753.1;locus_tag=D5F94_RS01230;product=MarC family protein;protein_id=WP_000623752.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 235795 236916 . - . ID=gene-D5F94_RS01235;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=D5F94_RS01235;old_locus_tag=D5F94_01235 NZ_QYTD01000001.1 Protein Homology CDS 235795 236916 . - 0 ID=cds-WP_000131749.1;Parent=gene-D5F94_RS01235;Dbxref=GenBank:WP_000131749.1;Name=WP_000131749.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535986.1;locus_tag=D5F94_RS01235;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000131749.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 237163 237831 . + . ID=gene-D5F94_RS01240;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=D5F94_RS01240;old_locus_tag=D5F94_01240 NZ_QYTD01000001.1 Protein Homology CDS 237163 237831 . + 0 ID=cds-WP_000681579.1;Parent=gene-D5F94_RS01240;Dbxref=GenBank:WP_000681579.1;Name=WP_000681579.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681580.1;locus_tag=D5F94_RS01240;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_000681579.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 237846 238718 . + . ID=gene-D5F94_RS01245;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=D5F94_RS01245;old_locus_tag=D5F94_01245 NZ_QYTD01000001.1 Protein Homology CDS 237846 238718 . + 0 ID=cds-WP_124749337.1;Parent=gene-D5F94_RS01245;Dbxref=GenBank:WP_124749337.1;Name=WP_124749337.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500148.1;locus_tag=D5F94_RS01245;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_124749337.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 238853 239557 . - . ID=gene-D5F94_RS01250;Name=D5F94_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01250;old_locus_tag=D5F94_01250 NZ_QYTD01000001.1 Protein Homology CDS 238853 239557 . - 0 ID=cds-WP_001042660.1;Parent=gene-D5F94_RS01250;Dbxref=GenBank:WP_001042660.1;Name=WP_001042660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042662.1;locus_tag=D5F94_RS01250;product=transglycosylase SLT domain-containing protein;protein_id=WP_001042660.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 239663 240202 . - . ID=gene-D5F94_RS01255;Name=apf;gbkey=Gene;gene=apf;gene_biotype=protein_coding;locus_tag=D5F94_RS01255;old_locus_tag=D5F94_01255 NZ_QYTD01000001.1 Protein Homology CDS 239663 240202 . - 0 ID=cds-WP_000029067.1;Parent=gene-D5F94_RS01255;Dbxref=GenBank:WP_000029067.1;Name=WP_000029067.1;gbkey=CDS;gene=apf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029072.1;locus_tag=D5F94_RS01255;product=aggregation-promoting factor;protein_id=WP_000029067.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 240418 241212 . - . ID=gene-D5F94_RS01260;Name=D5F94_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01260;old_locus_tag=D5F94_01260 NZ_QYTD01000001.1 Protein Homology CDS 240418 241212 . - 0 ID=cds-WP_016503356.1;Parent=gene-D5F94_RS01260;Dbxref=GenBank:WP_016503356.1;Name=WP_016503356.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359357.1;locus_tag=D5F94_RS01260;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_016503356.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 241205 242047 . - . ID=gene-D5F94_RS01265;Name=D5F94_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01265;old_locus_tag=D5F94_01265 NZ_QYTD01000001.1 Protein Homology CDS 241205 242047 . - 0 ID=cds-WP_000510606.1;Parent=gene-D5F94_RS01265;Dbxref=GenBank:WP_000510606.1;Name=WP_000510606.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510607.1;locus_tag=D5F94_RS01265;product=energy-coupling factor transporter ATPase;protein_id=WP_000510606.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 242023 242862 . - . ID=gene-D5F94_RS01270;Name=D5F94_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01270;old_locus_tag=D5F94_01270 NZ_QYTD01000001.1 Protein Homology CDS 242023 242862 . - 0 ID=cds-WP_000181757.1;Parent=gene-D5F94_RS01270;Dbxref=GenBank:WP_000181757.1;Name=WP_000181757.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181759.1;locus_tag=D5F94_RS01270;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000181757.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 242862 243404 . - . ID=gene-D5F94_RS01275;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=D5F94_RS01275;old_locus_tag=D5F94_01275 NZ_QYTD01000001.1 Protein Homology CDS 242862 243404 . - 0 ID=cds-WP_000239224.1;Parent=gene-D5F94_RS01275;Dbxref=GenBank:WP_000239224.1;Name=WP_000239224.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090075.1;locus_tag=D5F94_RS01275;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_000239224.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 243527 244810 . - . ID=gene-D5F94_RS01280;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=D5F94_RS01280;old_locus_tag=D5F94_01280 NZ_QYTD01000001.1 Protein Homology CDS 243527 244810 . - 0 ID=cds-WP_000217765.1;Parent=gene-D5F94_RS01280;Dbxref=GenBank:WP_000217765.1;Name=WP_000217765.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000217763.1;locus_tag=D5F94_RS01280;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_000217765.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 244812 246056 . - . ID=gene-D5F94_RS01285;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=D5F94_RS01285;old_locus_tag=D5F94_01285 NZ_QYTD01000001.1 Protein Homology CDS 244812 246056 . - 0 ID=cds-WP_000706188.1;Parent=gene-D5F94_RS01285;Dbxref=GenBank:WP_000706188.1;Name=WP_000706188.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706188.1;locus_tag=D5F94_RS01285;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_000706188.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 246295 246648 . + . ID=gene-D5F94_RS01290;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D5F94_RS01290;old_locus_tag=D5F94_01290 NZ_QYTD01000001.1 Protein Homology CDS 246295 246648 . + 0 ID=cds-WP_000384867.1;Parent=gene-D5F94_RS01290;Dbxref=GenBank:WP_000384867.1;Name=WP_000384867.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384871.1;locus_tag=D5F94_RS01290;product=S4 domain-containing protein YaaA;protein_id=WP_000384867.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 246651 247760 . + . ID=gene-D5F94_RS01295;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=D5F94_RS01295;old_locus_tag=D5F94_01295 NZ_QYTD01000001.1 Protein Homology CDS 246651 247760 . + 0 ID=cds-WP_000264870.1;Parent=gene-D5F94_RS01295;Dbxref=GenBank:WP_000264870.1;Name=WP_000264870.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632366.1;locus_tag=D5F94_RS01295;product=DNA replication/repair protein RecF;protein_id=WP_000264870.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 247772 248638 . - . ID=gene-D5F94_RS01300;Name=D5F94_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01300;old_locus_tag=D5F94_01300 NZ_QYTD01000001.1 Protein Homology CDS 247772 248638 . - 0 ID=cds-WP_000398683.1;Parent=gene-D5F94_RS01300;Dbxref=GenBank:WP_000398683.1;Name=WP_000398683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650926.1;locus_tag=D5F94_RS01300;product=GRP family sugar transporter;protein_id=WP_000398683.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 248694 249356 . - . ID=gene-D5F94_RS01305;Name=D5F94_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01305;old_locus_tag=D5F94_01305 NZ_QYTD01000001.1 Protein Homology CDS 248694 249356 . - 0 ID=cds-WP_001871057.1;Parent=gene-D5F94_RS01305;Dbxref=GenBank:WP_001871057.1;Name=WP_001871057.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001868421.1;locus_tag=D5F94_RS01305;product=helix-turn-helix domain-containing protein;protein_id=WP_001871057.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 249431 250912 . - . ID=gene-D5F94_RS01310;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=D5F94_RS01310;old_locus_tag=D5F94_01310 NZ_QYTD01000001.1 Protein Homology CDS 249431 250912 . - 0 ID=cds-WP_000073440.1;Parent=gene-D5F94_RS01310;Dbxref=GenBank:WP_000073440.1;Name=WP_000073440.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003085743.1;locus_tag=D5F94_RS01310;product=IMP dehydrogenase;protein_id=WP_000073440.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 251069 251554 . - . ID=gene-D5F94_RS01315;Name=D5F94_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01315;old_locus_tag=D5F94_01315 NZ_QYTD01000001.1 Protein Homology CDS 251069 251554 . - 0 ID=cds-WP_001034427.1;Parent=gene-D5F94_RS01315;Dbxref=GenBank:WP_001034427.1;Name=WP_001034427.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058854.1;locus_tag=D5F94_RS01315;product=arginine repressor;protein_id=WP_001034427.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 251564 252244 . - . ID=gene-D5F94_RS01320;Name=D5F94_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01320;old_locus_tag=D5F94_01320 NZ_QYTD01000001.1 Protein Homology CDS 251564 252244 . - 0 ID=cds-WP_000628848.1;Parent=gene-D5F94_RS01320;Dbxref=GenBank:WP_000628848.1;Name=WP_000628848.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628850.1;locus_tag=D5F94_RS01320;product=Crp/Fnr family transcriptional regulator;protein_id=WP_000628848.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 252452 253156 . + . ID=gene-D5F94_RS01325;Name=D5F94_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01325;old_locus_tag=D5F94_01325 NZ_QYTD01000001.1 Protein Homology CDS 252452 253156 . + 0 ID=cds-WP_086163557.1;Parent=gene-D5F94_RS01325;Dbxref=GenBank:WP_086163557.1;Name=WP_086163557.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159984.1;locus_tag=D5F94_RS01325;product=B3/B4 domain-containing protein;protein_id=WP_086163557.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 253423 254655 . + . ID=gene-D5F94_RS01330;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=D5F94_RS01330;old_locus_tag=D5F94_01330 NZ_QYTD01000001.1 Protein Homology CDS 253423 254655 . + 0 ID=cds-WP_016481399.1;Parent=gene-D5F94_RS01330;Dbxref=GenBank:WP_016481399.1;Name=WP_016481399.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560827.1;locus_tag=D5F94_RS01330;product=arginine deiminase;protein_id=WP_016481399.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 254661 255092 . + . ID=gene-D5F94_RS01335;Name=D5F94_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01335;old_locus_tag=D5F94_01335 NZ_QYTD01000001.1 Protein Homology CDS 254661 255092 . + 0 ID=cds-WP_000772114.1;Parent=gene-D5F94_RS01335;Dbxref=GenBank:WP_000772114.1;Name=WP_000772114.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772116.1;locus_tag=D5F94_RS01335;product=GNAT family N-acetyltransferase;protein_id=WP_000772114.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 255108 256121 . + . ID=gene-D5F94_RS01340;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D5F94_RS01340;old_locus_tag=D5F94_01340 NZ_QYTD01000001.1 Protein Homology CDS 255108 256121 . + 0 ID=cds-WP_000195399.1;Parent=gene-D5F94_RS01340;Dbxref=GenBank:WP_000195399.1;Name=WP_000195399.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000195397.1;locus_tag=D5F94_RS01340;product=ornithine carbamoyltransferase;protein_id=WP_000195399.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 256184 257611 . + . ID=gene-D5F94_RS01345;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=D5F94_RS01345;old_locus_tag=D5F94_01345 NZ_QYTD01000001.1 Protein Homology CDS 256184 257611 . + 0 ID=cds-WP_016503359.1;Parent=gene-D5F94_RS01345;Dbxref=GenBank:WP_016503359.1;Name=WP_016503359.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643994.1;locus_tag=D5F94_RS01345;product=arginine-ornithine antiporter;protein_id=WP_016503359.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 257632 258588 . + . ID=gene-D5F94_RS01350;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=D5F94_RS01350;old_locus_tag=D5F94_01350 NZ_QYTD01000001.1 Protein Homology CDS 257632 258588 . + 0 ID=cds-WP_016503360.1;Parent=gene-D5F94_RS01350;Dbxref=GenBank:WP_016503360.1;Name=WP_016503360.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237849.1;locus_tag=D5F94_RS01350;product=carbamate kinase;protein_id=WP_016503360.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 258709 259734 . - . ID=gene-D5F94_RS01355;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D5F94_RS01355;old_locus_tag=D5F94_01355 NZ_QYTD01000001.1 Protein Homology CDS 258709 259734 . - 0 ID=cds-WP_000165475.1;Parent=gene-D5F94_RS01355;Dbxref=GenBank:WP_000165475.1;Name=WP_000165475.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165454.1;locus_tag=D5F94_RS01355;product=tryptophan--tRNA ligase;protein_id=WP_000165475.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 259842 260534 . - . ID=gene-D5F94_RS01360;Name=D5F94_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01360;old_locus_tag=D5F94_01360 NZ_QYTD01000001.1 Protein Homology CDS 259842 260534 . - 0 ID=cds-WP_124749338.1;Parent=gene-D5F94_RS01360;Dbxref=GenBank:WP_124749338.1;Name=WP_124749338.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250491.1;locus_tag=D5F94_RS01360;product=YoaK family protein;protein_id=WP_124749338.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 260778 261650 . + . ID=gene-D5F94_RS01365;Name=D5F94_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01365;old_locus_tag=D5F94_01365 NZ_QYTD01000001.1 Protein Homology CDS 260778 261650 . + 0 ID=cds-WP_000037681.1;Parent=gene-D5F94_RS01365;Dbxref=GenBank:WP_000037681.1;Name=WP_000037681.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648791.1;locus_tag=D5F94_RS01365;product=YitT family protein;protein_id=WP_000037681.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 261716 263335 . + . ID=gene-D5F94_RS01370;Name=D5F94_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01370;old_locus_tag=D5F94_01370 NZ_QYTD01000001.1 Protein Homology CDS 261716 263335 . + 0 ID=cds-WP_000958804.1;Parent=gene-D5F94_RS01370;Dbxref=GenBank:WP_000958804.1;Name=WP_000958804.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058862.1;locus_tag=D5F94_RS01370;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_000958804.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 263458 266037 . + . ID=gene-D5F94_RS01375;Name=D5F94_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01375;old_locus_tag=D5F94_01375 NZ_QYTD01000001.1 Protein Homology CDS 263458 266037 . + 0 ID=cds-WP_016503361.1;Parent=gene-D5F94_RS01375;Dbxref=GenBank:WP_016503361.1;Name=WP_016503361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154428.1;locus_tag=D5F94_RS01375;product=YfhO family protein;protein_id=WP_016503361.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 266106 266179 . - . ID=gene-D5F94_RS01380;Name=D5F94_RS01380;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01380;old_locus_tag=D5F94_01380 NZ_QYTD01000001.1 tRNAscan-SE tRNA 266106 266179 . - . ID=rna-D5F94_RS01380;Parent=gene-D5F94_RS01380;anticodon=(pos:complement(266143..266145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01380;product=tRNA-Asn NZ_QYTD01000001.1 tRNAscan-SE exon 266106 266179 . - . ID=exon-D5F94_RS01380-1;Parent=rna-D5F94_RS01380;anticodon=(pos:complement(266143..266145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01380;product=tRNA-Asn NZ_QYTD01000001.1 RefSeq gene 266209 266280 . - . ID=gene-D5F94_RS01385;Name=D5F94_RS01385;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01385;old_locus_tag=D5F94_01385 NZ_QYTD01000001.1 tRNAscan-SE tRNA 266209 266280 . - . ID=rna-D5F94_RS01385;Parent=gene-D5F94_RS01385;anticodon=(pos:complement(266245..266247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01385;product=tRNA-Glu NZ_QYTD01000001.1 tRNAscan-SE exon 266209 266280 . - . ID=exon-D5F94_RS01385-1;Parent=rna-D5F94_RS01385;anticodon=(pos:complement(266245..266247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01385;product=tRNA-Glu NZ_QYTD01000001.1 RefSeq gene 266472 266545 . + . ID=gene-D5F94_RS01390;Name=D5F94_RS01390;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01390;old_locus_tag=D5F94_01390 NZ_QYTD01000001.1 tRNAscan-SE tRNA 266472 266545 . + . ID=rna-D5F94_RS01390;Parent=gene-D5F94_RS01390;anticodon=(pos:266506..266508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01390;product=tRNA-Arg NZ_QYTD01000001.1 tRNAscan-SE exon 266472 266545 . + . ID=exon-D5F94_RS01390-1;Parent=rna-D5F94_RS01390;anticodon=(pos:266506..266508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01390;product=tRNA-Arg NZ_QYTD01000001.1 RefSeq gene 266618 267097 . - . ID=gene-D5F94_RS01395;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=D5F94_RS01395;old_locus_tag=D5F94_01395 NZ_QYTD01000001.1 Protein Homology CDS 266618 267097 . - 0 ID=cds-WP_000768336.1;Parent=gene-D5F94_RS01395;Dbxref=GenBank:WP_000768336.1;Name=WP_000768336.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768335.1;locus_tag=D5F94_RS01395;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000768336.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 267298 268527 . + . ID=gene-D5F94_RS01400;Name=D5F94_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01400;old_locus_tag=D5F94_01400 NZ_QYTD01000001.1 Protein Homology CDS 267298 268527 . + 0 ID=cds-WP_016503362.1;Parent=gene-D5F94_RS01400;Dbxref=GenBank:WP_016503362.1;Name=WP_016503362.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650333.1;locus_tag=D5F94_RS01400;product=S1C family serine protease;protein_id=WP_016503362.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 268625 269398 . + . ID=gene-D5F94_RS01405;Name=D5F94_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01405;old_locus_tag=D5F94_01405 NZ_QYTD01000001.1 Protein Homology CDS 268625 269398 . + 0 ID=cds-WP_016503363.1;Parent=gene-D5F94_RS01405;Dbxref=GenBank:WP_016503363.1;Name=WP_016503363.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000456088.1;locus_tag=D5F94_RS01405;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_016503363.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 269607 270968 . + . ID=gene-D5F94_RS01410;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=D5F94_RS01410;old_locus_tag=D5F94_01410 NZ_QYTD01000001.1 Protein Homology CDS 269607 270968 . + 0 ID=cds-WP_086163171.1;Parent=gene-D5F94_RS01410;Dbxref=GenBank:WP_086163171.1;Name=WP_086163171.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657571.1;locus_tag=D5F94_RS01410;product=chromosomal replication initiator protein DnaA;protein_id=WP_086163171.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 271123 272259 . + . ID=gene-D5F94_RS01415;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=D5F94_RS01415;old_locus_tag=D5F94_01415 NZ_QYTD01000001.1 Protein Homology CDS 271123 272259 . + 0 ID=cds-WP_016502364.1;Parent=gene-D5F94_RS01415;Dbxref=GenBank:WP_016502364.1;Name=WP_016502364.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262647.1;locus_tag=D5F94_RS01415;product=DNA polymerase III subunit beta;protein_id=WP_016502364.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 272317 273210 . + . ID=gene-D5F94_RS01420;Name=D5F94_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01420;old_locus_tag=D5F94_01420 NZ_QYTD01000001.1 Protein Homology CDS 272317 273210 . + 0 ID=cds-WP_180383419.1;Parent=gene-D5F94_RS01420;Dbxref=GenBank:WP_180383419.1;Name=WP_180383419.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987440.1;locus_tag=D5F94_RS01420;product=diacylglycerol/lipid kinase family protein;protein_id=WP_180383419.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 273220 273417 . + . ID=gene-D5F94_RS01425;Name=D5F94_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01425;old_locus_tag=D5F94_01425 NZ_QYTD01000001.1 Protein Homology CDS 273220 273417 . + 0 ID=cds-WP_000285199.1;Parent=gene-D5F94_RS01425;Dbxref=GenBank:WP_000285199.1;Name=WP_000285199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048966.1;locus_tag=D5F94_RS01425;product=DUF951 domain-containing protein;protein_id=WP_000285199.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 273585 273737 . + . ID=gene-D5F94_RS01430;Name=D5F94_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01430;old_locus_tag=D5F94_01430 NZ_QYTD01000001.1 Protein Homology CDS 273585 273737 . + 0 ID=cds-WP_071659936.1;Parent=gene-D5F94_RS01430;Dbxref=GenBank:WP_071659936.1;Name=WP_071659936.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369335.1;locus_tag=D5F94_RS01430;product=helix-turn-helix domain-containing protein;protein_id=WP_071659936.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 273981 275096 . + . ID=gene-D5F94_RS01435;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=D5F94_RS01435;old_locus_tag=D5F94_01435 NZ_QYTD01000001.1 Protein Homology CDS 273981 275096 . + 0 ID=cds-WP_001218686.1;Parent=gene-D5F94_RS01435;Dbxref=GenBank:WP_001218686.1;Name=WP_001218686.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=D5F94_RS01435;product=redox-regulated ATPase YchF;protein_id=WP_001218686.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 275180 275755 . + . ID=gene-D5F94_RS01440;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=D5F94_RS01440;old_locus_tag=D5F94_01440 NZ_QYTD01000001.1 Protein Homology CDS 275180 275755 . + 0 ID=cds-WP_000240202.1;Parent=gene-D5F94_RS01440;Dbxref=GenBank:WP_000240202.1;Name=WP_000240202.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240196.1;locus_tag=D5F94_RS01440;product=aminoacyl-tRNA hydrolase;protein_id=WP_000240202.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 275752 279249 . + . ID=gene-D5F94_RS01445;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=D5F94_RS01445;old_locus_tag=D5F94_01445 NZ_QYTD01000001.1 Protein Homology CDS 275752 279249 . + 0 ID=cds-WP_016502366.1;Parent=gene-D5F94_RS01445;Dbxref=GenBank:WP_016502366.1;Name=WP_016502366.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021186.1;locus_tag=D5F94_RS01445;product=transcription-repair coupling factor;protein_id=WP_016502366.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 279540 279812 . + . ID=gene-D5F94_RS01455;Name=D5F94_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01455;old_locus_tag=D5F94_01455 NZ_QYTD01000001.1 Protein Homology CDS 279540 279812 . + 0 ID=cds-WP_001234967.1;Parent=gene-D5F94_RS01455;Dbxref=GenBank:WP_001234967.1;Name=WP_001234967.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234967.1;locus_tag=D5F94_RS01455;product=RNA-binding S4 domain-containing protein;protein_id=WP_001234967.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 279799 280170 . + . ID=gene-D5F94_RS01460;Name=D5F94_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01460;old_locus_tag=D5F94_01460 NZ_QYTD01000001.1 Protein Homology CDS 279799 280170 . + 0 ID=cds-WP_000042845.1;Parent=gene-D5F94_RS01460;Dbxref=GenBank:WP_000042845.1;Name=WP_000042845.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042845.1;locus_tag=D5F94_RS01460;product=septum formation initiator family protein;protein_id=WP_000042845.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 280173 280307 . + . ID=gene-D5F94_RS01465;Name=D5F94_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01465;old_locus_tag=D5F94_01465 NZ_QYTD01000001.1 Protein Homology CDS 280173 280307 . + 0 ID=cds-WP_001061058.1;Parent=gene-D5F94_RS01465;Dbxref=GenBank:WP_001061058.1;Name=WP_001061058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061058.1;locus_tag=D5F94_RS01465;product=SP_0009 family protein;protein_id=WP_001061058.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 280307 281593 . + . ID=gene-D5F94_RS01470;Name=D5F94_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01470;old_locus_tag=D5F94_01470 NZ_QYTD01000001.1 Protein Homology CDS 280307 281593 . + 0 ID=cds-WP_000757205.1;Parent=gene-D5F94_RS01470;Dbxref=GenBank:WP_000757205.1;Name=WP_000757205.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757202.1;locus_tag=D5F94_RS01470;product=serine hydrolase;protein_id=WP_000757205.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 281595 282869 . + . ID=gene-D5F94_RS01475;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=D5F94_RS01475;old_locus_tag=D5F94_01475 NZ_QYTD01000001.1 Protein Homology CDS 281595 282869 . + 0 ID=cds-WP_016502367.1;Parent=gene-D5F94_RS01475;Dbxref=GenBank:WP_016502367.1;Name=WP_016502367.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058263.1;locus_tag=D5F94_RS01475;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_016502367.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 282874 283416 . + . ID=gene-D5F94_RS01480;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=D5F94_RS01480;old_locus_tag=D5F94_01480 NZ_QYTD01000001.1 Protein Homology CDS 282874 283416 . + 0 ID=cds-WP_000892188.1;Parent=gene-D5F94_RS01480;Dbxref=GenBank:WP_000892188.1;Name=WP_000892188.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961310.1;locus_tag=D5F94_RS01480;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000892188.1;transl_table=11 NZ_QYTD01000001.1 RefSeq gene 283439 285415 . + . ID=gene-D5F94_RS01485;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=D5F94_RS01485;old_locus_tag=D5F94_01485 NZ_QYTD01000001.1 Protein Homology CDS 283439 285415 . + 0 ID=cds-WP_000794525.1;Parent=gene-D5F94_RS01485;Dbxref=GenBank:WP_000794525.1;Name=WP_000794525.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480147.1;locus_tag=D5F94_RS01485;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_000794525.1;transl_table=11 ##sequence-region NZ_QYTD01000010.1 1 33837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000010.1 RefSeq region 1 33837 . + . ID=NZ_QYTD01000010.1:1..33837;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000010.1 RefSeq gene 1 201 . + . ID=gene-D5F94_RS07620;Name=D5F94_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07620;old_locus_tag=D5F94_07620;partial=true;start_range=.,1 NZ_QYTD01000010.1 Protein Homology CDS 1 201 . + 0 ID=cds-WP_142997328.1;Parent=gene-D5F94_RS07620;Dbxref=GenBank:WP_142997328.1;Name=WP_142997328.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS07620;partial=true;product=IS3 family transposase;protein_id=WP_142997328.1;start_range=.,1;transl_table=11 NZ_QYTD01000010.1 RefSeq pseudogene 238 602 . - . ID=gene-D5F94_RS07625;Name=D5F94_RS07625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07625;old_locus_tag=D5F94_07625;partial=true;pseudo=true;start_range=.,238 NZ_QYTD01000010.1 Protein Homology CDS 238 602 . - 0 ID=cds-D5F94_RS07625;Parent=gene-D5F94_RS07625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447421.1;locus_tag=D5F94_RS07625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,238;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 1081 1452 . - . ID=gene-D5F94_RS07630;Name=D5F94_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07630;old_locus_tag=D5F94_07630 NZ_QYTD01000010.1 Protein Homology CDS 1081 1452 . - 0 ID=cds-WP_109897977.1;Parent=gene-D5F94_RS07630;Dbxref=GenBank:WP_109897977.1;Name=WP_109897977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282473.1;locus_tag=D5F94_RS07630;product=hypothetical protein;protein_id=WP_109897977.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 1775 1861 . - . ID=gene-D5F94_RS07635;Name=D5F94_RS07635;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS07635;old_locus_tag=D5F94_07635 NZ_QYTD01000010.1 tRNAscan-SE tRNA 1775 1861 . - . ID=rna-D5F94_RS07635;Parent=gene-D5F94_RS07635;anticodon=(pos:complement(1825..1827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07635;product=tRNA-Ser NZ_QYTD01000010.1 tRNAscan-SE exon 1775 1861 . - . ID=exon-D5F94_RS07635-1;Parent=rna-D5F94_RS07635;anticodon=(pos:complement(1825..1827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07635;product=tRNA-Ser NZ_QYTD01000010.1 RefSeq gene 1905 2540 . - . ID=gene-D5F94_RS07640;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=D5F94_RS07640;old_locus_tag=D5F94_07640 NZ_QYTD01000010.1 Protein Homology CDS 1905 2540 . - 0 ID=cds-WP_086163233.1;Parent=gene-D5F94_RS07640;Dbxref=GenBank:WP_086163233.1;Name=WP_086163233.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266023.1;locus_tag=D5F94_RS07640;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_086163233.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 2530 3330 . - . ID=gene-D5F94_RS07645;Name=ccrZ;gbkey=Gene;gene=ccrZ;gene_biotype=protein_coding;locus_tag=D5F94_RS07645;old_locus_tag=D5F94_07645 NZ_QYTD01000010.1 Protein Homology CDS 2530 3330 . - 0 ID=cds-WP_000155919.1;Parent=gene-D5F94_RS07645;Dbxref=GenBank:WP_000155919.1;Name=WP_000155919.1;Ontology_term=GO:0006270,GO:0051726,GO:0004747,GO:0016773,GO:0019200;gbkey=CDS;gene=ccrZ;go_function=ribokinase activity|0004747||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of cell cycle|0051726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155919.1;locus_tag=D5F94_RS07645;product=cell cycle regulator CcrZ;protein_id=WP_000155919.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 3388 4422 . - . ID=gene-D5F94_RS07650;Name=D5F94_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07650;old_locus_tag=D5F94_07650 NZ_QYTD01000010.1 Protein Homology CDS 3388 4422 . - 0 ID=cds-WP_016502539.1;Parent=gene-D5F94_RS07650;Dbxref=GenBank:WP_016502539.1;Name=WP_016502539.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732713.1;locus_tag=D5F94_RS07650;product=ABC transporter permease;protein_id=WP_016502539.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 4424 5149 . - . ID=gene-D5F94_RS07655;Name=D5F94_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07655;old_locus_tag=D5F94_07655 NZ_QYTD01000010.1 Protein Homology CDS 4424 5149 . - 0 ID=cds-WP_000912307.1;Parent=gene-D5F94_RS07655;Dbxref=GenBank:WP_000912307.1;Name=WP_000912307.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647293.1;locus_tag=D5F94_RS07655;product=ABC transporter ATP-binding protein;protein_id=WP_000912307.1;transl_table=11 NZ_QYTD01000010.1 RefSeq pseudogene 5221 5406 . + . ID=gene-D5F94_RS07660;Name=D5F94_RS07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07660;old_locus_tag=D5F94_07660;pseudo=true NZ_QYTD01000010.1 Protein Homology CDS 5221 5406 . + 0 ID=cds-D5F94_RS07660;Parent=gene-D5F94_RS07660;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368100.1;locus_tag=D5F94_RS07660;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 5458 5961 . - . ID=gene-D5F94_RS07665;Name=D5F94_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07665;old_locus_tag=D5F94_07665 NZ_QYTD01000010.1 Protein Homology CDS 5458 5961 . - 0 ID=cds-WP_000773456.1;Parent=gene-D5F94_RS07665;Dbxref=GenBank:WP_000773456.1;Name=WP_000773456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285166.1;locus_tag=D5F94_RS07665;product=hypothetical protein;protein_id=WP_000773456.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 6297 6716 . + . ID=gene-D5F94_RS07670;Name=D5F94_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07670;old_locus_tag=D5F94_07670 NZ_QYTD01000010.1 Protein Homology CDS 6297 6716 . + 0 ID=cds-WP_124749533.1;Parent=gene-D5F94_RS07670;Dbxref=GenBank:WP_124749533.1;Name=WP_124749533.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631690.1;locus_tag=D5F94_RS07670;product=HIT family protein;protein_id=WP_124749533.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 6713 7009 . + . ID=gene-D5F94_RS07675;Name=D5F94_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07675;old_locus_tag=D5F94_07675 NZ_QYTD01000010.1 Protein Homology CDS 6713 7009 . + 0 ID=cds-WP_000690175.1;Parent=gene-D5F94_RS07675;Dbxref=GenBank:WP_000690175.1;Name=WP_000690175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647456.1;locus_tag=D5F94_RS07675;product=hypothetical protein;protein_id=WP_000690175.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 7073 8380 . - . ID=gene-D5F94_RS07680;Name=lytR;gbkey=Gene;gene=lytR;gene_biotype=protein_coding;gene_synonym=brpA;locus_tag=D5F94_RS07680;old_locus_tag=D5F94_07680 NZ_QYTD01000010.1 Protein Homology CDS 7073 8380 . - 0 ID=cds-WP_124749191.1;Parent=gene-D5F94_RS07680;Dbxref=GenBank:WP_124749191.1;Name=WP_124749191.1;gbkey=CDS;gene=lytR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708155.1;locus_tag=D5F94_RS07680;product=glycopolymer--peptidoglycan transferase LytR;protein_id=WP_124749191.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 8389 8910 . - . ID=gene-D5F94_RS07685;Name=D5F94_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07685;old_locus_tag=D5F94_07685 NZ_QYTD01000010.1 Protein Homology CDS 8389 8910 . - 0 ID=cds-WP_000043141.1;Parent=gene-D5F94_RS07685;Dbxref=GenBank:WP_000043141.1;Name=WP_000043141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647017.1;locus_tag=D5F94_RS07685;product=GNAT family N-acetyltransferase;protein_id=WP_000043141.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 8903 9346 . - . ID=gene-D5F94_RS07690;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=D5F94_RS07690;old_locus_tag=D5F94_07690 NZ_QYTD01000010.1 Protein Homology CDS 8903 9346 . - 0 ID=cds-WP_016502535.1;Parent=gene-D5F94_RS07690;Dbxref=GenBank:WP_016502535.1;Name=WP_016502535.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500161.1;locus_tag=D5F94_RS07690;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_016502535.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 9495 10916 . - . ID=gene-D5F94_RS07695;Name=D5F94_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07695;old_locus_tag=D5F94_07695 NZ_QYTD01000010.1 Protein Homology CDS 9495 10916 . - 0 ID=cds-WP_016502534.1;Parent=gene-D5F94_RS07695;Dbxref=GenBank:WP_016502534.1;Name=WP_016502534.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410401.1;locus_tag=D5F94_RS07695;product=NCS2 family permease;protein_id=WP_016502534.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 11019 11630 . - . ID=gene-D5F94_RS07700;Name=D5F94_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07700;old_locus_tag=D5F94_07700 NZ_QYTD01000010.1 Protein Homology CDS 11019 11630 . - 0 ID=cds-WP_000865226.1;Parent=gene-D5F94_RS07700;Dbxref=GenBank:WP_000865226.1;Name=WP_000865226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865224.1;locus_tag=D5F94_RS07700;product=DUF1361 domain-containing protein;protein_id=WP_000865226.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 11720 12304 . - . ID=gene-D5F94_RS07705;Name=D5F94_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07705;old_locus_tag=D5F94_07705 NZ_QYTD01000010.1 Protein Homology CDS 11720 12304 . - 0 ID=cds-WP_000734042.1;Parent=gene-D5F94_RS07705;Dbxref=GenBank:WP_000734042.1;Name=WP_000734042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734041.1;locus_tag=D5F94_RS07705;product=hypothetical protein;protein_id=WP_000734042.1;transl_table=11 NZ_QYTD01000010.1 RefSeq pseudogene 12393 13206 . + . ID=gene-D5F94_RS07710;Name=D5F94_RS07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07710;old_locus_tag=D5F94_07710;pseudo=true NZ_QYTD01000010.1 Protein Homology CDS 12393 13206 . + 0 ID=cds-D5F94_RS07710;Parent=gene-D5F94_RS07710;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162329.1;locus_tag=D5F94_RS07710;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 13509 14519 . + . ID=gene-D5F94_RS07720;Name=D5F94_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07720;old_locus_tag=D5F94_07720 NZ_QYTD01000010.1 Protein Homology CDS 13509 14519 . + 0 ID=cds-WP_000511108.1;Parent=gene-D5F94_RS07720;Dbxref=GenBank:WP_000511108.1;Name=WP_000511108.1;Ontology_term=GO:0009401,GO:0008982,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044984.1;locus_tag=D5F94_RS07720;product=PTS sugar transporter subunit IIB;protein_id=WP_000511108.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 14552 15364 . + . ID=gene-D5F94_RS07725;Name=D5F94_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07725;old_locus_tag=D5F94_07725 NZ_QYTD01000010.1 Protein Homology CDS 14552 15364 . + 0 ID=cds-WP_000763693.1;Parent=gene-D5F94_RS07725;Dbxref=GenBank:WP_000763693.1;Name=WP_000763693.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763694.1;locus_tag=D5F94_RS07725;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_000763693.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 15379 16290 . + . ID=gene-D5F94_RS07730;Name=D5F94_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07730;old_locus_tag=D5F94_07730 NZ_QYTD01000010.1 Protein Homology CDS 15379 16290 . + 0 ID=cds-WP_000139227.1;Parent=gene-D5F94_RS07730;Dbxref=GenBank:WP_000139227.1;Name=WP_000139227.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139230.1;locus_tag=D5F94_RS07730;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000139227.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 16409 16771 . + . ID=gene-D5F94_RS07735;Name=D5F94_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07735;old_locus_tag=D5F94_07735 NZ_QYTD01000010.1 Protein Homology CDS 16409 16771 . + 0 ID=cds-WP_000079341.1;Parent=gene-D5F94_RS07735;Dbxref=GenBank:WP_000079341.1;Name=WP_000079341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058367.1;locus_tag=D5F94_RS07735;product=DUF956 family protein;protein_id=WP_000079341.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 16809 17870 . - . ID=gene-D5F94_RS07740;Name=D5F94_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07740;old_locus_tag=D5F94_07740 NZ_QYTD01000010.1 Protein Homology CDS 16809 17870 . - 0 ID=cds-WP_124749537.1;Parent=gene-D5F94_RS07740;Dbxref=GenBank:WP_124749537.1;Name=WP_124749537.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417627.1;locus_tag=D5F94_RS07740;product=acyltransferase;protein_id=WP_124749537.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 18167 19444 . + . ID=gene-D5F94_RS07745;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=D5F94_RS07745;old_locus_tag=D5F94_07745 NZ_QYTD01000010.1 Protein Homology CDS 18167 19444 . + 0 ID=cds-WP_000886190.1;Parent=gene-D5F94_RS07745;Dbxref=GenBank:WP_000886190.1;Name=WP_000886190.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886194.1;locus_tag=D5F94_RS07745;product=serine--tRNA ligase;protein_id=WP_000886190.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 19490 20122 . - . ID=gene-D5F94_RS07750;Name=D5F94_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07750;old_locus_tag=D5F94_07750 NZ_QYTD01000010.1 Protein Homology CDS 19490 20122 . - 0 ID=cds-WP_124749539.1;Parent=gene-D5F94_RS07750;Dbxref=GenBank:WP_124749539.1;Name=WP_124749539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284161.1;locus_tag=D5F94_RS07750;product=HI_0552 family protein;protein_id=WP_124749539.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 20589 21362 . - . ID=gene-D5F94_RS07755;Name=D5F94_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07755;old_locus_tag=D5F94_07755 NZ_QYTD01000010.1 Protein Homology CDS 20589 21362 . - 0 ID=cds-WP_001058273.1;Parent=gene-D5F94_RS07755;Dbxref=GenBank:WP_001058273.1;Name=WP_001058273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058273.1;locus_tag=D5F94_RS07755;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_001058273.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 21355 22230 . - . ID=gene-D5F94_RS07760;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=D5F94_RS07760;old_locus_tag=D5F94_07760 NZ_QYTD01000010.1 Protein Homology CDS 21355 22230 . - 0 ID=cds-WP_016502529.1;Parent=gene-D5F94_RS07760;Dbxref=GenBank:WP_016502529.1;Name=WP_016502529.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480323.1;locus_tag=D5F94_RS07760;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_016502529.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 22239 23609 . - . ID=gene-D5F94_RS07765;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=D5F94_RS07765;old_locus_tag=D5F94_07765 NZ_QYTD01000010.1 Protein Homology CDS 22239 23609 . - 0 ID=cds-WP_016502528.1;Parent=gene-D5F94_RS07765;Dbxref=GenBank:WP_016502528.1;Name=WP_016502528.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473508.1;locus_tag=D5F94_RS07765;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_016502528.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 23647 24069 . - . ID=gene-D5F94_RS07770;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=D5F94_RS07770;old_locus_tag=D5F94_07770 NZ_QYTD01000010.1 Protein Homology CDS 23647 24069 . - 0 ID=cds-WP_000565430.1;Parent=gene-D5F94_RS07770;Dbxref=GenBank:WP_000565430.1;Name=WP_000565430.1;Ontology_term=GO:0006633,GO:0016836,GO:0019171;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA,(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565430.1;locus_tag=D5F94_RS07770;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000565430.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 24066 24566 . - . ID=gene-D5F94_RS07775;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=D5F94_RS07775;old_locus_tag=D5F94_07775 NZ_QYTD01000010.1 Protein Homology CDS 24066 24566 . - 0 ID=cds-WP_000354298.1;Parent=gene-D5F94_RS07775;Dbxref=GenBank:WP_000354298.1;Name=WP_000354298.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354298.1;locus_tag=D5F94_RS07775;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354298.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 24568 25800 . - . ID=gene-D5F94_RS07780;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=D5F94_RS07780;old_locus_tag=D5F94_07780 NZ_QYTD01000010.1 Protein Homology CDS 24568 25800 . - 0 ID=cds-WP_016502527.1;Parent=gene-D5F94_RS07780;Dbxref=GenBank:WP_016502527.1;Name=WP_016502527.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012679081.1;locus_tag=D5F94_RS07780;product=beta-ketoacyl-ACP synthase II;protein_id=WP_016502527.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 25816 26550 . - . ID=gene-D5F94_RS07785;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=D5F94_RS07785;old_locus_tag=D5F94_07785 NZ_QYTD01000010.1 Protein Homology CDS 25816 26550 . - 0 ID=cds-WP_016502526.1;Parent=gene-D5F94_RS07785;Dbxref=GenBank:WP_016502526.1;Name=WP_016502526.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771521.1;locus_tag=D5F94_RS07785;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_016502526.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 26559 27485 . - . ID=gene-D5F94_RS07790;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=D5F94_RS07790;old_locus_tag=D5F94_07790 NZ_QYTD01000010.1 Protein Homology CDS 26559 27485 . - 0 ID=cds-WP_016502525.1;Parent=gene-D5F94_RS07790;Dbxref=GenBank:WP_016502525.1;Name=WP_016502525.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058362.1;locus_tag=D5F94_RS07790;product=ACP S-malonyltransferase;protein_id=WP_016502525.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 27505 28464 . - . ID=gene-D5F94_RS07795;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=D5F94_RS07795;old_locus_tag=D5F94_07795 NZ_QYTD01000010.1 Protein Homology CDS 27505 28464 . - 0 ID=cds-WP_016502524.1;Parent=gene-D5F94_RS07795;Dbxref=GenBank:WP_016502524.1;Name=WP_016502524.1;Ontology_term=GO:0018580;gbkey=CDS;gene=fabK;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857470.1;locus_tag=D5F94_RS07795;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=WP_016502524.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 28618 28842 . - . ID=gene-D5F94_RS07800;Name=D5F94_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07800;old_locus_tag=D5F94_07800 NZ_QYTD01000010.1 Protein Homology CDS 28618 28842 . - 0 ID=cds-WP_000257836.1;Parent=gene-D5F94_RS07800;Dbxref=GenBank:WP_000257836.1;Name=WP_000257836.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938891.1;locus_tag=D5F94_RS07800;product=acyl carrier protein;protein_id=WP_000257836.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 28900 29871 . - . ID=gene-D5F94_RS07805;Name=D5F94_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07805;old_locus_tag=D5F94_07805 NZ_QYTD01000010.1 Protein Homology CDS 28900 29871 . - 0 ID=cds-WP_000230690.1;Parent=gene-D5F94_RS07805;Dbxref=GenBank:WP_000230690.1;Name=WP_000230690.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230695.1;locus_tag=D5F94_RS07805;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000230690.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 29871 30305 . - . ID=gene-D5F94_RS07810;Name=fabT;gbkey=Gene;gene=fabT;gene_biotype=protein_coding;locus_tag=D5F94_RS07810;old_locus_tag=D5F94_07810 NZ_QYTD01000010.1 Protein Homology CDS 29871 30305 . - 0 ID=cds-WP_000455488.1;Parent=gene-D5F94_RS07810;Dbxref=GenBank:WP_000455488.1;Name=WP_000455488.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fabT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455488.1;locus_tag=D5F94_RS07810;product=fatty acid biosynthesis transcriptional regulator FabT;protein_id=WP_000455488.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 30401 31192 . - . ID=gene-D5F94_RS07815;Name=D5F94_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07815;old_locus_tag=D5F94_07815 NZ_QYTD01000010.1 Protein Homology CDS 30401 31192 . - 0 ID=cds-WP_016502522.1;Parent=gene-D5F94_RS07815;Dbxref=GenBank:WP_016502522.1;Name=WP_016502522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667362.1;locus_tag=D5F94_RS07815;product=enoyl-CoA hydratase;protein_id=WP_016502522.1;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 31329 31979 . - . ID=gene-D5F94_RS07825;Name=D5F94_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07825;old_locus_tag=D5F94_07825 NZ_QYTD01000010.1 Protein Homology CDS 31329 31979 . - 0 ID=cds-WP_000335411.1;Parent=gene-D5F94_RS07825;Dbxref=GenBank:WP_000335411.1;Name=WP_000335411.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001900118.1;locus_tag=D5F94_RS07825;product=HAD family hydrolase;protein_id=WP_000335411.1;transl_table=11 NZ_QYTD01000010.1 RefSeq pseudogene 32073 33426 . + . ID=gene-D5F94_RS07830;Name=D5F94_RS07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07830;old_locus_tag=D5F94_07830;pseudo=true NZ_QYTD01000010.1 Protein Homology CDS 32073 33426 . + 0 ID=cds-D5F94_RS07830;Parent=gene-D5F94_RS07830;Note=frameshifted;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480318.1;locus_tag=D5F94_RS07830;product=aspartate kinase;pseudo=true;transl_table=11 NZ_QYTD01000010.1 RefSeq gene 33643 33716 . - . ID=gene-D5F94_RS07835;Name=D5F94_RS07835;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS07835;old_locus_tag=D5F94_07835 NZ_QYTD01000010.1 tRNAscan-SE tRNA 33643 33716 . - . ID=rna-D5F94_RS07835;Parent=gene-D5F94_RS07835;anticodon=(pos:complement(33680..33682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07835;product=tRNA-Asn NZ_QYTD01000010.1 tRNAscan-SE exon 33643 33716 . - . ID=exon-D5F94_RS07835-1;Parent=rna-D5F94_RS07835;anticodon=(pos:complement(33680..33682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07835;product=tRNA-Asn NZ_QYTD01000010.1 RefSeq gene 33722 33837 . - . ID=gene-D5F94_RS07840;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F94_RS07840;old_locus_tag=D5F94_07840 NZ_QYTD01000010.1 cmsearch rRNA 33722 33837 . - . ID=rna-D5F94_RS07840;Parent=gene-D5F94_RS07840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS07840;product=5S ribosomal RNA NZ_QYTD01000010.1 cmsearch exon 33722 33837 . - . ID=exon-D5F94_RS07840-1;Parent=rna-D5F94_RS07840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS07840;product=5S ribosomal RNA ##sequence-region NZ_QYTD01000011.1 1 15878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000011.1 RefSeq region 1 15878 . + . ID=NZ_QYTD01000011.1:1..15878;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000011.1 RefSeq pseudogene 1 151 . - . ID=gene-D5F94_RS07845;Name=D5F94_RS07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07845;old_locus_tag=D5F94_07845;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000011.1 Protein Homology CDS 1 151 . - 0 ID=cds-D5F94_RS07845;Parent=gene-D5F94_RS07845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F94_RS07845;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000011.1 RefSeq pseudogene 287 1803 . - . ID=gene-D5F94_RS07850;Name=D5F94_RS07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07850;old_locus_tag=D5F94_07850;pseudo=true NZ_QYTD01000011.1 Protein Homology CDS 287 1803 . - 0 ID=cds-D5F94_RS07850;Parent=gene-D5F94_RS07850;Note=frameshifted;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222906.1;locus_tag=D5F94_RS07850;product=FGGY-family carbohydrate kinase;pseudo=true;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 1869 2858 . - . ID=gene-D5F94_RS07855;Name=D5F94_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07855;old_locus_tag=D5F94_07855 NZ_QYTD01000011.1 Protein Homology CDS 1869 2858 . - 0 ID=cds-WP_124749541.1;Parent=gene-D5F94_RS07855;Dbxref=GenBank:WP_124749541.1;Name=WP_124749541.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503225.1;locus_tag=D5F94_RS07855;product=amidohydrolase family protein;protein_id=WP_124749541.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 2855 4276 . - . ID=gene-D5F94_RS07860;Name=D5F94_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07860;old_locus_tag=D5F94_07860 NZ_QYTD01000011.1 Protein Homology CDS 2855 4276 . - 0 ID=cds-WP_124749543.1;Parent=gene-D5F94_RS07860;Dbxref=GenBank:WP_124749543.1;Name=WP_124749543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503226.1;locus_tag=D5F94_RS07860;product=PTS galactitol transporter subunit IIC;protein_id=WP_124749543.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 4374 5330 . - . ID=gene-D5F94_RS07865;Name=D5F94_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07865;old_locus_tag=D5F94_07865 NZ_QYTD01000011.1 Protein Homology CDS 4374 5330 . - 0 ID=cds-WP_000358400.1;Parent=gene-D5F94_RS07865;Dbxref=GenBank:WP_000358400.1;Name=WP_000358400.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766789.1;locus_tag=D5F94_RS07865;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000358400.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 5349 6368 . - . ID=gene-D5F94_RS07870;Name=D5F94_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07870;old_locus_tag=D5F94_07870 NZ_QYTD01000011.1 Protein Homology CDS 5349 6368 . - 0 ID=cds-WP_000700537.1;Parent=gene-D5F94_RS07870;Dbxref=GenBank:WP_000700537.1;Name=WP_000700537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700533.1;locus_tag=D5F94_RS07870;product=hypothetical protein;protein_id=WP_000700537.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 6603 7586 . - . ID=gene-D5F94_RS07875;Name=D5F94_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07875;old_locus_tag=D5F94_07875 NZ_QYTD01000011.1 Protein Homology CDS 6603 7586 . - 0 ID=cds-WP_000462143.1;Parent=gene-D5F94_RS07875;Dbxref=GenBank:WP_000462143.1;Name=WP_000462143.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462136.1;locus_tag=D5F94_RS07875;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000462143.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 7749 8396 . - . ID=gene-D5F94_RS07880;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=D5F94_RS07880;old_locus_tag=D5F94_07880 NZ_QYTD01000011.1 Protein Homology CDS 7749 8396 . - 0 ID=cds-WP_000873297.1;Parent=gene-D5F94_RS07880;Dbxref=GenBank:WP_000873297.1;Name=WP_000873297.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481225.1;locus_tag=D5F94_RS07880;product=fructose-6-phosphate aldolase;protein_id=WP_000873297.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 8407 9123 . - . ID=gene-D5F94_RS07885;Name=D5F94_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07885;old_locus_tag=D5F94_07885 NZ_QYTD01000011.1 Protein Homology CDS 8407 9123 . - 0 ID=cds-WP_124749545.1;Parent=gene-D5F94_RS07885;Dbxref=GenBank:WP_124749545.1;Name=WP_124749545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934215.1;locus_tag=D5F94_RS07885;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_124749545.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 9125 9988 . - . ID=gene-D5F94_RS07890;Name=D5F94_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07890;old_locus_tag=D5F94_07890 NZ_QYTD01000011.1 Protein Homology CDS 9125 9988 . - 0 ID=cds-WP_016503229.1;Parent=gene-D5F94_RS07890;Dbxref=GenBank:WP_016503229.1;Name=WP_016503229.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297181.1;locus_tag=D5F94_RS07890;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_016503229.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 9992 10657 . - . ID=gene-D5F94_RS07895;Name=D5F94_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07895;old_locus_tag=D5F94_07895 NZ_QYTD01000011.1 Protein Homology CDS 9992 10657 . - 0 ID=cds-WP_016481227.1;Parent=gene-D5F94_RS07895;Dbxref=GenBank:WP_016481227.1;Name=WP_016481227.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166733.1;locus_tag=D5F94_RS07895;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016481227.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 10770 11255 . - . ID=gene-D5F94_RS07900;Name=D5F94_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07900;old_locus_tag=D5F94_07900 NZ_QYTD01000011.1 Protein Homology CDS 10770 11255 . - 0 ID=cds-WP_016481228.1;Parent=gene-D5F94_RS07900;Dbxref=GenBank:WP_016481228.1;Name=WP_016481228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002267837.1;locus_tag=D5F94_RS07900;product=PTS sugar transporter subunit IIA;protein_id=WP_016481228.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 11322 11600 . - . ID=gene-D5F94_RS07905;Name=D5F94_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07905;old_locus_tag=D5F94_07905 NZ_QYTD01000011.1 Protein Homology CDS 11322 11600 . - 0 ID=cds-WP_000241475.1;Parent=gene-D5F94_RS07905;Dbxref=GenBank:WP_000241475.1;Name=WP_000241475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241478.1;locus_tag=D5F94_RS07905;product=PTS sugar transporter subunit IIB;protein_id=WP_000241475.1;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 11628 13067 . - . ID=gene-D5F94_RS07910;Name=D5F94_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07910;old_locus_tag=D5F94_07910 NZ_QYTD01000011.1 Protein Homology CDS 11628 13067 . - 0 ID=cds-WP_016481229.1;Parent=gene-D5F94_RS07910;Dbxref=GenBank:WP_016481229.1;Name=WP_016481229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427086.1;locus_tag=D5F94_RS07910;product=PTS sugar transporter subunit IIC;protein_id=WP_016481229.1;transl_table=11 NZ_QYTD01000011.1 RefSeq pseudogene 13088 14625 . - . ID=gene-D5F94_RS07915;Name=D5F94_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07915;old_locus_tag=D5F94_07915;pseudo=true NZ_QYTD01000011.1 Protein Homology CDS 13088 14625 . - 0 ID=cds-D5F94_RS07915;Parent=gene-D5F94_RS07915;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057423.1;locus_tag=D5F94_RS07915;product=IS1182 family transposase;pseudo=true;transl_table=11 NZ_QYTD01000011.1 RefSeq gene 14759 15376 . - . ID=gene-D5F94_RS07920;Name=D5F94_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07920;old_locus_tag=D5F94_07920 NZ_QYTD01000011.1 Protein Homology CDS 14759 15376 . - 0 ID=cds-WP_001224528.1;Parent=gene-D5F94_RS07920;Dbxref=GenBank:WP_001224528.1;Name=WP_001224528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772020.1;locus_tag=D5F94_RS07920;product=hypothetical protein;protein_id=WP_001224528.1;transl_table=11 NZ_QYTD01000011.1 RefSeq pseudogene 15713 15878 . + . ID=gene-D5F94_RS07925;Name=D5F94_RS07925;end_range=15878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07925;old_locus_tag=D5F94_07925;partial=true;pseudo=true NZ_QYTD01000011.1 Protein Homology CDS 15713 15878 . + 0 ID=cds-D5F94_RS07925;Parent=gene-D5F94_RS07925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F94_RS07925;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000012.1 1 80174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000012.1 RefSeq region 1 80174 . + . ID=NZ_QYTD01000012.1:1..80174;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000012.1 RefSeq gene 1 67 . - . ID=gene-D5F94_RS07930;Name=D5F94_RS07930;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F94_RS07930;old_locus_tag=D5F94_07930;partial=true;start_range=.,1 NZ_QYTD01000012.1 cmsearch rRNA 1 67 . - . ID=rna-D5F94_RS07930;Parent=gene-D5F94_RS07930;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS07930;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_QYTD01000012.1 cmsearch exon 1 67 . - . ID=exon-D5F94_RS07930-1;Parent=rna-D5F94_RS07930;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS07930;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_QYTD01000012.1 RefSeq gene 390 944 . - . ID=gene-D5F94_RS07935;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=D5F94_RS07935;old_locus_tag=D5F94_07935 NZ_QYTD01000012.1 Protein Homology CDS 390 944 . - 0 ID=cds-WP_000599096.1;Parent=gene-D5F94_RS07935;Dbxref=GenBank:WP_000599096.1;Name=WP_000599096.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599095.1;locus_tag=D5F94_RS07935;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_000599096.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 1021 1686 . - . ID=gene-D5F94_RS07940;Name=D5F94_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07940;old_locus_tag=D5F94_07940 NZ_QYTD01000012.1 Protein Homology CDS 1021 1686 . - 0 ID=cds-WP_000128287.1;Parent=gene-D5F94_RS07940;Dbxref=GenBank:WP_000128287.1;Name=WP_000128287.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128288.1;locus_tag=D5F94_RS07940;product=ComF family protein;protein_id=WP_000128287.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 1686 2975 . - . ID=gene-D5F94_RS07945;Name=D5F94_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07945;old_locus_tag=D5F94_07945 NZ_QYTD01000012.1 Protein Homology CDS 1686 2975 . - 0 ID=cds-WP_016502518.1;Parent=gene-D5F94_RS07945;Dbxref=GenBank:WP_016502518.1;Name=WP_016502518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771642.1;locus_tag=D5F94_RS07945;product=DEAD/DEAH box helicase;protein_id=WP_016502518.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 3031 3675 . + . ID=gene-D5F94_RS07950;Name=D5F94_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07950;old_locus_tag=D5F94_07950 NZ_QYTD01000012.1 Protein Homology CDS 3031 3675 . + 0 ID=cds-WP_001108145.1;Parent=gene-D5F94_RS07950;Dbxref=GenBank:WP_001108145.1;Name=WP_001108145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108146.1;locus_tag=D5F94_RS07950;product=YigZ family protein;protein_id=WP_001108145.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 3766 4692 . + . ID=gene-D5F94_RS07955;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=D5F94_RS07955;old_locus_tag=D5F94_07955 NZ_QYTD01000012.1 Protein Homology CDS 3766 4692 . + 0 ID=cds-WP_124749547.1;Parent=gene-D5F94_RS07955;Dbxref=GenBank:WP_124749547.1;Name=WP_124749547.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646141.1;locus_tag=D5F94_RS07955;product=cysteine synthase A;protein_id=WP_124749547.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 4844 5932 . - . ID=gene-D5F94_RS07960;Name=D5F94_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07960;old_locus_tag=D5F94_07960 NZ_QYTD01000012.1 Protein Homology CDS 4844 5932 . - 0 ID=cds-WP_000862118.1;Parent=gene-D5F94_RS07960;Dbxref=GenBank:WP_000862118.1;Name=WP_000862118.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862121.1;locus_tag=D5F94_RS07960;product=glycerol dehydrogenase;protein_id=WP_000862118.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 6000 6668 . - . ID=gene-D5F94_RS07965;Name=D5F94_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07965;old_locus_tag=D5F94_07965 NZ_QYTD01000012.1 Protein Homology CDS 6000 6668 . - 0 ID=cds-WP_000394894.1;Parent=gene-D5F94_RS07965;Dbxref=GenBank:WP_000394894.1;Name=WP_000394894.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394891.1;locus_tag=D5F94_RS07965;product=fructose-6-phosphate aldolase;protein_id=WP_000394894.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 6678 9134 . - . ID=gene-D5F94_RS07970;Name=D5F94_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07970;old_locus_tag=D5F94_07970 NZ_QYTD01000012.1 Protein Homology CDS 6678 9134 . - 0 ID=cds-WP_124749549.1;Parent=gene-D5F94_RS07970;Dbxref=GenBank:WP_124749549.1;Name=WP_124749549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166131.1;locus_tag=D5F94_RS07970;product=glycyl radical protein;protein_id=WP_124749549.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 9315 10616 . - . ID=gene-D5F94_RS07975;Name=D5F94_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07975;old_locus_tag=D5F94_07975 NZ_QYTD01000012.1 Protein Homology CDS 9315 10616 . - 0 ID=cds-WP_016502514.1;Parent=gene-D5F94_RS07975;Dbxref=GenBank:WP_016502514.1;Name=WP_016502514.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032678.1;locus_tag=D5F94_RS07975;product=PTS sugar transporter subunit IIC;protein_id=WP_016502514.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 10618 10938 . - . ID=gene-D5F94_RS07980;Name=D5F94_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07980;old_locus_tag=D5F94_07980 NZ_QYTD01000012.1 Protein Homology CDS 10618 10938 . - 0 ID=cds-WP_000590363.1;Parent=gene-D5F94_RS07980;Dbxref=GenBank:WP_000590363.1;Name=WP_000590363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644439.1;locus_tag=D5F94_RS07980;product=PTS sugar transporter subunit IIB;protein_id=WP_000590363.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 10955 11278 . - . ID=gene-D5F94_RS07985;Name=D5F94_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07985;old_locus_tag=D5F94_07985 NZ_QYTD01000012.1 Protein Homology CDS 10955 11278 . - 0 ID=cds-WP_000402898.1;Parent=gene-D5F94_RS07985;Dbxref=GenBank:WP_000402898.1;Name=WP_000402898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402898.1;locus_tag=D5F94_RS07985;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_000402898.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 11482 12465 . - . ID=gene-D5F94_RS07990;Name=D5F94_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07990;old_locus_tag=D5F94_07990 NZ_QYTD01000012.1 Protein Homology CDS 11482 12465 . - 0 ID=cds-WP_124749563.1;Parent=gene-D5F94_RS07990;Dbxref=GenBank:WP_124749563.1;Name=WP_124749563.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764457.1;locus_tag=D5F94_RS07990;product=sugar-binding transcriptional regulator;protein_id=WP_124749563.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 12584 13339 . - . ID=gene-D5F94_RS07995;Name=D5F94_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07995;old_locus_tag=D5F94_07995 NZ_QYTD01000012.1 Protein Homology CDS 12584 13339 . - 0 ID=cds-WP_001080743.1;Parent=gene-D5F94_RS07995;Dbxref=GenBank:WP_001080743.1;Name=WP_001080743.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080747.1;locus_tag=D5F94_RS07995;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001080743.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 13460 14236 . + . ID=gene-D5F94_RS08000;Name=D5F94_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08000;old_locus_tag=D5F94_08000 NZ_QYTD01000012.1 Protein Homology CDS 13460 14236 . + 0 ID=cds-WP_016502513.1;Parent=gene-D5F94_RS08000;Dbxref=GenBank:WP_016502513.1;Name=WP_016502513.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647428.1;locus_tag=D5F94_RS08000;product=glycyl-radical enzyme activating protein;protein_id=WP_016502513.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 14282 14638 . - . ID=gene-D5F94_RS08005;Name=D5F94_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08005;old_locus_tag=D5F94_08005 NZ_QYTD01000012.1 Protein Homology CDS 14282 14638 . - 0 ID=cds-WP_000689608.1;Parent=gene-D5F94_RS08005;Dbxref=GenBank:WP_000689608.1;Name=WP_000689608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644186.1;locus_tag=D5F94_RS08005;product=S1 RNA-binding domain-containing protein;protein_id=WP_000689608.1;transl_table=11 NZ_QYTD01000012.1 RefSeq pseudogene 14640 16041 . - . ID=gene-D5F94_RS10645;Name=D5F94_RS10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10645;old_locus_tag=D5F94_08010;pseudo=true NZ_QYTD01000012.1 Protein Homology CDS 14640 16041 . - 0 ID=cds-D5F94_RS10645;Parent=gene-D5F94_RS10645;Note=frameshifted;Ontology_term=GO:0000413,GO:0003755,GO:0016791;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,phosphatase activity|0016791||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058358.1;locus_tag=D5F94_RS10645;product=bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase;pseudo=true;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 16083 16724 . - . ID=gene-D5F94_RS08015;Name=D5F94_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08015;old_locus_tag=D5F94_08015 NZ_QYTD01000012.1 Protein Homology CDS 16083 16724 . - 0 ID=cds-WP_000357891.1;Parent=gene-D5F94_RS08015;Dbxref=GenBank:WP_000357891.1;Name=WP_000357891.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480307.1;locus_tag=D5F94_RS08015;product=response regulator transcription factor;protein_id=WP_000357891.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 16717 17736 . - . ID=gene-D5F94_RS08020;Name=D5F94_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08020;old_locus_tag=D5F94_08020 NZ_QYTD01000012.1 Protein Homology CDS 16717 17736 . - 0 ID=cds-WP_016502510.1;Parent=gene-D5F94_RS08020;Dbxref=GenBank:WP_016502510.1;Name=WP_016502510.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645977.1;locus_tag=D5F94_RS08020;product=sensor histidine kinase;protein_id=WP_016502510.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 17733 18428 . - . ID=gene-D5F94_RS08025;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=D5F94_RS08025;old_locus_tag=D5F94_08025 NZ_QYTD01000012.1 Protein Homology CDS 17733 18428 . - 0 ID=cds-WP_000714456.1;Parent=gene-D5F94_RS08025;Dbxref=GenBank:WP_000714456.1;Name=WP_000714456.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714455.1;locus_tag=D5F94_RS08025;product=cell wall-active antibiotics response protein LiaF;protein_id=WP_000714456.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 18587 20542 . - . ID=gene-D5F94_RS08030;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=D5F94_RS08030;old_locus_tag=D5F94_08030 NZ_QYTD01000012.1 Protein Homology CDS 18587 20542 . - 0 ID=cds-WP_016502509.1;Parent=gene-D5F94_RS08030;Dbxref=GenBank:WP_016502509.1;Name=WP_016502509.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614563.1;locus_tag=D5F94_RS08030;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_016502509.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 20542 21279 . - . ID=gene-D5F94_RS08035;Name=D5F94_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08035;old_locus_tag=D5F94_08035 NZ_QYTD01000012.1 Protein Homology CDS 20542 21279 . - 0 ID=cds-WP_000406234.1;Parent=gene-D5F94_RS08035;Dbxref=GenBank:WP_000406234.1;Name=WP_000406234.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406232.1;locus_tag=D5F94_RS08035;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_000406234.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 21317 22639 . - . ID=gene-D5F94_RS08040;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=D5F94_RS08040;old_locus_tag=D5F94_08040 NZ_QYTD01000012.1 Protein Homology CDS 21317 22639 . - 0 ID=cds-WP_016502508.1;Parent=gene-D5F94_RS08040;Dbxref=GenBank:WP_016502508.1;Name=WP_016502508.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262608.1;locus_tag=D5F94_RS08040;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_016502508.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 22629 23564 . - . ID=gene-D5F94_RS08045;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=D5F94_RS08045;old_locus_tag=D5F94_08045 NZ_QYTD01000012.1 Protein Homology CDS 22629 23564 . - 0 ID=cds-WP_016502507.1;Parent=gene-D5F94_RS08045;Dbxref=GenBank:WP_016502507.1;Name=WP_016502507.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163891.1;locus_tag=D5F94_RS08045;product=methionyl-tRNA formyltransferase;protein_id=WP_016502507.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 23611 26001 . - . ID=gene-D5F94_RS08050;Name=D5F94_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08050;old_locus_tag=D5F94_08050 NZ_QYTD01000012.1 Protein Homology CDS 23611 26001 . - 0 ID=cds-WP_124749551.1;Parent=gene-D5F94_RS08050;Dbxref=GenBank:WP_124749551.1;Name=WP_124749551.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101529.1;locus_tag=D5F94_RS08050;product=primosomal protein N';protein_id=WP_124749551.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 26075 26389 . - . ID=gene-D5F94_RS08055;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=D5F94_RS08055;old_locus_tag=D5F94_08055 NZ_QYTD01000012.1 Protein Homology CDS 26075 26389 . - 0 ID=cds-WP_000979239.1;Parent=gene-D5F94_RS08055;Dbxref=GenBank:WP_000979239.1;Name=WP_000979239.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979238.1;locus_tag=D5F94_RS08055;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000979239.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 26412 27041 . - . ID=gene-D5F94_RS08060;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=D5F94_RS08060;old_locus_tag=D5F94_08060 NZ_QYTD01000012.1 Protein Homology CDS 26412 27041 . - 0 ID=cds-WP_000003861.1;Parent=gene-D5F94_RS08060;Dbxref=GenBank:WP_000003861.1;Name=WP_000003861.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003862.1;locus_tag=D5F94_RS08060;product=guanylate kinase;protein_id=WP_000003861.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 27208 27912 . - . ID=gene-D5F94_RS08065;Name=D5F94_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08065;old_locus_tag=D5F94_08065 NZ_QYTD01000012.1 Protein Homology CDS 27208 27912 . - 0 ID=cds-WP_016502505.1;Parent=gene-D5F94_RS08065;Dbxref=GenBank:WP_016502505.1;Name=WP_016502505.1;Ontology_term=GO:0071805,GO:0005267,GO:0015252,GO:0022841;gbkey=CDS;go_function=potassium channel activity|0005267||IEA,proton channel activity|0015252||IEA,potassium ion leak channel activity|0022841||IEA;go_process=potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168921.1;locus_tag=D5F94_RS08065;product=TMEM175 family protein;protein_id=WP_016502505.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 27961 28551 . - . ID=gene-D5F94_RS08070;Name=D5F94_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08070;old_locus_tag=D5F94_08070 NZ_QYTD01000012.1 Protein Homology CDS 27961 28551 . - 0 ID=cds-WP_016502504.1;Parent=gene-D5F94_RS08070;Dbxref=GenBank:WP_016502504.1;Name=WP_016502504.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502504.1;locus_tag=D5F94_RS08070;product=response regulator transcription factor;protein_id=WP_016502504.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 28553 29638 . - . ID=gene-D5F94_RS08075;Name=D5F94_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08075;old_locus_tag=D5F94_08075 NZ_QYTD01000012.1 Protein Homology CDS 28553 29638 . - 0 ID=cds-WP_016502503.1;Parent=gene-D5F94_RS08075;Dbxref=GenBank:WP_016502503.1;Name=WP_016502503.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791351.1;locus_tag=D5F94_RS08075;product=sensor histidine kinase;protein_id=WP_016502503.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 29635 30375 . - . ID=gene-D5F94_RS08080;Name=D5F94_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08080;old_locus_tag=D5F94_08080 NZ_QYTD01000012.1 Protein Homology CDS 29635 30375 . - 0 ID=cds-WP_001217939.1;Parent=gene-D5F94_RS08080;Dbxref=GenBank:WP_001217939.1;Name=WP_001217939.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285114.1;locus_tag=D5F94_RS08080;product=ABC transporter permease;protein_id=WP_001217939.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 30362 31258 . - . ID=gene-D5F94_RS08085;Name=D5F94_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08085;old_locus_tag=D5F94_08085 NZ_QYTD01000012.1 Protein Homology CDS 30362 31258 . - 0 ID=cds-WP_086163219.1;Parent=gene-D5F94_RS08085;Dbxref=GenBank:WP_086163219.1;Name=WP_086163219.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029972.1;locus_tag=D5F94_RS08085;product=ABC transporter ATP-binding protein;protein_id=WP_086163219.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 31387 32994 . - . ID=gene-D5F94_RS08095;Name=D5F94_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08095;old_locus_tag=D5F94_08095 NZ_QYTD01000012.1 Protein Homology CDS 31387 32994 . - 0 ID=cds-WP_000481839.1;Parent=gene-D5F94_RS08095;Dbxref=GenBank:WP_000481839.1;Name=WP_000481839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771814.1;locus_tag=D5F94_RS08095;product=ribonuclease Y;protein_id=WP_000481839.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 33183 33665 . + . ID=gene-D5F94_RS08100;Name=D5F94_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08100;old_locus_tag=D5F94_08100 NZ_QYTD01000012.1 Protein Homology CDS 33183 33665 . + 0 ID=cds-WP_000159885.1;Parent=gene-D5F94_RS08100;Dbxref=GenBank:WP_000159885.1;Name=WP_000159885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885585.1;locus_tag=D5F94_RS08100;product=S-ribosylhomocysteine lyase;protein_id=WP_000159885.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 33890 35377 . - . ID=gene-D5F94_RS08105;Name=D5F94_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08105;old_locus_tag=D5F94_08105 NZ_QYTD01000012.1 Protein Homology CDS 33890 35377 . - 0 ID=cds-WP_016502498.1;Parent=gene-D5F94_RS08105;Dbxref=GenBank:WP_016502498.1;Name=WP_016502498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287870.1;locus_tag=D5F94_RS08105;product=cell division site-positioning protein MapZ family protein;protein_id=WP_016502498.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 35390 36544 . - . ID=gene-D5F94_RS08110;Name=D5F94_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08110;old_locus_tag=D5F94_08110 NZ_QYTD01000012.1 Protein Homology CDS 35390 36544 . - 0 ID=cds-WP_000664848.1;Parent=gene-D5F94_RS08110;Dbxref=GenBank:WP_000664848.1;Name=WP_000664848.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664853.1;locus_tag=D5F94_RS08110;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_000664848.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 36627 36995 . - . ID=gene-D5F94_RS08115;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=D5F94_RS08115;old_locus_tag=D5F94_08115 NZ_QYTD01000012.1 cmsearch RNase_P_RNA 36627 36995 . - . ID=rna-D5F94_RS08115;Parent=gene-D5F94_RS08115;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS08115;product=RNase P RNA component class B NZ_QYTD01000012.1 cmsearch exon 36627 36995 . - . ID=exon-D5F94_RS08115-1;Parent=rna-D5F94_RS08115;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS08115;product=RNase P RNA component class B NZ_QYTD01000012.1 RefSeq gene 37014 37346 . - . ID=gene-D5F94_RS08120;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=D5F94_RS08120;old_locus_tag=D5F94_08120 NZ_QYTD01000012.1 Protein Homology CDS 37014 37346 . - 0 ID=cds-WP_000146544.1;Parent=gene-D5F94_RS08120;Dbxref=GenBank:WP_000146544.1;Name=WP_000146544.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146543.1;locus_tag=D5F94_RS08120;product=cell division regulator GpsB;protein_id=WP_000146544.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 37467 37985 . - . ID=gene-D5F94_RS08130;Name=D5F94_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08130;old_locus_tag=D5F94_08130 NZ_QYTD01000012.1 Protein Homology CDS 37467 37985 . - 0 ID=cds-WP_000843096.1;Parent=gene-D5F94_RS08130;Dbxref=GenBank:WP_000843096.1;Name=WP_000843096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843102.1;locus_tag=D5F94_RS08130;product=DUF1273 domain-containing protein;protein_id=WP_000843096.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 38060 38659 . + . ID=gene-D5F94_RS08135;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=D5F94_RS08135;old_locus_tag=D5F94_08135 NZ_QYTD01000012.1 Protein Homology CDS 38060 38659 . + 0 ID=cds-WP_000248792.1;Parent=gene-D5F94_RS08135;Dbxref=GenBank:WP_000248792.1;Name=WP_000248792.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248791.1;locus_tag=D5F94_RS08135;product=Holliday junction resolvase RecU;protein_id=WP_000248792.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 38646 40886 . + . ID=gene-D5F94_RS08140;Name=pbp1a;gbkey=Gene;gene=pbp1a;gene_biotype=protein_coding;locus_tag=D5F94_RS08140;old_locus_tag=D5F94_08140 NZ_QYTD01000012.1 Protein Homology CDS 38646 40886 . + 0 ID=cds-WP_086163218.1;Parent=gene-D5F94_RS08140;Dbxref=GenBank:WP_086163218.1;Name=WP_086163218.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp1a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628363.1;locus_tag=D5F94_RS08140;product=penicillin-binding protein PBP1A;protein_id=WP_086163218.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 40932 42266 . - . ID=gene-D5F94_RS08145;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=D5F94_RS08145;old_locus_tag=D5F94_08145 NZ_QYTD01000012.1 Protein Homology CDS 40932 42266 . - 0 ID=cds-WP_016502493.1;Parent=gene-D5F94_RS08145;Dbxref=GenBank:WP_016502493.1;Name=WP_016502493.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041114.1;locus_tag=D5F94_RS08145;product=aminopeptidase C;protein_id=WP_016502493.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 42379 43200 . - . ID=gene-D5F94_RS08150;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=D5F94_RS08150;old_locus_tag=D5F94_08150 NZ_QYTD01000012.1 Protein Homology CDS 42379 43200 . - 0 ID=cds-WP_000174854.1;Parent=gene-D5F94_RS08150;Dbxref=GenBank:WP_000174854.1;Name=WP_000174854.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949400.1;locus_tag=D5F94_RS08150;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174854.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 43197 44657 . - . ID=gene-D5F94_RS08155;Name=D5F94_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08155;old_locus_tag=D5F94_08155 NZ_QYTD01000012.1 Protein Homology CDS 43197 44657 . - 0 ID=cds-WP_016502492.1;Parent=gene-D5F94_RS08155;Dbxref=GenBank:WP_016502492.1;Name=WP_016502492.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649304.1;locus_tag=D5F94_RS08155;product=nicotinate phosphoribosyltransferase;protein_id=WP_016502492.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 44815 45729 . - . ID=gene-D5F94_RS08160;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=D5F94_RS08160;old_locus_tag=D5F94_08160 NZ_QYTD01000012.1 Protein Homology CDS 44815 45729 . - 0 ID=cds-WP_000272353.1;Parent=gene-D5F94_RS08160;Dbxref=GenBank:WP_000272353.1;Name=WP_000272353.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480293.1;locus_tag=D5F94_RS08160;product=thioredoxin-disulfide reductase;protein_id=WP_000272353.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 45798 46022 . - . ID=gene-D5F94_RS08165;Name=D5F94_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08165;old_locus_tag=D5F94_08165 NZ_QYTD01000012.1 Protein Homology CDS 45798 46022 . - 0 ID=cds-WP_000478227.1;Parent=gene-D5F94_RS08165;Dbxref=GenBank:WP_000478227.1;Name=WP_000478227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646607.1;locus_tag=D5F94_RS08165;product=DUF4059 family protein;protein_id=WP_000478227.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 46144 46887 . - . ID=gene-D5F94_RS08170;Name=D5F94_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08170;old_locus_tag=D5F94_08170 NZ_QYTD01000012.1 Protein Homology CDS 46144 46887 . - 0 ID=cds-WP_000593862.1;Parent=gene-D5F94_RS08170;Dbxref=GenBank:WP_000593862.1;Name=WP_000593862.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768437.1;locus_tag=D5F94_RS08170;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000593862.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 46887 47690 . - . ID=gene-D5F94_RS08175;Name=D5F94_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08175;old_locus_tag=D5F94_08175 NZ_QYTD01000012.1 Protein Homology CDS 46887 47690 . - 0 ID=cds-WP_016502491.1;Parent=gene-D5F94_RS08175;Dbxref=GenBank:WP_016502491.1;Name=WP_016502491.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071292.1;locus_tag=D5F94_RS08175;product=amino acid ABC transporter permease;protein_id=WP_016502491.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 47785 48597 . - . ID=gene-D5F94_RS08180;Name=D5F94_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08180;old_locus_tag=D5F94_08180 NZ_QYTD01000012.1 Protein Homology CDS 47785 48597 . - 0 ID=cds-WP_016502490.1;Parent=gene-D5F94_RS08180;Dbxref=GenBank:WP_016502490.1;Name=WP_016502490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473469.1;locus_tag=D5F94_RS08180;product=transporter substrate-binding domain-containing protein;protein_id=WP_016502490.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 48735 50078 . - . ID=gene-D5F94_RS08185;Name=D5F94_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08185;old_locus_tag=D5F94_08185 NZ_QYTD01000012.1 Protein Homology CDS 48735 50078 . - 0 ID=cds-WP_000008553.1;Parent=gene-D5F94_RS08185;Dbxref=GenBank:WP_000008553.1;Name=WP_000008553.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008535518.1;locus_tag=D5F94_RS08185;product=DEAD/DEAH box helicase;protein_id=WP_000008553.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 50176 51186 . - . ID=gene-D5F94_RS08190;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=D5F94_RS08190;old_locus_tag=D5F94_08190 NZ_QYTD01000012.1 Protein Homology CDS 50176 51186 . - 0 ID=cds-WP_000480019.1;Parent=gene-D5F94_RS08190;Dbxref=GenBank:WP_000480019.1;Name=WP_000480019.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480019.1;locus_tag=D5F94_RS08190;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000480019.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 51188 53419 . - . ID=gene-D5F94_RS08195;Name=pbp2x;gbkey=Gene;gene=pbp2x;gene_biotype=protein_coding;gene_synonym=pbpX;locus_tag=D5F94_RS08195;old_locus_tag=D5F94_08195 NZ_QYTD01000012.1 Protein Homology CDS 51188 53419 . - 0 ID=cds-WP_124749553.1;Parent=gene-D5F94_RS08195;Dbxref=GenBank:WP_124749553.1;Name=WP_124749553.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2x;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030930.1;locus_tag=D5F94_RS08195;product=penicillin-binding protein PBP2X;protein_id=WP_124749553.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 53451 53777 . - . ID=gene-D5F94_RS08200;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=D5F94_RS08200;old_locus_tag=D5F94_08200 NZ_QYTD01000012.1 Protein Homology CDS 53451 53777 . - 0 ID=cds-WP_000180568.1;Parent=gene-D5F94_RS08200;Dbxref=GenBank:WP_000180568.1;Name=WP_000180568.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180570.1;locus_tag=D5F94_RS08200;product=cell division protein FtsL;protein_id=WP_000180568.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 53792 54739 . - . ID=gene-D5F94_RS08205;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=D5F94_RS08205;old_locus_tag=D5F94_08205 NZ_QYTD01000012.1 Protein Homology CDS 53792 54739 . - 0 ID=cds-WP_000180264.1;Parent=gene-D5F94_RS08205;Dbxref=GenBank:WP_000180264.1;Name=WP_000180264.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631664.1;locus_tag=D5F94_RS08205;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000180264.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 54822 56081 . - . ID=gene-D5F94_RS08210;Name=D5F94_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08210;old_locus_tag=D5F94_08210 NZ_QYTD01000012.1 Protein Homology CDS 54822 56081 . - 0 ID=cds-WP_124749555.1;Parent=gene-D5F94_RS08210;Dbxref=GenBank:WP_124749555.1;Name=WP_124749555.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221014.1;locus_tag=D5F94_RS08210;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_124749555.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 56091 56894 . - . ID=gene-D5F94_RS08215;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=D5F94_RS08215;old_locus_tag=D5F94_08215 NZ_QYTD01000012.1 Protein Homology CDS 56091 56894 . - 0 ID=cds-WP_124749557.1;Parent=gene-D5F94_RS08215;Dbxref=GenBank:WP_124749557.1;Name=WP_124749557.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502487.1;locus_tag=D5F94_RS08215;product=glutamate 5-kinase;protein_id=WP_124749557.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 57035 58420 . + . ID=gene-D5F94_RS08220;Name=D5F94_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08220;old_locus_tag=D5F94_08220 NZ_QYTD01000012.1 Protein Homology CDS 57035 58420 . + 0 ID=cds-WP_016480287.1;Parent=gene-D5F94_RS08220;Dbxref=GenBank:WP_016480287.1;Name=WP_016480287.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643962.1;locus_tag=D5F94_RS08220;product=PTS transporter subunit EIIC;protein_id=WP_016480287.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 58628 60232 . - . ID=gene-D5F94_RS08225;Name=D5F94_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08225;old_locus_tag=D5F94_08225 NZ_QYTD01000012.1 Protein Homology CDS 58628 60232 . - 0 ID=cds-WP_016480286.1;Parent=gene-D5F94_RS08225;Dbxref=GenBank:WP_016480286.1;Name=WP_016480286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644442.1;locus_tag=D5F94_RS08225;product=ABC transporter permease;protein_id=WP_016480286.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 60236 60970 . - . ID=gene-D5F94_RS08230;Name=D5F94_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08230;old_locus_tag=D5F94_08230 NZ_QYTD01000012.1 Protein Homology CDS 60236 60970 . - 0 ID=cds-WP_000589158.1;Parent=gene-D5F94_RS08230;Dbxref=GenBank:WP_000589158.1;Name=WP_000589158.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644658.1;locus_tag=D5F94_RS08230;product=ABC transporter ATP-binding protein;protein_id=WP_000589158.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 60990 61295 . - . ID=gene-D5F94_RS08235;Name=D5F94_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08235;old_locus_tag=D5F94_08235 NZ_QYTD01000012.1 Protein Homology CDS 60990 61295 . - 0 ID=cds-WP_000711207.1;Parent=gene-D5F94_RS08235;Dbxref=GenBank:WP_000711207.1;Name=WP_000711207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711205.1;locus_tag=D5F94_RS08235;product=bacteriocin immunity protein;protein_id=WP_000711207.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 61508 63493 . - . ID=gene-D5F94_RS08240;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=D5F94_RS08240;old_locus_tag=D5F94_08240 NZ_QYTD01000012.1 Protein Homology CDS 61508 63493 . - 0 ID=cds-WP_000141859.1;Parent=gene-D5F94_RS08240;Dbxref=GenBank:WP_000141859.1;Name=WP_000141859.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771905.1;locus_tag=D5F94_RS08240;product=transketolase;protein_id=WP_000141859.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 63618 65048 . - . ID=gene-D5F94_RS08245;Name=D5F94_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08245;old_locus_tag=D5F94_08245 NZ_QYTD01000012.1 Protein Homology CDS 63618 65048 . - 0 ID=cds-WP_047199433.1;Parent=gene-D5F94_RS08245;Dbxref=GenBank:WP_047199433.1;Name=WP_047199433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217288.1;locus_tag=D5F94_RS08245;product=helix-turn-helix domain-containing protein;protein_id=WP_047199433.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 65039 66376 . - . ID=gene-D5F94_RS08250;Name=D5F94_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08250;old_locus_tag=D5F94_08250 NZ_QYTD01000012.1 Protein Homology CDS 65039 66376 . - 0 ID=cds-WP_016480284.1;Parent=gene-D5F94_RS08250;Dbxref=GenBank:WP_016480284.1;Name=WP_016480284.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137245.1;locus_tag=D5F94_RS08250;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016480284.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 66464 67162 . - . ID=gene-D5F94_RS08255;Name=D5F94_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08255;old_locus_tag=D5F94_08255 NZ_QYTD01000012.1 Protein Homology CDS 66464 67162 . - 0 ID=cds-WP_016480283.1;Parent=gene-D5F94_RS08255;Dbxref=GenBank:WP_016480283.1;Name=WP_016480283.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350768.1;locus_tag=D5F94_RS08255;product=MIP/aquaporin family protein;protein_id=WP_016480283.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 67174 69003 . - . ID=gene-D5F94_RS08260;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=D5F94_RS08260;old_locus_tag=D5F94_08260 NZ_QYTD01000012.1 Protein Homology CDS 67174 69003 . - 0 ID=cds-WP_124749559.1;Parent=gene-D5F94_RS08260;Dbxref=GenBank:WP_124749559.1;Name=WP_124749559.1;Ontology_term=GO:0006072,GO:0004368;gbkey=CDS;gene=glpO;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646203.1;locus_tag=D5F94_RS08260;product=type 1 glycerol-3-phosphate oxidase;protein_id=WP_124749559.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 69016 70524 . - . ID=gene-D5F94_RS08265;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=D5F94_RS08265;old_locus_tag=D5F94_08265 NZ_QYTD01000012.1 Protein Homology CDS 69016 70524 . - 0 ID=cds-WP_124749561.1;Parent=gene-D5F94_RS08265;Dbxref=GenBank:WP_124749561.1;Name=WP_124749561.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093523.1;locus_tag=D5F94_RS08265;product=glycerol kinase GlpK;protein_id=WP_124749561.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 70639 70902 . - . ID=gene-D5F94_RS08270;Name=D5F94_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08270;old_locus_tag=D5F94_08270 NZ_QYTD01000012.1 Protein Homology CDS 70639 70902 . - 0 ID=cds-WP_016480280.1;Parent=gene-D5F94_RS08270;Dbxref=GenBank:WP_016480280.1;Name=WP_016480280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571497.1;locus_tag=D5F94_RS08270;product=DUF1294 domain-containing protein;protein_id=WP_016480280.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 70991 71248 . - . ID=gene-D5F94_RS08275;Name=D5F94_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08275;old_locus_tag=D5F94_08275 NZ_QYTD01000012.1 Protein Homology CDS 70991 71248 . - 0 ID=cds-WP_000371297.1;Parent=gene-D5F94_RS08275;Dbxref=GenBank:WP_000371297.1;Name=WP_000371297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983550.1;locus_tag=D5F94_RS08275;product=DUF896 family protein;protein_id=WP_000371297.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 71260 73299 . - . ID=gene-D5F94_RS08280;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=D5F94_RS08280;old_locus_tag=D5F94_08280 NZ_QYTD01000012.1 Protein Homology CDS 71260 73299 . - 0 ID=cds-WP_086163210.1;Parent=gene-D5F94_RS08280;Dbxref=GenBank:WP_086163210.1;Name=WP_086163210.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768433.1;locus_tag=D5F94_RS08280;product=glycine--tRNA ligase subunit beta;protein_id=WP_086163210.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 73303 73944 . - . ID=gene-D5F94_RS08285;Name=D5F94_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08285;old_locus_tag=D5F94_08285 NZ_QYTD01000012.1 Protein Homology CDS 73303 73944 . - 0 ID=cds-WP_016480278.1;Parent=gene-D5F94_RS08285;Dbxref=GenBank:WP_016480278.1;Name=WP_016480278.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094117.1;locus_tag=D5F94_RS08285;product=FMN-dependent NADH-azoreductase;protein_id=WP_016480278.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 73944 74858 . - . ID=gene-D5F94_RS08290;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=D5F94_RS08290;old_locus_tag=D5F94_08290 NZ_QYTD01000012.1 Protein Homology CDS 73944 74858 . - 0 ID=cds-WP_000038755.1;Parent=gene-D5F94_RS08290;Dbxref=GenBank:WP_000038755.1;Name=WP_000038755.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038754.1;locus_tag=D5F94_RS08290;product=glycine--tRNA ligase subunit alpha;protein_id=WP_000038755.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 75171 75713 . - . ID=gene-D5F94_RS08295;Name=D5F94_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08295;old_locus_tag=D5F94_08295 NZ_QYTD01000012.1 Protein Homology CDS 75171 75713 . - 0 ID=cds-WP_000022341.1;Parent=gene-D5F94_RS08295;Dbxref=GenBank:WP_000022341.1;Name=WP_000022341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022342.1;locus_tag=D5F94_RS08295;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_000022341.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 75832 76980 . - . ID=gene-D5F94_RS08300;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=D5F94_RS08300;old_locus_tag=D5F94_08300 NZ_QYTD01000012.1 Protein Homology CDS 75832 76980 . - 0 ID=cds-WP_000170470.1;Parent=gene-D5F94_RS08300;Dbxref=GenBank:WP_000170470.1;Name=WP_000170470.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170478.1;locus_tag=D5F94_RS08300;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000170470.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 77258 77965 . - . ID=gene-D5F94_RS08305;Name=D5F94_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08305;old_locus_tag=D5F94_08305 NZ_QYTD01000012.1 Protein Homology CDS 77258 77965 . - 0 ID=cds-WP_000687006.1;Parent=gene-D5F94_RS08305;Dbxref=GenBank:WP_000687006.1;Name=WP_000687006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001871310.1;locus_tag=D5F94_RS08305;product=hypothetical protein;protein_id=WP_000687006.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 78157 78468 . + . ID=gene-D5F94_RS08310;Name=D5F94_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08310;old_locus_tag=D5F94_08310 NZ_QYTD01000012.1 Protein Homology CDS 78157 78468 . + 0 ID=cds-WP_000613124.1;Parent=gene-D5F94_RS08310;Dbxref=GenBank:WP_000613124.1;Name=WP_000613124.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613123.1;locus_tag=D5F94_RS08310;product=PadR family transcriptional regulator;protein_id=WP_000613124.1;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 78489 79172 . + . ID=gene-D5F94_RS08315;Name=D5F94_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08315;old_locus_tag=D5F94_08315 NZ_QYTD01000012.1 Protein Homology CDS 78489 79172 . + 0 ID=cds-WP_000359383.1;Parent=gene-D5F94_RS08315;Dbxref=GenBank:WP_000359383.1;Name=WP_000359383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502475.1;locus_tag=D5F94_RS08315;product=hypothetical protein;protein_id=WP_000359383.1;transl_table=11 NZ_QYTD01000012.1 RefSeq pseudogene 79449 80011 . + . ID=gene-D5F94_RS08320;Name=D5F94_RS08320;end_range=80011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS08320;old_locus_tag=D5F94_08320;partial=true;pseudo=true NZ_QYTD01000012.1 Protein Homology CDS 79449 80011 . + 0 ID=cds-D5F94_RS08320;Parent=gene-D5F94_RS08320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0140359;end_range=80011,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019787999.1;locus_tag=D5F94_RS08320;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_QYTD01000012.1 RefSeq gene 80055 80174 . - . ID=gene-D5F94_RS08325;Name=D5F94_RS08325;end_range=80174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08325;old_locus_tag=D5F94_08325;partial=true NZ_QYTD01000012.1 Protein Homology CDS 80055 80174 . - 0 ID=cds-WP_142997329.1;Parent=gene-D5F94_RS08325;Dbxref=GenBank:WP_142997329.1;Name=WP_142997329.1;Ontology_term=GO:0015074;end_range=80174,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS08325;partial=true;product=IS3 family transposase;protein_id=WP_142997329.1;transl_table=11 ##sequence-region NZ_QYTD01000013.1 1 30161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000013.1 RefSeq region 1 30161 . + . ID=NZ_QYTD01000013.1:1..30161;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000013.1 RefSeq pseudogene 1 290 . + . ID=gene-D5F94_RS08330;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=pseudogene;locus_tag=D5F94_RS08330;old_locus_tag=D5F94_08330;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000013.1 Protein Homology CDS 1 290 . + 0 ID=cds-D5F94_RS08330;Parent=gene-D5F94_RS08330;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.%3B frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770961.1;locus_tag=D5F94_RS08330;partial=true;product=dephospho-CoA kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 414 1115 . + . ID=gene-D5F94_RS08335;Name=D5F94_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08335;old_locus_tag=D5F94_08335 NZ_QYTD01000013.1 Protein Homology CDS 414 1115 . + 0 ID=cds-WP_000424347.1;Parent=gene-D5F94_RS08335;Dbxref=GenBank:WP_000424347.1;Name=WP_000424347.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424353.1;locus_tag=D5F94_RS08335;product=ABC transporter ATP-binding protein;protein_id=WP_000424347.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 1105 2751 . + . ID=gene-D5F94_RS08340;Name=D5F94_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08340;old_locus_tag=D5F94_08340 NZ_QYTD01000013.1 Protein Homology CDS 1105 2751 . + 0 ID=cds-WP_016503062.1;Parent=gene-D5F94_RS08340;Dbxref=GenBank:WP_016503062.1;Name=WP_016503062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200920.1;locus_tag=D5F94_RS08340;product=hypothetical protein;protein_id=WP_016503062.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 2947 4116 . + . ID=gene-D5F94_RS08345;Name=D5F94_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08345;old_locus_tag=D5F94_08345 NZ_QYTD01000013.1 Protein Homology CDS 2947 4116 . + 0 ID=cds-WP_015058682.1;Parent=gene-D5F94_RS08345;Dbxref=GenBank:WP_015058682.1;Name=WP_015058682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312381.1;locus_tag=D5F94_RS08345;product=multidrug efflux MFS transporter;protein_id=WP_015058682.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 4113 4259 . + . ID=gene-D5F94_RS08350;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D5F94_RS08350;old_locus_tag=D5F94_08350 NZ_QYTD01000013.1 Protein Homology CDS 4113 4259 . + 0 ID=cds-WP_001873241.1;Parent=gene-D5F94_RS08350;Dbxref=GenBank:WP_001873241.1;Name=WP_001873241.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803498.1;locus_tag=D5F94_RS08350;product=50S ribosomal protein L33;protein_id=WP_001873241.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 4306 4542 . + . ID=gene-D5F94_RS08355;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=D5F94_RS08355;old_locus_tag=D5F94_08355 NZ_QYTD01000013.1 Protein Homology CDS 4306 4542 . + 0 ID=cds-WP_000282513.1;Parent=gene-D5F94_RS08355;Dbxref=GenBank:WP_000282513.1;Name=WP_000282513.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282513.1;locus_tag=D5F94_RS08355;product=preprotein translocase subunit SecG;protein_id=WP_000282513.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 4655 7060 . + . ID=gene-D5F94_RS08360;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=D5F94_RS08360;old_locus_tag=D5F94_08360 NZ_QYTD01000013.1 Protein Homology CDS 4655 7060 . + 0 ID=cds-WP_016503061.1;Parent=gene-D5F94_RS08360;Dbxref=GenBank:WP_016503061.1;Name=WP_016503061.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659933.1;locus_tag=D5F94_RS08360;product=ribonuclease R;protein_id=WP_016503061.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 7063 7530 . + . ID=gene-D5F94_RS08365;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=D5F94_RS08365;old_locus_tag=D5F94_08365 NZ_QYTD01000013.1 Protein Homology CDS 7063 7530 . + 0 ID=cds-WP_000238456.1;Parent=gene-D5F94_RS08365;Dbxref=GenBank:WP_000238456.1;Name=WP_000238456.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894882.1;locus_tag=D5F94_RS08365;product=SsrA-binding protein SmpB;protein_id=WP_000238456.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 7614 9002 . - . ID=gene-D5F94_RS08370;Name=D5F94_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08370;old_locus_tag=D5F94_08370 NZ_QYTD01000013.1 Protein Homology CDS 7614 9002 . - 0 ID=cds-WP_000042126.1;Parent=gene-D5F94_RS08370;Dbxref=GenBank:WP_000042126.1;Name=WP_000042126.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042127.1;locus_tag=D5F94_RS08370;product=amino acid permease;protein_id=WP_000042126.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 9131 10057 . - . ID=gene-D5F94_RS08375;Name=D5F94_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08375;old_locus_tag=D5F94_08375 NZ_QYTD01000013.1 Protein Homology CDS 9131 10057 . - 0 ID=cds-WP_001196763.1;Parent=gene-D5F94_RS08375;Dbxref=GenBank:WP_001196763.1;Name=WP_001196763.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196765.1;locus_tag=D5F94_RS08375;product=glycosyltransferase family 2 protein;protein_id=WP_001196763.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 10186 10578 . - . ID=gene-D5F94_RS08380;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;gene_synonym=lguL;locus_tag=D5F94_RS08380;old_locus_tag=D5F94_08380 NZ_QYTD01000013.1 Protein Homology CDS 10186 10578 . - 0 ID=cds-WP_001116199.1;Parent=gene-D5F94_RS08380;Dbxref=GenBank:WP_001116199.1;Name=WP_001116199.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771619.1;locus_tag=D5F94_RS08380;product=lactoylglutathione lyase;protein_id=WP_001116199.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 10666 11340 . - . ID=gene-D5F94_RS08385;Name=D5F94_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08385;old_locus_tag=D5F94_08385 NZ_QYTD01000013.1 Protein Homology CDS 10666 11340 . - 0 ID=cds-WP_000159251.1;Parent=gene-D5F94_RS08385;Dbxref=GenBank:WP_000159251.1;Name=WP_000159251.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159250.1;locus_tag=D5F94_RS08385;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000159251.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 11607 12449 . + . ID=gene-D5F94_RS08390;Name=D5F94_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08390;old_locus_tag=D5F94_08390 NZ_QYTD01000013.1 Protein Homology CDS 11607 12449 . + 0 ID=cds-WP_000451355.1;Parent=gene-D5F94_RS08390;Dbxref=GenBank:WP_000451355.1;Name=WP_000451355.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058680.1;locus_tag=D5F94_RS08390;product=aldo/keto reductase;protein_id=WP_000451355.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 12639 13361 . + . ID=gene-D5F94_RS08395;Name=D5F94_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08395;old_locus_tag=D5F94_08395 NZ_QYTD01000013.1 Protein Homology CDS 12639 13361 . + 0 ID=cds-WP_016481044.1;Parent=gene-D5F94_RS08395;Dbxref=GenBank:WP_016481044.1;Name=WP_016481044.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234927.1;locus_tag=D5F94_RS08395;product=pseudouridine synthase;protein_id=WP_016481044.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 13446 15485 . + . ID=gene-D5F94_RS08400;Name=D5F94_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08400;old_locus_tag=D5F94_08400 NZ_QYTD01000013.1 Protein Homology CDS 13446 15485 . + 0 ID=cds-WP_016503060.1;Parent=gene-D5F94_RS08400;Dbxref=GenBank:WP_016503060.1;Name=WP_016503060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824614.1;locus_tag=D5F94_RS08400;product=amidase family protein;protein_id=WP_016503060.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 15595 16173 . + . ID=gene-D5F94_RS08405;Name=D5F94_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08405;old_locus_tag=D5F94_08405 NZ_QYTD01000013.1 Protein Homology CDS 15595 16173 . + 0 ID=cds-WP_001883402.1;Parent=gene-D5F94_RS08405;Dbxref=GenBank:WP_001883402.1;Name=WP_001883402.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865323.1;locus_tag=D5F94_RS08405;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_001883402.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 16208 17449 . - . ID=gene-D5F94_RS08410;Name=D5F94_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08410;old_locus_tag=D5F94_08410 NZ_QYTD01000013.1 Protein Homology CDS 16208 17449 . - 0 ID=cds-WP_000244046.1;Parent=gene-D5F94_RS08410;Dbxref=GenBank:WP_000244046.1;Name=WP_000244046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244044.1;locus_tag=D5F94_RS08410;product=aminopeptidase;protein_id=WP_000244046.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 17627 17755 . + . ID=gene-D5F94_RS08415;Name=D5F94_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08415;old_locus_tag=D5F94_08415 NZ_QYTD01000013.1 Protein Homology CDS 17627 17755 . + 0 ID=cds-WP_000863865.1;Parent=gene-D5F94_RS08415;Dbxref=GenBank:WP_000863865.1;Name=WP_000863865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863865.1;locus_tag=D5F94_RS08415;product=DUF4044 domain-containing protein;protein_id=WP_000863865.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 17816 19129 . + . ID=gene-D5F94_RS08420;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=D5F94_RS08420;old_locus_tag=D5F94_08420 NZ_QYTD01000013.1 Protein Homology CDS 17816 19129 . + 0 ID=cds-WP_016503057.1;Parent=gene-D5F94_RS08420;Dbxref=GenBank:WP_016503057.1;Name=WP_016503057.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984148.1;locus_tag=D5F94_RS08420;product=GTPase ObgE;protein_id=WP_016503057.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 19155 19313 . + . ID=gene-D5F94_RS08425;Name=D5F94_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08425;old_locus_tag=D5F94_08425 NZ_QYTD01000013.1 Protein Homology CDS 19155 19313 . + 0 ID=cds-WP_000502594.1;Parent=gene-D5F94_RS08425;Dbxref=GenBank:WP_000502594.1;Name=WP_000502594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502594.1;locus_tag=D5F94_RS08425;product=hypothetical protein;protein_id=WP_000502594.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 19406 19756 . - . ID=gene-D5F94_RS08430;Name=D5F94_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08430;old_locus_tag=D5F94_08430 NZ_QYTD01000013.1 Protein Homology CDS 19406 19756 . - 0 ID=cds-WP_124749565.1;Parent=gene-D5F94_RS08430;Dbxref=GenBank:WP_124749565.1;Name=WP_124749565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656279.1;locus_tag=D5F94_RS08430;product=hypothetical protein;protein_id=WP_124749565.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 19905 20645 . - . ID=gene-D5F94_RS08435;Name=D5F94_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08435;old_locus_tag=D5F94_08435 NZ_QYTD01000013.1 Protein Homology CDS 19905 20645 . - 0 ID=cds-WP_016481038.1;Parent=gene-D5F94_RS08435;Dbxref=GenBank:WP_016481038.1;Name=WP_016481038.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003107174.1;locus_tag=D5F94_RS08435;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_016481038.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 20645 22828 . - . ID=gene-D5F94_RS08440;Name=D5F94_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08440;old_locus_tag=D5F94_08440 NZ_QYTD01000013.1 Protein Homology CDS 20645 22828 . - 0 ID=cds-WP_124749567.1;Parent=gene-D5F94_RS08440;Dbxref=GenBank:WP_124749567.1;Name=WP_124749567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681008.1;locus_tag=D5F94_RS08440;product=ABC transporter substrate-binding protein/permease;protein_id=WP_124749567.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 23011 23931 . + . ID=gene-D5F94_RS08445;Name=D5F94_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08445;old_locus_tag=D5F94_08445 NZ_QYTD01000013.1 Protein Homology CDS 23011 23931 . + 0 ID=cds-WP_016481036.1;Parent=gene-D5F94_RS08445;Dbxref=GenBank:WP_016481036.1;Name=WP_016481036.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767142.1;locus_tag=D5F94_RS08445;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016481036.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 23992 25983 . + . ID=gene-D5F94_RS08450;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=D5F94_RS08450;old_locus_tag=D5F94_08450 NZ_QYTD01000013.1 Protein Homology CDS 23992 25983 . + 0 ID=cds-WP_124749568.1;Parent=gene-D5F94_RS08450;Dbxref=GenBank:WP_124749568.1;Name=WP_124749568.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002261961.1;locus_tag=D5F94_RS08450;product=excinuclease ABC subunit UvrB;protein_id=WP_124749568.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 26081 27574 . - . ID=gene-D5F94_RS08455;Name=D5F94_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08455;old_locus_tag=D5F94_08455 NZ_QYTD01000013.1 Protein Homology CDS 26081 27574 . - 0 ID=cds-WP_124749570.1;Parent=gene-D5F94_RS08455;Dbxref=GenBank:WP_124749570.1;Name=WP_124749570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646645.1;locus_tag=D5F94_RS08455;product=helix-turn-helix domain-containing protein;protein_id=WP_124749570.1;transl_table=11 NZ_QYTD01000013.1 RefSeq gene 27956 30161 . + . ID=gene-D5F94_RS08460;Name=srr1;end_range=30161,.;gbkey=Gene;gene=srr1;gene_biotype=protein_coding;locus_tag=D5F94_RS08460;old_locus_tag=D5F94_08460;partial=true NZ_QYTD01000013.1 Protein Homology CDS 27956 30161 . + 0 ID=cds-WP_124749572.1;Parent=gene-D5F94_RS08460;Dbxref=GenBank:WP_124749572.1;Name=WP_124749572.1;end_range=30161,.;gbkey=CDS;gene=srr1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078971.1;locus_tag=D5F94_RS08460;partial=true;product=serine-rich repeat glycoprotein adhesin Srr1;protein_id=WP_124749572.1;transl_table=11 ##sequence-region NZ_QYTD01000014.1 1 64753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000014.1 RefSeq region 1 64753 . + . ID=NZ_QYTD01000014.1:1..64753;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000014.1 RefSeq gene 1 106 . - . ID=gene-D5F94_RS08465;Name=D5F94_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08465;old_locus_tag=D5F94_08465;partial=true;start_range=.,1 NZ_QYTD01000014.1 Protein Homology CDS 1 106 . - 0 ID=cds-WP_025195086.1;Parent=gene-D5F94_RS08465;Dbxref=GenBank:WP_025195086.1;Name=WP_025195086.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS08465;partial=true;product=transposase;protein_id=WP_025195086.1;start_range=.,1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 354 833 . + . ID=gene-D5F94_RS08470;Name=D5F94_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08470;old_locus_tag=D5F94_08470 NZ_QYTD01000014.1 Protein Homology CDS 354 833 . + 0 ID=cds-WP_001204194.1;Parent=gene-D5F94_RS08470;Dbxref=GenBank:WP_001204194.1;Name=WP_001204194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204194.1;locus_tag=D5F94_RS08470;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_001204194.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 956 1648 . + . ID=gene-D5F94_RS08475;Name=D5F94_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08475;old_locus_tag=D5F94_08475 NZ_QYTD01000014.1 Protein Homology CDS 956 1648 . + 0 ID=cds-WP_000049272.1;Parent=gene-D5F94_RS08475;Dbxref=GenBank:WP_000049272.1;Name=WP_000049272.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049270.1;locus_tag=D5F94_RS08475;product=histidine phosphatase family protein;protein_id=WP_000049272.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 1645 2397 . + . ID=gene-D5F94_RS08480;Name=D5F94_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08480;old_locus_tag=D5F94_08480 NZ_QYTD01000014.1 Protein Homology CDS 1645 2397 . + 0 ID=cds-WP_000739663.1;Parent=gene-D5F94_RS08480;Dbxref=GenBank:WP_000739663.1;Name=WP_000739663.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739664.1;locus_tag=D5F94_RS08480;product=M15 family metallopeptidase;protein_id=WP_000739663.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 2394 2969 . + . ID=gene-D5F94_RS08485;Name=D5F94_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08485;old_locus_tag=D5F94_08485 NZ_QYTD01000014.1 Protein Homology CDS 2394 2969 . + 0 ID=cds-WP_001231504.1;Parent=gene-D5F94_RS08485;Dbxref=GenBank:WP_001231504.1;Name=WP_001231504.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767148.1;locus_tag=D5F94_RS08485;product=glycoside hydrolase family 73 protein;protein_id=WP_001231504.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 3112 4146 . + . ID=gene-D5F94_RS08490;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=D5F94_RS08490;old_locus_tag=D5F94_08490 NZ_QYTD01000014.1 Protein Homology CDS 3112 4146 . + 0 ID=cds-WP_001872861.1;Parent=gene-D5F94_RS08490;Dbxref=GenBank:WP_001872861.1;Name=WP_001872861.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015911815.1;locus_tag=D5F94_RS08490;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_001872861.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 4149 4721 . + . ID=gene-D5F94_RS08495;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=D5F94_RS08495;old_locus_tag=D5F94_08495 NZ_QYTD01000014.1 Protein Homology CDS 4149 4721 . + 0 ID=cds-WP_001872862.1;Parent=gene-D5F94_RS08495;Dbxref=GenBank:WP_001872862.1;Name=WP_001872862.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988583.1;locus_tag=D5F94_RS08495;product=nucleotide exchange factor GrpE;protein_id=WP_001872862.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 4902 6731 . + . ID=gene-D5F94_RS08500;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=D5F94_RS08500;old_locus_tag=D5F94_08500 NZ_QYTD01000014.1 Protein Homology CDS 4902 6731 . + 0 ID=cds-WP_029141027.1;Parent=gene-D5F94_RS08500;Dbxref=GenBank:WP_029141027.1;Name=WP_029141027.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=D5F94_RS08500;product=molecular chaperone DnaK;protein_id=WP_029141027.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 7020 8159 . + . ID=gene-D5F94_RS08505;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D5F94_RS08505;old_locus_tag=D5F94_08505 NZ_QYTD01000014.1 Protein Homology CDS 7020 8159 . + 0 ID=cds-WP_001066278.1;Parent=gene-D5F94_RS08505;Dbxref=GenBank:WP_001066278.1;Name=WP_001066278.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647541.1;locus_tag=D5F94_RS08505;product=molecular chaperone DnaJ;protein_id=WP_001066278.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 8272 9519 . + . ID=gene-D5F94_RS08510;Name=D5F94_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08510;old_locus_tag=D5F94_08510 NZ_QYTD01000014.1 Protein Homology CDS 8272 9519 . + 0 ID=cds-WP_000256866.1;Parent=gene-D5F94_RS08510;Dbxref=GenBank:WP_000256866.1;Name=WP_000256866.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058290.1;locus_tag=D5F94_RS08510;product=aminotransferase-like domain-containing protein;protein_id=WP_000256866.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 9590 10366 . + . ID=gene-D5F94_RS08515;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=D5F94_RS08515;old_locus_tag=D5F94_08515 NZ_QYTD01000014.1 Protein Homology CDS 9590 10366 . + 0 ID=cds-WP_000199161.1;Parent=gene-D5F94_RS08515;Dbxref=GenBank:WP_000199161.1;Name=WP_000199161.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058291.1;locus_tag=D5F94_RS08515;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000199161.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 10329 11087 . + . ID=gene-D5F94_RS08520;Name=D5F94_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08520;old_locus_tag=D5F94_08520 NZ_QYTD01000014.1 Protein Homology CDS 10329 11087 . + 0 ID=cds-WP_000857670.1;Parent=gene-D5F94_RS08520;Dbxref=GenBank:WP_000857670.1;Name=WP_000857670.1;Ontology_term=GO:0009228,GO:0008972;gbkey=CDS;go_function=phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857667.1;locus_tag=D5F94_RS08520;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000857670.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 11097 11561 . + . ID=gene-D5F94_RS08525;Name=D5F94_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08525;old_locus_tag=D5F94_08525 NZ_QYTD01000014.1 Protein Homology CDS 11097 11561 . + 0 ID=cds-WP_001224404.1;Parent=gene-D5F94_RS08525;Dbxref=GenBank:WP_001224404.1;Name=WP_001224404.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224404.1;locus_tag=D5F94_RS08525;product=ECF transporter S component;protein_id=WP_001224404.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 11558 12127 . + . ID=gene-D5F94_RS08530;Name=D5F94_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08530;old_locus_tag=D5F94_08530 NZ_QYTD01000014.1 Protein Homology CDS 11558 12127 . + 0 ID=cds-WP_000599671.1;Parent=gene-D5F94_RS08530;Dbxref=GenBank:WP_000599671.1;Name=WP_000599671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599673.1;locus_tag=D5F94_RS08530;product=TIGR01440 family protein;protein_id=WP_000599671.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 12164 13006 . - . ID=gene-D5F94_RS08535;Name=D5F94_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08535;old_locus_tag=D5F94_08535 NZ_QYTD01000014.1 Protein Homology CDS 12164 13006 . - 0 ID=cds-WP_016502404.1;Parent=gene-D5F94_RS08535;Dbxref=GenBank:WP_016502404.1;Name=WP_016502404.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502404.1;locus_tag=D5F94_RS08535;product=mechanosensitive ion channel family protein;protein_id=WP_016502404.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 13163 14446 . + . ID=gene-D5F94_RS08540;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=D5F94_RS08540;old_locus_tag=D5F94_08540 NZ_QYTD01000014.1 Protein Homology CDS 13163 14446 . + 0 ID=cds-WP_000107750.1;Parent=gene-D5F94_RS08540;Dbxref=GenBank:WP_000107750.1;Name=WP_000107750.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645628.1;locus_tag=D5F94_RS08540;product=trigger factor;protein_id=WP_000107750.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 14635 15210 . + . ID=gene-D5F94_RS08545;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=D5F94_RS08545;old_locus_tag=D5F94_08545 NZ_QYTD01000014.1 Protein Homology CDS 14635 15210 . + 0 ID=cds-WP_000418426.1;Parent=gene-D5F94_RS08545;Dbxref=GenBank:WP_000418426.1;Name=WP_000418426.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418426.1;locus_tag=D5F94_RS08545;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_000418426.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 15483 17087 . + . ID=gene-D5F94_RS08550;Name=D5F94_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08550;old_locus_tag=D5F94_08550 NZ_QYTD01000014.1 Protein Homology CDS 15483 17087 . + 0 ID=cds-WP_016502405.1;Parent=gene-D5F94_RS08550;Dbxref=GenBank:WP_016502405.1;Name=WP_016502405.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170438.1;locus_tag=D5F94_RS08550;product=CTP synthase;protein_id=WP_016502405.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 17196 18122 . + . ID=gene-D5F94_RS08555;Name=D5F94_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08555;old_locus_tag=D5F94_08555 NZ_QYTD01000014.1 Protein Homology CDS 17196 18122 . + 0 ID=cds-WP_000723853.1;Parent=gene-D5F94_RS08555;Dbxref=GenBank:WP_000723853.1;Name=WP_000723853.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723856.1;locus_tag=D5F94_RS08555;product=alpha/beta hydrolase;protein_id=WP_000723853.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 18169 18254 . + . ID=gene-D5F94_RS08560;Name=D5F94_RS08560;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS08560;old_locus_tag=D5F94_08560 NZ_QYTD01000014.1 tRNAscan-SE tRNA 18169 18254 . + . ID=rna-D5F94_RS08560;Parent=gene-D5F94_RS08560;anticodon=(pos:18203..18205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS08560;product=tRNA-Leu NZ_QYTD01000014.1 tRNAscan-SE exon 18169 18254 . + . ID=exon-D5F94_RS08560-1;Parent=rna-D5F94_RS08560;anticodon=(pos:18203..18205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS08560;product=tRNA-Leu NZ_QYTD01000014.1 RefSeq gene 18317 18763 . + . ID=gene-D5F94_RS08565;Name=D5F94_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08565;old_locus_tag=D5F94_08565 NZ_QYTD01000014.1 Protein Homology CDS 18317 18763 . + 0 ID=cds-WP_016502406.1;Parent=gene-D5F94_RS08565;Dbxref=GenBank:WP_016502406.1;Name=WP_016502406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049187.1;locus_tag=D5F94_RS08565;product=dUTP diphosphatase;protein_id=WP_016502406.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 18925 20289 . + . ID=gene-D5F94_RS08570;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=D5F94_RS08570;old_locus_tag=D5F94_08570 NZ_QYTD01000014.1 Protein Homology CDS 18925 20289 . + 0 ID=cds-WP_124749574.1;Parent=gene-D5F94_RS08570;Dbxref=GenBank:WP_124749574.1;Name=WP_124749574.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650544.1;locus_tag=D5F94_RS08570;product=DNA repair protein RadA;protein_id=WP_124749574.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 20425 20922 . + . ID=gene-D5F94_RS08575;Name=D5F94_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08575;old_locus_tag=D5F94_08575 NZ_QYTD01000014.1 Protein Homology CDS 20425 20922 . + 0 ID=cds-WP_000214743.1;Parent=gene-D5F94_RS08575;Dbxref=GenBank:WP_000214743.1;Name=WP_000214743.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643839.1;locus_tag=D5F94_RS08575;product=beta-class carbonic anhydrase;protein_id=WP_000214743.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 21076 22395 . + . ID=gene-D5F94_RS08580;Name=D5F94_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08580;old_locus_tag=D5F94_08580 NZ_QYTD01000014.1 Protein Homology CDS 21076 22395 . + 0 ID=cds-WP_000759711.1;Parent=gene-D5F94_RS08580;Dbxref=GenBank:WP_000759711.1;Name=WP_000759711.1;Ontology_term=GO:0045454,GO:0016668,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631733.1;locus_tag=D5F94_RS08580;product=FAD-containing oxidoreductase;protein_id=WP_000759711.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 22604 24058 . + . ID=gene-D5F94_RS08585;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=D5F94_RS08585;old_locus_tag=D5F94_08585 NZ_QYTD01000014.1 Protein Homology CDS 22604 24058 . + 0 ID=cds-WP_001284498.1;Parent=gene-D5F94_RS08585;Dbxref=GenBank:WP_001284498.1;Name=WP_001284498.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058297.1;locus_tag=D5F94_RS08585;product=glutamate--tRNA ligase;protein_id=WP_001284498.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 24098 25066 . - . ID=gene-D5F94_RS08590;Name=D5F94_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08590;old_locus_tag=D5F94_08590 NZ_QYTD01000014.1 Protein Homology CDS 24098 25066 . - 0 ID=cds-WP_000668258.1;Parent=gene-D5F94_RS08590;Dbxref=GenBank:WP_000668258.1;Name=WP_000668258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647360.1;locus_tag=D5F94_RS08590;product=substrate-binding domain-containing protein;protein_id=WP_000668258.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 25119 26060 . - . ID=gene-D5F94_RS08595;Name=D5F94_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08595;old_locus_tag=D5F94_08595 NZ_QYTD01000014.1 Protein Homology CDS 25119 26060 . - 0 ID=cds-WP_000794185.1;Parent=gene-D5F94_RS08595;Dbxref=GenBank:WP_000794185.1;Name=WP_000794185.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771495.1;locus_tag=D5F94_RS08595;product=ABC transporter permease subunit;protein_id=WP_000794185.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 26062 27540 . - . ID=gene-D5F94_RS08600;Name=D5F94_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08600;old_locus_tag=D5F94_08600 NZ_QYTD01000014.1 Protein Homology CDS 26062 27540 . - 0 ID=cds-WP_016502410.1;Parent=gene-D5F94_RS08600;Dbxref=GenBank:WP_016502410.1;Name=WP_016502410.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767714.1;locus_tag=D5F94_RS08600;product=sugar ABC transporter ATP-binding protein;protein_id=WP_016502410.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 27556 27954 . - . ID=gene-D5F94_RS08605;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=D5F94_RS08605;old_locus_tag=D5F94_08605 NZ_QYTD01000014.1 Protein Homology CDS 27556 27954 . - 0 ID=cds-WP_000750737.1;Parent=gene-D5F94_RS08605;Dbxref=GenBank:WP_000750737.1;Name=WP_000750737.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750742.1;locus_tag=D5F94_RS08605;product=D-ribose pyranase;protein_id=WP_000750737.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 27929 28840 . - . ID=gene-D5F94_RS08610;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=D5F94_RS08610;old_locus_tag=D5F94_08610 NZ_QYTD01000014.1 Protein Homology CDS 27929 28840 . - 0 ID=cds-WP_016502411.1;Parent=gene-D5F94_RS08610;Dbxref=GenBank:WP_016502411.1;Name=WP_016502411.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065863.1;locus_tag=D5F94_RS08610;product=ribokinase;protein_id=WP_016502411.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 28833 29819 . - . ID=gene-D5F94_RS08615;Name=D5F94_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08615;old_locus_tag=D5F94_08615 NZ_QYTD01000014.1 Protein Homology CDS 28833 29819 . - 0 ID=cds-WP_000104359.1;Parent=gene-D5F94_RS08615;Dbxref=GenBank:WP_000104359.1;Name=WP_000104359.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284954.1;locus_tag=D5F94_RS08615;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000104359.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 30001 31089 . + . ID=gene-D5F94_RS08625;Name=D5F94_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08625;old_locus_tag=D5F94_08625 NZ_QYTD01000014.1 Protein Homology CDS 30001 31089 . + 0 ID=cds-WP_000017575.1;Parent=gene-D5F94_RS08625;Dbxref=GenBank:WP_000017575.1;Name=WP_000017575.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631737.1;locus_tag=D5F94_RS08625;product=ABC transporter permease;protein_id=WP_000017575.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 31089 31775 . + . ID=gene-D5F94_RS08630;Name=D5F94_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08630;old_locus_tag=D5F94_08630 NZ_QYTD01000014.1 Protein Homology CDS 31089 31775 . + 0 ID=cds-WP_001274148.1;Parent=gene-D5F94_RS08630;Dbxref=GenBank:WP_001274148.1;Name=WP_001274148.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480208.1;locus_tag=D5F94_RS08630;product=ABC transporter ATP-binding protein;protein_id=WP_001274148.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 31806 32477 . + . ID=gene-D5F94_RS08635;Name=D5F94_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08635;old_locus_tag=D5F94_08635 NZ_QYTD01000014.1 Protein Homology CDS 31806 32477 . + 0 ID=cds-WP_000590686.1;Parent=gene-D5F94_RS08635;Dbxref=GenBank:WP_000590686.1;Name=WP_000590686.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590685.1;locus_tag=D5F94_RS08635;product=response regulator transcription factor;protein_id=WP_000590686.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 32461 33540 . + . ID=gene-D5F94_RS08640;Name=D5F94_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08640;old_locus_tag=D5F94_08640 NZ_QYTD01000014.1 Protein Homology CDS 32461 33540 . + 0 ID=cds-WP_180383421.1;Parent=gene-D5F94_RS08640;Dbxref=GenBank:WP_180383421.1;Name=WP_180383421.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771001.1;locus_tag=D5F94_RS08640;product=sensor histidine kinase;protein_id=WP_180383421.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 33694 34884 . + . ID=gene-D5F94_RS08645;Name=D5F94_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08645;old_locus_tag=D5F94_08645 NZ_QYTD01000014.1 Protein Homology CDS 33694 34884 . + 0 ID=cds-WP_016502414.1;Parent=gene-D5F94_RS08645;Dbxref=GenBank:WP_016502414.1;Name=WP_016502414.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514054.1;locus_tag=D5F94_RS08645;product=argininosuccinate synthase;protein_id=WP_016502414.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 34903 36291 . + . ID=gene-D5F94_RS08650;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=D5F94_RS08650;old_locus_tag=D5F94_08650 NZ_QYTD01000014.1 Protein Homology CDS 34903 36291 . + 0 ID=cds-WP_000164581.1;Parent=gene-D5F94_RS08650;Dbxref=GenBank:WP_000164581.1;Name=WP_000164581.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771691.1;locus_tag=D5F94_RS08650;product=argininosuccinate lyase;protein_id=WP_000164581.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 36432 37313 . + . ID=gene-D5F94_RS08655;Name=D5F94_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08655;old_locus_tag=D5F94_08655 NZ_QYTD01000014.1 Protein Homology CDS 36432 37313 . + 0 ID=cds-WP_001018987.1;Parent=gene-D5F94_RS08655;Dbxref=GenBank:WP_001018987.1;Name=WP_001018987.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184946.1;locus_tag=D5F94_RS08655;product=class II fructose-bisphosphate aldolase;protein_id=WP_001018987.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 37398 38315 . - . ID=gene-D5F94_RS08660;Name=D5F94_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08660;old_locus_tag=D5F94_08660 NZ_QYTD01000014.1 Protein Homology CDS 37398 38315 . - 0 ID=cds-WP_000197048.1;Parent=gene-D5F94_RS08660;Dbxref=GenBank:WP_000197048.1;Name=WP_000197048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197052.1;locus_tag=D5F94_RS08660;product=L-lactate dehydrogenase;protein_id=WP_000197048.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 38554 38742 . + . ID=gene-D5F94_RS08665;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=D5F94_RS08665;old_locus_tag=D5F94_08665 NZ_QYTD01000014.1 Protein Homology CDS 38554 38742 . + 0 ID=cds-WP_001140949.1;Parent=gene-D5F94_RS08665;Dbxref=GenBank:WP_001140949.1;Name=WP_001140949.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=D5F94_RS08665;product=50S ribosomal protein L28;protein_id=WP_001140949.1;transl_table=11 NZ_QYTD01000014.1 RefSeq pseudogene 38874 39240 . + . ID=gene-D5F94_RS08670;Name=D5F94_RS08670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS08670;old_locus_tag=D5F94_08670;pseudo=true NZ_QYTD01000014.1 Protein Homology CDS 38874 39240 . + 0 ID=cds-D5F94_RS08670;Parent=gene-D5F94_RS08670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018365170.1;locus_tag=D5F94_RS08670;product=Asp23/Gls24 family envelope stress response protein;pseudo=true;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 39240 40904 . + . ID=gene-D5F94_RS08675;Name=D5F94_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08675;old_locus_tag=D5F94_08675 NZ_QYTD01000014.1 Protein Homology CDS 39240 40904 . + 0 ID=cds-WP_000036700.1;Parent=gene-D5F94_RS08675;Dbxref=GenBank:WP_000036700.1;Name=WP_000036700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036699.1;locus_tag=D5F94_RS08675;product=DAK2 domain-containing protein;protein_id=WP_000036700.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 41052 41936 . + . ID=gene-D5F94_RS08680;Name=D5F94_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08680;old_locus_tag=D5F94_08680 NZ_QYTD01000014.1 Protein Homology CDS 41052 41936 . + 0 ID=cds-WP_000052520.1;Parent=gene-D5F94_RS08680;Dbxref=GenBank:WP_000052520.1;Name=WP_000052520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052515.1;locus_tag=D5F94_RS08680;product=SPFH domain-containing protein;protein_id=WP_000052520.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 42028 42144 . - . ID=gene-D5F94_RS08685;Name=D5F94_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08685;old_locus_tag=D5F94_08685 NZ_QYTD01000014.1 Protein Homology CDS 42028 42144 . - 0 ID=cds-WP_000818733.1;Parent=gene-D5F94_RS08685;Dbxref=GenBank:WP_000818733.1;Name=WP_000818733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818732.1;locus_tag=D5F94_RS08685;product=putative metal homeostasis protein;protein_id=WP_000818733.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 42511 42801 . - . ID=gene-D5F94_RS08690;Name=D5F94_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08690;old_locus_tag=D5F94_08690 NZ_QYTD01000014.1 Protein Homology CDS 42511 42801 . - 0 ID=cds-WP_000768370.1;Parent=gene-D5F94_RS08690;Dbxref=GenBank:WP_000768370.1;Name=WP_000768370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768368.1;locus_tag=D5F94_RS08690;product=hypothetical protein;protein_id=WP_000768370.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 43143 43883 . - . ID=gene-D5F94_RS08695;Name=D5F94_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08695;old_locus_tag=D5F94_08695 NZ_QYTD01000014.1 Protein Homology CDS 43143 43883 . - 0 ID=cds-WP_000189495.1;Parent=gene-D5F94_RS08695;Dbxref=GenBank:WP_000189495.1;Name=WP_000189495.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063284.1;locus_tag=D5F94_RS08695;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000189495.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 43893 45443 . - . ID=gene-D5F94_RS08700;Name=D5F94_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08700;old_locus_tag=D5F94_08700 NZ_QYTD01000014.1 Protein Homology CDS 43893 45443 . - 0 ID=cds-WP_000722381.1;Parent=gene-D5F94_RS08700;Dbxref=GenBank:WP_000722381.1;Name=WP_000722381.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722382.1;locus_tag=D5F94_RS08700;product=ABC transporter substrate-binding protein/permease;protein_id=WP_000722381.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 45579 47462 . + . ID=gene-D5F94_RS08705;Name=D5F94_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08705;old_locus_tag=D5F94_08705 NZ_QYTD01000014.1 Protein Homology CDS 45579 47462 . + 0 ID=cds-WP_086163184.1;Parent=gene-D5F94_RS08705;Dbxref=GenBank:WP_086163184.1;Name=WP_086163184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710501.1;locus_tag=D5F94_RS08705;product=DUF2207 domain-containing protein;protein_id=WP_086163184.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 47508 48347 . + . ID=gene-D5F94_RS08710;Name=D5F94_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08710;old_locus_tag=D5F94_08710 NZ_QYTD01000014.1 Protein Homology CDS 47508 48347 . + 0 ID=cds-WP_000905327.1;Parent=gene-D5F94_RS08710;Dbxref=GenBank:WP_000905327.1;Name=WP_000905327.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905329.1;locus_tag=D5F94_RS08710;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_000905327.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 48467 49222 . + . ID=gene-D5F94_RS08715;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=D5F94_RS08715;old_locus_tag=D5F94_08715 NZ_QYTD01000014.1 Protein Homology CDS 48467 49222 . + 0 ID=cds-WP_016502419.1;Parent=gene-D5F94_RS08715;Dbxref=GenBank:WP_016502419.1;Name=WP_016502419.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425372.1;locus_tag=D5F94_RS08715;product=adaptor protein MecA;protein_id=WP_016502419.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 49224 50384 . + . ID=gene-D5F94_RS08720;Name=D5F94_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08720;old_locus_tag=D5F94_08720 NZ_QYTD01000014.1 Protein Homology CDS 49224 50384 . + 0 ID=cds-WP_000612108.1;Parent=gene-D5F94_RS08720;Dbxref=GenBank:WP_000612108.1;Name=WP_000612108.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612108.1;locus_tag=D5F94_RS08720;product=glycosyltransferase family 4 protein;protein_id=WP_000612108.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 50549 51319 . + . ID=gene-D5F94_RS08725;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=D5F94_RS08725;old_locus_tag=D5F94_08725 NZ_QYTD01000014.1 Protein Homology CDS 50549 51319 . + 0 ID=cds-WP_000114502.1;Parent=gene-D5F94_RS08725;Dbxref=GenBank:WP_000114502.1;Name=WP_000114502.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114500.1;locus_tag=D5F94_RS08725;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000114502.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 51356 52618 . + . ID=gene-D5F94_RS08730;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=D5F94_RS08730;old_locus_tag=D5F94_08730 NZ_QYTD01000014.1 Protein Homology CDS 51356 52618 . + 0 ID=cds-WP_086163185.1;Parent=gene-D5F94_RS08730;Dbxref=GenBank:WP_086163185.1;Name=WP_086163185.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019805197.1;locus_tag=D5F94_RS08730;product=Fe-S cluster assembly protein SufD;protein_id=WP_086163185.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 52620 53852 . + . ID=gene-D5F94_RS08735;Name=D5F94_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08735;old_locus_tag=D5F94_08735 NZ_QYTD01000014.1 Protein Homology CDS 52620 53852 . + 0 ID=cds-WP_016502421.1;Parent=gene-D5F94_RS08735;Dbxref=GenBank:WP_016502421.1;Name=WP_016502421.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173342.1;locus_tag=D5F94_RS08735;product=cysteine desulfurase;protein_id=WP_016502421.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 53839 54282 . + . ID=gene-D5F94_RS08740;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=D5F94_RS08740;old_locus_tag=D5F94_08740 NZ_QYTD01000014.1 Protein Homology CDS 53839 54282 . + 0 ID=cds-WP_001218456.1;Parent=gene-D5F94_RS08740;Dbxref=GenBank:WP_001218456.1;Name=WP_001218456.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218456.1;locus_tag=D5F94_RS08740;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_001218456.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 54382 55800 . + . ID=gene-D5F94_RS08745;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=D5F94_RS08745;old_locus_tag=D5F94_08745 NZ_QYTD01000014.1 Protein Homology CDS 54382 55800 . + 0 ID=cds-WP_001289834.1;Parent=gene-D5F94_RS08745;Dbxref=GenBank:WP_001289834.1;Name=WP_001289834.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769002.1;locus_tag=D5F94_RS08745;product=Fe-S cluster assembly protein SufB;protein_id=WP_001289834.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 55871 57052 . - . ID=gene-D5F94_RS08750;Name=D5F94_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08750;old_locus_tag=D5F94_08750 NZ_QYTD01000014.1 Protein Homology CDS 55871 57052 . - 0 ID=cds-WP_124749026.1;Parent=gene-D5F94_RS08750;Dbxref=GenBank:WP_124749026.1;Name=WP_124749026.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125231.1;locus_tag=D5F94_RS08750;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_124749026.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 57204 58439 . - . ID=gene-D5F94_RS08755;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=D5F94_RS08755;old_locus_tag=D5F94_08755 NZ_QYTD01000014.1 Protein Homology CDS 57204 58439 . - 0 ID=cds-WP_086163187.1;Parent=gene-D5F94_RS08755;Dbxref=GenBank:WP_086163187.1;Name=WP_086163187.1;gbkey=CDS;gene=pbp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720947.1;locus_tag=D5F94_RS08755;product=D-alanyl-D-alanine carboxypeptidase PBP3;protein_id=WP_086163187.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 58670 60325 . + . ID=gene-D5F94_RS08760;Name=D5F94_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08760;old_locus_tag=D5F94_08760 NZ_QYTD01000014.1 Protein Homology CDS 58670 60325 . + 0 ID=cds-WP_016502424.1;Parent=gene-D5F94_RS08760;Dbxref=GenBank:WP_016502424.1;Name=WP_016502424.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644211.1;locus_tag=D5F94_RS08760;product=peptide ABC transporter substrate-binding protein;protein_id=WP_016502424.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 60444 61358 . + . ID=gene-D5F94_RS08765;Name=D5F94_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08765;old_locus_tag=D5F94_08765 NZ_QYTD01000014.1 Protein Homology CDS 60444 61358 . + 0 ID=cds-WP_000598964.1;Parent=gene-D5F94_RS08765;Dbxref=GenBank:WP_000598964.1;Name=WP_000598964.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598968.1;locus_tag=D5F94_RS08765;product=ABC transporter permease;protein_id=WP_000598964.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 61368 62399 . + . ID=gene-D5F94_RS08770;Name=D5F94_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08770;old_locus_tag=D5F94_08770 NZ_QYTD01000014.1 Protein Homology CDS 61368 62399 . + 0 ID=cds-WP_016480224.1;Parent=gene-D5F94_RS08770;Dbxref=GenBank:WP_016480224.1;Name=WP_016480224.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764054.1;locus_tag=D5F94_RS08770;product=ABC transporter permease;protein_id=WP_016480224.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 62412 63458 . + . ID=gene-D5F94_RS08775;Name=D5F94_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08775;old_locus_tag=D5F94_08775 NZ_QYTD01000014.1 Protein Homology CDS 62412 63458 . + 0 ID=cds-WP_086163189.1;Parent=gene-D5F94_RS08775;Dbxref=GenBank:WP_086163189.1;Name=WP_086163189.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410286.1;locus_tag=D5F94_RS08775;product=ABC transporter ATP-binding protein;protein_id=WP_086163189.1;transl_table=11 NZ_QYTD01000014.1 RefSeq gene 63458 64390 . + . ID=gene-D5F94_RS08780;Name=D5F94_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08780;old_locus_tag=D5F94_08780 NZ_QYTD01000014.1 Protein Homology CDS 63458 64390 . + 0 ID=cds-WP_000138506.1;Parent=gene-D5F94_RS08780;Dbxref=GenBank:WP_000138506.1;Name=WP_000138506.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138505.1;locus_tag=D5F94_RS08780;product=ABC transporter ATP-binding protein;protein_id=WP_000138506.1;transl_table=11 ##sequence-region NZ_QYTD01000015.1 1 43116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000015.1 RefSeq region 1 43116 . + . ID=NZ_QYTD01000015.1:1..43116;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000015.1 RefSeq pseudogene 118 2646 . + . ID=gene-D5F94_RS08790;Name=D5F94_RS08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS08790;old_locus_tag=D5F94_08790;partial=true;pseudo=true;start_range=.,118 NZ_QYTD01000015.1 Protein Homology CDS 118 2646 . + 0 ID=cds-D5F94_RS08790;Parent=gene-D5F94_RS08790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272937.1;locus_tag=D5F94_RS08790;partial=true;product=phage tail tip lysozyme;pseudo=true;start_range=.,118;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 2674 3309 . + . ID=gene-D5F94_RS08795;Name=D5F94_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08795;old_locus_tag=D5F94_08795 NZ_QYTD01000015.1 Protein Homology CDS 2674 3309 . + 0 ID=cds-WP_180383438.1;Parent=gene-D5F94_RS08795;Dbxref=GenBank:WP_180383438.1;Name=WP_180383438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644985.1;locus_tag=D5F94_RS08795;product=hypothetical protein;protein_id=WP_180383438.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 3306 3578 . + . ID=gene-D5F94_RS08800;Name=D5F94_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08800;old_locus_tag=D5F94_08800 NZ_QYTD01000015.1 Protein Homology CDS 3306 3578 . + 0 ID=cds-WP_037580874.1;Parent=gene-D5F94_RS08800;Dbxref=GenBank:WP_037580874.1;Name=WP_037580874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167343.1;locus_tag=D5F94_RS08800;product=hypothetical protein;protein_id=WP_037580874.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 3532 4374 . + . ID=gene-D5F94_RS08805;Name=D5F94_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08805;old_locus_tag=D5F94_08805 NZ_QYTD01000015.1 Protein Homology CDS 3532 4374 . + 0 ID=cds-WP_124749578.1;Parent=gene-D5F94_RS08805;Dbxref=GenBank:WP_124749578.1;Name=WP_124749578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286085.1;locus_tag=D5F94_RS08805;product=hypothetical protein;protein_id=WP_124749578.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 4387 4905 . + . ID=gene-D5F94_RS08810;Name=D5F94_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08810;old_locus_tag=D5F94_08810 NZ_QYTD01000015.1 Protein Homology CDS 4387 4905 . + 0 ID=cds-WP_124749579.1;Parent=gene-D5F94_RS08810;Dbxref=GenBank:WP_124749579.1;Name=WP_124749579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088851.1;locus_tag=D5F94_RS08810;product=hypothetical protein;protein_id=WP_124749579.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 4902 6698 . + . ID=gene-D5F94_RS08815;Name=D5F94_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08815;old_locus_tag=D5F94_08815 NZ_QYTD01000015.1 Protein Homology CDS 4902 6698 . + 0 ID=cds-WP_124749581.1;Parent=gene-D5F94_RS08815;Dbxref=GenBank:WP_124749581.1;Name=WP_124749581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197180.1;locus_tag=D5F94_RS08815;product=VirD4-like conjugal transfer protein%2C CD1115 family;protein_id=WP_124749581.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 6723 6977 . + . ID=gene-D5F94_RS08820;Name=D5F94_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08820;old_locus_tag=D5F94_08820 NZ_QYTD01000015.1 Protein Homology CDS 6723 6977 . + 0 ID=cds-WP_124749599.1;Parent=gene-D5F94_RS08820;Dbxref=GenBank:WP_124749599.1;Name=WP_124749599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794519.1;locus_tag=D5F94_RS08820;product=hypothetical protein;protein_id=WP_124749599.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 6979 10110 . + . ID=gene-D5F94_RS08825;Name=D5F94_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08825;old_locus_tag=D5F94_08825 NZ_QYTD01000015.1 Protein Homology CDS 6979 10110 . + 0 ID=cds-WP_124749583.1;Parent=gene-D5F94_RS08825;Dbxref=GenBank:WP_124749583.1;Name=WP_124749583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268907.1;locus_tag=D5F94_RS08825;product=PBECR4 domain-containing protein;protein_id=WP_124749583.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 10181 10618 . + . ID=gene-D5F94_RS08830;Name=D5F94_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08830;old_locus_tag=D5F94_08830 NZ_QYTD01000015.1 Protein Homology CDS 10181 10618 . + 0 ID=cds-WP_124749585.1;Parent=gene-D5F94_RS08830;Dbxref=GenBank:WP_124749585.1;Name=WP_124749585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008174.1;locus_tag=D5F94_RS08830;product=hypothetical protein;protein_id=WP_124749585.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 10802 11197 . + . ID=gene-D5F94_RS08835;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=D5F94_RS08835;old_locus_tag=D5F94_08835 NZ_QYTD01000015.1 Protein Homology CDS 10802 11197 . + 0 ID=cds-WP_124749587.1;Parent=gene-D5F94_RS08835;Dbxref=GenBank:WP_124749587.1;Name=WP_124749587.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378818.1;locus_tag=D5F94_RS08835;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_124749587.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 11191 12837 . + . ID=gene-D5F94_RS08840;Name=D5F94_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08840;old_locus_tag=D5F94_08840 NZ_QYTD01000015.1 Protein Homology CDS 11191 12837 . + 0 ID=cds-WP_124749589.1;Parent=gene-D5F94_RS08840;Dbxref=GenBank:WP_124749589.1;Name=WP_124749589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017794515.1;locus_tag=D5F94_RS08840;product=helical hairpin domain-containing protein;protein_id=WP_124749589.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 12852 13451 . + . ID=gene-D5F94_RS08845;Name=D5F94_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08845;old_locus_tag=D5F94_08845 NZ_QYTD01000015.1 Protein Homology CDS 12852 13451 . + 0 ID=cds-WP_124749591.1;Parent=gene-D5F94_RS08845;Dbxref=GenBank:WP_124749591.1;Name=WP_124749591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020213.1;locus_tag=D5F94_RS08845;product=hypothetical protein;protein_id=WP_124749591.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 13546 13725 . + . ID=gene-D5F94_RS08850;Name=D5F94_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08850;old_locus_tag=D5F94_08850 NZ_QYTD01000015.1 Protein Homology CDS 13546 13725 . + 0 ID=cds-WP_000520534.1;Parent=gene-D5F94_RS08850;Dbxref=GenBank:WP_000520534.1;Name=WP_000520534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520534.1;locus_tag=D5F94_RS08850;product=DUF7679 family protein;protein_id=WP_000520534.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 13891 15177 . + . ID=gene-D5F94_RS08855;Name=D5F94_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08855;old_locus_tag=D5F94_08855 NZ_QYTD01000015.1 Protein Homology CDS 13891 15177 . + 0 ID=cds-WP_180383432.1;Parent=gene-D5F94_RS08855;Dbxref=GenBank:WP_180383432.1;Name=WP_180383432.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768291.1;locus_tag=D5F94_RS08855;product=ISLre2 family transposase;protein_id=WP_180383432.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 15678 16154 . + . ID=gene-D5F94_RS08860;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=D5F94_RS08860;old_locus_tag=D5F94_08860 NZ_QYTD01000015.1 Protein Homology CDS 15678 16154 . + 0 ID=cds-WP_124749593.1;Parent=gene-D5F94_RS08860;Dbxref=GenBank:WP_124749593.1;Name=WP_124749593.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018366632.1;locus_tag=D5F94_RS08860;product=ribosome maturation factor RimP;protein_id=WP_124749593.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 16190 17341 . + . ID=gene-D5F94_RS08865;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=D5F94_RS08865;old_locus_tag=D5F94_08865 NZ_QYTD01000015.1 Protein Homology CDS 16190 17341 . + 0 ID=cds-WP_000032295.1;Parent=gene-D5F94_RS08865;Dbxref=GenBank:WP_000032295.1;Name=WP_000032295.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032296.1;locus_tag=D5F94_RS08865;product=transcription termination factor NusA;protein_id=WP_000032295.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 17363 17659 . + . ID=gene-D5F94_RS08870;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=D5F94_RS08870;old_locus_tag=D5F94_08870 NZ_QYTD01000015.1 Protein Homology CDS 17363 17659 . + 0 ID=cds-WP_001140526.1;Parent=gene-D5F94_RS08870;Dbxref=GenBank:WP_001140526.1;Name=WP_001140526.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006531117.1;locus_tag=D5F94_RS08870;product=RNase P modulator RnpM;protein_id=WP_001140526.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 17652 17954 . + . ID=gene-D5F94_RS08875;Name=D5F94_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08875;old_locus_tag=D5F94_08875 NZ_QYTD01000015.1 Protein Homology CDS 17652 17954 . + 0 ID=cds-WP_001065560.1;Parent=gene-D5F94_RS08875;Dbxref=GenBank:WP_001065560.1;Name=WP_001065560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065560.1;locus_tag=D5F94_RS08875;product=YlxQ-related RNA-binding protein;protein_id=WP_001065560.1;transl_table=11 NZ_QYTD01000015.1 RefSeq pseudogene 17974 18126 . + . ID=gene-D5F94_RS10805;Name=D5F94_RS10805;end_range=18126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10805;partial=true;pseudo=true NZ_QYTD01000015.1 Protein Homology CDS 17974 18126 . + 0 ID=cds-D5F94_RS10805;Parent=gene-D5F94_RS10805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767488.1;locus_tag=D5F94_RS10805;partial=true;product=translation initiation factor IF-2 N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000015.1 RefSeq pseudogene 18250 20757 . + . ID=gene-D5F94_RS08880;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=D5F94_RS08880;old_locus_tag=D5F94_08880;partial=true;pseudo=true;start_range=.,18250 NZ_QYTD01000015.1 Protein Homology CDS 18250 20757 . + 0 ID=cds-D5F94_RS08880;Parent=gene-D5F94_RS08880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381344.1;locus_tag=D5F94_RS08880;partial=true;product=translation initiation factor IF-2;pseudo=true;start_range=.,18250;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 20866 21216 . + . ID=gene-D5F94_RS08885;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=D5F94_RS08885;old_locus_tag=D5F94_08885 NZ_QYTD01000015.1 Protein Homology CDS 20866 21216 . + 0 ID=cds-WP_001273670.1;Parent=gene-D5F94_RS08885;Dbxref=GenBank:WP_001273670.1;Name=WP_001273670.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273670.1;locus_tag=D5F94_RS08885;product=30S ribosome-binding factor RbfA;protein_id=WP_001273670.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 21301 22305 . - . ID=gene-D5F94_RS08890;Name=D5F94_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08890;old_locus_tag=D5F94_08890 NZ_QYTD01000015.1 Protein Homology CDS 21301 22305 . - 0 ID=cds-WP_124749595.1;Parent=gene-D5F94_RS08890;Dbxref=GenBank:WP_124749595.1;Name=WP_124749595.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649252.1;locus_tag=D5F94_RS08890;product=alpha/beta hydrolase;protein_id=WP_124749595.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 22468 22884 . + . ID=gene-D5F94_RS08895;Name=D5F94_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08895;old_locus_tag=D5F94_08895 NZ_QYTD01000015.1 Protein Homology CDS 22468 22884 . + 0 ID=cds-WP_016502544.1;Parent=gene-D5F94_RS08895;Dbxref=GenBank:WP_016502544.1;Name=WP_016502544.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647024.1;locus_tag=D5F94_RS08895;product=CopY/TcrY family copper transport repressor;protein_id=WP_016502544.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 22897 25131 . + . ID=gene-D5F94_RS08900;Name=D5F94_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08900;old_locus_tag=D5F94_08900 NZ_QYTD01000015.1 Protein Homology CDS 22897 25131 . + 0 ID=cds-WP_086163234.1;Parent=gene-D5F94_RS08900;Dbxref=GenBank:WP_086163234.1;Name=WP_086163234.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013403.1;locus_tag=D5F94_RS08900;product=heavy metal translocating P-type ATPase;protein_id=WP_086163234.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 25172 25378 . + . ID=gene-D5F94_RS08905;Name=D5F94_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08905;old_locus_tag=D5F94_08905 NZ_QYTD01000015.1 Protein Homology CDS 25172 25378 . + 0 ID=cds-WP_016502547.1;Parent=gene-D5F94_RS08905;Dbxref=GenBank:WP_016502547.1;Name=WP_016502547.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683378.1;locus_tag=D5F94_RS08905;product=heavy-metal-associated domain-containing protein;protein_id=WP_016502547.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 25488 26102 . + . ID=gene-D5F94_RS08910;Name=D5F94_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08910;old_locus_tag=D5F94_08910 NZ_QYTD01000015.1 Protein Homology CDS 25488 26102 . + 0 ID=cds-WP_016502548.1;Parent=gene-D5F94_RS08910;Dbxref=GenBank:WP_016502548.1;Name=WP_016502548.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020717.1;locus_tag=D5F94_RS08910;product=trimeric intracellular cation channel family protein;protein_id=WP_016502548.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 26117 26929 . + . ID=gene-D5F94_RS08915;Name=D5F94_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08915;old_locus_tag=D5F94_08915 NZ_QYTD01000015.1 Protein Homology CDS 26117 26929 . + 0 ID=cds-WP_000593333.1;Parent=gene-D5F94_RS08915;Dbxref=GenBank:WP_000593333.1;Name=WP_000593333.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593337.1;locus_tag=D5F94_RS08915;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000593333.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 27042 29684 . + . ID=gene-D5F94_RS08920;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=D5F94_RS08920;old_locus_tag=D5F94_08920 NZ_QYTD01000015.1 Protein Homology CDS 27042 29684 . + 0 ID=cds-WP_016502549.1;Parent=gene-D5F94_RS08920;Dbxref=GenBank:WP_016502549.1;Name=WP_016502549.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019314525.1;locus_tag=D5F94_RS08920;product=DNA polymerase I;protein_id=WP_016502549.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 29714 30154 . + . ID=gene-D5F94_RS08925;Name=D5F94_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08925;old_locus_tag=D5F94_08925 NZ_QYTD01000015.1 Protein Homology CDS 29714 30154 . + 0 ID=cds-WP_000262488.1;Parent=gene-D5F94_RS08925;Dbxref=GenBank:WP_000262488.1;Name=WP_000262488.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262488.1;locus_tag=D5F94_RS08925;product=CoA-binding protein;protein_id=WP_000262488.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 30236 30715 . + . ID=gene-D5F94_RS08930;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=D5F94_RS08930;old_locus_tag=D5F94_08930 NZ_QYTD01000015.1 Protein Homology CDS 30236 30715 . + 0 ID=cds-WP_000377090.1;Parent=gene-D5F94_RS08930;Dbxref=GenBank:WP_000377090.1;Name=WP_000377090.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377090.1;locus_tag=D5F94_RS08930;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_000377090.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 30868 32433 . + . ID=gene-D5F94_RS08935;Name=pbsP;gbkey=Gene;gene=pbsP;gene_biotype=protein_coding;locus_tag=D5F94_RS08935;old_locus_tag=D5F94_08935 NZ_QYTD01000015.1 Protein Homology CDS 30868 32433 . + 0 ID=cds-WP_086163236.1;Parent=gene-D5F94_RS08935;Dbxref=GenBank:WP_086163236.1;Name=WP_086163236.1;gbkey=CDS;gene=pbsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703866.1;locus_tag=D5F94_RS08935;product=plasminogen-binding protein PbsP;protein_id=WP_086163236.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 32546 33232 . + . ID=gene-D5F94_RS08940;Name=D5F94_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08940;old_locus_tag=D5F94_08940 NZ_QYTD01000015.1 Protein Homology CDS 32546 33232 . + 0 ID=cds-WP_000192298.1;Parent=gene-D5F94_RS08940;Dbxref=GenBank:WP_000192298.1;Name=WP_000192298.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631698.1;locus_tag=D5F94_RS08940;product=response regulator transcription factor;protein_id=WP_000192298.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 33234 34271 . + . ID=gene-D5F94_RS08945;Name=D5F94_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08945;old_locus_tag=D5F94_08945 NZ_QYTD01000015.1 Protein Homology CDS 33234 34271 . + 0 ID=cds-WP_000770244.1;Parent=gene-D5F94_RS08945;Dbxref=GenBank:WP_000770244.1;Name=WP_000770244.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770238.1;locus_tag=D5F94_RS08945;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_000770244.1;transl_table=11 NZ_QYTD01000015.1 RefSeq pseudogene 34285 35026 . - . ID=gene-D5F94_RS08950;Name=D5F94_RS08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS08950;old_locus_tag=D5F94_08950;pseudo=true NZ_QYTD01000015.1 Protein Homology CDS 34285 35026 . - 0 ID=cds-D5F94_RS08950;Parent=gene-D5F94_RS08950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631700.1;locus_tag=D5F94_RS08950;product=DUF975 family protein;pseudo=true;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 35213 36355 . + . ID=gene-D5F94_RS08955;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=D5F94_RS08955;old_locus_tag=D5F94_08955 NZ_QYTD01000015.1 Protein Homology CDS 35213 36355 . + 0 ID=cds-WP_000129511.1;Parent=gene-D5F94_RS08955;Dbxref=GenBank:WP_000129511.1;Name=WP_000129511.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184131.1;locus_tag=D5F94_RS08955;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000129511.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 36461 36772 . + . ID=gene-D5F94_RS08960;Name=D5F94_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08960;old_locus_tag=D5F94_08960 NZ_QYTD01000015.1 Protein Homology CDS 36461 36772 . + 0 ID=cds-WP_165851450.1;Parent=gene-D5F94_RS08960;Dbxref=GenBank:WP_165851450.1;Name=WP_165851450.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983195.1;locus_tag=D5F94_RS08960;product=CHY zinc finger protein;protein_id=WP_165851450.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 36779 37318 . + . ID=gene-D5F94_RS08965;Name=D5F94_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08965;old_locus_tag=D5F94_08965 NZ_QYTD01000015.1 Protein Homology CDS 36779 37318 . + 0 ID=cds-WP_000469147.1;Parent=gene-D5F94_RS08965;Dbxref=GenBank:WP_000469147.1;Name=WP_000469147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469150.1;locus_tag=D5F94_RS08965;product=biotin transporter BioY;protein_id=WP_000469147.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 37457 38233 . + . ID=gene-D5F94_RS08970;Name=D5F94_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08970;old_locus_tag=D5F94_08970 NZ_QYTD01000015.1 Protein Homology CDS 37457 38233 . + 0 ID=cds-WP_000779461.1;Parent=gene-D5F94_RS08970;Dbxref=GenBank:WP_000779461.1;Name=WP_000779461.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932415.1;locus_tag=D5F94_RS08970;product=MBL fold metallo-hydrolase;protein_id=WP_000779461.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 38233 38739 . + . ID=gene-D5F94_RS08975;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=D5F94_RS08975;old_locus_tag=D5F94_08975 NZ_QYTD01000015.1 Protein Homology CDS 38233 38739 . + 0 ID=cds-WP_016502553.1;Parent=gene-D5F94_RS08975;Dbxref=GenBank:WP_016502553.1;Name=WP_016502553.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169006.1;locus_tag=D5F94_RS08975;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_016502553.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 38774 38859 . + . ID=gene-D5F94_RS08980;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=D5F94_RS08980;old_locus_tag=D5F94_08980 NZ_QYTD01000015.1 cmsearch SRP_RNA 38774 38859 . + . ID=rna-D5F94_RS08980;Parent=gene-D5F94_RS08980;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS08980;product=signal recognition particle sRNA small type NZ_QYTD01000015.1 cmsearch exon 38774 38859 . + . ID=exon-D5F94_RS08980-1;Parent=rna-D5F94_RS08980;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS08980;product=signal recognition particle sRNA small type NZ_QYTD01000015.1 RefSeq gene 39011 40360 . + . ID=gene-D5F94_RS08985;Name=D5F94_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08985;old_locus_tag=D5F94_08985 NZ_QYTD01000015.1 Protein Homology CDS 39011 40360 . + 0 ID=cds-WP_000148892.1;Parent=gene-D5F94_RS08985;Dbxref=GenBank:WP_000148892.1;Name=WP_000148892.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648691.1;locus_tag=D5F94_RS08985;product=glucose-6-phosphate isomerase;protein_id=WP_000148892.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 40683 41210 . + . ID=gene-D5F94_RS08990;Name=D5F94_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08990;old_locus_tag=D5F94_08990 NZ_QYTD01000015.1 Protein Homology CDS 40683 41210 . + 0 ID=cds-WP_124749597.1;Parent=gene-D5F94_RS08990;Dbxref=GenBank:WP_124749597.1;Name=WP_124749597.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058375.1;locus_tag=D5F94_RS08990;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_124749597.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 41201 41878 . + . ID=gene-D5F94_RS08995;Name=D5F94_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS08995;old_locus_tag=D5F94_08995 NZ_QYTD01000015.1 Protein Homology CDS 41201 41878 . + 0 ID=cds-WP_016502554.1;Parent=gene-D5F94_RS08995;Dbxref=GenBank:WP_016502554.1;Name=WP_016502554.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480347.1;locus_tag=D5F94_RS08995;product=rhomboid family intramembrane serine protease;protein_id=WP_016502554.1;transl_table=11 NZ_QYTD01000015.1 RefSeq gene 42010 43053 . + . ID=gene-D5F94_RS09000;Name=D5F94_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09000;old_locus_tag=D5F94_09000 NZ_QYTD01000015.1 Protein Homology CDS 42010 43053 . + 0 ID=cds-WP_016502555.1;Parent=gene-D5F94_RS09000;Dbxref=GenBank:WP_016502555.1;Name=WP_016502555.1;Ontology_term=GO:0016020,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019315854.1;locus_tag=D5F94_RS09000;product=BMP family lipoprotein;protein_id=WP_016502555.1;transl_table=11 ##sequence-region NZ_QYTD01000016.1 1 75755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000016.1 RefSeq region 1 75755 . + . ID=NZ_QYTD01000016.1:1..75755;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000016.1 RefSeq pseudogene 1 160 . - . ID=gene-D5F94_RS09005;Name=D5F94_RS09005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09005;old_locus_tag=D5F94_09005;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000016.1 Protein Homology CDS 1 160 . - 0 ID=cds-D5F94_RS09005;Parent=gene-D5F94_RS09005;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS09005;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 404 1180 . - . ID=gene-D5F94_RS09010;Name=D5F94_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09010;old_locus_tag=D5F94_09010 NZ_QYTD01000016.1 Protein Homology CDS 404 1180 . - 0 ID=cds-WP_000919190.1;Parent=gene-D5F94_RS09010;Dbxref=GenBank:WP_000919190.1;Name=WP_000919190.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919193.1;locus_tag=D5F94_RS09010;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000919190.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 1389 1862 . + . ID=gene-D5F94_RS09015;Name=D5F94_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09015;old_locus_tag=D5F94_09015 NZ_QYTD01000016.1 Protein Homology CDS 1389 1862 . + 0 ID=cds-WP_000458427.1;Parent=gene-D5F94_RS09015;Dbxref=GenBank:WP_000458427.1;Name=WP_000458427.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649570.1;locus_tag=D5F94_RS09015;product=PTS sugar transporter subunit IIA;protein_id=WP_000458427.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 1864 2169 . + . ID=gene-D5F94_RS09020;Name=D5F94_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09020;old_locus_tag=D5F94_09020 NZ_QYTD01000016.1 Protein Homology CDS 1864 2169 . + 0 ID=cds-WP_000590543.1;Parent=gene-D5F94_RS09020;Dbxref=GenBank:WP_000590543.1;Name=WP_000590543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590540.1;locus_tag=D5F94_RS09020;product=PTS sugar transporter subunit IIB;protein_id=WP_000590543.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 2209 3657 . + . ID=gene-D5F94_RS09025;Name=D5F94_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09025;old_locus_tag=D5F94_09025 NZ_QYTD01000016.1 Protein Homology CDS 2209 3657 . + 0 ID=cds-WP_124749603.1;Parent=gene-D5F94_RS09025;Dbxref=GenBank:WP_124749603.1;Name=WP_124749603.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195826.1;locus_tag=D5F94_RS09025;product=PTS transporter subunit IIC;protein_id=WP_124749603.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 3897 6347 . + . ID=gene-D5F94_RS09030;Name=D5F94_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09030;old_locus_tag=D5F94_09030 NZ_QYTD01000016.1 Protein Homology CDS 3897 6347 . + 0 ID=cds-WP_124749605.1;Parent=gene-D5F94_RS09030;Dbxref=GenBank:WP_124749605.1;Name=WP_124749605.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771303.1;locus_tag=D5F94_RS09030;product=sialidase family protein;protein_id=WP_124749605.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 6593 7018 . + . ID=gene-D5F94_RS09035;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=D5F94_RS09035;old_locus_tag=D5F94_09035 NZ_QYTD01000016.1 Protein Homology CDS 6593 7018 . + 0 ID=cds-WP_016503263.1;Parent=gene-D5F94_RS09035;Dbxref=GenBank:WP_016503263.1;Name=WP_016503263.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503263.1;locus_tag=D5F94_RS09035;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_016503263.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 7039 7554 . + . ID=gene-D5F94_RS09040;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=D5F94_RS09040;old_locus_tag=D5F94_09040 NZ_QYTD01000016.1 Protein Homology CDS 7039 7554 . + 0 ID=cds-WP_000686152.1;Parent=gene-D5F94_RS09040;Dbxref=GenBank:WP_000686152.1;Name=WP_000686152.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027025.1;locus_tag=D5F94_RS09040;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_000686152.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 7565 8497 . + . ID=gene-D5F94_RS09045;Name=D5F94_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09045;old_locus_tag=D5F94_09045 NZ_QYTD01000016.1 Protein Homology CDS 7565 8497 . + 0 ID=cds-WP_016503262.1;Parent=gene-D5F94_RS09045;Dbxref=GenBank:WP_016503262.1;Name=WP_016503262.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604238.1;locus_tag=D5F94_RS09045;product=tagatose-6-phosphate kinase;protein_id=WP_016503262.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 8499 9476 . + . ID=gene-D5F94_RS09050;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=D5F94_RS09050;old_locus_tag=D5F94_09050 NZ_QYTD01000016.1 Protein Homology CDS 8499 9476 . + 0 ID=cds-WP_000524689.1;Parent=gene-D5F94_RS09050;Dbxref=GenBank:WP_000524689.1;Name=WP_000524689.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524687.1;locus_tag=D5F94_RS09050;product=tagatose-bisphosphate aldolase;protein_id=WP_000524689.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 9530 10425 . + . ID=gene-D5F94_RS09055;Name=D5F94_RS09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09055;old_locus_tag=D5F94_09055;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 9530 10425 . + 0 ID=cds-D5F94_RS09055;Parent=gene-D5F94_RS09055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018631.1;locus_tag=D5F94_RS09055;product=aldose 1-epimerase family protein;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 10520 11371 . + . ID=gene-D5F94_RS09060;Name=D5F94_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09060;old_locus_tag=D5F94_09060 NZ_QYTD01000016.1 Protein Homology CDS 10520 11371 . + 0 ID=cds-WP_000345943.1;Parent=gene-D5F94_RS09060;Dbxref=GenBank:WP_000345943.1;Name=WP_000345943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000347002.1;locus_tag=D5F94_RS09060;product=helix-turn-helix domain-containing protein;protein_id=WP_000345943.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 11472 12605 . + . ID=gene-D5F94_RS09065;Name=D5F94_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09065;old_locus_tag=D5F94_09065 NZ_QYTD01000016.1 Protein Homology CDS 11472 12605 . + 0 ID=cds-WP_000229966.1;Parent=gene-D5F94_RS09065;Dbxref=GenBank:WP_000229966.1;Name=WP_000229966.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002988014.1;locus_tag=D5F94_RS09065;product=ABC transporter ATP-binding protein;protein_id=WP_000229966.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 12735 14342 . + . ID=gene-D5F94_RS09070;Name=D5F94_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09070;old_locus_tag=D5F94_09070 NZ_QYTD01000016.1 Protein Homology CDS 12735 14342 . + 0 ID=cds-WP_124749607.1;Parent=gene-D5F94_RS09070;Dbxref=GenBank:WP_124749607.1;Name=WP_124749607.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481260.1;locus_tag=D5F94_RS09070;product=glycoside hydrolase family 13 protein;protein_id=WP_124749607.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 14430 15425 . + . ID=gene-D5F94_RS09075;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D5F94_RS09075;old_locus_tag=D5F94_09075 NZ_QYTD01000016.1 Protein Homology CDS 14430 15425 . + 0 ID=cds-WP_000279626.1;Parent=gene-D5F94_RS09075;Dbxref=GenBank:WP_000279626.1;Name=WP_000279626.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279623.1;locus_tag=D5F94_RS09075;product=UDP-glucose 4-epimerase GalE;protein_id=WP_000279626.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 15438 16124 . - . ID=gene-D5F94_RS09080;Name=D5F94_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09080;old_locus_tag=D5F94_09080 NZ_QYTD01000016.1 Protein Homology CDS 15438 16124 . - 0 ID=cds-WP_124749609.1;Parent=gene-D5F94_RS09080;Dbxref=GenBank:WP_124749609.1;Name=WP_124749609.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771253.1;locus_tag=D5F94_RS09080;product=response regulator;protein_id=WP_124749609.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 16126 17601 . - . ID=gene-D5F94_RS09085;Name=D5F94_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09085;old_locus_tag=D5F94_09085 NZ_QYTD01000016.1 Protein Homology CDS 16126 17601 . - 0 ID=cds-WP_046052134.1;Parent=gene-D5F94_RS09085;Dbxref=GenBank:WP_046052134.1;Name=WP_046052134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728121.1;locus_tag=D5F94_RS09085;product=cache domain-containing protein;protein_id=WP_046052134.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 17805 19142 . + . ID=gene-D5F94_RS09090;Name=D5F94_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09090;old_locus_tag=D5F94_09090 NZ_QYTD01000016.1 Protein Homology CDS 17805 19142 . + 0 ID=cds-WP_016503257.1;Parent=gene-D5F94_RS09090;Dbxref=GenBank:WP_016503257.1;Name=WP_016503257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786046.1;locus_tag=D5F94_RS09090;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_016503257.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 19167 20329 . + . ID=gene-D5F94_RS09095;Name=D5F94_RS09095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09095;old_locus_tag=D5F94_09095;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 19167 20329 . + 0 ID=cds-D5F94_RS09095;Parent=gene-D5F94_RS09095;Note=frameshifted;Ontology_term=GO:0004471,GO:0004473,GO:0046872,GO:0051287;gbkey=CDS;go_function=malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,malate dehydrogenase (decarboxylating) (NADP+) activity|0004473||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649394.1;locus_tag=D5F94_RS09095;product=NAD(P)-dependent malic enzyme;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 20520 20864 . + . ID=gene-D5F94_RS09105;Name=D5F94_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09105;old_locus_tag=D5F94_09105 NZ_QYTD01000016.1 Protein Homology CDS 20520 20864 . + 0 ID=cds-WP_000286792.1;Parent=gene-D5F94_RS09105;Dbxref=GenBank:WP_000286792.1;Name=WP_000286792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286789.1;locus_tag=D5F94_RS09105;product=thioredoxin domain-containing protein;protein_id=WP_000286792.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 20941 21282 . + . ID=gene-D5F94_RS09110;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=D5F94_RS09110;old_locus_tag=D5F94_09110 NZ_QYTD01000016.1 Protein Homology CDS 20941 21282 . + 0 ID=cds-WP_000056607.1;Parent=gene-D5F94_RS09110;Dbxref=GenBank:WP_000056607.1;Name=WP_000056607.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056605.1;locus_tag=D5F94_RS09110;product=preprotein translocase subunit YajC;protein_id=WP_000056607.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 21449 22201 . + . ID=gene-D5F94_RS09115;Name=D5F94_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09115;old_locus_tag=D5F94_09115 NZ_QYTD01000016.1 Protein Homology CDS 21449 22201 . + 0 ID=cds-WP_016503256.1;Parent=gene-D5F94_RS09115;Dbxref=GenBank:WP_016503256.1;Name=WP_016503256.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469562.1;locus_tag=D5F94_RS09115;product=isoprenyl transferase;protein_id=WP_016503256.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 22216 23010 . + . ID=gene-D5F94_RS09120;Name=D5F94_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09120;old_locus_tag=D5F94_09120 NZ_QYTD01000016.1 Protein Homology CDS 22216 23010 . + 0 ID=cds-WP_016503255.1;Parent=gene-D5F94_RS09120;Dbxref=GenBank:WP_016503255.1;Name=WP_016503255.1;Ontology_term=GO:0016024,GO:0004605,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002275264.1;locus_tag=D5F94_RS09120;product=phosphatidate cytidylyltransferase;protein_id=WP_016503255.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 23041 24300 . + . ID=gene-D5F94_RS09125;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=D5F94_RS09125;old_locus_tag=D5F94_09125 NZ_QYTD01000016.1 Protein Homology CDS 23041 24300 . + 0 ID=cds-WP_000900651.1;Parent=gene-D5F94_RS09125;Dbxref=GenBank:WP_000900651.1;Name=WP_000900651.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900646.1;locus_tag=D5F94_RS09125;product=RIP metalloprotease RseP;protein_id=WP_000900651.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 24392 26245 . + . ID=gene-D5F94_RS09130;Name=D5F94_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09130;old_locus_tag=D5F94_09130 NZ_QYTD01000016.1 Protein Homology CDS 24392 26245 . + 0 ID=cds-WP_124749070.1;Parent=gene-D5F94_RS09130;Dbxref=GenBank:WP_124749070.1;Name=WP_124749070.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814045.1;locus_tag=D5F94_RS09130;product=proline--tRNA ligase;protein_id=WP_124749070.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 26370 26954 . + . ID=gene-D5F94_RS09135;Name=D5F94_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09135;old_locus_tag=D5F94_09135 NZ_QYTD01000016.1 Protein Homology CDS 26370 26954 . + 0 ID=cds-WP_124749611.1;Parent=gene-D5F94_RS09135;Dbxref=GenBank:WP_124749611.1;Name=WP_124749611.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842267.1;locus_tag=D5F94_RS09135;product=glycoside hydrolase family 73 protein;protein_id=WP_124749611.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 27077 31483 . + . ID=gene-D5F94_RS09140;Name=D5F94_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09140;old_locus_tag=D5F94_09140 NZ_QYTD01000016.1 Protein Homology CDS 27077 31483 . + 0 ID=cds-WP_001292134.1;Parent=gene-D5F94_RS09140;Dbxref=GenBank:WP_001292134.1;Name=WP_001292134.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889165.1;locus_tag=D5F94_RS09140;product=PolC-type DNA polymerase III;protein_id=WP_001292134.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 31610 32036 . + . ID=gene-D5F94_RS09145;Name=D5F94_RS09145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09145;old_locus_tag=D5F94_09145;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 31610 32036 . + 0 ID=cds-D5F94_RS09145;Parent=gene-D5F94_RS09145;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526288.1;locus_tag=D5F94_RS09145;product=MarR family winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 32169 32783 . + . ID=gene-D5F94_RS09150;Name=D5F94_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09150;old_locus_tag=D5F94_09150 NZ_QYTD01000016.1 Protein Homology CDS 32169 32783 . + 0 ID=cds-WP_000008880.1;Parent=gene-D5F94_RS09150;Dbxref=GenBank:WP_000008880.1;Name=WP_000008880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285012.1;locus_tag=D5F94_RS09150;product=nitroreductase family protein;protein_id=WP_000008880.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 32955 34826 . - . ID=gene-D5F94_RS09155;Name=D5F94_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09155;old_locus_tag=D5F94_09155 NZ_QYTD01000016.1 Protein Homology CDS 32955 34826 . - 0 ID=cds-WP_016503252.1;Parent=gene-D5F94_RS09155;Dbxref=GenBank:WP_016503252.1;Name=WP_016503252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644057.1;locus_tag=D5F94_RS09155;product=transglutaminase domain-containing protein;protein_id=WP_016503252.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 35334 35972 . - . ID=gene-D5F94_RS09165;Name=D5F94_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09165;old_locus_tag=D5F94_09165 NZ_QYTD01000016.1 Protein Homology CDS 35334 35972 . - 0 ID=cds-WP_016503250.1;Parent=gene-D5F94_RS09165;Dbxref=GenBank:WP_016503250.1;Name=WP_016503250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000597402.1;locus_tag=D5F94_RS09165;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_016503250.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 35984 36991 . - . ID=gene-D5F94_RS09170;Name=D5F94_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09170;old_locus_tag=D5F94_09170 NZ_QYTD01000016.1 Protein Homology CDS 35984 36991 . - 0 ID=cds-WP_016503249.1;Parent=gene-D5F94_RS09170;Dbxref=GenBank:WP_016503249.1;Name=WP_016503249.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503249.1;locus_tag=D5F94_RS09170;product=sugar kinase;protein_id=WP_016503249.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 37017 37655 . - . ID=gene-D5F94_RS09175;Name=dhuI;gbkey=Gene;gene=dhuI;gene_biotype=protein_coding;locus_tag=D5F94_RS09175;old_locus_tag=D5F94_09175 NZ_QYTD01000016.1 Protein Homology CDS 37017 37655 . - 0 ID=cds-WP_016481250.1;Parent=gene-D5F94_RS09175;Dbxref=GenBank:WP_016481250.1;Name=WP_016481250.1;gbkey=CDS;gene=dhuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684791.1;locus_tag=D5F94_RS09175;product=5-dehydro-4-deoxy-D-glucuronate isomerase DhuI;protein_id=WP_016481250.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 37672 38484 . - . ID=gene-D5F94_RS09180;Name=dhuD;gbkey=Gene;gene=dhuD;gene_biotype=protein_coding;locus_tag=D5F94_RS09180;old_locus_tag=D5F94_09180 NZ_QYTD01000016.1 Protein Homology CDS 37672 38484 . - 0 ID=cds-WP_124749613.1;Parent=gene-D5F94_RS09180;Dbxref=GenBank:WP_124749613.1;Name=WP_124749613.1;gbkey=CDS;gene=dhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139169.1;locus_tag=D5F94_RS09180;product=monomeric 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DhuD;protein_id=WP_124749613.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 38761 39195 . + . ID=gene-D5F94_RS09190;Name=D5F94_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09190;old_locus_tag=D5F94_09190 NZ_QYTD01000016.1 Protein Homology CDS 38761 39195 . + 0 ID=cds-WP_016503248.1;Parent=gene-D5F94_RS09190;Dbxref=GenBank:WP_016503248.1;Name=WP_016503248.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590444.1;locus_tag=D5F94_RS09190;product=PTS sugar transporter subunit IIA;protein_id=WP_016503248.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 39198 40394 . + . ID=gene-D5F94_RS09195;Name=D5F94_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09195;old_locus_tag=D5F94_09195 NZ_QYTD01000016.1 Protein Homology CDS 39198 40394 . + 0 ID=cds-WP_016503247.1;Parent=gene-D5F94_RS09195;Dbxref=GenBank:WP_016503247.1;Name=WP_016503247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975712.1;locus_tag=D5F94_RS09195;product=glycoside hydrolase family 88 protein;protein_id=WP_016503247.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 40449 40943 . + . ID=gene-D5F94_RS09200;Name=D5F94_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09200;old_locus_tag=D5F94_09200 NZ_QYTD01000016.1 Protein Homology CDS 40449 40943 . + 0 ID=cds-WP_000718802.1;Parent=gene-D5F94_RS09200;Dbxref=GenBank:WP_000718802.1;Name=WP_000718802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718799.1;locus_tag=D5F94_RS09200;product=PTS sugar transporter subunit IIB;protein_id=WP_000718802.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 40979 41845 . + . ID=gene-D5F94_RS09205;Name=D5F94_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09205;old_locus_tag=D5F94_09205 NZ_QYTD01000016.1 Protein Homology CDS 40979 41845 . + 0 ID=cds-WP_000355267.1;Parent=gene-D5F94_RS09205;Dbxref=GenBank:WP_000355267.1;Name=WP_000355267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058783.1;locus_tag=D5F94_RS09205;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000355267.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 41832 42647 . + . ID=gene-D5F94_RS09210;Name=D5F94_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09210;old_locus_tag=D5F94_09210 NZ_QYTD01000016.1 Protein Homology CDS 41832 42647 . + 0 ID=cds-WP_000147945.1;Parent=gene-D5F94_RS09210;Dbxref=GenBank:WP_000147945.1;Name=WP_000147945.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147944.1;locus_tag=D5F94_RS09210;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000147945.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 42727 44632 . + . ID=gene-D5F94_RS09220;Name=D5F94_RS09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09220;old_locus_tag=D5F94_09220;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 42727 44632 . + 0 ID=cds-D5F94_RS09220;Parent=gene-D5F94_RS09220;Note=frameshifted;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654956.1;locus_tag=D5F94_RS09220;product=heparinase II/III domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 44712 45713 . + . ID=gene-D5F94_RS09225;Name=D5F94_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09225;old_locus_tag=D5F94_09225 NZ_QYTD01000016.1 Protein Homology CDS 44712 45713 . + 0 ID=cds-WP_000038817.1;Parent=gene-D5F94_RS09225;Dbxref=GenBank:WP_000038817.1;Name=WP_000038817.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038815.1;locus_tag=D5F94_RS09225;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000038817.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 45784 46398 . - . ID=gene-D5F94_RS09230;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=D5F94_RS09230;old_locus_tag=D5F94_09230 NZ_QYTD01000016.1 Protein Homology CDS 45784 46398 . - 0 ID=cds-WP_001272875.1;Parent=gene-D5F94_RS09230;Dbxref=GenBank:WP_001272875.1;Name=WP_001272875.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058782.1;locus_tag=D5F94_RS09230;product=peptide deformylase;protein_id=WP_001272875.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 46464 47108 . - . ID=gene-D5F94_RS09235;Name=D5F94_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09235;old_locus_tag=D5F94_09235 NZ_QYTD01000016.1 Protein Homology CDS 46464 47108 . - 0 ID=cds-WP_000350701.1;Parent=gene-D5F94_RS09235;Dbxref=GenBank:WP_000350701.1;Name=WP_000350701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350701.1;locus_tag=D5F94_RS09235;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_000350701.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 47220 48383 . + . ID=gene-D5F94_RS09245;Name=D5F94_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09245;old_locus_tag=D5F94_09245 NZ_QYTD01000016.1 Protein Homology CDS 47220 48383 . + 0 ID=cds-WP_016503245.1;Parent=gene-D5F94_RS09245;Dbxref=GenBank:WP_016503245.1;Name=WP_016503245.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689132.1;locus_tag=D5F94_RS09245;product=MFS transporter;protein_id=WP_016503245.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 48429 49412 . - . ID=gene-D5F94_RS09250;Name=D5F94_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09250;old_locus_tag=D5F94_09250 NZ_QYTD01000016.1 Protein Homology CDS 48429 49412 . - 0 ID=cds-WP_000566092.1;Parent=gene-D5F94_RS09250;Dbxref=GenBank:WP_000566092.1;Name=WP_000566092.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566098.1;locus_tag=D5F94_RS09250;product=Gfo/Idh/MocA family protein;protein_id=WP_000566092.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 49560 51455 . + . ID=gene-D5F94_RS09255;Name=D5F94_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09255;old_locus_tag=D5F94_09255 NZ_QYTD01000016.1 Protein Homology CDS 49560 51455 . + 0 ID=cds-WP_000599041.1;Parent=gene-D5F94_RS09255;Dbxref=GenBank:WP_000599041.1;Name=WP_000599041.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599042.1;locus_tag=D5F94_RS09255;product=M13 family metallopeptidase;protein_id=WP_000599041.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 51505 52458 . - . ID=gene-D5F94_RS09260;Name=D5F94_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09260;old_locus_tag=D5F94_09260 NZ_QYTD01000016.1 Protein Homology CDS 51505 52458 . - 0 ID=cds-WP_000737083.1;Parent=gene-D5F94_RS09260;Dbxref=GenBank:WP_000737083.1;Name=WP_000737083.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737092.1;locus_tag=D5F94_RS09260;product=S66 family peptidase;protein_id=WP_000737083.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 52625 52861 . + . ID=gene-D5F94_RS09265;Name=D5F94_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09265;old_locus_tag=D5F94_09265 NZ_QYTD01000016.1 Protein Homology CDS 52625 52861 . + 0 ID=cds-WP_000080855.1;Parent=gene-D5F94_RS09265;Dbxref=GenBank:WP_000080855.1;Name=WP_000080855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080857.1;locus_tag=D5F94_RS09265;product=hypothetical protein;protein_id=WP_000080855.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 52863 54932 . + . ID=gene-D5F94_RS09270;Name=D5F94_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09270;old_locus_tag=D5F94_09270 NZ_QYTD01000016.1 Protein Homology CDS 52863 54932 . + 0 ID=cds-WP_000393092.1;Parent=gene-D5F94_RS09270;Dbxref=GenBank:WP_000393092.1;Name=WP_000393092.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771255.1;locus_tag=D5F94_RS09270;product=cation:proton antiporter;protein_id=WP_000393092.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 55004 55074 . - . ID=gene-D5F94_RS09275;Name=D5F94_RS09275;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS09275;old_locus_tag=D5F94_09275 NZ_QYTD01000016.1 tRNAscan-SE tRNA 55004 55074 . - . ID=rna-D5F94_RS09275;Parent=gene-D5F94_RS09275;anticodon=(pos:complement(55040..55042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS09275;product=tRNA-Cys NZ_QYTD01000016.1 tRNAscan-SE exon 55004 55074 . - . ID=exon-D5F94_RS09275-1;Parent=rna-D5F94_RS09275;anticodon=(pos:complement(55040..55042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS09275;product=tRNA-Cys NZ_QYTD01000016.1 RefSeq gene 55209 56741 . - . ID=gene-D5F94_RS09280;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=D5F94_RS09280;old_locus_tag=D5F94_09280 NZ_QYTD01000016.1 Protein Homology CDS 55209 56741 . - 0 ID=cds-WP_000242127.1;Parent=gene-D5F94_RS09280;Dbxref=GenBank:WP_000242127.1;Name=WP_000242127.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242134.1;locus_tag=D5F94_RS09280;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000242127.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 56759 57319 . - . ID=gene-D5F94_RS09285;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=D5F94_RS09285;old_locus_tag=D5F94_09285 NZ_QYTD01000016.1 Protein Homology CDS 56759 57319 . - 0 ID=cds-WP_016503239.1;Parent=gene-D5F94_RS09285;Dbxref=GenBank:WP_016503239.1;Name=WP_016503239.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002273221.1;locus_tag=D5F94_RS09285;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_016503239.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 57596 58366 . + . ID=gene-D5F94_RS09290;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=D5F94_RS09290;old_locus_tag=D5F94_09290 NZ_QYTD01000016.1 Protein Homology CDS 57596 58366 . + 0 ID=cds-WP_000268454.1;Parent=gene-D5F94_RS09290;Dbxref=GenBank:WP_000268454.1;Name=WP_000268454.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268454.1;locus_tag=D5F94_RS09290;product=30S ribosomal protein S2;protein_id=WP_000268454.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 58460 59500 . + . ID=gene-D5F94_RS09295;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=D5F94_RS09295;old_locus_tag=D5F94_09295 NZ_QYTD01000016.1 Protein Homology CDS 58460 59500 . + 0 ID=cds-WP_000808080.1;Parent=gene-D5F94_RS09295;Dbxref=GenBank:WP_000808080.1;Name=WP_000808080.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808079.1;locus_tag=D5F94_RS09295;product=translation elongation factor Ts;protein_id=WP_000808080.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 59660 60121 . - . ID=gene-D5F94_RS09300;Name=D5F94_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09300;old_locus_tag=D5F94_09300 NZ_QYTD01000016.1 Protein Homology CDS 59660 60121 . - 0 ID=cds-WP_001106578.1;Parent=gene-D5F94_RS09300;Dbxref=GenBank:WP_001106578.1;Name=WP_001106578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650709.1;locus_tag=D5F94_RS09300;product=COG2426 family protein;protein_id=WP_001106578.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 60294 60758 . + . ID=gene-D5F94_RS09305;Name=D5F94_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09305;old_locus_tag=D5F94_09305 NZ_QYTD01000016.1 Protein Homology CDS 60294 60758 . + 0 ID=cds-WP_000985641.1;Parent=gene-D5F94_RS09305;Dbxref=GenBank:WP_000985641.1;Name=WP_000985641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985642.1;locus_tag=D5F94_RS09305;product=CtsR family transcriptional regulator;protein_id=WP_000985641.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 60755 63202 . + . ID=gene-D5F94_RS09310;Name=D5F94_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09310;old_locus_tag=D5F94_09310 NZ_QYTD01000016.1 Protein Homology CDS 60755 63202 . + 0 ID=cds-WP_124749065.1;Parent=gene-D5F94_RS09310;Dbxref=GenBank:WP_124749065.1;Name=WP_124749065.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768440.1;locus_tag=D5F94_RS09310;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_124749065.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 63422 63913 . - . ID=gene-D5F94_RS09315;Name=D5F94_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09315;old_locus_tag=D5F94_09315 NZ_QYTD01000016.1 Protein Homology CDS 63422 63913 . - 0 ID=cds-WP_000586899.1;Parent=gene-D5F94_RS09315;Dbxref=GenBank:WP_000586899.1;Name=WP_000586899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771630.1;locus_tag=D5F94_RS09315;product=GNAT family N-acetyltransferase;protein_id=WP_000586899.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 63927 64568 . - . ID=gene-D5F94_RS09320;Name=D5F94_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09320;old_locus_tag=D5F94_09320 NZ_QYTD01000016.1 Protein Homology CDS 63927 64568 . - 0 ID=cds-WP_000909522.1;Parent=gene-D5F94_RS09320;Dbxref=GenBank:WP_000909522.1;Name=WP_000909522.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775268.1;locus_tag=D5F94_RS09320;product=deoxynucleoside kinase;protein_id=WP_000909522.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 64689 65666 . - . ID=gene-D5F94_RS09325;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=D5F94_RS09325;old_locus_tag=D5F94_09325 NZ_QYTD01000016.1 Protein Homology CDS 64689 65666 . - 0 ID=cds-WP_000192732.1;Parent=gene-D5F94_RS09325;Dbxref=GenBank:WP_000192732.1;Name=WP_000192732.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632282.1;locus_tag=D5F94_RS09325;product=tRNA dihydrouridine synthase DusB;protein_id=WP_000192732.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 65650 66525 . - . ID=gene-D5F94_RS09330;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=D5F94_RS09330;old_locus_tag=D5F94_09330 NZ_QYTD01000016.1 Protein Homology CDS 65650 66525 . - 0 ID=cds-WP_016503236.1;Parent=gene-D5F94_RS09330;Dbxref=GenBank:WP_016503236.1;Name=WP_016503236.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645314.1;locus_tag=D5F94_RS09330;product=Hsp33 family molecular chaperone HslO;protein_id=WP_016503236.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 66665 67921 . - . ID=gene-D5F94_RS09335;Name=D5F94_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09335;old_locus_tag=D5F94_09335 NZ_QYTD01000016.1 Protein Homology CDS 66665 67921 . - 0 ID=cds-WP_016481235.1;Parent=gene-D5F94_RS09335;Dbxref=GenBank:WP_016481235.1;Name=WP_016481235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285398.1;locus_tag=D5F94_RS09335;product=toxic anion resistance protein;protein_id=WP_016481235.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 67918 68736 . - . ID=gene-D5F94_RS09340;Name=D5F94_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09340;old_locus_tag=D5F94_09340 NZ_QYTD01000016.1 Protein Homology CDS 67918 68736 . - 0 ID=cds-WP_016503235.1;Parent=gene-D5F94_RS09340;Dbxref=GenBank:WP_016503235.1;Name=WP_016503235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239574.1;locus_tag=D5F94_RS09340;product=hypothetical protein;protein_id=WP_016503235.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 68860 71112 . - . ID=gene-D5F94_RS09345;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=D5F94_RS09345;old_locus_tag=D5F94_09345 NZ_QYTD01000016.1 Protein Homology CDS 68860 71112 . - 0 ID=cds-WP_016481233.1;Parent=gene-D5F94_RS09345;Dbxref=GenBank:WP_016481233.1;Name=WP_016481233.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646239.1;locus_tag=D5F94_RS09345;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=WP_016481233.1;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 71282 71956 . - . ID=gene-D5F94_RS09350;Name=D5F94_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09350;old_locus_tag=D5F94_09350 NZ_QYTD01000016.1 Protein Homology CDS 71282 71956 . - 0 ID=cds-WP_000356661.1;Parent=gene-D5F94_RS09350;Dbxref=GenBank:WP_000356661.1;Name=WP_000356661.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356657.1;locus_tag=D5F94_RS09350;product=helix-turn-helix transcriptional regulator;protein_id=WP_000356661.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 72319 73337 . + . ID=gene-D5F94_RS09355;Name=D5F94_RS09355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09355;old_locus_tag=D5F94_09355;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 72319 73337 . + 0 ID=cds-D5F94_RS09355;Parent=gene-D5F94_RS09355;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021299.1;locus_tag=D5F94_RS09355;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 73708 75000 . + . ID=gene-D5F94_RS09360;Name=D5F94_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09360;old_locus_tag=D5F94_09360 NZ_QYTD01000016.1 Protein Homology CDS 73708 75000 . + 0 ID=cds-WP_016503232.1;Parent=gene-D5F94_RS09360;Dbxref=GenBank:WP_016503232.1;Name=WP_016503232.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205037.1;locus_tag=D5F94_RS09360;product=adenylosuccinate synthase;protein_id=WP_016503232.1;transl_table=11 NZ_QYTD01000016.1 RefSeq pseudogene 75023 75317 . - . ID=gene-D5F94_RS09365;Name=D5F94_RS09365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09365;old_locus_tag=D5F94_09365;pseudo=true NZ_QYTD01000016.1 Protein Homology CDS 75023 75317 . - 0 ID=cds-D5F94_RS09365;Parent=gene-D5F94_RS09365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000600818.1;locus_tag=D5F94_RS09365;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000016.1 RefSeq gene 75476 75755 . - . ID=gene-D5F94_RS09370;Name=D5F94_RS09370;end_range=75755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09370;old_locus_tag=D5F94_09370;partial=true NZ_QYTD01000016.1 Protein Homology CDS 75476 75755 . - 1 ID=cds-WP_142997330.1;Parent=gene-D5F94_RS09370;Dbxref=GenBank:WP_142997330.1;Name=WP_142997330.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=75755,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F94_RS09370;partial=true;product=transposase;protein_id=WP_142997330.1;transl_table=11 ##sequence-region NZ_QYTD01000017.1 1 48613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000017.1 RefSeq region 1 48613 . + . ID=NZ_QYTD01000017.1:1..48613;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000017.1 RefSeq gene 1 1258 . + . ID=gene-D5F94_RS09375;Name=D5F94_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09375;old_locus_tag=D5F94_09380;partial=true;start_range=.,1 NZ_QYTD01000017.1 Protein Homology CDS 1 1258 . + 1 ID=cds-WP_185690686.1;Parent=gene-D5F94_RS09375;Dbxref=GenBank:WP_185690686.1;Name=WP_185690686.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503051.1;locus_tag=D5F94_RS09375;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_185690686.1;start_range=.,1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 1589 2596 . + . ID=gene-D5F94_RS09380;Name=D5F94_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09380;old_locus_tag=D5F94_09385 NZ_QYTD01000017.1 Protein Homology CDS 1589 2596 . + 0 ID=cds-WP_016481031.1;Parent=gene-D5F94_RS09380;Dbxref=GenBank:WP_016481031.1;Name=WP_016481031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263779.1;locus_tag=D5F94_RS09380;product=sugar transferase;protein_id=WP_016481031.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 2605 3810 . + . ID=gene-D5F94_RS09385;Name=D5F94_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09385;old_locus_tag=D5F94_09390 NZ_QYTD01000017.1 Protein Homology CDS 2605 3810 . + 0 ID=cds-WP_016481030.1;Parent=gene-D5F94_RS09385;Dbxref=GenBank:WP_016481030.1;Name=WP_016481030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751410.1;locus_tag=D5F94_RS09385;product=CDP-glycerol--glycerophosphate glycerophosphotransferase;protein_id=WP_016481030.1;transl_table=11 NZ_QYTD01000017.1 RefSeq pseudogene 3807 5048 . + . ID=gene-D5F94_RS09390;Name=D5F94_RS09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09390;old_locus_tag=D5F94_09395;pseudo=true NZ_QYTD01000017.1 Protein Homology CDS 3807 5048 . + 0 ID=cds-D5F94_RS09390;Parent=gene-D5F94_RS09390;Note=internal stop;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649797.1;locus_tag=D5F94_RS09390;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 5038 6222 . + . ID=gene-D5F94_RS09395;Name=D5F94_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09395;old_locus_tag=D5F94_09400 NZ_QYTD01000017.1 Protein Homology CDS 5038 6222 . + 0 ID=cds-WP_000795052.1;Parent=gene-D5F94_RS09395;Dbxref=GenBank:WP_000795052.1;Name=WP_000795052.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647328.1;locus_tag=D5F94_RS09395;product=glycosyltransferase;protein_id=WP_000795052.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 6215 7090 . + . ID=gene-D5F94_RS09400;Name=D5F94_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09400;old_locus_tag=D5F94_09405 NZ_QYTD01000017.1 Protein Homology CDS 6215 7090 . + 0 ID=cds-WP_016481027.1;Parent=gene-D5F94_RS09400;Dbxref=GenBank:WP_016481027.1;Name=WP_016481027.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130208.1;locus_tag=D5F94_RS09400;product=glycosyltransferase family 2 protein;protein_id=WP_016481027.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 7151 8347 . + . ID=gene-D5F94_RS09405;Name=D5F94_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09405;old_locus_tag=D5F94_09410 NZ_QYTD01000017.1 Protein Homology CDS 7151 8347 . + 0 ID=cds-WP_124749619.1;Parent=gene-D5F94_RS09405;Dbxref=GenBank:WP_124749619.1;Name=WP_124749619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503048.1;locus_tag=D5F94_RS09405;product=SP_1767 family glycosyltransferase;protein_id=WP_124749619.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 8471 9700 . + . ID=gene-D5F94_RS09410;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=D5F94_RS09410;old_locus_tag=D5F94_09415 NZ_QYTD01000017.1 Protein Homology CDS 8471 9700 . + 0 ID=cds-WP_000772256.1;Parent=gene-D5F94_RS09410;Dbxref=GenBank:WP_000772256.1;Name=WP_000772256.1;Ontology_term=GO:0006886;gbkey=CDS;gene=secY2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772256.1;locus_tag=D5F94_RS09410;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_000772256.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 9700 11244 . + . ID=gene-D5F94_RS09415;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=D5F94_RS09415;old_locus_tag=D5F94_09420 NZ_QYTD01000017.1 Protein Homology CDS 9700 11244 . + 0 ID=cds-WP_016503046.1;Parent=gene-D5F94_RS09415;Dbxref=GenBank:WP_016503046.1;Name=WP_016503046.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481024.1;locus_tag=D5F94_RS09415;product=accessory Sec system protein Asp1;protein_id=WP_016503046.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 11251 12810 . + . ID=gene-D5F94_RS09420;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=D5F94_RS09420;old_locus_tag=D5F94_09425 NZ_QYTD01000017.1 Protein Homology CDS 11251 12810 . + 0 ID=cds-WP_000034857.1;Parent=gene-D5F94_RS09420;Dbxref=GenBank:WP_000034857.1;Name=WP_000034857.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058668.1;locus_tag=D5F94_RS09420;product=accessory Sec system protein Asp2;protein_id=WP_000034857.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 12807 13799 . + . ID=gene-D5F94_RS09425;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=D5F94_RS09425;old_locus_tag=D5F94_09430 NZ_QYTD01000017.1 Protein Homology CDS 12807 13799 . + 0 ID=cds-WP_124749183.1;Parent=gene-D5F94_RS09425;Dbxref=GenBank:WP_124749183.1;Name=WP_124749183.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647904.1;locus_tag=D5F94_RS09425;product=accessory Sec system protein Asp3;protein_id=WP_124749183.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 13786 16173 . + . ID=gene-D5F94_RS09430;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=D5F94_RS09430;old_locus_tag=D5F94_09435 NZ_QYTD01000017.1 Protein Homology CDS 13786 16173 . + 0 ID=cds-WP_016503044.1;Parent=gene-D5F94_RS09430;Dbxref=GenBank:WP_016503044.1;Name=WP_016503044.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650350.1;locus_tag=D5F94_RS09430;product=accessory Sec system translocase SecA2;protein_id=WP_016503044.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 16187 17695 . + . ID=gene-D5F94_RS09435;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=D5F94_RS09435;old_locus_tag=D5F94_09440 NZ_QYTD01000017.1 Protein Homology CDS 16187 17695 . + 0 ID=cds-WP_016481022.1;Parent=gene-D5F94_RS09435;Dbxref=GenBank:WP_016481022.1;Name=WP_016481022.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771536.1;locus_tag=D5F94_RS09435;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_016481022.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 17688 19013 . + . ID=gene-D5F94_RS09440;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=D5F94_RS09440;old_locus_tag=D5F94_09445 NZ_QYTD01000017.1 Protein Homology CDS 17688 19013 . + 0 ID=cds-WP_124749621.1;Parent=gene-D5F94_RS09440;Dbxref=GenBank:WP_124749621.1;Name=WP_124749621.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646253.1;locus_tag=D5F94_RS09440;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_124749621.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 19024 19212 . + . ID=gene-D5F94_RS09445;Name=D5F94_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09445;old_locus_tag=D5F94_09450 NZ_QYTD01000017.1 Protein Homology CDS 19024 19212 . + 0 ID=cds-WP_000728848.1;Parent=gene-D5F94_RS09445;Dbxref=GenBank:WP_000728848.1;Name=WP_000728848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728848.1;locus_tag=D5F94_RS09445;product=hypothetical protein;protein_id=WP_000728848.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 19296 19760 . + . ID=gene-D5F94_RS09450;Name=D5F94_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09450;old_locus_tag=D5F94_09455 NZ_QYTD01000017.1 Protein Homology CDS 19296 19760 . + 0 ID=cds-WP_016481020.1;Parent=gene-D5F94_RS09450;Dbxref=GenBank:WP_016481020.1;Name=WP_016481020.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649420.1;locus_tag=D5F94_RS09450;product=8-oxo-dGTP diphosphatase;protein_id=WP_016481020.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 19803 21275 . - . ID=gene-D5F94_RS09455;Name=D5F94_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09455;old_locus_tag=D5F94_09460 NZ_QYTD01000017.1 Protein Homology CDS 19803 21275 . - 0 ID=cds-WP_000416073.1;Parent=gene-D5F94_RS09455;Dbxref=GenBank:WP_000416073.1;Name=WP_000416073.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771948.1;locus_tag=D5F94_RS09455;product=peptide MFS transporter;protein_id=WP_000416073.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 21506 22342 . - . ID=gene-D5F94_RS09460;Name=D5F94_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09460;old_locus_tag=D5F94_09465 NZ_QYTD01000017.1 Protein Homology CDS 21506 22342 . - 0 ID=cds-WP_001035401.1;Parent=gene-D5F94_RS09460;Dbxref=GenBank:WP_001035401.1;Name=WP_001035401.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035402.1;locus_tag=D5F94_RS09460;product=sugar ABC transporter permease;protein_id=WP_001035401.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 22342 23712 . - . ID=gene-D5F94_RS09465;Name=D5F94_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09465;old_locus_tag=D5F94_09470 NZ_QYTD01000017.1 Protein Homology CDS 22342 23712 . - 0 ID=cds-WP_001035541.1;Parent=gene-D5F94_RS09465;Dbxref=GenBank:WP_001035541.1;Name=WP_001035541.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035543.1;locus_tag=D5F94_RS09465;product=carbohydrate ABC transporter permease;protein_id=WP_001035541.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 23810 25057 . - . ID=gene-D5F94_RS09470;Name=D5F94_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09470;old_locus_tag=D5F94_09475 NZ_QYTD01000017.1 Protein Homology CDS 23810 25057 . - 0 ID=cds-WP_000414616.1;Parent=gene-D5F94_RS09470;Dbxref=GenBank:WP_000414616.1;Name=WP_000414616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768369.1;locus_tag=D5F94_RS09470;product=extracellular solute-binding protein;protein_id=WP_000414616.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 25314 26336 . + . ID=gene-D5F94_RS09475;Name=D5F94_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09475;old_locus_tag=D5F94_09480 NZ_QYTD01000017.1 Protein Homology CDS 25314 26336 . + 0 ID=cds-WP_016481019.1;Parent=gene-D5F94_RS09475;Dbxref=GenBank:WP_016481019.1;Name=WP_016481019.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767614.1;locus_tag=D5F94_RS09475;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_016481019.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 26464 27960 . + . ID=gene-D5F94_RS09480;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=D5F94_RS09480;old_locus_tag=D5F94_09485 NZ_QYTD01000017.1 Protein Homology CDS 26464 27960 . + 0 ID=cds-WP_000745458.1;Parent=gene-D5F94_RS09480;Dbxref=GenBank:WP_000745458.1;Name=WP_000745458.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650672.1;locus_tag=D5F94_RS09480;product=4-alpha-glucanotransferase;protein_id=WP_000745458.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 27972 30236 . + . ID=gene-D5F94_RS09485;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=D5F94_RS09485;old_locus_tag=D5F94_09490 NZ_QYTD01000017.1 Protein Homology CDS 27972 30236 . + 0 ID=cds-WP_000197731.1;Parent=gene-D5F94_RS09485;Dbxref=GenBank:WP_000197731.1;Name=WP_000197731.1;Ontology_term=GO:0005975,GO:0004645,GO:0030170;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197732.1;locus_tag=D5F94_RS09485;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_000197731.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 30650 32023 . + . ID=gene-D5F94_RS09495;Name=D5F94_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09495;old_locus_tag=D5F94_09500 NZ_QYTD01000017.1 Protein Homology CDS 30650 32023 . + 0 ID=cds-WP_000914221.1;Parent=gene-D5F94_RS09495;Dbxref=GenBank:WP_000914221.1;Name=WP_000914221.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000914222.1;locus_tag=D5F94_RS09495;product=MFS transporter;protein_id=WP_000914221.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 32179 32484 . - . ID=gene-D5F94_RS09500;Name=D5F94_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09500;old_locus_tag=D5F94_09505 NZ_QYTD01000017.1 Protein Homology CDS 32179 32484 . - 0 ID=cds-WP_000220571.1;Parent=gene-D5F94_RS09500;Dbxref=GenBank:WP_000220571.1;Name=WP_000220571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220570.1;locus_tag=D5F94_RS09500;product=hypothetical protein;protein_id=WP_000220571.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 32647 33633 . + . ID=gene-D5F94_RS09505;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=D5F94_RS09505;old_locus_tag=D5F94_09510 NZ_QYTD01000017.1 Protein Homology CDS 32647 33633 . + 0 ID=cds-WP_001290916.1;Parent=gene-D5F94_RS09505;Dbxref=GenBank:WP_001290916.1;Name=WP_001290916.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290916.1;locus_tag=D5F94_RS09505;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001290916.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 33670 34797 . - . ID=gene-D5F94_RS09510;Name=D5F94_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09510;old_locus_tag=D5F94_09515 NZ_QYTD01000017.1 Protein Homology CDS 33670 34797 . - 0 ID=cds-WP_016503038.1;Parent=gene-D5F94_RS09510;Dbxref=GenBank:WP_016503038.1;Name=WP_016503038.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683737.1;locus_tag=D5F94_RS09510;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016503038.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 34901 35920 . + . ID=gene-D5F94_RS09515;Name=D5F94_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09515;old_locus_tag=D5F94_09520 NZ_QYTD01000017.1 Protein Homology CDS 34901 35920 . + 0 ID=cds-WP_162138208.1;Parent=gene-D5F94_RS09515;Dbxref=GenBank:WP_162138208.1;Name=WP_162138208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932930.1;locus_tag=D5F94_RS09515;product=ammonium transporter;protein_id=WP_162138208.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 36245 37051 . + . ID=gene-D5F94_RS09520;Name=D5F94_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09520;old_locus_tag=D5F94_09525 NZ_QYTD01000017.1 Protein Homology CDS 36245 37051 . + 0 ID=cds-WP_000037656.1;Parent=gene-D5F94_RS09520;Dbxref=GenBank:WP_000037656.1;Name=WP_000037656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037660.1;locus_tag=D5F94_RS09520;product=transporter substrate-binding domain-containing protein;protein_id=WP_000037656.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 37134 37637 . + . ID=gene-D5F94_RS09525;Name=D5F94_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09525;old_locus_tag=D5F94_09530 NZ_QYTD01000017.1 Protein Homology CDS 37134 37637 . + 0 ID=cds-WP_000249813.1;Parent=gene-D5F94_RS09525;Dbxref=GenBank:WP_000249813.1;Name=WP_000249813.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480102.1;locus_tag=D5F94_RS09525;product=YkgJ family cysteine cluster protein;protein_id=WP_000249813.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 37741 37917 . + . ID=gene-D5F94_RS09530;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=D5F94_RS09530;old_locus_tag=D5F94_09535 NZ_QYTD01000017.1 Protein Homology CDS 37741 37917 . + 0 ID=cds-WP_000048058.1;Parent=gene-D5F94_RS09530;Dbxref=GenBank:WP_000048058.1;Name=WP_000048058.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884573.1;locus_tag=D5F94_RS09530;product=30S ribosomal protein S21;protein_id=WP_000048058.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 38015 38392 . - . ID=gene-D5F94_RS09535;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=D5F94_RS09535;old_locus_tag=D5F94_09540 NZ_QYTD01000017.1 Protein Homology CDS 38015 38392 . - 0 ID=cds-WP_000588846.1;Parent=gene-D5F94_RS09535;Dbxref=GenBank:WP_000588846.1;Name=WP_000588846.1;Ontology_term=GO:0006810,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588846.1;locus_tag=D5F94_RS09535;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_000588846.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 38582 40390 . + . ID=gene-D5F94_RS09540;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=D5F94_RS09540;old_locus_tag=D5F94_09545 NZ_QYTD01000017.1 Protein Homology CDS 38582 40390 . + 0 ID=cds-WP_086163433.1;Parent=gene-D5F94_RS09540;Dbxref=GenBank:WP_086163433.1;Name=WP_086163433.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560591.1;locus_tag=D5F94_RS09540;product=DNA primase;protein_id=WP_086163433.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 40398 41507 . + . ID=gene-D5F94_RS09545;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=D5F94_RS09545;old_locus_tag=D5F94_09550 NZ_QYTD01000017.1 Protein Homology CDS 40398 41507 . + 0 ID=cds-WP_000818341.1;Parent=gene-D5F94_RS09545;Dbxref=GenBank:WP_000818341.1;Name=WP_000818341.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019787874.1;locus_tag=D5F94_RS09545;product=RNA polymerase sigma factor RpoD;protein_id=WP_000818341.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 41615 41956 . + . ID=gene-D5F94_RS09550;Name=D5F94_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09550;old_locus_tag=D5F94_09555 NZ_QYTD01000017.1 Protein Homology CDS 41615 41956 . + 0 ID=cds-WP_000005643.1;Parent=gene-D5F94_RS09550;Dbxref=GenBank:WP_000005643.1;Name=WP_000005643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766829.1;locus_tag=D5F94_RS09550;product=metal-sulfur cluster assembly factor;protein_id=WP_000005643.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 42046 42900 . + . ID=gene-D5F94_RS09555;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=D5F94_RS09555;old_locus_tag=D5F94_09560 NZ_QYTD01000017.1 Protein Homology CDS 42046 42900 . + 0 ID=cds-WP_000600896.1;Parent=gene-D5F94_RS09555;Dbxref=GenBank:WP_000600896.1;Name=WP_000600896.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647909.1;locus_tag=D5F94_RS09555;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_000600896.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 43017 44171 . + . ID=gene-D5F94_RS09560;Name=cps2T;gbkey=Gene;gene=cps2T;gene_biotype=protein_coding;gene_synonym=wchF;locus_tag=D5F94_RS09560;old_locus_tag=D5F94_09565 NZ_QYTD01000017.1 Protein Homology CDS 43017 44171 . + 0 ID=cds-WP_001154392.1;Parent=gene-D5F94_RS09560;Dbxref=GenBank:WP_001154392.1;Name=WP_001154392.1;Ontology_term=GO:0016757;gbkey=CDS;gene=cps2T;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154391.1;locus_tag=D5F94_RS09560;product=beta 1-4 rhamnosyltransferase Cps2T;protein_id=WP_001154392.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 44161 45102 . + . ID=gene-D5F94_RS09565;Name=D5F94_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09565;old_locus_tag=D5F94_09570 NZ_QYTD01000017.1 Protein Homology CDS 44161 45102 . + 0 ID=cds-WP_016503035.1;Parent=gene-D5F94_RS09565;Dbxref=GenBank:WP_016503035.1;Name=WP_016503035.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503035.1;locus_tag=D5F94_RS09565;product=glycosyltransferase family 2 protein;protein_id=WP_016503035.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 45104 45835 . + . ID=gene-D5F94_RS09570;Name=D5F94_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09570;old_locus_tag=D5F94_09575 NZ_QYTD01000017.1 Protein Homology CDS 45104 45835 . + 0 ID=cds-WP_000976127.1;Parent=gene-D5F94_RS09570;Dbxref=GenBank:WP_000976127.1;Name=WP_000976127.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976126.1;locus_tag=D5F94_RS09570;product=glycosyltransferase family 2 protein;protein_id=WP_000976127.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 45832 46185 . + . ID=gene-D5F94_RS09575;Name=D5F94_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09575;old_locus_tag=D5F94_09580 NZ_QYTD01000017.1 Protein Homology CDS 45832 46185 . + 0 ID=cds-WP_000050394.1;Parent=gene-D5F94_RS09575;Dbxref=GenBank:WP_000050394.1;Name=WP_000050394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050393.1;locus_tag=D5F94_RS09575;product=DUF2304 domain-containing protein;protein_id=WP_000050394.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 46178 47911 . + . ID=gene-D5F94_RS09580;Name=D5F94_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09580;old_locus_tag=D5F94_09585 NZ_QYTD01000017.1 Protein Homology CDS 46178 47911 . + 0 ID=cds-WP_086163414.1;Parent=gene-D5F94_RS09580;Dbxref=GenBank:WP_086163414.1;Name=WP_086163414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037459.1;locus_tag=D5F94_RS09580;product=SpaA isopeptide-forming pilin-related protein;protein_id=WP_086163414.1;transl_table=11 NZ_QYTD01000017.1 RefSeq gene 47936 48613 . + . ID=gene-D5F94_RS09585;Name=D5F94_RS09585;end_range=48613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09585;old_locus_tag=D5F94_09590;partial=true NZ_QYTD01000017.1 Protein Homology CDS 47936 48613 . + 0 ID=cds-WP_142997331.1;Parent=gene-D5F94_RS09585;Dbxref=GenBank:WP_142997331.1;Name=WP_142997331.1;Ontology_term=GO:0009103,GO:0016740;end_range=48613,.;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661828.1;locus_tag=D5F94_RS09585;partial=true;product=LicD family protein;protein_id=WP_142997331.1;transl_table=11 ##sequence-region NZ_QYTD01000018.1 1 22807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000018.1 RefSeq region 1 22807 . + . ID=NZ_QYTD01000018.1:1..22807;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000018.1 RefSeq pseudogene 114 326 . + . ID=gene-D5F94_RS09590;Name=D5F94_RS09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09590;old_locus_tag=D5F94_09595;partial=true;pseudo=true;start_range=.,114 NZ_QYTD01000018.1 Protein Homology CDS 114 326 . + 0 ID=cds-D5F94_RS09590;Parent=gene-D5F94_RS09590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689173.1;locus_tag=D5F94_RS09590;partial=true;product=Maf family protein;pseudo=true;start_range=.,114;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 400 1098 . + . ID=gene-D5F94_RS09595;Name=D5F94_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09595;old_locus_tag=D5F94_09600 NZ_QYTD01000018.1 Protein Homology CDS 400 1098 . + 0 ID=cds-WP_041165668.1;Parent=gene-D5F94_RS09595;Dbxref=GenBank:WP_041165668.1;Name=WP_041165668.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291485.1;locus_tag=D5F94_RS09595;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_041165668.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 1316 1984 . + . ID=gene-D5F94_RS09600;Name=D5F94_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09600;old_locus_tag=D5F94_09605 NZ_QYTD01000018.1 Protein Homology CDS 1316 1984 . + 0 ID=cds-WP_016480576.1;Parent=gene-D5F94_RS09600;Dbxref=GenBank:WP_016480576.1;Name=WP_016480576.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480576.1;locus_tag=D5F94_RS09600;product=response regulator transcription factor;protein_id=WP_016480576.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 1974 2573 . + . ID=gene-D5F94_RS09605;Name=D5F94_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09605;old_locus_tag=D5F94_09610 NZ_QYTD01000018.1 Protein Homology CDS 1974 2573 . + 0 ID=cds-WP_242367465.1;Parent=gene-D5F94_RS09605;Dbxref=GenBank:WP_242367465.1;Name=WP_242367465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480577.1;locus_tag=D5F94_RS09605;product=sensor protein;protein_id=WP_242367465.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 2579 3103 . + . ID=gene-D5F94_RS09610;Name=D5F94_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09610;old_locus_tag=D5F94_09615 NZ_QYTD01000018.1 Protein Homology CDS 2579 3103 . + 0 ID=cds-WP_016480578.1;Parent=gene-D5F94_RS09610;Dbxref=GenBank:WP_016480578.1;Name=WP_016480578.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480578.1;locus_tag=D5F94_RS09610;product=sensor histidine kinase;protein_id=WP_016480578.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 3511 3816 . + . ID=gene-D5F94_RS09615;Name=D5F94_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09615;old_locus_tag=D5F94_09620 NZ_QYTD01000018.1 Protein Homology CDS 3511 3816 . + 0 ID=cds-WP_016480579.1;Parent=gene-D5F94_RS09615;Dbxref=GenBank:WP_016480579.1;Name=WP_016480579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533774.1;locus_tag=D5F94_RS09615;product=hypothetical protein;protein_id=WP_016480579.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 3816 4664 . + . ID=gene-D5F94_RS09620;Name=D5F94_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09620;old_locus_tag=D5F94_09625 NZ_QYTD01000018.1 Protein Homology CDS 3816 4664 . + 0 ID=cds-WP_016480580.1;Parent=gene-D5F94_RS09620;Dbxref=GenBank:WP_016480580.1;Name=WP_016480580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859502.1;locus_tag=D5F94_RS09620;product=hypothetical protein;protein_id=WP_016480580.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 4661 5383 . + . ID=gene-D5F94_RS09625;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=D5F94_RS09625;old_locus_tag=D5F94_09630 NZ_QYTD01000018.1 Protein Homology CDS 4661 5383 . + 0 ID=cds-WP_016480581.1;Parent=gene-D5F94_RS09625;Dbxref=GenBank:WP_016480581.1;Name=WP_016480581.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861304.1;locus_tag=D5F94_RS09625;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_016480581.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 5376 5681 . + . ID=gene-D5F94_RS09630;Name=D5F94_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09630;old_locus_tag=D5F94_09635 NZ_QYTD01000018.1 Protein Homology CDS 5376 5681 . + 0 ID=cds-WP_000611494.1;Parent=gene-D5F94_RS09630;Dbxref=GenBank:WP_000611494.1;Name=WP_000611494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646925.1;locus_tag=D5F94_RS09630;product=phosphopantetheine-binding protein;protein_id=WP_000611494.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 5665 6141 . + . ID=gene-D5F94_RS09635;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=D5F94_RS09635;old_locus_tag=D5F94_09640 NZ_QYTD01000018.1 Protein Homology CDS 5665 6141 . + 0 ID=cds-WP_041165669.1;Parent=gene-D5F94_RS09635;Dbxref=GenBank:WP_041165669.1;Name=WP_041165669.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164166.1;locus_tag=D5F94_RS09635;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_041165669.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 6131 7060 . + . ID=gene-D5F94_RS09640;Name=D5F94_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09640;old_locus_tag=D5F94_09645 NZ_QYTD01000018.1 Protein Homology CDS 6131 7060 . + 0 ID=cds-WP_000403525.1;Parent=gene-D5F94_RS09640;Dbxref=GenBank:WP_000403525.1;Name=WP_000403525.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403526.1;locus_tag=D5F94_RS09640;product=ABC transporter ATP-binding protein;protein_id=WP_000403525.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 7053 7931 . + . ID=gene-D5F94_RS09645;Name=D5F94_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09645;old_locus_tag=D5F94_09650 NZ_QYTD01000018.1 Protein Homology CDS 7053 7931 . + 0 ID=cds-WP_086163281.1;Parent=gene-D5F94_RS09645;Dbxref=GenBank:WP_086163281.1;Name=WP_086163281.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462408.1;locus_tag=D5F94_RS09645;product=ABC transporter permease;protein_id=WP_086163281.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 7928 9928 . + . ID=gene-D5F94_RS09650;Name=D5F94_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09650;old_locus_tag=D5F94_09655 NZ_QYTD01000018.1 Protein Homology CDS 7928 9928 . + 0 ID=cds-WP_124749111.1;Parent=gene-D5F94_RS09650;Dbxref=GenBank:WP_124749111.1;Name=WP_124749111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768304.1;locus_tag=D5F94_RS09650;product=cylE protein;protein_id=WP_124749111.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 9925 10878 . + . ID=gene-D5F94_RS09655;Name=D5F94_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09655;old_locus_tag=D5F94_09660 NZ_QYTD01000018.1 Protein Homology CDS 9925 10878 . + 0 ID=cds-WP_016480585.1;Parent=gene-D5F94_RS09655;Dbxref=GenBank:WP_016480585.1;Name=WP_016480585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647596.1;locus_tag=D5F94_RS09655;product=aminomethyltransferase family protein;protein_id=WP_016480585.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 10875 13070 . + . ID=gene-D5F94_RS09660;Name=D5F94_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09660;old_locus_tag=D5F94_09665 NZ_QYTD01000018.1 Protein Homology CDS 10875 13070 . + 0 ID=cds-WP_016502741.1;Parent=gene-D5F94_RS09660;Dbxref=GenBank:WP_016502741.1;Name=WP_016502741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118219.1;locus_tag=D5F94_RS09660;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_016502741.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 13075 14286 . + . ID=gene-D5F94_RS09665;Name=cylJ;gbkey=Gene;gene=cylJ;gene_biotype=protein_coding;locus_tag=D5F94_RS09665;old_locus_tag=D5F94_09670 NZ_QYTD01000018.1 Protein Homology CDS 13075 14286 . + 0 ID=cds-WP_016502742.1;Parent=gene-D5F94_RS09665;Dbxref=GenBank:WP_016502742.1;Name=WP_016502742.1;gbkey=CDS;gene=cylJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033001.1;locus_tag=D5F94_RS09665;product=glycosyltransferase CylJ;protein_id=WP_016502742.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 14255 14830 . + . ID=gene-D5F94_RS09670;Name=D5F94_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09670;old_locus_tag=D5F94_09675 NZ_QYTD01000018.1 Protein Homology CDS 14255 14830 . + 0 ID=cds-WP_016502743.1;Parent=gene-D5F94_RS09670;Dbxref=GenBank:WP_016502743.1;Name=WP_016502743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068959.1;locus_tag=D5F94_RS09670;product=hypothetical protein;protein_id=WP_016502743.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 15173 15514 . + . ID=gene-D5F94_RS09675;Name=D5F94_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09675;old_locus_tag=D5F94_09680 NZ_QYTD01000018.1 Protein Homology CDS 15173 15514 . + 0 ID=cds-WP_001288728.1;Parent=gene-D5F94_RS09675;Dbxref=GenBank:WP_001288728.1;Name=WP_001288728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288733.1;locus_tag=D5F94_RS09675;product=hypothetical protein;protein_id=WP_001288728.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 15548 18475 . + . ID=gene-D5F94_RS10735;Name=D5F94_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10735 NZ_QYTD01000018.1 Protein Homology CDS 15548 18475 . + 0 ID=cds-WP_375804262.1;Parent=gene-D5F94_RS10735;Dbxref=GenBank:WP_375804262.1;Name=WP_375804262.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.6;locus_tag=D5F94_RS10735;product=S8 family serine peptidase;protein_id=WP_375804262.1;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 18819 22247 . + . ID=gene-D5F94_RS10670;Name=D5F94_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10670 NZ_QYTD01000018.1 Protein Homology CDS 18819 22247 . + 0 ID=cds-WP_260424807.1;Parent=gene-D5F94_RS10670;Dbxref=GenBank:WP_260424807.1;Name=WP_260424807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502745.1;locus_tag=D5F94_RS10670;product=hypothetical protein;protein_id=WP_260424807.1;transl_table=11 NZ_QYTD01000018.1 RefSeq pseudogene 22431 22577 . + . ID=gene-D5F94_RS09685;Name=D5F94_RS09685;end_range=22577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09685;old_locus_tag=D5F94_09690;partial=true;pseudo=true NZ_QYTD01000018.1 Protein Homology CDS 22431 22577 . + 0 ID=cds-D5F94_RS09685;Parent=gene-D5F94_RS09685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873818.1;locus_tag=D5F94_RS09685;partial=true;product=neutral endopeptidase;pseudo=true;transl_table=11 NZ_QYTD01000018.1 RefSeq gene 22612 22807 . - . ID=gene-D5F94_RS09690;Name=D5F94_RS09690;end_range=22807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09690;old_locus_tag=D5F94_09695;partial=true NZ_QYTD01000018.1 Protein Homology CDS 22612 22807 . - 1 ID=cds-WP_142390283.1;Parent=gene-D5F94_RS09690;Dbxref=GenBank:WP_142390283.1;Name=WP_142390283.1;Ontology_term=GO:0015074;end_range=22807,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS09690;partial=true;product=IS3 family transposase;protein_id=WP_142390283.1;transl_table=11 ##sequence-region NZ_QYTD01000019.1 1 21262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000019.1 RefSeq region 1 21262 . + . ID=NZ_QYTD01000019.1:1..21262;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000019.1 RefSeq pseudogene 1 129 . - . ID=gene-D5F94_RS09695;Name=D5F94_RS09695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09695;old_locus_tag=D5F94_09700;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000019.1 Protein Homology CDS 1 129 . - 0 ID=cds-D5F94_RS09695;Parent=gene-D5F94_RS09695;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS09695;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000019.1 RefSeq pseudogene 198 983 . + . ID=gene-D5F94_RS09700;Name=D5F94_RS09700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09700;old_locus_tag=D5F94_09705;partial=true;pseudo=true;start_range=.,198 NZ_QYTD01000019.1 Protein Homology CDS 198 983 . + 0 ID=cds-D5F94_RS09700;Parent=gene-D5F94_RS09700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160532.1;locus_tag=D5F94_RS09700;partial=true;product=IS30-like element ISSag9 family transposase;pseudo=true;start_range=.,198;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 1319 2701 . - . ID=gene-D5F94_RS09705;Name=D5F94_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09705;old_locus_tag=D5F94_09710 NZ_QYTD01000019.1 Protein Homology CDS 1319 2701 . - 0 ID=cds-WP_000958259.1;Parent=gene-D5F94_RS09705;Dbxref=GenBank:WP_000958259.1;Name=WP_000958259.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958256.1;locus_tag=D5F94_RS09705;product=MFS transporter;protein_id=WP_000958259.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 2709 3923 . - . ID=gene-D5F94_RS09710;Name=D5F94_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09710;old_locus_tag=D5F94_09715 NZ_QYTD01000019.1 Protein Homology CDS 2709 3923 . - 0 ID=cds-WP_001262294.1;Parent=gene-D5F94_RS09710;Dbxref=GenBank:WP_001262294.1;Name=WP_001262294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262291.1;locus_tag=D5F94_RS09710;product=M20 family metallopeptidase;protein_id=WP_001262294.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 4182 5087 . + . ID=gene-D5F94_RS09715;Name=D5F94_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09715;old_locus_tag=D5F94_09720 NZ_QYTD01000019.1 Protein Homology CDS 4182 5087 . + 0 ID=cds-WP_180383436.1;Parent=gene-D5F94_RS09715;Dbxref=GenBank:WP_180383436.1;Name=WP_180383436.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768245.1;locus_tag=D5F94_RS09715;product=LysR family transcriptional regulator;protein_id=WP_180383436.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 5148 5501 . + . ID=gene-D5F94_RS09720;Name=D5F94_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09720;old_locus_tag=D5F94_09725 NZ_QYTD01000019.1 Protein Homology CDS 5148 5501 . + 0 ID=cds-WP_000639447.1;Parent=gene-D5F94_RS09720;Dbxref=GenBank:WP_000639447.1;Name=WP_000639447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639445.1;locus_tag=D5F94_RS09720;product=DUF3397 domain-containing protein;protein_id=WP_000639447.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 5530 7245 . - . ID=gene-D5F94_RS09725;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=D5F94_RS09725;old_locus_tag=D5F94_09730 NZ_QYTD01000019.1 Protein Homology CDS 5530 7245 . - 0 ID=cds-WP_124749623.1;Parent=gene-D5F94_RS09725;Dbxref=GenBank:WP_124749623.1;Name=WP_124749623.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=4-aminobenzoate biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647893.1;locus_tag=D5F94_RS09725;product=aminodeoxychorismate synthase component I;protein_id=WP_124749623.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 7327 9777 . - . ID=gene-D5F94_RS09730;Name=D5F94_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09730;old_locus_tag=D5F94_09735 NZ_QYTD01000019.1 Protein Homology CDS 7327 9777 . - 0 ID=cds-WP_000231568.1;Parent=gene-D5F94_RS09730;Dbxref=GenBank:WP_000231568.1;Name=WP_000231568.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231573.1;locus_tag=D5F94_RS09730;product=DNA translocase FtsK;protein_id=WP_000231568.1;transl_table=11 NZ_QYTD01000019.1 RefSeq pseudogene 9943 10747 . + . ID=gene-D5F94_RS09735;Name=D5F94_RS09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09735;old_locus_tag=D5F94_09740;pseudo=true NZ_QYTD01000019.1 Protein Homology CDS 9943 10747 . + 0 ID=cds-D5F94_RS09735;Parent=gene-D5F94_RS09735;Note=frameshifted;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719928.1;locus_tag=D5F94_RS09735;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 10799 11632 . - . ID=gene-D5F94_RS09740;Name=D5F94_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09740;old_locus_tag=D5F94_09745 NZ_QYTD01000019.1 Protein Homology CDS 10799 11632 . - 0 ID=cds-WP_000494350.1;Parent=gene-D5F94_RS09740;Dbxref=GenBank:WP_000494350.1;Name=WP_000494350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494351.1;locus_tag=D5F94_RS09740;product=metal ABC transporter permease;protein_id=WP_000494350.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 11634 12350 . - . ID=gene-D5F94_RS09745;Name=D5F94_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09745;old_locus_tag=D5F94_09750 NZ_QYTD01000019.1 Protein Homology CDS 11634 12350 . - 0 ID=cds-WP_000587174.1;Parent=gene-D5F94_RS09745;Dbxref=GenBank:WP_000587174.1;Name=WP_000587174.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481069.1;locus_tag=D5F94_RS09745;product=metal ABC transporter ATP-binding protein;protein_id=WP_000587174.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 12521 13447 . - . ID=gene-D5F94_RS09750;Name=D5F94_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09750;old_locus_tag=D5F94_09755 NZ_QYTD01000019.1 Protein Homology CDS 12521 13447 . - 0 ID=cds-WP_000759089.1;Parent=gene-D5F94_RS09750;Dbxref=GenBank:WP_000759089.1;Name=WP_000759089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767839.1;locus_tag=D5F94_RS09750;product=metal ABC transporter substrate-binding protein;protein_id=WP_000759089.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 13614 14261 . + . ID=gene-D5F94_RS09755;Name=D5F94_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09755;old_locus_tag=D5F94_09760 NZ_QYTD01000019.1 Protein Homology CDS 13614 14261 . + 0 ID=cds-WP_016503081.1;Parent=gene-D5F94_RS09755;Dbxref=GenBank:WP_016503081.1;Name=WP_016503081.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188484.1;locus_tag=D5F94_RS09755;product=metal-dependent transcriptional regulator;protein_id=WP_016503081.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 14302 14991 . - . ID=gene-D5F94_RS09760;Name=D5F94_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09760;old_locus_tag=D5F94_09765 NZ_QYTD01000019.1 Protein Homology CDS 14302 14991 . - 0 ID=cds-WP_000689759.1;Parent=gene-D5F94_RS09760;Dbxref=GenBank:WP_000689759.1;Name=WP_000689759.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689756.1;locus_tag=D5F94_RS09760;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_000689759.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 15001 15270 . - . ID=gene-D5F94_RS09765;Name=macP;gbkey=Gene;gene=macP;gene_biotype=protein_coding;locus_tag=D5F94_RS09765;old_locus_tag=D5F94_09770 NZ_QYTD01000019.1 Protein Homology CDS 15001 15270 . - 0 ID=cds-WP_000517852.1;Parent=gene-D5F94_RS09765;Dbxref=GenBank:WP_000517852.1;Name=WP_000517852.1;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517852.1;locus_tag=D5F94_RS09765;product=cell wall synthase accessory phosphoprotein MacP;protein_id=WP_000517852.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 15270 15824 . - . ID=gene-D5F94_RS09770;Name=D5F94_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09770;old_locus_tag=D5F94_09775 NZ_QYTD01000019.1 Protein Homology CDS 15270 15824 . - 0 ID=cds-WP_000344991.1;Parent=gene-D5F94_RS09770;Dbxref=GenBank:WP_000344991.1;Name=WP_000344991.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632172.1;locus_tag=D5F94_RS09770;product=NUDIX domain-containing protein;protein_id=WP_000344991.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 15845 17224 . - . ID=gene-D5F94_RS09775;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=D5F94_RS09775;old_locus_tag=D5F94_09780 NZ_QYTD01000019.1 Protein Homology CDS 15845 17224 . - 0 ID=cds-WP_000073778.1;Parent=gene-D5F94_RS09775;Dbxref=GenBank:WP_000073778.1;Name=WP_000073778.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899862.1;locus_tag=D5F94_RS09775;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000073778.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 17468 17881 . - . ID=gene-D5F94_RS09785;Name=D5F94_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09785;old_locus_tag=D5F94_09790 NZ_QYTD01000019.1 Protein Homology CDS 17468 17881 . - 0 ID=cds-WP_016481074.1;Parent=gene-D5F94_RS09785;Dbxref=GenBank:WP_016481074.1;Name=WP_016481074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237565.1;locus_tag=D5F94_RS09785;product=VOC family protein;protein_id=WP_016481074.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 17894 18271 . - . ID=gene-D5F94_RS09790;Name=D5F94_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09790;old_locus_tag=D5F94_09795 NZ_QYTD01000019.1 Protein Homology CDS 17894 18271 . - 0 ID=cds-WP_016503082.1;Parent=gene-D5F94_RS09790;Dbxref=GenBank:WP_016503082.1;Name=WP_016503082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625774.1;locus_tag=D5F94_RS09790;product=VOC family protein;protein_id=WP_016503082.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 18360 19316 . - . ID=gene-D5F94_RS09795;Name=D5F94_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09795;old_locus_tag=D5F94_09800 NZ_QYTD01000019.1 Protein Homology CDS 18360 19316 . - 0 ID=cds-WP_000762186.1;Parent=gene-D5F94_RS09795;Dbxref=GenBank:WP_000762186.1;Name=WP_000762186.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481075.1;locus_tag=D5F94_RS09795;product=Gfo/Idh/MocA family protein;protein_id=WP_000762186.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 19313 19765 . - . ID=gene-D5F94_RS09800;Name=D5F94_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09800;old_locus_tag=D5F94_09805 NZ_QYTD01000019.1 Protein Homology CDS 19313 19765 . - 0 ID=cds-WP_016503083.1;Parent=gene-D5F94_RS09800;Dbxref=GenBank:WP_016503083.1;Name=WP_016503083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647214.1;locus_tag=D5F94_RS09800;product=ASCH domain-containing protein;protein_id=WP_016503083.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 19762 20007 . - . ID=gene-D5F94_RS09805;Name=D5F94_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09805;old_locus_tag=D5F94_09810 NZ_QYTD01000019.1 Protein Homology CDS 19762 20007 . - 0 ID=cds-WP_001233823.1;Parent=gene-D5F94_RS09805;Dbxref=GenBank:WP_001233823.1;Name=WP_001233823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233822.1;locus_tag=D5F94_RS09805;product=DUF3977 family protein;protein_id=WP_001233823.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 20004 20702 . - . ID=gene-D5F94_RS09810;Name=D5F94_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09810;old_locus_tag=D5F94_09815 NZ_QYTD01000019.1 Protein Homology CDS 20004 20702 . - 0 ID=cds-WP_016503084.1;Parent=gene-D5F94_RS09810;Dbxref=GenBank:WP_016503084.1;Name=WP_016503084.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002990841.1;locus_tag=D5F94_RS09810;product=3-oxoacyl-ACP reductase;protein_id=WP_016503084.1;transl_table=11 NZ_QYTD01000019.1 RefSeq gene 20695 20931 . - . ID=gene-D5F94_RS09815;Name=D5F94_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09815;old_locus_tag=D5F94_09820 NZ_QYTD01000019.1 Protein Homology CDS 20695 20931 . - 0 ID=cds-WP_000141918.1;Parent=gene-D5F94_RS09815;Dbxref=GenBank:WP_000141918.1;Name=WP_000141918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018367459.1;locus_tag=D5F94_RS09815;product=DUF2829 domain-containing protein;protein_id=WP_000141918.1;transl_table=11 ##sequence-region NZ_QYTD01000002.1 1 65055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000002.1 RefSeq region 1 65055 . + . ID=NZ_QYTD01000002.1:1..65055;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000002.1 RefSeq gene 580 966 . - . ID=gene-D5F94_RS01490;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=D5F94_RS01490;old_locus_tag=D5F94_01490 NZ_QYTD01000002.1 Protein Homology CDS 580 966 . - 0 ID=cds-WP_000331497.1;Parent=gene-D5F94_RS01490;Dbxref=GenBank:WP_000331497.1;Name=WP_000331497.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=D5F94_RS01490;product=50S ribosomal protein L17;protein_id=WP_000331497.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 981 1919 . - . ID=gene-D5F94_RS01495;Name=D5F94_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01495;old_locus_tag=D5F94_01495 NZ_QYTD01000002.1 Protein Homology CDS 981 1919 . - 0 ID=cds-WP_000568977.1;Parent=gene-D5F94_RS01495;Dbxref=GenBank:WP_000568977.1;Name=WP_000568977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=D5F94_RS01495;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_000568977.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 1969 2352 . - . ID=gene-D5F94_RS01500;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=D5F94_RS01500;old_locus_tag=D5F94_01500 NZ_QYTD01000002.1 Protein Homology CDS 1969 2352 . - 0 ID=cds-WP_001118387.1;Parent=gene-D5F94_RS01500;Dbxref=GenBank:WP_001118387.1;Name=WP_001118387.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=D5F94_RS01500;product=30S ribosomal protein S11;protein_id=WP_001118387.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 2370 2735 . - . ID=gene-D5F94_RS01505;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=D5F94_RS01505;old_locus_tag=D5F94_01505 NZ_QYTD01000002.1 Protein Homology CDS 2370 2735 . - 0 ID=cds-WP_000090785.1;Parent=gene-D5F94_RS01505;Dbxref=GenBank:WP_000090785.1;Name=WP_000090785.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=D5F94_RS01505;product=30S ribosomal protein S13;protein_id=WP_000090785.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 2753 2869 . - . ID=gene-D5F94_RS01510;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=D5F94_RS01510;old_locus_tag=D5F94_01510 NZ_QYTD01000002.1 Protein Homology CDS 2753 2869 . - 0 ID=cds-WP_000868345.1;Parent=gene-D5F94_RS01510;Dbxref=GenBank:WP_000868345.1;Name=WP_000868345.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=D5F94_RS01510;product=50S ribosomal protein L36;protein_id=WP_000868345.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 2895 3113 . - . ID=gene-D5F94_RS01515;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=D5F94_RS01515;old_locus_tag=D5F94_01515 NZ_QYTD01000002.1 Protein Homology CDS 2895 3113 . - 0 ID=cds-WP_001040189.1;Parent=gene-D5F94_RS01515;Dbxref=GenBank:WP_001040189.1;Name=WP_001040189.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1;locus_tag=D5F94_RS01515;product=translation initiation factor IF-1;protein_id=WP_001040189.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 3229 3867 . - . ID=gene-D5F94_RS01520;Name=D5F94_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01520;old_locus_tag=D5F94_01520 NZ_QYTD01000002.1 Protein Homology CDS 3229 3867 . - 0 ID=cds-WP_001050419.1;Parent=gene-D5F94_RS01520;Dbxref=GenBank:WP_001050419.1;Name=WP_001050419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050422.1;locus_tag=D5F94_RS01520;product=adenylate kinase;protein_id=WP_001050419.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 3962 5266 . - . ID=gene-D5F94_RS01525;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=D5F94_RS01525;old_locus_tag=D5F94_01525 NZ_QYTD01000002.1 Protein Homology CDS 3962 5266 . - 0 ID=cds-WP_016502396.1;Parent=gene-D5F94_RS01525;Dbxref=GenBank:WP_016502396.1;Name=WP_016502396.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631723.1;locus_tag=D5F94_RS01525;product=preprotein translocase subunit SecY;protein_id=WP_016502396.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 5287 5727 . - . ID=gene-D5F94_RS01530;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=D5F94_RS01530;old_locus_tag=D5F94_01530 NZ_QYTD01000002.1 Protein Homology CDS 5287 5727 . - 0 ID=cds-WP_000766093.1;Parent=gene-D5F94_RS01530;Dbxref=GenBank:WP_000766093.1;Name=WP_000766093.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1;locus_tag=D5F94_RS01530;product=50S ribosomal protein L15;protein_id=WP_000766093.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 5852 6031 . - . ID=gene-D5F94_RS01535;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=D5F94_RS01535;old_locus_tag=D5F94_01535 NZ_QYTD01000002.1 Protein Homology CDS 5852 6031 . - 0 ID=cds-WP_000057245.1;Parent=gene-D5F94_RS01535;Dbxref=GenBank:WP_000057245.1;Name=WP_000057245.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057245.1;locus_tag=D5F94_RS01535;product=50S ribosomal protein L30;protein_id=WP_000057245.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 6046 6540 . - . ID=gene-D5F94_RS01540;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=D5F94_RS01540;old_locus_tag=D5F94_01540 NZ_QYTD01000002.1 Protein Homology CDS 6046 6540 . - 0 ID=cds-WP_124749340.1;Parent=gene-D5F94_RS01540;Dbxref=GenBank:WP_124749340.1;Name=WP_124749340.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=D5F94_RS01540;product=30S ribosomal protein S5;protein_id=WP_124749340.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 6559 6915 . - . ID=gene-D5F94_RS01545;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=D5F94_RS01545;old_locus_tag=D5F94_01545 NZ_QYTD01000002.1 Protein Homology CDS 6559 6915 . - 0 ID=cds-WP_001865622.1;Parent=gene-D5F94_RS01545;Dbxref=GenBank:WP_001865622.1;Name=WP_001865622.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374469.1;locus_tag=D5F94_RS01545;product=50S ribosomal protein L18;protein_id=WP_001865622.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 7016 7552 . - . ID=gene-D5F94_RS01550;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=D5F94_RS01550;old_locus_tag=D5F94_01550 NZ_QYTD01000002.1 Protein Homology CDS 7016 7552 . - 0 ID=cds-WP_000086620.1;Parent=gene-D5F94_RS01550;Dbxref=GenBank:WP_000086620.1;Name=WP_000086620.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=D5F94_RS01550;product=50S ribosomal protein L6;protein_id=WP_000086620.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 7662 8060 . - . ID=gene-D5F94_RS01555;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=D5F94_RS01555;old_locus_tag=D5F94_01555 NZ_QYTD01000002.1 Protein Homology CDS 7662 8060 . - 0 ID=cds-WP_000245501.1;Parent=gene-D5F94_RS01555;Dbxref=GenBank:WP_000245501.1;Name=WP_000245501.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=D5F94_RS01555;product=30S ribosomal protein S8;protein_id=WP_000245501.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 8215 8400 . - . ID=gene-D5F94_RS01560;Name=D5F94_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01560;old_locus_tag=D5F94_01560 NZ_QYTD01000002.1 Protein Homology CDS 8215 8400 . - 0 ID=cds-WP_001085698.1;Parent=gene-D5F94_RS01560;Dbxref=GenBank:WP_001085698.1;Name=WP_001085698.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=D5F94_RS01560;product=type Z 30S ribosomal protein S14;protein_id=WP_001085698.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 8418 8960 . - . ID=gene-D5F94_RS01565;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=D5F94_RS01565;old_locus_tag=D5F94_01565 NZ_QYTD01000002.1 Protein Homology CDS 8418 8960 . - 0 ID=cds-WP_000013545.1;Parent=gene-D5F94_RS01565;Dbxref=GenBank:WP_000013545.1;Name=WP_000013545.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=D5F94_RS01565;product=50S ribosomal protein L5;protein_id=WP_000013545.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 8984 9289 . - . ID=gene-D5F94_RS01570;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=D5F94_RS01570;old_locus_tag=D5F94_01570 NZ_QYTD01000002.1 Protein Homology CDS 8984 9289 . - 0 ID=cds-WP_000497687.1;Parent=gene-D5F94_RS01570;Dbxref=GenBank:WP_000497687.1;Name=WP_000497687.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=D5F94_RS01570;product=50S ribosomal protein L24;protein_id=WP_000497687.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 9369 9737 . - . ID=gene-D5F94_RS01575;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=D5F94_RS01575;old_locus_tag=D5F94_01575 NZ_QYTD01000002.1 Protein Homology CDS 9369 9737 . - 0 ID=cds-WP_000615920.1;Parent=gene-D5F94_RS01575;Dbxref=GenBank:WP_000615920.1;Name=WP_000615920.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=D5F94_RS01575;product=50S ribosomal protein L14;protein_id=WP_000615920.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 9762 10022 . - . ID=gene-D5F94_RS01580;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=D5F94_RS01580;old_locus_tag=D5F94_01580 NZ_QYTD01000002.1 Protein Homology CDS 9762 10022 . - 0 ID=cds-WP_000440811.1;Parent=gene-D5F94_RS01580;Dbxref=GenBank:WP_000440811.1;Name=WP_000440811.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=D5F94_RS01580;product=30S ribosomal protein S17;protein_id=WP_000440811.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 10048 10254 . - . ID=gene-D5F94_RS01585;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=D5F94_RS01585;old_locus_tag=D5F94_01585 NZ_QYTD01000002.1 Protein Homology CDS 10048 10254 . - 0 ID=cds-WP_000775731.1;Parent=gene-D5F94_RS01585;Dbxref=GenBank:WP_000775731.1;Name=WP_000775731.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739716.1;locus_tag=D5F94_RS01585;product=50S ribosomal protein L29;protein_id=WP_000775731.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 10264 10677 . - . ID=gene-D5F94_RS01590;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=D5F94_RS01590;old_locus_tag=D5F94_01590 NZ_QYTD01000002.1 Protein Homology CDS 10264 10677 . - 0 ID=cds-WP_000960950.1;Parent=gene-D5F94_RS01590;Dbxref=GenBank:WP_000960950.1;Name=WP_000960950.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=D5F94_RS01590;product=50S ribosomal protein L16;protein_id=WP_000960950.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 10681 11334 . - . ID=gene-D5F94_RS01595;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=D5F94_RS01595;old_locus_tag=D5F94_01595 NZ_QYTD01000002.1 Protein Homology CDS 10681 11334 . - 0 ID=cds-WP_000529929.1;Parent=gene-D5F94_RS01595;Dbxref=GenBank:WP_000529929.1;Name=WP_000529929.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=D5F94_RS01595;product=30S ribosomal protein S3;protein_id=WP_000529929.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 11347 11691 . - . ID=gene-D5F94_RS01600;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=D5F94_RS01600;old_locus_tag=D5F94_01600 NZ_QYTD01000002.1 Protein Homology CDS 11347 11691 . - 0 ID=cds-WP_000818141.1;Parent=gene-D5F94_RS01600;Dbxref=GenBank:WP_000818141.1;Name=WP_000818141.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=D5F94_RS01600;product=50S ribosomal protein L22;protein_id=WP_000818141.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 11707 11985 . - . ID=gene-D5F94_RS01605;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=D5F94_RS01605;old_locus_tag=D5F94_01605 NZ_QYTD01000002.1 Protein Homology CDS 11707 11985 . - 0 ID=cds-WP_000533765.1;Parent=gene-D5F94_RS01605;Dbxref=GenBank:WP_000533765.1;Name=WP_000533765.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=D5F94_RS01605;product=30S ribosomal protein S19;protein_id=WP_000533765.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 12083 12916 . - . ID=gene-D5F94_RS01610;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=D5F94_RS01610;old_locus_tag=D5F94_01610 NZ_QYTD01000002.1 Protein Homology CDS 12083 12916 . - 0 ID=cds-WP_000511737.1;Parent=gene-D5F94_RS01610;Dbxref=GenBank:WP_000511737.1;Name=WP_000511737.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=D5F94_RS01610;product=50S ribosomal protein L2;protein_id=WP_000511737.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 12934 13230 . - . ID=gene-D5F94_RS01615;Name=D5F94_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01615;old_locus_tag=D5F94_01615 NZ_QYTD01000002.1 Protein Homology CDS 12934 13230 . - 0 ID=cds-WP_016502395.1;Parent=gene-D5F94_RS01615;Dbxref=GenBank:WP_016502395.1;Name=WP_016502395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739217.1;locus_tag=D5F94_RS01615;product=50S ribosomal protein L23;protein_id=WP_016502395.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 13230 13853 . - . ID=gene-D5F94_RS01620;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=D5F94_RS01620;old_locus_tag=D5F94_01620 NZ_QYTD01000002.1 Protein Homology CDS 13230 13853 . - 0 ID=cds-WP_000024418.1;Parent=gene-D5F94_RS01620;Dbxref=GenBank:WP_000024418.1;Name=WP_000024418.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=D5F94_RS01620;product=50S ribosomal protein L4;protein_id=WP_000024418.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 13877 14503 . - . ID=gene-D5F94_RS01625;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=D5F94_RS01625;old_locus_tag=D5F94_01625 NZ_QYTD01000002.1 Protein Homology CDS 13877 14503 . - 0 ID=cds-WP_000160205.1;Parent=gene-D5F94_RS01625;Dbxref=GenBank:WP_000160205.1;Name=WP_000160205.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=D5F94_RS01625;product=50S ribosomal protein L3;protein_id=WP_000160205.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 14608 14916 . - . ID=gene-D5F94_RS01630;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=D5F94_RS01630;old_locus_tag=D5F94_01630 NZ_QYTD01000002.1 Protein Homology CDS 14608 14916 . - 0 ID=cds-WP_001284518.1;Parent=gene-D5F94_RS01630;Dbxref=GenBank:WP_001284518.1;Name=WP_001284518.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=D5F94_RS01630;product=30S ribosomal protein S10;protein_id=WP_001284518.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 15122 16402 . - . ID=gene-D5F94_RS01635;Name=D5F94_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01635;old_locus_tag=D5F94_01635 NZ_QYTD01000002.1 Protein Homology CDS 15122 16402 . - 0 ID=cds-WP_086163177.1;Parent=gene-D5F94_RS01635;Dbxref=GenBank:WP_086163177.1;Name=WP_086163177.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270709.1;locus_tag=D5F94_RS01635;product=MATE family efflux transporter;protein_id=WP_086163177.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 16507 17997 . - . ID=gene-D5F94_RS01640;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=D5F94_RS01640;old_locus_tag=D5F94_01640 NZ_QYTD01000002.1 Protein Homology CDS 16507 17997 . - 0 ID=cds-WP_016502393.1;Parent=gene-D5F94_RS01640;Dbxref=GenBank:WP_016502393.1;Name=WP_016502393.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029130.1;locus_tag=D5F94_RS01640;product=threonine synthase;protein_id=WP_016502393.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 18117 19133 . - . ID=gene-D5F94_RS01645;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=D5F94_RS01645;old_locus_tag=D5F94_01645 NZ_QYTD01000002.1 Protein Homology CDS 18117 19133 . - 0 ID=cds-WP_000649193.1;Parent=gene-D5F94_RS01645;Dbxref=GenBank:WP_000649193.1;Name=WP_000649193.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649198.1;locus_tag=D5F94_RS01645;product=alcohol dehydrogenase AdhP;protein_id=WP_000649193.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 19312 21954 . - . ID=gene-D5F94_RS01650;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=D5F94_RS01650;old_locus_tag=D5F94_01650 NZ_QYTD01000002.1 Protein Homology CDS 19312 21954 . - 0 ID=cds-WP_016502392.1;Parent=gene-D5F94_RS01650;Dbxref=GenBank:WP_016502392.1;Name=WP_016502392.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011888528.1;locus_tag=D5F94_RS01650;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_016502392.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 22223 24001 . - . ID=gene-D5F94_RS01655;Name=D5F94_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01655;old_locus_tag=D5F94_01655 NZ_QYTD01000002.1 Protein Homology CDS 22223 24001 . - 0 ID=cds-WP_016502391.1;Parent=gene-D5F94_RS01655;Dbxref=GenBank:WP_016502391.1;Name=WP_016502391.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220914.1;locus_tag=D5F94_RS01655;product=acyltransferase family protein;protein_id=WP_016502391.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 23998 24378 . - . ID=gene-D5F94_RS01660;Name=D5F94_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01660;old_locus_tag=D5F94_01660 NZ_QYTD01000002.1 Protein Homology CDS 23998 24378 . - 0 ID=cds-WP_000787702.1;Parent=gene-D5F94_RS01660;Dbxref=GenBank:WP_000787702.1;Name=WP_000787702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787700.1;locus_tag=D5F94_RS01660;product=membrane protein;protein_id=WP_000787702.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 24385 24822 . - . ID=gene-D5F94_RS01665;Name=D5F94_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01665;old_locus_tag=D5F94_01665 NZ_QYTD01000002.1 Protein Homology CDS 24385 24822 . - 0 ID=cds-WP_016502390.1;Parent=gene-D5F94_RS01665;Dbxref=GenBank:WP_016502390.1;Name=WP_016502390.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058280.1;locus_tag=D5F94_RS01665;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_016502390.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 24974 25972 . - . ID=gene-D5F94_RS01670;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=D5F94_RS01670;old_locus_tag=D5F94_01670 NZ_QYTD01000002.1 Protein Homology CDS 24974 25972 . - 0 ID=cds-WP_000196633.1;Parent=gene-D5F94_RS01670;Dbxref=GenBank:WP_000196633.1;Name=WP_000196633.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001902090.1;locus_tag=D5F94_RS01670;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000196633.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 26269 27180 . - . ID=gene-D5F94_RS01675;Name=D5F94_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01675;old_locus_tag=D5F94_01675 NZ_QYTD01000002.1 Protein Homology CDS 26269 27180 . - 0 ID=cds-WP_124749341.1;Parent=gene-D5F94_RS01675;Dbxref=GenBank:WP_124749341.1;Name=WP_124749341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631716.1;locus_tag=D5F94_RS01675;product=helix-turn-helix domain-containing protein;protein_id=WP_124749341.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 27333 28631 . - . ID=gene-D5F94_RS01680;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=D5F94_RS01680;old_locus_tag=D5F94_01680 NZ_QYTD01000002.1 Protein Homology CDS 27333 28631 . - 0 ID=cds-WP_016502387.1;Parent=gene-D5F94_RS01680;Dbxref=GenBank:WP_016502387.1;Name=WP_016502387.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572892.1;locus_tag=D5F94_RS01680;product=adenylosuccinate lyase;protein_id=WP_016502387.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 28892 31426 . - . ID=gene-D5F94_RS01685;Name=D5F94_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01685;old_locus_tag=D5F94_01685 NZ_QYTD01000002.1 Protein Homology CDS 28892 31426 . - 0 ID=cds-WP_180383420.1;Parent=gene-D5F94_RS01685;Dbxref=GenBank:WP_180383420.1;Name=WP_180383420.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=D5F94_RS01685;product=DEAD/DEAH box helicase;protein_id=WP_180383420.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 31476 32549 . - . ID=gene-D5F94_RS01690;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=D5F94_RS01690;old_locus_tag=D5F94_01690 NZ_QYTD01000002.1 Protein Homology CDS 31476 32549 . - 0 ID=cds-WP_086163173.1;Parent=gene-D5F94_RS01690;Dbxref=GenBank:WP_086163173.1;Name=WP_086163173.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297771.1;locus_tag=D5F94_RS01690;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_086163173.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 32536 33024 . - . ID=gene-D5F94_RS01695;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=D5F94_RS01695;old_locus_tag=D5F94_01695 NZ_QYTD01000002.1 Protein Homology CDS 32536 33024 . - 0 ID=cds-WP_016502384.1;Parent=gene-D5F94_RS01695;Dbxref=GenBank:WP_016502384.1;Name=WP_016502384.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011888522.1;locus_tag=D5F94_RS01695;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_016502384.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 33236 34501 . - . ID=gene-D5F94_RS01700;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=D5F94_RS01700;old_locus_tag=D5F94_01700 NZ_QYTD01000002.1 Protein Homology CDS 33236 34501 . - 0 ID=cds-WP_124749342.1;Parent=gene-D5F94_RS01700;Dbxref=GenBank:WP_124749342.1;Name=WP_124749342.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502383.1;locus_tag=D5F94_RS01700;product=phosphoribosylamine--glycine ligase;protein_id=WP_124749342.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 34784 35587 . + . ID=gene-D5F94_RS01705;Name=D5F94_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01705;old_locus_tag=D5F94_01705 NZ_QYTD01000002.1 Protein Homology CDS 34784 35587 . + 0 ID=cds-WP_124749343.1;Parent=gene-D5F94_RS01705;Dbxref=GenBank:WP_124749343.1;Name=WP_124749343.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158185.1;locus_tag=D5F94_RS01705;product=MurR/RpiR family transcriptional regulator;protein_id=WP_124749343.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 35610 36587 . - . ID=gene-D5F94_RS01710;Name=D5F94_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01710;old_locus_tag=D5F94_01710 NZ_QYTD01000002.1 Protein Homology CDS 35610 36587 . - 0 ID=cds-WP_000573443.1;Parent=gene-D5F94_RS01710;Dbxref=GenBank:WP_000573443.1;Name=WP_000573443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573447.1;locus_tag=D5F94_RS01710;product=alpha/beta fold hydrolase;protein_id=WP_000573443.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 36595 37476 . - . ID=gene-D5F94_RS01715;Name=D5F94_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01715;old_locus_tag=D5F94_01715 NZ_QYTD01000002.1 Protein Homology CDS 36595 37476 . - 0 ID=cds-WP_016502382.1;Parent=gene-D5F94_RS01715;Dbxref=GenBank:WP_016502382.1;Name=WP_016502382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198864.1;locus_tag=D5F94_RS01715;product=ROK family protein;protein_id=WP_016502382.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 37493 38410 . - . ID=gene-D5F94_RS01720;Name=D5F94_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01720;old_locus_tag=D5F94_01720 NZ_QYTD01000002.1 Protein Homology CDS 37493 38410 . - 0 ID=cds-WP_124749344.1;Parent=gene-D5F94_RS01720;Dbxref=GenBank:WP_124749344.1;Name=WP_124749344.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654097.1;locus_tag=D5F94_RS01720;product=dihydrodipicolinate synthase family protein;protein_id=WP_124749344.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 38407 39069 . - . ID=gene-D5F94_RS01725;Name=D5F94_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01725;old_locus_tag=D5F94_01725 NZ_QYTD01000002.1 Protein Homology CDS 38407 39069 . - 0 ID=cds-WP_016502380.1;Parent=gene-D5F94_RS01725;Dbxref=GenBank:WP_016502380.1;Name=WP_016502380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710138.1;locus_tag=D5F94_RS01725;product=YesL family protein;protein_id=WP_016502380.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 39089 39532 . - . ID=gene-D5F94_RS01730;Name=D5F94_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01730;old_locus_tag=D5F94_01730 NZ_QYTD01000002.1 Protein Homology CDS 39089 39532 . - 0 ID=cds-WP_016502379.1;Parent=gene-D5F94_RS01730;Dbxref=GenBank:WP_016502379.1;Name=WP_016502379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502379.1;locus_tag=D5F94_RS01730;product=YhcH/YjgK/YiaL family protein;protein_id=WP_016502379.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 39545 40375 . - . ID=gene-D5F94_RS01735;Name=D5F94_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01735;old_locus_tag=D5F94_01735 NZ_QYTD01000002.1 Protein Homology CDS 39545 40375 . - 0 ID=cds-WP_086163172.1;Parent=gene-D5F94_RS01735;Dbxref=GenBank:WP_086163172.1;Name=WP_086163172.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767339.1;locus_tag=D5F94_RS01735;product=carbohydrate ABC transporter permease;protein_id=WP_086163172.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 40385 41272 . - . ID=gene-D5F94_RS01740;Name=D5F94_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01740;old_locus_tag=D5F94_01740 NZ_QYTD01000002.1 Protein Homology CDS 40385 41272 . - 0 ID=cds-WP_001260027.1;Parent=gene-D5F94_RS01740;Dbxref=GenBank:WP_001260027.1;Name=WP_001260027.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041053.1;locus_tag=D5F94_RS01740;product=carbohydrate ABC transporter permease;protein_id=WP_001260027.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 41360 42676 . - . ID=gene-D5F94_RS01745;Name=D5F94_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01745;old_locus_tag=D5F94_01745 NZ_QYTD01000002.1 Protein Homology CDS 41360 42676 . - 0 ID=cds-WP_000023462.1;Parent=gene-D5F94_RS01745;Dbxref=GenBank:WP_000023462.1;Name=WP_000023462.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023460.1;locus_tag=D5F94_RS01745;product=ABC transporter substrate-binding protein;protein_id=WP_000023462.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 42723 43421 . - . ID=gene-D5F94_RS01750;Name=D5F94_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01750;old_locus_tag=D5F94_01750 NZ_QYTD01000002.1 Protein Homology CDS 42723 43421 . - 0 ID=cds-WP_001120327.1;Parent=gene-D5F94_RS01750;Dbxref=GenBank:WP_001120327.1;Name=WP_001120327.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480161.1;locus_tag=D5F94_RS01750;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001120327.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 43668 44972 . - . ID=gene-D5F94_RS01755;Name=sip;gbkey=Gene;gene=sip;gene_biotype=protein_coding;locus_tag=D5F94_RS01755;old_locus_tag=D5F94_01755 NZ_QYTD01000002.1 Protein Homology CDS 43668 44972 . - 0 ID=cds-WP_000783424.1;Parent=gene-D5F94_RS01755;Dbxref=GenBank:WP_000783424.1;Name=WP_000783424.1;gbkey=CDS;gene=sip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783421.1;locus_tag=D5F94_RS01755;product=surface immunogenic protein Sip;protein_id=WP_000783424.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 45119 46018 . - . ID=gene-D5F94_RS01760;Name=D5F94_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01760;old_locus_tag=D5F94_01760 NZ_QYTD01000002.1 Protein Homology CDS 45119 46018 . - 0 ID=cds-WP_001045909.1;Parent=gene-D5F94_RS01760;Dbxref=GenBank:WP_001045909.1;Name=WP_001045909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001045916.1;locus_tag=D5F94_RS01760;product=lytic exoenzyme target recognition domain-containing protein;protein_id=WP_001045909.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 46210 47757 . - . ID=gene-D5F94_RS01765;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=D5F94_RS01765;old_locus_tag=D5F94_01765 NZ_QYTD01000002.1 Protein Homology CDS 46210 47757 . - 0 ID=cds-WP_124749345.1;Parent=gene-D5F94_RS01765;Dbxref=GenBank:WP_124749345.1;Name=WP_124749345.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=D5F94_RS01765;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_124749345.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 47777 48529 . - . ID=gene-D5F94_RS01770;Name=D5F94_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01770;old_locus_tag=D5F94_01770 NZ_QYTD01000002.1 Protein Homology CDS 47777 48529 . - 0 ID=cds-WP_124749346.1;Parent=gene-D5F94_RS01770;Dbxref=GenBank:WP_124749346.1;Name=WP_124749346.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780023.1;locus_tag=D5F94_RS01770;product=GNAT family N-acetyltransferase;protein_id=WP_124749346.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 48552 49100 . - . ID=gene-D5F94_RS01775;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=D5F94_RS01775;old_locus_tag=D5F94_01775 NZ_QYTD01000002.1 Protein Homology CDS 48552 49100 . - 0 ID=cds-WP_016502375.1;Parent=gene-D5F94_RS01775;Dbxref=GenBank:WP_016502375.1;Name=WP_016502375.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502375.1;locus_tag=D5F94_RS01775;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_016502375.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 49268 50290 . - . ID=gene-D5F94_RS01780;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=D5F94_RS01780;old_locus_tag=D5F94_01780 NZ_QYTD01000002.1 Protein Homology CDS 49268 50290 . - 0 ID=cds-WP_016480156.1;Parent=gene-D5F94_RS01780;Dbxref=GenBank:WP_016480156.1;Name=WP_016480156.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480156.1;locus_tag=D5F94_RS01780;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_016480156.1;transl_table=11 NZ_QYTD01000002.1 RefSeq pseudogene 50318 51768 . - . ID=gene-D5F94_RS01785;Name=purF;gbkey=Gene;gene=purF;gene_biotype=pseudogene;locus_tag=D5F94_RS01785;old_locus_tag=D5F94_01785;pseudo=true NZ_QYTD01000002.1 Protein Homology CDS 50318 51768 . - 0 ID=cds-D5F94_RS01785;Parent=gene-D5F94_RS01785;Note=frameshifted;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480155.1;locus_tag=D5F94_RS01785;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000002.1 RefSeq pseudogene 52002 55727 . - . ID=gene-D5F94_RS01790;Name=D5F94_RS01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS01790;old_locus_tag=D5F94_01790;pseudo=true NZ_QYTD01000002.1 Protein Homology CDS 52002 55727 . - 0 ID=cds-D5F94_RS01790;Parent=gene-D5F94_RS01790;Note=internal stop;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361233.1;locus_tag=D5F94_RS01790;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 55850 56554 . - . ID=gene-D5F94_RS01795;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=D5F94_RS01795;old_locus_tag=D5F94_01795 NZ_QYTD01000002.1 Protein Homology CDS 55850 56554 . - 0 ID=cds-WP_016480151.1;Parent=gene-D5F94_RS01795;Dbxref=GenBank:WP_016480151.1;Name=WP_016480151.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648569.1;locus_tag=D5F94_RS01795;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_016480151.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 56678 56917 . - . ID=gene-D5F94_RS01800;Name=D5F94_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01800;old_locus_tag=D5F94_01800 NZ_QYTD01000002.1 Protein Homology CDS 56678 56917 . - 0 ID=cds-WP_000085641.1;Parent=gene-D5F94_RS01800;Dbxref=GenBank:WP_000085641.1;Name=WP_000085641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085641.1;locus_tag=D5F94_RS01800;product=phosphopantetheine-binding protein;protein_id=WP_000085641.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 56928 57920 . - . ID=gene-D5F94_RS01805;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=D5F94_RS01805;old_locus_tag=D5F94_01805 NZ_QYTD01000002.1 Protein Homology CDS 56928 57920 . - 0 ID=cds-WP_000717415.1;Parent=gene-D5F94_RS01805;Dbxref=GenBank:WP_000717415.1;Name=WP_000717415.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716823.1;locus_tag=D5F94_RS01805;product=phosphate acyltransferase PlsX;protein_id=WP_000717415.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 57998 58876 . - . ID=gene-D5F94_RS01810;Name=D5F94_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01810;old_locus_tag=D5F94_01810 NZ_QYTD01000002.1 Protein Homology CDS 57998 58876 . - 0 ID=cds-WP_185690638.1;Parent=gene-D5F94_RS01810;Dbxref=GenBank:WP_185690638.1;Name=WP_185690638.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420133.1;locus_tag=D5F94_RS01810;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_185690638.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 58939 59700 . - . ID=gene-D5F94_RS01815;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=D5F94_RS01815;old_locus_tag=D5F94_01815 NZ_QYTD01000002.1 Protein Homology CDS 58939 59700 . - 0 ID=cds-WP_001266269.1;Parent=gene-D5F94_RS01815;Dbxref=GenBank:WP_001266269.1;Name=WP_001266269.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649246.1;locus_tag=D5F94_RS01815;product=DNA repair protein RecO;protein_id=WP_001266269.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 59690 60865 . - . ID=gene-D5F94_RS01820;Name=D5F94_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01820;old_locus_tag=D5F94_01820 NZ_QYTD01000002.1 Protein Homology CDS 59690 60865 . - 0 ID=cds-WP_000171460.1;Parent=gene-D5F94_RS01820;Dbxref=GenBank:WP_000171460.1;Name=WP_000171460.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171461.1;locus_tag=D5F94_RS01820;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000171460.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 60973 61941 . - . ID=gene-D5F94_RS01825;Name=D5F94_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01825;old_locus_tag=D5F94_01825 NZ_QYTD01000002.1 Protein Homology CDS 60973 61941 . - 0 ID=cds-WP_016502368.1;Parent=gene-D5F94_RS01825;Dbxref=GenBank:WP_016502368.1;Name=WP_016502368.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122447.1;locus_tag=D5F94_RS01825;product=ribose-phosphate diphosphokinase;protein_id=WP_016502368.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 62065 63402 . - . ID=gene-D5F94_RS01830;Name=D5F94_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01830;old_locus_tag=D5F94_01830 NZ_QYTD01000002.1 Protein Homology CDS 62065 63402 . - 0 ID=cds-WP_000746075.1;Parent=gene-D5F94_RS01830;Dbxref=GenBank:WP_000746075.1;Name=WP_000746075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646828.1;locus_tag=D5F94_RS01830;product=PcsB-like coiled-coil domain-containing protein;protein_id=WP_000746075.1;transl_table=11 NZ_QYTD01000002.1 RefSeq gene 63638 63725 . - . ID=gene-D5F94_RS01835;Name=D5F94_RS01835;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01835;old_locus_tag=D5F94_01835 NZ_QYTD01000002.1 tRNAscan-SE tRNA 63638 63725 . - . ID=rna-D5F94_RS01835;Parent=gene-D5F94_RS01835;anticodon=(pos:complement(63689..63691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01835;product=tRNA-Ser NZ_QYTD01000002.1 tRNAscan-SE exon 63638 63725 . - . ID=exon-D5F94_RS01835-1;Parent=rna-D5F94_RS01835;anticodon=(pos:complement(63689..63691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01835;product=tRNA-Ser NZ_QYTD01000002.1 RefSeq gene 63739 63812 . - . ID=gene-D5F94_RS01840;Name=D5F94_RS01840;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01840;old_locus_tag=D5F94_01840 NZ_QYTD01000002.1 tRNAscan-SE tRNA 63739 63812 . - . ID=rna-D5F94_RS01840;Parent=gene-D5F94_RS01840;anticodon=(pos:complement(63776..63778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01840;product=tRNA-Ile NZ_QYTD01000002.1 tRNAscan-SE exon 63739 63812 . - . ID=exon-D5F94_RS01840-1;Parent=rna-D5F94_RS01840;anticodon=(pos:complement(63776..63778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01840;product=tRNA-Ile NZ_QYTD01000002.1 RefSeq gene 63847 63917 . - . ID=gene-D5F94_RS01845;Name=D5F94_RS01845;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01845;old_locus_tag=D5F94_01845 NZ_QYTD01000002.1 tRNAscan-SE tRNA 63847 63917 . - . ID=rna-D5F94_RS01845;Parent=gene-D5F94_RS01845;anticodon=(pos:complement(63883..63885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01845;product=tRNA-Gly NZ_QYTD01000002.1 tRNAscan-SE exon 63847 63917 . - . ID=exon-D5F94_RS01845-1;Parent=rna-D5F94_RS01845;anticodon=(pos:complement(63883..63885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01845;product=tRNA-Gly NZ_QYTD01000002.1 RefSeq gene 63937 64009 . - . ID=gene-D5F94_RS01850;Name=D5F94_RS01850;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01850;old_locus_tag=D5F94_01850 NZ_QYTD01000002.1 tRNAscan-SE tRNA 63937 64009 . - . ID=rna-D5F94_RS01850;Parent=gene-D5F94_RS01850;anticodon=(pos:complement(63974..63976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01850;product=tRNA-Phe NZ_QYTD01000002.1 tRNAscan-SE exon 63937 64009 . - . ID=exon-D5F94_RS01850-1;Parent=rna-D5F94_RS01850;anticodon=(pos:complement(63974..63976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01850;product=tRNA-Phe NZ_QYTD01000002.1 RefSeq gene 64012 64085 . - . ID=gene-D5F94_RS01855;Name=D5F94_RS01855;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01855;old_locus_tag=D5F94_01855 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64012 64085 . - . ID=rna-D5F94_RS01855;Parent=gene-D5F94_RS01855;anticodon=(pos:complement(64049..64051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01855;product=tRNA-Met NZ_QYTD01000002.1 tRNAscan-SE exon 64012 64085 . - . ID=exon-D5F94_RS01855-1;Parent=rna-D5F94_RS01855;anticodon=(pos:complement(64049..64051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01855;product=tRNA-Met NZ_QYTD01000002.1 RefSeq gene 64096 64185 . - . ID=gene-D5F94_RS01860;Name=D5F94_RS01860;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01860;old_locus_tag=D5F94_01860 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64096 64185 . - . ID=rna-D5F94_RS01860;Parent=gene-D5F94_RS01860;anticodon=(pos:complement(64147..64149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01860;product=tRNA-Ser NZ_QYTD01000002.1 tRNAscan-SE exon 64096 64185 . - . ID=exon-D5F94_RS01860-1;Parent=rna-D5F94_RS01860;anticodon=(pos:complement(64147..64149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01860;product=tRNA-Ser NZ_QYTD01000002.1 RefSeq gene 64199 64270 . - . ID=gene-D5F94_RS01865;Name=D5F94_RS01865;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01865;old_locus_tag=D5F94_01865 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64199 64270 . - . ID=rna-D5F94_RS01865;Parent=gene-D5F94_RS01865;anticodon=(pos:complement(64235..64237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01865;product=tRNA-Glu NZ_QYTD01000002.1 tRNAscan-SE exon 64199 64270 . - . ID=exon-D5F94_RS01865-1;Parent=rna-D5F94_RS01865;anticodon=(pos:complement(64235..64237));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01865;product=tRNA-Glu NZ_QYTD01000002.1 RefSeq gene 64281 64354 . - . ID=gene-D5F94_RS01870;Name=D5F94_RS01870;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01870;old_locus_tag=D5F94_01870 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64281 64354 . - . ID=rna-D5F94_RS01870;Parent=gene-D5F94_RS01870;anticodon=(pos:complement(64318..64320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01870;product=tRNA-Ile NZ_QYTD01000002.1 tRNAscan-SE exon 64281 64354 . - . ID=exon-D5F94_RS01870-1;Parent=rna-D5F94_RS01870;anticodon=(pos:complement(64318..64320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01870;product=tRNA-Ile NZ_QYTD01000002.1 RefSeq gene 64383 64455 . - . ID=gene-D5F94_RS01875;Name=D5F94_RS01875;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01875;old_locus_tag=D5F94_01875 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64383 64455 . - . ID=rna-D5F94_RS01875;Parent=gene-D5F94_RS01875;anticodon=(pos:complement(64420..64422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01875;product=tRNA-Thr NZ_QYTD01000002.1 tRNAscan-SE exon 64383 64455 . - . ID=exon-D5F94_RS01875-1;Parent=rna-D5F94_RS01875;anticodon=(pos:complement(64420..64422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01875;product=tRNA-Thr NZ_QYTD01000002.1 RefSeq gene 64466 64547 . - . ID=gene-D5F94_RS01880;Name=D5F94_RS01880;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01880;old_locus_tag=D5F94_01880 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64466 64547 . - . ID=rna-D5F94_RS01880;Parent=gene-D5F94_RS01880;anticodon=(pos:complement(64511..64513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01880;product=tRNA-Leu NZ_QYTD01000002.1 tRNAscan-SE exon 64466 64547 . - . ID=exon-D5F94_RS01880-1;Parent=rna-D5F94_RS01880;anticodon=(pos:complement(64511..64513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01880;product=tRNA-Leu NZ_QYTD01000002.1 RefSeq gene 64557 64629 . - . ID=gene-D5F94_RS01885;Name=D5F94_RS01885;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01885;old_locus_tag=D5F94_01885 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64557 64629 . - . ID=rna-D5F94_RS01885;Parent=gene-D5F94_RS01885;anticodon=(pos:complement(64594..64596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01885;product=tRNA-Lys NZ_QYTD01000002.1 tRNAscan-SE exon 64557 64629 . - . ID=exon-D5F94_RS01885-1;Parent=rna-D5F94_RS01885;anticodon=(pos:complement(64594..64596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01885;product=tRNA-Lys NZ_QYTD01000002.1 RefSeq gene 64632 64704 . - . ID=gene-D5F94_RS01890;Name=D5F94_RS01890;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01890;old_locus_tag=D5F94_01890 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64632 64704 . - . ID=rna-D5F94_RS01890;Parent=gene-D5F94_RS01890;anticodon=(pos:complement(64669..64671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01890;product=tRNA-Asp NZ_QYTD01000002.1 tRNAscan-SE exon 64632 64704 . - . ID=exon-D5F94_RS01890-1;Parent=rna-D5F94_RS01890;anticodon=(pos:complement(64669..64671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01890;product=tRNA-Asp NZ_QYTD01000002.1 RefSeq gene 64707 64779 . - . ID=gene-D5F94_RS01895;Name=D5F94_RS01895;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS01895;old_locus_tag=D5F94_01895 NZ_QYTD01000002.1 tRNAscan-SE tRNA 64707 64779 . - . ID=rna-D5F94_RS01895;Parent=gene-D5F94_RS01895;anticodon=(pos:complement(64744..64746));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01895;product=tRNA-Val NZ_QYTD01000002.1 tRNAscan-SE exon 64707 64779 . - . ID=exon-D5F94_RS01895-1;Parent=rna-D5F94_RS01895;anticodon=(pos:complement(64744..64746));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS01895;product=tRNA-Val NZ_QYTD01000002.1 RefSeq gene 64783 64898 . - . ID=gene-D5F94_RS01900;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F94_RS01900;old_locus_tag=D5F94_01900 NZ_QYTD01000002.1 cmsearch rRNA 64783 64898 . - . ID=rna-D5F94_RS01900;Parent=gene-D5F94_RS01900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS01900;product=5S ribosomal RNA NZ_QYTD01000002.1 cmsearch exon 64783 64898 . - . ID=exon-D5F94_RS01900-1;Parent=rna-D5F94_RS01900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS01900;product=5S ribosomal RNA ##sequence-region NZ_QYTD01000020.1 1 19020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000020.1 RefSeq region 1 19020 . + . ID=NZ_QYTD01000020.1:1..19020;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000020.1 RefSeq gene 1 147 . - . ID=gene-D5F94_RS09820;Name=D5F94_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09820;old_locus_tag=D5F94_09825;partial=true;start_range=.,1 NZ_QYTD01000020.1 Protein Homology CDS 1 147 . - 0 ID=cds-WP_142361120.1;Parent=gene-D5F94_RS09820;Dbxref=GenBank:WP_142361120.1;Name=WP_142361120.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611914.1;locus_tag=D5F94_RS09820;partial=true;product=transposase;protein_id=WP_142361120.1;start_range=.,1;transl_table=11 NZ_QYTD01000020.1 RefSeq pseudogene 228 518 . + . ID=gene-D5F94_RS09830;Name=D5F94_RS09830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09830;old_locus_tag=D5F94_09835;partial=true;pseudo=true;start_range=.,228 NZ_QYTD01000020.1 Protein Homology CDS 228 518 . + 0 ID=cds-D5F94_RS09830;Parent=gene-D5F94_RS09830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818561.1;locus_tag=D5F94_RS09830;partial=true;product=major tail protein;pseudo=true;start_range=.,228;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 530 949 . + . ID=gene-D5F94_RS09835;Name=D5F94_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09835;old_locus_tag=D5F94_09840 NZ_QYTD01000020.1 Protein Homology CDS 530 949 . + 0 ID=cds-WP_001249617.1;Parent=gene-D5F94_RS09835;Dbxref=GenBank:WP_001249617.1;Name=WP_001249617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047255.1;locus_tag=D5F94_RS09835;product=hypothetical protein;protein_id=WP_001249617.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 1244 4363 . + . ID=gene-D5F94_RS09840;Name=D5F94_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09840;old_locus_tag=D5F94_09845 NZ_QYTD01000020.1 Protein Homology CDS 1244 4363 . + 0 ID=cds-WP_124749625.1;Parent=gene-D5F94_RS09840;Dbxref=GenBank:WP_124749625.1;Name=WP_124749625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918338.1;locus_tag=D5F94_RS09840;product=phage tail tape measure protein;protein_id=WP_124749625.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 4360 5085 . + . ID=gene-D5F94_RS09845;Name=D5F94_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09845;old_locus_tag=D5F94_09850 NZ_QYTD01000020.1 Protein Homology CDS 4360 5085 . + 0 ID=cds-WP_124749627.1;Parent=gene-D5F94_RS09845;Dbxref=GenBank:WP_124749627.1;Name=WP_124749627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057816.1;locus_tag=D5F94_RS09845;product=phage tail protein;protein_id=WP_124749627.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 5085 8000 . + . ID=gene-D5F94_RS09850;Name=D5F94_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09850;old_locus_tag=D5F94_09855 NZ_QYTD01000020.1 Protein Homology CDS 5085 8000 . + 0 ID=cds-WP_124749629.1;Parent=gene-D5F94_RS09850;Dbxref=GenBank:WP_124749629.1;Name=WP_124749629.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650699.1;locus_tag=D5F94_RS09850;product=phage tail spike protein;protein_id=WP_124749629.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 8013 9869 . + . ID=gene-D5F94_RS09855;Name=D5F94_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09855;old_locus_tag=D5F94_09860 NZ_QYTD01000020.1 Protein Homology CDS 8013 9869 . + 0 ID=cds-WP_124749631.1;Parent=gene-D5F94_RS09855;Dbxref=GenBank:WP_124749631.1;Name=WP_124749631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796407.1;locus_tag=D5F94_RS09855;product=DUF859 family phage minor structural protein;protein_id=WP_124749631.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 9887 10285 . + . ID=gene-D5F94_RS09860;Name=D5F94_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09860;old_locus_tag=D5F94_09865 NZ_QYTD01000020.1 Protein Homology CDS 9887 10285 . + 0 ID=cds-WP_000661349.1;Parent=gene-D5F94_RS09860;Dbxref=GenBank:WP_000661349.1;Name=WP_000661349.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661350.1;locus_tag=D5F94_RS09860;product=phage holin family protein;protein_id=WP_000661349.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 10287 11693 . + . ID=gene-D5F94_RS09865;Name=D5F94_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09865;old_locus_tag=D5F94_09870 NZ_QYTD01000020.1 Protein Homology CDS 10287 11693 . + 0 ID=cds-WP_000143477.1;Parent=gene-D5F94_RS09865;Dbxref=GenBank:WP_000143477.1;Name=WP_000143477.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143477.1;locus_tag=D5F94_RS09865;product=glucosaminidase domain-containing protein;protein_id=WP_000143477.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 11829 11936 . + . ID=gene-D5F94_RS09870;Name=D5F94_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09870;old_locus_tag=D5F94_09875 NZ_QYTD01000020.1 Protein Homology CDS 11829 11936 . + 0 ID=cds-WP_000123549.1;Parent=gene-D5F94_RS09870;Dbxref=GenBank:WP_000123549.1;Name=WP_000123549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647171.1;locus_tag=D5F94_RS09870;product=putative holin-like toxin;protein_id=WP_000123549.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 12474 13715 . + . ID=gene-D5F94_RS09875;Name=D5F94_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09875;old_locus_tag=D5F94_09880 NZ_QYTD01000020.1 Protein Homology CDS 12474 13715 . + 0 ID=cds-WP_124749633.1;Parent=gene-D5F94_RS09875;Dbxref=GenBank:WP_124749633.1;Name=WP_124749633.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083348.1;locus_tag=D5F94_RS09875;product=recombinase family protein;protein_id=WP_124749633.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 13660 14964 . + . ID=gene-D5F94_RS09880;Name=D5F94_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09880;old_locus_tag=D5F94_09885 NZ_QYTD01000020.1 Protein Homology CDS 13660 14964 . + 0 ID=cds-WP_124749635.1;Parent=gene-D5F94_RS09880;Dbxref=GenBank:WP_124749635.1;Name=WP_124749635.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517628.1;locus_tag=D5F94_RS09880;product=recombinase family protein;protein_id=WP_124749635.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 15034 15807 . + . ID=gene-D5F94_RS09885;Name=D5F94_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09885;old_locus_tag=D5F94_09890 NZ_QYTD01000020.1 Protein Homology CDS 15034 15807 . + 0 ID=cds-WP_000504421.1;Parent=gene-D5F94_RS09885;Dbxref=GenBank:WP_000504421.1;Name=WP_000504421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000504422.1;locus_tag=D5F94_RS09885;product=hypothetical protein;protein_id=WP_000504421.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 15821 17326 . + . ID=gene-D5F94_RS09890;Name=D5F94_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09890;old_locus_tag=D5F94_09895 NZ_QYTD01000020.1 Protein Homology CDS 15821 17326 . + 0 ID=cds-WP_124749637.1;Parent=gene-D5F94_RS09890;Dbxref=GenBank:WP_124749637.1;Name=WP_124749637.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645566.1;locus_tag=D5F94_RS09890;product=serine/threonine-protein kinase;protein_id=WP_124749637.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 17720 17914 . + . ID=gene-D5F94_RS09895;Name=D5F94_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09895;old_locus_tag=D5F94_09900 NZ_QYTD01000020.1 Protein Homology CDS 17720 17914 . + 0 ID=cds-WP_041165661.1;Parent=gene-D5F94_RS09895;Dbxref=GenBank:WP_041165661.1;Name=WP_041165661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268770.1;locus_tag=D5F94_RS09895;product=hypothetical protein;protein_id=WP_041165661.1;transl_table=11 NZ_QYTD01000020.1 RefSeq gene 17901 18668 . + . ID=gene-D5F94_RS09900;Name=D5F94_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09900;old_locus_tag=D5F94_09905 NZ_QYTD01000020.1 Protein Homology CDS 17901 18668 . + 0 ID=cds-WP_016502649.1;Parent=gene-D5F94_RS09900;Dbxref=GenBank:WP_016502649.1;Name=WP_016502649.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502649.1;locus_tag=D5F94_RS09900;product=DNA cytosine methyltransferase;protein_id=WP_016502649.1;transl_table=11 NZ_QYTD01000020.1 RefSeq pseudogene 18682 19020 . - . ID=gene-D5F94_RS09905;Name=D5F94_RS09905;end_range=19020,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09905;old_locus_tag=D5F94_09910;partial=true;pseudo=true NZ_QYTD01000020.1 Protein Homology CDS 18682 19020 . - 2 ID=cds-D5F94_RS09905;Parent=gene-D5F94_RS09905;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;end_range=19020,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS09905;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000021.1 1 20481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000021.1 RefSeq region 1 20481 . + . ID=NZ_QYTD01000021.1:1..20481;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000021.1 RefSeq gene 1 214 . + . ID=gene-D5F94_RS09910;Name=D5F94_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09910;old_locus_tag=D5F94_09915;partial=true;start_range=.,1 NZ_QYTD01000021.1 Protein Homology CDS 1 214 . + 1 ID=cds-WP_142997333.1;Parent=gene-D5F94_RS09910;Dbxref=GenBank:WP_142997333.1;Name=WP_142997333.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS09910;partial=true;product=integrase core domain-containing protein;protein_id=WP_142997333.1;start_range=.,1;transl_table=11 NZ_QYTD01000021.1 RefSeq pseudogene 259 642 . - . ID=gene-D5F94_RS09915;Name=D5F94_RS09915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09915;old_locus_tag=D5F94_09920;partial=true;pseudo=true;start_range=.,259 NZ_QYTD01000021.1 Protein Homology CDS 259 642 . - 0 ID=cds-D5F94_RS09915;Parent=gene-D5F94_RS09915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160532.1;locus_tag=D5F94_RS09915;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,259;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 902 1327 . + . ID=gene-D5F94_RS09920;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=D5F94_RS09920;old_locus_tag=D5F94_09925 NZ_QYTD01000021.1 Protein Homology CDS 902 1327 . + 0 ID=cds-WP_001085802.1;Parent=gene-D5F94_RS09920;Dbxref=GenBank:WP_001085802.1;Name=WP_001085802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226069.1;locus_tag=D5F94_RS09920;product=50S ribosomal protein L11;protein_id=WP_001085802.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 1431 2120 . + . ID=gene-D5F94_RS09925;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=D5F94_RS09925;old_locus_tag=D5F94_09930 NZ_QYTD01000021.1 Protein Homology CDS 1431 2120 . + 0 ID=cds-WP_001085664.1;Parent=gene-D5F94_RS09925;Dbxref=GenBank:WP_001085664.1;Name=WP_001085664.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=D5F94_RS09925;product=50S ribosomal protein L1;protein_id=WP_001085664.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 2510 4126 . + . ID=gene-D5F94_RS09930;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=D5F94_RS09930;old_locus_tag=D5F94_09935 NZ_QYTD01000021.1 Protein Homology CDS 2510 4126 . + 0 ID=cds-WP_086163430.1;Parent=gene-D5F94_RS09930;Dbxref=GenBank:WP_086163430.1;Name=WP_086163430.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253836.1;locus_tag=D5F94_RS09930;product=nickel ABC transporter substrate-binding protein;protein_id=WP_086163430.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 4113 5057 . + . ID=gene-D5F94_RS09935;Name=D5F94_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09935;old_locus_tag=D5F94_09940 NZ_QYTD01000021.1 Protein Homology CDS 4113 5057 . + 0 ID=cds-WP_000281515.1;Parent=gene-D5F94_RS09935;Dbxref=GenBank:WP_000281515.1;Name=WP_000281515.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281517.1;locus_tag=D5F94_RS09935;product=ABC transporter permease;protein_id=WP_000281515.1;transl_table=11 NZ_QYTD01000021.1 RefSeq pseudogene 5057 5864 . + . ID=gene-D5F94_RS09940;Name=D5F94_RS09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS09940;old_locus_tag=D5F94_09945;pseudo=true NZ_QYTD01000021.1 Protein Homology CDS 5057 5864 . + 0 ID=cds-D5F94_RS09940;Parent=gene-D5F94_RS09940;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647895.1;locus_tag=D5F94_RS09940;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 5852 6640 . + . ID=gene-D5F94_RS09945;Name=D5F94_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09945;old_locus_tag=D5F94_09950 NZ_QYTD01000021.1 Protein Homology CDS 5852 6640 . + 0 ID=cds-WP_016481063.1;Parent=gene-D5F94_RS09945;Dbxref=GenBank:WP_016481063.1;Name=WP_016481063.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436158.1;locus_tag=D5F94_RS09945;product=ATP-binding cassette domain-containing protein;protein_id=WP_016481063.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 6627 7307 . + . ID=gene-D5F94_RS09950;Name=D5F94_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09950;old_locus_tag=D5F94_09955 NZ_QYTD01000021.1 Protein Homology CDS 6627 7307 . + 0 ID=cds-WP_016481062.1;Parent=gene-D5F94_RS09950;Dbxref=GenBank:WP_016481062.1;Name=WP_016481062.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959471.1;locus_tag=D5F94_RS09950;product=ABC transporter ATP-binding protein;protein_id=WP_016481062.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 7428 8156 . + . ID=gene-D5F94_RS09955;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=D5F94_RS09955;old_locus_tag=D5F94_09960 NZ_QYTD01000021.1 Protein Homology CDS 7428 8156 . + 0 ID=cds-WP_000433491.1;Parent=gene-D5F94_RS09955;Dbxref=GenBank:WP_000433491.1;Name=WP_000433491.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985765.1;locus_tag=D5F94_RS09955;product=UMP kinase;protein_id=WP_000433491.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 8172 8729 . + . ID=gene-D5F94_RS09960;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=D5F94_RS09960;old_locus_tag=D5F94_09965 NZ_QYTD01000021.1 Protein Homology CDS 8172 8729 . + 0 ID=cds-WP_000159519.1;Parent=gene-D5F94_RS09960;Dbxref=GenBank:WP_000159519.1;Name=WP_000159519.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=D5F94_RS09960;product=ribosome recycling factor;protein_id=WP_000159519.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 8847 9701 . + . ID=gene-D5F94_RS09965;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=D5F94_RS09965;old_locus_tag=D5F94_09970 NZ_QYTD01000021.1 Protein Homology CDS 8847 9701 . + 0 ID=cds-WP_016481060.1;Parent=gene-D5F94_RS09965;Dbxref=GenBank:WP_016481060.1;Name=WP_016481060.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095444.1;locus_tag=D5F94_RS09965;product=RNA-binding virulence regulatory protein CvfB;protein_id=WP_016481060.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 9839 10348 . + . ID=gene-D5F94_RS09970;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=D5F94_RS09970;old_locus_tag=D5F94_09975 NZ_QYTD01000021.1 Protein Homology CDS 9839 10348 . + 0 ID=cds-WP_016481059.1;Parent=gene-D5F94_RS09970;Dbxref=GenBank:WP_016481059.1;Name=WP_016481059.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481059.1;locus_tag=D5F94_RS09970;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_016481059.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 10345 10560 . + . ID=gene-D5F94_RS09975;Name=D5F94_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09975;old_locus_tag=D5F94_09980 NZ_QYTD01000021.1 Protein Homology CDS 10345 10560 . + 0 ID=cds-WP_001232073.1;Parent=gene-D5F94_RS09975;Dbxref=GenBank:WP_001232073.1;Name=WP_001232073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232073.1;locus_tag=D5F94_RS09975;product=YozE family protein;protein_id=WP_001232073.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 10712 12484 . + . ID=gene-D5F94_RS09980;Name=D5F94_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09980;old_locus_tag=D5F94_09985 NZ_QYTD01000021.1 Protein Homology CDS 10712 12484 . + 0 ID=cds-WP_001270883.1;Parent=gene-D5F94_RS09980;Dbxref=GenBank:WP_001270883.1;Name=WP_001270883.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646510.1;locus_tag=D5F94_RS09980;product=oleate hydratase;protein_id=WP_001270883.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 12608 13594 . + . ID=gene-D5F94_RS09985;Name=D5F94_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09985;old_locus_tag=D5F94_09990 NZ_QYTD01000021.1 Protein Homology CDS 12608 13594 . + 0 ID=cds-WP_001158917.1;Parent=gene-D5F94_RS09985;Dbxref=GenBank:WP_001158917.1;Name=WP_001158917.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158936.1;locus_tag=D5F94_RS09985;product=PhoH family protein;protein_id=WP_001158917.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 13686 14489 . - . ID=gene-D5F94_RS09990;Name=D5F94_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09990;old_locus_tag=D5F94_09995 NZ_QYTD01000021.1 Protein Homology CDS 13686 14489 . - 0 ID=cds-WP_016503074.1;Parent=gene-D5F94_RS09990;Dbxref=GenBank:WP_016503074.1;Name=WP_016503074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349554.1;locus_tag=D5F94_RS09990;product=DUF4037 domain-containing protein;protein_id=WP_016503074.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 14681 15157 . + . ID=gene-D5F94_RS09995;Name=D5F94_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS09995;old_locus_tag=D5F94_10000 NZ_QYTD01000021.1 Protein Homology CDS 14681 15157 . + 0 ID=cds-WP_000806806.1;Parent=gene-D5F94_RS09995;Dbxref=GenBank:WP_000806806.1;Name=WP_000806806.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649862.1;locus_tag=D5F94_RS09995;product=NUDIX hydrolase;protein_id=WP_000806806.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 15479 16285 . + . ID=gene-D5F94_RS10010;Name=D5F94_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10010;old_locus_tag=D5F94_10015 NZ_QYTD01000021.1 Protein Homology CDS 15479 16285 . + 0 ID=cds-WP_016481054.1;Parent=gene-D5F94_RS10010;Dbxref=GenBank:WP_016481054.1;Name=WP_016481054.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705139.1;locus_tag=D5F94_RS10010;product=class I SAM-dependent methyltransferase;protein_id=WP_016481054.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 16680 17177 . + . ID=gene-D5F94_RS10015;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D5F94_RS10015;old_locus_tag=D5F94_10020 NZ_QYTD01000021.1 Protein Homology CDS 16680 17177 . + 0 ID=cds-WP_001868390.1;Parent=gene-D5F94_RS10015;Dbxref=GenBank:WP_001868390.1;Name=WP_001868390.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=D5F94_RS10015;product=rRNA maturation RNase YbeY;protein_id=WP_001868390.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 17158 17556 . + . ID=gene-D5F94_RS10020;Name=dagK;gbkey=Gene;gene=dagK;gene_biotype=protein_coding;locus_tag=D5F94_RS10020;old_locus_tag=D5F94_10025 NZ_QYTD01000021.1 Protein Homology CDS 17158 17556 . + 0 ID=cds-WP_000365220.1;Parent=gene-D5F94_RS10020;Dbxref=GenBank:WP_000365220.1;Name=WP_000365220.1;gbkey=CDS;gene=dagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365222.1;locus_tag=D5F94_RS10020;product=diacylglycerol kinase;protein_id=WP_000365220.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 17598 18497 . + . ID=gene-D5F94_RS10025;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=D5F94_RS10025;old_locus_tag=D5F94_10030 NZ_QYTD01000021.1 Protein Homology CDS 17598 18497 . + 0 ID=cds-WP_000143289.1;Parent=gene-D5F94_RS10025;Dbxref=GenBank:WP_000143289.1;Name=WP_000143289.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012658024.1;locus_tag=D5F94_RS10025;product=GTPase Era;protein_id=WP_000143289.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 18734 19123 . + . ID=gene-D5F94_RS10030;Name=D5F94_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10030;old_locus_tag=D5F94_10035 NZ_QYTD01000021.1 Protein Homology CDS 18734 19123 . + 0 ID=cds-WP_124749639.1;Parent=gene-D5F94_RS10030;Dbxref=GenBank:WP_124749639.1;Name=WP_124749639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771275.1;locus_tag=D5F94_RS10030;product=hypothetical protein;protein_id=WP_124749639.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 19583 19834 . + . ID=gene-D5F94_RS10035;Name=D5F94_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10035;old_locus_tag=D5F94_10040 NZ_QYTD01000021.1 Protein Homology CDS 19583 19834 . + 0 ID=cds-WP_180383435.1;Parent=gene-D5F94_RS10035;Dbxref=GenBank:WP_180383435.1;Name=WP_180383435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000973012.1;locus_tag=D5F94_RS10035;product=hypothetical protein;protein_id=WP_180383435.1;transl_table=11 NZ_QYTD01000021.1 RefSeq gene 19862 20107 . + . ID=gene-D5F94_RS10040;Name=D5F94_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10040;old_locus_tag=D5F94_10045 NZ_QYTD01000021.1 Protein Homology CDS 19862 20107 . + 0 ID=cds-WP_228761751.1;Parent=gene-D5F94_RS10040;Dbxref=GenBank:WP_228761751.1;Name=WP_228761751.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=D5F94_RS10040;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_228761751.1;transl_table=11 NZ_QYTD01000021.1 RefSeq pseudogene 20342 20481 . + . ID=gene-D5F94_RS10045;Name=D5F94_RS10045;end_range=20481,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10045;old_locus_tag=D5F94_10050;partial=true;pseudo=true NZ_QYTD01000021.1 Protein Homology CDS 20342 20481 . + 0 ID=cds-D5F94_RS10045;Parent=gene-D5F94_RS10045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=20481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F94_RS10045;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000022.1 1 5323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000022.1 RefSeq region 1 5323 . + . ID=NZ_QYTD01000022.1:1..5323;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000022.1 RefSeq pseudogene 1 131 . - . ID=gene-D5F94_RS10050;Name=D5F94_RS10050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10050;old_locus_tag=D5F94_10055;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000022.1 Protein Homology CDS 1 131 . - 0 ID=cds-D5F94_RS10050;Parent=gene-D5F94_RS10050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS10050;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000022.1 RefSeq gene 407 1186 . - . ID=gene-D5F94_RS10055;Name=D5F94_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10055;old_locus_tag=D5F94_10060 NZ_QYTD01000022.1 Protein Homology CDS 407 1186 . - 0 ID=cds-WP_000934859.1;Parent=gene-D5F94_RS10055;Dbxref=GenBank:WP_000934859.1;Name=WP_000934859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934864.1;locus_tag=D5F94_RS10055;product=hypothetical protein;protein_id=WP_000934859.1;transl_table=11 NZ_QYTD01000022.1 RefSeq gene 2198 4621 . + . ID=gene-D5F94_RS10065;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=D5F94_RS10065;old_locus_tag=D5F94_10070 NZ_QYTD01000022.1 Protein Homology CDS 2198 4621 . + 0 ID=cds-WP_124749641.1;Parent=gene-D5F94_RS10065;Dbxref=GenBank:WP_124749641.1;Name=WP_124749641.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988347.1;locus_tag=D5F94_RS10065;product=CRISPR-associated helicase Cas3';protein_id=WP_124749641.1;transl_table=11 NZ_QYTD01000022.1 RefSeq pseudogene 4754 5128 . + . ID=gene-D5F94_RS10070;Name=cas5c;end_range=5128,.;gbkey=Gene;gene=cas5c;gene_biotype=pseudogene;locus_tag=D5F94_RS10070;old_locus_tag=D5F94_10075;partial=true;pseudo=true NZ_QYTD01000022.1 Protein Homology CDS 4754 5128 . + 0 ID=cds-D5F94_RS10070;Parent=gene-D5F94_RS10070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043571,GO:0051607,GO:0004519;end_range=5128,.;gbkey=CDS;gene=cas5c;go_function=endonuclease activity|0004519||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011528831.1;locus_tag=D5F94_RS10070;partial=true;product=type I-C CRISPR-associated protein Cas5c;pseudo=true;transl_table=11 NZ_QYTD01000022.1 RefSeq pseudogene 5164 5323 . - . ID=gene-D5F94_RS10075;Name=D5F94_RS10075;end_range=5323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10075;old_locus_tag=D5F94_10080;partial=true;pseudo=true NZ_QYTD01000022.1 Protein Homology CDS 5164 5323 . - 0 ID=cds-D5F94_RS10075;Parent=gene-D5F94_RS10075;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10075;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000023.1 1 11120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000023.1 RefSeq region 1 11120 . + . ID=NZ_QYTD01000023.1:1..11120;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000023.1 RefSeq gene 1 168 . - . ID=gene-D5F94_RS10080;Name=D5F94_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10080;old_locus_tag=D5F94_10085;partial=true;start_range=.,1 NZ_QYTD01000023.1 Protein Homology CDS 1 168 . - 0 ID=cds-WP_142997334.1;Parent=gene-D5F94_RS10080;Dbxref=GenBank:WP_142997334.1;Name=WP_142997334.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS10080;partial=true;product=transposase;protein_id=WP_142997334.1;start_range=.,1;transl_table=11 NZ_QYTD01000023.1 RefSeq pseudogene 235 384 . + . ID=gene-D5F94_RS10085;Name=D5F94_RS10085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10085;old_locus_tag=D5F94_10090;partial=true;pseudo=true;start_range=.,235 NZ_QYTD01000023.1 Protein Homology CDS 235 384 . + 0 ID=cds-D5F94_RS10085;Parent=gene-D5F94_RS10085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643107.1;locus_tag=D5F94_RS10085;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,235;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 387 1484 . + . ID=gene-D5F94_RS10090;Name=D5F94_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10090;old_locus_tag=D5F94_10095 NZ_QYTD01000023.1 Protein Homology CDS 387 1484 . + 0 ID=cds-WP_016480275.1;Parent=gene-D5F94_RS10090;Dbxref=GenBank:WP_016480275.1;Name=WP_016480275.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767061.1;locus_tag=D5F94_RS10090;product=ABC transporter permease;protein_id=WP_016480275.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 1508 2116 . + . ID=gene-D5F94_RS10095;Name=D5F94_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10095;old_locus_tag=D5F94_10100 NZ_QYTD01000023.1 Protein Homology CDS 1508 2116 . + 0 ID=cds-WP_016480274.1;Parent=gene-D5F94_RS10095;Dbxref=GenBank:WP_016480274.1;Name=WP_016480274.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794358.1;locus_tag=D5F94_RS10095;product=TetR/AcrR family transcriptional regulator;protein_id=WP_016480274.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 2696 3187 . + . ID=gene-D5F94_RS10105;Name=D5F94_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10105;old_locus_tag=D5F94_10110 NZ_QYTD01000023.1 Protein Homology CDS 2696 3187 . + 0 ID=cds-WP_000025251.1;Parent=gene-D5F94_RS10105;Dbxref=GenBank:WP_000025251.1;Name=WP_000025251.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025252.1;locus_tag=D5F94_RS10105;product=RNA polymerase sigma factor;protein_id=WP_000025251.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 3184 4131 . + . ID=gene-D5F94_RS10110;Name=D5F94_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10110;old_locus_tag=D5F94_10115 NZ_QYTD01000023.1 Protein Homology CDS 3184 4131 . + 0 ID=cds-WP_124749643.1;Parent=gene-D5F94_RS10110;Dbxref=GenBank:WP_124749643.1;Name=WP_124749643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502471.1;locus_tag=D5F94_RS10110;product=sigma factor regulator N-terminal domain-containing protein;protein_id=WP_124749643.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 4391 5071 . - . ID=gene-D5F94_RS10115;Name=D5F94_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10115;old_locus_tag=D5F94_10120 NZ_QYTD01000023.1 Protein Homology CDS 4391 5071 . - 0 ID=cds-WP_025194843.1;Parent=gene-D5F94_RS10115;Dbxref=GenBank:WP_025194843.1;Name=WP_025194843.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503134.1;locus_tag=D5F94_RS10115;product=GNAT family N-acetyltransferase;protein_id=WP_025194843.1;transl_table=11 NZ_QYTD01000023.1 RefSeq pseudogene 5146 5698 . - . ID=gene-D5F94_RS10120;Name=D5F94_RS10120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10120;old_locus_tag=D5F94_10125;pseudo=true NZ_QYTD01000023.1 Protein Homology CDS 5146 5698 . - 0 ID=cds-D5F94_RS10120;Parent=gene-D5F94_RS10120;Note=frameshifted%3B internal stop;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649299.1;locus_tag=D5F94_RS10120;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 5798 6358 . - . ID=gene-D5F94_RS10125;Name=D5F94_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10125;old_locus_tag=D5F94_10130 NZ_QYTD01000023.1 Protein Homology CDS 5798 6358 . - 0 ID=cds-WP_124749645.1;Parent=gene-D5F94_RS10125;Dbxref=GenBank:WP_124749645.1;Name=WP_124749645.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771544.1;locus_tag=D5F94_RS10125;product=GNAT family N-acetyltransferase;protein_id=WP_124749645.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 6806 7156 . - . ID=gene-D5F94_RS10130;Name=D5F94_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10130;old_locus_tag=D5F94_10135 NZ_QYTD01000023.1 Protein Homology CDS 6806 7156 . - 0 ID=cds-WP_016480270.1;Parent=gene-D5F94_RS10130;Dbxref=GenBank:WP_016480270.1;Name=WP_016480270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480270.1;locus_tag=D5F94_RS10130;product=hypothetical protein;protein_id=WP_016480270.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 7166 7438 . - . ID=gene-D5F94_RS10135;Name=D5F94_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10135;old_locus_tag=D5F94_10140 NZ_QYTD01000023.1 Protein Homology CDS 7166 7438 . - 0 ID=cds-WP_016480269.1;Parent=gene-D5F94_RS10135;Dbxref=GenBank:WP_016480269.1;Name=WP_016480269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032104.1;locus_tag=D5F94_RS10135;product=hypothetical protein;protein_id=WP_016480269.1;transl_table=11 NZ_QYTD01000023.1 RefSeq pseudogene 7457 8775 . - . ID=gene-D5F94_RS10565;Name=D5F94_RS10565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10565;pseudo=true NZ_QYTD01000023.1 Protein Homology CDS 7457 8775 . - 0 ID=cds-D5F94_RS10565;Parent=gene-D5F94_RS10565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073524.1;locus_tag=D5F94_RS10565;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 8839 9297 . - . ID=gene-D5F94_RS10150;Name=D5F94_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10150;old_locus_tag=D5F94_10155 NZ_QYTD01000023.1 Protein Homology CDS 8839 9297 . - 0 ID=cds-WP_001233829.1;Parent=gene-D5F94_RS10150;Dbxref=GenBank:WP_001233829.1;Name=WP_001233829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647095.1;locus_tag=D5F94_RS10150;product=hypothetical protein;protein_id=WP_001233829.1;transl_table=11 NZ_QYTD01000023.1 RefSeq gene 9606 9689 . - . ID=gene-D5F94_RS10155;Name=D5F94_RS10155;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10155;old_locus_tag=D5F94_10160 NZ_QYTD01000023.1 tRNAscan-SE tRNA 9606 9689 . - . ID=rna-D5F94_RS10155;Parent=gene-D5F94_RS10155;anticodon=(pos:complement(9653..9655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10155;product=tRNA-Leu NZ_QYTD01000023.1 tRNAscan-SE exon 9606 9689 . - . ID=exon-D5F94_RS10155-1;Parent=rna-D5F94_RS10155;anticodon=(pos:complement(9653..9655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10155;product=tRNA-Leu NZ_QYTD01000023.1 RefSeq gene 9700 9771 . - . ID=gene-D5F94_RS10160;Name=D5F94_RS10160;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10160;old_locus_tag=D5F94_10165 NZ_QYTD01000023.1 tRNAscan-SE tRNA 9700 9771 . - . ID=rna-D5F94_RS10160;Parent=gene-D5F94_RS10160;anticodon=(pos:complement(9737..9739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10160;product=tRNA-Gln NZ_QYTD01000023.1 tRNAscan-SE exon 9700 9771 . - . ID=exon-D5F94_RS10160-1;Parent=rna-D5F94_RS10160;anticodon=(pos:complement(9737..9739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10160;product=tRNA-Gln NZ_QYTD01000023.1 RefSeq gene 9778 9850 . - . ID=gene-D5F94_RS10165;Name=D5F94_RS10165;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10165;old_locus_tag=D5F94_10170 NZ_QYTD01000023.1 tRNAscan-SE tRNA 9778 9850 . - . ID=rna-D5F94_RS10165;Parent=gene-D5F94_RS10165;anticodon=(pos:complement(9815..9817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10165;product=tRNA-His NZ_QYTD01000023.1 tRNAscan-SE exon 9778 9850 . - . ID=exon-D5F94_RS10165-1;Parent=rna-D5F94_RS10165;anticodon=(pos:complement(9815..9817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10165;product=tRNA-His NZ_QYTD01000023.1 RefSeq gene 9865 9935 . - . ID=gene-D5F94_RS10170;Name=D5F94_RS10170;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10170;old_locus_tag=D5F94_10175 NZ_QYTD01000023.1 tRNAscan-SE tRNA 9865 9935 . - . ID=rna-D5F94_RS10170;Parent=gene-D5F94_RS10170;anticodon=(pos:complement(9901..9903));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10170;product=tRNA-Trp NZ_QYTD01000023.1 tRNAscan-SE exon 9865 9935 . - . ID=exon-D5F94_RS10170-1;Parent=rna-D5F94_RS10170;anticodon=(pos:complement(9901..9903));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10170;product=tRNA-Trp NZ_QYTD01000023.1 RefSeq gene 9942 10022 . - . ID=gene-D5F94_RS10175;Name=D5F94_RS10175;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10175;old_locus_tag=D5F94_10180 NZ_QYTD01000023.1 tRNAscan-SE tRNA 9942 10022 . - . ID=rna-D5F94_RS10175;Parent=gene-D5F94_RS10175;anticodon=(pos:complement(9986..9988));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10175;product=tRNA-Tyr NZ_QYTD01000023.1 tRNAscan-SE exon 9942 10022 . - . ID=exon-D5F94_RS10175-1;Parent=rna-D5F94_RS10175;anticodon=(pos:complement(9986..9988));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10175;product=tRNA-Tyr NZ_QYTD01000023.1 RefSeq gene 10034 10106 . - . ID=gene-D5F94_RS10180;Name=D5F94_RS10180;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10180;old_locus_tag=D5F94_10185 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10034 10106 . - . ID=rna-D5F94_RS10180;Parent=gene-D5F94_RS10180;anticodon=(pos:complement(10071..10073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10180;product=tRNA-Phe NZ_QYTD01000023.1 tRNAscan-SE exon 10034 10106 . - . ID=exon-D5F94_RS10180-1;Parent=rna-D5F94_RS10180;anticodon=(pos:complement(10071..10073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10180;product=tRNA-Phe NZ_QYTD01000023.1 RefSeq gene 10109 10182 . - . ID=gene-D5F94_RS10185;Name=D5F94_RS10185;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10185;old_locus_tag=D5F94_10190 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10109 10182 . - . ID=rna-D5F94_RS10185;Parent=gene-D5F94_RS10185;anticodon=(pos:complement(10146..10148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10185;product=tRNA-Met NZ_QYTD01000023.1 tRNAscan-SE exon 10109 10182 . - . ID=exon-D5F94_RS10185-1;Parent=rna-D5F94_RS10185;anticodon=(pos:complement(10146..10148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10185;product=tRNA-Met NZ_QYTD01000023.1 RefSeq gene 10193 10282 . - . ID=gene-D5F94_RS10190;Name=D5F94_RS10190;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10190;old_locus_tag=D5F94_10195 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10193 10282 . - . ID=rna-D5F94_RS10190;Parent=gene-D5F94_RS10190;anticodon=(pos:complement(10244..10246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10190;product=tRNA-Ser NZ_QYTD01000023.1 tRNAscan-SE exon 10193 10282 . - . ID=exon-D5F94_RS10190-1;Parent=rna-D5F94_RS10190;anticodon=(pos:complement(10244..10246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10190;product=tRNA-Ser NZ_QYTD01000023.1 RefSeq gene 10298 10371 . - . ID=gene-D5F94_RS10195;Name=D5F94_RS10195;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10195;old_locus_tag=D5F94_10200 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10298 10371 . - . ID=rna-D5F94_RS10195;Parent=gene-D5F94_RS10195;anticodon=(pos:complement(10335..10337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10195;product=tRNA-Ile NZ_QYTD01000023.1 tRNAscan-SE exon 10298 10371 . - . ID=exon-D5F94_RS10195-1;Parent=rna-D5F94_RS10195;anticodon=(pos:complement(10335..10337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10195;product=tRNA-Ile NZ_QYTD01000023.1 RefSeq gene 10391 10464 . - . ID=gene-D5F94_RS10200;Name=D5F94_RS10200;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10200;old_locus_tag=D5F94_10205 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10391 10464 . - . ID=rna-D5F94_RS10200;Parent=gene-D5F94_RS10200;anticodon=(pos:complement(10428..10430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10200;product=tRNA-Met NZ_QYTD01000023.1 tRNAscan-SE exon 10391 10464 . - . ID=exon-D5F94_RS10200-1;Parent=rna-D5F94_RS10200;anticodon=(pos:complement(10428..10430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10200;product=tRNA-Met NZ_QYTD01000023.1 RefSeq gene 10480 10553 . - . ID=gene-D5F94_RS10205;Name=D5F94_RS10205;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10205;old_locus_tag=D5F94_10210 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10480 10553 . - . ID=rna-D5F94_RS10205;Parent=gene-D5F94_RS10205;anticodon=(pos:complement(10517..10519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10205;product=tRNA-Pro NZ_QYTD01000023.1 tRNAscan-SE exon 10480 10553 . - . ID=exon-D5F94_RS10205-1;Parent=rna-D5F94_RS10205;anticodon=(pos:complement(10517..10519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10205;product=tRNA-Pro NZ_QYTD01000023.1 RefSeq gene 10561 10634 . - . ID=gene-D5F94_RS10210;Name=D5F94_RS10210;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10210;old_locus_tag=D5F94_10215 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10561 10634 . - . ID=rna-D5F94_RS10210;Parent=gene-D5F94_RS10210;anticodon=(pos:complement(10598..10600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10210;product=tRNA-Arg NZ_QYTD01000023.1 tRNAscan-SE exon 10561 10634 . - . ID=exon-D5F94_RS10210-1;Parent=rna-D5F94_RS10210;anticodon=(pos:complement(10598..10600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10210;product=tRNA-Arg NZ_QYTD01000023.1 RefSeq gene 10646 10730 . - . ID=gene-D5F94_RS10215;Name=D5F94_RS10215;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10215;old_locus_tag=D5F94_10220 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10646 10730 . - . ID=rna-D5F94_RS10215;Parent=gene-D5F94_RS10215;anticodon=(pos:complement(10694..10696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10215;product=tRNA-Leu NZ_QYTD01000023.1 tRNAscan-SE exon 10646 10730 . - . ID=exon-D5F94_RS10215-1;Parent=rna-D5F94_RS10215;anticodon=(pos:complement(10694..10696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10215;product=tRNA-Leu NZ_QYTD01000023.1 RefSeq gene 10739 10810 . - . ID=gene-D5F94_RS10220;Name=D5F94_RS10220;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10220;old_locus_tag=D5F94_10225 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10739 10810 . - . ID=rna-D5F94_RS10220;Parent=gene-D5F94_RS10220;anticodon=(pos:complement(10776..10778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10220;product=tRNA-Gly NZ_QYTD01000023.1 tRNAscan-SE exon 10739 10810 . - . ID=exon-D5F94_RS10220-1;Parent=rna-D5F94_RS10220;anticodon=(pos:complement(10776..10778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10220;product=tRNA-Gly NZ_QYTD01000023.1 RefSeq gene 10844 10916 . - . ID=gene-D5F94_RS10225;Name=D5F94_RS10225;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10225;old_locus_tag=D5F94_10230 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10844 10916 . - . ID=rna-D5F94_RS10225;Parent=gene-D5F94_RS10225;anticodon=(pos:complement(10881..10883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10225;product=tRNA-Thr NZ_QYTD01000023.1 tRNAscan-SE exon 10844 10916 . - . ID=exon-D5F94_RS10225-1;Parent=rna-D5F94_RS10225;anticodon=(pos:complement(10881..10883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10225;product=tRNA-Thr NZ_QYTD01000023.1 RefSeq gene 10927 11008 . - . ID=gene-D5F94_RS10230;Name=D5F94_RS10230;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10230;old_locus_tag=D5F94_10235 NZ_QYTD01000023.1 tRNAscan-SE tRNA 10927 11008 . - . ID=rna-D5F94_RS10230;Parent=gene-D5F94_RS10230;anticodon=(pos:complement(10972..10974));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10230;product=tRNA-Leu NZ_QYTD01000023.1 tRNAscan-SE exon 10927 11008 . - . ID=exon-D5F94_RS10230-1;Parent=rna-D5F94_RS10230;anticodon=(pos:complement(10972..10974));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10230;product=tRNA-Leu NZ_QYTD01000023.1 RefSeq gene 11018 11090 . - . ID=gene-D5F94_RS10235;Name=D5F94_RS10235;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10235;old_locus_tag=D5F94_10240 NZ_QYTD01000023.1 tRNAscan-SE tRNA 11018 11090 . - . ID=rna-D5F94_RS10235;Parent=gene-D5F94_RS10235;anticodon=(pos:complement(11055..11057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10235;product=tRNA-Lys NZ_QYTD01000023.1 tRNAscan-SE exon 11018 11090 . - . ID=exon-D5F94_RS10235-1;Parent=rna-D5F94_RS10235;anticodon=(pos:complement(11055..11057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10235;product=tRNA-Lys ##sequence-region NZ_QYTD01000024.1 1 4360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000024.1 RefSeq region 1 4360 . + . ID=NZ_QYTD01000024.1:1..4360;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000024.1 RefSeq gene 31 930 . - . ID=gene-D5F94_RS10240;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=D5F94_RS10240;old_locus_tag=D5F94_10245 NZ_QYTD01000024.1 Protein Homology CDS 31 930 . - 0 ID=cds-WP_000868271.1;Parent=gene-D5F94_RS10240;Dbxref=GenBank:WP_000868271.1;Name=WP_000868271.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868270.1;locus_tag=D5F94_RS10240;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000868271.1;transl_table=11 NZ_QYTD01000024.1 RefSeq gene 967 1983 . - . ID=gene-D5F94_RS10245;Name=D5F94_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10245;old_locus_tag=D5F94_10250 NZ_QYTD01000024.1 Protein Homology CDS 967 1983 . - 0 ID=cds-WP_000166107.1;Parent=gene-D5F94_RS10245;Dbxref=GenBank:WP_000166107.1;Name=WP_000166107.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166102.1;locus_tag=D5F94_RS10245;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_000166107.1;transl_table=11 NZ_QYTD01000024.1 RefSeq gene 2153 2482 . + . ID=gene-D5F94_RS10250;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=D5F94_RS10250;old_locus_tag=D5F94_10255 NZ_QYTD01000024.1 Protein Homology CDS 2153 2482 . + 0 ID=cds-WP_000754611.1;Parent=gene-D5F94_RS10250;Dbxref=GenBank:WP_000754611.1;Name=WP_000754611.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754613.1;locus_tag=D5F94_RS10250;product=ribonuclease P protein component;protein_id=WP_000754611.1;transl_table=11 NZ_QYTD01000024.1 RefSeq gene 2495 3310 . + . ID=gene-D5F94_RS10255;Name=D5F94_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10255;old_locus_tag=D5F94_10260 NZ_QYTD01000024.1 Protein Homology CDS 2495 3310 . + 0 ID=cds-WP_000727922.1;Parent=gene-D5F94_RS10255;Dbxref=GenBank:WP_000727922.1;Name=WP_000727922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727922.1;locus_tag=D5F94_RS10255;product=membrane protein insertase YidC;protein_id=WP_000727922.1;transl_table=11 NZ_QYTD01000024.1 RefSeq gene 3318 4139 . + . ID=gene-D5F94_RS10260;Name=jag;gbkey=Gene;gene=jag;gene_biotype=protein_coding;locus_tag=D5F94_RS10260;old_locus_tag=D5F94_10265 NZ_QYTD01000024.1 Protein Homology CDS 3318 4139 . + 0 ID=cds-WP_124749175.1;Parent=gene-D5F94_RS10260;Dbxref=GenBank:WP_124749175.1;Name=WP_124749175.1;Ontology_term=GO:0003676,GO:0003723;gbkey=CDS;gene=jag;go_function=nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF041568.1;locus_tag=D5F94_RS10260;product=RNA-binding cell elongation regulator Jag/EloR;protein_id=WP_124749175.1;transl_table=11 ##sequence-region NZ_QYTD01000025.1 1 3968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000025.1 RefSeq region 1 3968 . + . ID=NZ_QYTD01000025.1:1..3968;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000025.1 RefSeq gene 1 205 . + . ID=gene-D5F94_RS10265;Name=D5F94_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10265;old_locus_tag=D5F94_10270;partial=true;start_range=.,1 NZ_QYTD01000025.1 Protein Homology CDS 1 205 . + 1 ID=cds-WP_142358546.1;Parent=gene-D5F94_RS10265;Dbxref=GenBank:WP_142358546.1;Name=WP_142358546.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10265;partial=true;product=IS3 family transposase;protein_id=WP_142358546.1;start_range=.,1;transl_table=11 NZ_QYTD01000025.1 RefSeq pseudogene 242 349 . - . ID=gene-D5F94_RS10270;Name=D5F94_RS10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10270;old_locus_tag=D5F94_10275;partial=true;pseudo=true;start_range=.,242 NZ_QYTD01000025.1 Protein Homology CDS 242 349 . - 0 ID=cds-D5F94_RS10270;Parent=gene-D5F94_RS10270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018164041.1;locus_tag=D5F94_RS10270;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,242;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 385 630 . - . ID=gene-D5F94_RS10275;Name=D5F94_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10275;old_locus_tag=D5F94_10280 NZ_QYTD01000025.1 Protein Homology CDS 385 630 . - 0 ID=cds-WP_016480453.1;Parent=gene-D5F94_RS10275;Dbxref=GenBank:WP_016480453.1;Name=WP_016480453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205112.1;locus_tag=D5F94_RS10275;product=hypothetical protein;protein_id=WP_016480453.1;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 1215 1568 . + . ID=gene-D5F94_RS10280;Name=D5F94_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10280;old_locus_tag=D5F94_10285 NZ_QYTD01000025.1 Protein Homology CDS 1215 1568 . + 0 ID=cds-WP_016480454.1;Parent=gene-D5F94_RS10280;Dbxref=GenBank:WP_016480454.1;Name=WP_016480454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000395811.1;locus_tag=D5F94_RS10280;product=helix-turn-helix domain-containing protein;protein_id=WP_016480454.1;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 1645 1824 . + . ID=gene-D5F94_RS10285;Name=D5F94_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10285;old_locus_tag=D5F94_10290 NZ_QYTD01000025.1 Protein Homology CDS 1645 1824 . + 0 ID=cds-WP_016480455.1;Parent=gene-D5F94_RS10285;Dbxref=GenBank:WP_016480455.1;Name=WP_016480455.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480455.1;locus_tag=D5F94_RS10285;product=helix-turn-helix transcriptional regulator;protein_id=WP_016480455.1;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 2041 2361 . + . ID=gene-D5F94_RS10680;Name=D5F94_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10680 NZ_QYTD01000025.1 Protein Homology CDS 2041 2361 . + 0 ID=cds-WP_260424809.1;Parent=gene-D5F94_RS10680;Dbxref=GenBank:WP_260424809.1;Name=WP_260424809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.6;locus_tag=D5F94_RS10680;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_260424809.1;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 2393 2905 . + . ID=gene-D5F94_RS10685;Name=D5F94_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10685 NZ_QYTD01000025.1 Protein Homology CDS 2393 2905 . + 0 ID=cds-WP_375804263.1;Parent=gene-D5F94_RS10685;Dbxref=GenBank:WP_375804263.1;Name=WP_375804263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.6;locus_tag=D5F94_RS10685;product=hypothetical protein;protein_id=WP_375804263.1;transl_table=11 NZ_QYTD01000025.1 RefSeq gene 3117 3422 . + . ID=gene-D5F94_RS10295;Name=D5F94_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10295;old_locus_tag=D5F94_10300 NZ_QYTD01000025.1 Protein Homology CDS 3117 3422 . + 0 ID=cds-WP_307777618.1;Parent=gene-D5F94_RS10295;Dbxref=GenBank:WP_307777618.1;Name=WP_307777618.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.7;locus_tag=D5F94_RS10295;product=FtsX-like permease family protein;protein_id=WP_307777618.1;transl_table=11 NZ_QYTD01000025.1 RefSeq pseudogene 3824 3968 . + . ID=gene-D5F94_RS10300;Name=D5F94_RS10300;end_range=3968,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10300;old_locus_tag=D5F94_10305;partial=true;pseudo=true NZ_QYTD01000025.1 Protein Homology CDS 3824 3968 . + 0 ID=cds-D5F94_RS10300;Parent=gene-D5F94_RS10300;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F94_RS10300;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000026.1 1 3323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000026.1 RefSeq region 1 3323 . + . ID=NZ_QYTD01000026.1:1..3323;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000026.1 RefSeq pseudogene 167 469 . + . ID=gene-D5F94_RS10305;Name=D5F94_RS10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10305;old_locus_tag=D5F94_10310;partial=true;pseudo=true;start_range=.,167 NZ_QYTD01000026.1 Protein Homology CDS 167 469 . + 0 ID=cds-D5F94_RS10305;Parent=gene-D5F94_RS10305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643540.1;locus_tag=D5F94_RS10305;partial=true;product=ISLre2 family transposase;pseudo=true;start_range=.,167;transl_table=11 NZ_QYTD01000026.1 RefSeq gene 1020 1907 . + . ID=gene-D5F94_RS10310;Name=D5F94_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10310;old_locus_tag=D5F94_10315 NZ_QYTD01000026.1 Protein Homology CDS 1020 1907 . + 0 ID=cds-WP_016502728.1;Parent=gene-D5F94_RS10310;Dbxref=GenBank:WP_016502728.1;Name=WP_016502728.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049649.1;locus_tag=D5F94_RS10310;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016502728.1;transl_table=11 NZ_QYTD01000026.1 RefSeq gene 2105 2836 . + . ID=gene-D5F94_RS10315;Name=D5F94_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10315;old_locus_tag=D5F94_10320 NZ_QYTD01000026.1 Protein Homology CDS 2105 2836 . + 0 ID=cds-WP_016502727.1;Parent=gene-D5F94_RS10315;Dbxref=GenBank:WP_016502727.1;Name=WP_016502727.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=D5F94_RS10315;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_016502727.1;transl_table=11 NZ_QYTD01000026.1 RefSeq pseudogene 3160 3323 . - . ID=gene-D5F94_RS10320;Name=D5F94_RS10320;end_range=3323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10320;old_locus_tag=D5F94_10325;partial=true;pseudo=true NZ_QYTD01000026.1 Protein Homology CDS 3160 3323 . - 1 ID=cds-D5F94_RS10320;Parent=gene-D5F94_RS10320;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10320;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000027.1 1 5428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000027.1 RefSeq region 1 5428 . + . ID=NZ_QYTD01000027.1:1..5428;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000027.1 RefSeq gene 173 766 . - . ID=gene-D5F94_RS10325;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=D5F94_RS10325;old_locus_tag=D5F94_10330 NZ_QYTD01000027.1 Protein Homology CDS 173 766 . - 0 ID=cds-WP_000930247.1;Parent=gene-D5F94_RS10325;Dbxref=GenBank:WP_000930247.1;Name=WP_000930247.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770961.1;locus_tag=D5F94_RS10325;product=dephospho-CoA kinase;protein_id=WP_000930247.1;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 757 1578 . - . ID=gene-D5F94_RS10330;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=D5F94_RS10330;old_locus_tag=D5F94_10335 NZ_QYTD01000027.1 Protein Homology CDS 757 1578 . - 0 ID=cds-WP_016503065.1;Parent=gene-D5F94_RS10330;Dbxref=GenBank:WP_016503065.1;Name=WP_016503065.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114601.1;locus_tag=D5F94_RS10330;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_016503065.1;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 1727 2575 . - . ID=gene-D5F94_RS10335;Name=rgg2;gbkey=Gene;gene=rgg2;gene_biotype=protein_coding;locus_tag=D5F94_RS10335;old_locus_tag=D5F94_10340 NZ_QYTD01000027.1 Protein Homology CDS 1727 2575 . - 0 ID=cds-WP_000410031.1;Parent=gene-D5F94_RS10335;Dbxref=GenBank:WP_000410031.1;Name=WP_000410031.1;gbkey=CDS;gene=rgg2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648250.1;locus_tag=D5F94_RS10335;product=quorum-sensing system transcriptional regulator Rgg2;protein_id=WP_000410031.1;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 2663 2731 . + . ID=gene-D5F94_RS10525;Name=shp2;gbkey=Gene;gene=shp2;gene_biotype=protein_coding;locus_tag=D5F94_RS10525 NZ_QYTD01000027.1 Protein Homology CDS 2663 2731 . + 0 ID=cds-WP_132833258.1;Parent=gene-D5F94_RS10525;Dbxref=GenBank:WP_132833258.1;Name=WP_132833258.1;gbkey=CDS;gene=shp2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128650799.1;locus_tag=D5F94_RS10525;product=peptide pheromone SHP2;protein_id=WP_132833258.1;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 2793 4385 . + . ID=gene-D5F94_RS10340;Name=D5F94_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10340;old_locus_tag=D5F94_10345 NZ_QYTD01000027.1 Protein Homology CDS 2793 4385 . + 0 ID=cds-WP_086163426.1;Parent=gene-D5F94_RS10340;Dbxref=GenBank:WP_086163426.1;Name=WP_086163426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646210.1;locus_tag=D5F94_RS10340;product=transglutaminase domain-containing protein;protein_id=WP_086163426.1;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 4421 4597 . + . ID=gene-D5F94_RS10345;Name=D5F94_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10345;old_locus_tag=D5F94_10350 NZ_QYTD01000027.1 Protein Homology CDS 4421 4597 . + 0 ID=cds-WP_000039432.1;Parent=gene-D5F94_RS10345;Dbxref=GenBank:WP_000039432.1;Name=WP_000039432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039432.1;locus_tag=D5F94_RS10345;product=hypothetical protein;protein_id=WP_000039432.1;transl_table=11 NZ_QYTD01000027.1 RefSeq pseudogene 4647 4840 . - . ID=gene-D5F94_RS10690;Name=D5F94_RS10690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10690;old_locus_tag=D5F94_10355;pseudo=true NZ_QYTD01000027.1 Protein Homology CDS 4647 4840 . - 0 ID=cds-D5F94_RS10690;Parent=gene-D5F94_RS10690;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001878969.1;locus_tag=D5F94_RS10690;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000027.1 RefSeq gene 4839 5033 . + . ID=gene-D5F94_RS10355;Name=D5F94_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10355;old_locus_tag=D5F94_10360 NZ_QYTD01000027.1 Protein Homology CDS 4839 5033 . + 0 ID=cds-WP_086163427.1;Parent=gene-D5F94_RS10355;Dbxref=GenBank:WP_086163427.1;Name=WP_086163427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606011.1;locus_tag=D5F94_RS10355;product=hypothetical protein;protein_id=WP_086163427.1;transl_table=11 NZ_QYTD01000027.1 RefSeq pseudogene 5232 5428 . - . ID=gene-D5F94_RS10365;Name=D5F94_RS10365;end_range=5428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10365;old_locus_tag=D5F94_10370;partial=true;pseudo=true NZ_QYTD01000027.1 Protein Homology CDS 5232 5428 . - 2 ID=cds-D5F94_RS10365;Parent=gene-D5F94_RS10365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226747.1;locus_tag=D5F94_RS10365;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000028.1 1 3696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000028.1 RefSeq region 1 3696 . + . ID=NZ_QYTD01000028.1:1..3696;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000028.1 RefSeq gene 22 94 . + . ID=gene-D5F94_RS10370;Name=D5F94_RS10370;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10370;old_locus_tag=D5F94_10375 NZ_QYTD01000028.1 tRNAscan-SE tRNA 22 94 . + . ID=rna-D5F94_RS10370;Parent=gene-D5F94_RS10370;anticodon=(pos:55..57);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10370;product=tRNA-His NZ_QYTD01000028.1 tRNAscan-SE exon 22 94 . + . ID=exon-D5F94_RS10370-1;Parent=rna-D5F94_RS10370;anticodon=(pos:55..57);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10370;product=tRNA-His NZ_QYTD01000028.1 RefSeq gene 101 172 . + . ID=gene-D5F94_RS10375;Name=D5F94_RS10375;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10375;old_locus_tag=D5F94_10380 NZ_QYTD01000028.1 tRNAscan-SE tRNA 101 172 . + . ID=rna-D5F94_RS10375;Parent=gene-D5F94_RS10375;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10375;product=tRNA-Gln NZ_QYTD01000028.1 tRNAscan-SE exon 101 172 . + . ID=exon-D5F94_RS10375-1;Parent=rna-D5F94_RS10375;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10375;product=tRNA-Gln NZ_QYTD01000028.1 RefSeq gene 183 266 . + . ID=gene-D5F94_RS10380;Name=D5F94_RS10380;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS10380;old_locus_tag=D5F94_10385 NZ_QYTD01000028.1 tRNAscan-SE tRNA 183 266 . + . ID=rna-D5F94_RS10380;Parent=gene-D5F94_RS10380;anticodon=(pos:217..219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10380;product=tRNA-Leu NZ_QYTD01000028.1 tRNAscan-SE exon 183 266 . + . ID=exon-D5F94_RS10380-1;Parent=rna-D5F94_RS10380;anticodon=(pos:217..219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS10380;product=tRNA-Leu NZ_QYTD01000028.1 RefSeq gene 680 1111 . + . ID=gene-D5F94_RS10695;Name=D5F94_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10695 NZ_QYTD01000028.1 Protein Homology CDS 680 1111 . + 0 ID=cds-WP_000761053.1;Parent=gene-D5F94_RS10695;Dbxref=GenBank:WP_000761053.1;Name=WP_000761053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480188.1;locus_tag=D5F94_RS10695;product=hypothetical protein;protein_id=WP_000761053.1;transl_table=11 NZ_QYTD01000028.1 RefSeq gene 1181 1351 . + . ID=gene-D5F94_RS10395;Name=D5F94_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10395;old_locus_tag=D5F94_10400 NZ_QYTD01000028.1 Protein Homology CDS 1181 1351 . + 0 ID=cds-WP_000840973.1;Parent=gene-D5F94_RS10395;Dbxref=GenBank:WP_000840973.1;Name=WP_000840973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840973.1;locus_tag=D5F94_RS10395;product=hypothetical protein;protein_id=WP_000840973.1;transl_table=11 NZ_QYTD01000028.1 RefSeq gene 2267 2818 . + . ID=gene-D5F94_RS10400;Name=D5F94_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10400;old_locus_tag=D5F94_10405 NZ_QYTD01000028.1 Protein Homology CDS 2267 2818 . + 0 ID=cds-WP_000161847.1;Parent=gene-D5F94_RS10400;Dbxref=GenBank:WP_000161847.1;Name=WP_000161847.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631726.1;locus_tag=D5F94_RS10400;product=nucleotidyltransferase family protein;protein_id=WP_000161847.1;transl_table=11 NZ_QYTD01000028.1 RefSeq pseudogene 3044 3456 . + . ID=gene-D5F94_RS10405;Name=D5F94_RS10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10405;old_locus_tag=D5F94_10410;pseudo=true NZ_QYTD01000028.1 Protein Homology CDS 3044 3456 . + 0 ID=cds-D5F94_RS10405;Parent=gene-D5F94_RS10405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022654.6;locus_tag=D5F94_RS10405;product=YjdF family protein;pseudo=true;transl_table=11 NZ_QYTD01000028.1 RefSeq pseudogene 3526 3696 . - . ID=gene-D5F94_RS10410;Name=D5F94_RS10410;end_range=3696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10410;old_locus_tag=D5F94_10415;partial=true;pseudo=true NZ_QYTD01000028.1 Protein Homology CDS 3526 3696 . - 0 ID=cds-D5F94_RS10410;Parent=gene-D5F94_RS10410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3696,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10410;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000029.1 1 1754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000029.1 RefSeq region 1 1754 . + . ID=NZ_QYTD01000029.1:1..1754;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000029.1 RefSeq pseudogene 149 337 . + . ID=gene-D5F94_RS10415;Name=D5F94_RS10415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10415;old_locus_tag=D5F94_10420;partial=true;pseudo=true;start_range=.,149 NZ_QYTD01000029.1 Protein Homology CDS 149 337 . + 0 ID=cds-D5F94_RS10415;Parent=gene-D5F94_RS10415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335070.1;locus_tag=D5F94_RS10415;partial=true;product=hypothetical protein;pseudo=true;start_range=.,149;transl_table=11 NZ_QYTD01000029.1 RefSeq gene 337 561 . + . ID=gene-D5F94_RS10420;Name=D5F94_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10420;old_locus_tag=D5F94_10425 NZ_QYTD01000029.1 Protein Homology CDS 337 561 . + 0 ID=cds-WP_016480260.1;Parent=gene-D5F94_RS10420;Dbxref=GenBank:WP_016480260.1;Name=WP_016480260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020816.1;locus_tag=D5F94_RS10420;product=hypothetical protein;protein_id=WP_016480260.1;transl_table=11 NZ_QYTD01000029.1 RefSeq gene 578 1528 . + . ID=gene-D5F94_RS10425;Name=D5F94_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10425;old_locus_tag=D5F94_10430 NZ_QYTD01000029.1 Protein Homology CDS 578 1528 . + 0 ID=cds-WP_260424811.1;Parent=gene-D5F94_RS10425;Dbxref=GenBank:WP_260424811.1;Name=WP_260424811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480259.1;locus_tag=D5F94_RS10425;product=phage tail tip lysozyme;protein_id=WP_260424811.1;transl_table=11 NZ_QYTD01000029.1 RefSeq gene 1591 1754 . + . ID=gene-D5F94_RS10430;Name=D5F94_RS10430;end_range=1754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10430;old_locus_tag=D5F94_10435;partial=true NZ_QYTD01000029.1 Protein Homology CDS 1591 1754 . + 0 ID=cds-WP_142997324.1;Parent=gene-D5F94_RS10430;Dbxref=GenBank:WP_142997324.1;Name=WP_142997324.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1754,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS10430;partial=true;product=transposase;protein_id=WP_142997324.1;transl_table=11 ##sequence-region NZ_QYTD01000003.1 1 512816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000003.1 RefSeq region 1 512816 . + . ID=NZ_QYTD01000003.1:1..512816;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000003.1 RefSeq gene 379 807 . + . ID=gene-D5F94_RS01910;Name=D5F94_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01910;old_locus_tag=D5F94_01910 NZ_QYTD01000003.1 Protein Homology CDS 379 807 . + 0 ID=cds-WP_221620252.1;Parent=gene-D5F94_RS01910;Dbxref=GenBank:WP_221620252.1;Name=WP_221620252.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001865677.1;locus_tag=D5F94_RS01910;product=FtsX-like permease family protein;protein_id=WP_221620252.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 904 1575 . + . ID=gene-D5F94_RS01915;Name=D5F94_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01915;old_locus_tag=D5F94_01915 NZ_QYTD01000003.1 Protein Homology CDS 904 1575 . + 0 ID=cds-WP_016480593.1;Parent=gene-D5F94_RS01915;Dbxref=GenBank:WP_016480593.1;Name=WP_016480593.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891268.1;locus_tag=D5F94_RS01915;product=ATP-binding cassette domain-containing protein;protein_id=WP_016480593.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 1631 3076 . - . ID=gene-D5F94_RS01920;Name=D5F94_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01920;old_locus_tag=D5F94_01920 NZ_QYTD01000003.1 Protein Homology CDS 1631 3076 . - 0 ID=cds-WP_185690647.1;Parent=gene-D5F94_RS01920;Dbxref=GenBank:WP_185690647.1;Name=WP_185690647.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646061.1;locus_tag=D5F94_RS01920;product=FAD/NAD(P)-binding protein;protein_id=WP_185690647.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 3337 4122 . + . ID=gene-D5F94_RS01925;Name=D5F94_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01925;old_locus_tag=D5F94_01925 NZ_QYTD01000003.1 Protein Homology CDS 3337 4122 . + 0 ID=cds-WP_000825437.1;Parent=gene-D5F94_RS01925;Dbxref=GenBank:WP_000825437.1;Name=WP_000825437.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825435.1;locus_tag=D5F94_RS01925;product=DNA/RNA non-specific endonuclease;protein_id=WP_000825437.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 4200 4838 . - . ID=gene-D5F94_RS01930;Name=D5F94_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01930;old_locus_tag=D5F94_01930 NZ_QYTD01000003.1 Protein Homology CDS 4200 4838 . - 0 ID=cds-WP_000478529.1;Parent=gene-D5F94_RS01930;Dbxref=GenBank:WP_000478529.1;Name=WP_000478529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502751.1;locus_tag=D5F94_RS01930;product=VTT domain-containing protein;protein_id=WP_000478529.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 5055 5711 . + . ID=gene-D5F94_RS01935;Name=D5F94_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01935;old_locus_tag=D5F94_01935 NZ_QYTD01000003.1 Protein Homology CDS 5055 5711 . + 0 ID=cds-WP_016480595.1;Parent=gene-D5F94_RS01935;Dbxref=GenBank:WP_016480595.1;Name=WP_016480595.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058454.1;locus_tag=D5F94_RS01935;product=ABC transporter ATP-binding protein;protein_id=WP_016480595.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 5708 6481 . + . ID=gene-D5F94_RS01940;Name=D5F94_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01940;old_locus_tag=D5F94_01940 NZ_QYTD01000003.1 Protein Homology CDS 5708 6481 . + 0 ID=cds-WP_000011926.1;Parent=gene-D5F94_RS01940;Dbxref=GenBank:WP_000011926.1;Name=WP_000011926.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771489.1;locus_tag=D5F94_RS01940;product=ABC transporter permease;protein_id=WP_000011926.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 6645 7463 . + . ID=gene-D5F94_RS01945;Name=D5F94_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01945;old_locus_tag=D5F94_01945 NZ_QYTD01000003.1 Protein Homology CDS 6645 7463 . + 0 ID=cds-WP_016502752.1;Parent=gene-D5F94_RS01945;Dbxref=GenBank:WP_016502752.1;Name=WP_016502752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058456.1;locus_tag=D5F94_RS01945;product=hypothetical protein;protein_id=WP_016502752.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 7500 8384 . - . ID=gene-D5F94_RS01950;Name=D5F94_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01950;old_locus_tag=D5F94_01950 NZ_QYTD01000003.1 Protein Homology CDS 7500 8384 . - 0 ID=cds-WP_000354839.1;Parent=gene-D5F94_RS01950;Dbxref=GenBank:WP_000354839.1;Name=WP_000354839.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354842.1;locus_tag=D5F94_RS01950;product=LysR family transcriptional regulator;protein_id=WP_000354839.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 8577 9635 . + . ID=gene-D5F94_RS01955;Name=D5F94_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01955;old_locus_tag=D5F94_01955 NZ_QYTD01000003.1 Protein Homology CDS 8577 9635 . + 0 ID=cds-WP_001286427.1;Parent=gene-D5F94_RS01955;Dbxref=GenBank:WP_001286427.1;Name=WP_001286427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631865.1;locus_tag=D5F94_RS01955;product=PTS transporter subunit IIC;protein_id=WP_001286427.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 9649 10641 . + . ID=gene-D5F94_RS01960;Name=D5F94_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01960;old_locus_tag=D5F94_01960 NZ_QYTD01000003.1 Protein Homology CDS 9649 10641 . + 0 ID=cds-WP_016502753.1;Parent=gene-D5F94_RS01960;Dbxref=GenBank:WP_016502753.1;Name=WP_016502753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770077.1;locus_tag=D5F94_RS01960;product=D-lactate dehydrogenase;protein_id=WP_016502753.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 10846 12396 . + . ID=gene-D5F94_RS01965;Name=D5F94_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01965;old_locus_tag=D5F94_01965 NZ_QYTD01000003.1 Protein Homology CDS 10846 12396 . + 0 ID=cds-WP_000416100.1;Parent=gene-D5F94_RS01965;Dbxref=GenBank:WP_000416100.1;Name=WP_000416100.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416102.1;locus_tag=D5F94_RS01965;product=MFS transporter;protein_id=WP_000416100.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 12463 13488 . + . ID=gene-D5F94_RS01970;Name=D5F94_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01970;old_locus_tag=D5F94_01970 NZ_QYTD01000003.1 Protein Homology CDS 12463 13488 . + 0 ID=cds-WP_016480598.1;Parent=gene-D5F94_RS01970;Dbxref=GenBank:WP_016480598.1;Name=WP_016480598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480598.1;locus_tag=D5F94_RS01970;product=sugar kinase;protein_id=WP_016480598.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 13505 15304 . + . ID=gene-D5F94_RS01975;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=D5F94_RS01975;old_locus_tag=D5F94_01975 NZ_QYTD01000003.1 Protein Homology CDS 13505 15304 . + 0 ID=cds-WP_016480599.1;Parent=gene-D5F94_RS01975;Dbxref=GenBank:WP_016480599.1;Name=WP_016480599.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767467.1;locus_tag=D5F94_RS01975;product=beta-glucuronidase;protein_id=WP_016480599.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 15333 16004 . + . ID=gene-D5F94_RS01980;Name=D5F94_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01980;old_locus_tag=D5F94_01980 NZ_QYTD01000003.1 Protein Homology CDS 15333 16004 . + 0 ID=cds-WP_000113632.1;Parent=gene-D5F94_RS01980;Dbxref=GenBank:WP_000113632.1;Name=WP_000113632.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113633.1;locus_tag=D5F94_RS01980;product=FadR/GntR family transcriptional regulator;protein_id=WP_000113632.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 16085 16738 . + . ID=gene-D5F94_RS01990;Name=D5F94_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS01990;old_locus_tag=D5F94_01990 NZ_QYTD01000003.1 Protein Homology CDS 16085 16738 . + 0 ID=cds-WP_370443800.1;Parent=gene-D5F94_RS01990;Dbxref=GenBank:WP_370443800.1;Name=WP_370443800.1;Ontology_term=GO:0008675,GO:0008700;gbkey=CDS;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089773.1;locus_tag=D5F94_RS01990;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_370443800.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 16755 18155 . + . ID=gene-D5F94_RS01995;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=D5F94_RS01995;old_locus_tag=D5F94_01995 NZ_QYTD01000003.1 Protein Homology CDS 16755 18155 . + 0 ID=cds-WP_124749348.1;Parent=gene-D5F94_RS01995;Dbxref=GenBank:WP_124749348.1;Name=WP_124749348.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771913.1;locus_tag=D5F94_RS01995;product=glucuronate isomerase;protein_id=WP_124749348.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 18173 19219 . + . ID=gene-D5F94_RS02000;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=D5F94_RS02000;old_locus_tag=D5F94_02000 NZ_QYTD01000003.1 Protein Homology CDS 18173 19219 . + 0 ID=cds-WP_000426044.1;Parent=gene-D5F94_RS02000;Dbxref=GenBank:WP_000426044.1;Name=WP_000426044.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426051.1;locus_tag=D5F94_RS02000;product=mannonate dehydratase;protein_id=WP_000426044.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 19343 20182 . + . ID=gene-D5F94_RS02005;Name=D5F94_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02005;old_locus_tag=D5F94_02005 NZ_QYTD01000003.1 Protein Homology CDS 19343 20182 . + 0 ID=cds-WP_016502756.1;Parent=gene-D5F94_RS02005;Dbxref=GenBank:WP_016502756.1;Name=WP_016502756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047575.1;locus_tag=D5F94_RS02005;product=SDR family oxidoreductase;protein_id=WP_016502756.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 20335 21147 . + . ID=gene-D5F94_RS02010;Name=D5F94_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02010;old_locus_tag=D5F94_02010 NZ_QYTD01000003.1 Protein Homology CDS 20335 21147 . + 0 ID=cds-WP_016480602.1;Parent=gene-D5F94_RS02010;Dbxref=GenBank:WP_016480602.1;Name=WP_016480602.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228641.1;locus_tag=D5F94_RS02010;product=HAD family hydrolase;protein_id=WP_016480602.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 21163 22953 . + . ID=gene-D5F94_RS02015;Name=D5F94_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02015;old_locus_tag=D5F94_02015 NZ_QYTD01000003.1 Protein Homology CDS 21163 22953 . + 0 ID=cds-WP_016502757.1;Parent=gene-D5F94_RS02015;Dbxref=GenBank:WP_016502757.1;Name=WP_016502757.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149450.1;locus_tag=D5F94_RS02015;product=glycoside hydrolase family 3 protein;protein_id=WP_016502757.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 23011 24096 . - . ID=gene-D5F94_RS02020;Name=D5F94_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02020;old_locus_tag=D5F94_02020 NZ_QYTD01000003.1 Protein Homology CDS 23011 24096 . - 0 ID=cds-WP_124749349.1;Parent=gene-D5F94_RS02020;Dbxref=GenBank:WP_124749349.1;Name=WP_124749349.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040814.1;locus_tag=D5F94_RS02020;product=M24 family metallopeptidase;protein_id=WP_124749349.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 24306 25310 . + . ID=gene-D5F94_RS02025;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=D5F94_RS02025;old_locus_tag=D5F94_02025 NZ_QYTD01000003.1 Protein Homology CDS 24306 25310 . + 0 ID=cds-WP_001090621.1;Parent=gene-D5F94_RS02025;Dbxref=GenBank:WP_001090621.1;Name=WP_001090621.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058462.1;locus_tag=D5F94_RS02025;product=catabolite control protein A;protein_id=WP_001090621.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 25442 26908 . + . ID=gene-D5F94_RS02030;Name=D5F94_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02030;old_locus_tag=D5F94_02030 NZ_QYTD01000003.1 Protein Homology CDS 25442 26908 . + 0 ID=cds-WP_124749350.1;Parent=gene-D5F94_RS02030;Dbxref=GenBank:WP_124749350.1;Name=WP_124749350.1;Ontology_term=GO:0005975,GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180581.1;locus_tag=D5F94_RS02030;product=alpha-amylase;protein_id=WP_124749350.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 26953 27951 . + . ID=gene-D5F94_RS02035;Name=D5F94_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02035;old_locus_tag=D5F94_02035 NZ_QYTD01000003.1 Protein Homology CDS 26953 27951 . + 0 ID=cds-WP_016502760.1;Parent=gene-D5F94_RS02035;Dbxref=GenBank:WP_016502760.1;Name=WP_016502760.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502760.1;locus_tag=D5F94_RS02035;product=glycosyltransferase family 4 protein;protein_id=WP_016502760.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 27953 29251 . + . ID=gene-D5F94_RS02040;Name=D5F94_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02040;old_locus_tag=D5F94_02040 NZ_QYTD01000003.1 Protein Homology CDS 27953 29251 . + 0 ID=cds-WP_375804261.1;Parent=gene-D5F94_RS02040;Dbxref=GenBank:WP_375804261.1;Name=WP_375804261.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854676.1;locus_tag=D5F94_RS02040;product=glycosyltransferase family 4 protein;protein_id=WP_375804261.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 29745 31688 . + . ID=gene-D5F94_RS02045;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=D5F94_RS02045;old_locus_tag=D5F94_02045 NZ_QYTD01000003.1 Protein Homology CDS 29745 31688 . + 0 ID=cds-WP_124749351.1;Parent=gene-D5F94_RS02045;Dbxref=GenBank:WP_124749351.1;Name=WP_124749351.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645271.1;locus_tag=D5F94_RS02045;product=threonine--tRNA ligase;protein_id=WP_124749351.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 31910 32614 . + . ID=gene-D5F94_RS02050;Name=D5F94_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02050;old_locus_tag=D5F94_02050 NZ_QYTD01000003.1 Protein Homology CDS 31910 32614 . + 0 ID=cds-WP_001261248.1;Parent=gene-D5F94_RS02050;Dbxref=GenBank:WP_001261248.1;Name=WP_001261248.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649585.1;locus_tag=D5F94_RS02050;product=response regulator transcription factor;protein_id=WP_001261248.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 32712 33731 . + . ID=gene-D5F94_RS02055;Name=D5F94_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02055;old_locus_tag=D5F94_02055 NZ_QYTD01000003.1 Protein Homology CDS 32712 33731 . + 0 ID=cds-WP_016502762.1;Parent=gene-D5F94_RS02055;Dbxref=GenBank:WP_016502762.1;Name=WP_016502762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140268.1;locus_tag=D5F94_RS02055;product=DUF3114 domain-containing protein;protein_id=WP_016502762.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 33898 34464 . + . ID=gene-D5F94_RS02060;Name=D5F94_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02060;old_locus_tag=D5F94_02060 NZ_QYTD01000003.1 Protein Homology CDS 33898 34464 . + 0 ID=cds-WP_000592389.1;Parent=gene-D5F94_RS02060;Dbxref=GenBank:WP_000592389.1;Name=WP_000592389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644199.1;locus_tag=D5F94_RS02060;product=PepSY domain-containing protein;protein_id=WP_000592389.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 34513 35163 . - . ID=gene-D5F94_RS02065;Name=D5F94_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02065;old_locus_tag=D5F94_02065 NZ_QYTD01000003.1 Protein Homology CDS 34513 35163 . - 0 ID=cds-WP_000100034.1;Parent=gene-D5F94_RS02065;Dbxref=GenBank:WP_000100034.1;Name=WP_000100034.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100031.1;locus_tag=D5F94_RS02065;product=amino acid ABC transporter permease;protein_id=WP_000100034.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 35175 35870 . - . ID=gene-D5F94_RS02070;Name=D5F94_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02070;old_locus_tag=D5F94_02070 NZ_QYTD01000003.1 Protein Homology CDS 35175 35870 . - 0 ID=cds-WP_016502763.1;Parent=gene-D5F94_RS02070;Dbxref=GenBank:WP_016502763.1;Name=WP_016502763.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502763.1;locus_tag=D5F94_RS02070;product=amino acid ABC transporter permease;protein_id=WP_016502763.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 35867 36682 . - . ID=gene-D5F94_RS02075;Name=D5F94_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02075;old_locus_tag=D5F94_02075 NZ_QYTD01000003.1 Protein Homology CDS 35867 36682 . - 0 ID=cds-WP_124749352.1;Parent=gene-D5F94_RS02075;Dbxref=GenBank:WP_124749352.1;Name=WP_124749352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946174.1;locus_tag=D5F94_RS02075;product=transporter substrate-binding domain-containing protein;protein_id=WP_124749352.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 36694 37449 . - . ID=gene-D5F94_RS02080;Name=D5F94_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02080;old_locus_tag=D5F94_02080 NZ_QYTD01000003.1 Protein Homology CDS 36694 37449 . - 0 ID=cds-WP_016480611.1;Parent=gene-D5F94_RS02080;Dbxref=GenBank:WP_016480611.1;Name=WP_016480611.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053145.1;locus_tag=D5F94_RS02080;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_016480611.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 37789 38499 . + . ID=gene-D5F94_RS02085;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=D5F94_RS02085;old_locus_tag=D5F94_02085 NZ_QYTD01000003.1 Protein Homology CDS 37789 38499 . + 0 ID=cds-WP_000722052.1;Parent=gene-D5F94_RS02085;Dbxref=GenBank:WP_000722052.1;Name=WP_000722052.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722051.1;locus_tag=D5F94_RS02085;product=response regulator YycF;protein_id=WP_000722052.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 38492 39841 . + . ID=gene-D5F94_RS02090;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=D5F94_RS02090;old_locus_tag=D5F94_02090 NZ_QYTD01000003.1 Protein Homology CDS 38492 39841 . + 0 ID=cds-WP_001065469.1;Parent=gene-D5F94_RS02090;Dbxref=GenBank:WP_001065469.1;Name=WP_001065469.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065466.1;locus_tag=D5F94_RS02090;product=cell wall metabolism sensor histidine kinase VicK;protein_id=WP_001065469.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 39845 40654 . + . ID=gene-D5F94_RS02095;Name=D5F94_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02095;old_locus_tag=D5F94_02095 NZ_QYTD01000003.1 Protein Homology CDS 39845 40654 . + 0 ID=cds-WP_001289498.1;Parent=gene-D5F94_RS02095;Dbxref=GenBank:WP_001289498.1;Name=WP_001289498.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631879.1;locus_tag=D5F94_RS02095;product=MBL fold metallo-hydrolase;protein_id=WP_001289498.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 40657 41025 . + . ID=gene-D5F94_RS02100;Name=D5F94_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02100;old_locus_tag=D5F94_02100 NZ_QYTD01000003.1 Protein Homology CDS 40657 41025 . + 0 ID=cds-WP_000719385.1;Parent=gene-D5F94_RS02100;Dbxref=GenBank:WP_000719385.1;Name=WP_000719385.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647157.1;locus_tag=D5F94_RS02100;product=YbaN family protein;protein_id=WP_000719385.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 41201 41887 . + . ID=gene-D5F94_RS02105;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=D5F94_RS02105;old_locus_tag=D5F94_02105 NZ_QYTD01000003.1 Protein Homology CDS 41201 41887 . + 0 ID=cds-WP_016502766.1;Parent=gene-D5F94_RS02105;Dbxref=GenBank:WP_016502766.1;Name=WP_016502766.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631881.1;locus_tag=D5F94_RS02105;product=ribonuclease III;protein_id=WP_016502766.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 41895 45434 . + . ID=gene-D5F94_RS02110;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=D5F94_RS02110;old_locus_tag=D5F94_02110 NZ_QYTD01000003.1 Protein Homology CDS 41895 45434 . + 0 ID=cds-WP_086163294.1;Parent=gene-D5F94_RS02110;Dbxref=GenBank:WP_086163294.1;Name=WP_086163294.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650979.1;locus_tag=D5F94_RS02110;product=chromosome segregation protein SMC;protein_id=WP_086163294.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 45525 46322 . + . ID=gene-D5F94_RS02115;Name=D5F94_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02115;old_locus_tag=D5F94_02115 NZ_QYTD01000003.1 Protein Homology CDS 45525 46322 . + 0 ID=cds-WP_000594097.1;Parent=gene-D5F94_RS02115;Dbxref=GenBank:WP_000594097.1;Name=WP_000594097.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480613.1;locus_tag=D5F94_RS02115;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000594097.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 46322 47146 . + . ID=gene-D5F94_RS02120;Name=D5F94_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02120;old_locus_tag=D5F94_02120 NZ_QYTD01000003.1 Protein Homology CDS 46322 47146 . + 0 ID=cds-WP_016502768.1;Parent=gene-D5F94_RS02120;Dbxref=GenBank:WP_016502768.1;Name=WP_016502768.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285093.1;locus_tag=D5F94_RS02120;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016502768.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 47146 48744 . + . ID=gene-D5F94_RS02125;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=D5F94_RS02125;old_locus_tag=D5F94_02125 NZ_QYTD01000003.1 Protein Homology CDS 47146 48744 . + 0 ID=cds-WP_124749353.1;Parent=gene-D5F94_RS02125;Dbxref=GenBank:WP_124749353.1;Name=WP_124749353.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522263.1;locus_tag=D5F94_RS02125;product=signal recognition particle-docking protein FtsY;protein_id=WP_124749353.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 48781 49593 . - . ID=gene-D5F94_RS02130;Name=D5F94_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02130;old_locus_tag=D5F94_02130 NZ_QYTD01000003.1 Protein Homology CDS 48781 49593 . - 0 ID=cds-WP_086163295.1;Parent=gene-D5F94_RS02130;Dbxref=GenBank:WP_086163295.1;Name=WP_086163295.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617812.1;locus_tag=D5F94_RS02130;product=TIGR03943 family putative permease subunit;protein_id=WP_086163295.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 49593 50495 . - . ID=gene-D5F94_RS02135;Name=D5F94_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02135;old_locus_tag=D5F94_02135 NZ_QYTD01000003.1 Protein Homology CDS 49593 50495 . - 0 ID=cds-WP_000350891.1;Parent=gene-D5F94_RS02135;Dbxref=GenBank:WP_000350891.1;Name=WP_000350891.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480616.1;locus_tag=D5F94_RS02135;product=permease;protein_id=WP_000350891.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 50501 50629 . - . ID=gene-D5F94_RS02140;Name=D5F94_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02140;old_locus_tag=D5F94_02140 NZ_QYTD01000003.1 Protein Homology CDS 50501 50629 . - 0 ID=cds-WP_001018624.1;Parent=gene-D5F94_RS02140;Dbxref=GenBank:WP_001018624.1;Name=WP_001018624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018624.1;locus_tag=D5F94_RS02140;product=SPJ_0845 family protein;protein_id=WP_001018624.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 50762 51805 . + . ID=gene-D5F94_RS02145;Name=D5F94_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02145;old_locus_tag=D5F94_02145 NZ_QYTD01000003.1 Protein Homology CDS 50762 51805 . + 0 ID=cds-WP_124749354.1;Parent=gene-D5F94_RS02145;Dbxref=GenBank:WP_124749354.1;Name=WP_124749354.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571058.1;locus_tag=D5F94_RS02145;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_124749354.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 51911 54073 . + . ID=gene-D5F94_RS02150;Name=D5F94_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02150;old_locus_tag=D5F94_02150 NZ_QYTD01000003.1 Protein Homology CDS 51911 54073 . + 0 ID=cds-WP_016502772.1;Parent=gene-D5F94_RS02150;Dbxref=GenBank:WP_016502772.1;Name=WP_016502772.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767169.1;locus_tag=D5F94_RS02150;product=Tex family protein;protein_id=WP_016502772.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 54036 54506 . + . ID=gene-D5F94_RS02155;Name=D5F94_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02155;old_locus_tag=D5F94_02155 NZ_QYTD01000003.1 Protein Homology CDS 54036 54506 . + 0 ID=cds-WP_000366648.1;Parent=gene-D5F94_RS02155;Dbxref=GenBank:WP_000366648.1;Name=WP_000366648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366650.1;locus_tag=D5F94_RS02155;product=SprT family protein;protein_id=WP_000366648.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 54575 54838 . + . ID=gene-D5F94_RS02160;Name=D5F94_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02160;old_locus_tag=D5F94_02160 NZ_QYTD01000003.1 Protein Homology CDS 54575 54838 . + 0 ID=cds-WP_000842478.1;Parent=gene-D5F94_RS02160;Dbxref=GenBank:WP_000842478.1;Name=WP_000842478.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771968.1;locus_tag=D5F94_RS02160;product=PspC domain-containing protein;protein_id=WP_000842478.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 55066 56001 . + . ID=gene-D5F94_RS02170;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=D5F94_RS02170;old_locus_tag=D5F94_02170 NZ_QYTD01000003.1 Protein Homology CDS 55066 56001 . + 0 ID=cds-WP_000301753.1;Parent=gene-D5F94_RS02170;Dbxref=GenBank:WP_000301753.1;Name=WP_000301753.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767755.1;locus_tag=D5F94_RS02170;product=HPr(Ser) kinase/phosphatase;protein_id=WP_000301753.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 55994 56767 . + . ID=gene-D5F94_RS02175;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=D5F94_RS02175;old_locus_tag=D5F94_02175 NZ_QYTD01000003.1 Protein Homology CDS 55994 56767 . + 0 ID=cds-WP_000609728.1;Parent=gene-D5F94_RS02175;Dbxref=GenBank:WP_000609728.1;Name=WP_000609728.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609727.1;locus_tag=D5F94_RS02175;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000609728.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 56782 57180 . + . ID=gene-D5F94_RS02180;Name=D5F94_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02180;old_locus_tag=D5F94_02180 NZ_QYTD01000003.1 Protein Homology CDS 56782 57180 . + 0 ID=cds-WP_086163298.1;Parent=gene-D5F94_RS02180;Dbxref=GenBank:WP_086163298.1;Name=WP_086163298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502774.1;locus_tag=D5F94_RS02180;product=DUF948 domain-containing protein;protein_id=WP_086163298.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 57177 57608 . + . ID=gene-D5F94_RS02185;Name=D5F94_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02185;old_locus_tag=D5F94_02185 NZ_QYTD01000003.1 Protein Homology CDS 57177 57608 . + 0 ID=cds-WP_000039971.1;Parent=gene-D5F94_RS02185;Dbxref=GenBank:WP_000039971.1;Name=WP_000039971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480620.1;locus_tag=D5F94_RS02185;product=YtxH domain-containing protein;protein_id=WP_000039971.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 57651 57926 . - . ID=gene-D5F94_RS02190;Name=D5F94_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02190;old_locus_tag=D5F94_02190 NZ_QYTD01000003.1 Protein Homology CDS 57651 57926 . - 0 ID=cds-WP_000097985.1;Parent=gene-D5F94_RS02190;Dbxref=GenBank:WP_000097985.1;Name=WP_000097985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097986.1;locus_tag=D5F94_RS02190;product=DUF3270 domain-containing protein;protein_id=WP_000097985.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 58267 59193 . + . ID=gene-D5F94_RS02195;Name=D5F94_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02195;old_locus_tag=D5F94_02195 NZ_QYTD01000003.1 Protein Homology CDS 58267 59193 . + 0 ID=cds-WP_016502775.1;Parent=gene-D5F94_RS02195;Dbxref=GenBank:WP_016502775.1;Name=WP_016502775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997850.1;locus_tag=D5F94_RS02195;product=peptidase U32 family protein;protein_id=WP_016502775.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 59323 60609 . + . ID=gene-D5F94_RS02200;Name=D5F94_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02200;old_locus_tag=D5F94_02200 NZ_QYTD01000003.1 Protein Homology CDS 59323 60609 . + 0 ID=cds-WP_016502776.1;Parent=gene-D5F94_RS02200;Dbxref=GenBank:WP_016502776.1;Name=WP_016502776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648447.1;locus_tag=D5F94_RS02200;product=peptidase U32 family protein;protein_id=WP_016502776.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 60736 60948 . + . ID=gene-D5F94_RS02205;Name=D5F94_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02205;old_locus_tag=D5F94_02205 NZ_QYTD01000003.1 Protein Homology CDS 60736 60948 . + 0 ID=cds-WP_001288869.1;Parent=gene-D5F94_RS02205;Dbxref=GenBank:WP_001288869.1;Name=WP_001288869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771805.1;locus_tag=D5F94_RS02205;product=YdbC family protein;protein_id=WP_001288869.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 61073 61870 . + . ID=gene-D5F94_RS02210;Name=D5F94_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02210;old_locus_tag=D5F94_02210 NZ_QYTD01000003.1 Protein Homology CDS 61073 61870 . + 0 ID=cds-WP_016480623.1;Parent=gene-D5F94_RS02210;Dbxref=GenBank:WP_016480623.1;Name=WP_016480623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000618018.1;locus_tag=D5F94_RS02210;product=tryptophan-rich sensory protein;protein_id=WP_016480623.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 61972 63312 . - . ID=gene-D5F94_RS02215;Name=D5F94_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02215;old_locus_tag=D5F94_02215 NZ_QYTD01000003.1 Protein Homology CDS 61972 63312 . - 0 ID=cds-WP_016480624.1;Parent=gene-D5F94_RS02215;Dbxref=GenBank:WP_016480624.1;Name=WP_016480624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001073016.1;locus_tag=D5F94_RS02215;product=Nramp family divalent metal transporter;protein_id=WP_016480624.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 63732 63846 . + . ID=id-NZ_QYTD01000003.1:63732..63846;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 64040 65149 . + . ID=gene-D5F94_RS02220;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=D5F94_RS02220;old_locus_tag=D5F94_02220 NZ_QYTD01000003.1 Protein Homology CDS 64040 65149 . + 0 ID=cds-WP_000975997.1;Parent=gene-D5F94_RS02220;Dbxref=GenBank:WP_000975997.1;Name=WP_000975997.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975996.1;locus_tag=D5F94_RS02220;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_000975997.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 65130 65780 . + . ID=gene-D5F94_RS02225;Name=D5F94_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02225;old_locus_tag=D5F94_02225 NZ_QYTD01000003.1 Protein Homology CDS 65130 65780 . + 0 ID=cds-WP_016480625.1;Parent=gene-D5F94_RS02225;Dbxref=GenBank:WP_016480625.1;Name=WP_016480625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493854.1;locus_tag=D5F94_RS02225;product=riboflavin synthase;protein_id=WP_016480625.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 65798 66991 . + . ID=gene-D5F94_RS02230;Name=D5F94_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02230;old_locus_tag=D5F94_02230 NZ_QYTD01000003.1 Protein Homology CDS 65798 66991 . + 0 ID=cds-WP_000885818.1;Parent=gene-D5F94_RS02230;Dbxref=GenBank:WP_000885818.1;Name=WP_000885818.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768533.1;locus_tag=D5F94_RS02230;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_000885818.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 67006 67476 . + . ID=gene-D5F94_RS02235;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=D5F94_RS02235;old_locus_tag=D5F94_02235 NZ_QYTD01000003.1 Protein Homology CDS 67006 67476 . + 0 ID=cds-WP_016502777.1;Parent=gene-D5F94_RS02235;Dbxref=GenBank:WP_016502777.1;Name=WP_016502777.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650902.1;locus_tag=D5F94_RS02235;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_016502777.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 67551 69041 . - . ID=gene-D5F94_RS02240;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=D5F94_RS02240;old_locus_tag=D5F94_02240 NZ_QYTD01000003.1 Protein Homology CDS 67551 69041 . - 0 ID=cds-WP_000070708.1;Parent=gene-D5F94_RS02240;Dbxref=GenBank:WP_000070708.1;Name=WP_000070708.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003055423.1;locus_tag=D5F94_RS02240;product=lysine--tRNA ligase;protein_id=WP_000070708.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 69216 70118 . + . ID=gene-D5F94_RS02245;Name=D5F94_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02245;old_locus_tag=D5F94_02245 NZ_QYTD01000003.1 Protein Homology CDS 69216 70118 . + 0 ID=cds-WP_000633104.1;Parent=gene-D5F94_RS02245;Dbxref=GenBank:WP_000633104.1;Name=WP_000633104.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633099.1;locus_tag=D5F94_RS02245;product=HAD family hydrolase;protein_id=WP_000633104.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 70154 70795 . - . ID=gene-D5F94_RS02250;Name=D5F94_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02250;old_locus_tag=D5F94_02250 NZ_QYTD01000003.1 Protein Homology CDS 70154 70795 . - 0 ID=cds-WP_000675286.1;Parent=gene-D5F94_RS02250;Dbxref=GenBank:WP_000675286.1;Name=WP_000675286.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675283.1;locus_tag=D5F94_RS02250;product=histidine phosphatase family protein;protein_id=WP_000675286.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 70817 71290 . - . ID=gene-D5F94_RS02255;Name=D5F94_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02255;old_locus_tag=D5F94_02255 NZ_QYTD01000003.1 Protein Homology CDS 70817 71290 . - 0 ID=cds-WP_000038843.1;Parent=gene-D5F94_RS02255;Dbxref=GenBank:WP_000038843.1;Name=WP_000038843.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058481.1;locus_tag=D5F94_RS02255;product=aminoacyl-tRNA deacylase;protein_id=WP_000038843.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 71585 72202 . + . ID=gene-D5F94_RS02260;Name=D5F94_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02260;old_locus_tag=D5F94_02260 NZ_QYTD01000003.1 Protein Homology CDS 71585 72202 . + 0 ID=cds-WP_016480629.1;Parent=gene-D5F94_RS02260;Dbxref=GenBank:WP_016480629.1;Name=WP_016480629.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000404311.1;locus_tag=D5F94_RS02260;product=SDR family oxidoreductase;protein_id=WP_016480629.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 72235 73083 . - . ID=gene-D5F94_RS02265;Name=D5F94_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02265;old_locus_tag=D5F94_02265 NZ_QYTD01000003.1 Protein Homology CDS 72235 73083 . - 0 ID=cds-WP_016480630.1;Parent=gene-D5F94_RS02265;Dbxref=GenBank:WP_016480630.1;Name=WP_016480630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254333.1;locus_tag=D5F94_RS02265;product=glycoside hydrolase family 25 protein;protein_id=WP_016480630.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 73240 73764 . + . ID=gene-D5F94_RS02270;Name=D5F94_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02270;old_locus_tag=D5F94_02270 NZ_QYTD01000003.1 Protein Homology CDS 73240 73764 . + 0 ID=cds-WP_000594806.1;Parent=gene-D5F94_RS02270;Dbxref=GenBank:WP_000594806.1;Name=WP_000594806.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771866.1;locus_tag=D5F94_RS02270;product=ECF transporter S component;protein_id=WP_000594806.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 73748 74137 . + . ID=gene-D5F94_RS02275;Name=D5F94_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02275;old_locus_tag=D5F94_02275 NZ_QYTD01000003.1 Protein Homology CDS 73748 74137 . + 0 ID=cds-WP_016502778.1;Parent=gene-D5F94_RS02275;Dbxref=GenBank:WP_016502778.1;Name=WP_016502778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759944.1;locus_tag=D5F94_RS02275;product=DUF4430 domain-containing protein;protein_id=WP_016502778.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 74196 75995 . - . ID=gene-D5F94_RS02280;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=D5F94_RS02280;old_locus_tag=D5F94_02280 NZ_QYTD01000003.1 Protein Homology CDS 74196 75995 . - 0 ID=cds-WP_016502779.1;Parent=gene-D5F94_RS02280;Dbxref=GenBank:WP_016502779.1;Name=WP_016502779.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647353.1;locus_tag=D5F94_RS02280;product=oligoendopeptidase F;protein_id=WP_016502779.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 76204 78999 . + . ID=gene-D5F94_RS02285;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=D5F94_RS02285;old_locus_tag=D5F94_02285 NZ_QYTD01000003.1 Protein Homology CDS 76204 78999 . + 0 ID=cds-WP_086163302.1;Parent=gene-D5F94_RS02285;Dbxref=GenBank:WP_086163302.1;Name=WP_086163302.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: protein motif:HMM:NF000584.1;locus_tag=D5F94_RS02285;product=phosphoenolpyruvate carboxylase;protein_id=WP_086163302.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 79105 80373 . + . ID=gene-D5F94_RS02290;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=D5F94_RS02290;old_locus_tag=D5F94_02290 NZ_QYTD01000003.1 Protein Homology CDS 79105 80373 . + 0 ID=cds-WP_000687014.1;Parent=gene-D5F94_RS02290;Dbxref=GenBank:WP_000687014.1;Name=WP_000687014.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687011.1;locus_tag=D5F94_RS02290;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_000687014.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 80725 81921 . + . ID=gene-D5F94_RS02295;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D5F94_RS02295;old_locus_tag=D5F94_02295 NZ_QYTD01000003.1 Protein Homology CDS 80725 81921 . + 0 ID=cds-WP_001040730.1;Parent=gene-D5F94_RS02295;Dbxref=GenBank:WP_001040730.1;Name=WP_001040730.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=D5F94_RS02295;product=elongation factor Tu;protein_id=WP_001040730.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 82102 82860 . + . ID=gene-D5F94_RS02300;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=D5F94_RS02300;old_locus_tag=D5F94_02300 NZ_QYTD01000003.1 Protein Homology CDS 82102 82860 . + 0 ID=cds-WP_000087883.1;Parent=gene-D5F94_RS02300;Dbxref=GenBank:WP_000087883.1;Name=WP_000087883.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087908.1;locus_tag=D5F94_RS02300;product=triose-phosphate isomerase;protein_id=WP_000087883.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 83037 83729 . + . ID=gene-D5F94_RS02305;Name=D5F94_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02305;old_locus_tag=D5F94_02305 NZ_QYTD01000003.1 Protein Homology CDS 83037 83729 . + 0 ID=cds-WP_000240135.1;Parent=gene-D5F94_RS02305;Dbxref=GenBank:WP_000240135.1;Name=WP_000240135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018029419.1;locus_tag=D5F94_RS02305;product=phosphoglycerate mutase;protein_id=WP_000240135.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 83858 85903 . + . ID=gene-D5F94_RS02310;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=D5F94_RS02310;old_locus_tag=D5F94_02310 NZ_QYTD01000003.1 Protein Homology CDS 83858 85903 . + 0 ID=cds-WP_086163303.1;Parent=gene-D5F94_RS02310;Dbxref=GenBank:WP_086163303.1;Name=WP_086163303.1;Ontology_term=GO:0009252,GO:0008658,GO:0071972;gbkey=CDS;gene=pbp2b;go_function=penicillin binding|0008658||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934659.1;locus_tag=D5F94_RS02310;product=penicillin-binding protein PBP2B;protein_id=WP_086163303.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 85918 86514 . + . ID=gene-D5F94_RS02315;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=D5F94_RS02315;old_locus_tag=D5F94_02315 NZ_QYTD01000003.1 Protein Homology CDS 85918 86514 . + 0 ID=cds-WP_000966735.1;Parent=gene-D5F94_RS02315;Dbxref=GenBank:WP_000966735.1;Name=WP_000966735.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=D5F94_RS02315;product=recombination mediator RecR;protein_id=WP_000966735.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 86655 87701 . + . ID=gene-D5F94_RS02320;Name=D5F94_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02320;old_locus_tag=D5F94_02320 NZ_QYTD01000003.1 Protein Homology CDS 86655 87701 . + 0 ID=cds-WP_000032510.1;Parent=gene-D5F94_RS02320;Dbxref=GenBank:WP_000032510.1;Name=WP_000032510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480637.1;locus_tag=D5F94_RS02320;product=D-alanine--D-alanine ligase;protein_id=WP_000032510.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 87848 89215 . + . ID=gene-D5F94_RS02325;Name=D5F94_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02325;old_locus_tag=D5F94_02325 NZ_QYTD01000003.1 Protein Homology CDS 87848 89215 . + 0 ID=cds-WP_000777522.1;Parent=gene-D5F94_RS02325;Dbxref=GenBank:WP_000777522.1;Name=WP_000777522.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647798.1;locus_tag=D5F94_RS02325;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000777522.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 89401 90621 . + . ID=gene-D5F94_RS02330;Name=D5F94_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02330;old_locus_tag=D5F94_02330 NZ_QYTD01000003.1 Protein Homology CDS 89401 90621 . + 0 ID=cds-WP_000793484.1;Parent=gene-D5F94_RS02330;Dbxref=GenBank:WP_000793484.1;Name=WP_000793484.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793481.1;locus_tag=D5F94_RS02330;product=L-lactate MFS transporter;protein_id=WP_000793484.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 90749 91435 . + . ID=gene-D5F94_RS02335;Name=D5F94_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02335;old_locus_tag=D5F94_02335 NZ_QYTD01000003.1 Protein Homology CDS 90749 91435 . + 0 ID=cds-WP_016502784.1;Parent=gene-D5F94_RS02335;Dbxref=GenBank:WP_016502784.1;Name=WP_016502784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569015.1;locus_tag=D5F94_RS02335;product=YwaF family protein;protein_id=WP_016502784.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 91615 93153 . + . ID=gene-D5F94_RS02340;Name=D5F94_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02340;old_locus_tag=D5F94_02340 NZ_QYTD01000003.1 Protein Homology CDS 91615 93153 . + 0 ID=cds-WP_086163304.1;Parent=gene-D5F94_RS02340;Dbxref=GenBank:WP_086163304.1;Name=WP_086163304.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043078.1;locus_tag=D5F94_RS02340;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_086163304.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 93330 94874 . + . ID=gene-D5F94_RS02345;Name=D5F94_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02345;old_locus_tag=D5F94_02345 NZ_QYTD01000003.1 Protein Homology CDS 93330 94874 . + 0 ID=cds-WP_016502786.1;Parent=gene-D5F94_RS02345;Dbxref=GenBank:WP_016502786.1;Name=WP_016502786.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=D5F94_RS02345;product=peptide chain release factor 3;protein_id=WP_016502786.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 94960 95340 . + . ID=gene-D5F94_RS02350;Name=D5F94_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02350;old_locus_tag=D5F94_02350 NZ_QYTD01000003.1 Protein Homology CDS 94960 95340 . + 0 ID=cds-WP_016502787.1;Parent=gene-D5F94_RS02350;Dbxref=GenBank:WP_016502787.1;Name=WP_016502787.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502787.1;locus_tag=D5F94_RS02350;product=PH domain-containing protein;protein_id=WP_016502787.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 95461 96194 . + . ID=gene-D5F94_RS02355;Name=D5F94_RS02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS02355;old_locus_tag=D5F94_02355;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 95461 96194 . + 0 ID=cds-D5F94_RS02355;Parent=gene-D5F94_RS02355;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480643.1;locus_tag=D5F94_RS02355;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 96187 96849 . + . ID=gene-D5F94_RS02360;Name=D5F94_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02360;old_locus_tag=D5F94_02360 NZ_QYTD01000003.1 Protein Homology CDS 96187 96849 . + 0 ID=cds-WP_000565395.1;Parent=gene-D5F94_RS02360;Dbxref=GenBank:WP_000565395.1;Name=WP_000565395.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644638.1;locus_tag=D5F94_RS02360;product=methionine ABC transporter permease;protein_id=WP_000565395.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 96865 97695 . + . ID=gene-D5F94_RS02365;Name=D5F94_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02365;old_locus_tag=D5F94_02365 NZ_QYTD01000003.1 Protein Homology CDS 96865 97695 . + 0 ID=cds-WP_000735504.1;Parent=gene-D5F94_RS02365;Dbxref=GenBank:WP_000735504.1;Name=WP_000735504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735506.1;locus_tag=D5F94_RS02365;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000735504.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 97930 99516 . + . ID=gene-D5F94_RS02370;Name=D5F94_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02370;old_locus_tag=D5F94_02370 NZ_QYTD01000003.1 Protein Homology CDS 97930 99516 . + 0 ID=cds-WP_016502789.1;Parent=gene-D5F94_RS02370;Dbxref=GenBank:WP_016502789.1;Name=WP_016502789.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673092.1;locus_tag=D5F94_RS02370;product=DEAD/DEAH box helicase;protein_id=WP_016502789.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 99701 99967 . - . ID=gene-D5F94_RS02375;Name=D5F94_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02375;old_locus_tag=D5F94_02375 NZ_QYTD01000003.1 Protein Homology CDS 99701 99967 . - 0 ID=cds-WP_000598736.1;Parent=gene-D5F94_RS02375;Dbxref=GenBank:WP_000598736.1;Name=WP_000598736.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598735.1;locus_tag=D5F94_RS02375;product=GIY-YIG nuclease family protein;protein_id=WP_000598736.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 99960 100724 . - . ID=gene-D5F94_RS02380;Name=D5F94_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02380;old_locus_tag=D5F94_02380 NZ_QYTD01000003.1 Protein Homology CDS 99960 100724 . - 0 ID=cds-WP_000567423.1;Parent=gene-D5F94_RS02380;Dbxref=GenBank:WP_000567423.1;Name=WP_000567423.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567423.1;locus_tag=D5F94_RS02380;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_000567423.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 100859 101599 . + . ID=gene-D5F94_RS02385;Name=D5F94_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02385;old_locus_tag=D5F94_02385 NZ_QYTD01000003.1 Protein Homology CDS 100859 101599 . + 0 ID=cds-WP_124749355.1;Parent=gene-D5F94_RS02385;Dbxref=GenBank:WP_124749355.1;Name=WP_124749355.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650649.1;locus_tag=D5F94_RS02385;product=lysophospholipid acyltransferase family protein;protein_id=WP_124749355.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 101699 102352 . + . ID=gene-D5F94_RS02390;Name=D5F94_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02390;old_locus_tag=D5F94_02390 NZ_QYTD01000003.1 Protein Homology CDS 101699 102352 . + 0 ID=cds-WP_000461740.1;Parent=gene-D5F94_RS02390;Dbxref=GenBank:WP_000461740.1;Name=WP_000461740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461745.1;locus_tag=D5F94_RS02390;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000461740.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 102336 104573 . + . ID=gene-D5F94_RS02395;Name=D5F94_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02395;old_locus_tag=D5F94_02395 NZ_QYTD01000003.1 Protein Homology CDS 102336 104573 . + 0 ID=cds-WP_124749194.1;Parent=gene-D5F94_RS02395;Dbxref=GenBank:WP_124749194.1;Name=WP_124749194.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000939917.1;locus_tag=D5F94_RS02395;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_124749194.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 104699 105508 . + . ID=gene-D5F94_RS02400;Name=D5F94_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02400;old_locus_tag=D5F94_02400 NZ_QYTD01000003.1 Protein Homology CDS 104699 105508 . + 0 ID=cds-WP_124749356.1;Parent=gene-D5F94_RS02400;Dbxref=GenBank:WP_124749356.1;Name=WP_124749356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153214.1;locus_tag=D5F94_RS02400;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_124749356.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 105519 106463 . + . ID=gene-D5F94_RS02405;Name=D5F94_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02405;old_locus_tag=D5F94_02405 NZ_QYTD01000003.1 Protein Homology CDS 105519 106463 . + 0 ID=cds-WP_000200830.1;Parent=gene-D5F94_RS02405;Dbxref=GenBank:WP_000200830.1;Name=WP_000200830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754201.1;locus_tag=D5F94_RS02405;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000200830.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 106522 107514 . - . ID=gene-D5F94_RS02410;Name=D5F94_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02410;old_locus_tag=D5F94_02410 NZ_QYTD01000003.1 Protein Homology CDS 106522 107514 . - 0 ID=cds-WP_000800998.1;Parent=gene-D5F94_RS02410;Dbxref=GenBank:WP_000800998.1;Name=WP_000800998.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647477.1;locus_tag=D5F94_RS02410;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_000800998.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 107690 108418 . + . ID=gene-D5F94_RS02415;Name=D5F94_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02415;old_locus_tag=D5F94_02415 NZ_QYTD01000003.1 Protein Homology CDS 107690 108418 . + 0 ID=cds-WP_000468966.1;Parent=gene-D5F94_RS02415;Dbxref=GenBank:WP_000468966.1;Name=WP_000468966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468969.1;locus_tag=D5F94_RS02415;product=methyltransferase domain-containing protein;protein_id=WP_000468966.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 108472 109509 . + . ID=gene-D5F94_RS02420;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=D5F94_RS02420;old_locus_tag=D5F94_02420 NZ_QYTD01000003.1 Protein Homology CDS 108472 109509 . + 0 ID=cds-WP_000560292.1;Parent=gene-D5F94_RS02420;Dbxref=GenBank:WP_000560292.1;Name=WP_000560292.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560289.1;locus_tag=D5F94_RS02420;product=DNA polymerase III subunit delta;protein_id=WP_000560292.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 109589 110197 . + . ID=gene-D5F94_RS02425;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=D5F94_RS02425;old_locus_tag=D5F94_02425 NZ_QYTD01000003.1 Protein Homology CDS 109589 110197 . + 0 ID=cds-WP_000974719.1;Parent=gene-D5F94_RS02425;Dbxref=GenBank:WP_000974719.1;Name=WP_000974719.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974722.1;locus_tag=D5F94_RS02425;product=superoxide dismutase SodA;protein_id=WP_000974719.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 110535 111386 . + . ID=gene-D5F94_RS02430;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=D5F94_RS02430;old_locus_tag=D5F94_02430 NZ_QYTD01000003.1 Protein Homology CDS 110535 111386 . + 0 ID=cds-WP_000584608.1;Parent=gene-D5F94_RS02430;Dbxref=GenBank:WP_000584608.1;Name=WP_000584608.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=licT;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649835.1;locus_tag=D5F94_RS02430;product=BglG family transcription antiterminator LicT;protein_id=WP_000584608.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 111379 113247 . + . ID=gene-D5F94_RS02435;Name=D5F94_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02435;old_locus_tag=D5F94_02435 NZ_QYTD01000003.1 Protein Homology CDS 111379 113247 . + 0 ID=cds-WP_000170543.1;Parent=gene-D5F94_RS02435;Dbxref=GenBank:WP_000170543.1;Name=WP_000170543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170539.1;locus_tag=D5F94_RS02435;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=WP_000170543.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 113264 114691 . + . ID=gene-D5F94_RS02440;Name=D5F94_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02440;old_locus_tag=D5F94_02440 NZ_QYTD01000003.1 Protein Homology CDS 113264 114691 . + 0 ID=cds-WP_000215675.1;Parent=gene-D5F94_RS02440;Dbxref=GenBank:WP_000215675.1;Name=WP_000215675.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650878.1;locus_tag=D5F94_RS02440;product=glycoside hydrolase family 1 protein;protein_id=WP_000215675.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 114760 115854 . - . ID=gene-D5F94_RS02445;Name=D5F94_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02445;old_locus_tag=D5F94_02445 NZ_QYTD01000003.1 Protein Homology CDS 114760 115854 . - 0 ID=cds-WP_000776696.1;Parent=gene-D5F94_RS02445;Dbxref=GenBank:WP_000776696.1;Name=WP_000776696.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776693.1;locus_tag=D5F94_RS02445;product=CdaR family transcriptional regulator;protein_id=WP_000776696.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 116021 117163 . + . ID=gene-D5F94_RS02450;Name=D5F94_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02450;old_locus_tag=D5F94_02450 NZ_QYTD01000003.1 Protein Homology CDS 116021 117163 . + 0 ID=cds-WP_000869908.1;Parent=gene-D5F94_RS02450;Dbxref=GenBank:WP_000869908.1;Name=WP_000869908.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869902.1;locus_tag=D5F94_RS02450;product=glycerate kinase family protein;protein_id=WP_000869908.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 117188 118444 . + . ID=gene-D5F94_RS02455;Name=D5F94_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02455;old_locus_tag=D5F94_02455 NZ_QYTD01000003.1 Protein Homology CDS 117188 118444 . + 0 ID=cds-WP_000388411.1;Parent=gene-D5F94_RS02455;Dbxref=GenBank:WP_000388411.1;Name=WP_000388411.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480657.1;locus_tag=D5F94_RS02455;product=GntP family permease;protein_id=WP_000388411.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 118545 119609 . + . ID=gene-D5F94_RS02460;Name=D5F94_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02460;old_locus_tag=D5F94_02460 NZ_QYTD01000003.1 Protein Homology CDS 118545 119609 . + 0 ID=cds-WP_000814864.1;Parent=gene-D5F94_RS02460;Dbxref=GenBank:WP_000814864.1;Name=WP_000814864.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643861.1;locus_tag=D5F94_RS02460;product=serine hydrolase;protein_id=WP_000814864.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 119664 120107 . - . ID=gene-D5F94_RS02465;Name=D5F94_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02465;old_locus_tag=D5F94_02465 NZ_QYTD01000003.1 Protein Homology CDS 119664 120107 . - 0 ID=cds-WP_000606029.1;Parent=gene-D5F94_RS02465;Dbxref=GenBank:WP_000606029.1;Name=WP_000606029.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502799.1;locus_tag=D5F94_RS02465;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000606029.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 120188 121216 . - . ID=gene-D5F94_RS02470;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=D5F94_RS02470;old_locus_tag=D5F94_02470 NZ_QYTD01000003.1 Protein Homology CDS 120188 121216 . - 0 ID=cds-WP_001095273.1;Parent=gene-D5F94_RS02470;Dbxref=GenBank:WP_001095273.1;Name=WP_001095273.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646165.1;locus_tag=D5F94_RS02470;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001095273.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 121369 122049 . + . ID=gene-D5F94_RS02475;Name=D5F94_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02475;old_locus_tag=D5F94_02475 NZ_QYTD01000003.1 Protein Homology CDS 121369 122049 . + 0 ID=cds-WP_000656582.1;Parent=gene-D5F94_RS02475;Dbxref=GenBank:WP_000656582.1;Name=WP_000656582.1;Ontology_term=GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656576.1;locus_tag=D5F94_RS02475;product=VIT1/CCC1 transporter family protein;protein_id=WP_000656582.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 122200 122901 . + . ID=gene-D5F94_RS02480;Name=D5F94_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02480;old_locus_tag=D5F94_02480 NZ_QYTD01000003.1 Protein Homology CDS 122200 122901 . + 0 ID=cds-WP_001263956.1;Parent=gene-D5F94_RS02480;Dbxref=GenBank:WP_001263956.1;Name=WP_001263956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263956.1;locus_tag=D5F94_RS02480;product=glucosamine-6-phosphate deaminase;protein_id=WP_001263956.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 122973 123929 . - . ID=gene-D5F94_RS02485;Name=D5F94_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02485;old_locus_tag=D5F94_02485 NZ_QYTD01000003.1 Protein Homology CDS 122973 123929 . - 0 ID=cds-WP_000523788.1;Parent=gene-D5F94_RS02485;Dbxref=GenBank:WP_000523788.1;Name=WP_000523788.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523788.1;locus_tag=D5F94_RS02485;product=glutathione S-transferase family protein;protein_id=WP_000523788.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 124025 124744 . + . ID=gene-D5F94_RS02490;Name=D5F94_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02490;old_locus_tag=D5F94_02490 NZ_QYTD01000003.1 Protein Homology CDS 124025 124744 . + 0 ID=cds-WP_001234956.1;Parent=gene-D5F94_RS02490;Dbxref=GenBank:WP_001234956.1;Name=WP_001234956.1;Ontology_term=GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234955.1;locus_tag=D5F94_RS02490;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_001234956.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 124817 125968 . + . ID=gene-D5F94_RS02500;Name=D5F94_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02500;old_locus_tag=D5F94_02500 NZ_QYTD01000003.1 Protein Homology CDS 124817 125968 . + 0 ID=cds-WP_001086200.1;Parent=gene-D5F94_RS02500;Dbxref=GenBank:WP_001086200.1;Name=WP_001086200.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771524.1;locus_tag=D5F94_RS02500;product=MFS transporter;protein_id=WP_001086200.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 126020 126967 . + . ID=gene-D5F94_RS02505;Name=D5F94_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02505;old_locus_tag=D5F94_02505 NZ_QYTD01000003.1 Protein Homology CDS 126020 126967 . + 0 ID=cds-WP_000903642.1;Parent=gene-D5F94_RS02505;Dbxref=GenBank:WP_000903642.1;Name=WP_000903642.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000903651.1;locus_tag=D5F94_RS02505;product=competence protein CoiA;protein_id=WP_000903642.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 126983 128788 . + . ID=gene-D5F94_RS02510;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=D5F94_RS02510;old_locus_tag=D5F94_02510 NZ_QYTD01000003.1 Protein Homology CDS 126983 128788 . + 0 ID=cds-WP_001282902.1;Parent=gene-D5F94_RS02510;Dbxref=GenBank:WP_001282902.1;Name=WP_001282902.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282903.1;locus_tag=D5F94_RS02510;product=oligoendopeptidase F;protein_id=WP_001282902.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 128983 129609 . + . ID=gene-D5F94_RS02515;Name=D5F94_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02515;old_locus_tag=D5F94_02515 NZ_QYTD01000003.1 Protein Homology CDS 128983 129609 . + 0 ID=cds-WP_000736935.1;Parent=gene-D5F94_RS02515;Dbxref=GenBank:WP_000736935.1;Name=WP_000736935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771772.1;locus_tag=D5F94_RS02515;product=HAD hydrolase-like protein;protein_id=WP_000736935.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 129683 130390 . + . ID=gene-D5F94_RS02520;Name=D5F94_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02520;old_locus_tag=D5F94_02520 NZ_QYTD01000003.1 Protein Homology CDS 129683 130390 . + 0 ID=cds-WP_000250853.1;Parent=gene-D5F94_RS02520;Dbxref=GenBank:WP_000250853.1;Name=WP_000250853.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650688.1;locus_tag=D5F94_RS02520;product=O-methyltransferase;protein_id=WP_000250853.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 130451 131380 . + . ID=gene-D5F94_RS02525;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=D5F94_RS02525;old_locus_tag=D5F94_02525 NZ_QYTD01000003.1 Protein Homology CDS 130451 131380 . + 0 ID=cds-WP_000857822.1;Parent=gene-D5F94_RS02525;Dbxref=GenBank:WP_000857822.1;Name=WP_000857822.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857824.1;locus_tag=D5F94_RS02525;product=peptidylprolyl isomerase PrsA;protein_id=WP_000857822.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 131622 132107 . + . ID=gene-D5F94_RS02530;Name=D5F94_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02530;old_locus_tag=D5F94_02530 NZ_QYTD01000003.1 Protein Homology CDS 131622 132107 . + 0 ID=cds-WP_000190196.1;Parent=gene-D5F94_RS02530;Dbxref=GenBank:WP_000190196.1;Name=WP_000190196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767250.1;locus_tag=D5F94_RS02530;product=LURP-one-related/scramblase family protein;protein_id=WP_000190196.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 132123 134741 . + . ID=gene-D5F94_RS02535;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=D5F94_RS02535;old_locus_tag=D5F94_02535 NZ_QYTD01000003.1 Protein Homology CDS 132123 134741 . + 0 ID=cds-WP_000661557.1;Parent=gene-D5F94_RS02535;Dbxref=GenBank:WP_000661557.1;Name=WP_000661557.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661542.1;locus_tag=D5F94_RS02535;product=alanine--tRNA ligase;protein_id=WP_000661557.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 134823 135539 . + . ID=gene-D5F94_RS02540;Name=D5F94_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02540;old_locus_tag=D5F94_02540 NZ_QYTD01000003.1 Protein Homology CDS 134823 135539 . + 0 ID=cds-WP_000232924.1;Parent=gene-D5F94_RS02540;Dbxref=GenBank:WP_000232924.1;Name=WP_000232924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232920.1;locus_tag=D5F94_RS02540;product=DUF554 domain-containing protein;protein_id=WP_000232924.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 135627 136445 . + . ID=gene-D5F94_RS02545;Name=D5F94_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02545;old_locus_tag=D5F94_02545 NZ_QYTD01000003.1 Protein Homology CDS 135627 136445 . + 0 ID=cds-WP_001050371.1;Parent=gene-D5F94_RS02545;Dbxref=GenBank:WP_001050371.1;Name=WP_001050371.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050370.1;locus_tag=D5F94_RS02545;product=glycosyltransferase family 8 protein;protein_id=WP_001050371.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 136646 136833 . + . ID=gene-D5F94_RS10615;Name=D5F94_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10615;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 136646 136833 . + 0 ID=cds-D5F94_RS10615;Parent=gene-D5F94_RS10615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711345.1;locus_tag=D5F94_RS10615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 136866 137159 . + . ID=gene-D5F94_RS02550;Name=D5F94_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02550;old_locus_tag=D5F94_02550 NZ_QYTD01000003.1 Protein Homology CDS 136866 137159 . + 0 ID=cds-WP_000245558.1;Parent=gene-D5F94_RS02550;Dbxref=GenBank:WP_000245558.1;Name=WP_000245558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000245557.1;locus_tag=D5F94_RS02550;product=hypothetical protein;protein_id=WP_000245558.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 137204 137419 . + . ID=gene-D5F94_RS02555;Name=D5F94_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02555;old_locus_tag=D5F94_02555 NZ_QYTD01000003.1 Protein Homology CDS 137204 137419 . + 0 ID=cds-WP_000522957.1;Parent=gene-D5F94_RS02555;Dbxref=GenBank:WP_000522957.1;Name=WP_000522957.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522956.1;locus_tag=D5F94_RS02555;product=helix-turn-helix transcriptional regulator;protein_id=WP_000522957.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 137422 138180 . + . ID=gene-D5F94_RS02560;Name=D5F94_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02560;old_locus_tag=D5F94_02560 NZ_QYTD01000003.1 Protein Homology CDS 137422 138180 . + 0 ID=cds-WP_001868051.1;Parent=gene-D5F94_RS02560;Dbxref=GenBank:WP_001868051.1;Name=WP_001868051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480667.1;locus_tag=D5F94_RS02560;product=DUF3169 family protein;protein_id=WP_001868051.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 138265 138828 . - . ID=gene-D5F94_RS02565;Name=thiT;gbkey=Gene;gene=thiT;gene_biotype=protein_coding;locus_tag=D5F94_RS02565;old_locus_tag=D5F94_02565 NZ_QYTD01000003.1 Protein Homology CDS 138265 138828 . - 0 ID=cds-WP_000042136.1;Parent=gene-D5F94_RS02565;Dbxref=GenBank:WP_000042136.1;Name=WP_000042136.1;Ontology_term=GO:0015888,GO:0015234;gbkey=CDS;gene=thiT;go_function=thiamine transmembrane transporter activity|0015234||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042138.1;locus_tag=D5F94_RS02565;product=energy-coupled thiamine transporter ThiT;protein_id=WP_000042136.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 138886 138984 . - . ID=id-NZ_QYTD01000003.1:138886..138984;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 139069 140028 . - . ID=gene-D5F94_RS02570;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D5F94_RS02570;old_locus_tag=D5F94_02570 NZ_QYTD01000003.1 Protein Homology CDS 139069 140028 . - 0 ID=cds-WP_000214845.1;Parent=gene-D5F94_RS02570;Dbxref=GenBank:WP_000214845.1;Name=WP_000214845.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646384.1;locus_tag=D5F94_RS02570;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000214845.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 140231 142390 . - . ID=gene-D5F94_RS02575;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D5F94_RS02575;old_locus_tag=D5F94_02575 NZ_QYTD01000003.1 Protein Homology CDS 140231 142390 . - 0 ID=cds-WP_000053862.1;Parent=gene-D5F94_RS02575;Dbxref=GenBank:WP_000053862.1;Name=WP_000053862.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053857.1;locus_tag=D5F94_RS02575;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000053862.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 142468 142692 . - . ID=gene-D5F94_RS02580;Name=D5F94_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02580;old_locus_tag=D5F94_02580 NZ_QYTD01000003.1 Protein Homology CDS 142468 142692 . - 0 ID=cds-WP_000719060.1;Parent=gene-D5F94_RS02580;Dbxref=GenBank:WP_000719060.1;Name=WP_000719060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719060.1;locus_tag=D5F94_RS02580;product=redoxin NrdH;protein_id=WP_000719060.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 143075 143338 . + . ID=gene-D5F94_RS02585;Name=D5F94_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02585;old_locus_tag=D5F94_02585 NZ_QYTD01000003.1 Protein Homology CDS 143075 143338 . + 0 ID=cds-WP_000146945.1;Parent=gene-D5F94_RS02585;Dbxref=GenBank:WP_000146945.1;Name=WP_000146945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=D5F94_RS02585;product=phosphocarrier protein HPr;protein_id=WP_000146945.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 143343 145076 . + . ID=gene-D5F94_RS02590;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=D5F94_RS02590;old_locus_tag=D5F94_02590 NZ_QYTD01000003.1 Protein Homology CDS 143343 145076 . + 0 ID=cds-WP_000138153.1;Parent=gene-D5F94_RS02590;Dbxref=GenBank:WP_000138153.1;Name=WP_000138153.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294264.1;locus_tag=D5F94_RS02590;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000138153.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 145227 146654 . + . ID=gene-D5F94_RS02595;Name=D5F94_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02595;old_locus_tag=D5F94_02595 NZ_QYTD01000003.1 Protein Homology CDS 145227 146654 . + 0 ID=cds-WP_000159911.1;Parent=gene-D5F94_RS02595;Dbxref=GenBank:WP_000159911.1;Name=WP_000159911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646385.1;locus_tag=D5F94_RS02595;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000159911.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 146794 148047 . + . ID=gene-D5F94_RS02600;Name=D5F94_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02600;old_locus_tag=D5F94_02600 NZ_QYTD01000003.1 Protein Homology CDS 146794 148047 . + 0 ID=cds-WP_000733379.1;Parent=gene-D5F94_RS02600;Dbxref=GenBank:WP_000733379.1;Name=WP_000733379.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733367.1;locus_tag=D5F94_RS02600;product=polysaccharide deacetylase family protein;protein_id=WP_000733379.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 148080 149162 . - . ID=gene-D5F94_RS02605;Name=D5F94_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02605;old_locus_tag=D5F94_02605 NZ_QYTD01000003.1 Protein Homology CDS 148080 149162 . - 0 ID=cds-WP_000628861.1;Parent=gene-D5F94_RS02605;Dbxref=GenBank:WP_000628861.1;Name=WP_000628861.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058504.1;locus_tag=D5F94_RS02605;product=DEAD/DEAH box helicase;protein_id=WP_000628861.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 149307 149936 . + . ID=gene-D5F94_RS02610;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=D5F94_RS02610;old_locus_tag=D5F94_02610 NZ_QYTD01000003.1 Protein Homology CDS 149307 149936 . + 0 ID=cds-WP_001227823.1;Parent=gene-D5F94_RS02610;Dbxref=GenBank:WP_001227823.1;Name=WP_001227823.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227823.1;locus_tag=D5F94_RS02610;product=uridine kinase;protein_id=WP_001227823.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 150023 150520 . + . ID=gene-D5F94_RS02615;Name=D5F94_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02615;old_locus_tag=D5F94_02615 NZ_QYTD01000003.1 Protein Homology CDS 150023 150520 . + 0 ID=cds-WP_001043210.1;Parent=gene-D5F94_RS02615;Dbxref=GenBank:WP_001043210.1;Name=WP_001043210.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502809.1;locus_tag=D5F94_RS02615;product=GAF domain-containing protein;protein_id=WP_001043210.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 150520 152184 . + . ID=gene-D5F94_RS02620;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=D5F94_RS02620;old_locus_tag=D5F94_02620 NZ_QYTD01000003.1 Protein Homology CDS 150520 152184 . + 0 ID=cds-WP_124749357.1;Parent=gene-D5F94_RS02620;Dbxref=GenBank:WP_124749357.1;Name=WP_124749357.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480673.1;locus_tag=D5F94_RS02620;product=DNA polymerase III subunit gamma/tau;protein_id=WP_124749357.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 152273 152467 . + . ID=gene-D5F94_RS02625;Name=D5F94_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02625;old_locus_tag=D5F94_02625 NZ_QYTD01000003.1 Protein Homology CDS 152273 152467 . + 0 ID=cds-WP_000166926.1;Parent=gene-D5F94_RS02625;Dbxref=GenBank:WP_000166926.1;Name=WP_000166926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631927.1;locus_tag=D5F94_RS02625;product=DUF3272 domain-containing protein;protein_id=WP_000166926.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 152448 153383 . - . ID=gene-D5F94_RS02630;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=D5F94_RS02630;old_locus_tag=D5F94_02630 NZ_QYTD01000003.1 Protein Homology CDS 152448 153383 . - 0 ID=cds-WP_001872319.1;Parent=gene-D5F94_RS02630;Dbxref=GenBank:WP_001872319.1;Name=WP_001872319.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650903.1;locus_tag=D5F94_RS02630;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_001872319.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 153568 154764 . + . ID=gene-D5F94_RS02635;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=D5F94_RS02635;old_locus_tag=D5F94_02635 NZ_QYTD01000003.1 Protein Homology CDS 153568 154764 . + 0 ID=cds-WP_000003955.1;Parent=gene-D5F94_RS02635;Dbxref=GenBank:WP_000003955.1;Name=WP_000003955.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631929.1;locus_tag=D5F94_RS02635;product=methionine adenosyltransferase;protein_id=WP_000003955.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 154751 155026 . + . ID=gene-D5F94_RS02640;Name=D5F94_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02640;old_locus_tag=D5F94_02640 NZ_QYTD01000003.1 Protein Homology CDS 154751 155026 . + 0 ID=cds-WP_000880721.1;Parent=gene-D5F94_RS02640;Dbxref=GenBank:WP_000880721.1;Name=WP_000880721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880717.1;locus_tag=D5F94_RS02640;product=hypothetical protein;protein_id=WP_000880721.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 155285 157546 . + . ID=gene-D5F94_RS02645;Name=D5F94_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02645;old_locus_tag=D5F94_02645 NZ_QYTD01000003.1 Protein Homology CDS 155285 157546 . + 0 ID=cds-WP_124749358.1;Parent=gene-D5F94_RS02645;Dbxref=GenBank:WP_124749358.1;Name=WP_124749358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743863.1;locus_tag=D5F94_RS02645;product=coagulase domain-containing protein;protein_id=WP_124749358.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 157613 158158 . + . ID=gene-D5F94_RS02650;Name=D5F94_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02650;old_locus_tag=D5F94_02650 NZ_QYTD01000003.1 Protein Homology CDS 157613 158158 . + 0 ID=cds-WP_000724543.1;Parent=gene-D5F94_RS02650;Dbxref=GenBank:WP_000724543.1;Name=WP_000724543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724544.1;locus_tag=D5F94_RS02650;product=GA module-containing protein;protein_id=WP_000724543.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 158309 158398 . + . ID=id-NZ_QYTD01000003.1:158309..158398;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 158554 159120 . + . ID=gene-D5F94_RS02655;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=D5F94_RS02655;old_locus_tag=D5F94_02655 NZ_QYTD01000003.1 Protein Homology CDS 158554 159120 . + 0 ID=cds-WP_000181409.1;Parent=gene-D5F94_RS02655;Dbxref=GenBank:WP_000181409.1;Name=WP_000181409.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181415.1;locus_tag=D5F94_RS02655;product=energy coupling factor transporter S component ThiW;protein_id=WP_000181409.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 159117 159671 . + . ID=gene-D5F94_RS02660;Name=D5F94_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02660;old_locus_tag=D5F94_02660 NZ_QYTD01000003.1 Protein Homology CDS 159117 159671 . + 0 ID=cds-WP_000777526.1;Parent=gene-D5F94_RS02660;Dbxref=GenBank:WP_000777526.1;Name=WP_000777526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649536.1;locus_tag=D5F94_RS02660;product=ECF transporter S component;protein_id=WP_000777526.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 159675 160961 . + . ID=gene-D5F94_RS02665;Name=D5F94_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02665;old_locus_tag=D5F94_02665 NZ_QYTD01000003.1 Protein Homology CDS 159675 160961 . + 0 ID=cds-WP_000953593.1;Parent=gene-D5F94_RS02665;Dbxref=GenBank:WP_000953593.1;Name=WP_000953593.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953609.1;locus_tag=D5F94_RS02665;product=ATP-binding cassette domain-containing protein;protein_id=WP_000953593.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 160949 161617 . + . ID=gene-D5F94_RS02670;Name=D5F94_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02670;old_locus_tag=D5F94_02670 NZ_QYTD01000003.1 Protein Homology CDS 160949 161617 . + 0 ID=cds-WP_000482627.1;Parent=gene-D5F94_RS02670;Dbxref=GenBank:WP_000482627.1;Name=WP_000482627.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480683.1;locus_tag=D5F94_RS02670;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_000482627.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 161701 162382 . + . ID=gene-D5F94_RS02675;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=pseudogene;locus_tag=D5F94_RS02675;old_locus_tag=D5F94_02675;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 161701 162382 . + 0 ID=cds-D5F94_RS02675;Parent=gene-D5F94_RS02675;Note=frameshifted;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502813.1;locus_tag=D5F94_RS02675;product=thiaminase II;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 162384 163181 . + . ID=gene-D5F94_RS02680;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=D5F94_RS02680;old_locus_tag=D5F94_02680 NZ_QYTD01000003.1 Protein Homology CDS 162384 163181 . + 0 ID=cds-WP_000221577.1;Parent=gene-D5F94_RS02680;Dbxref=GenBank:WP_000221577.1;Name=WP_000221577.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221574.1;locus_tag=D5F94_RS02680;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000221577.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 163183 163953 . + . ID=gene-D5F94_RS02685;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=D5F94_RS02685;old_locus_tag=D5F94_02685 NZ_QYTD01000003.1 Protein Homology CDS 163183 163953 . + 0 ID=cds-WP_000280417.1;Parent=gene-D5F94_RS02685;Dbxref=GenBank:WP_000280417.1;Name=WP_000280417.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502814.1;locus_tag=D5F94_RS02685;product=hydroxyethylthiazole kinase;protein_id=WP_000280417.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 163967 164638 . + . ID=gene-D5F94_RS02690;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=D5F94_RS02690;old_locus_tag=D5F94_02690 NZ_QYTD01000003.1 Protein Homology CDS 163967 164638 . + 0 ID=cds-WP_000655661.1;Parent=gene-D5F94_RS02690;Dbxref=GenBank:WP_000655661.1;Name=WP_000655661.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001904425.1;locus_tag=D5F94_RS02690;product=thiamine phosphate synthase;protein_id=WP_000655661.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 164765 166024 . + . ID=gene-D5F94_RS02695;Name=D5F94_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02695;old_locus_tag=D5F94_02695 NZ_QYTD01000003.1 Protein Homology CDS 164765 166024 . + 0 ID=cds-WP_001226242.1;Parent=gene-D5F94_RS02695;Dbxref=GenBank:WP_001226242.1;Name=WP_001226242.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226236.1;locus_tag=D5F94_RS02695;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_001226242.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 166126 166680 . + . ID=gene-D5F94_RS02700;Name=D5F94_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02700;old_locus_tag=D5F94_02700 NZ_QYTD01000003.1 Protein Homology CDS 166126 166680 . + 0 ID=cds-WP_000355953.1;Parent=gene-D5F94_RS02700;Dbxref=GenBank:WP_000355953.1;Name=WP_000355953.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355949.1;locus_tag=D5F94_RS02700;product=GNAT family N-acetyltransferase;protein_id=WP_000355953.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 166673 167956 . + . ID=gene-D5F94_RS02705;Name=spxR;gbkey=Gene;gene=spxR;gene_biotype=protein_coding;locus_tag=D5F94_RS02705;old_locus_tag=D5F94_02705 NZ_QYTD01000003.1 Protein Homology CDS 166673 167956 . + 0 ID=cds-WP_000033788.1;Parent=gene-D5F94_RS02705;Dbxref=GenBank:WP_000033788.1;Name=WP_000033788.1;gbkey=CDS;gene=spxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033790.1;locus_tag=D5F94_RS02705;product=CBS-HotDog domain-containing transcription factor SpxR;protein_id=WP_000033788.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 167979 168839 . + . ID=gene-D5F94_RS02710;Name=D5F94_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02710;old_locus_tag=D5F94_02710 NZ_QYTD01000003.1 Protein Homology CDS 167979 168839 . + 0 ID=cds-WP_000631567.1;Parent=gene-D5F94_RS02710;Dbxref=GenBank:WP_000631567.1;Name=WP_000631567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903404.1;locus_tag=D5F94_RS02710;product=methionyl aminopeptidase;protein_id=WP_000631567.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 168841 169761 . + . ID=gene-D5F94_RS02715;Name=D5F94_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02715;old_locus_tag=D5F94_02715 NZ_QYTD01000003.1 Protein Homology CDS 168841 169761 . + 0 ID=cds-WP_000768440.1;Parent=gene-D5F94_RS02715;Dbxref=GenBank:WP_000768440.1;Name=WP_000768440.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767751.1;locus_tag=D5F94_RS02715;product=YihY/virulence factor BrkB family protein;protein_id=WP_000768440.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 169975 171192 . - . ID=gene-D5F94_RS02720;Name=D5F94_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02720;old_locus_tag=D5F94_02720 NZ_QYTD01000003.1 Protein Homology CDS 169975 171192 . - 0 ID=cds-WP_001291561.1;Parent=gene-D5F94_RS02720;Dbxref=GenBank:WP_001291561.1;Name=WP_001291561.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220015.1;locus_tag=D5F94_RS02720;product=tyrosine-type recombinase/integrase;protein_id=WP_001291561.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 171274 171477 . - . ID=gene-D5F94_RS02725;Name=D5F94_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02725;old_locus_tag=D5F94_02725 NZ_QYTD01000003.1 Protein Homology CDS 171274 171477 . - 0 ID=cds-WP_000814511.1;Parent=gene-D5F94_RS02725;Dbxref=GenBank:WP_000814511.1;Name=WP_000814511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006730246.1;locus_tag=D5F94_RS02725;product=excisionase;protein_id=WP_000814511.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 171938 172168 . - . ID=gene-D5F94_RS02735;Name=D5F94_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02735;old_locus_tag=D5F94_02735 NZ_QYTD01000003.1 Protein Homology CDS 171938 172168 . - 0 ID=cds-WP_000857133.1;Parent=gene-D5F94_RS02735;Dbxref=GenBank:WP_000857133.1;Name=WP_000857133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002411750.1;locus_tag=D5F94_RS02735;product=helix-turn-helix domain-containing protein;protein_id=WP_000857133.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 172165 172587 . - . ID=gene-D5F94_RS02740;Name=D5F94_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02740;old_locus_tag=D5F94_02740 NZ_QYTD01000003.1 Protein Homology CDS 172165 172587 . - 0 ID=cds-WP_000804885.1;Parent=gene-D5F94_RS02740;Dbxref=GenBank:WP_000804885.1;Name=WP_000804885.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006733729.1;locus_tag=D5F94_RS02740;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_000804885.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 173093 173446 . + . ID=gene-D5F94_RS02750;Name=D5F94_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02750;old_locus_tag=D5F94_02750 NZ_QYTD01000003.1 Protein Homology CDS 173093 173446 . + 0 ID=cds-WP_001227347.1;Parent=gene-D5F94_RS02750;Dbxref=GenBank:WP_001227347.1;Name=WP_001227347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227347.1;locus_tag=D5F94_RS02750;product=helix-turn-helix transcriptional regulator;protein_id=WP_001227347.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 173506 173691 . - . ID=gene-D5F94_RS02755;Name=D5F94_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02755;old_locus_tag=D5F94_02755 NZ_QYTD01000003.1 Protein Homology CDS 173506 173691 . - 0 ID=cds-WP_011058338.1;Parent=gene-D5F94_RS02755;Dbxref=GenBank:WP_011058338.1;Name=WP_011058338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011058338.1;locus_tag=D5F94_RS02755;product=cysteine-rich KTR domain-containing protein;protein_id=WP_011058338.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 173792 175711 . - . ID=gene-D5F94_RS02760;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=D5F94_RS02760;old_locus_tag=D5F94_02760 NZ_QYTD01000003.1 Protein Homology CDS 173792 175711 . - 0 ID=cds-WP_000691727.1;Parent=gene-D5F94_RS02760;Dbxref=GenBank:WP_000691727.1;Name=WP_000691727.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=D5F94_RS02760;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=WP_000691727.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 175727 175774 . - . ID=gene-D5F94_RS10765;Name=D5F94_RS10765;end_range=175774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10765;partial=true;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 175727 175774 . - 0 ID=cds-D5F94_RS10765;Parent=gene-D5F94_RS10765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=175774,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011335.0;locus_tag=D5F94_RS10765;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 176088 177020 . - . ID=gene-D5F94_RS02775;Name=D5F94_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02775;old_locus_tag=D5F94_02775 NZ_QYTD01000003.1 Protein Homology CDS 176088 177020 . - 0 ID=cds-WP_001224319.1;Parent=gene-D5F94_RS02775;Dbxref=GenBank:WP_001224319.1;Name=WP_001224319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002989471.1;locus_tag=D5F94_RS02775;product=conjugal transfer protein;protein_id=WP_001224319.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 177017 178018 . - . ID=gene-D5F94_RS02780;Name=D5F94_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02780;old_locus_tag=D5F94_02780 NZ_QYTD01000003.1 Protein Homology CDS 177017 178018 . - 0 ID=cds-WP_000769868.1;Parent=gene-D5F94_RS02780;Dbxref=GenBank:WP_000769868.1;Name=WP_000769868.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368130.1;locus_tag=D5F94_RS02780;product=bifunctional lytic transglycosylase/C40 family peptidase;protein_id=WP_000769868.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 178015 180192 . - . ID=gene-D5F94_RS02785;Name=D5F94_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02785;old_locus_tag=D5F94_02785 NZ_QYTD01000003.1 Protein Homology CDS 178015 180192 . - 0 ID=cds-WP_000804748.1;Parent=gene-D5F94_RS02785;Dbxref=GenBank:WP_000804748.1;Name=WP_000804748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646277.1;locus_tag=D5F94_RS02785;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_000804748.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 180195 182642 . - . ID=gene-D5F94_RS02790;Name=tcpF;gbkey=Gene;gene=tcpF;gene_biotype=protein_coding;locus_tag=D5F94_RS02790;old_locus_tag=D5F94_02790 NZ_QYTD01000003.1 Protein Homology CDS 180195 182642 . - 0 ID=cds-WP_000331160.1;Parent=gene-D5F94_RS02790;Dbxref=GenBank:WP_000331160.1;Name=WP_000331160.1;gbkey=CDS;gene=tcpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331151.1;locus_tag=D5F94_RS02790;product=conjugal transfer ATPase TcpF;protein_id=WP_000331160.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 182626 183018 . - . ID=gene-D5F94_RS02795;Name=D5F94_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02795;old_locus_tag=D5F94_02795 NZ_QYTD01000003.1 Protein Homology CDS 182626 183018 . - 0 ID=cds-WP_000723888.1;Parent=gene-D5F94_RS02795;Dbxref=GenBank:WP_000723888.1;Name=WP_000723888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345009.1;locus_tag=D5F94_RS02795;product=conjugal transfer protein;protein_id=WP_000723888.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 183107 183604 . - . ID=gene-D5F94_RS02800;Name=D5F94_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02800;old_locus_tag=D5F94_02800 NZ_QYTD01000003.1 Protein Homology CDS 183107 183604 . - 0 ID=cds-WP_000342539.1;Parent=gene-D5F94_RS02800;Dbxref=GenBank:WP_000342539.1;Name=WP_000342539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342537.1;locus_tag=D5F94_RS02800;product=antirestriction protein ArdA;protein_id=WP_000342539.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 183722 183943 . - . ID=gene-D5F94_RS02805;Name=D5F94_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02805;old_locus_tag=D5F94_02805 NZ_QYTD01000003.1 Protein Homology CDS 183722 183943 . - 0 ID=cds-WP_001009056.1;Parent=gene-D5F94_RS02805;Dbxref=GenBank:WP_001009056.1;Name=WP_001009056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002570387.1;locus_tag=D5F94_RS02805;product=hypothetical protein;protein_id=WP_001009056.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 183986 185191 . - . ID=gene-D5F94_RS02810;Name=mobT;gbkey=Gene;gene=mobT;gene_biotype=protein_coding;locus_tag=D5F94_RS02810;old_locus_tag=D5F94_02810 NZ_QYTD01000003.1 Protein Homology CDS 183986 185191 . - 0 ID=cds-WP_000398284.1;Parent=gene-D5F94_RS02810;Dbxref=GenBank:WP_000398284.1;Name=WP_000398284.1;Ontology_term=GO:0006270,GO:0003677;gbkey=CDS;gene=mobT;go_function=DNA binding|0003677||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398284.1;locus_tag=D5F94_RS02810;product=MobT family relaxase;protein_id=WP_000398284.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 185369 186754 . - . ID=gene-D5F94_RS02820;Name=D5F94_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02820;old_locus_tag=D5F94_02820 NZ_QYTD01000003.1 Protein Homology CDS 185369 186754 . - 0 ID=cds-WP_000813488.1;Parent=gene-D5F94_RS02820;Dbxref=GenBank:WP_000813488.1;Name=WP_000813488.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813487.1;locus_tag=D5F94_RS02820;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_000813488.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 186783 187169 . - . ID=gene-D5F94_RS02825;Name=D5F94_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02825;old_locus_tag=D5F94_02825 NZ_QYTD01000003.1 Protein Homology CDS 186783 187169 . - 0 ID=cds-WP_000985015.1;Parent=gene-D5F94_RS02825;Dbxref=GenBank:WP_000985015.1;Name=WP_000985015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985015.1;locus_tag=D5F94_RS02825;product=YdcP family protein;protein_id=WP_000985015.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 187185 187499 . - . ID=gene-D5F94_RS02830;Name=D5F94_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02830;old_locus_tag=D5F94_02830 NZ_QYTD01000003.1 Protein Homology CDS 187185 187499 . - 0 ID=cds-WP_000420682.1;Parent=gene-D5F94_RS02830;Dbxref=GenBank:WP_000420682.1;Name=WP_000420682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148869.1;locus_tag=D5F94_RS02830;product=YdcP family protein;protein_id=WP_000420682.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 187815 188273 . - . ID=gene-D5F94_RS02840;Name=D5F94_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02840;old_locus_tag=D5F94_02840 NZ_QYTD01000003.1 Protein Homology CDS 187815 188273 . - 0 ID=cds-WP_000239851.1;Parent=gene-D5F94_RS02840;Dbxref=GenBank:WP_000239851.1;Name=WP_000239851.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239851.1;locus_tag=D5F94_RS02840;product=GtrA family protein;protein_id=WP_000239851.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 188344 188457 . + . ID=id-NZ_QYTD01000003.1:188344..188457;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 188455 188964 . + . ID=gene-D5F94_RS02845;Name=D5F94_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02845;old_locus_tag=D5F94_02845 NZ_QYTD01000003.1 Protein Homology CDS 188455 188964 . + 0 ID=cds-WP_001091613.1;Parent=gene-D5F94_RS02845;Dbxref=GenBank:WP_001091613.1;Name=WP_001091613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631935.1;locus_tag=D5F94_RS02845;product=QueT transporter family protein;protein_id=WP_001091613.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 189104 191062 . + . ID=gene-D5F94_RS02850;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=D5F94_RS02850;old_locus_tag=D5F94_02850 NZ_QYTD01000003.1 Protein Homology CDS 189104 191062 . + 0 ID=cds-WP_001873525.1;Parent=gene-D5F94_RS02850;Dbxref=GenBank:WP_001873525.1;Name=WP_001873525.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873525.1;locus_tag=D5F94_RS02850;product=NAD-dependent DNA ligase LigA;protein_id=WP_001873525.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 191074 192093 . + . ID=gene-D5F94_RS02855;Name=D5F94_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02855;old_locus_tag=D5F94_02855 NZ_QYTD01000003.1 Protein Homology CDS 191074 192093 . + 0 ID=cds-WP_000744293.1;Parent=gene-D5F94_RS02855;Dbxref=GenBank:WP_000744293.1;Name=WP_000744293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744285.1;locus_tag=D5F94_RS02855;product=diacylglycerol kinase family lipid kinase;protein_id=WP_000744293.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 192097 194397 . + . ID=gene-D5F94_RS02860;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=D5F94_RS02860;old_locus_tag=D5F94_02860 NZ_QYTD01000003.1 Protein Homology CDS 192097 194397 . + 0 ID=cds-WP_124749360.1;Parent=gene-D5F94_RS02860;Dbxref=GenBank:WP_124749360.1;Name=WP_124749360.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370733.1;locus_tag=D5F94_RS02860;product=type I pullulanase;protein_id=WP_124749360.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 194603 196471 . + . ID=gene-D5F94_RS02865;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=D5F94_RS02865;old_locus_tag=D5F94_02865 NZ_QYTD01000003.1 Protein Homology CDS 194603 196471 . + 0 ID=cds-WP_000066082.1;Parent=gene-D5F94_RS02865;Dbxref=GenBank:WP_000066082.1;Name=WP_000066082.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631939.1;locus_tag=D5F94_RS02865;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_000066082.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 196513 197652 . + . ID=gene-D5F94_RS02870;Name=D5F94_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02870;old_locus_tag=D5F94_02870 NZ_QYTD01000003.1 Protein Homology CDS 196513 197652 . + 0 ID=cds-WP_000787290.1;Parent=gene-D5F94_RS02870;Dbxref=GenBank:WP_000787290.1;Name=WP_000787290.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019785022.1;locus_tag=D5F94_RS02870;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000787290.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 197642 198775 . + . ID=gene-D5F94_RS02875;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=D5F94_RS02875;old_locus_tag=D5F94_02875 NZ_QYTD01000003.1 Protein Homology CDS 197642 198775 . + 0 ID=cds-WP_000687087.1;Parent=gene-D5F94_RS02875;Dbxref=GenBank:WP_000687087.1;Name=WP_000687087.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgD;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687083.1;locus_tag=D5F94_RS02875;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=WP_000687087.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 198772 200202 . + . ID=gene-D5F94_RS02880;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=D5F94_RS02880;old_locus_tag=D5F94_02880 NZ_QYTD01000003.1 Protein Homology CDS 198772 200202 . + 0 ID=cds-WP_000699858.1;Parent=gene-D5F94_RS02880;Dbxref=GenBank:WP_000699858.1;Name=WP_000699858.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480692.1;locus_tag=D5F94_RS02880;product=glycogen synthase GlgA;protein_id=WP_000699858.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 200534 200734 . + . ID=gene-D5F94_RS02885;Name=D5F94_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02885;old_locus_tag=D5F94_02885 NZ_QYTD01000003.1 Protein Homology CDS 200534 200734 . + 0 ID=cds-WP_001046538.1;Parent=gene-D5F94_RS02885;Dbxref=GenBank:WP_001046538.1;Name=WP_001046538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046538.1;locus_tag=D5F94_RS02885;product=F0F1 ATP synthase subunit C;protein_id=WP_001046538.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 200767 201483 . + . ID=gene-D5F94_RS02890;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=D5F94_RS02890;old_locus_tag=D5F94_02890 NZ_QYTD01000003.1 Protein Homology CDS 200767 201483 . + 0 ID=cds-WP_000446421.1;Parent=gene-D5F94_RS02890;Dbxref=GenBank:WP_000446421.1;Name=WP_000446421.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000446422.1;locus_tag=D5F94_RS02890;product=F0F1 ATP synthase subunit A;protein_id=WP_000446421.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 201501 201998 . + . ID=gene-D5F94_RS02895;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=D5F94_RS02895;old_locus_tag=D5F94_02895 NZ_QYTD01000003.1 Protein Homology CDS 201501 201998 . + 0 ID=cds-WP_000025478.1;Parent=gene-D5F94_RS02895;Dbxref=GenBank:WP_000025478.1;Name=WP_000025478.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025481.1;locus_tag=D5F94_RS02895;product=F0F1 ATP synthase subunit B;protein_id=WP_000025478.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 201998 202534 . + . ID=gene-D5F94_RS02900;Name=D5F94_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02900;old_locus_tag=D5F94_02900 NZ_QYTD01000003.1 Protein Homology CDS 201998 202534 . + 0 ID=cds-WP_001036759.1;Parent=gene-D5F94_RS02900;Dbxref=GenBank:WP_001036759.1;Name=WP_001036759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036758.1;locus_tag=D5F94_RS02900;product=F0F1 ATP synthase subunit delta;protein_id=WP_001036759.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 202550 204055 . + . ID=gene-D5F94_RS02905;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=D5F94_RS02905;old_locus_tag=D5F94_02905 NZ_QYTD01000003.1 Protein Homology CDS 202550 204055 . + 0 ID=cds-WP_000996613.1;Parent=gene-D5F94_RS02905;Dbxref=GenBank:WP_000996613.1;Name=WP_000996613.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889023.1;locus_tag=D5F94_RS02905;product=F0F1 ATP synthase subunit alpha;protein_id=WP_000996613.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 204071 204952 . + . ID=gene-D5F94_RS02910;Name=D5F94_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02910;old_locus_tag=D5F94_02910 NZ_QYTD01000003.1 Protein Homology CDS 204071 204952 . + 0 ID=cds-WP_000919085.1;Parent=gene-D5F94_RS02910;Dbxref=GenBank:WP_000919085.1;Name=WP_000919085.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919083.1;locus_tag=D5F94_RS02910;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000919085.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 205026 206432 . + . ID=gene-D5F94_RS02915;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=D5F94_RS02915;old_locus_tag=D5F94_02915 NZ_QYTD01000003.1 Protein Homology CDS 205026 206432 . + 0 ID=cds-WP_000094375.1;Parent=gene-D5F94_RS02915;Dbxref=GenBank:WP_000094375.1;Name=WP_000094375.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643977.1;locus_tag=D5F94_RS02915;product=F0F1 ATP synthase subunit beta;protein_id=WP_000094375.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 206445 206858 . + . ID=gene-D5F94_RS02920;Name=D5F94_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02920;old_locus_tag=D5F94_02920 NZ_QYTD01000003.1 Protein Homology CDS 206445 206858 . + 0 ID=cds-WP_000068054.1;Parent=gene-D5F94_RS02920;Dbxref=GenBank:WP_000068054.1;Name=WP_000068054.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068055.1;locus_tag=D5F94_RS02920;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_000068054.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 206923 207153 . + . ID=gene-D5F94_RS02925;Name=D5F94_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02925;old_locus_tag=D5F94_02925 NZ_QYTD01000003.1 Protein Homology CDS 206923 207153 . + 0 ID=cds-WP_000602601.1;Parent=gene-D5F94_RS02925;Dbxref=GenBank:WP_000602601.1;Name=WP_000602601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602601.1;locus_tag=D5F94_RS02925;product=DUF1146 family protein;protein_id=WP_000602601.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 207216 208487 . + . ID=gene-D5F94_RS02930;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=D5F94_RS02930;old_locus_tag=D5F94_02930 NZ_QYTD01000003.1 Protein Homology CDS 207216 208487 . + 0 ID=cds-WP_000357877.1;Parent=gene-D5F94_RS02930;Dbxref=GenBank:WP_000357877.1;Name=WP_000357877.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357880.1;locus_tag=D5F94_RS02930;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357877.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 208489 208680 . + . ID=gene-D5F94_RS02935;Name=D5F94_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02935;old_locus_tag=D5F94_02935 NZ_QYTD01000003.1 Protein Homology CDS 208489 208680 . + 0 ID=cds-WP_000168511.1;Parent=gene-D5F94_RS02935;Dbxref=GenBank:WP_000168511.1;Name=WP_000168511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168511.1;locus_tag=D5F94_RS02935;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000168511.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 208755 209612 . + . ID=gene-D5F94_RS02940;Name=D5F94_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02940;old_locus_tag=D5F94_02940 NZ_QYTD01000003.1 Protein Homology CDS 208755 209612 . + 0 ID=cds-WP_124749361.1;Parent=gene-D5F94_RS02940;Dbxref=GenBank:WP_124749361.1;Name=WP_124749361.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162649.1;locus_tag=D5F94_RS02940;product=DNA/RNA non-specific endonuclease;protein_id=WP_124749361.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 209903 210943 . + . ID=gene-D5F94_RS02945;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=D5F94_RS02945;old_locus_tag=D5F94_02945 NZ_QYTD01000003.1 Protein Homology CDS 209903 210943 . + 0 ID=cds-WP_000365655.1;Parent=gene-D5F94_RS02945;Dbxref=GenBank:WP_000365655.1;Name=WP_000365655.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365656.1;locus_tag=D5F94_RS02945;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000365655.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 211026 211547 . + . ID=gene-D5F94_RS02950;Name=D5F94_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02950;old_locus_tag=D5F94_02950 NZ_QYTD01000003.1 Protein Homology CDS 211026 211547 . + 0 ID=cds-WP_000078401.1;Parent=gene-D5F94_RS02950;Dbxref=GenBank:WP_000078401.1;Name=WP_000078401.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078399.1;locus_tag=D5F94_RS02950;product=GNAT family N-acetyltransferase;protein_id=WP_000078401.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 211600 214005 . + . ID=gene-D5F94_RS02955;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=D5F94_RS02955;old_locus_tag=D5F94_02955 NZ_QYTD01000003.1 Protein Homology CDS 211600 214005 . + 0 ID=cds-WP_016480696.1;Parent=gene-D5F94_RS02955;Dbxref=GenBank:WP_016480696.1;Name=WP_016480696.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961574.1;locus_tag=D5F94_RS02955;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_016480696.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 214077 214979 . - . ID=gene-D5F94_RS02960;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=D5F94_RS02960;old_locus_tag=D5F94_02960 NZ_QYTD01000003.1 Protein Homology CDS 214077 214979 . - 0 ID=cds-WP_124749363.1;Parent=gene-D5F94_RS02960;Dbxref=GenBank:WP_124749363.1;Name=WP_124749363.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650877.1;locus_tag=D5F94_RS02960;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_124749363.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 215157 218390 . + . ID=gene-D5F94_RS02965;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=D5F94_RS02965;old_locus_tag=D5F94_02965 NZ_QYTD01000003.1 Protein Homology CDS 215157 218390 . + 0 ID=cds-WP_086163313.1;Parent=gene-D5F94_RS02965;Dbxref=GenBank:WP_086163313.1;Name=WP_086163313.1;Ontology_term=GO:0000724,GO:0004518;gbkey=CDS;gene=rexB;go_function=nuclease activity|0004518||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767794.1;locus_tag=D5F94_RS02965;product=ATP-dependent nuclease subunit B;protein_id=WP_086163313.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 218380 222003 . + . ID=gene-D5F94_RS02970;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=D5F94_RS02970;old_locus_tag=D5F94_02970 NZ_QYTD01000003.1 Protein Homology CDS 218380 222003 . + 0 ID=cds-WP_016502824.1;Parent=gene-D5F94_RS02970;Dbxref=GenBank:WP_016502824.1;Name=WP_016502824.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143231.1;locus_tag=D5F94_RS02970;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_016502824.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 222016 222933 . + . ID=gene-D5F94_RS02975;Name=D5F94_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02975;old_locus_tag=D5F94_02975 NZ_QYTD01000003.1 Protein Homology CDS 222016 222933 . + 0 ID=cds-WP_000634649.1;Parent=gene-D5F94_RS02975;Dbxref=GenBank:WP_000634649.1;Name=WP_000634649.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634642.1;locus_tag=D5F94_RS02975;product=magnesium transporter CorA family protein;protein_id=WP_000634649.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 222965 224341 . - . ID=gene-D5F94_RS02980;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=D5F94_RS02980;old_locus_tag=D5F94_02980 NZ_QYTD01000003.1 Protein Homology CDS 222965 224341 . - 0 ID=cds-WP_000028886.1;Parent=gene-D5F94_RS02980;Dbxref=GenBank:WP_000028886.1;Name=WP_000028886.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028905.1;locus_tag=D5F94_RS02980;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000028886.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 224469 226379 . + . ID=gene-D5F94_RS02985;Name=D5F94_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02985;old_locus_tag=D5F94_02985 NZ_QYTD01000003.1 Protein Homology CDS 224469 226379 . + 0 ID=cds-WP_017647152.1;Parent=gene-D5F94_RS02985;Dbxref=GenBank:WP_017647152.1;Name=WP_017647152.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647152.1;locus_tag=D5F94_RS02985;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_017647152.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 226530 227498 . + . ID=gene-D5F94_RS02990;Name=D5F94_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02990;old_locus_tag=D5F94_02990 NZ_QYTD01000003.1 Protein Homology CDS 226530 227498 . + 0 ID=cds-WP_000258166.1;Parent=gene-D5F94_RS02990;Dbxref=GenBank:WP_000258166.1;Name=WP_000258166.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258167.1;locus_tag=D5F94_RS02990;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_000258166.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 227573 228571 . + . ID=gene-D5F94_RS02995;Name=D5F94_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS02995;old_locus_tag=D5F94_02995 NZ_QYTD01000003.1 Protein Homology CDS 227573 228571 . + 0 ID=cds-WP_000005088.1;Parent=gene-D5F94_RS02995;Dbxref=GenBank:WP_000005088.1;Name=WP_000005088.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005088.1;locus_tag=D5F94_RS02995;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_000005088.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 228698 230086 . + . ID=gene-D5F94_RS03000;Name=D5F94_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03000;old_locus_tag=D5F94_03000 NZ_QYTD01000003.1 Protein Homology CDS 228698 230086 . + 0 ID=cds-WP_000257565.1;Parent=gene-D5F94_RS03000;Dbxref=GenBank:WP_000257565.1;Name=WP_000257565.1;Ontology_term=GO:0006086,GO:0016746,GO:0045254;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257567.1;locus_tag=D5F94_RS03000;product=dihydrolipoamide acetyltransferase;protein_id=WP_000257565.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 230146 231903 . + . ID=gene-D5F94_RS03005;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=D5F94_RS03005;old_locus_tag=D5F94_03005 NZ_QYTD01000003.1 Protein Homology CDS 230146 231903 . + 0 ID=cds-WP_124749365.1;Parent=gene-D5F94_RS03005;Dbxref=GenBank:WP_124749365.1;Name=WP_124749365.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863364.1;locus_tag=D5F94_RS03005;product=dihydrolipoyl dehydrogenase;protein_id=WP_124749365.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 232001 232990 . + . ID=gene-D5F94_RS03010;Name=D5F94_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03010;old_locus_tag=D5F94_03010 NZ_QYTD01000003.1 Protein Homology CDS 232001 232990 . + 0 ID=cds-WP_016502827.1;Parent=gene-D5F94_RS03010;Dbxref=GenBank:WP_016502827.1;Name=WP_016502827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875297.1;locus_tag=D5F94_RS03010;product=lipoate--protein ligase;protein_id=WP_016502827.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 233099 233884 . - . ID=gene-D5F94_RS03015;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=D5F94_RS03015;old_locus_tag=D5F94_03015 NZ_QYTD01000003.1 Protein Homology CDS 233099 233884 . - 0 ID=cds-WP_016502828.1;Parent=gene-D5F94_RS03015;Dbxref=GenBank:WP_016502828.1;Name=WP_016502828.1;Ontology_term=GO:0009252,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222744.1;locus_tag=D5F94_RS03015;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_016502828.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 233884 235227 . - . ID=gene-D5F94_RS03020;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=D5F94_RS03020;old_locus_tag=D5F94_03020 NZ_QYTD01000003.1 Protein Homology CDS 233884 235227 . - 0 ID=cds-WP_124749367.1;Parent=gene-D5F94_RS03020;Dbxref=GenBank:WP_124749367.1;Name=WP_124749367.1;Ontology_term=GO:0009252,GO:0016881,GO:0140282;gbkey=CDS;gene=murT;go_function=acid-amino acid ligase activity|0016881||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700881.1;locus_tag=D5F94_RS03020;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_124749367.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 235367 236218 . + . ID=gene-D5F94_RS03025;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=D5F94_RS03025;old_locus_tag=D5F94_03025 NZ_QYTD01000003.1 Protein Homology CDS 235367 236218 . + 0 ID=cds-WP_000350949.1;Parent=gene-D5F94_RS03025;Dbxref=GenBank:WP_000350949.1;Name=WP_000350949.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646387.1;locus_tag=D5F94_RS03025;product=diadenylate cyclase CdaA;protein_id=WP_000350949.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 236221 237180 . + . ID=gene-D5F94_RS03030;Name=D5F94_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03030;old_locus_tag=D5F94_03030 NZ_QYTD01000003.1 Protein Homology CDS 236221 237180 . + 0 ID=cds-WP_000713236.1;Parent=gene-D5F94_RS03030;Dbxref=GenBank:WP_000713236.1;Name=WP_000713236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770882.1;locus_tag=D5F94_RS03030;product=CdaR family protein;protein_id=WP_000713236.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 237234 238586 . + . ID=gene-D5F94_RS03035;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=D5F94_RS03035;old_locus_tag=D5F94_03035 NZ_QYTD01000003.1 Protein Homology CDS 237234 238586 . + 0 ID=cds-WP_000521427.1;Parent=gene-D5F94_RS03035;Dbxref=GenBank:WP_000521427.1;Name=WP_000521427.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738537.1;locus_tag=D5F94_RS03035;product=phosphoglucosamine mutase;protein_id=WP_000521427.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 238709 239080 . + . ID=gene-D5F94_RS03040;Name=D5F94_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03040;old_locus_tag=D5F94_03040 NZ_QYTD01000003.1 Protein Homology CDS 238709 239080 . + 0 ID=cds-WP_000159234.1;Parent=gene-D5F94_RS03040;Dbxref=GenBank:WP_000159234.1;Name=WP_000159234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159232.1;locus_tag=D5F94_RS03040;product=YbgA family protein;protein_id=WP_000159234.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 239105 239485 . + . ID=gene-D5F94_RS03045;Name=D5F94_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03045;old_locus_tag=D5F94_03045 NZ_QYTD01000003.1 Protein Homology CDS 239105 239485 . + 0 ID=cds-WP_001241816.1;Parent=gene-D5F94_RS03045;Dbxref=GenBank:WP_001241816.1;Name=WP_001241816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480707.1;locus_tag=D5F94_RS03045;product=TIGR02328 family protein;protein_id=WP_001241816.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 239579 240709 . + . ID=gene-D5F94_RS03050;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=D5F94_RS03050;old_locus_tag=D5F94_03050 NZ_QYTD01000003.1 Protein Homology CDS 239579 240709 . + 0 ID=cds-WP_086163318.1;Parent=gene-D5F94_RS03050;Dbxref=GenBank:WP_086163318.1;Name=WP_086163318.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058522.1;locus_tag=D5F94_RS03050;product=radical SAM family heme chaperone HemW;protein_id=WP_086163318.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 240713 241450 . + . ID=gene-D5F94_RS03055;Name=D5F94_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03055;old_locus_tag=D5F94_03055 NZ_QYTD01000003.1 Protein Homology CDS 240713 241450 . + 0 ID=cds-WP_016502831.1;Parent=gene-D5F94_RS03055;Dbxref=GenBank:WP_016502831.1;Name=WP_016502831.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631960.1;locus_tag=D5F94_RS03055;product=acyl-ACP thioesterase domain-containing protein;protein_id=WP_016502831.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 241451 242221 . + . ID=gene-D5F94_RS03060;Name=D5F94_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03060;old_locus_tag=D5F94_03060 NZ_QYTD01000003.1 Protein Homology CDS 241451 242221 . + 0 ID=cds-WP_000323544.1;Parent=gene-D5F94_RS03060;Dbxref=GenBank:WP_000323544.1;Name=WP_000323544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323542.1;locus_tag=D5F94_RS03060;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_000323544.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 242211 242867 . + . ID=gene-D5F94_RS03065;Name=D5F94_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03065;old_locus_tag=D5F94_03065 NZ_QYTD01000003.1 Protein Homology CDS 242211 242867 . + 0 ID=cds-WP_086163319.1;Parent=gene-D5F94_RS03065;Dbxref=GenBank:WP_086163319.1;Name=WP_086163319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480709.1;locus_tag=D5F94_RS03065;product=TIGR01906 family membrane protein;protein_id=WP_086163319.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 243147 247259 . + . ID=gene-D5F94_RS03070;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=D5F94_RS03070;old_locus_tag=D5F94_03070 NZ_QYTD01000003.1 Protein Homology CDS 243147 247259 . + 0 ID=cds-WP_016502833.1;Parent=gene-D5F94_RS03070;Dbxref=GenBank:WP_016502833.1;Name=WP_016502833.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01865.2;locus_tag=D5F94_RS03070;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_016502833.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 247261 248130 . + . ID=gene-D5F94_RS03075;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=D5F94_RS03075;old_locus_tag=D5F94_03075 NZ_QYTD01000003.1 Protein Homology CDS 247261 248130 . + 0 ID=cds-WP_016502834.1;Parent=gene-D5F94_RS03075;Dbxref=GenBank:WP_016502834.1;Name=WP_016502834.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502834.1;locus_tag=D5F94_RS03075;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_016502834.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 248127 248468 . + . ID=gene-D5F94_RS03080;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=D5F94_RS03080;old_locus_tag=D5F94_03080 NZ_QYTD01000003.1 Protein Homology CDS 248127 248468 . + 0 ID=cds-WP_016502835.1;Parent=gene-D5F94_RS03080;Dbxref=GenBank:WP_016502835.1;Name=WP_016502835.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502835.1;locus_tag=D5F94_RS03080;product=CRISPR-associated endonuclease Cas2;protein_id=WP_016502835.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 248455 249120 . + . ID=gene-D5F94_RS03085;Name=csn2;gbkey=Gene;gene=csn2;gene_biotype=protein_coding;locus_tag=D5F94_RS03085;old_locus_tag=D5F94_03085 NZ_QYTD01000003.1 Protein Homology CDS 248455 249120 . + 0 ID=cds-WP_000590706.1;Parent=gene-D5F94_RS03085;Dbxref=GenBank:WP_000590706.1;Name=WP_000590706.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csn2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480712.1;locus_tag=D5F94_RS03085;product=type II-A CRISPR-associated protein Csn2;protein_id=WP_000590706.1;transl_table=11 NZ_QYTD01000003.1 RefSeq direct_repeat 249221 249983 . + . ID=id-NZ_QYTD01000003.1:249221..249983;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=249221..249256;rpt_unit_seq=gttttagagctgtgctgtttcgaatggttccaaaac NZ_QYTD01000003.1 RefSeq pseudogene 250036 250295 . + . ID=gene-D5F94_RS10795;Name=D5F94_RS10795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10795;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 250036 250295 . + 0 ID=cds-D5F94_RS10795;Parent=gene-D5F94_RS10795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900526.1;locus_tag=D5F94_RS10795;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 250303 250473 . + . ID=gene-D5F94_RS03090;Name=D5F94_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03090;old_locus_tag=D5F94_03090 NZ_QYTD01000003.1 GeneMarkS-2+ CDS 250303 250473 . + 0 ID=cds-WP_086163322.1;Parent=gene-D5F94_RS03090;Dbxref=GenBank:WP_086163322.1;Name=WP_086163322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F94_RS03090;product=hypothetical protein;protein_id=WP_086163322.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 250606 251022 . + . ID=gene-D5F94_RS03095;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=D5F94_RS03095;old_locus_tag=D5F94_03095 NZ_QYTD01000003.1 Protein Homology CDS 250606 251022 . + 0 ID=cds-WP_000438313.1;Parent=gene-D5F94_RS03095;Dbxref=GenBank:WP_000438313.1;Name=WP_000438313.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480713.1;locus_tag=D5F94_RS03095;product=nucleoside-diphosphate kinase;protein_id=WP_000438313.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 251158 252990 . + . ID=gene-D5F94_RS03100;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=D5F94_RS03100;old_locus_tag=D5F94_03100 NZ_QYTD01000003.1 Protein Homology CDS 251158 252990 . + 0 ID=cds-WP_124749369.1;Parent=gene-D5F94_RS03100;Dbxref=GenBank:WP_124749369.1;Name=WP_124749369.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645216.1;locus_tag=D5F94_RS03100;product=translation elongation factor 4;protein_id=WP_124749369.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 253237 255870 . + . ID=gene-D5F94_RS03105;Name=D5F94_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03105;old_locus_tag=D5F94_03105 NZ_QYTD01000003.1 Protein Homology CDS 253237 255870 . + 0 ID=cds-WP_016502838.1;Parent=gene-D5F94_RS03105;Dbxref=GenBank:WP_016502838.1;Name=WP_016502838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000678288.1;locus_tag=D5F94_RS03105;product=pneumococcal-type histidine triad protein;protein_id=WP_016502838.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 255970 256629 . + . ID=gene-D5F94_RS03110;Name=D5F94_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03110;old_locus_tag=D5F94_03110 NZ_QYTD01000003.1 Protein Homology CDS 255970 256629 . + 0 ID=cds-WP_016480716.1;Parent=gene-D5F94_RS03110;Dbxref=GenBank:WP_016480716.1;Name=WP_016480716.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001884604.1;locus_tag=D5F94_RS03110;product=HD domain-containing protein;protein_id=WP_016480716.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 256638 257102 . + . ID=gene-D5F94_RS03115;Name=D5F94_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03115;old_locus_tag=D5F94_03115 NZ_QYTD01000003.1 Protein Homology CDS 256638 257102 . + 0 ID=cds-WP_016480717.1;Parent=gene-D5F94_RS03115;Dbxref=GenBank:WP_016480717.1;Name=WP_016480717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621138.1;locus_tag=D5F94_RS03115;product=GNAT family N-acetyltransferase;protein_id=WP_016480717.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 257102 257536 . + . ID=gene-D5F94_RS03120;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=D5F94_RS03120;old_locus_tag=D5F94_03120 NZ_QYTD01000003.1 Protein Homology CDS 257102 257536 . + 0 ID=cds-WP_000665410.1;Parent=gene-D5F94_RS03120;Dbxref=GenBank:WP_000665410.1;Name=WP_000665410.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665406.1;locus_tag=D5F94_RS03120;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_000665410.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 257688 260480 . + . ID=gene-D5F94_RS03125;Name=D5F94_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03125;old_locus_tag=D5F94_03125 NZ_QYTD01000003.1 Protein Homology CDS 257688 260480 . + 0 ID=cds-WP_016502839.1;Parent=gene-D5F94_RS03125;Dbxref=GenBank:WP_016502839.1;Name=WP_016502839.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168898.1;locus_tag=D5F94_RS03125;product=cation-translocating P-type ATPase;protein_id=WP_016502839.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 260480 261583 . + . ID=gene-D5F94_RS03130;Name=D5F94_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03130;old_locus_tag=D5F94_03130 NZ_QYTD01000003.1 Protein Homology CDS 260480 261583 . + 0 ID=cds-WP_016502840.1;Parent=gene-D5F94_RS03130;Dbxref=GenBank:WP_016502840.1;Name=WP_016502840.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065314.1;locus_tag=D5F94_RS03130;product=DUF2974 domain-containing protein;protein_id=WP_016502840.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 261702 262340 . - . ID=gene-D5F94_RS03135;Name=D5F94_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03135;old_locus_tag=D5F94_03135 NZ_QYTD01000003.1 Protein Homology CDS 261702 262340 . - 0 ID=cds-WP_086163323.1;Parent=gene-D5F94_RS03135;Dbxref=GenBank:WP_086163323.1;Name=WP_086163323.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146564.1;locus_tag=D5F94_RS03135;product=CatB-related O-acetyltransferase;protein_id=WP_086163323.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 262609 262958 . - . ID=gene-D5F94_RS03140;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=D5F94_RS03140;old_locus_tag=D5F94_03140 NZ_QYTD01000003.1 cmsearch tmRNA 262609 262958 . - . ID=rna-D5F94_RS03140;Parent=gene-D5F94_RS03140;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS03140;product=transfer-messenger RNA NZ_QYTD01000003.1 cmsearch exon 262609 262958 . - . ID=exon-D5F94_RS03140-1;Parent=rna-D5F94_RS03140;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS03140;product=transfer-messenger RNA NZ_QYTD01000003.1 RefSeq gene 263051 263662 . + . ID=gene-D5F94_RS03145;Name=D5F94_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03145;old_locus_tag=D5F94_03145 NZ_QYTD01000003.1 Protein Homology CDS 263051 263662 . + 0 ID=cds-WP_001056394.1;Parent=gene-D5F94_RS03145;Dbxref=GenBank:WP_001056394.1;Name=WP_001056394.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056395.1;locus_tag=D5F94_RS03145;product=TVP38/TMEM64 family protein;protein_id=WP_001056394.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 263699 264481 . - . ID=gene-D5F94_RS03150;Name=D5F94_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03150;old_locus_tag=D5F94_03150 NZ_QYTD01000003.1 Protein Homology CDS 263699 264481 . - 0 ID=cds-WP_016480721.1;Parent=gene-D5F94_RS03150;Dbxref=GenBank:WP_016480721.1;Name=WP_016480721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645320.1;locus_tag=D5F94_RS03150;product=hypothetical protein;protein_id=WP_016480721.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 264493 265191 . - . ID=gene-D5F94_RS03155;Name=D5F94_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03155;old_locus_tag=D5F94_03155 NZ_QYTD01000003.1 Protein Homology CDS 264493 265191 . - 0 ID=cds-WP_000192683.1;Parent=gene-D5F94_RS03155;Dbxref=GenBank:WP_000192683.1;Name=WP_000192683.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192687.1;locus_tag=D5F94_RS03155;product=ABC transporter ATP-binding protein;protein_id=WP_000192683.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 265192 265560 . - . ID=gene-D5F94_RS03160;Name=D5F94_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03160;old_locus_tag=D5F94_03160 NZ_QYTD01000003.1 Protein Homology CDS 265192 265560 . - 0 ID=cds-WP_000312256.1;Parent=gene-D5F94_RS03160;Dbxref=GenBank:WP_000312256.1;Name=WP_000312256.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312257.1;locus_tag=D5F94_RS03160;product=GntR family transcriptional regulator;protein_id=WP_000312256.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 265705 268809 . + . ID=gene-D5F94_RS03165;Name=D5F94_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03165;old_locus_tag=D5F94_03165 NZ_QYTD01000003.1 Protein Homology CDS 265705 268809 . + 0 ID=cds-WP_016480722.1;Parent=gene-D5F94_RS03165;Dbxref=GenBank:WP_016480722.1;Name=WP_016480722.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457960.1;locus_tag=D5F94_RS03165;product=DNA polymerase III subunit alpha;protein_id=WP_016480722.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 268890 269912 . + . ID=gene-D5F94_RS03170;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=D5F94_RS03170;old_locus_tag=D5F94_03170 NZ_QYTD01000003.1 Protein Homology CDS 268890 269912 . + 0 ID=cds-WP_000820831.1;Parent=gene-D5F94_RS03170;Dbxref=GenBank:WP_000820831.1;Name=WP_000820831.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767829.1;locus_tag=D5F94_RS03170;product=6-phosphofructokinase;protein_id=WP_000820831.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 269961 271463 . + . ID=gene-D5F94_RS03175;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=D5F94_RS03175;old_locus_tag=D5F94_03175 NZ_QYTD01000003.1 Protein Homology CDS 269961 271463 . + 0 ID=cds-WP_124749371.1;Parent=gene-D5F94_RS03175;Dbxref=GenBank:WP_124749371.1;Name=WP_124749371.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018366040.1;locus_tag=D5F94_RS03175;product=pyruvate kinase;protein_id=WP_124749371.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 271634 272191 . + . ID=gene-D5F94_RS03180;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F94_RS03180;old_locus_tag=D5F94_03180 NZ_QYTD01000003.1 Protein Homology CDS 271634 272191 . + 0 ID=cds-WP_000240773.1;Parent=gene-D5F94_RS03180;Dbxref=GenBank:WP_000240773.1;Name=WP_000240773.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001931829.1;locus_tag=D5F94_RS03180;product=signal peptidase I;protein_id=WP_000240773.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 272460 274274 . + . ID=gene-D5F94_RS03190;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=D5F94_RS03190;old_locus_tag=D5F94_03190 NZ_QYTD01000003.1 Protein Homology CDS 272460 274274 . + 0 ID=cds-WP_000334317.1;Parent=gene-D5F94_RS03190;Dbxref=GenBank:WP_000334317.1;Name=WP_000334317.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019804802.1;locus_tag=D5F94_RS03190;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334317.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 274436 274765 . + . ID=gene-D5F94_RS03195;Name=D5F94_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03195;old_locus_tag=D5F94_03195 NZ_QYTD01000003.1 Protein Homology CDS 274436 274765 . + 0 ID=cds-WP_000056782.1;Parent=gene-D5F94_RS03195;Dbxref=GenBank:WP_000056782.1;Name=WP_000056782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056782.1;locus_tag=D5F94_RS03195;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056782.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 274901 275542 . + . ID=gene-D5F94_RS03200;Name=D5F94_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03200;old_locus_tag=D5F94_03200 NZ_QYTD01000003.1 Protein Homology CDS 274901 275542 . + 0 ID=cds-WP_000120401.1;Parent=gene-D5F94_RS03200;Dbxref=GenBank:WP_000120401.1;Name=WP_000120401.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019323647.1;locus_tag=D5F94_RS03200;product=amino acid ABC transporter permease;protein_id=WP_000120401.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 275552 276181 . + . ID=gene-D5F94_RS03205;Name=D5F94_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03205;old_locus_tag=D5F94_03205 NZ_QYTD01000003.1 Protein Homology CDS 275552 276181 . + 0 ID=cds-WP_000891276.1;Parent=gene-D5F94_RS03205;Dbxref=GenBank:WP_000891276.1;Name=WP_000891276.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854102.1;locus_tag=D5F94_RS03205;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000891276.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 276195 277028 . + . ID=gene-D5F94_RS03210;Name=D5F94_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03210;old_locus_tag=D5F94_03210 NZ_QYTD01000003.1 Protein Homology CDS 276195 277028 . + 0 ID=cds-WP_017649521.1;Parent=gene-D5F94_RS03210;Dbxref=GenBank:WP_017649521.1;Name=WP_017649521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649521.1;locus_tag=D5F94_RS03210;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_017649521.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 277113 277361 . - . ID=gene-D5F94_RS03215;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=D5F94_RS03215;old_locus_tag=D5F94_03215 NZ_QYTD01000003.1 Protein Homology CDS 277113 277361 . - 0 ID=cds-WP_001872296.1;Parent=gene-D5F94_RS03215;Dbxref=GenBank:WP_001872296.1;Name=WP_001872296.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808726.1;locus_tag=D5F94_RS03215;product=30S ribosomal protein S20;protein_id=WP_001872296.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 277415 278335 . - . ID=gene-D5F94_RS03220;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=D5F94_RS03220;old_locus_tag=D5F94_03220 NZ_QYTD01000003.1 Protein Homology CDS 277415 278335 . - 0 ID=cds-WP_001058331.1;Parent=gene-D5F94_RS03220;Dbxref=GenBank:WP_001058331.1;Name=WP_001058331.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480725.1;locus_tag=D5F94_RS03220;product=type I pantothenate kinase;protein_id=WP_001058331.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 278441 279031 . + . ID=gene-D5F94_RS03225;Name=D5F94_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03225;old_locus_tag=D5F94_03225 NZ_QYTD01000003.1 Protein Homology CDS 278441 279031 . + 0 ID=cds-WP_000002665.1;Parent=gene-D5F94_RS03225;Dbxref=GenBank:WP_000002665.1;Name=WP_000002665.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649520.1;locus_tag=D5F94_RS03225;product=class I SAM-dependent methyltransferase;protein_id=WP_000002665.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 279357 279746 . + . ID=gene-D5F94_RS03230;Name=D5F94_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03230;old_locus_tag=D5F94_03230 NZ_QYTD01000003.1 Protein Homology CDS 279357 279746 . + 0 ID=cds-WP_000526762.1;Parent=gene-D5F94_RS03230;Dbxref=GenBank:WP_000526762.1;Name=WP_000526762.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526762.1;locus_tag=D5F94_RS03230;product=cytidine deaminase;protein_id=WP_000526762.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 279811 280860 . + . ID=gene-D5F94_RS03235;Name=D5F94_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03235;old_locus_tag=D5F94_03235 NZ_QYTD01000003.1 Protein Homology CDS 279811 280860 . + 0 ID=cds-WP_001034779.1;Parent=gene-D5F94_RS03235;Dbxref=GenBank:WP_001034779.1;Name=WP_001034779.1;Ontology_term=GO:0016020,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019315854.1;locus_tag=D5F94_RS03235;product=BMP family lipoprotein;protein_id=WP_001034779.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 281005 282540 . + . ID=gene-D5F94_RS03240;Name=D5F94_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03240;old_locus_tag=D5F94_03240 NZ_QYTD01000003.1 Protein Homology CDS 281005 282540 . + 0 ID=cds-WP_124749373.1;Parent=gene-D5F94_RS03240;Dbxref=GenBank:WP_124749373.1;Name=WP_124749373.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193228.1;locus_tag=D5F94_RS03240;product=ABC transporter ATP-binding protein;protein_id=WP_124749373.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 282533 283594 . + . ID=gene-D5F94_RS03245;Name=D5F94_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03245;old_locus_tag=D5F94_03245 NZ_QYTD01000003.1 Protein Homology CDS 282533 283594 . + 0 ID=cds-WP_000036988.1;Parent=gene-D5F94_RS03245;Dbxref=GenBank:WP_000036988.1;Name=WP_000036988.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768037.1;locus_tag=D5F94_RS03245;product=ABC transporter permease;protein_id=WP_000036988.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 283596 284552 . + . ID=gene-D5F94_RS03250;Name=D5F94_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03250;old_locus_tag=D5F94_03250 NZ_QYTD01000003.1 Protein Homology CDS 283596 284552 . + 0 ID=cds-WP_000060306.1;Parent=gene-D5F94_RS03250;Dbxref=GenBank:WP_000060306.1;Name=WP_000060306.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060306.1;locus_tag=D5F94_RS03250;product=ABC transporter permease;protein_id=WP_000060306.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 284757 286127 . + . ID=gene-D5F94_RS03255;Name=nox;gbkey=Gene;gene=nox;gene_biotype=protein_coding;locus_tag=D5F94_RS03255;old_locus_tag=D5F94_03255 NZ_QYTD01000003.1 Protein Homology CDS 284757 286127 . + 0 ID=cds-WP_000036813.1;Parent=gene-D5F94_RS03255;Dbxref=GenBank:WP_000036813.1;Name=WP_000036813.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;gene=nox;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647149.1;locus_tag=D5F94_RS03255;product=H2O-forming NADH oxidase;protein_id=WP_000036813.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 286248 287237 . - . ID=gene-D5F94_RS03260;Name=D5F94_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03260;old_locus_tag=D5F94_03260 NZ_QYTD01000003.1 Protein Homology CDS 286248 287237 . - 0 ID=cds-WP_124749375.1;Parent=gene-D5F94_RS03260;Dbxref=GenBank:WP_124749375.1;Name=WP_124749375.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768616.1;locus_tag=D5F94_RS03260;product=L-lactate dehydrogenase;protein_id=WP_124749375.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 287476 289935 . + . ID=gene-D5F94_RS03265;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=D5F94_RS03265;old_locus_tag=D5F94_03265 NZ_QYTD01000003.1 Protein Homology CDS 287476 289935 . + 0 ID=cds-WP_001152981.1;Parent=gene-D5F94_RS03265;Dbxref=GenBank:WP_001152981.1;Name=WP_001152981.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767485.1;locus_tag=D5F94_RS03265;product=DNA gyrase subunit A;protein_id=WP_001152981.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 289942 290685 . + . ID=gene-D5F94_RS03270;Name=D5F94_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03270;old_locus_tag=D5F94_03270 NZ_QYTD01000003.1 Protein Homology CDS 289942 290685 . + 0 ID=cds-WP_001244682.1;Parent=gene-D5F94_RS03270;Dbxref=GenBank:WP_001244682.1;Name=WP_001244682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649516.1;locus_tag=D5F94_RS03270;product=class A sortase;protein_id=WP_001244682.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 290701 291114 . + . ID=gene-D5F94_RS03275;Name=gloA2;gbkey=Gene;gene=gloA2;gene_biotype=protein_coding;locus_tag=D5F94_RS03275;old_locus_tag=D5F94_03275 NZ_QYTD01000003.1 Protein Homology CDS 290701 291114 . + 0 ID=cds-WP_000767937.1;Parent=gene-D5F94_RS03275;Dbxref=GenBank:WP_000767937.1;Name=WP_000767937.1;gbkey=CDS;gene=gloA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644319.1;locus_tag=D5F94_RS03275;product=SMU1112c/YaeR family gloxylase I-like metalloprotein;protein_id=WP_000767937.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 291268 292230 . + . ID=gene-D5F94_RS03280;Name=D5F94_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03280;old_locus_tag=D5F94_03280 NZ_QYTD01000003.1 Protein Homology CDS 291268 292230 . + 0 ID=cds-WP_000023418.1;Parent=gene-D5F94_RS03280;Dbxref=GenBank:WP_000023418.1;Name=WP_000023418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766755.1;locus_tag=D5F94_RS03280;product=DUF1002 domain-containing protein;protein_id=WP_000023418.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 292294 293421 . - . ID=gene-D5F94_RS03285;Name=D5F94_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03285;old_locus_tag=D5F94_03285 NZ_QYTD01000003.1 Protein Homology CDS 292294 293421 . - 0 ID=cds-WP_000547446.1;Parent=gene-D5F94_RS03285;Dbxref=GenBank:WP_000547446.1;Name=WP_000547446.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547442.1;locus_tag=D5F94_RS03285;product=cation:proton antiporter;protein_id=WP_000547446.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 293691 295253 . - . ID=gene-D5F94_RS03290;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=D5F94_RS03290;old_locus_tag=D5F94_03290 NZ_QYTD01000003.1 Protein Homology CDS 293691 295253 . - 0 ID=cds-WP_000129872.1;Parent=gene-D5F94_RS03290;Dbxref=GenBank:WP_000129872.1;Name=WP_000129872.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009880616.1;locus_tag=D5F94_RS03290;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000129872.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 295466 296164 . + . ID=gene-D5F94_RS03295;Name=D5F94_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03295;old_locus_tag=D5F94_03295 NZ_QYTD01000003.1 Protein Homology CDS 295466 296164 . + 0 ID=cds-WP_000936162.1;Parent=gene-D5F94_RS03295;Dbxref=GenBank:WP_000936162.1;Name=WP_000936162.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936162.1;locus_tag=D5F94_RS03295;product=GntR family transcriptional regulator;protein_id=WP_000936162.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 296278 297612 . + . ID=gene-D5F94_RS03300;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=D5F94_RS03300;old_locus_tag=D5F94_03300 NZ_QYTD01000003.1 Protein Homology CDS 296278 297612 . + 0 ID=cds-WP_016502848.1;Parent=gene-D5F94_RS03300;Dbxref=GenBank:WP_016502848.1;Name=WP_016502848.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083753.1;locus_tag=D5F94_RS03300;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_016502848.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 297699 298442 . + . ID=gene-D5F94_RS03305;Name=D5F94_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03305;old_locus_tag=D5F94_03305 NZ_QYTD01000003.1 Protein Homology CDS 297699 298442 . + 0 ID=cds-WP_000291479.1;Parent=gene-D5F94_RS03305;Dbxref=GenBank:WP_000291479.1;Name=WP_000291479.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559006.1;locus_tag=D5F94_RS03305;product=GNAT family N-acetyltransferase;protein_id=WP_000291479.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 298575 299423 . + . ID=gene-D5F94_RS03310;Name=D5F94_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03310;old_locus_tag=D5F94_03310 NZ_QYTD01000003.1 Protein Homology CDS 298575 299423 . + 0 ID=cds-WP_000694284.1;Parent=gene-D5F94_RS03310;Dbxref=GenBank:WP_000694284.1;Name=WP_000694284.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646539.1;locus_tag=D5F94_RS03310;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000694284.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 299455 299943 . - . ID=gene-D5F94_RS03315;Name=D5F94_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03315;old_locus_tag=D5F94_03315 NZ_QYTD01000003.1 Protein Homology CDS 299455 299943 . - 0 ID=cds-WP_001140791.1;Parent=gene-D5F94_RS03315;Dbxref=GenBank:WP_001140791.1;Name=WP_001140791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140790.1;locus_tag=D5F94_RS03315;product=PASTA domain-containing protein;protein_id=WP_001140791.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 300109 301071 . + . ID=gene-D5F94_RS03320;Name=D5F94_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03320;old_locus_tag=D5F94_03320 NZ_QYTD01000003.1 Protein Homology CDS 300109 301071 . + 0 ID=cds-WP_001253128.1;Parent=gene-D5F94_RS03320;Dbxref=GenBank:WP_001253128.1;Name=WP_001253128.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253131.1;locus_tag=D5F94_RS03320;product=S41 family peptidase;protein_id=WP_001253128.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 301097 301849 . + . ID=gene-D5F94_RS03325;Name=D5F94_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03325;old_locus_tag=D5F94_03325 NZ_QYTD01000003.1 Protein Homology CDS 301097 301849 . + 0 ID=cds-WP_000923535.1;Parent=gene-D5F94_RS03325;Dbxref=GenBank:WP_000923535.1;Name=WP_000923535.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650232.1;locus_tag=D5F94_RS03325;product=ABC transporter ATP-binding protein;protein_id=WP_000923535.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 301851 303806 . + . ID=gene-D5F94_RS03330;Name=D5F94_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03330;old_locus_tag=D5F94_03330 NZ_QYTD01000003.1 Protein Homology CDS 301851 303806 . + 0 ID=cds-WP_000499553.1;Parent=gene-D5F94_RS03330;Dbxref=GenBank:WP_000499553.1;Name=WP_000499553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771661.1;locus_tag=D5F94_RS03330;product=FtsX-like permease family protein;protein_id=WP_000499553.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 303916 304584 . + . ID=gene-D5F94_RS03335;Name=D5F94_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03335;old_locus_tag=D5F94_03335 NZ_QYTD01000003.1 Protein Homology CDS 303916 304584 . + 0 ID=cds-WP_000076874.1;Parent=gene-D5F94_RS03335;Dbxref=GenBank:WP_000076874.1;Name=WP_000076874.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076877.1;locus_tag=D5F94_RS03335;product=response regulator transcription factor;protein_id=WP_000076874.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 304581 305519 . + . ID=gene-D5F94_RS03340;Name=D5F94_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03340;old_locus_tag=D5F94_03340 NZ_QYTD01000003.1 Protein Homology CDS 304581 305519 . + 0 ID=cds-WP_000620980.1;Parent=gene-D5F94_RS03340;Dbxref=GenBank:WP_000620980.1;Name=WP_000620980.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620981.1;locus_tag=D5F94_RS03340;product=sensor histidine kinase;protein_id=WP_000620980.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 305557 306627 . - . ID=gene-D5F94_RS03345;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=D5F94_RS03345;old_locus_tag=D5F94_03345 NZ_QYTD01000003.1 Protein Homology CDS 305557 306627 . - 0 ID=cds-WP_000817925.1;Parent=gene-D5F94_RS03345;Dbxref=GenBank:WP_000817925.1;Name=WP_000817925.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012658412.1;locus_tag=D5F94_RS03345;product=tyrosine recombinase XerS;protein_id=WP_000817925.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 307078 308739 . + . ID=gene-D5F94_RS03350;Name=D5F94_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03350;old_locus_tag=D5F94_03350 NZ_QYTD01000003.1 Protein Homology CDS 307078 308739 . + 0 ID=cds-WP_016502855.1;Parent=gene-D5F94_RS03350;Dbxref=GenBank:WP_016502855.1;Name=WP_016502855.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093963.1;locus_tag=D5F94_RS03350;product=peptide ABC transporter substrate-binding protein;protein_id=WP_016502855.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 308772 309545 . - . ID=gene-D5F94_RS03355;Name=D5F94_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03355;old_locus_tag=D5F94_03355 NZ_QYTD01000003.1 Protein Homology CDS 308772 309545 . - 0 ID=cds-WP_000622403.1;Parent=gene-D5F94_RS03355;Dbxref=GenBank:WP_000622403.1;Name=WP_000622403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622397.1;locus_tag=D5F94_RS03355;product=DUF3307 domain-containing protein;protein_id=WP_000622403.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 309535 310221 . - . ID=gene-D5F94_RS03360;Name=D5F94_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03360;old_locus_tag=D5F94_03360 NZ_QYTD01000003.1 Protein Homology CDS 309535 310221 . - 0 ID=cds-WP_000280308.1;Parent=gene-D5F94_RS03360;Dbxref=GenBank:WP_000280308.1;Name=WP_000280308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280304.1;locus_tag=D5F94_RS03360;product=SatD family protein;protein_id=WP_000280308.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 310288 311853 . - . ID=gene-D5F94_RS03365;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=D5F94_RS03365;old_locus_tag=D5F94_03365 NZ_QYTD01000003.1 Protein Homology CDS 310288 311853 . - 0 ID=cds-WP_000863593.1;Parent=gene-D5F94_RS03365;Dbxref=GenBank:WP_000863593.1;Name=WP_000863593.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648039.1;locus_tag=D5F94_RS03365;product=signal recognition particle protein;protein_id=WP_000863593.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 311871 312203 . - . ID=gene-D5F94_RS03370;Name=D5F94_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03370;old_locus_tag=D5F94_03370 NZ_QYTD01000003.1 Protein Homology CDS 311871 312203 . - 0 ID=cds-WP_000402075.1;Parent=gene-D5F94_RS03370;Dbxref=GenBank:WP_000402075.1;Name=WP_000402075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649495.1;locus_tag=D5F94_RS03370;product=putative DNA-binding protein;protein_id=WP_000402075.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 312292 313605 . - . ID=gene-D5F94_RS03375;Name=D5F94_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03375;old_locus_tag=D5F94_03375 NZ_QYTD01000003.1 Protein Homology CDS 312292 313605 . - 0 ID=cds-WP_000042576.1;Parent=gene-D5F94_RS03375;Dbxref=GenBank:WP_000042576.1;Name=WP_000042576.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042569.1;locus_tag=D5F94_RS03375;product=sensor histidine kinase;protein_id=WP_000042576.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 313589 314269 . - . ID=gene-D5F94_RS03380;Name=D5F94_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03380;old_locus_tag=D5F94_03380 NZ_QYTD01000003.1 Protein Homology CDS 313589 314269 . - 0 ID=cds-WP_000590620.1;Parent=gene-D5F94_RS03380;Dbxref=GenBank:WP_000590620.1;Name=WP_000590620.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644248.1;locus_tag=D5F94_RS03380;product=response regulator transcription factor;protein_id=WP_000590620.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 314431 316974 . - . ID=gene-D5F94_RS03385;Name=D5F94_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03385;old_locus_tag=D5F94_03385 NZ_QYTD01000003.1 Protein Homology CDS 314431 316974 . - 0 ID=cds-WP_124749177.1;Parent=gene-D5F94_RS03385;Dbxref=GenBank:WP_124749177.1;Name=WP_124749177.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859386.1;locus_tag=D5F94_RS03385;product=M1 family metallopeptidase;protein_id=WP_124749177.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 317120 317773 . - . ID=gene-D5F94_RS03390;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=D5F94_RS03390;old_locus_tag=D5F94_03390 NZ_QYTD01000003.1 Protein Homology CDS 317120 317773 . - 0 ID=cds-WP_000946330.1;Parent=gene-D5F94_RS03390;Dbxref=GenBank:WP_000946330.1;Name=WP_000946330.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294804.1;locus_tag=D5F94_RS03390;product=phosphate signaling complex protein PhoU;protein_id=WP_000946330.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 317807 318565 . - . ID=gene-D5F94_RS03395;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F94_RS03395;old_locus_tag=D5F94_03395 NZ_QYTD01000003.1 Protein Homology CDS 317807 318565 . - 0 ID=cds-WP_124749377.1;Parent=gene-D5F94_RS03395;Dbxref=GenBank:WP_124749377.1;Name=WP_124749377.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294590.1;locus_tag=D5F94_RS03395;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_124749377.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 318577 319380 . - . ID=gene-D5F94_RS03400;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D5F94_RS03400;old_locus_tag=D5F94_03400 NZ_QYTD01000003.1 Protein Homology CDS 318577 319380 . - 0 ID=cds-WP_000852852.1;Parent=gene-D5F94_RS03400;Dbxref=GenBank:WP_000852852.1;Name=WP_000852852.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852852.1;locus_tag=D5F94_RS03400;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000852852.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 319392 320279 . - . ID=gene-D5F94_RS03405;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D5F94_RS03405;old_locus_tag=D5F94_03405 NZ_QYTD01000003.1 Protein Homology CDS 319392 320279 . - 0 ID=cds-WP_124749379.1;Parent=gene-D5F94_RS03405;Dbxref=GenBank:WP_124749379.1;Name=WP_124749379.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992189.1;locus_tag=D5F94_RS03405;product=phosphate ABC transporter permease PstA;protein_id=WP_124749379.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 320269 321186 . - . ID=gene-D5F94_RS03410;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D5F94_RS03410;old_locus_tag=D5F94_03410 NZ_QYTD01000003.1 Protein Homology CDS 320269 321186 . - 0 ID=cds-WP_000795717.1;Parent=gene-D5F94_RS03410;Dbxref=GenBank:WP_000795717.1;Name=WP_000795717.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378778.1;locus_tag=D5F94_RS03410;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_000795717.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 321232 322098 . - . ID=gene-D5F94_RS03415;Name=D5F94_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03415;old_locus_tag=D5F94_03415 NZ_QYTD01000003.1 Protein Homology CDS 321232 322098 . - 0 ID=cds-WP_180383572.1;Parent=gene-D5F94_RS03415;Dbxref=GenBank:WP_180383572.1;Name=WP_180383572.1;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647148.1;locus_tag=D5F94_RS03415;product=phosphate ABC transporter substrate-binding protein PstS family protein;protein_id=WP_180383572.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 322277 323587 . - . ID=gene-D5F94_RS03420;Name=D5F94_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03420;old_locus_tag=D5F94_03420 NZ_QYTD01000003.1 Protein Homology CDS 322277 323587 . - 0 ID=cds-WP_016502859.1;Parent=gene-D5F94_RS03420;Dbxref=GenBank:WP_016502859.1;Name=WP_016502859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775396.1;locus_tag=D5F94_RS03420;product=RsmF rRNA methyltransferase first C-terminal domain-containing protein;protein_id=WP_016502859.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 323655 324419 . - . ID=gene-D5F94_RS03425;Name=D5F94_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03425;old_locus_tag=D5F94_03425 NZ_QYTD01000003.1 Protein Homology CDS 323655 324419 . - 0 ID=cds-WP_086163332.1;Parent=gene-D5F94_RS03425;Dbxref=GenBank:WP_086163332.1;Name=WP_086163332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338953.1;locus_tag=D5F94_RS03425;product=inositol monophosphatase family protein;protein_id=WP_086163332.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 324409 324690 . - . ID=gene-D5F94_RS03430;Name=D5F94_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03430;old_locus_tag=D5F94_03430 NZ_QYTD01000003.1 Protein Homology CDS 324409 324690 . - 0 ID=cds-WP_000625908.1;Parent=gene-D5F94_RS03430;Dbxref=GenBank:WP_000625908.1;Name=WP_000625908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625902.1;locus_tag=D5F94_RS03430;product=UPF0223 family protein;protein_id=WP_000625908.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 324683 325096 . - . ID=gene-D5F94_RS03435;Name=D5F94_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03435;old_locus_tag=D5F94_03435 NZ_QYTD01000003.1 Protein Homology CDS 324683 325096 . - 0 ID=cds-WP_000631264.1;Parent=gene-D5F94_RS03435;Dbxref=GenBank:WP_000631264.1;Name=WP_000631264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631264.1;locus_tag=D5F94_RS03435;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_000631264.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 325139 326071 . - . ID=gene-D5F94_RS03440;Name=D5F94_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03440;old_locus_tag=D5F94_03440 NZ_QYTD01000003.1 Protein Homology CDS 325139 326071 . - 0 ID=cds-WP_000690918.1;Parent=gene-D5F94_RS03440;Dbxref=GenBank:WP_000690918.1;Name=WP_000690918.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690917.1;locus_tag=D5F94_RS03440;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000690918.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 326084 326968 . - . ID=gene-D5F94_RS03445;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=D5F94_RS03445;old_locus_tag=D5F94_03445 NZ_QYTD01000003.1 Protein Homology CDS 326084 326968 . - 0 ID=cds-WP_001883507.1;Parent=gene-D5F94_RS03445;Dbxref=GenBank:WP_001883507.1;Name=WP_001883507.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001876923.1;locus_tag=D5F94_RS03445;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_001883507.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 327060 327491 . - . ID=gene-D5F94_RS03450;Name=D5F94_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03450;old_locus_tag=D5F94_03450 NZ_QYTD01000003.1 Protein Homology CDS 327060 327491 . - 0 ID=cds-WP_000702702.1;Parent=gene-D5F94_RS03450;Dbxref=GenBank:WP_000702702.1;Name=WP_000702702.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631985.1;locus_tag=D5F94_RS03450;product=GNAT family N-acetyltransferase;protein_id=WP_000702702.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 327504 328775 . - . ID=gene-D5F94_RS03455;Name=D5F94_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03455;old_locus_tag=D5F94_03455 NZ_QYTD01000003.1 Protein Homology CDS 327504 328775 . - 0 ID=cds-WP_016502865.1;Parent=gene-D5F94_RS03455;Dbxref=GenBank:WP_016502865.1;Name=WP_016502865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002580.1;locus_tag=D5F94_RS03455;product=DUF2130 domain-containing protein;protein_id=WP_016502865.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 328809 329399 . - . ID=gene-D5F94_RS03460;Name=D5F94_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03460;old_locus_tag=D5F94_03460 NZ_QYTD01000003.1 Protein Homology CDS 328809 329399 . - 0 ID=cds-WP_001135930.1;Parent=gene-D5F94_RS03460;Dbxref=GenBank:WP_001135930.1;Name=WP_001135930.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135933.1;locus_tag=D5F94_RS03460;product=restriction endonuclease subunit S;protein_id=WP_001135930.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 329506 330384 . - . ID=gene-D5F94_RS03465;Name=D5F94_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03465;old_locus_tag=D5F94_03465 NZ_QYTD01000003.1 Protein Homology CDS 329506 330384 . - 0 ID=cds-WP_086163333.1;Parent=gene-D5F94_RS03465;Dbxref=GenBank:WP_086163333.1;Name=WP_086163333.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209258.1;locus_tag=D5F94_RS03465;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_086163333.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 330490 333120 . - . ID=gene-D5F94_RS03470;Name=D5F94_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03470;old_locus_tag=D5F94_03470 NZ_QYTD01000003.1 Protein Homology CDS 330490 333120 . - 0 ID=cds-WP_016502867.1;Parent=gene-D5F94_RS03470;Dbxref=GenBank:WP_016502867.1;Name=WP_016502867.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520608.1;locus_tag=D5F94_RS03470;product=ABC transporter permease;protein_id=WP_016502867.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 333132 333833 . - . ID=gene-D5F94_RS03475;Name=D5F94_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03475;old_locus_tag=D5F94_03475 NZ_QYTD01000003.1 Protein Homology CDS 333132 333833 . - 0 ID=cds-WP_124749380.1;Parent=gene-D5F94_RS03475;Dbxref=GenBank:WP_124749380.1;Name=WP_124749380.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058545.1;locus_tag=D5F94_RS03475;product=ABC transporter ATP-binding protein;protein_id=WP_124749380.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 333970 336090 . - . ID=gene-D5F94_RS03480;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=D5F94_RS03480;old_locus_tag=D5F94_03480 NZ_QYTD01000003.1 Protein Homology CDS 333970 336090 . - 0 ID=cds-WP_086163334.1;Parent=gene-D5F94_RS03480;Dbxref=GenBank:WP_086163334.1;Name=WP_086163334.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646538.1;locus_tag=D5F94_RS03480;product=type I DNA topoisomerase;protein_id=WP_086163334.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 336185 337027 . - . ID=gene-D5F94_RS03485;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=D5F94_RS03485;old_locus_tag=D5F94_03485 NZ_QYTD01000003.1 Protein Homology CDS 336185 337027 . - 0 ID=cds-WP_001015247.1;Parent=gene-D5F94_RS03485;Dbxref=GenBank:WP_001015247.1;Name=WP_001015247.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015242.1;locus_tag=D5F94_RS03485;product=DNA-processing protein DprA;protein_id=WP_001015247.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 337165 338193 . - . ID=gene-D5F94_RS03490;Name=D5F94_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03490;old_locus_tag=D5F94_03490 NZ_QYTD01000003.1 Protein Homology CDS 337165 338193 . - 0 ID=cds-WP_086163336.1;Parent=gene-D5F94_RS03490;Dbxref=GenBank:WP_086163336.1;Name=WP_086163336.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162765.1;locus_tag=D5F94_RS03490;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_086163336.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 338255 339016 . - . ID=gene-D5F94_RS03495;Name=D5F94_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03495;old_locus_tag=D5F94_03495 NZ_QYTD01000003.1 Protein Homology CDS 338255 339016 . - 0 ID=cds-WP_000614756.1;Parent=gene-D5F94_RS03495;Dbxref=GenBank:WP_000614756.1;Name=WP_000614756.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614752.1;locus_tag=D5F94_RS03495;product=iron ABC transporter ATP-binding protein;protein_id=WP_000614756.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 339013 339987 . - . ID=gene-D5F94_RS03500;Name=D5F94_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03500;old_locus_tag=D5F94_03500 NZ_QYTD01000003.1 Protein Homology CDS 339013 339987 . - 0 ID=cds-WP_000588585.1;Parent=gene-D5F94_RS03500;Dbxref=GenBank:WP_000588585.1;Name=WP_000588585.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649486.1;locus_tag=D5F94_RS03500;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_000588585.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 339984 340946 . - . ID=gene-D5F94_RS03505;Name=D5F94_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03505;old_locus_tag=D5F94_03505 NZ_QYTD01000003.1 Protein Homology CDS 339984 340946 . - 0 ID=cds-WP_000735584.1;Parent=gene-D5F94_RS03505;Dbxref=GenBank:WP_000735584.1;Name=WP_000735584.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735591.1;locus_tag=D5F94_RS03505;product=ABC transporter permease;protein_id=WP_000735584.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 341180 341734 . - . ID=gene-D5F94_RS03510;Name=D5F94_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03510;old_locus_tag=D5F94_03510 NZ_QYTD01000003.1 Protein Homology CDS 341180 341734 . - 0 ID=cds-WP_016502872.1;Parent=gene-D5F94_RS03510;Dbxref=GenBank:WP_016502872.1;Name=WP_016502872.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502872.1;locus_tag=D5F94_RS03510;product=sugar O-acetyltransferase;protein_id=WP_016502872.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 341755 342516 . - . ID=gene-D5F94_RS03515;Name=D5F94_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03515;old_locus_tag=D5F94_03515 NZ_QYTD01000003.1 Protein Homology CDS 341755 342516 . - 0 ID=cds-WP_000201090.1;Parent=gene-D5F94_RS03515;Dbxref=GenBank:WP_000201090.1;Name=WP_000201090.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480754.1;locus_tag=D5F94_RS03515;product=ribonuclease HII;protein_id=WP_000201090.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 342503 343354 . - . ID=gene-D5F94_RS03520;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=D5F94_RS03520;old_locus_tag=D5F94_03520 NZ_QYTD01000003.1 Protein Homology CDS 342503 343354 . - 0 ID=cds-WP_000201279.1;Parent=gene-D5F94_RS03520;Dbxref=GenBank:WP_000201279.1;Name=WP_000201279.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201281.1;locus_tag=D5F94_RS03520;product=ribosome biogenesis GTPase YlqF;protein_id=WP_000201279.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 343630 344202 . - . ID=gene-D5F94_RS03525;Name=D5F94_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03525;old_locus_tag=D5F94_03525 NZ_QYTD01000003.1 Protein Homology CDS 343630 344202 . - 0 ID=cds-WP_001231795.1;Parent=gene-D5F94_RS03525;Dbxref=GenBank:WP_001231795.1;Name=WP_001231795.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231800.1;locus_tag=D5F94_RS03525;product=L%2CD-transpeptidase;protein_id=WP_001231795.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 344403 345887 . - . ID=gene-D5F94_RS03530;Name=D5F94_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03530;old_locus_tag=D5F94_03530 NZ_QYTD01000003.1 Protein Homology CDS 344403 345887 . - 0 ID=cds-WP_016502877.1;Parent=gene-D5F94_RS03530;Dbxref=GenBank:WP_016502877.1;Name=WP_016502877.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768250.1;locus_tag=D5F94_RS03530;product=carbon starvation CstA family protein;protein_id=WP_016502877.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 346043 346777 . - . ID=gene-D5F94_RS03535;Name=ltdR;gbkey=Gene;gene=ltdR;gene_biotype=protein_coding;locus_tag=D5F94_RS03535;old_locus_tag=D5F94_03535 NZ_QYTD01000003.1 Protein Homology CDS 346043 346777 . - 0 ID=cds-WP_000866964.1;Parent=gene-D5F94_RS03535;Dbxref=GenBank:WP_000866964.1;Name=WP_000866964.1;gbkey=CDS;gene=ltdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866963.1;locus_tag=D5F94_RS03535;product=response regulator transcription factor LtdR;protein_id=WP_000866964.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 346789 348528 . - . ID=gene-D5F94_RS03540;Name=D5F94_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03540;old_locus_tag=D5F94_03540 NZ_QYTD01000003.1 Protein Homology CDS 346789 348528 . - 0 ID=cds-WP_016502878.1;Parent=gene-D5F94_RS03540;Dbxref=GenBank:WP_016502878.1;Name=WP_016502878.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171904.1;locus_tag=D5F94_RS03540;product=sensor histidine kinase;protein_id=WP_016502878.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 349066 349188 . - . ID=gene-D5F94_RS03545;Name=D5F94_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03545;old_locus_tag=D5F94_03545 NZ_QYTD01000003.1 Protein Homology CDS 349066 349188 . - 0 ID=cds-WP_000472358.1;Parent=gene-D5F94_RS03545;Dbxref=GenBank:WP_000472358.1;Name=WP_000472358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472358.1;locus_tag=D5F94_RS03545;product=lipoprotein;protein_id=WP_000472358.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 349656 349835 . - . ID=gene-D5F94_RS10720;Name=D5F94_RS10720;end_range=349835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10720;old_locus_tag=D5F94_03550;partial=true;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 349656 349835 . - 0 ID=cds-D5F94_RS10720;Parent=gene-D5F94_RS10720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=349835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926392.1;locus_tag=D5F94_RS10720;partial=true;product=DUF4176 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 350075 350452 . - . ID=gene-D5F94_RS03555;Name=D5F94_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03555;old_locus_tag=D5F94_03555 NZ_QYTD01000003.1 Protein Homology CDS 350075 350452 . - 0 ID=cds-WP_000479582.1;Parent=gene-D5F94_RS03555;Dbxref=GenBank:WP_000479582.1;Name=WP_000479582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000479581.1;locus_tag=D5F94_RS03555;product=hypothetical protein;protein_id=WP_000479582.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 350843 351167 . - . ID=gene-D5F94_RS03560;Name=D5F94_RS03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS03560;old_locus_tag=D5F94_03560;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 350843 351167 . - 0 ID=cds-D5F94_RS03560;Parent=gene-D5F94_RS03560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285002.1;locus_tag=D5F94_RS03560;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 351515 352048 . - . ID=gene-D5F94_RS03570;Name=D5F94_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03570;old_locus_tag=D5F94_03570 NZ_QYTD01000003.1 Protein Homology CDS 351515 352048 . - 0 ID=cds-WP_016502882.1;Parent=gene-D5F94_RS03570;Dbxref=GenBank:WP_016502882.1;Name=WP_016502882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526054.1;locus_tag=D5F94_RS03570;product=hypothetical protein;protein_id=WP_016502882.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 352060 352746 . - . ID=gene-D5F94_RS03580;Name=D5F94_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03580;old_locus_tag=D5F94_03580 NZ_QYTD01000003.1 Protein Homology CDS 352060 352746 . - 0 ID=cds-WP_375804165.1;Parent=gene-D5F94_RS03580;Dbxref=GenBank:WP_375804165.1;Name=WP_375804165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502883.1;locus_tag=D5F94_RS03580;product=hypothetical protein;protein_id=WP_375804165.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 352751 353200 . - . ID=gene-D5F94_RS03585;Name=D5F94_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03585;old_locus_tag=D5F94_03585 NZ_QYTD01000003.1 Protein Homology CDS 352751 353200 . - 0 ID=cds-WP_001867149.1;Parent=gene-D5F94_RS03585;Dbxref=GenBank:WP_001867149.1;Name=WP_001867149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001867149.1;locus_tag=D5F94_RS03585;product=hypothetical protein;protein_id=WP_001867149.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 353595 353945 . - . ID=gene-D5F94_RS03590;Name=D5F94_RS03590;end_range=353945,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS03590;old_locus_tag=D5F94_03590;partial=true;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 353595 353945 . - 0 ID=cds-D5F94_RS03590;Parent=gene-D5F94_RS03590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=353945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649924.1;locus_tag=D5F94_RS03590;partial=true;product=CHAP domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 353942 356377 . - . ID=gene-D5F94_RS03595;Name=esaA;gbkey=Gene;gene=esaA;gene_biotype=pseudogene;locus_tag=D5F94_RS03595;old_locus_tag=D5F94_03595;partial=true;pseudo=true;start_range=.,353942 NZ_QYTD01000003.1 Protein Homology CDS 353942 356377 . - 0 ID=cds-D5F94_RS03595;Parent=gene-D5F94_RS03595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;gene=esaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828107.1;locus_tag=D5F94_RS03595;partial=true;product=type VII secretion protein EsaA;pseudo=true;start_range=.,353942;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 356459 356749 . - . ID=gene-D5F94_RS03600;Name=D5F94_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03600;old_locus_tag=D5F94_03600 NZ_QYTD01000003.1 Protein Homology CDS 356459 356749 . - 0 ID=cds-WP_000057250.1;Parent=gene-D5F94_RS03600;Dbxref=GenBank:WP_000057250.1;Name=WP_000057250.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057248.1;locus_tag=D5F94_RS03600;product=WXG100 family type VII secretion target;protein_id=WP_000057250.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 356918 357208 . - . ID=gene-D5F94_RS03605;Name=D5F94_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03605;old_locus_tag=D5F94_03605 NZ_QYTD01000003.1 Protein Homology CDS 356918 357208 . - 0 ID=cds-WP_000057247.1;Parent=gene-D5F94_RS03605;Dbxref=GenBank:WP_000057247.1;Name=WP_000057247.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057248.1;locus_tag=D5F94_RS03605;product=WXG100 family type VII secretion target;protein_id=WP_000057247.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 357325 358107 . - . ID=gene-D5F94_RS03610;Name=D5F94_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03610;old_locus_tag=D5F94_03610 NZ_QYTD01000003.1 Protein Homology CDS 357325 358107 . - 0 ID=cds-WP_001883331.1;Parent=gene-D5F94_RS03610;Dbxref=GenBank:WP_001883331.1;Name=WP_001883331.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001923787.1;locus_tag=D5F94_RS03610;product=lipase family protein;protein_id=WP_001883331.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 358104 358427 . - . ID=gene-D5F94_RS03615;Name=D5F94_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03615;old_locus_tag=D5F94_03615 NZ_QYTD01000003.1 Protein Homology CDS 358104 358427 . - 0 ID=cds-WP_000921240.1;Parent=gene-D5F94_RS03615;Dbxref=GenBank:WP_000921240.1;Name=WP_000921240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000921242.1;locus_tag=D5F94_RS03615;product=hypothetical protein;protein_id=WP_000921240.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 358554 361736 . - . ID=gene-D5F94_RS03620;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=D5F94_RS03620;old_locus_tag=D5F94_03620 NZ_QYTD01000003.1 Protein Homology CDS 358554 361736 . - 0 ID=cds-WP_124749382.1;Parent=gene-D5F94_RS03620;Dbxref=GenBank:WP_124749382.1;Name=WP_124749382.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646011.1;locus_tag=D5F94_RS03620;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_124749382.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 361767 362843 . - . ID=gene-D5F94_RS03625;Name=D5F94_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03625;old_locus_tag=D5F94_03625 NZ_QYTD01000003.1 Protein Homology CDS 361767 362843 . - 0 ID=cds-WP_016502886.1;Parent=gene-D5F94_RS03625;Dbxref=GenBank:WP_016502886.1;Name=WP_016502886.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826106.1;locus_tag=D5F94_RS03625;product=carbamoyl phosphate synthase small subunit;protein_id=WP_016502886.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 362854 363780 . - . ID=gene-D5F94_RS03630;Name=D5F94_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03630;old_locus_tag=D5F94_03630 NZ_QYTD01000003.1 Protein Homology CDS 362854 363780 . - 0 ID=cds-WP_001016474.1;Parent=gene-D5F94_RS03630;Dbxref=GenBank:WP_001016474.1;Name=WP_001016474.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016475.1;locus_tag=D5F94_RS03630;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_001016474.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 363945 365237 . - . ID=gene-D5F94_RS03635;Name=D5F94_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03635;old_locus_tag=D5F94_03635 NZ_QYTD01000003.1 Protein Homology CDS 363945 365237 . - 0 ID=cds-WP_016502887.1;Parent=gene-D5F94_RS03635;Dbxref=GenBank:WP_016502887.1;Name=WP_016502887.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771964.1;locus_tag=D5F94_RS03635;product=dihydroorotase;protein_id=WP_016502887.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 365249 365878 . - . ID=gene-D5F94_RS03640;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=D5F94_RS03640;old_locus_tag=D5F94_03640 NZ_QYTD01000003.1 Protein Homology CDS 365249 365878 . - 0 ID=cds-WP_016502888.1;Parent=gene-D5F94_RS03640;Dbxref=GenBank:WP_016502888.1;Name=WP_016502888.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502888.1;locus_tag=D5F94_RS03640;product=orotate phosphoribosyltransferase;protein_id=WP_016502888.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 365891 366592 . - . ID=gene-D5F94_RS03645;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=D5F94_RS03645;old_locus_tag=D5F94_03645 NZ_QYTD01000003.1 Protein Homology CDS 365891 366592 . - 0 ID=cds-WP_016480780.1;Parent=gene-D5F94_RS03645;Dbxref=GenBank:WP_016480780.1;Name=WP_016480780.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890806.1;locus_tag=D5F94_RS03645;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_016480780.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 366805 368037 . - . ID=gene-D5F94_RS03650;Name=D5F94_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03650;old_locus_tag=D5F94_03650 NZ_QYTD01000003.1 Protein Homology CDS 366805 368037 . - 0 ID=cds-WP_016480781.1;Parent=gene-D5F94_RS03650;Dbxref=GenBank:WP_016480781.1;Name=WP_016480781.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001178658.1;locus_tag=D5F94_RS03650;product=threonine/serine ThrE exporter family protein;protein_id=WP_016480781.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 368077 369618 . - . ID=gene-D5F94_RS03655;Name=D5F94_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03655;old_locus_tag=D5F94_03655 NZ_QYTD01000003.1 Protein Homology CDS 368077 369618 . - 0 ID=cds-WP_000025412.1;Parent=gene-D5F94_RS03655;Dbxref=GenBank:WP_000025412.1;Name=WP_000025412.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025412.1;locus_tag=D5F94_RS03655;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_000025412.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 369749 370087 . - . ID=gene-D5F94_RS03660;Name=D5F94_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03660;old_locus_tag=D5F94_03660 NZ_QYTD01000003.1 Protein Homology CDS 369749 370087 . - 0 ID=cds-WP_001165746.1;Parent=gene-D5F94_RS03660;Dbxref=GenBank:WP_001165746.1;Name=WP_001165746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165748.1;locus_tag=D5F94_RS03660;product=ATP cone domain-containing protein;protein_id=WP_001165746.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 370257 371333 . - . ID=gene-D5F94_RS03665;Name=D5F94_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03665;old_locus_tag=D5F94_03665 NZ_QYTD01000003.1 Protein Homology CDS 370257 371333 . - 0 ID=cds-WP_124749384.1;Parent=gene-D5F94_RS03665;Dbxref=GenBank:WP_124749384.1;Name=WP_124749384.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502892.1;locus_tag=D5F94_RS03665;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_124749384.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 371541 372005 . - . ID=gene-D5F94_RS03670;Name=D5F94_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03670;old_locus_tag=D5F94_03670 NZ_QYTD01000003.1 Protein Homology CDS 371541 372005 . - 0 ID=cds-WP_124749386.1;Parent=gene-D5F94_RS03670;Dbxref=GenBank:WP_124749386.1;Name=WP_124749386.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482169.1;locus_tag=D5F94_RS03670;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_124749386.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 372689 374284 . - . ID=gene-D5F94_RS03680;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=D5F94_RS03680;old_locus_tag=D5F94_03680 NZ_QYTD01000003.1 Protein Homology CDS 372689 374284 . - 0 ID=cds-WP_016480784.1;Parent=gene-D5F94_RS03680;Dbxref=GenBank:WP_016480784.1;Name=WP_016480784.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638280.1;locus_tag=D5F94_RS03680;product=cardiolipin synthase;protein_id=WP_016480784.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 374403 376073 . - . ID=gene-D5F94_RS03685;Name=D5F94_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03685;old_locus_tag=D5F94_03685 NZ_QYTD01000003.1 Protein Homology CDS 374403 376073 . - 0 ID=cds-WP_016502894.1;Parent=gene-D5F94_RS03685;Dbxref=GenBank:WP_016502894.1;Name=WP_016502894.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646002.1;locus_tag=D5F94_RS03685;product=formate--tetrahydrofolate ligase;protein_id=WP_016502894.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 376163 377182 . - . ID=gene-D5F94_RS03690;Name=D5F94_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03690;old_locus_tag=D5F94_03690 NZ_QYTD01000003.1 Protein Homology CDS 376163 377182 . - 0 ID=cds-WP_000280831.1;Parent=gene-D5F94_RS03690;Dbxref=GenBank:WP_000280831.1;Name=WP_000280831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280824.1;locus_tag=D5F94_RS03690;product=lipoate--protein ligase;protein_id=WP_000280831.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 377209 378087 . - . ID=gene-D5F94_RS03695;Name=D5F94_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03695;old_locus_tag=D5F94_03695 NZ_QYTD01000003.1 Protein Homology CDS 377209 378087 . - 0 ID=cds-WP_000219405.1;Parent=gene-D5F94_RS03695;Dbxref=GenBank:WP_000219405.1;Name=WP_000219405.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219408.1;locus_tag=D5F94_RS03695;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_000219405.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 378056 378874 . - . ID=gene-D5F94_RS03700;Name=D5F94_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03700;old_locus_tag=D5F94_03700 NZ_QYTD01000003.1 Protein Homology CDS 378056 378874 . - 0 ID=cds-WP_001133601.1;Parent=gene-D5F94_RS03700;Dbxref=GenBank:WP_001133601.1;Name=WP_001133601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767264.1;locus_tag=D5F94_RS03700;product=protein-ADP-ribose hydrolase;protein_id=WP_001133601.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 378867 379199 . - . ID=gene-D5F94_RS03705;Name=D5F94_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03705;old_locus_tag=D5F94_03705 NZ_QYTD01000003.1 Protein Homology CDS 378867 379199 . - 0 ID=cds-WP_000717326.1;Parent=gene-D5F94_RS03705;Dbxref=GenBank:WP_000717326.1;Name=WP_000717326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717324.1;locus_tag=D5F94_RS03705;product=glycine cleavage system protein H;protein_id=WP_000717326.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 379228 380214 . - . ID=gene-D5F94_RS03710;Name=D5F94_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03710;old_locus_tag=D5F94_03710 NZ_QYTD01000003.1 Protein Homology CDS 379228 380214 . - 0 ID=cds-WP_016502895.1;Parent=gene-D5F94_RS03710;Dbxref=GenBank:WP_016502895.1;Name=WP_016502895.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778222.1;locus_tag=D5F94_RS03710;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_016502895.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 380211 381410 . - . ID=gene-D5F94_RS03715;Name=D5F94_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03715;old_locus_tag=D5F94_03715 NZ_QYTD01000003.1 Protein Homology CDS 380211 381410 . - 0 ID=cds-WP_016502896.1;Parent=gene-D5F94_RS03715;Dbxref=GenBank:WP_016502896.1;Name=WP_016502896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649443.1;locus_tag=D5F94_RS03715;product=NADH-dependent flavin oxidoreductase;protein_id=WP_016502896.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 381403 382239 . - . ID=gene-D5F94_RS03720;Name=D5F94_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03720;old_locus_tag=D5F94_03720 NZ_QYTD01000003.1 Protein Homology CDS 381403 382239 . - 0 ID=cds-WP_000455160.1;Parent=gene-D5F94_RS03720;Dbxref=GenBank:WP_000455160.1;Name=WP_000455160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455162.1;locus_tag=D5F94_RS03720;product=lipoate--protein ligase family protein;protein_id=WP_000455160.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 382393 383079 . + . ID=gene-D5F94_RS03725;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=D5F94_RS03725;old_locus_tag=D5F94_03725 NZ_QYTD01000003.1 Protein Homology CDS 382393 383079 . + 0 ID=cds-WP_086163357.1;Parent=gene-D5F94_RS03725;Dbxref=GenBank:WP_086163357.1;Name=WP_086163357.1;Ontology_term=GO:0015937,GO:0004632;gbkey=CDS;gene=coaB;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019320019.1;locus_tag=D5F94_RS03725;product=phosphopantothenate--cysteine ligase;protein_id=WP_086163357.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 383072 383614 . + . ID=gene-D5F94_RS03730;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=D5F94_RS03730;old_locus_tag=D5F94_03730 NZ_QYTD01000003.1 Protein Homology CDS 383072 383614 . + 0 ID=cds-WP_000595814.1;Parent=gene-D5F94_RS03730;Dbxref=GenBank:WP_000595814.1;Name=WP_000595814.1;Ontology_term=GO:0015937,GO:0004633;gbkey=CDS;gene=coaC;go_function=phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595815.1;locus_tag=D5F94_RS03730;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_000595814.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 383660 384232 . + . ID=gene-D5F94_RS03735;Name=D5F94_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03735;old_locus_tag=D5F94_03735 NZ_QYTD01000003.1 Protein Homology CDS 383660 384232 . + 0 ID=cds-WP_000728786.1;Parent=gene-D5F94_RS03735;Dbxref=GenBank:WP_000728786.1;Name=WP_000728786.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480791.1;locus_tag=D5F94_RS03735;product=ECF transporter S component;protein_id=WP_000728786.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 384342 386060 . + . ID=gene-D5F94_RS03740;Name=D5F94_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03740;old_locus_tag=D5F94_03740 NZ_QYTD01000003.1 Protein Homology CDS 384342 386060 . + 0 ID=cds-WP_000222544.1;Parent=gene-D5F94_RS03740;Dbxref=GenBank:WP_000222544.1;Name=WP_000222544.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222553.1;locus_tag=D5F94_RS03740;product=phospho-sugar mutase;protein_id=WP_000222544.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 386124 386321 . - . ID=gene-D5F94_RS03745;Name=D5F94_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03745;old_locus_tag=D5F94_03745 NZ_QYTD01000003.1 Protein Homology CDS 386124 386321 . - 0 ID=cds-WP_000746856.1;Parent=gene-D5F94_RS03745;Dbxref=GenBank:WP_000746856.1;Name=WP_000746856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746853.1;locus_tag=D5F94_RS03745;product=hypothetical protein;protein_id=WP_000746856.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 386335 388068 . - . ID=gene-D5F94_RS03750;Name=D5F94_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03750;old_locus_tag=D5F94_03750 NZ_QYTD01000003.1 Protein Homology CDS 386335 388068 . - 0 ID=cds-WP_016502900.1;Parent=gene-D5F94_RS03750;Dbxref=GenBank:WP_016502900.1;Name=WP_016502900.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647639.1;locus_tag=D5F94_RS03750;product=ABC transporter ATP-binding protein;protein_id=WP_016502900.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 388069 389787 . - . ID=gene-D5F94_RS03755;Name=D5F94_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03755;old_locus_tag=D5F94_03755 NZ_QYTD01000003.1 Protein Homology CDS 388069 389787 . - 0 ID=cds-WP_086163350.1;Parent=gene-D5F94_RS03755;Dbxref=GenBank:WP_086163350.1;Name=WP_086163350.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000826948.1;locus_tag=D5F94_RS03755;product=ABC transporter ATP-binding protein;protein_id=WP_086163350.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 389799 390401 . - . ID=gene-D5F94_RS03760;Name=D5F94_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03760;old_locus_tag=D5F94_03760 NZ_QYTD01000003.1 Protein Homology CDS 389799 390401 . - 0 ID=cds-WP_000472259.1;Parent=gene-D5F94_RS03760;Dbxref=GenBank:WP_000472259.1;Name=WP_000472259.1;Ontology_term=GO:0016052;gbkey=CDS;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647126.1;locus_tag=D5F94_RS03760;product=lysozyme family protein;protein_id=WP_000472259.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 390403 391380 . - . ID=gene-D5F94_RS03765;Name=D5F94_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03765;old_locus_tag=D5F94_03765 NZ_QYTD01000003.1 Protein Homology CDS 390403 391380 . - 0 ID=cds-WP_000968655.1;Parent=gene-D5F94_RS03765;Dbxref=GenBank:WP_000968655.1;Name=WP_000968655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645607.1;locus_tag=D5F94_RS03765;product=nucleoid-associated protein;protein_id=WP_000968655.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 391385 392641 . - . ID=gene-D5F94_RS03770;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=D5F94_RS03770;old_locus_tag=D5F94_03770 NZ_QYTD01000003.1 Protein Homology CDS 391385 392641 . - 0 ID=cds-WP_000575546.1;Parent=gene-D5F94_RS03770;Dbxref=GenBank:WP_000575546.1;Name=WP_000575546.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863152.1;locus_tag=D5F94_RS03770;product=serine hydroxymethyltransferase;protein_id=WP_000575546.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 392733 393329 . - . ID=gene-D5F94_RS03775;Name=D5F94_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03775;old_locus_tag=D5F94_03775 NZ_QYTD01000003.1 Protein Homology CDS 392733 393329 . - 0 ID=cds-WP_000998734.1;Parent=gene-D5F94_RS03775;Dbxref=GenBank:WP_000998734.1;Name=WP_000998734.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998738.1;locus_tag=D5F94_RS03775;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000998734.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 393322 394152 . - . ID=gene-D5F94_RS03780;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=D5F94_RS03780;old_locus_tag=D5F94_03780 NZ_QYTD01000003.1 Protein Homology CDS 393322 394152 . - 0 ID=cds-WP_001104941.1;Parent=gene-D5F94_RS03780;Dbxref=GenBank:WP_001104941.1;Name=WP_001104941.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104950.1;locus_tag=D5F94_RS03780;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_001104941.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 394152 395231 . - . ID=gene-D5F94_RS03785;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=D5F94_RS03785;old_locus_tag=D5F94_03785 NZ_QYTD01000003.1 Protein Homology CDS 394152 395231 . - 0 ID=cds-WP_001028826.1;Parent=gene-D5F94_RS03785;Dbxref=GenBank:WP_001028826.1;Name=WP_001028826.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262255.1;locus_tag=D5F94_RS03785;product=peptide chain release factor 1;protein_id=WP_001028826.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 395266 395835 . - . ID=gene-D5F94_RS03790;Name=D5F94_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03790;old_locus_tag=D5F94_03790 NZ_QYTD01000003.1 Protein Homology CDS 395266 395835 . - 0 ID=cds-WP_000068109.1;Parent=gene-D5F94_RS03790;Dbxref=GenBank:WP_000068109.1;Name=WP_000068109.1;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068112.1;locus_tag=D5F94_RS03790;product=thymidine kinase;protein_id=WP_000068109.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 395973 396155 . + . ID=gene-D5F94_RS03795;Name=D5F94_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03795;old_locus_tag=D5F94_03795 NZ_QYTD01000003.1 Protein Homology CDS 395973 396155 . + 0 ID=cds-WP_001117229.1;Parent=gene-D5F94_RS03795;Dbxref=GenBank:WP_001117229.1;Name=WP_001117229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117229.1;locus_tag=D5F94_RS03795;product=4-oxalocrotonate tautomerase;protein_id=WP_001117229.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 396304 397242 . + . ID=gene-D5F94_RS03805;Name=D5F94_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03805;old_locus_tag=D5F94_03805 NZ_QYTD01000003.1 Protein Homology CDS 396304 397242 . + 0 ID=cds-WP_016502903.1;Parent=gene-D5F94_RS03805;Dbxref=GenBank:WP_016502903.1;Name=WP_016502903.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177180.1;locus_tag=D5F94_RS03805;product=FAD:protein FMN transferase;protein_id=WP_016502903.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 397260 397862 . + . ID=gene-D5F94_RS03810;Name=D5F94_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03810;old_locus_tag=D5F94_03810 NZ_QYTD01000003.1 Protein Homology CDS 397260 397862 . + 0 ID=cds-WP_000766628.1;Parent=gene-D5F94_RS03810;Dbxref=GenBank:WP_000766628.1;Name=WP_000766628.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308468.1;locus_tag=D5F94_RS03810;product=NADPH-dependent FMN reductase;protein_id=WP_000766628.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 397886 399121 . + . ID=gene-D5F94_RS03815;Name=D5F94_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03815;old_locus_tag=D5F94_03815 NZ_QYTD01000003.1 Protein Homology CDS 397886 399121 . + 0 ID=cds-WP_000673640.1;Parent=gene-D5F94_RS03815;Dbxref=GenBank:WP_000673640.1;Name=WP_000673640.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673646.1;locus_tag=D5F94_RS03815;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000673640.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 399220 400008 . + . ID=gene-D5F94_RS03820;Name=D5F94_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03820;old_locus_tag=D5F94_03820 NZ_QYTD01000003.1 Protein Homology CDS 399220 400008 . + 0 ID=cds-WP_000051852.1;Parent=gene-D5F94_RS03820;Dbxref=GenBank:WP_000051852.1;Name=WP_000051852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051854.1;locus_tag=D5F94_RS03820;product=formate/nitrite transporter family protein;protein_id=WP_000051852.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 400107 401381 . - . ID=gene-D5F94_RS03825;Name=D5F94_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03825;old_locus_tag=D5F94_03825 NZ_QYTD01000003.1 Protein Homology CDS 400107 401381 . - 0 ID=cds-WP_000671148.1;Parent=gene-D5F94_RS03825;Dbxref=GenBank:WP_000671148.1;Name=WP_000671148.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671521.1;locus_tag=D5F94_RS03825;product=nucleobase:cation symporter-2 family protein;protein_id=WP_000671148.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 401381 401962 . - . ID=gene-D5F94_RS03830;Name=D5F94_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03830;old_locus_tag=D5F94_03830 NZ_QYTD01000003.1 Protein Homology CDS 401381 401962 . - 0 ID=cds-WP_000770389.1;Parent=gene-D5F94_RS03830;Dbxref=GenBank:WP_000770389.1;Name=WP_000770389.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770392.1;locus_tag=D5F94_RS03830;product=xanthine phosphoribosyltransferase;protein_id=WP_000770389.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 402067 402162 . - . ID=id-NZ_QYTD01000003.1:402067..402162;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 402218 403201 . - . ID=gene-D5F94_RS03835;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=D5F94_RS03835;old_locus_tag=D5F94_03835 NZ_QYTD01000003.1 Protein Homology CDS 402218 403201 . - 0 ID=cds-WP_016502905.1;Parent=gene-D5F94_RS03835;Dbxref=GenBank:WP_016502905.1;Name=WP_016502905.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891361.1;locus_tag=D5F94_RS03835;product=GMP reductase;protein_id=WP_016502905.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 403403 404743 . - . ID=gene-D5F94_RS03840;Name=D5F94_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03840;old_locus_tag=D5F94_03840 NZ_QYTD01000003.1 Protein Homology CDS 403403 404743 . - 0 ID=cds-WP_016502906.1;Parent=gene-D5F94_RS03840;Dbxref=GenBank:WP_016502906.1;Name=WP_016502906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480798.1;locus_tag=D5F94_RS03840;product=MFS transporter;protein_id=WP_016502906.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 405035 405706 . + . ID=gene-D5F94_RS03845;Name=D5F94_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03845;old_locus_tag=D5F94_03845 NZ_QYTD01000003.1 Protein Homology CDS 405035 405706 . + 0 ID=cds-WP_000853096.1;Parent=gene-D5F94_RS03845;Dbxref=GenBank:WP_000853096.1;Name=WP_000853096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885905.1;locus_tag=D5F94_RS03845;product=hypothetical protein;protein_id=WP_000853096.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 405778 407778 . - . ID=gene-D5F94_RS03850;Name=D5F94_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03850;old_locus_tag=D5F94_03850 NZ_QYTD01000003.1 Protein Homology CDS 405778 407778 . - 0 ID=cds-WP_001164948.1;Parent=gene-D5F94_RS03850;Dbxref=GenBank:WP_001164948.1;Name=WP_001164948.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164946.1;locus_tag=D5F94_RS03850;product=KUP/HAK/KT family potassium transporter;protein_id=WP_001164948.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 407913 408674 . - . ID=gene-D5F94_RS03855;Name=D5F94_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03855;old_locus_tag=D5F94_03855 NZ_QYTD01000003.1 Protein Homology CDS 407913 408674 . - 0 ID=cds-WP_086163353.1;Parent=gene-D5F94_RS03855;Dbxref=GenBank:WP_086163353.1;Name=WP_086163353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649058.1;locus_tag=D5F94_RS03855;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_086163353.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 408736 409728 . - . ID=gene-D5F94_RS03860;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=D5F94_RS03860;old_locus_tag=D5F94_03860 NZ_QYTD01000003.1 Protein Homology CDS 408736 409728 . - 0 ID=cds-WP_001257096.1;Parent=gene-D5F94_RS03860;Dbxref=GenBank:WP_001257096.1;Name=WP_001257096.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767953.1;locus_tag=D5F94_RS03860;product=phosphate acetyltransferase;protein_id=WP_001257096.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 409754 410638 . - . ID=gene-D5F94_RS03865;Name=D5F94_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03865;old_locus_tag=D5F94_03865 NZ_QYTD01000003.1 Protein Homology CDS 409754 410638 . - 0 ID=cds-WP_000667471.1;Parent=gene-D5F94_RS03865;Dbxref=GenBank:WP_000667471.1;Name=WP_000667471.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667470.1;locus_tag=D5F94_RS03865;product=RluA family pseudouridine synthase;protein_id=WP_000667471.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 410635 411471 . - . ID=gene-D5F94_RS03870;Name=D5F94_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03870;old_locus_tag=D5F94_03870 NZ_QYTD01000003.1 Protein Homology CDS 410635 411471 . - 0 ID=cds-WP_000192910.1;Parent=gene-D5F94_RS03870;Dbxref=GenBank:WP_000192910.1;Name=WP_000192910.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192906.1;locus_tag=D5F94_RS03870;product=NAD kinase;protein_id=WP_000192910.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 411446 412117 . - . ID=gene-D5F94_RS03875;Name=D5F94_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03875;old_locus_tag=D5F94_03875 NZ_QYTD01000003.1 Protein Homology CDS 411446 412117 . - 0 ID=cds-WP_000061344.1;Parent=gene-D5F94_RS03875;Dbxref=GenBank:WP_000061344.1;Name=WP_000061344.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771989.1;locus_tag=D5F94_RS03875;product=GTP pyrophosphokinase;protein_id=WP_000061344.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 412227 412799 . + . ID=gene-D5F94_RS03880;Name=D5F94_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03880;old_locus_tag=D5F94_03880 NZ_QYTD01000003.1 Protein Homology CDS 412227 412799 . + 0 ID=cds-WP_000149079.1;Parent=gene-D5F94_RS03880;Dbxref=GenBank:WP_000149079.1;Name=WP_000149079.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480803.1;locus_tag=D5F94_RS03880;product=CYTH domain-containing protein;protein_id=WP_000149079.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 412976 413950 . + . ID=gene-D5F94_RS03885;Name=D5F94_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03885;old_locus_tag=D5F94_03885 NZ_QYTD01000003.1 Protein Homology CDS 412976 413950 . + 0 ID=cds-WP_000840698.1;Parent=gene-D5F94_RS03885;Dbxref=GenBank:WP_000840698.1;Name=WP_000840698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840703.1;locus_tag=D5F94_RS03885;product=ribose-phosphate diphosphokinase;protein_id=WP_000840698.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 413954 415069 . + . ID=gene-D5F94_RS03890;Name=D5F94_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03890;old_locus_tag=D5F94_03890 NZ_QYTD01000003.1 Protein Homology CDS 413954 415069 . + 0 ID=cds-WP_000639608.1;Parent=gene-D5F94_RS03890;Dbxref=GenBank:WP_000639608.1;Name=WP_000639608.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639599.1;locus_tag=D5F94_RS03890;product=cysteine desulfurase family protein;protein_id=WP_000639608.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 415071 415418 . + . ID=gene-D5F94_RS03895;Name=D5F94_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03895;old_locus_tag=D5F94_03895 NZ_QYTD01000003.1 Protein Homology CDS 415071 415418 . + 0 ID=cds-WP_000863499.1;Parent=gene-D5F94_RS03895;Dbxref=GenBank:WP_000863499.1;Name=WP_000863499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480804.1;locus_tag=D5F94_RS03895;product=DUF1831 domain-containing protein;protein_id=WP_000863499.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 415573 416211 . + . ID=gene-D5F94_RS03900;Name=D5F94_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03900;old_locus_tag=D5F94_03900 NZ_QYTD01000003.1 Protein Homology CDS 415573 416211 . + 0 ID=cds-WP_000605175.1;Parent=gene-D5F94_RS03900;Dbxref=GenBank:WP_000605175.1;Name=WP_000605175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771355.1;locus_tag=D5F94_RS03900;product=redox-sensing transcriptional repressor Rex;protein_id=WP_000605175.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 416224 416904 . - . ID=gene-D5F94_RS03905;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=D5F94_RS03905;old_locus_tag=D5F94_03905 NZ_QYTD01000003.1 Protein Homology CDS 416224 416904 . - 0 ID=cds-WP_000274751.1;Parent=gene-D5F94_RS03905;Dbxref=GenBank:WP_000274751.1;Name=WP_000274751.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274751.1;locus_tag=D5F94_RS03905;product=RadC family protein;protein_id=WP_000274751.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 417000 418133 . - . ID=gene-D5F94_RS03910;Name=D5F94_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03910;old_locus_tag=D5F94_03910 NZ_QYTD01000003.1 Protein Homology CDS 417000 418133 . - 0 ID=cds-WP_000667246.1;Parent=gene-D5F94_RS03910;Dbxref=GenBank:WP_000667246.1;Name=WP_000667246.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667240.1;locus_tag=D5F94_RS03910;product=AI-2E family transporter;protein_id=WP_000667246.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 418224 419663 . - . ID=gene-D5F94_RS03915;Name=D5F94_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03915;old_locus_tag=D5F94_03915 NZ_QYTD01000003.1 Protein Homology CDS 418224 419663 . - 0 ID=cds-WP_180383431.1;Parent=gene-D5F94_RS03915;Dbxref=GenBank:WP_180383431.1;Name=WP_180383431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989488.1;locus_tag=D5F94_RS03915;product=6-phospho-beta-glucosidase;protein_id=WP_180383431.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 419823 420437 . - . ID=gene-D5F94_RS03920;Name=D5F94_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03920;old_locus_tag=D5F94_03920 NZ_QYTD01000003.1 Protein Homology CDS 419823 420437 . - 0 ID=cds-WP_016502912.1;Parent=gene-D5F94_RS03920;Dbxref=GenBank:WP_016502912.1;Name=WP_016502912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895129.1;locus_tag=D5F94_RS03920;product=SGNH/GDSL hydrolase family protein;protein_id=WP_016502912.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 420538 421359 . - . ID=gene-D5F94_RS03925;Name=D5F94_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03925;old_locus_tag=D5F94_03925 NZ_QYTD01000003.1 Protein Homology CDS 420538 421359 . - 0 ID=cds-WP_016480806.1;Parent=gene-D5F94_RS03925;Dbxref=GenBank:WP_016480806.1;Name=WP_016480806.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593351.1;locus_tag=D5F94_RS03925;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_016480806.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 421542 421721 . - . ID=gene-D5F94_RS10775;Name=D5F94_RS10775;end_range=421721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10775;old_locus_tag=D5F94_03930;partial=true;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 421542 421721 . - 0 ID=cds-D5F94_RS10775;Parent=gene-D5F94_RS10775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=421721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894089.1;locus_tag=D5F94_RS10775;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 421983 422912 . + . ID=gene-D5F94_RS03935;Name=D5F94_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03935;old_locus_tag=D5F94_03935 NZ_QYTD01000003.1 Protein Homology CDS 421983 422912 . + 0 ID=cds-WP_016480807.1;Parent=gene-D5F94_RS03935;Dbxref=GenBank:WP_016480807.1;Name=WP_016480807.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086432.1;locus_tag=D5F94_RS03935;product=helix-turn-helix transcriptional regulator;protein_id=WP_016480807.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 422969 424501 . - . ID=gene-D5F94_RS03940;Name=D5F94_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03940;old_locus_tag=D5F94_03940 NZ_QYTD01000003.1 Protein Homology CDS 422969 424501 . - 0 ID=cds-WP_016480808.1;Parent=gene-D5F94_RS03940;Dbxref=GenBank:WP_016480808.1;Name=WP_016480808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646779.1;locus_tag=D5F94_RS03940;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=WP_016480808.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 424610 425683 . - . ID=gene-D5F94_RS03945;Name=D5F94_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03945;old_locus_tag=D5F94_03945 NZ_QYTD01000003.1 Protein Homology CDS 424610 425683 . - 0 ID=cds-WP_016480809.1;Parent=gene-D5F94_RS03945;Dbxref=GenBank:WP_016480809.1;Name=WP_016480809.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632028.1;locus_tag=D5F94_RS03945;product=ABC transporter substrate-binding protein;protein_id=WP_016480809.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 425676 426452 . - . ID=gene-D5F94_RS03950;Name=D5F94_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03950;old_locus_tag=D5F94_03950 NZ_QYTD01000003.1 Protein Homology CDS 425676 426452 . - 0 ID=cds-WP_000712712.1;Parent=gene-D5F94_RS03950;Dbxref=GenBank:WP_000712712.1;Name=WP_000712712.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712704.1;locus_tag=D5F94_RS03950;product=ABC transporter permease;protein_id=WP_000712712.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 426449 427243 . - . ID=gene-D5F94_RS03955;Name=D5F94_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03955;old_locus_tag=D5F94_03955 NZ_QYTD01000003.1 Protein Homology CDS 426449 427243 . - 0 ID=cds-WP_000753812.1;Parent=gene-D5F94_RS03955;Dbxref=GenBank:WP_000753812.1;Name=WP_000753812.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632030.1;locus_tag=D5F94_RS03955;product=ABC transporter permease;protein_id=WP_000753812.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 427227 428381 . - . ID=gene-D5F94_RS03960;Name=D5F94_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03960;old_locus_tag=D5F94_03960 NZ_QYTD01000003.1 Protein Homology CDS 427227 428381 . - 0 ID=cds-WP_000184098.1;Parent=gene-D5F94_RS03960;Dbxref=GenBank:WP_000184098.1;Name=WP_000184098.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184488.1;locus_tag=D5F94_RS03960;product=ABC transporter ATP-binding protein;protein_id=WP_000184098.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 428430 429332 . - . ID=gene-D5F94_RS03965;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=D5F94_RS03965;old_locus_tag=D5F94_03965 NZ_QYTD01000003.1 Protein Homology CDS 428430 429332 . - 0 ID=cds-WP_000598027.1;Parent=gene-D5F94_RS03965;Dbxref=GenBank:WP_000598027.1;Name=WP_000598027.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650088.1;locus_tag=D5F94_RS03965;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000598027.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 429476 429964 . - . ID=gene-D5F94_RS03970;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=D5F94_RS03970;old_locus_tag=D5F94_03970 NZ_QYTD01000003.1 Protein Homology CDS 429476 429964 . - 0 ID=cds-WP_124749388.1;Parent=gene-D5F94_RS03970;Dbxref=GenBank:WP_124749388.1;Name=WP_124749388.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214503.1;locus_tag=D5F94_RS03970;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_124749388.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 429961 430323 . - . ID=gene-D5F94_RS03975;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=D5F94_RS03975;old_locus_tag=D5F94_03975 NZ_QYTD01000003.1 Protein Homology CDS 429961 430323 . - 0 ID=cds-WP_000358072.1;Parent=gene-D5F94_RS03975;Dbxref=GenBank:WP_000358072.1;Name=WP_000358072.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358072.1;locus_tag=D5F94_RS03975;product=dihydroneopterin aldolase;protein_id=WP_000358072.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 430325 431128 . - . ID=gene-D5F94_RS03980;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D5F94_RS03980;old_locus_tag=D5F94_03980 NZ_QYTD01000003.1 Protein Homology CDS 430325 431128 . - 0 ID=cds-WP_000690156.1;Parent=gene-D5F94_RS03980;Dbxref=GenBank:WP_000690156.1;Name=WP_000690156.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632031.1;locus_tag=D5F94_RS03980;product=dihydropteroate synthase;protein_id=WP_000690156.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 431132 431695 . - . ID=gene-D5F94_RS03985;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=D5F94_RS03985;old_locus_tag=D5F94_03985 NZ_QYTD01000003.1 Protein Homology CDS 431132 431695 . - 0 ID=cds-WP_001133587.1;Parent=gene-D5F94_RS03985;Dbxref=GenBank:WP_001133587.1;Name=WP_001133587.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133588.1;locus_tag=D5F94_RS03985;product=GTP cyclohydrolase I FolE;protein_id=WP_001133587.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 431714 432976 . - . ID=gene-D5F94_RS03990;Name=D5F94_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS03990;old_locus_tag=D5F94_03990 NZ_QYTD01000003.1 Protein Homology CDS 431714 432976 . - 0 ID=cds-WP_000222112.1;Parent=gene-D5F94_RS03990;Dbxref=GenBank:WP_000222112.1;Name=WP_000222112.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222122.1;locus_tag=D5F94_RS03990;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_000222112.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 432978 433865 . - . ID=gene-D5F94_RS03995;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D5F94_RS03995;old_locus_tag=D5F94_03995 NZ_QYTD01000003.1 Protein Homology CDS 432978 433865 . - 0 ID=cds-WP_016502914.1;Parent=gene-D5F94_RS03995;Dbxref=GenBank:WP_016502914.1;Name=WP_016502914.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767746.1;locus_tag=D5F94_RS03995;product=EamA family transporter RarD;protein_id=WP_016502914.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 433852 434718 . - . ID=gene-D5F94_RS04000;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=D5F94_RS04000;old_locus_tag=D5F94_04000 NZ_QYTD01000003.1 Protein Homology CDS 433852 434718 . - 0 ID=cds-WP_001220328.1;Parent=gene-D5F94_RS04000;Dbxref=GenBank:WP_001220328.1;Name=WP_001220328.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767626.1;locus_tag=D5F94_RS04000;product=homoserine kinase;protein_id=WP_001220328.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 434720 436003 . - . ID=gene-D5F94_RS04005;Name=D5F94_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04005;old_locus_tag=D5F94_04005 NZ_QYTD01000003.1 Protein Homology CDS 434720 436003 . - 0 ID=cds-WP_086163354.1;Parent=gene-D5F94_RS04005;Dbxref=GenBank:WP_086163354.1;Name=WP_086163354.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480813.1;locus_tag=D5F94_RS04005;product=homoserine dehydrogenase;protein_id=WP_086163354.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 436227 437066 . + . ID=gene-D5F94_RS04010;Name=D5F94_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04010;old_locus_tag=D5F94_04010 NZ_QYTD01000003.1 Protein Homology CDS 436227 437066 . + 0 ID=cds-WP_260424800.1;Parent=gene-D5F94_RS04010;Dbxref=GenBank:WP_260424800.1;Name=WP_260424800.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003099793.1;locus_tag=D5F94_RS04010;product=polysaccharide deacetylase family protein;protein_id=WP_260424800.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 437089 438636 . - . ID=gene-D5F94_RS04015;Name=D5F94_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04015;old_locus_tag=D5F94_04015 NZ_QYTD01000003.1 Protein Homology CDS 437089 438636 . - 0 ID=cds-WP_016502917.1;Parent=gene-D5F94_RS04015;Dbxref=GenBank:WP_016502917.1;Name=WP_016502917.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037479.1;locus_tag=D5F94_RS04015;product=BCCT family transporter;protein_id=WP_016502917.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 438779 440155 . - . ID=gene-D5F94_RS04025;Name=D5F94_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04025;old_locus_tag=D5F94_04025 NZ_QYTD01000003.1 Protein Homology CDS 438779 440155 . - 0 ID=cds-WP_124749392.1;Parent=gene-D5F94_RS04025;Dbxref=GenBank:WP_124749392.1;Name=WP_124749392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480816.1;locus_tag=D5F94_RS04025;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_124749392.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 440229 441236 . - . ID=gene-D5F94_RS04030;Name=D5F94_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04030;old_locus_tag=D5F94_04030 NZ_QYTD01000003.1 Protein Homology CDS 440229 441236 . - 0 ID=cds-WP_000897651.1;Parent=gene-D5F94_RS04030;Dbxref=GenBank:WP_000897651.1;Name=WP_000897651.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000897649.1;locus_tag=D5F94_RS04030;product=YeiH family protein;protein_id=WP_000897651.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 441344 442030 . - . ID=gene-D5F94_RS04035;Name=D5F94_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04035;old_locus_tag=D5F94_04035 NZ_QYTD01000003.1 Protein Homology CDS 441344 442030 . - 0 ID=cds-WP_000714060.1;Parent=gene-D5F94_RS04035;Dbxref=GenBank:WP_000714060.1;Name=WP_000714060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714057.1;locus_tag=D5F94_RS04035;product=hypothetical protein;protein_id=WP_000714060.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 442509 443792 . + . ID=gene-D5F94_RS04040;Name=D5F94_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04040;old_locus_tag=D5F94_04040 NZ_QYTD01000003.1 Protein Homology CDS 442509 443792 . + 0 ID=cds-WP_180383576.1;Parent=gene-D5F94_RS04040;Dbxref=GenBank:WP_180383576.1;Name=WP_180383576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644904.1;locus_tag=D5F94_RS04040;product=kinase;protein_id=WP_180383576.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 443947 444186 . + . ID=gene-D5F94_RS04045;Name=D5F94_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04045;old_locus_tag=D5F94_04045 NZ_QYTD01000003.1 Protein Homology CDS 443947 444186 . + 0 ID=cds-WP_001931014.1;Parent=gene-D5F94_RS04045;Dbxref=GenBank:WP_001931014.1;Name=WP_001931014.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001869992.1;locus_tag=D5F94_RS04045;product=helix-turn-helix transcriptional regulator;protein_id=WP_001931014.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 444286 444819 . + . ID=gene-D5F94_RS04050;Name=D5F94_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04050;old_locus_tag=D5F94_04050 NZ_QYTD01000003.1 Protein Homology CDS 444286 444819 . + 0 ID=cds-WP_086163360.1;Parent=gene-D5F94_RS04050;Dbxref=GenBank:WP_086163360.1;Name=WP_086163360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768380.1;locus_tag=D5F94_RS04050;product=DUF3278 domain-containing protein;protein_id=WP_086163360.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 444895 445389 . - . ID=gene-D5F94_RS04055;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=D5F94_RS04055;old_locus_tag=D5F94_04055 NZ_QYTD01000003.1 Protein Homology CDS 444895 445389 . - 0 ID=cds-WP_000206525.1;Parent=gene-D5F94_RS04055;Dbxref=GenBank:WP_000206525.1;Name=WP_000206525.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206548.1;locus_tag=D5F94_RS04055;product=thiol peroxidase;protein_id=WP_000206525.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 445462 446121 . - . ID=gene-D5F94_RS04060;Name=D5F94_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04060;old_locus_tag=D5F94_04060 NZ_QYTD01000003.1 Protein Homology CDS 445462 446121 . - 0 ID=cds-WP_016502922.1;Parent=gene-D5F94_RS04060;Dbxref=GenBank:WP_016502922.1;Name=WP_016502922.1;Ontology_term=GO:0006307;gbkey=CDS;go_process=DNA alkylation repair|0006307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362921.1;locus_tag=D5F94_RS04060;product=DNA alkylation repair protein;protein_id=WP_016502922.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 446121 446885 . - . ID=gene-D5F94_RS04065;Name=D5F94_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04065;old_locus_tag=D5F94_04065 NZ_QYTD01000003.1 Protein Homology CDS 446121 446885 . - 0 ID=cds-WP_086163362.1;Parent=gene-D5F94_RS04065;Dbxref=GenBank:WP_086163362.1;Name=WP_086163362.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348145.1;locus_tag=D5F94_RS04065;product=HAD-IIB family hydrolase;protein_id=WP_086163362.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 446890 447531 . - . ID=gene-D5F94_RS04070;Name=D5F94_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04070;old_locus_tag=D5F94_04070 NZ_QYTD01000003.1 Protein Homology CDS 446890 447531 . - 0 ID=cds-WP_124749394.1;Parent=gene-D5F94_RS04070;Dbxref=GenBank:WP_124749394.1;Name=WP_124749394.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253259.1;locus_tag=D5F94_RS04070;product=TrkA C-terminal domain-containing protein;protein_id=WP_124749394.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 447695 448246 . - . ID=gene-D5F94_RS04075;Name=D5F94_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04075;old_locus_tag=D5F94_04075 NZ_QYTD01000003.1 Protein Homology CDS 447695 448246 . - 0 ID=cds-WP_000431296.1;Parent=gene-D5F94_RS04075;Dbxref=GenBank:WP_000431296.1;Name=WP_000431296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649823.1;locus_tag=D5F94_RS04075;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_000431296.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 448268 448465 . - . ID=gene-D5F94_RS04080;Name=D5F94_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04080;old_locus_tag=D5F94_04080 NZ_QYTD01000003.1 Protein Homology CDS 448268 448465 . - 0 ID=cds-WP_001288036.1;Parent=gene-D5F94_RS04080;Dbxref=GenBank:WP_001288036.1;Name=WP_001288036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288036.1;locus_tag=D5F94_RS04080;product=CsbD family protein;protein_id=WP_001288036.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 448512 449054 . - . ID=gene-D5F94_RS04085;Name=D5F94_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04085;old_locus_tag=D5F94_04085 NZ_QYTD01000003.1 Protein Homology CDS 448512 449054 . - 0 ID=cds-WP_086163364.1;Parent=gene-D5F94_RS04085;Dbxref=GenBank:WP_086163364.1;Name=WP_086163364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632041.1;locus_tag=D5F94_RS04085;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_086163364.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 449110 449304 . - . ID=gene-D5F94_RS04090;Name=D5F94_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04090;old_locus_tag=D5F94_04090 NZ_QYTD01000003.1 Protein Homology CDS 449110 449304 . - 0 ID=cds-WP_001288927.1;Parent=gene-D5F94_RS04090;Dbxref=GenBank:WP_001288927.1;Name=WP_001288927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288926.1;locus_tag=D5F94_RS04090;product=DUF2273 domain-containing protein;protein_id=WP_001288927.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 449314 449895 . - . ID=gene-D5F94_RS04095;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=D5F94_RS04095;old_locus_tag=D5F94_04095 NZ_QYTD01000003.1 Protein Homology CDS 449314 449895 . - 0 ID=cds-WP_086163365.1;Parent=gene-D5F94_RS04095;Dbxref=GenBank:WP_086163365.1;Name=WP_086163365.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285291.1;locus_tag=D5F94_RS04095;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_086163365.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 449910 450158 . - . ID=gene-D5F94_RS04100;Name=D5F94_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04100;old_locus_tag=D5F94_04100 NZ_QYTD01000003.1 Protein Homology CDS 449910 450158 . - 0 ID=cds-WP_000053321.1;Parent=gene-D5F94_RS04100;Dbxref=GenBank:WP_000053321.1;Name=WP_000053321.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053322.1;locus_tag=D5F94_RS04100;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000053321.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 450206 450451 . - . ID=gene-D5F94_RS04105;Name=D5F94_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04105;old_locus_tag=D5F94_04105 NZ_QYTD01000003.1 Protein Homology CDS 450206 450451 . - 0 ID=cds-WP_086163366.1;Parent=gene-D5F94_RS04105;Dbxref=GenBank:WP_086163366.1;Name=WP_086163366.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523009.1;locus_tag=D5F94_RS04105;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_086163366.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 450863 453142 . - . ID=gene-D5F94_RS04110;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=D5F94_RS04110;old_locus_tag=D5F94_04110 NZ_QYTD01000003.1 Protein Homology CDS 450863 453142 . - 0 ID=cds-WP_124749396.1;Parent=gene-D5F94_RS04110;Dbxref=GenBank:WP_124749396.1;Name=WP_124749396.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068642.1;locus_tag=D5F94_RS04110;product=DNA helicase PcrA;protein_id=WP_124749396.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 453248 453634 . - . ID=gene-D5F94_RS04115;Name=D5F94_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04115;old_locus_tag=D5F94_04115 NZ_QYTD01000003.1 Protein Homology CDS 453248 453634 . - 0 ID=cds-WP_000671265.1;Parent=gene-D5F94_RS04115;Dbxref=GenBank:WP_000671265.1;Name=WP_000671265.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480824.1;locus_tag=D5F94_RS04115;product=PaaI family thioesterase;protein_id=WP_000671265.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 453767 455092 . - . ID=gene-D5F94_RS04120;Name=D5F94_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04120;old_locus_tag=D5F94_04120 NZ_QYTD01000003.1 Protein Homology CDS 453767 455092 . - 0 ID=cds-WP_000174081.1;Parent=gene-D5F94_RS04120;Dbxref=GenBank:WP_000174081.1;Name=WP_000174081.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020480284.1;locus_tag=D5F94_RS04120;product=uracil-xanthine permease family protein;protein_id=WP_000174081.1;transl_table=11 NZ_QYTD01000003.1 cmsearch riboswitch 455400 455532 . + . ID=id-NZ_QYTD01000003.1:455400..455532;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000003.1 RefSeq gene 455690 457036 . + . ID=gene-D5F94_RS04125;Name=D5F94_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04125;old_locus_tag=D5F94_04125 NZ_QYTD01000003.1 Protein Homology CDS 455690 457036 . + 0 ID=cds-WP_086163368.1;Parent=gene-D5F94_RS04125;Dbxref=GenBank:WP_086163368.1;Name=WP_086163368.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956728.1;locus_tag=D5F94_RS04125;product=alanine/glycine:cation symporter family protein;protein_id=WP_086163368.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 457100 458335 . + . ID=gene-D5F94_RS04130;Name=D5F94_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04130;old_locus_tag=D5F94_04130 NZ_QYTD01000003.1 Protein Homology CDS 457100 458335 . + 0 ID=cds-WP_000235899.1;Parent=gene-D5F94_RS04130;Dbxref=GenBank:WP_000235899.1;Name=WP_000235899.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643783.1;locus_tag=D5F94_RS04130;product=cation diffusion facilitator family transporter;protein_id=WP_000235899.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 458494 458886 . + . ID=gene-D5F94_RS04135;Name=D5F94_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04135;old_locus_tag=D5F94_04135 NZ_QYTD01000003.1 Protein Homology CDS 458494 458886 . + 0 ID=cds-WP_086163369.1;Parent=gene-D5F94_RS04135;Dbxref=GenBank:WP_086163369.1;Name=WP_086163369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647124.1;locus_tag=D5F94_RS04135;product=CidA/LrgA family protein;protein_id=WP_086163369.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 458867 459562 . + . ID=gene-D5F94_RS04140;Name=D5F94_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04140;old_locus_tag=D5F94_04140 NZ_QYTD01000003.1 Protein Homology CDS 458867 459562 . + 0 ID=cds-WP_000224245.1;Parent=gene-D5F94_RS04140;Dbxref=GenBank:WP_000224245.1;Name=WP_000224245.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632044.1;locus_tag=D5F94_RS04140;product=LrgB family protein;protein_id=WP_000224245.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 459631 460254 . + . ID=gene-D5F94_RS04145;Name=D5F94_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04145;old_locus_tag=D5F94_04145 NZ_QYTD01000003.1 Protein Homology CDS 459631 460254 . + 0 ID=cds-WP_000612517.1;Parent=gene-D5F94_RS04145;Dbxref=GenBank:WP_000612517.1;Name=WP_000612517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612522.1;locus_tag=D5F94_RS04145;product=DUF3862 domain-containing protein;protein_id=WP_000612517.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 460539 460817 . + . ID=gene-D5F94_RS04150;Name=D5F94_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04150;old_locus_tag=D5F94_04150 NZ_QYTD01000003.1 Protein Homology CDS 460539 460817 . + 0 ID=cds-WP_257638799.1;Parent=gene-D5F94_RS04150;Dbxref=GenBank:WP_257638799.1;Name=WP_257638799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025695.7;locus_tag=D5F94_RS04150;product=DUF4393 domain-containing protein;protein_id=WP_257638799.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 461203 461902 . + . ID=gene-D5F94_RS04160;Name=D5F94_RS04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS04160;old_locus_tag=D5F94_04160;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 461203 461902 . + 0 ID=cds-D5F94_RS04160;Parent=gene-D5F94_RS04160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013794263.1;locus_tag=D5F94_RS04160;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 461957 462565 . + . ID=gene-D5F94_RS04165;Name=D5F94_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04165;old_locus_tag=D5F94_04165 NZ_QYTD01000003.1 Protein Homology CDS 461957 462565 . + 0 ID=cds-WP_086163370.1;Parent=gene-D5F94_RS04165;Dbxref=GenBank:WP_086163370.1;Name=WP_086163370.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438039.1;locus_tag=D5F94_RS04165;product=CD20-like domain-containing protein;protein_id=WP_086163370.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 462693 463722 . + . ID=gene-D5F94_RS04175;Name=D5F94_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS04175;old_locus_tag=D5F94_04175;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 462693 463722 . + 0 ID=cds-D5F94_RS04175;Parent=gene-D5F94_RS04175;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323187.1;locus_tag=D5F94_RS04175;product=site-specific integrase;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 463807 463878 . - . ID=gene-D5F94_RS04180;Name=D5F94_RS04180;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS04180;old_locus_tag=D5F94_04180 NZ_QYTD01000003.1 tRNAscan-SE tRNA 463807 463878 . - . ID=rna-D5F94_RS04180;Parent=gene-D5F94_RS04180;anticodon=(pos:complement(463843..463845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04180;product=tRNA-Arg NZ_QYTD01000003.1 tRNAscan-SE exon 463807 463878 . - . ID=exon-D5F94_RS04180-1;Parent=rna-D5F94_RS04180;anticodon=(pos:complement(463843..463845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04180;product=tRNA-Arg NZ_QYTD01000003.1 RefSeq gene 463951 465153 . - . ID=gene-D5F94_RS04185;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=D5F94_RS04185;old_locus_tag=D5F94_04185 NZ_QYTD01000003.1 Protein Homology CDS 463951 465153 . - 0 ID=cds-WP_001001614.1;Parent=gene-D5F94_RS04185;Dbxref=GenBank:WP_001001614.1;Name=WP_001001614.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002997242.1;locus_tag=D5F94_RS04185;product=30S ribosomal protein S1;protein_id=WP_001001614.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 465279 465350 . - . ID=gene-D5F94_RS04190;Name=D5F94_RS04190;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS04190;old_locus_tag=D5F94_04190 NZ_QYTD01000003.1 tRNAscan-SE tRNA 465279 465350 . - . ID=rna-D5F94_RS04190;Parent=gene-D5F94_RS04190;anticodon=(pos:complement(465316..465318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04190;product=tRNA-Gln NZ_QYTD01000003.1 tRNAscan-SE exon 465279 465350 . - . ID=exon-D5F94_RS04190-1;Parent=rna-D5F94_RS04190;anticodon=(pos:complement(465316..465318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04190;product=tRNA-Gln NZ_QYTD01000003.1 RefSeq gene 465356 465436 . - . ID=gene-D5F94_RS04195;Name=D5F94_RS04195;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS04195;old_locus_tag=D5F94_04195 NZ_QYTD01000003.1 tRNAscan-SE tRNA 465356 465436 . - . ID=rna-D5F94_RS04195;Parent=gene-D5F94_RS04195;anticodon=(pos:complement(465400..465402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04195;product=tRNA-Tyr NZ_QYTD01000003.1 tRNAscan-SE exon 465356 465436 . - . ID=exon-D5F94_RS04195-1;Parent=rna-D5F94_RS04195;anticodon=(pos:complement(465400..465402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS04195;product=tRNA-Tyr NZ_QYTD01000003.1 RefSeq gene 465497 465727 . - . ID=gene-D5F94_RS04200;Name=D5F94_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04200;old_locus_tag=D5F94_04200 NZ_QYTD01000003.1 Protein Homology CDS 465497 465727 . - 0 ID=cds-WP_000037098.1;Parent=gene-D5F94_RS04200;Dbxref=GenBank:WP_000037098.1;Name=WP_000037098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001870505.1;locus_tag=D5F94_RS04200;product=DUF2969 domain-containing protein;protein_id=WP_000037098.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 465811 466833 . - . ID=gene-D5F94_RS04205;Name=D5F94_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04205;old_locus_tag=D5F94_04205 NZ_QYTD01000003.1 Protein Homology CDS 465811 466833 . - 0 ID=cds-WP_086163372.1;Parent=gene-D5F94_RS04205;Dbxref=GenBank:WP_086163372.1;Name=WP_086163372.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961903.1;locus_tag=D5F94_RS04205;product=branched-chain amino acid aminotransferase;protein_id=WP_086163372.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 466947 469406 . - . ID=gene-D5F94_RS04210;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=D5F94_RS04210;old_locus_tag=D5F94_04210 NZ_QYTD01000003.1 Protein Homology CDS 466947 469406 . - 0 ID=cds-WP_000065534.1;Parent=gene-D5F94_RS04210;Dbxref=GenBank:WP_000065534.1;Name=WP_000065534.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065524.1;locus_tag=D5F94_RS04210;product=DNA topoisomerase IV subunit A;protein_id=WP_000065534.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 469540 471489 . - . ID=gene-D5F94_RS04215;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=D5F94_RS04215;old_locus_tag=D5F94_04215 NZ_QYTD01000003.1 Protein Homology CDS 469540 471489 . - 0 ID=cds-WP_180383574.1;Parent=gene-D5F94_RS04215;Dbxref=GenBank:WP_180383574.1;Name=WP_180383574.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632049.1;locus_tag=D5F94_RS04215;product=DNA topoisomerase IV subunit B;protein_id=WP_180383574.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 471603 472241 . + . ID=gene-D5F94_RS04220;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=D5F94_RS04220;old_locus_tag=D5F94_04220 NZ_QYTD01000003.1 Protein Homology CDS 471603 472241 . + 0 ID=cds-WP_086163374.1;Parent=gene-D5F94_RS04220;Dbxref=GenBank:WP_086163374.1;Name=WP_086163374.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632050.1;locus_tag=D5F94_RS04220;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_086163374.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 472307 472960 . - . ID=gene-D5F94_RS04225;Name=D5F94_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04225;old_locus_tag=D5F94_04225 NZ_QYTD01000003.1 Protein Homology CDS 472307 472960 . - 0 ID=cds-WP_000682955.1;Parent=gene-D5F94_RS04225;Dbxref=GenBank:WP_000682955.1;Name=WP_000682955.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643623.1;locus_tag=D5F94_RS04225;product=uracil-DNA glycosylase;protein_id=WP_000682955.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 473059 473544 . - . ID=gene-D5F94_RS04230;Name=D5F94_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04230;old_locus_tag=D5F94_04230 NZ_QYTD01000003.1 Protein Homology CDS 473059 473544 . - 0 ID=cds-WP_001209318.1;Parent=gene-D5F94_RS04230;Dbxref=GenBank:WP_001209318.1;Name=WP_001209318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644630.1;locus_tag=D5F94_RS04230;product=hypothetical protein;protein_id=WP_001209318.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 473658 474899 . - . ID=gene-D5F94_RS04235;Name=neuA;gbkey=Gene;gene=neuA;gene_biotype=protein_coding;locus_tag=D5F94_RS04235;old_locus_tag=D5F94_04235 NZ_QYTD01000003.1 Protein Homology CDS 473658 474899 . - 0 ID=cds-WP_000802346.1;Parent=gene-D5F94_RS04235;Dbxref=GenBank:WP_000802346.1;Name=WP_000802346.1;gbkey=CDS;gene=neuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000802346.1;locus_tag=D5F94_RS04235;product=N-acylneuraminate cytidylyltransferase;protein_id=WP_000802346.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 474910 475539 . - . ID=gene-D5F94_RS04240;Name=D5F94_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04240;old_locus_tag=D5F94_04240 NZ_QYTD01000003.1 Protein Homology CDS 474910 475539 . - 0 ID=cds-WP_000727597.1;Parent=gene-D5F94_RS04240;Dbxref=GenBank:WP_000727597.1;Name=WP_000727597.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646802.1;locus_tag=D5F94_RS04240;product=acetyltransferase;protein_id=WP_000727597.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 475536 476690 . - . ID=gene-D5F94_RS04245;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=D5F94_RS04245;old_locus_tag=D5F94_04245 NZ_QYTD01000003.1 Protein Homology CDS 475536 476690 . - 0 ID=cds-WP_000717643.1;Parent=gene-D5F94_RS04245;Dbxref=GenBank:WP_000717643.1;Name=WP_000717643.1;Ontology_term=GO:0006047,GO:0008761;gbkey=CDS;gene=neuC;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=UDP-N-acetylglucosamine metabolic process|0006047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644210.1;locus_tag=D5F94_RS04245;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000717643.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 476767 477792 . - . ID=gene-D5F94_RS04250;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=D5F94_RS04250;old_locus_tag=D5F94_04250 NZ_QYTD01000003.1 Protein Homology CDS 476767 477792 . - 0 ID=cds-WP_000262522.1;Parent=gene-D5F94_RS04250;Dbxref=GenBank:WP_000262522.1;Name=WP_000262522.1;Ontology_term=GO:0016051,GO:0003824;gbkey=CDS;gene=neuB;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262516.1;locus_tag=D5F94_RS04250;product=N-acetylneuraminate synthase;protein_id=WP_000262522.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 477792 479192 . - . ID=gene-D5F94_RS04255;Name=D5F94_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04255;old_locus_tag=D5F94_04255 NZ_QYTD01000003.1 Protein Homology CDS 477792 479192 . - 0 ID=cds-WP_017647707.1;Parent=gene-D5F94_RS04255;Dbxref=GenBank:WP_017647707.1;Name=WP_017647707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093048.1;locus_tag=D5F94_RS04255;product=oligosaccharide flippase family protein;protein_id=WP_017647707.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 479189 480145 . - . ID=gene-D5F94_RS04260;Name=D5F94_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04260;old_locus_tag=D5F94_04260 NZ_QYTD01000003.1 Protein Homology CDS 479189 480145 . - 0 ID=cds-WP_050197095.1;Parent=gene-D5F94_RS04260;Dbxref=GenBank:WP_050197095.1;Name=WP_050197095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181005.1;locus_tag=D5F94_RS04260;product=glycosyltransferase family 52;protein_id=WP_050197095.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 480229 481176 . - . ID=gene-D5F94_RS04265;Name=D5F94_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04265;old_locus_tag=D5F94_04265 NZ_QYTD01000003.1 Protein Homology CDS 480229 481176 . - 0 ID=cds-WP_000591737.1;Parent=gene-D5F94_RS04265;Dbxref=GenBank:WP_000591737.1;Name=WP_000591737.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591736.1;locus_tag=D5F94_RS04265;product=glycosyltransferase family 2 protein;protein_id=WP_000591737.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 481210 482178 . - . ID=gene-D5F94_RS04270;Name=D5F94_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04270;old_locus_tag=D5F94_04270 NZ_QYTD01000003.1 Protein Homology CDS 481210 482178 . - 0 ID=cds-WP_000660893.1;Parent=gene-D5F94_RS04270;Dbxref=GenBank:WP_000660893.1;Name=WP_000660893.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660896.1;locus_tag=D5F94_RS04270;product=glycosyltransferase family 2 protein;protein_id=WP_000660893.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 482175 483320 . - . ID=gene-D5F94_RS04275;Name=D5F94_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04275;old_locus_tag=D5F94_04275 NZ_QYTD01000003.1 Protein Homology CDS 482175 483320 . - 0 ID=cds-WP_001233887.1;Parent=gene-D5F94_RS04275;Dbxref=GenBank:WP_001233887.1;Name=WP_001233887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233887.1;locus_tag=D5F94_RS04275;product=capsule biosynthesis protein CapK;protein_id=WP_001233887.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 483317 483791 . - . ID=gene-D5F94_RS04280;Name=D5F94_RS04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS04280;old_locus_tag=D5F94_04280;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 483317 483791 . - 0 ID=cds-D5F94_RS04280;Parent=gene-D5F94_RS04280;Note=frameshifted;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578449.1;locus_tag=D5F94_RS04280;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 483791 484240 . - . ID=gene-D5F94_RS04285;Name=pssD;gbkey=Gene;gene=pssD;gene_biotype=protein_coding;locus_tag=D5F94_RS04285;old_locus_tag=D5F94_04285 NZ_QYTD01000003.1 Protein Homology CDS 483791 484240 . - 0 ID=cds-WP_000686634.1;Parent=gene-D5F94_RS04285;Dbxref=GenBank:WP_000686634.1;Name=WP_000686634.1;Ontology_term=GO:0016740;gbkey=CDS;gene=pssD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650132.1;locus_tag=D5F94_RS04285;product=PssD/Cps14F family polysaccharide biosynthesis glycosyltransferase;protein_id=WP_000686634.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 484264 485652 . - . ID=gene-D5F94_RS04290;Name=D5F94_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04290;old_locus_tag=D5F94_04290 NZ_QYTD01000003.1 Protein Homology CDS 484264 485652 . - 0 ID=cds-WP_017647706.1;Parent=gene-D5F94_RS04290;Dbxref=GenBank:WP_017647706.1;Name=WP_017647706.1;Ontology_term=GO:0016740,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659574.1;locus_tag=D5F94_RS04290;product=sugar transferase;protein_id=WP_017647706.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 485665 486363 . - . ID=gene-D5F94_RS04295;Name=D5F94_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04295;old_locus_tag=D5F94_04295 NZ_QYTD01000003.1 Protein Homology CDS 485665 486363 . - 0 ID=cds-WP_124749398.1;Parent=gene-D5F94_RS04295;Dbxref=GenBank:WP_124749398.1;Name=WP_124749398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197400.1;locus_tag=D5F94_RS04295;product=tyrosine-protein kinase;protein_id=WP_124749398.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 486374 487066 . - . ID=gene-D5F94_RS04300;Name=D5F94_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04300;old_locus_tag=D5F94_04300 NZ_QYTD01000003.1 Protein Homology CDS 486374 487066 . - 0 ID=cds-WP_017647704.1;Parent=gene-D5F94_RS04300;Dbxref=GenBank:WP_017647704.1;Name=WP_017647704.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285282.1;locus_tag=D5F94_RS04300;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_017647704.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 487075 487806 . - . ID=gene-D5F94_RS04305;Name=cps4B;gbkey=Gene;gene=cps4B;gene_biotype=protein_coding;locus_tag=D5F94_RS04305;old_locus_tag=D5F94_04305 NZ_QYTD01000003.1 Protein Homology CDS 487075 487806 . - 0 ID=cds-WP_000565383.1;Parent=gene-D5F94_RS04305;Dbxref=GenBank:WP_000565383.1;Name=WP_000565383.1;gbkey=CDS;gene=cps4B;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647336.1;locus_tag=D5F94_RS04305;product=capsular polysaccharide biosynthesis protein Cps4B;protein_id=WP_000565383.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 487812 489269 . - . ID=gene-D5F94_RS04310;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=D5F94_RS04310;old_locus_tag=D5F94_04310 NZ_QYTD01000003.1 Protein Homology CDS 487812 489269 . - 0 ID=cds-WP_124749400.1;Parent=gene-D5F94_RS04310;Dbxref=GenBank:WP_124749400.1;Name=WP_124749400.1;gbkey=CDS;gene=cpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065004.1;locus_tag=D5F94_RS04310;product=LCP family glycopolymer transferase CpsA;protein_id=WP_124749400.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 489459 490382 . + . ID=gene-D5F94_RS04315;Name=D5F94_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04315;old_locus_tag=D5F94_04315 NZ_QYTD01000003.1 Protein Homology CDS 489459 490382 . + 0 ID=cds-WP_124749402.1;Parent=gene-D5F94_RS04315;Dbxref=GenBank:WP_124749402.1;Name=WP_124749402.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502945.1;locus_tag=D5F94_RS04315;product=LysR family transcriptional regulator;protein_id=WP_124749402.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 490407 491174 . - . ID=gene-D5F94_RS04320;Name=D5F94_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04320;old_locus_tag=D5F94_04320 NZ_QYTD01000003.1 Protein Homology CDS 490407 491174 . - 0 ID=cds-WP_000129272.1;Parent=gene-D5F94_RS04320;Dbxref=GenBank:WP_000129272.1;Name=WP_000129272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129264.1;locus_tag=D5F94_RS04320;product=hypothetical protein;protein_id=WP_000129272.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 491183 491893 . - . ID=gene-D5F94_RS04325;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=D5F94_RS04325;old_locus_tag=D5F94_04325 NZ_QYTD01000003.1 Protein Homology CDS 491183 491893 . - 0 ID=cds-WP_000022113.1;Parent=gene-D5F94_RS04325;Dbxref=GenBank:WP_000022113.1;Name=WP_000022113.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022115.1;locus_tag=D5F94_RS04325;product=purine-nucleoside phosphorylase;protein_id=WP_000022113.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 491877 493133 . - . ID=gene-D5F94_RS04330;Name=D5F94_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04330;old_locus_tag=D5F94_04330 NZ_QYTD01000003.1 Protein Homology CDS 491877 493133 . - 0 ID=cds-WP_086163384.1;Parent=gene-D5F94_RS04330;Dbxref=GenBank:WP_086163384.1;Name=WP_086163384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254664.1;locus_tag=D5F94_RS04330;product=chloride channel protein;protein_id=WP_086163384.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 493135 493944 . - . ID=gene-D5F94_RS04335;Name=D5F94_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04335;old_locus_tag=D5F94_04335 NZ_QYTD01000003.1 Protein Homology CDS 493135 493944 . - 0 ID=cds-WP_000173383.1;Parent=gene-D5F94_RS04335;Dbxref=GenBank:WP_000173383.1;Name=WP_000173383.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647702.1;locus_tag=D5F94_RS04335;product=purine-nucleoside phosphorylase;protein_id=WP_000173383.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 493983 494390 . - . ID=gene-D5F94_RS04340;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=D5F94_RS04340;old_locus_tag=D5F94_04340 NZ_QYTD01000003.1 Protein Homology CDS 493983 494390 . - 0 ID=cds-WP_016502947.1;Parent=gene-D5F94_RS04340;Dbxref=GenBank:WP_016502947.1;Name=WP_016502947.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416958.1;locus_tag=D5F94_RS04340;product=arsenate reductase (glutaredoxin);protein_id=WP_016502947.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 494441 495652 . - . ID=gene-D5F94_RS04345;Name=D5F94_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04345;old_locus_tag=D5F94_04345 NZ_QYTD01000003.1 Protein Homology CDS 494441 495652 . - 0 ID=cds-WP_124749404.1;Parent=gene-D5F94_RS04345;Dbxref=GenBank:WP_124749404.1;Name=WP_124749404.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739798.1;locus_tag=D5F94_RS04345;product=phosphopentomutase;protein_id=WP_124749404.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 495709 496380 . - . ID=gene-D5F94_RS04350;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=D5F94_RS04350;old_locus_tag=D5F94_04350 NZ_QYTD01000003.1 Protein Homology CDS 495709 496380 . - 0 ID=cds-WP_000343877.1;Parent=gene-D5F94_RS04350;Dbxref=GenBank:WP_000343877.1;Name=WP_000343877.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343878.1;locus_tag=D5F94_RS04350;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000343877.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 496618 497328 . - . ID=gene-D5F94_RS04355;Name=D5F94_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04355;old_locus_tag=D5F94_04355 NZ_QYTD01000003.1 Protein Homology CDS 496618 497328 . - 0 ID=cds-WP_001259484.1;Parent=gene-D5F94_RS04355;Dbxref=GenBank:WP_001259484.1;Name=WP_001259484.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270,GO:0031012;gbkey=CDS;go_component=extracellular matrix|0031012||IEA;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259490.1;locus_tag=D5F94_RS04355;product=matrixin family metalloprotease;protein_id=WP_001259484.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 497418 498206 . - . ID=gene-D5F94_RS04360;Name=D5F94_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04360;old_locus_tag=D5F94_04360 NZ_QYTD01000003.1 Protein Homology CDS 497418 498206 . - 0 ID=cds-WP_000863790.1;Parent=gene-D5F94_RS04360;Dbxref=GenBank:WP_000863790.1;Name=WP_000863790.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863793.1;locus_tag=D5F94_RS04360;product=alpha/beta hydrolase;protein_id=WP_000863790.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 498263 499924 . - . ID=gene-D5F94_RS04365;Name=D5F94_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04365;old_locus_tag=D5F94_04365 NZ_QYTD01000003.1 Protein Homology CDS 498263 499924 . - 0 ID=cds-WP_001280077.1;Parent=gene-D5F94_RS04365;Dbxref=GenBank:WP_001280077.1;Name=WP_001280077.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646201.1;locus_tag=D5F94_RS04365;product=ribonuclease J;protein_id=WP_001280077.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 500221 500982 . - . ID=gene-D5F94_RS04370;Name=D5F94_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04370;old_locus_tag=D5F94_04370 NZ_QYTD01000003.1 Protein Homology CDS 500221 500982 . - 0 ID=cds-WP_000245083.1;Parent=gene-D5F94_RS04370;Dbxref=GenBank:WP_000245083.1;Name=WP_000245083.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480857.1;locus_tag=D5F94_RS04370;product=ABC transporter ATP-binding protein;protein_id=WP_000245083.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 500982 501845 . - . ID=gene-D5F94_RS04375;Name=D5F94_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04375;old_locus_tag=D5F94_04375 NZ_QYTD01000003.1 Protein Homology CDS 500982 501845 . - 0 ID=cds-WP_000587303.1;Parent=gene-D5F94_RS04375;Dbxref=GenBank:WP_000587303.1;Name=WP_000587303.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587306.1;locus_tag=D5F94_RS04375;product=ABC transporter permease;protein_id=WP_000587303.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 501858 502862 . - . ID=gene-D5F94_RS04380;Name=trpX;gbkey=Gene;gene=trpX;gene_biotype=protein_coding;locus_tag=D5F94_RS04380;old_locus_tag=D5F94_04380 NZ_QYTD01000003.1 Protein Homology CDS 501858 502862 . - 0 ID=cds-WP_000790857.1;Parent=gene-D5F94_RS04380;Dbxref=GenBank:WP_000790857.1;Name=WP_000790857.1;gbkey=CDS;gene=trpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790854.1;locus_tag=D5F94_RS04380;product=tryptophan ABC transporter substrate-binding protein;protein_id=WP_000790857.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 503221 504876 . + . ID=gene-D5F94_RS04385;Name=D5F94_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04385;old_locus_tag=D5F94_04385 NZ_QYTD01000003.1 Protein Homology CDS 503221 504876 . + 0 ID=cds-WP_016502950.1;Parent=gene-D5F94_RS04385;Dbxref=GenBank:WP_016502950.1;Name=WP_016502950.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006719.1;locus_tag=D5F94_RS04385;product=Rqc2 family fibronectin-binding protein;protein_id=WP_016502950.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 504930 505649 . - . ID=gene-D5F94_RS04390;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=D5F94_RS04390;old_locus_tag=D5F94_04390 NZ_QYTD01000003.1 Protein Homology CDS 504930 505649 . - 0 ID=cds-WP_000005475.1;Parent=gene-D5F94_RS04390;Dbxref=GenBank:WP_000005475.1;Name=WP_000005475.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647746.1;locus_tag=D5F94_RS04390;product=acetolactate decarboxylase;protein_id=WP_000005475.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 505663 507345 . - . ID=gene-D5F94_RS04395;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=D5F94_RS04395;old_locus_tag=D5F94_04395 NZ_QYTD01000003.1 Protein Homology CDS 505663 507345 . - 0 ID=cds-WP_000140344.1;Parent=gene-D5F94_RS04395;Dbxref=GenBank:WP_000140344.1;Name=WP_000140344.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632065.1;locus_tag=D5F94_RS04395;product=acetolactate synthase AlsS;protein_id=WP_000140344.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 507455 508681 . - . ID=gene-D5F94_RS04400;Name=D5F94_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04400;old_locus_tag=D5F94_04400 NZ_QYTD01000003.1 Protein Homology CDS 507455 508681 . - 0 ID=cds-WP_016502951.1;Parent=gene-D5F94_RS04400;Dbxref=GenBank:WP_016502951.1;Name=WP_016502951.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058602.1;locus_tag=D5F94_RS04400;product=tetratricopeptide repeat protein;protein_id=WP_016502951.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 508671 509861 . - . ID=gene-D5F94_RS04405;Name=D5F94_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04405;old_locus_tag=D5F94_04405 NZ_QYTD01000003.1 Protein Homology CDS 508671 509861 . - 0 ID=cds-WP_001081535.1;Parent=gene-D5F94_RS04405;Dbxref=GenBank:WP_001081535.1;Name=WP_001081535.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081542.1;locus_tag=D5F94_RS04405;product=AI-2E family transporter;protein_id=WP_001081535.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 509953 510414 . - . ID=gene-D5F94_RS04410;Name=D5F94_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04410;old_locus_tag=D5F94_04410 NZ_QYTD01000003.1 Protein Homology CDS 509953 510414 . - 0 ID=cds-WP_124749406.1;Parent=gene-D5F94_RS04410;Dbxref=GenBank:WP_124749406.1;Name=WP_124749406.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502952.1;locus_tag=D5F94_RS04410;product=NUDIX hydrolase;protein_id=WP_124749406.1;transl_table=11 NZ_QYTD01000003.1 RefSeq gene 510404 510886 . - . ID=gene-D5F94_RS04415;Name=D5F94_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04415;old_locus_tag=D5F94_04415 NZ_QYTD01000003.1 Protein Homology CDS 510404 510886 . - 0 ID=cds-WP_000163512.1;Parent=gene-D5F94_RS04415;Dbxref=GenBank:WP_000163512.1;Name=WP_000163512.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285310.1;locus_tag=D5F94_RS04415;product=NUDIX hydrolase;protein_id=WP_000163512.1;transl_table=11 NZ_QYTD01000003.1 RefSeq pseudogene 511105 512712 . + . ID=gene-D5F94_RS04420;Name=hylB;end_range=512712,.;gbkey=Gene;gene=hylB;gene_biotype=pseudogene;locus_tag=D5F94_RS04420;old_locus_tag=D5F94_04420;partial=true;pseudo=true NZ_QYTD01000003.1 Protein Homology CDS 511105 512712 . + 0 ID=cds-D5F94_RS04420;Parent=gene-D5F94_RS04420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=512712,.;gbkey=CDS;gene=hylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403395.1;locus_tag=D5F94_RS04420;partial=true;product=hyaluronate lyase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000030.1 1 990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000030.1 RefSeq region 1 990 . + . ID=NZ_QYTD01000030.1:1..990;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000030.1 RefSeq gene 1 116 . + . ID=gene-D5F94_RS10435;Name=D5F94_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10435;old_locus_tag=D5F94_10440;partial=true;start_range=.,1 NZ_QYTD01000030.1 Protein Homology CDS 1 116 . + 2 ID=cds-WP_142997336.1;Parent=gene-D5F94_RS10435;Dbxref=GenBank:WP_142997336.1;Name=WP_142997336.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS10435;partial=true;product=IS3 family transposase;protein_id=WP_142997336.1;start_range=.,1;transl_table=11 NZ_QYTD01000030.1 RefSeq pseudogene 157 438 . + . ID=gene-D5F94_RS10440;Name=D5F94_RS10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10440;old_locus_tag=D5F94_10445;partial=true;pseudo=true;start_range=.,157 NZ_QYTD01000030.1 Protein Homology CDS 157 438 . + 0 ID=cds-D5F94_RS10440;Parent=gene-D5F94_RS10440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643060.1;locus_tag=D5F94_RS10440;partial=true;product=glycosyl transferase family 2;pseudo=true;start_range=.,157;transl_table=11 NZ_QYTD01000030.1 RefSeq pseudogene 685 831 . + . ID=gene-D5F94_RS10445;Name=D5F94_RS10445;end_range=831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10445;old_locus_tag=D5F94_10450;partial=true;pseudo=true NZ_QYTD01000030.1 Protein Homology CDS 685 831 . + 0 ID=cds-D5F94_RS10445;Parent=gene-D5F94_RS10445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000752178.1;locus_tag=D5F94_RS10445;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000030.1 RefSeq pseudogene 865 990 . - . ID=gene-D5F94_RS10450;Name=D5F94_RS10450;end_range=990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10450;old_locus_tag=D5F94_10455;partial=true;pseudo=true NZ_QYTD01000030.1 Protein Homology CDS 865 990 . - 0 ID=cds-D5F94_RS10450;Parent=gene-D5F94_RS10450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10450;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000031.1 1 1200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000031.1 RefSeq region 1 1200 . + . ID=NZ_QYTD01000031.1:1..1200;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000031.1 RefSeq gene 1 200 . + . ID=gene-D5F94_RS10455;Name=D5F94_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10455;old_locus_tag=D5F94_10460;partial=true;start_range=.,1 NZ_QYTD01000031.1 Protein Homology CDS 1 200 . + 2 ID=cds-WP_142358556.1;Parent=gene-D5F94_RS10455;Dbxref=GenBank:WP_142358556.1;Name=WP_142358556.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10455;partial=true;product=IS3 family transposase;protein_id=WP_142358556.1;start_range=.,1;transl_table=11 NZ_QYTD01000031.1 RefSeq gene 407 895 . - . ID=gene-D5F94_RS10460;Name=D5F94_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10460;old_locus_tag=D5F94_10465 NZ_QYTD01000031.1 Protein Homology CDS 407 895 . - 0 ID=cds-WP_000997604.1;Parent=gene-D5F94_RS10460;Dbxref=GenBank:WP_000997604.1;Name=WP_000997604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388668.1;locus_tag=D5F94_RS10460;product=prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_000997604.1;transl_table=11 NZ_QYTD01000031.1 RefSeq gene 1089 1200 . + . ID=gene-D5F94_RS10465;Name=D5F94_RS10465;end_range=1200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10465;old_locus_tag=D5F94_10470;partial=true NZ_QYTD01000031.1 Protein Homology CDS 1089 1200 . + 0 ID=cds-WP_142997337.1;Parent=gene-D5F94_RS10465;Dbxref=GenBank:WP_142997337.1;Name=WP_142997337.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1200,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10465;partial=true;product=transposase;protein_id=WP_142997337.1;transl_table=11 ##sequence-region NZ_QYTD01000032.1 1 1139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000032.1 RefSeq region 1 1139 . + . ID=NZ_QYTD01000032.1:1..1139;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000032.1 RefSeq pseudogene 1 227 . + . ID=gene-D5F94_RS10470;Name=D5F94_RS10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10470;old_locus_tag=D5F94_10475;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000032.1 Protein Homology CDS 1 227 . + 2 ID=cds-D5F94_RS10470;Parent=gene-D5F94_RS10470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226747.1;locus_tag=D5F94_RS10470;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000032.1 RefSeq gene 423 941 . + . ID=gene-D5F94_RS10475;Name=D5F94_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10475;old_locus_tag=D5F94_10480 NZ_QYTD01000032.1 Protein Homology CDS 423 941 . + 0 ID=cds-WP_016480264.1;Parent=gene-D5F94_RS10475;Dbxref=GenBank:WP_016480264.1;Name=WP_016480264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.6;locus_tag=D5F94_RS10475;product=AbiH family protein;protein_id=WP_016480264.1;transl_table=11 NZ_QYTD01000032.1 RefSeq pseudogene 959 1139 . - . ID=gene-D5F94_RS10480;Name=D5F94_RS10480;end_range=1139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10480;old_locus_tag=D5F94_10485;partial=true;pseudo=true NZ_QYTD01000032.1 Protein Homology CDS 959 1139 . - 1 ID=cds-D5F94_RS10480;Parent=gene-D5F94_RS10480;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10480;partial=true;product=IS3-like element ISSag5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000033.1 1 1098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000033.1 RefSeq region 1 1098 . + . ID=NZ_QYTD01000033.1:1..1098;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000033.1 RefSeq gene 1 215 . + . ID=gene-D5F94_RS10485;Name=D5F94_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10485;old_locus_tag=D5F94_10490;partial=true;start_range=.,1 NZ_QYTD01000033.1 Protein Homology CDS 1 215 . + 2 ID=cds-WP_142997339.1;Parent=gene-D5F94_RS10485;Dbxref=GenBank:WP_142997339.1;Name=WP_142997339.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10485;partial=true;product=IS3 family transposase;protein_id=WP_142997339.1;start_range=.,1;transl_table=11 NZ_QYTD01000033.1 RefSeq gene 229 378 . - . ID=gene-D5F94_RS10575;Name=D5F94_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10575 NZ_QYTD01000033.1 GeneMarkS-2+ CDS 229 378 . - 0 ID=cds-WP_180383444.1;Parent=gene-D5F94_RS10575;Dbxref=GenBank:WP_180383444.1;Name=WP_180383444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F94_RS10575;product=hypothetical protein;protein_id=WP_180383444.1;transl_table=11 NZ_QYTD01000033.1 RefSeq gene 359 577 . - . ID=gene-D5F94_RS10490;Name=D5F94_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10490;old_locus_tag=D5F94_10495 NZ_QYTD01000033.1 Protein Homology CDS 359 577 . - 0 ID=cds-WP_086163575.1;Parent=gene-D5F94_RS10490;Dbxref=GenBank:WP_086163575.1;Name=WP_086163575.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021071.6;locus_tag=D5F94_RS10490;product=conserved phage C-terminal domain-containing protein;protein_id=WP_086163575.1;transl_table=11 NZ_QYTD01000033.1 RefSeq gene 753 1098 . - . ID=gene-D5F94_RS10500;Name=D5F94_RS10500;end_range=1098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10500;old_locus_tag=D5F94_10505;partial=true NZ_QYTD01000033.1 Protein Homology CDS 753 1098 . - 1 ID=cds-WP_180383582.1;Parent=gene-D5F94_RS10500;Dbxref=GenBank:WP_180383582.1;Name=WP_180383582.1;end_range=1098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012766921.1;locus_tag=D5F94_RS10500;partial=true;product=transposase;protein_id=WP_180383582.1;transl_table=11 ##sequence-region NZ_QYTD01000034.1 1 2092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000034.1 RefSeq region 1 2092 . + . ID=NZ_QYTD01000034.1:1..2092;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000034.1 RefSeq pseudogene 1 184 . - . ID=gene-D5F94_RS10505;Name=D5F94_RS10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10505;old_locus_tag=D5F94_10510;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000034.1 Protein Homology CDS 1 184 . - 0 ID=cds-D5F94_RS10505;Parent=gene-D5F94_RS10505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468698.1;locus_tag=D5F94_RS10505;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000034.1 RefSeq gene 334 1707 . - . ID=gene-D5F94_RS10510;Name=D5F94_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10510;old_locus_tag=D5F94_10515 NZ_QYTD01000034.1 Protein Homology CDS 334 1707 . - 0 ID=cds-WP_124749649.1;Parent=gene-D5F94_RS10510;Dbxref=GenBank:WP_124749649.1;Name=WP_124749649.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015898628.1;locus_tag=D5F94_RS10510;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_124749649.1;transl_table=11 NZ_QYTD01000034.1 RefSeq gene 1938 2092 . + . ID=gene-D5F94_RS10515;Name=D5F94_RS10515;end_range=2092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10515;old_locus_tag=D5F94_10520;partial=true NZ_QYTD01000034.1 Protein Homology CDS 1938 2092 . + 0 ID=cds-WP_142358559.1;Parent=gene-D5F94_RS10515;Dbxref=GenBank:WP_142358559.1;Name=WP_142358559.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2092,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS10515;partial=true;product=transposase;protein_id=WP_142358559.1;transl_table=11 ##sequence-region NZ_QYTD01000035.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000035.1 RefSeq region 1 512 . + . ID=NZ_QYTD01000035.1:1..512;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000035.1 RefSeq gene 1 512 . - . ID=gene-D5F94_RS10520;Name=D5F94_RS10520;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10520;old_locus_tag=D5F94_10525;partial=true;start_range=.,1 NZ_QYTD01000035.1 Protein Homology CDS 1 512 . - 1 ID=cds-WP_446546122.1;Parent=gene-D5F94_RS10520;Dbxref=GenBank:WP_446546122.1;Name=WP_446546122.1;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480318.1;locus_tag=D5F94_RS10520;partial=true;product=amino acid kinase family protein;protein_id=WP_446546122.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QYTD01000004.1 1 19738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000004.1 RefSeq region 1 19738 . + . ID=NZ_QYTD01000004.1:1..19738;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000004.1 RefSeq gene 1 219 . + . ID=gene-D5F94_RS04425;Name=D5F94_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04425;old_locus_tag=D5F94_04425;partial=true;start_range=.,1 NZ_QYTD01000004.1 Protein Homology CDS 1 219 . + 0 ID=cds-WP_142997323.1;Parent=gene-D5F94_RS04425;Dbxref=GenBank:WP_142997323.1;Name=WP_142997323.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS04425;partial=true;product=integrase core domain-containing protein;protein_id=WP_142997323.1;start_range=.,1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 373 2955 . - . ID=gene-D5F94_RS04430;Name=D5F94_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04430;old_locus_tag=D5F94_04430 NZ_QYTD01000004.1 Protein Homology CDS 373 2955 . - 0 ID=cds-WP_086163495.1;Parent=gene-D5F94_RS04430;Dbxref=GenBank:WP_086163495.1;Name=WP_086163495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080375.1;locus_tag=D5F94_RS04430;product=pneumococcal-type histidine triad protein;protein_id=WP_086163495.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 2982 3905 . - . ID=gene-D5F94_RS04435;Name=D5F94_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04435;old_locus_tag=D5F94_04435 NZ_QYTD01000004.1 Protein Homology CDS 2982 3905 . - 0 ID=cds-WP_000822455.1;Parent=gene-D5F94_RS04435;Dbxref=GenBank:WP_000822455.1;Name=WP_000822455.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822457.1;locus_tag=D5F94_RS04435;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_000822455.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 4160 4603 . - . ID=gene-D5F94_RS04440;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=D5F94_RS04440;old_locus_tag=D5F94_04440 NZ_QYTD01000004.1 Protein Homology CDS 4160 4603 . - 0 ID=cds-WP_124749413.1;Parent=gene-D5F94_RS04440;Dbxref=GenBank:WP_124749413.1;Name=WP_124749413.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481271.1;locus_tag=D5F94_RS04440;product=D-aminoacyl-tRNA deacylase;protein_id=WP_124749413.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 4613 6829 . - . ID=gene-D5F94_RS04445;Name=D5F94_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04445;old_locus_tag=D5F94_04445 NZ_QYTD01000004.1 Protein Homology CDS 4613 6829 . - 0 ID=cds-WP_000237872.1;Parent=gene-D5F94_RS04445;Dbxref=GenBank:WP_000237872.1;Name=WP_000237872.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019316080.1;locus_tag=D5F94_RS04445;product=RelA/SpoT family protein;protein_id=WP_000237872.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 7089 9491 . + . ID=gene-D5F94_RS04450;Name=D5F94_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04450;old_locus_tag=D5F94_04450 NZ_QYTD01000004.1 Protein Homology CDS 7089 9491 . + 0 ID=cds-WP_086163496.1;Parent=gene-D5F94_RS04450;Dbxref=GenBank:WP_086163496.1;Name=WP_086163496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033916.1;locus_tag=D5F94_RS04450;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_086163496.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 9648 10103 . + . ID=gene-D5F94_RS04455;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D5F94_RS04455;old_locus_tag=D5F94_04455 NZ_QYTD01000004.1 Protein Homology CDS 9648 10103 . + 0 ID=cds-WP_001125401.1;Parent=gene-D5F94_RS04455;Dbxref=GenBank:WP_001125401.1;Name=WP_001125401.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125399.1;locus_tag=D5F94_RS04455;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001125401.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 10114 11151 . + . ID=gene-D5F94_RS04460;Name=D5F94_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04460;old_locus_tag=D5F94_04460 NZ_QYTD01000004.1 Protein Homology CDS 10114 11151 . + 0 ID=cds-WP_016481273.1;Parent=gene-D5F94_RS04460;Dbxref=GenBank:WP_016481273.1;Name=WP_016481273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450421.1;locus_tag=D5F94_RS04460;product=M42 family metallopeptidase;protein_id=WP_016481273.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 11151 11648 . + . ID=gene-D5F94_RS04465;Name=D5F94_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04465;old_locus_tag=D5F94_04465 NZ_QYTD01000004.1 Protein Homology CDS 11151 11648 . + 0 ID=cds-WP_124749415.1;Parent=gene-D5F94_RS04465;Dbxref=GenBank:WP_124749415.1;Name=WP_124749415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000226640.1;locus_tag=D5F94_RS04465;product=kinase;protein_id=WP_124749415.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 11870 12907 . - . ID=gene-D5F94_RS04470;Name=D5F94_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04470;old_locus_tag=D5F94_04470 NZ_QYTD01000004.1 Protein Homology CDS 11870 12907 . - 0 ID=cds-WP_000660657.1;Parent=gene-D5F94_RS04470;Dbxref=GenBank:WP_000660657.1;Name=WP_000660657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660650.1;locus_tag=D5F94_RS04470;product=extracellular solute-binding protein;protein_id=WP_000660657.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 12919 13692 . - . ID=gene-D5F94_RS04475;Name=D5F94_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04475;old_locus_tag=D5F94_04475 NZ_QYTD01000004.1 Protein Homology CDS 12919 13692 . - 0 ID=cds-WP_000286068.1;Parent=gene-D5F94_RS04475;Dbxref=GenBank:WP_000286068.1;Name=WP_000286068.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286075.1;locus_tag=D5F94_RS04475;product=response regulator transcription factor;protein_id=WP_000286068.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 13696 15345 . - . ID=gene-D5F94_RS04480;Name=D5F94_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04480;old_locus_tag=D5F94_04480 NZ_QYTD01000004.1 Protein Homology CDS 13696 15345 . - 0 ID=cds-WP_016503275.1;Parent=gene-D5F94_RS04480;Dbxref=GenBank:WP_016503275.1;Name=WP_016503275.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632306.1;locus_tag=D5F94_RS04480;product=sensor histidine kinase;protein_id=WP_016503275.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 15483 16310 . - . ID=gene-D5F94_RS04485;Name=D5F94_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04485;old_locus_tag=D5F94_04485 NZ_QYTD01000004.1 Protein Homology CDS 15483 16310 . - 0 ID=cds-WP_000841957.1;Parent=gene-D5F94_RS04485;Dbxref=GenBank:WP_000841957.1;Name=WP_000841957.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000841956.1;locus_tag=D5F94_RS04485;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000841957.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 16307 17116 . - . ID=gene-D5F94_RS04490;Name=D5F94_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04490;old_locus_tag=D5F94_04490 NZ_QYTD01000004.1 Protein Homology CDS 16307 17116 . - 0 ID=cds-WP_000605775.1;Parent=gene-D5F94_RS04490;Dbxref=GenBank:WP_000605775.1;Name=WP_000605775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644846.1;locus_tag=D5F94_RS04490;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000605775.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 17132 17623 . - . ID=gene-D5F94_RS04495;Name=D5F94_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04495;old_locus_tag=D5F94_04495 NZ_QYTD01000004.1 Protein Homology CDS 17132 17623 . - 0 ID=cds-WP_000632641.1;Parent=gene-D5F94_RS04495;Dbxref=GenBank:WP_000632641.1;Name=WP_000632641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048186.1;locus_tag=D5F94_RS04495;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_000632641.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 17641 18066 . - . ID=gene-D5F94_RS04500;Name=D5F94_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04500;old_locus_tag=D5F94_04500 NZ_QYTD01000004.1 Protein Homology CDS 17641 18066 . - 0 ID=cds-WP_000823122.1;Parent=gene-D5F94_RS04500;Dbxref=GenBank:WP_000823122.1;Name=WP_000823122.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823118.1;locus_tag=D5F94_RS04500;product=PTS sugar transporter subunit IIA domain-containing protein;protein_id=WP_000823122.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 18313 19347 . - . ID=gene-D5F94_RS04505;Name=D5F94_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04505;old_locus_tag=D5F94_04505 NZ_QYTD01000004.1 Protein Homology CDS 18313 19347 . - 0 ID=cds-WP_180383440.1;Parent=gene-D5F94_RS04505;Dbxref=GenBank:WP_180383440.1;Name=WP_180383440.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643312.1;locus_tag=D5F94_RS04505;product=acyltransferase family protein;protein_id=WP_180383440.1;transl_table=11 NZ_QYTD01000004.1 RefSeq gene 19556 19738 . + . ID=gene-D5F94_RS04510;Name=D5F94_RS04510;end_range=19738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04510;old_locus_tag=D5F94_04510;partial=true NZ_QYTD01000004.1 Protein Homology CDS 19556 19738 . + 0 ID=cds-WP_086163195.1;Parent=gene-D5F94_RS04510;Dbxref=GenBank:WP_086163195.1;Name=WP_086163195.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=19738,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS04510;partial=true;product=transposase;protein_id=WP_086163195.1;transl_table=11 ##sequence-region NZ_QYTD01000005.1 1 236540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000005.1 RefSeq region 1 236540 . + . ID=NZ_QYTD01000005.1:1..236540;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000005.1 RefSeq gene 1 569 . + . ID=gene-D5F94_RS04515;Name=D5F94_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04515;old_locus_tag=D5F94_04515;partial=true;start_range=.,1 NZ_QYTD01000005.1 Protein Homology CDS 1 569 . + 2 ID=cds-WP_124749417.1;Parent=gene-D5F94_RS04515;Dbxref=GenBank:WP_124749417.1;Name=WP_124749417.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=D5F94_RS04515;partial=true;product=IS982 family transposase;protein_id=WP_124749417.1;start_range=.,1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 574 1320 . + . ID=gene-D5F94_RS04520;Name=D5F94_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04520;old_locus_tag=D5F94_04520 NZ_QYTD01000005.1 Protein Homology CDS 574 1320 . + 0 ID=cds-WP_124749419.1;Parent=gene-D5F94_RS04520;Dbxref=GenBank:WP_124749419.1;Name=WP_124749419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806825.1;locus_tag=D5F94_RS04520;product=AP endonuclease;protein_id=WP_124749419.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 1399 3066 . + . ID=gene-D5F94_RS04525;Name=D5F94_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04525;old_locus_tag=D5F94_04525 NZ_QYTD01000005.1 Protein Homology CDS 1399 3066 . + 0 ID=cds-WP_124749421.1;Parent=gene-D5F94_RS04525;Dbxref=GenBank:WP_124749421.1;Name=WP_124749421.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100298.1;locus_tag=D5F94_RS04525;product=BglG family transcription antiterminator;protein_id=WP_124749421.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 3383 4474 . + . ID=gene-D5F94_RS04530;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=D5F94_RS04530;old_locus_tag=D5F94_04530 NZ_QYTD01000005.1 Protein Homology CDS 3383 4474 . + 0 ID=cds-WP_001134214.1;Parent=gene-D5F94_RS04530;Dbxref=GenBank:WP_001134214.1;Name=WP_001134214.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863918.1;locus_tag=D5F94_RS04530;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001134214.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 4564 6942 . + . ID=gene-D5F94_RS04535;Name=D5F94_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04535;old_locus_tag=D5F94_04535 NZ_QYTD01000005.1 Protein Homology CDS 4564 6942 . + 0 ID=cds-WP_086163487.1;Parent=gene-D5F94_RS04535;Dbxref=GenBank:WP_086163487.1;Name=WP_086163487.1;Ontology_term=GO:0005975,GO:0016832,GO:0030976;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288401.1;locus_tag=D5F94_RS04535;product=phosphoketolase family protein;protein_id=WP_086163487.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 7319 8542 . + . ID=gene-D5F94_RS04545;Name=D5F94_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04545;old_locus_tag=D5F94_04545 NZ_QYTD01000005.1 Protein Homology CDS 7319 8542 . + 0 ID=cds-WP_000181804.1;Parent=gene-D5F94_RS04545;Dbxref=GenBank:WP_000181804.1;Name=WP_000181804.1;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647591.1;locus_tag=D5F94_RS04545;product=quaternary amine ABC transporter ATP-binding protein;protein_id=WP_000181804.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 8561 10288 . + . ID=gene-D5F94_RS04550;Name=D5F94_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04550;old_locus_tag=D5F94_04550 NZ_QYTD01000005.1 Protein Homology CDS 8561 10288 . + 0 ID=cds-WP_016503219.1;Parent=gene-D5F94_RS04550;Dbxref=GenBank:WP_016503219.1;Name=WP_016503219.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429367.1;locus_tag=D5F94_RS04550;product=ABC transporter permease/substrate binding protein;protein_id=WP_016503219.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 10534 11889 . + . ID=gene-D5F94_RS04555;Name=D5F94_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04555;old_locus_tag=D5F94_04555 NZ_QYTD01000005.1 Protein Homology CDS 10534 11889 . + 0 ID=cds-WP_016503218.1;Parent=gene-D5F94_RS04555;Dbxref=GenBank:WP_016503218.1;Name=WP_016503218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647765.1;locus_tag=D5F94_RS04555;product=YjiH family protein;protein_id=WP_016503218.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 12073 12207 . + . ID=gene-D5F94_RS04560;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=D5F94_RS04560;old_locus_tag=D5F94_04560 NZ_QYTD01000005.1 Protein Homology CDS 12073 12207 . + 0 ID=cds-WP_000831903.1;Parent=gene-D5F94_RS04560;Dbxref=GenBank:WP_000831903.1;Name=WP_000831903.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=D5F94_RS04560;product=50S ribosomal protein L34;protein_id=WP_000831903.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 12563 13237 . + . ID=gene-D5F94_RS04565;Name=dltR;gbkey=Gene;gene=dltR;gene_biotype=protein_coding;locus_tag=D5F94_RS04565;old_locus_tag=D5F94_04565 NZ_QYTD01000005.1 Protein Homology CDS 12563 13237 . + 0 ID=cds-WP_016503217.1;Parent=gene-D5F94_RS04565;Dbxref=GenBank:WP_016503217.1;Name=WP_016503217.1;gbkey=CDS;gene=dltR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238594.1;locus_tag=D5F94_RS04565;product=two-component system response regulator DltR;protein_id=WP_016503217.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 13237 14424 . + . ID=gene-D5F94_RS04570;Name=dltS;gbkey=Gene;gene=dltS;gene_biotype=protein_coding;locus_tag=D5F94_RS04570;old_locus_tag=D5F94_04570 NZ_QYTD01000005.1 Protein Homology CDS 13237 14424 . + 0 ID=cds-WP_000490537.1;Parent=gene-D5F94_RS04570;Dbxref=GenBank:WP_000490537.1;Name=WP_000490537.1;gbkey=CDS;gene=dltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490537.1;locus_tag=D5F94_RS04570;product=two-component system sensor histidine kinase DltS;protein_id=WP_000490537.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 14435 14557 . + . ID=gene-D5F94_RS04575;Name=D5F94_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04575;old_locus_tag=D5F94_04575 NZ_QYTD01000005.1 Protein Homology CDS 14435 14557 . + 0 ID=cds-WP_000806141.1;Parent=gene-D5F94_RS04575;Dbxref=GenBank:WP_000806141.1;Name=WP_000806141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806141.1;locus_tag=D5F94_RS04575;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_000806141.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 14570 16105 . + . ID=gene-D5F94_RS04580;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=D5F94_RS04580;old_locus_tag=D5F94_04580 NZ_QYTD01000005.1 Protein Homology CDS 14570 16105 . + 0 ID=cds-WP_124749423.1;Parent=gene-D5F94_RS04580;Dbxref=GenBank:WP_124749423.1;Name=WP_124749423.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581011.1;locus_tag=D5F94_RS04580;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_124749423.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 16102 17367 . + . ID=gene-D5F94_RS04585;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=D5F94_RS04585;old_locus_tag=D5F94_04585 NZ_QYTD01000005.1 Protein Homology CDS 16102 17367 . + 0 ID=cds-WP_086163486.1;Parent=gene-D5F94_RS04585;Dbxref=GenBank:WP_086163486.1;Name=WP_086163486.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650936.1;locus_tag=D5F94_RS04585;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_086163486.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 17382 17621 . + . ID=gene-D5F94_RS04590;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=D5F94_RS04590;old_locus_tag=D5F94_04590 NZ_QYTD01000005.1 Protein Homology CDS 17382 17621 . + 0 ID=cds-WP_000351975.1;Parent=gene-D5F94_RS04590;Dbxref=GenBank:WP_000351975.1;Name=WP_000351975.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591431.1;locus_tag=D5F94_RS04590;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_000351975.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 17614 18876 . + . ID=gene-D5F94_RS04595;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=D5F94_RS04595;old_locus_tag=D5F94_04595 NZ_QYTD01000005.1 Protein Homology CDS 17614 18876 . + 0 ID=cds-WP_016503215.1;Parent=gene-D5F94_RS04595;Dbxref=GenBank:WP_016503215.1;Name=WP_016503215.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503215.1;locus_tag=D5F94_RS04595;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_016503215.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 19051 19443 . + . ID=gene-D5F94_RS04600;Name=D5F94_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04600;old_locus_tag=D5F94_04600 NZ_QYTD01000005.1 Protein Homology CDS 19051 19443 . + 0 ID=cds-WP_000835881.1;Parent=gene-D5F94_RS04600;Dbxref=GenBank:WP_000835881.1;Name=WP_000835881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835879.1;locus_tag=D5F94_RS04600;product=DUF1310 domain-containing protein;protein_id=WP_000835881.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 19443 20735 . + . ID=gene-D5F94_RS04605;Name=D5F94_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04605;old_locus_tag=D5F94_04605 NZ_QYTD01000005.1 Protein Homology CDS 19443 20735 . + 0 ID=cds-WP_016503212.1;Parent=gene-D5F94_RS04605;Dbxref=GenBank:WP_016503212.1;Name=WP_016503212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647499.1;locus_tag=D5F94_RS04605;product=Mbeg1-like protein;protein_id=WP_016503212.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 20726 21118 . + . ID=gene-D5F94_RS04610;Name=D5F94_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04610;old_locus_tag=D5F94_04610 NZ_QYTD01000005.1 Protein Homology CDS 20726 21118 . + 0 ID=cds-WP_124749425.1;Parent=gene-D5F94_RS04610;Dbxref=GenBank:WP_124749425.1;Name=WP_124749425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644028.1;locus_tag=D5F94_RS04610;product=hypothetical protein;protein_id=WP_124749425.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 21128 21409 . + . ID=gene-D5F94_RS04615;Name=D5F94_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04615;old_locus_tag=D5F94_04615 NZ_QYTD01000005.1 Protein Homology CDS 21128 21409 . + 0 ID=cds-WP_000055643.1;Parent=gene-D5F94_RS04615;Dbxref=GenBank:WP_000055643.1;Name=WP_000055643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055648.1;locus_tag=D5F94_RS04615;product=hypothetical protein;protein_id=WP_000055643.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 21591 22373 . + . ID=gene-D5F94_RS04620;Name=D5F94_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04620;old_locus_tag=D5F94_04620 NZ_QYTD01000005.1 Protein Homology CDS 21591 22373 . + 0 ID=cds-WP_016503206.1;Parent=gene-D5F94_RS04620;Dbxref=GenBank:WP_016503206.1;Name=WP_016503206.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590333.1;locus_tag=D5F94_RS04620;product=TatD family hydrolase;protein_id=WP_016503206.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 22360 22926 . + . ID=gene-D5F94_RS04625;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=D5F94_RS04625;old_locus_tag=D5F94_04625 NZ_QYTD01000005.1 Protein Homology CDS 22360 22926 . + 0 ID=cds-WP_124749427.1;Parent=gene-D5F94_RS04625;Dbxref=GenBank:WP_124749427.1;Name=WP_124749427.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717750.1;locus_tag=D5F94_RS04625;product=ribonuclease M5;protein_id=WP_124749427.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 22930 23379 . + . ID=gene-D5F94_RS04630;Name=D5F94_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04630;old_locus_tag=D5F94_04630 NZ_QYTD01000005.1 Protein Homology CDS 22930 23379 . + 0 ID=cds-WP_016503204.1;Parent=gene-D5F94_RS04630;Dbxref=GenBank:WP_016503204.1;Name=WP_016503204.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280758.1;locus_tag=D5F94_RS04630;product=HIT family protein;protein_id=WP_016503204.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 23407 24279 . + . ID=gene-D5F94_RS04635;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=D5F94_RS04635;old_locus_tag=D5F94_04635 NZ_QYTD01000005.1 Protein Homology CDS 23407 24279 . + 0 ID=cds-WP_016503203.1;Parent=gene-D5F94_RS04635;Dbxref=GenBank:WP_016503203.1;Name=WP_016503203.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030634.1;locus_tag=D5F94_RS04635;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_016503203.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 24283 25134 . + . ID=gene-D5F94_RS04640;Name=D5F94_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04640;old_locus_tag=D5F94_04640 NZ_QYTD01000005.1 Protein Homology CDS 24283 25134 . + 0 ID=cds-WP_000959497.1;Parent=gene-D5F94_RS04640;Dbxref=GenBank:WP_000959497.1;Name=WP_000959497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959505.1;locus_tag=D5F94_RS04640;product=putative RNA methyltransferase;protein_id=WP_000959497.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 25290 26162 . + . ID=gene-D5F94_RS04645;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=D5F94_RS04645;old_locus_tag=D5F94_04645 NZ_QYTD01000005.1 Protein Homology CDS 25290 26162 . + 0 ID=cds-WP_016503202.1;Parent=gene-D5F94_RS04645;Dbxref=GenBank:WP_016503202.1;Name=WP_016503202.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768211.1;locus_tag=D5F94_RS04645;product=ribosome small subunit-dependent GTPase A;protein_id=WP_016503202.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 26169 26831 . + . ID=gene-D5F94_RS04650;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=D5F94_RS04650;old_locus_tag=D5F94_04650 NZ_QYTD01000005.1 Protein Homology CDS 26169 26831 . + 0 ID=cds-WP_000106178.1;Parent=gene-D5F94_RS04650;Dbxref=GenBank:WP_000106178.1;Name=WP_000106178.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106179.1;locus_tag=D5F94_RS04650;product=ribulose-phosphate 3-epimerase;protein_id=WP_000106178.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 26824 27456 . + . ID=gene-D5F94_RS04655;Name=D5F94_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04655;old_locus_tag=D5F94_04655 NZ_QYTD01000005.1 Protein Homology CDS 26824 27456 . + 0 ID=cds-WP_000160925.1;Parent=gene-D5F94_RS04655;Dbxref=GenBank:WP_000160925.1;Name=WP_000160925.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645634.1;locus_tag=D5F94_RS04655;product=thiamine diphosphokinase;protein_id=WP_000160925.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 27458 28732 . + . ID=gene-D5F94_RS04660;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=D5F94_RS04660;old_locus_tag=D5F94_04660 NZ_QYTD01000005.1 Protein Homology CDS 27458 28732 . + 0 ID=cds-WP_124749429.1;Parent=gene-D5F94_RS04660;Dbxref=GenBank:WP_124749429.1;Name=WP_124749429.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000960179.1;locus_tag=D5F94_RS04660;product=DNA recombination protein RmuC;protein_id=WP_124749429.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 28722 29663 . + . ID=gene-D5F94_RS04665;Name=D5F94_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04665;old_locus_tag=D5F94_04665 NZ_QYTD01000005.1 Protein Homology CDS 28722 29663 . + 0 ID=cds-WP_000700694.1;Parent=gene-D5F94_RS04665;Dbxref=GenBank:WP_000700694.1;Name=WP_000700694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771182.1;locus_tag=D5F94_RS04665;product=3'-5' exoribonuclease YhaM family protein;protein_id=WP_000700694.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 29760 30572 . + . ID=gene-D5F94_RS04670;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=D5F94_RS04670;old_locus_tag=D5F94_04670 NZ_QYTD01000005.1 Protein Homology CDS 29760 30572 . + 0 ID=cds-WP_000776878.1;Parent=gene-D5F94_RS04670;Dbxref=GenBank:WP_000776878.1;Name=WP_000776878.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376136.1;locus_tag=D5F94_RS04670;product=pur operon repressor;protein_id=WP_000776878.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 30791 31204 . + . ID=gene-D5F94_RS04680;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=D5F94_RS04680;old_locus_tag=D5F94_04680 NZ_QYTD01000005.1 Protein Homology CDS 30791 31204 . + 0 ID=cds-WP_001142328.1;Parent=gene-D5F94_RS04680;Dbxref=GenBank:WP_001142328.1;Name=WP_001142328.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142328.1;locus_tag=D5F94_RS04680;product=30S ribosomal protein S12;protein_id=WP_001142328.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 31226 31696 . + . ID=gene-D5F94_RS04685;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=D5F94_RS04685;old_locus_tag=D5F94_04685 NZ_QYTD01000005.1 Protein Homology CDS 31226 31696 . + 0 ID=cds-WP_000087842.1;Parent=gene-D5F94_RS04685;Dbxref=GenBank:WP_000087842.1;Name=WP_000087842.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=D5F94_RS04685;product=30S ribosomal protein S7;protein_id=WP_000087842.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 31851 33929 . + . ID=gene-D5F94_RS04690;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=D5F94_RS04690;old_locus_tag=D5F94_04690 NZ_QYTD01000005.1 Protein Homology CDS 31851 33929 . + 0 ID=cds-WP_000090323.1;Parent=gene-D5F94_RS04690;Dbxref=GenBank:WP_000090323.1;Name=WP_000090323.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090325.1;locus_tag=D5F94_RS04690;product=elongation factor G;protein_id=WP_000090323.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 34133 35143 . + . ID=gene-D5F94_RS04695;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=D5F94_RS04695;old_locus_tag=D5F94_04695 NZ_QYTD01000005.1 Protein Homology CDS 34133 35143 . + 0 ID=cds-WP_000260656.1;Parent=gene-D5F94_RS04695;Dbxref=GenBank:WP_000260656.1;Name=WP_000260656.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=D5F94_RS04695;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000260656.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 35352 36221 . + . ID=gene-D5F94_RS04700;Name=D5F94_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04700;old_locus_tag=D5F94_04700 NZ_QYTD01000005.1 Protein Homology CDS 35352 36221 . + 0 ID=cds-WP_000858924.1;Parent=gene-D5F94_RS04700;Dbxref=GenBank:WP_000858924.1;Name=WP_000858924.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858925.1;locus_tag=D5F94_RS04700;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_000858924.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 36356 37552 . + . ID=gene-D5F94_RS04705;Name=D5F94_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04705;old_locus_tag=D5F94_04705 NZ_QYTD01000005.1 Protein Homology CDS 36356 37552 . + 0 ID=cds-WP_001096753.1;Parent=gene-D5F94_RS04705;Dbxref=GenBank:WP_001096753.1;Name=WP_001096753.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=D5F94_RS04705;product=phosphoglycerate kinase;protein_id=WP_001096753.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 37815 38354 . + . ID=gene-D5F94_RS04710;Name=D5F94_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04710;old_locus_tag=D5F94_04710 NZ_QYTD01000005.1 Protein Homology CDS 37815 38354 . + 0 ID=cds-WP_016503200.1;Parent=gene-D5F94_RS04710;Dbxref=GenBank:WP_016503200.1;Name=WP_016503200.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854122.1;locus_tag=D5F94_RS04710;product=FUSC family protein;protein_id=WP_016503200.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 38434 38805 . + . ID=gene-D5F94_RS04715;Name=D5F94_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04715;old_locus_tag=D5F94_04715 NZ_QYTD01000005.1 Protein Homology CDS 38434 38805 . + 0 ID=cds-WP_000664338.1;Parent=gene-D5F94_RS04715;Dbxref=GenBank:WP_000664338.1;Name=WP_000664338.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768344.1;locus_tag=D5F94_RS04715;product=MerR family transcriptional regulator;protein_id=WP_000664338.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 38839 40185 . + . ID=gene-D5F94_RS04720;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D5F94_RS04720;old_locus_tag=D5F94_04720 NZ_QYTD01000005.1 Protein Homology CDS 38839 40185 . + 0 ID=cds-WP_016503199.1;Parent=gene-D5F94_RS04720;Dbxref=GenBank:WP_016503199.1;Name=WP_016503199.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997923.1;locus_tag=D5F94_RS04720;product=type I glutamate--ammonia ligase;protein_id=WP_016503199.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 40333 40842 . + . ID=gene-D5F94_RS04725;Name=D5F94_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04725;old_locus_tag=D5F94_04725 NZ_QYTD01000005.1 Protein Homology CDS 40333 40842 . + 0 ID=cds-WP_016503198.1;Parent=gene-D5F94_RS04725;Dbxref=GenBank:WP_016503198.1;Name=WP_016503198.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392201.1;locus_tag=D5F94_RS04725;product=CHAP domain-containing protein;protein_id=WP_016503198.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 41004 42683 . - . ID=gene-D5F94_RS04730;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=D5F94_RS04730;old_locus_tag=D5F94_04730 NZ_QYTD01000005.1 Protein Homology CDS 41004 42683 . - 0 ID=cds-WP_000065493.1;Parent=gene-D5F94_RS04730;Dbxref=GenBank:WP_000065493.1;Name=WP_000065493.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632256.1;locus_tag=D5F94_RS04730;product=ribonuclease J1;protein_id=WP_000065493.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 42737 42967 . - . ID=gene-D5F94_RS04735;Name=D5F94_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04735;old_locus_tag=D5F94_04735 NZ_QYTD01000005.1 Protein Homology CDS 42737 42967 . - 0 ID=cds-WP_000639570.1;Parent=gene-D5F94_RS04735;Dbxref=GenBank:WP_000639570.1;Name=WP_000639570.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639570.1;locus_tag=D5F94_RS04735;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_000639570.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 43146 43838 . + . ID=gene-D5F94_RS04740;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=D5F94_RS04740;old_locus_tag=D5F94_04740 NZ_QYTD01000005.1 Protein Homology CDS 43146 43838 . + 0 ID=cds-WP_086163483.1;Parent=gene-D5F94_RS04740;Dbxref=GenBank:WP_086163483.1;Name=WP_086163483.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978607.1;locus_tag=D5F94_RS04740;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_086163483.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 43840 44247 . + . ID=gene-D5F94_RS04745;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D5F94_RS04745;old_locus_tag=D5F94_04745 NZ_QYTD01000005.1 Protein Homology CDS 43840 44247 . + 0 ID=cds-WP_000445943.1;Parent=gene-D5F94_RS04745;Dbxref=GenBank:WP_000445943.1;Name=WP_000445943.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643831.1;locus_tag=D5F94_RS04745;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_000445943.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 44323 45333 . + . ID=gene-D5F94_RS04750;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=D5F94_RS04750;old_locus_tag=D5F94_04750 NZ_QYTD01000005.1 Protein Homology CDS 44323 45333 . + 0 ID=cds-WP_016503196.1;Parent=gene-D5F94_RS04750;Dbxref=GenBank:WP_016503196.1;Name=WP_016503196.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655088.1;locus_tag=D5F94_RS04750;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_016503196.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 45452 46477 . + . ID=gene-D5F94_RS04755;Name=D5F94_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04755;old_locus_tag=D5F94_04755 NZ_QYTD01000005.1 Protein Homology CDS 45452 46477 . + 0 ID=cds-WP_016503195.1;Parent=gene-D5F94_RS04755;Dbxref=GenBank:WP_016503195.1;Name=WP_016503195.1;Ontology_term=GO:0006567,GO:0004793;gbkey=CDS;go_function=threonine aldolase activity|0004793||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503195.1;locus_tag=D5F94_RS04755;product=threonine aldolase family protein;protein_id=WP_016503195.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 46839 47108 . - . ID=gene-D5F94_RS04765;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=D5F94_RS04765;old_locus_tag=D5F94_04765 NZ_QYTD01000005.1 Protein Homology CDS 46839 47108 . - 0 ID=cds-WP_001085659.1;Parent=gene-D5F94_RS04765;Dbxref=GenBank:WP_001085659.1;Name=WP_001085659.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085658.1;locus_tag=D5F94_RS04765;product=30S ribosomal protein S14;protein_id=WP_001085659.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 47285 48049 . + . ID=gene-D5F94_RS04770;Name=D5F94_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04770;old_locus_tag=D5F94_04770 NZ_QYTD01000005.1 Protein Homology CDS 47285 48049 . + 0 ID=cds-WP_001005780.1;Parent=gene-D5F94_RS04770;Dbxref=GenBank:WP_001005780.1;Name=WP_001005780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005780.1;locus_tag=D5F94_RS04770;product=DUF4931 domain-containing protein;protein_id=WP_001005780.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 48093 49265 . - . ID=gene-D5F94_RS04775;Name=D5F94_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04775;old_locus_tag=D5F94_04775 NZ_QYTD01000005.1 Protein Homology CDS 48093 49265 . - 0 ID=cds-WP_000683564.1;Parent=gene-D5F94_RS04775;Dbxref=GenBank:WP_000683564.1;Name=WP_000683564.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632253.1;locus_tag=D5F94_RS04775;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000683564.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 49400 49936 . + . ID=gene-D5F94_RS04780;Name=D5F94_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04780;old_locus_tag=D5F94_04780 NZ_QYTD01000005.1 Protein Homology CDS 49400 49936 . + 0 ID=cds-WP_000215421.1;Parent=gene-D5F94_RS04780;Dbxref=GenBank:WP_000215421.1;Name=WP_000215421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766787.1;locus_tag=D5F94_RS04780;product=DUF536 domain-containing protein;protein_id=WP_000215421.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 49980 50567 . + . ID=gene-D5F94_RS04785;Name=D5F94_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04785;old_locus_tag=D5F94_04785 NZ_QYTD01000005.1 Protein Homology CDS 49980 50567 . + 0 ID=cds-WP_000811666.1;Parent=gene-D5F94_RS04785;Dbxref=GenBank:WP_000811666.1;Name=WP_000811666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650205.1;locus_tag=D5F94_RS04785;product=3'-5' exonuclease;protein_id=WP_000811666.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 50694 51419 . + . ID=gene-D5F94_RS04790;Name=D5F94_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04790;old_locus_tag=D5F94_04790 NZ_QYTD01000005.1 Protein Homology CDS 50694 51419 . + 0 ID=cds-WP_016503194.1;Parent=gene-D5F94_RS04790;Dbxref=GenBank:WP_016503194.1;Name=WP_016503194.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292015.1;locus_tag=D5F94_RS04790;product=MerR family transcriptional regulator;protein_id=WP_016503194.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 51489 52679 . - . ID=gene-D5F94_RS04795;Name=D5F94_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04795;old_locus_tag=D5F94_04795 NZ_QYTD01000005.1 Protein Homology CDS 51489 52679 . - 0 ID=cds-WP_000244914.1;Parent=gene-D5F94_RS04795;Dbxref=GenBank:WP_000244914.1;Name=WP_000244914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244913.1;locus_tag=D5F94_RS04795;product=SAM-dependent methyltransferase;protein_id=WP_000244914.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 52840 53139 . - . ID=gene-D5F94_RS04800;Name=D5F94_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04800;old_locus_tag=D5F94_04800 NZ_QYTD01000005.1 Protein Homology CDS 52840 53139 . - 0 ID=cds-WP_016503193.1;Parent=gene-D5F94_RS04800;Dbxref=GenBank:WP_016503193.1;Name=WP_016503193.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503193.1;locus_tag=D5F94_RS04800;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_016503193.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 53429 55009 . - . ID=gene-D5F94_RS04805;Name=D5F94_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04805;old_locus_tag=D5F94_04805 NZ_QYTD01000005.1 Protein Homology CDS 53429 55009 . - 0 ID=cds-WP_016503192.1;Parent=gene-D5F94_RS04805;Dbxref=GenBank:WP_016503192.1;Name=WP_016503192.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818745.1;locus_tag=D5F94_RS04805;product=type I restriction-modification system subunit M;protein_id=WP_016503192.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 55022 55216 . - . ID=gene-D5F94_RS04810;Name=D5F94_RS04810;end_range=55216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS04810;old_locus_tag=D5F94_04810;partial=true;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 55022 55216 . - 0 ID=cds-D5F94_RS04810;Parent=gene-D5F94_RS04810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006304,GO:0003677;end_range=55216,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011527759.1;locus_tag=D5F94_RS04810;partial=true;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 55428 56033 . + . ID=gene-D5F94_RS04815;Name=D5F94_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04815;old_locus_tag=D5F94_04815 NZ_QYTD01000005.1 Protein Homology CDS 55428 56033 . + 0 ID=cds-WP_124749431.1;Parent=gene-D5F94_RS04815;Dbxref=GenBank:WP_124749431.1;Name=WP_124749431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647983.1;locus_tag=D5F94_RS04815;product=hypothetical protein;protein_id=WP_124749431.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 56442 57341 . + . ID=gene-D5F94_RS04820;Name=D5F94_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04820;old_locus_tag=D5F94_04820 NZ_QYTD01000005.1 Protein Homology CDS 56442 57341 . + 0 ID=cds-WP_000174555.1;Parent=gene-D5F94_RS04820;Dbxref=GenBank:WP_000174555.1;Name=WP_000174555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174555.1;locus_tag=D5F94_RS04820;product=prenyltransferase;protein_id=WP_000174555.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 57354 58562 . + . ID=gene-D5F94_RS04825;Name=D5F94_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04825;old_locus_tag=D5F94_04825 NZ_QYTD01000005.1 Protein Homology CDS 57354 58562 . + 0 ID=cds-WP_000659003.1;Parent=gene-D5F94_RS04825;Dbxref=GenBank:WP_000659003.1;Name=WP_000659003.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659000.1;locus_tag=D5F94_RS04825;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000659003.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 58665 60092 . + . ID=gene-D5F94_RS04830;Name=D5F94_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04830;old_locus_tag=D5F94_04830 NZ_QYTD01000005.1 Protein Homology CDS 58665 60092 . + 0 ID=cds-WP_124749433.1;Parent=gene-D5F94_RS04830;Dbxref=GenBank:WP_124749433.1;Name=WP_124749433.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632249.1;locus_tag=D5F94_RS04830;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_124749433.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 60093 61112 . + . ID=gene-D5F94_RS04835;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=D5F94_RS04835;old_locus_tag=D5F94_04835 NZ_QYTD01000005.1 Protein Homology CDS 60093 61112 . + 0 ID=cds-WP_001275292.1;Parent=gene-D5F94_RS04835;Dbxref=GenBank:WP_001275292.1;Name=WP_001275292.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275291.1;locus_tag=D5F94_RS04835;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_001275292.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 61112 62830 . + . ID=gene-D5F94_RS04840;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=D5F94_RS04840;old_locus_tag=D5F94_04840 NZ_QYTD01000005.1 Protein Homology CDS 61112 62830 . + 0 ID=cds-WP_000884538.1;Parent=gene-D5F94_RS04840;Dbxref=GenBank:WP_000884538.1;Name=WP_000884538.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632247.1;locus_tag=D5F94_RS04840;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_000884538.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 62823 64571 . + . ID=gene-D5F94_RS04845;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=D5F94_RS04845;old_locus_tag=D5F94_04845 NZ_QYTD01000005.1 Protein Homology CDS 62823 64571 . + 0 ID=cds-WP_000472836.1;Parent=gene-D5F94_RS04845;Dbxref=GenBank:WP_000472836.1;Name=WP_000472836.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472828.1;locus_tag=D5F94_RS04845;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_000472836.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 64656 65636 . - . ID=gene-D5F94_RS04850;Name=D5F94_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04850;old_locus_tag=D5F94_04850 NZ_QYTD01000005.1 Protein Homology CDS 64656 65636 . - 0 ID=cds-WP_016481182.1;Parent=gene-D5F94_RS04850;Dbxref=GenBank:WP_016481182.1;Name=WP_016481182.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481182.1;locus_tag=D5F94_RS04850;product=polyprenyl synthetase family protein;protein_id=WP_016481182.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 65682 66041 . - . ID=gene-D5F94_RS04855;Name=D5F94_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04855;old_locus_tag=D5F94_04855 NZ_QYTD01000005.1 Protein Homology CDS 65682 66041 . - 0 ID=cds-WP_000771943.1;Parent=gene-D5F94_RS04855;Dbxref=GenBank:WP_000771943.1;Name=WP_000771943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000771945.1;locus_tag=D5F94_RS04855;product=hypothetical protein;protein_id=WP_000771943.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 66045 68330 . - . ID=gene-D5F94_RS04860;Name=D5F94_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04860;old_locus_tag=D5F94_04860 NZ_QYTD01000005.1 Protein Homology CDS 66045 68330 . - 0 ID=cds-WP_016503188.1;Parent=gene-D5F94_RS04860;Dbxref=GenBank:WP_016503188.1;Name=WP_016503188.1;Ontology_term=GO:0006508,GO:0008239;gbkey=CDS;go_function=dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270186.1;locus_tag=D5F94_RS04860;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_016503188.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 68354 69013 . - . ID=gene-D5F94_RS04865;Name=D5F94_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04865;old_locus_tag=D5F94_04865 NZ_QYTD01000005.1 Protein Homology CDS 68354 69013 . - 0 ID=cds-WP_001016380.1;Parent=gene-D5F94_RS04865;Dbxref=GenBank:WP_001016380.1;Name=WP_001016380.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646447.1;locus_tag=D5F94_RS04865;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001016380.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 69169 70371 . + . ID=gene-D5F94_RS04870;Name=D5F94_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04870;old_locus_tag=D5F94_04870 NZ_QYTD01000005.1 Protein Homology CDS 69169 70371 . + 0 ID=cds-WP_000389617.1;Parent=gene-D5F94_RS04870;Dbxref=GenBank:WP_000389617.1;Name=WP_000389617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389619.1;locus_tag=D5F94_RS04870;product=MFS transporter;protein_id=WP_000389617.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 70389 70841 . + . ID=gene-D5F94_RS04875;Name=D5F94_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04875;old_locus_tag=D5F94_04875 NZ_QYTD01000005.1 Protein Homology CDS 70389 70841 . + 0 ID=cds-WP_000192462.1;Parent=gene-D5F94_RS04875;Dbxref=GenBank:WP_000192462.1;Name=WP_000192462.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645875.1;locus_tag=D5F94_RS04875;product=universal stress protein;protein_id=WP_000192462.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 71010 71858 . + . ID=gene-D5F94_RS04880;Name=gla;gbkey=Gene;gene=gla;gene_biotype=protein_coding;locus_tag=D5F94_RS04880;old_locus_tag=D5F94_04880 NZ_QYTD01000005.1 Protein Homology CDS 71010 71858 . + 0 ID=cds-WP_000570241.1;Parent=gene-D5F94_RS04880;Dbxref=GenBank:WP_000570241.1;Name=WP_000570241.1;Ontology_term=GO:0006071,GO:0015267;gbkey=CDS;gene=gla;go_function=channel activity|0015267||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570237.1;locus_tag=D5F94_RS04880;product=aquaglyceroporin Gla;protein_id=WP_000570241.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 71936 72832 . - . ID=gene-D5F94_RS04885;Name=D5F94_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04885;old_locus_tag=D5F94_04885 NZ_QYTD01000005.1 Protein Homology CDS 71936 72832 . - 0 ID=cds-WP_001006192.1;Parent=gene-D5F94_RS04885;Dbxref=GenBank:WP_001006192.1;Name=WP_001006192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768349.1;locus_tag=D5F94_RS04885;product=sulfite exporter TauE/SafE family protein;protein_id=WP_001006192.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 72957 73712 . + . ID=gene-D5F94_RS04890;Name=D5F94_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04890;old_locus_tag=D5F94_04890 NZ_QYTD01000005.1 Protein Homology CDS 72957 73712 . + 0 ID=cds-WP_016481180.1;Parent=gene-D5F94_RS04890;Dbxref=GenBank:WP_016481180.1;Name=WP_016481180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171837.1;locus_tag=D5F94_RS04890;product=CppA family protein;protein_id=WP_016481180.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 73709 74638 . + . ID=gene-D5F94_RS04895;Name=D5F94_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04895;old_locus_tag=D5F94_04895 NZ_QYTD01000005.1 Protein Homology CDS 73709 74638 . + 0 ID=cds-WP_016503185.1;Parent=gene-D5F94_RS04895;Dbxref=GenBank:WP_016503185.1;Name=WP_016503185.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598173.1;locus_tag=D5F94_RS04895;product=serine hydrolase domain-containing protein;protein_id=WP_016503185.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 74673 75047 . - . ID=gene-D5F94_RS04900;Name=D5F94_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04900;old_locus_tag=D5F94_04900 NZ_QYTD01000005.1 Protein Homology CDS 74673 75047 . - 0 ID=cds-WP_000931879.1;Parent=gene-D5F94_RS04900;Dbxref=GenBank:WP_000931879.1;Name=WP_000931879.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000931877.1;locus_tag=D5F94_RS04900;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000931879.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 75148 77460 . - . ID=gene-D5F94_RS04905;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=D5F94_RS04905;old_locus_tag=D5F94_04905 NZ_QYTD01000005.1 Protein Homology CDS 75148 77460 . - 0 ID=cds-WP_016503184.1;Parent=gene-D5F94_RS04905;Dbxref=GenBank:WP_016503184.1;Name=WP_016503184.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503184.1;locus_tag=D5F94_RS04905;product=formate C-acetyltransferase;protein_id=WP_016503184.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 77645 78739 . + . ID=gene-D5F94_RS04910;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=D5F94_RS04910;old_locus_tag=D5F94_04910 NZ_QYTD01000005.1 Protein Homology CDS 77645 78739 . + 0 ID=cds-WP_000904560.1;Parent=gene-D5F94_RS04910;Dbxref=GenBank:WP_000904560.1;Name=WP_000904560.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904560.1;locus_tag=D5F94_RS04910;product=DNA polymerase IV;protein_id=WP_000904560.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 78810 79292 . - . ID=gene-D5F94_RS04915;Name=D5F94_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04915;old_locus_tag=D5F94_04915 NZ_QYTD01000005.1 Protein Homology CDS 78810 79292 . - 0 ID=cds-WP_000255475.1;Parent=gene-D5F94_RS04915;Dbxref=GenBank:WP_000255475.1;Name=WP_000255475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255479.1;locus_tag=D5F94_RS04915;product=hypothetical protein;protein_id=WP_000255475.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 79624 81826 . - . ID=gene-D5F94_RS04920;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=pseudogene;locus_tag=D5F94_RS04920;old_locus_tag=D5F94_04920;partial=true;pseudo=true;start_range=.,79624 NZ_QYTD01000005.1 Protein Homology CDS 79624 81826 . - 0 ID=cds-D5F94_RS04920;Parent=gene-D5F94_RS04920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019804593.1;locus_tag=D5F94_RS04920;partial=true;product=SF1B family DNA helicase RecD2;pseudo=true;start_range=.,79624;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 81955 82548 . - . ID=gene-D5F94_RS04925;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F94_RS04925;old_locus_tag=D5F94_04925 NZ_QYTD01000005.1 Protein Homology CDS 81955 82548 . - 0 ID=cds-WP_000657514.1;Parent=gene-D5F94_RS04925;Dbxref=GenBank:WP_000657514.1;Name=WP_000657514.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657511.1;locus_tag=D5F94_RS04925;product=signal peptidase I;protein_id=WP_000657514.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 82564 83457 . - . ID=gene-D5F94_RS04930;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=D5F94_RS04930;old_locus_tag=D5F94_04930 NZ_QYTD01000005.1 Protein Homology CDS 82564 83457 . - 0 ID=cds-WP_016503181.1;Parent=gene-D5F94_RS04930;Dbxref=GenBank:WP_016503181.1;Name=WP_016503181.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771143.1;locus_tag=D5F94_RS04930;product=ribonuclease HIII;protein_id=WP_016503181.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 83568 83879 . + . ID=gene-D5F94_RS04935;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=D5F94_RS04935;old_locus_tag=D5F94_04935 NZ_QYTD01000005.1 Protein Homology CDS 83568 83879 . + 0 ID=cds-WP_000448289.1;Parent=gene-D5F94_RS04935;Dbxref=GenBank:WP_000448289.1;Name=WP_000448289.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000448289.1;locus_tag=D5F94_RS04935;product=cell division protein ZapA;protein_id=WP_000448289.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 83882 84424 . + . ID=gene-D5F94_RS04940;Name=D5F94_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04940;old_locus_tag=D5F94_04940 NZ_QYTD01000005.1 Protein Homology CDS 83882 84424 . + 0 ID=cds-WP_000949956.1;Parent=gene-D5F94_RS04940;Dbxref=GenBank:WP_000949956.1;Name=WP_000949956.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949955.1;locus_tag=D5F94_RS04940;product=CvpA family protein;protein_id=WP_000949956.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 84509 86848 . + . ID=gene-D5F94_RS04945;Name=D5F94_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04945;old_locus_tag=D5F94_04945 NZ_QYTD01000005.1 Protein Homology CDS 84509 86848 . + 0 ID=cds-WP_001060323.1;Parent=gene-D5F94_RS04945;Dbxref=GenBank:WP_001060323.1;Name=WP_001060323.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650215.1;locus_tag=D5F94_RS04945;product=endonuclease MutS2;protein_id=WP_001060323.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 86852 87352 . + . ID=gene-D5F94_RS04950;Name=D5F94_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04950;old_locus_tag=D5F94_04950 NZ_QYTD01000005.1 Protein Homology CDS 86852 87352 . + 0 ID=cds-WP_000446812.1;Parent=gene-D5F94_RS04950;Dbxref=GenBank:WP_000446812.1;Name=WP_000446812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767232.1;locus_tag=D5F94_RS04950;product=phosphatase PAP2 family protein;protein_id=WP_000446812.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 87415 87747 . + . ID=gene-D5F94_RS04955;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D5F94_RS04955;old_locus_tag=D5F94_04955 NZ_QYTD01000005.1 Protein Homology CDS 87415 87747 . + 0 ID=cds-WP_001932060.1;Parent=gene-D5F94_RS04955;Dbxref=GenBank:WP_001932060.1;Name=WP_001932060.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001162959.1;locus_tag=D5F94_RS04955;product=thioredoxin;protein_id=WP_001932060.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 87793 88386 . - . ID=gene-D5F94_RS04960;Name=D5F94_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04960;old_locus_tag=D5F94_04960 NZ_QYTD01000005.1 Protein Homology CDS 87793 88386 . - 0 ID=cds-WP_016503178.1;Parent=gene-D5F94_RS04960;Dbxref=GenBank:WP_016503178.1;Name=WP_016503178.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402392.1;locus_tag=D5F94_RS04960;product=helix-turn-helix domain-containing protein;protein_id=WP_016503178.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 88563 89717 . - . ID=gene-D5F94_RS04965;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=D5F94_RS04965;old_locus_tag=D5F94_04965 NZ_QYTD01000005.1 Protein Homology CDS 88563 89717 . - 0 ID=cds-WP_311766400.1;Parent=gene-D5F94_RS04965;Dbxref=GenBank:WP_311766400.1;Name=WP_311766400.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983107.1;locus_tag=D5F94_RS04965;product=A/G-specific adenine glycosylase;protein_id=WP_311766400.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 90780 91067 . + . ID=gene-D5F94_RS04970;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=D5F94_RS04970;old_locus_tag=D5F94_04970 NZ_QYTD01000005.1 Protein Homology CDS 90780 91067 . + 0 ID=cds-WP_001151773.1;Parent=gene-D5F94_RS04970;Dbxref=GenBank:WP_001151773.1;Name=WP_001151773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151773.1;locus_tag=D5F94_RS04970;product=30S ribosomal protein S6;protein_id=WP_001151773.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 91079 91570 . + . ID=gene-D5F94_RS04975;Name=D5F94_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04975;old_locus_tag=D5F94_04975 NZ_QYTD01000005.1 Protein Homology CDS 91079 91570 . + 0 ID=cds-WP_000609586.1;Parent=gene-D5F94_RS04975;Dbxref=GenBank:WP_000609586.1;Name=WP_000609586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083754.1;locus_tag=D5F94_RS04975;product=single-stranded DNA-binding protein;protein_id=WP_000609586.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 91615 91854 . + . ID=gene-D5F94_RS04980;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=D5F94_RS04980;old_locus_tag=D5F94_04980 NZ_QYTD01000005.1 Protein Homology CDS 91615 91854 . + 0 ID=cds-WP_000068665.1;Parent=gene-D5F94_RS04980;Dbxref=GenBank:WP_000068665.1;Name=WP_000068665.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=D5F94_RS04980;product=30S ribosomal protein S18;protein_id=WP_000068665.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 92024 92968 . + . ID=gene-D5F94_RS04985;Name=D5F94_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04985;old_locus_tag=D5F94_04985 NZ_QYTD01000005.1 Protein Homology CDS 92024 92968 . + 0 ID=cds-WP_000812121.1;Parent=gene-D5F94_RS04985;Dbxref=GenBank:WP_000812121.1;Name=WP_000812121.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003085337.1;locus_tag=D5F94_RS04985;product=magnesium transporter CorA family protein;protein_id=WP_000812121.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 92993 93664 . + . ID=gene-D5F94_RS04990;Name=D5F94_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS04990;old_locus_tag=D5F94_04990 NZ_QYTD01000005.1 Protein Homology CDS 92993 93664 . + 0 ID=cds-WP_124749435.1;Parent=gene-D5F94_RS04990;Dbxref=GenBank:WP_124749435.1;Name=WP_124749435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174850.1;locus_tag=D5F94_RS04990;product=DUF1129 domain-containing protein;protein_id=WP_124749435.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 93796 96624 . + . ID=gene-D5F94_RS04995;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=D5F94_RS04995;old_locus_tag=D5F94_04995 NZ_QYTD01000005.1 Protein Homology CDS 93796 96624 . + 0 ID=cds-WP_016503174.1;Parent=gene-D5F94_RS04995;Dbxref=GenBank:WP_016503174.1;Name=WP_016503174.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001932063.1;locus_tag=D5F94_RS04995;product=excinuclease ABC subunit UvrA;protein_id=WP_016503174.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 96960 98459 . + . ID=gene-D5F94_RS05005;Name=D5F94_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05005;old_locus_tag=D5F94_05005 NZ_QYTD01000005.1 Protein Homology CDS 96960 98459 . + 0 ID=cds-WP_000208365.1;Parent=gene-D5F94_RS05005;Dbxref=GenBank:WP_000208365.1;Name=WP_000208365.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208358.1;locus_tag=D5F94_RS05005;product=MDR family MFS transporter;protein_id=WP_000208365.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 98461 99177 . + . ID=gene-D5F94_RS05010;Name=D5F94_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05010;old_locus_tag=D5F94_05010 NZ_QYTD01000005.1 Protein Homology CDS 98461 99177 . + 0 ID=cds-WP_016503171.1;Parent=gene-D5F94_RS05010;Dbxref=GenBank:WP_016503171.1;Name=WP_016503171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584725.1;locus_tag=D5F94_RS05010;product=DUF4811 domain-containing protein;protein_id=WP_016503171.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 99277 100344 . + . ID=gene-D5F94_RS05015;Name=D5F94_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05015;old_locus_tag=D5F94_05015 NZ_QYTD01000005.1 Protein Homology CDS 99277 100344 . + 0 ID=cds-WP_016503170.1;Parent=gene-D5F94_RS05015;Dbxref=GenBank:WP_016503170.1;Name=WP_016503170.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505344.1;locus_tag=D5F94_RS05015;product=M24 family metallopeptidase;protein_id=WP_016503170.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 100356 100808 . + . ID=gene-D5F94_RS05020;Name=D5F94_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05020;old_locus_tag=D5F94_05020 NZ_QYTD01000005.1 Protein Homology CDS 100356 100808 . + 0 ID=cds-WP_001081097.1;Parent=gene-D5F94_RS05020;Dbxref=GenBank:WP_001081097.1;Name=WP_001081097.1;Ontology_term=GO:0006220,GO:0009972,GO:0004132,GO:0008270;gbkey=CDS;go_function=dCMP deaminase activity|0004132||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine nucleotide metabolic process|0006220||IEA,obsolete cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644130.1;locus_tag=D5F94_RS05020;product=deoxycytidylate deaminase;protein_id=WP_001081097.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 101110 101274 . + . ID=gene-D5F94_RS05030;Name=D5F94_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05030;old_locus_tag=D5F94_05030 NZ_QYTD01000005.1 Protein Homology CDS 101110 101274 . + 0 ID=cds-WP_000927757.1;Parent=gene-D5F94_RS05030;Dbxref=GenBank:WP_000927757.1;Name=WP_000927757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927757.1;locus_tag=D5F94_RS05030;product=hypothetical protein;protein_id=WP_000927757.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 101410 101850 . + . ID=gene-D5F94_RS05040;Name=D5F94_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05040;old_locus_tag=D5F94_05040 NZ_QYTD01000005.1 Protein Homology CDS 101410 101850 . + 0 ID=cds-WP_000927730.1;Parent=gene-D5F94_RS05040;Dbxref=GenBank:WP_000927730.1;Name=WP_000927730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927732.1;locus_tag=D5F94_RS05040;product=hypothetical protein;protein_id=WP_000927730.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 101863 102033 . + . ID=gene-D5F94_RS05045;Name=D5F94_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05045;old_locus_tag=D5F94_05045 NZ_QYTD01000005.1 Protein Homology CDS 101863 102033 . + 0 ID=cds-WP_016503167.1;Parent=gene-D5F94_RS05045;Dbxref=GenBank:WP_016503167.1;Name=WP_016503167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649347.1;locus_tag=D5F94_RS05045;product=hypothetical protein;protein_id=WP_016503167.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 102046 102277 . + . ID=gene-D5F94_RS05050;Name=D5F94_RS05050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05050;old_locus_tag=D5F94_05050;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 102046 102277 . + 0 ID=cds-D5F94_RS05050;Parent=gene-D5F94_RS05050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511720.1;locus_tag=D5F94_RS05050;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 102764 103006 . + . ID=gene-D5F94_RS05060;Name=D5F94_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05060;old_locus_tag=D5F94_05060 NZ_QYTD01000005.1 Protein Homology CDS 102764 103006 . + 0 ID=cds-WP_223297784.1;Parent=gene-D5F94_RS05060;Dbxref=GenBank:WP_223297784.1;Name=WP_223297784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926392.1;locus_tag=D5F94_RS05060;product=DUF4176 domain-containing protein;protein_id=WP_223297784.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 103933 104493 . + . ID=gene-D5F94_RS05075;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=D5F94_RS05075;old_locus_tag=D5F94_05075 NZ_QYTD01000005.1 Protein Homology CDS 103933 104493 . + 0 ID=cds-WP_000568636.1;Parent=gene-D5F94_RS05075;Dbxref=GenBank:WP_000568636.1;Name=WP_000568636.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=D5F94_RS05075;product=elongation factor P;protein_id=WP_000568636.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 104582 104971 . + . ID=gene-D5F94_RS05080;Name=D5F94_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05080;old_locus_tag=D5F94_05080 NZ_QYTD01000005.1 Protein Homology CDS 104582 104971 . + 0 ID=cds-WP_000206139.1;Parent=gene-D5F94_RS05080;Dbxref=GenBank:WP_000206139.1;Name=WP_000206139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335250.1;locus_tag=D5F94_RS05080;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_000206139.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 104964 105398 . + . ID=gene-D5F94_RS05085;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=D5F94_RS05085;old_locus_tag=D5F94_05085 NZ_QYTD01000005.1 Protein Homology CDS 104964 105398 . + 0 ID=cds-WP_016503165.1;Parent=gene-D5F94_RS05085;Dbxref=GenBank:WP_016503165.1;Name=WP_016503165.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204941.1;locus_tag=D5F94_RS05085;product=transcription antitermination factor NusB;protein_id=WP_016503165.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 105482 106444 . - . ID=gene-D5F94_RS05090;Name=D5F94_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05090;old_locus_tag=D5F94_05090 NZ_QYTD01000005.1 Protein Homology CDS 105482 106444 . - 0 ID=cds-WP_000225972.1;Parent=gene-D5F94_RS05090;Dbxref=GenBank:WP_000225972.1;Name=WP_000225972.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225970.1;locus_tag=D5F94_RS05090;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000225972.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 106446 107885 . - . ID=gene-D5F94_RS05095;Name=D5F94_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05095;old_locus_tag=D5F94_05095 NZ_QYTD01000005.1 Protein Homology CDS 106446 107885 . - 0 ID=cds-WP_016503164.1;Parent=gene-D5F94_RS05095;Dbxref=GenBank:WP_016503164.1;Name=WP_016503164.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053047.1;locus_tag=D5F94_RS05095;product=sucrose-6-phosphate hydrolase;protein_id=WP_016503164.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 108070 109989 . + . ID=gene-D5F94_RS05100;Name=D5F94_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05100;old_locus_tag=D5F94_05100 NZ_QYTD01000005.1 Protein Homology CDS 108070 109989 . + 0 ID=cds-WP_016503163.1;Parent=gene-D5F94_RS05100;Dbxref=GenBank:WP_016503163.1;Name=WP_016503163.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645604.1;locus_tag=D5F94_RS05100;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_016503163.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 110057 110751 . + . ID=gene-D5F94_RS05105;Name=D5F94_RS05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05105;old_locus_tag=D5F94_05105;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 110057 110751 . + 0 ID=cds-D5F94_RS05105;Parent=gene-D5F94_RS05105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646443.1;locus_tag=D5F94_RS05105;product=ROK family protein;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 110869 111816 . + . ID=gene-D5F94_RS05110;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=D5F94_RS05110;old_locus_tag=D5F94_05110 NZ_QYTD01000005.1 Protein Homology CDS 110869 111816 . + 0 ID=cds-WP_124749130.1;Parent=gene-D5F94_RS05110;Dbxref=GenBank:WP_124749130.1;Name=WP_124749130.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294260.1;locus_tag=D5F94_RS05110;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_124749130.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 111925 114453 . + . ID=gene-D5F94_RS05115;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=D5F94_RS05115;old_locus_tag=D5F94_05115 NZ_QYTD01000005.1 Protein Homology CDS 111925 114453 . + 0 ID=cds-WP_016503159.1;Parent=gene-D5F94_RS05115;Dbxref=GenBank:WP_016503159.1;Name=WP_016503159.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648626.1;locus_tag=D5F94_RS05115;product=preprotein translocase subunit SecA;protein_id=WP_016503159.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 114579 115586 . + . ID=gene-D5F94_RS05120;Name=D5F94_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05120;old_locus_tag=D5F94_05120 NZ_QYTD01000005.1 Protein Homology CDS 114579 115586 . + 0 ID=cds-WP_086163474.1;Parent=gene-D5F94_RS05120;Dbxref=GenBank:WP_086163474.1;Name=WP_086163474.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285097.1;locus_tag=D5F94_RS05120;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_086163474.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 115611 115970 . + . ID=gene-D5F94_RS05125;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=D5F94_RS05125;old_locus_tag=D5F94_05125 NZ_QYTD01000005.1 Protein Homology CDS 115611 115970 . + 0 ID=cds-WP_000635015.1;Parent=gene-D5F94_RS05125;Dbxref=GenBank:WP_000635015.1;Name=WP_000635015.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635015.1;locus_tag=D5F94_RS05125;product=holo-ACP synthase;protein_id=WP_000635015.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 115967 117067 . + . ID=gene-D5F94_RS05130;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=D5F94_RS05130;old_locus_tag=D5F94_05130 NZ_QYTD01000005.1 Protein Homology CDS 115967 117067 . + 0 ID=cds-WP_000625946.1;Parent=gene-D5F94_RS05130;Dbxref=GenBank:WP_000625946.1;Name=WP_000625946.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625941.1;locus_tag=D5F94_RS05130;product=alanine racemase;protein_id=WP_000625946.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 117160 118698 . + . ID=gene-D5F94_RS05135;Name=D5F94_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05135;old_locus_tag=D5F94_05135 NZ_QYTD01000005.1 Protein Homology CDS 117160 118698 . + 0 ID=cds-WP_124749437.1;Parent=gene-D5F94_RS05135;Dbxref=GenBank:WP_124749437.1;Name=WP_124749437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649924.1;locus_tag=D5F94_RS05135;product=CHAP domain-containing protein;protein_id=WP_124749437.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 118778 120793 . + . ID=gene-D5F94_RS05140;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=D5F94_RS05140;old_locus_tag=D5F94_05140 NZ_QYTD01000005.1 Protein Homology CDS 118778 120793 . + 0 ID=cds-WP_086163472.1;Parent=gene-D5F94_RS05140;Dbxref=GenBank:WP_086163472.1;Name=WP_086163472.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926642.1;locus_tag=D5F94_RS05140;product=ATP-dependent DNA helicase RecG;protein_id=WP_086163472.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 121085 121999 . + . ID=gene-D5F94_RS05145;Name=D5F94_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05145;old_locus_tag=D5F94_05145 NZ_QYTD01000005.1 Protein Homology CDS 121085 121999 . + 0 ID=cds-WP_016503154.1;Parent=gene-D5F94_RS05145;Dbxref=GenBank:WP_016503154.1;Name=WP_016503154.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503154.1;locus_tag=D5F94_RS05145;product=aldo/keto reductase;protein_id=WP_016503154.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 122097 122975 . + . ID=gene-D5F94_RS05150;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=D5F94_RS05150;old_locus_tag=D5F94_05150 NZ_QYTD01000005.1 Protein Homology CDS 122097 122975 . + 0 ID=cds-WP_001086864.1;Parent=gene-D5F94_RS05150;Dbxref=GenBank:WP_001086864.1;Name=WP_001086864.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481154.1;locus_tag=D5F94_RS05150;product=shikimate dehydrogenase;protein_id=WP_001086864.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 123010 123972 . - . ID=gene-D5F94_RS05155;Name=D5F94_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05155;old_locus_tag=D5F94_05155 NZ_QYTD01000005.1 Protein Homology CDS 123010 123972 . - 0 ID=cds-WP_000723060.1;Parent=gene-D5F94_RS05155;Dbxref=GenBank:WP_000723060.1;Name=WP_000723060.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643115.1;locus_tag=D5F94_RS05155;product=asparaginase;protein_id=WP_000723060.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 124041 125423 . + . ID=gene-D5F94_RS05160;Name=D5F94_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05160;old_locus_tag=D5F94_05160 NZ_QYTD01000005.1 Protein Homology CDS 124041 125423 . + 0 ID=cds-WP_016503151.1;Parent=gene-D5F94_RS05160;Dbxref=GenBank:WP_016503151.1;Name=WP_016503151.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503151.1;locus_tag=D5F94_RS05160;product=HAD-IIB family hydrolase;protein_id=WP_016503151.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 125479 125931 . - . ID=gene-D5F94_RS05165;Name=D5F94_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05165;old_locus_tag=D5F94_05165 NZ_QYTD01000005.1 Protein Homology CDS 125479 125931 . - 0 ID=cds-WP_000080032.1;Parent=gene-D5F94_RS05165;Dbxref=GenBank:WP_000080032.1;Name=WP_000080032.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080031.1;locus_tag=D5F94_RS05165;product=universal stress protein;protein_id=WP_000080032.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 126198 127409 . + . ID=gene-D5F94_RS05170;Name=D5F94_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05170;old_locus_tag=D5F94_05170 NZ_QYTD01000005.1 Protein Homology CDS 126198 127409 . + 0 ID=cds-WP_000688108.1;Parent=gene-D5F94_RS05170;Dbxref=GenBank:WP_000688108.1;Name=WP_000688108.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836593.1;locus_tag=D5F94_RS05170;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000688108.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 127535 128321 . + . ID=gene-D5F94_RS05175;Name=codY;gbkey=Gene;gene=codY;gene_biotype=pseudogene;locus_tag=D5F94_RS05175;old_locus_tag=D5F94_05175;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 127535 128321 . + 0 ID=cds-D5F94_RS05175;Parent=gene-D5F94_RS05175;Note=frameshifted;Ontology_term=GO:0045892,GO:0003677,GO:0003700,GO:0005525;gbkey=CDS;gene=codY;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,GTP binding|0005525||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133183.1;locus_tag=D5F94_RS05175;product=GTP-sensing pleiotropic transcriptional regulator CodY;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 128388 128936 . + . ID=gene-D5F94_RS05180;Name=D5F94_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05180;old_locus_tag=D5F94_05180 NZ_QYTD01000005.1 Protein Homology CDS 128388 128936 . + 0 ID=cds-WP_016503150.1;Parent=gene-D5F94_RS05180;Dbxref=GenBank:WP_016503150.1;Name=WP_016503150.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503150.1;locus_tag=D5F94_RS05180;product=cysteine hydrolase family protein;protein_id=WP_016503150.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 128983 129963 . - . ID=gene-D5F94_RS05185;Name=D5F94_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05185;old_locus_tag=D5F94_05185 NZ_QYTD01000005.1 Protein Homology CDS 128983 129963 . - 0 ID=cds-WP_260424803.1;Parent=gene-D5F94_RS05185;Dbxref=GenBank:WP_260424803.1;Name=WP_260424803.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001933008.1;locus_tag=D5F94_RS05185;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_260424803.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 130137 130766 . + . ID=gene-D5F94_RS05190;Name=D5F94_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05190;old_locus_tag=D5F94_05190 NZ_QYTD01000005.1 Protein Homology CDS 130137 130766 . + 0 ID=cds-WP_011074751.1;Parent=gene-D5F94_RS05190;Dbxref=GenBank:WP_011074751.1;Name=WP_011074751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074751.1;locus_tag=D5F94_RS05190;product=helix-turn-helix transcriptional regulator;protein_id=WP_011074751.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 130777 131631 . + . ID=gene-D5F94_RS05195;Name=D5F94_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05195;old_locus_tag=D5F94_05195 NZ_QYTD01000005.1 Protein Homology CDS 130777 131631 . + 0 ID=cds-WP_016503148.1;Parent=gene-D5F94_RS05195;Dbxref=GenBank:WP_016503148.1;Name=WP_016503148.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503148.1;locus_tag=D5F94_RS05195;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_016503148.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 131621 134266 . + . ID=gene-D5F94_RS05200;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=D5F94_RS05200;old_locus_tag=D5F94_05200 NZ_QYTD01000005.1 Protein Homology CDS 131621 134266 . + 0 ID=cds-WP_086163469.1;Parent=gene-D5F94_RS05200;Dbxref=GenBank:WP_086163469.1;Name=WP_086163469.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632219.1;locus_tag=D5F94_RS05200;product=pyruvate%2C phosphate dikinase;protein_id=WP_086163469.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 134404 134706 . + . ID=gene-D5F94_RS05205;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=D5F94_RS05205;old_locus_tag=D5F94_05205 NZ_QYTD01000005.1 Protein Homology CDS 134404 134706 . + 0 ID=cds-WP_000703033.1;Parent=gene-D5F94_RS05205;Dbxref=GenBank:WP_000703033.1;Name=WP_000703033.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147946.1;locus_tag=D5F94_RS05205;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_000703033.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 134706 136172 . + . ID=gene-D5F94_RS05210;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=D5F94_RS05210;old_locus_tag=D5F94_05210 NZ_QYTD01000005.1 Protein Homology CDS 134706 136172 . + 0 ID=cds-WP_086163468.1;Parent=gene-D5F94_RS05210;Dbxref=GenBank:WP_086163468.1;Name=WP_086163468.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295200.1;locus_tag=D5F94_RS05210;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_086163468.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 136172 137614 . + . ID=gene-D5F94_RS05215;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=D5F94_RS05215;old_locus_tag=D5F94_05215 NZ_QYTD01000005.1 Protein Homology CDS 136172 137614 . + 0 ID=cds-WP_001008627.1;Parent=gene-D5F94_RS05215;Dbxref=GenBank:WP_001008627.1;Name=WP_001008627.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946582.1;locus_tag=D5F94_RS05215;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_001008627.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 137744 138658 . + . ID=gene-D5F94_RS05220;Name=D5F94_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05220;old_locus_tag=D5F94_05220 NZ_QYTD01000005.1 Protein Homology CDS 137744 138658 . + 0 ID=cds-WP_124749439.1;Parent=gene-D5F94_RS05220;Dbxref=GenBank:WP_124749439.1;Name=WP_124749439.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161968.1;locus_tag=D5F94_RS05220;product=DMT family transporter;protein_id=WP_124749439.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 138775 139302 . + . ID=gene-D5F94_RS05225;Name=D5F94_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05225;old_locus_tag=D5F94_05225 NZ_QYTD01000005.1 Protein Homology CDS 138775 139302 . + 0 ID=cds-WP_000020580.1;Parent=gene-D5F94_RS05225;Dbxref=GenBank:WP_000020580.1;Name=WP_000020580.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612026.1;locus_tag=D5F94_RS05225;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_000020580.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 139302 140420 . + . ID=gene-D5F94_RS05230;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=D5F94_RS05230;old_locus_tag=D5F94_05230 NZ_QYTD01000005.1 Protein Homology CDS 139302 140420 . + 0 ID=cds-WP_016503143.1;Parent=gene-D5F94_RS05230;Dbxref=GenBank:WP_016503143.1;Name=WP_016503143.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018363769.1;locus_tag=D5F94_RS05230;product=ribosome biogenesis GTPase YqeH;protein_id=WP_016503143.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 140513 140830 . + . ID=gene-D5F94_RS05235;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=D5F94_RS05235;old_locus_tag=D5F94_05235 NZ_QYTD01000005.1 Protein Homology CDS 140513 140830 . + 0 ID=cds-WP_000958132.1;Parent=gene-D5F94_RS05235;Dbxref=GenBank:WP_000958132.1;Name=WP_000958132.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058732.1;locus_tag=D5F94_RS05235;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_000958132.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 140960 141592 . + . ID=gene-D5F94_RS05240;Name=D5F94_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05240;old_locus_tag=D5F94_05240 NZ_QYTD01000005.1 Protein Homology CDS 140960 141592 . + 0 ID=cds-WP_001162767.1;Parent=gene-D5F94_RS05240;Dbxref=GenBank:WP_001162767.1;Name=WP_001162767.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002313156.1;locus_tag=D5F94_RS05240;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001162767.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 141589 142176 . + . ID=gene-D5F94_RS05245;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=D5F94_RS05245;old_locus_tag=D5F94_05245 NZ_QYTD01000005.1 Protein Homology CDS 141589 142176 . + 0 ID=cds-WP_016503142.1;Parent=gene-D5F94_RS05245;Dbxref=GenBank:WP_016503142.1;Name=WP_016503142.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649401.1;locus_tag=D5F94_RS05245;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_016503142.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 142240 142761 . + . ID=gene-D5F94_RS05250;Name=D5F94_RS05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05250;old_locus_tag=D5F94_05250;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 142240 142761 . + 0 ID=cds-D5F94_RS05250;Parent=gene-D5F94_RS05250;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128172.1;locus_tag=D5F94_RS05250;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 142763 143119 . + . ID=gene-D5F94_RS05255;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=D5F94_RS05255;old_locus_tag=D5F94_05255 NZ_QYTD01000005.1 Protein Homology CDS 142763 143119 . + 0 ID=cds-WP_000136423.1;Parent=gene-D5F94_RS05255;Dbxref=GenBank:WP_000136423.1;Name=WP_000136423.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136425.1;locus_tag=D5F94_RS05255;product=ribosome silencing factor;protein_id=WP_000136423.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 143185 143919 . + . ID=gene-D5F94_RS05260;Name=D5F94_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05260;old_locus_tag=D5F94_05260 NZ_QYTD01000005.1 Protein Homology CDS 143185 143919 . + 0 ID=cds-WP_000257075.1;Parent=gene-D5F94_RS05260;Dbxref=GenBank:WP_000257075.1;Name=WP_000257075.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257057.1;locus_tag=D5F94_RS05260;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_000257075.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 143942 144193 . + . ID=gene-D5F94_RS05265;Name=D5F94_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05265;old_locus_tag=D5F94_05265 NZ_QYTD01000005.1 Protein Homology CDS 143942 144193 . + 0 ID=cds-WP_000583229.1;Parent=gene-D5F94_RS05265;Dbxref=GenBank:WP_000583229.1;Name=WP_000583229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583227.1;locus_tag=D5F94_RS05265;product=hypothetical protein;protein_id=WP_000583229.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 144190 145299 . + . ID=gene-D5F94_RS05270;Name=D5F94_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05270;old_locus_tag=D5F94_05270 NZ_QYTD01000005.1 Protein Homology CDS 144190 145299 . + 0 ID=cds-WP_016503141.1;Parent=gene-D5F94_RS05270;Dbxref=GenBank:WP_016503141.1;Name=WP_016503141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503141.1;locus_tag=D5F94_RS05270;product=nucleotidyltransferase;protein_id=WP_016503141.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 145392 146103 . + . ID=gene-D5F94_RS05275;Name=D5F94_RS05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05275;old_locus_tag=D5F94_05275;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 145392 146103 . + 0 ID=cds-D5F94_RS05275;Parent=gene-D5F94_RS05275;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859551.1;locus_tag=D5F94_RS05275;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 146242 146646 . + . ID=gene-D5F94_RS05280;Name=D5F94_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05280;old_locus_tag=D5F94_05280 NZ_QYTD01000005.1 Protein Homology CDS 146242 146646 . + 0 ID=cds-WP_000675691.1;Parent=gene-D5F94_RS05280;Dbxref=GenBank:WP_000675691.1;Name=WP_000675691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675692.1;locus_tag=D5F94_RS05280;product=cupin domain-containing protein;protein_id=WP_000675691.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 146912 147625 . - . ID=gene-D5F94_RS05285;Name=D5F94_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05285;old_locus_tag=D5F94_05285 NZ_QYTD01000005.1 Protein Homology CDS 146912 147625 . - 0 ID=cds-WP_016503138.1;Parent=gene-D5F94_RS05285;Dbxref=GenBank:WP_016503138.1;Name=WP_016503138.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767547.1;locus_tag=D5F94_RS05285;product=MIP/aquaporin family protein;protein_id=WP_016503138.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 147635 148009 . - . ID=gene-D5F94_RS05290;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=D5F94_RS05290;old_locus_tag=D5F94_05290 NZ_QYTD01000005.1 Protein Homology CDS 147635 148009 . - 0 ID=cds-WP_001279899.1;Parent=gene-D5F94_RS05290;Dbxref=GenBank:WP_001279899.1;Name=WP_001279899.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960428.1;locus_tag=D5F94_RS05290;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001279899.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 148009 148587 . - . ID=gene-D5F94_RS05295;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=D5F94_RS05295;old_locus_tag=D5F94_05295 NZ_QYTD01000005.1 Protein Homology CDS 148009 148587 . - 0 ID=cds-WP_000453281.1;Parent=gene-D5F94_RS05295;Dbxref=GenBank:WP_000453281.1;Name=WP_000453281.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453283.1;locus_tag=D5F94_RS05295;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000453281.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 148625 149614 . - . ID=gene-D5F94_RS05300;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=D5F94_RS05300;old_locus_tag=D5F94_05300 NZ_QYTD01000005.1 Protein Homology CDS 148625 149614 . - 0 ID=cds-WP_016481138.1;Parent=gene-D5F94_RS05300;Dbxref=GenBank:WP_016481138.1;Name=WP_016481138.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722658.1;locus_tag=D5F94_RS05300;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_016481138.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 149788 150324 . + . ID=gene-D5F94_RS05310;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=D5F94_RS05310;old_locus_tag=D5F94_05310 NZ_QYTD01000005.1 Protein Homology CDS 149788 150324 . + 0 ID=cds-WP_000204281.1;Parent=gene-D5F94_RS05310;Dbxref=GenBank:WP_000204281.1;Name=WP_000204281.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643895.1;locus_tag=D5F94_RS05310;product=dihydroxyacetone kinase transcriptional activator DhaS;protein_id=WP_000204281.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 150334 151320 . + . ID=gene-D5F94_RS05315;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=D5F94_RS05315;old_locus_tag=D5F94_05315 NZ_QYTD01000005.1 Protein Homology CDS 150334 151320 . + 0 ID=cds-WP_001232461.1;Parent=gene-D5F94_RS05315;Dbxref=GenBank:WP_001232461.1;Name=WP_001232461.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaQ;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285056.1;locus_tag=D5F94_RS05315;product=DhaKLM operon coactivator DhaQ;protein_id=WP_001232461.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 151438 152154 . + . ID=gene-D5F94_RS05325;Name=D5F94_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05325;old_locus_tag=D5F94_05325 NZ_QYTD01000005.1 Protein Homology CDS 151438 152154 . + 0 ID=cds-WP_016503133.1;Parent=gene-D5F94_RS05325;Dbxref=GenBank:WP_016503133.1;Name=WP_016503133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008088325.1;locus_tag=D5F94_RS05325;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_016503133.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 152309 152998 . + . ID=gene-D5F94_RS05335;Name=D5F94_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05335;old_locus_tag=D5F94_05335 NZ_QYTD01000005.1 Protein Homology CDS 152309 152998 . + 0 ID=cds-WP_000956422.1;Parent=gene-D5F94_RS05335;Dbxref=GenBank:WP_000956422.1;Name=WP_000956422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956417.1;locus_tag=D5F94_RS05335;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_000956422.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 153069 153932 . + . ID=gene-D5F94_RS05340;Name=D5F94_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05340;old_locus_tag=D5F94_05340 NZ_QYTD01000005.1 Protein Homology CDS 153069 153932 . + 0 ID=cds-WP_124749443.1;Parent=gene-D5F94_RS05340;Dbxref=GenBank:WP_124749443.1;Name=WP_124749443.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046727.1;locus_tag=D5F94_RS05340;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_124749443.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 154074 154898 . + . ID=gene-D5F94_RS05345;Name=D5F94_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05345;old_locus_tag=D5F94_05345 NZ_QYTD01000005.1 Protein Homology CDS 154074 154898 . + 0 ID=cds-WP_016503131.1;Parent=gene-D5F94_RS05345;Dbxref=GenBank:WP_016503131.1;Name=WP_016503131.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543698.1;locus_tag=D5F94_RS05345;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_016503131.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 155032 156408 . + . ID=gene-D5F94_RS05350;Name=D5F94_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05350;old_locus_tag=D5F94_05350 NZ_QYTD01000005.1 Protein Homology CDS 155032 156408 . + 0 ID=cds-WP_000176655.1;Parent=gene-D5F94_RS05350;Dbxref=GenBank:WP_000176655.1;Name=WP_000176655.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176659.1;locus_tag=D5F94_RS05350;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_000176655.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 156401 157471 . + . ID=gene-D5F94_RS05355;Name=D5F94_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05355;old_locus_tag=D5F94_05355 NZ_QYTD01000005.1 Protein Homology CDS 156401 157471 . + 0 ID=cds-WP_000032379.1;Parent=gene-D5F94_RS05355;Dbxref=GenBank:WP_000032379.1;Name=WP_000032379.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032379.1;locus_tag=D5F94_RS05355;product=methionine ABC transporter ATP-binding protein;protein_id=WP_000032379.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 157468 158160 . + . ID=gene-D5F94_RS05360;Name=D5F94_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05360;old_locus_tag=D5F94_05360 NZ_QYTD01000005.1 Protein Homology CDS 157468 158160 . + 0 ID=cds-WP_000574037.1;Parent=gene-D5F94_RS05360;Dbxref=GenBank:WP_000574037.1;Name=WP_000574037.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574038.1;locus_tag=D5F94_RS05360;product=methionine ABC transporter permease;protein_id=WP_000574037.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 158209 159264 . - . ID=gene-D5F94_RS05365;Name=D5F94_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05365;old_locus_tag=D5F94_05365 NZ_QYTD01000005.1 Protein Homology CDS 158209 159264 . - 0 ID=cds-WP_016503130.1;Parent=gene-D5F94_RS05365;Dbxref=GenBank:WP_016503130.1;Name=WP_016503130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632209.1;locus_tag=D5F94_RS05365;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_016503130.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 159378 160745 . - . ID=gene-D5F94_RS05370;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D5F94_RS05370;old_locus_tag=D5F94_05370 NZ_QYTD01000005.1 Protein Homology CDS 159378 160745 . - 0 ID=cds-WP_086163465.1;Parent=gene-D5F94_RS05370;Dbxref=GenBank:WP_086163465.1;Name=WP_086163465.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769341.1;locus_tag=D5F94_RS05370;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_086163465.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 160922 162130 . + . ID=gene-D5F94_RS05375;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=D5F94_RS05375;old_locus_tag=D5F94_05375 NZ_QYTD01000005.1 Protein Homology CDS 160922 162130 . + 0 ID=cds-WP_000819590.1;Parent=gene-D5F94_RS05375;Dbxref=GenBank:WP_000819590.1;Name=WP_000819590.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819595.1;locus_tag=D5F94_RS05375;product=serine/threonine transporter SstT;protein_id=WP_000819590.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 162299 162847 . + . ID=gene-D5F94_RS05380;Name=D5F94_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05380;old_locus_tag=D5F94_05380 NZ_QYTD01000005.1 Protein Homology CDS 162299 162847 . + 0 ID=cds-WP_001095696.1;Parent=gene-D5F94_RS05380;Dbxref=GenBank:WP_001095696.1;Name=WP_001095696.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095696.1;locus_tag=D5F94_RS05380;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=WP_001095696.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 162864 164540 . + . ID=gene-D5F94_RS05385;Name=D5F94_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05385;old_locus_tag=D5F94_05385 NZ_QYTD01000005.1 Protein Homology CDS 162864 164540 . + 0 ID=cds-WP_000651257.1;Parent=gene-D5F94_RS05385;Dbxref=GenBank:WP_000651257.1;Name=WP_000651257.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651253.1;locus_tag=D5F94_RS05385;product=ABC transporter ATP-binding protein;protein_id=WP_000651257.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 164533 165363 . + . ID=gene-D5F94_RS05390;Name=D5F94_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05390;old_locus_tag=D5F94_05390 NZ_QYTD01000005.1 Protein Homology CDS 164533 165363 . + 0 ID=cds-WP_016503127.1;Parent=gene-D5F94_RS05390;Dbxref=GenBank:WP_016503127.1;Name=WP_016503127.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503127.1;locus_tag=D5F94_RS05390;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_016503127.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 165398 166069 . - . ID=gene-D5F94_RS05395;Name=D5F94_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05395;old_locus_tag=D5F94_05395 NZ_QYTD01000005.1 Protein Homology CDS 165398 166069 . - 0 ID=cds-WP_016503126.1;Parent=gene-D5F94_RS05395;Dbxref=GenBank:WP_016503126.1;Name=WP_016503126.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850143.1;locus_tag=D5F94_RS05395;product=potassium channel family protein;protein_id=WP_016503126.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 166082 167461 . - . ID=gene-D5F94_RS05400;Name=D5F94_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05400;old_locus_tag=D5F94_05400 NZ_QYTD01000005.1 Protein Homology CDS 166082 167461 . - 0 ID=cds-WP_016503125.1;Parent=gene-D5F94_RS05400;Dbxref=GenBank:WP_016503125.1;Name=WP_016503125.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680110.1;locus_tag=D5F94_RS05400;product=TrkH family potassium uptake protein;protein_id=WP_016503125.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 167476 168189 . - . ID=gene-D5F94_RS05405;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=D5F94_RS05405;old_locus_tag=D5F94_05405 NZ_QYTD01000005.1 Protein Homology CDS 167476 168189 . - 0 ID=cds-WP_000188792.1;Parent=gene-D5F94_RS05405;Dbxref=GenBank:WP_000188792.1;Name=WP_000188792.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481130.1;locus_tag=D5F94_RS05405;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000188792.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 168317 168871 . + . ID=gene-D5F94_RS05410;Name=D5F94_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05410;old_locus_tag=D5F94_05410 NZ_QYTD01000005.1 Protein Homology CDS 168317 168871 . + 0 ID=cds-WP_000537055.1;Parent=gene-D5F94_RS05410;Dbxref=GenBank:WP_000537055.1;Name=WP_000537055.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537058.1;locus_tag=D5F94_RS05410;product=LemA family protein;protein_id=WP_000537055.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 168892 169782 . + . ID=gene-D5F94_RS05415;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=D5F94_RS05415;old_locus_tag=D5F94_05415 NZ_QYTD01000005.1 Protein Homology CDS 168892 169782 . + 0 ID=cds-WP_000966816.1;Parent=gene-D5F94_RS05415;Dbxref=GenBank:WP_000966816.1;Name=WP_000966816.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966825.1;locus_tag=D5F94_RS05415;product=zinc metalloprotease HtpX;protein_id=WP_000966816.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 169887 170420 . + . ID=gene-D5F94_RS05420;Name=D5F94_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05420;old_locus_tag=D5F94_05420 NZ_QYTD01000005.1 Protein Homology CDS 169887 170420 . + 0 ID=cds-WP_016503124.1;Parent=gene-D5F94_RS05420;Dbxref=GenBank:WP_016503124.1;Name=WP_016503124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927541.1;locus_tag=D5F94_RS05420;product=YceD family protein;protein_id=WP_016503124.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 170655 171344 . + . ID=gene-D5F94_RS05425;Name=D5F94_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05425;old_locus_tag=D5F94_05425 NZ_QYTD01000005.1 Protein Homology CDS 170655 171344 . + 0 ID=cds-WP_000516681.1;Parent=gene-D5F94_RS05425;Dbxref=GenBank:WP_000516681.1;Name=WP_000516681.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516681.1;locus_tag=D5F94_RS05425;product=response regulator transcription factor;protein_id=WP_000516681.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 171334 172839 . + . ID=gene-D5F94_RS05430;Name=D5F94_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05430;old_locus_tag=D5F94_05430 NZ_QYTD01000005.1 Protein Homology CDS 171334 172839 . + 0 ID=cds-WP_016503123.1;Parent=gene-D5F94_RS05430;Dbxref=GenBank:WP_016503123.1;Name=WP_016503123.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768333.1;locus_tag=D5F94_RS05430;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_016503123.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 172988 173467 . + . ID=gene-D5F94_RS05435;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=D5F94_RS05435;old_locus_tag=D5F94_05435 NZ_QYTD01000005.1 Protein Homology CDS 172988 173467 . + 0 ID=cds-WP_001203682.1;Parent=gene-D5F94_RS05435;Dbxref=GenBank:WP_001203682.1;Name=WP_001203682.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203682.1;locus_tag=D5F94_RS05435;product=transcriptional regulator NrdR;protein_id=WP_001203682.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 173467 174642 . + . ID=gene-D5F94_RS05440;Name=D5F94_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05440;old_locus_tag=D5F94_05440 NZ_QYTD01000005.1 Protein Homology CDS 173467 174642 . + 0 ID=cds-WP_016503122.1;Parent=gene-D5F94_RS05440;Dbxref=GenBank:WP_016503122.1;Name=WP_016503122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074514.1;locus_tag=D5F94_RS05440;product=DnaD domain protein;protein_id=WP_016503122.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 174639 175541 . + . ID=gene-D5F94_RS05445;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=D5F94_RS05445;old_locus_tag=D5F94_05445 NZ_QYTD01000005.1 Protein Homology CDS 174639 175541 . + 0 ID=cds-WP_016503121.1;Parent=gene-D5F94_RS05445;Dbxref=GenBank:WP_016503121.1;Name=WP_016503121.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481126.1;locus_tag=D5F94_RS05445;product=primosomal protein DnaI;protein_id=WP_016503121.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 175589 176899 . + . ID=gene-D5F94_RS05450;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=D5F94_RS05450;old_locus_tag=D5F94_05450 NZ_QYTD01000005.1 Protein Homology CDS 175589 176899 . + 0 ID=cds-WP_000244019.1;Parent=gene-D5F94_RS05450;Dbxref=GenBank:WP_000244019.1;Name=WP_000244019.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=D5F94_RS05450;product=ribosome biogenesis GTPase Der;protein_id=WP_000244019.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 177055 180153 . + . ID=gene-D5F94_RS05455;Name=D5F94_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05455;old_locus_tag=D5F94_05455 NZ_QYTD01000005.1 Protein Homology CDS 177055 180153 . + 0 ID=cds-WP_124749445.1;Parent=gene-D5F94_RS05455;Dbxref=GenBank:WP_124749445.1;Name=WP_124749445.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089139.1;locus_tag=D5F94_RS05455;product=DEAD/DEAH box helicase;protein_id=WP_124749445.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 180318 180935 . + . ID=gene-D5F94_RS05465;Name=D5F94_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05465;old_locus_tag=D5F94_05465 NZ_QYTD01000005.1 Protein Homology CDS 180318 180935 . + 0 ID=cds-WP_001079340.1;Parent=gene-D5F94_RS05465;Dbxref=GenBank:WP_001079340.1;Name=WP_001079340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058720.1;locus_tag=D5F94_RS05465;product=hypothetical protein;protein_id=WP_001079340.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 180945 182276 . + . ID=gene-D5F94_RS05470;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=D5F94_RS05470;old_locus_tag=D5F94_05470 NZ_QYTD01000005.1 Protein Homology CDS 180945 182276 . + 0 ID=cds-WP_016503117.1;Parent=gene-D5F94_RS05470;Dbxref=GenBank:WP_016503117.1;Name=WP_016503117.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058719.1;locus_tag=D5F94_RS05470;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_016503117.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 182362 182865 . + . ID=gene-D5F94_RS05475;Name=D5F94_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05475;old_locus_tag=D5F94_05475 NZ_QYTD01000005.1 Protein Homology CDS 182362 182865 . + 0 ID=cds-WP_016503116.1;Parent=gene-D5F94_RS05475;Dbxref=GenBank:WP_016503116.1;Name=WP_016503116.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586872.1;locus_tag=D5F94_RS05475;product=GNAT family N-acetyltransferase;protein_id=WP_016503116.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 182952 184754 . + . ID=gene-D5F94_RS05480;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=D5F94_RS05480;old_locus_tag=D5F94_05480 NZ_QYTD01000005.1 Protein Homology CDS 182952 184754 . + 0 ID=cds-WP_086163462.1;Parent=gene-D5F94_RS05480;Dbxref=GenBank:WP_086163462.1;Name=WP_086163462.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481122.1;locus_tag=D5F94_RS05480;product=endolytic transglycosylase MltG;protein_id=WP_086163462.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 184827 185309 . + . ID=gene-D5F94_RS05485;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=D5F94_RS05485;old_locus_tag=D5F94_05485 NZ_QYTD01000005.1 Protein Homology CDS 184827 185309 . + 0 ID=cds-WP_000818772.1;Parent=gene-D5F94_RS05485;Dbxref=GenBank:WP_000818772.1;Name=WP_000818772.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481121.1;locus_tag=D5F94_RS05485;product=transcription elongation factor GreA;protein_id=WP_000818772.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 185413 186873 . + . ID=gene-D5F94_RS05490;Name=D5F94_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05490;old_locus_tag=D5F94_05490 NZ_QYTD01000005.1 Protein Homology CDS 185413 186873 . + 0 ID=cds-WP_016503113.1;Parent=gene-D5F94_RS05490;Dbxref=GenBank:WP_016503113.1;Name=WP_016503113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058718.1;locus_tag=D5F94_RS05490;product=amidase;protein_id=WP_016503113.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 187034 187891 . + . ID=gene-D5F94_RS05495;Name=D5F94_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05495;old_locus_tag=D5F94_05495 NZ_QYTD01000005.1 Protein Homology CDS 187034 187891 . + 0 ID=cds-WP_016503112.1;Parent=gene-D5F94_RS05495;Dbxref=GenBank:WP_016503112.1;Name=WP_016503112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751024.1;locus_tag=D5F94_RS05495;product=transporter substrate-binding domain-containing protein;protein_id=WP_016503112.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 187915 188580 . + . ID=gene-D5F94_RS05500;Name=D5F94_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05500;old_locus_tag=D5F94_05500 NZ_QYTD01000005.1 Protein Homology CDS 187915 188580 . + 0 ID=cds-WP_000611501.1;Parent=gene-D5F94_RS05500;Dbxref=GenBank:WP_000611501.1;Name=WP_000611501.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611496.1;locus_tag=D5F94_RS05500;product=amino acid ABC transporter permease;protein_id=WP_000611501.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 188789 189721 . - . ID=gene-D5F94_RS05505;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D5F94_RS05505;old_locus_tag=D5F94_05505 NZ_QYTD01000005.1 Protein Homology CDS 188789 189721 . - 0 ID=cds-WP_016503111.1;Parent=gene-D5F94_RS05505;Dbxref=GenBank:WP_016503111.1;Name=WP_016503111.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503111.1;locus_tag=D5F94_RS05505;product=membrane protein insertase YidC;protein_id=WP_016503111.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 189806 190084 . - . ID=gene-D5F94_RS05510;Name=D5F94_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05510;old_locus_tag=D5F94_05510 NZ_QYTD01000005.1 Protein Homology CDS 189806 190084 . - 0 ID=cds-WP_000755489.1;Parent=gene-D5F94_RS05510;Dbxref=GenBank:WP_000755489.1;Name=WP_000755489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755490.1;locus_tag=D5F94_RS05510;product=acylphosphatase;protein_id=WP_000755489.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 190116 190859 . + . ID=gene-D5F94_RS05515;Name=D5F94_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05515;old_locus_tag=D5F94_05515 NZ_QYTD01000005.1 Protein Homology CDS 190116 190859 . + 0 ID=cds-WP_000207505.1;Parent=gene-D5F94_RS05515;Dbxref=GenBank:WP_000207505.1;Name=WP_000207505.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207503.1;locus_tag=D5F94_RS05515;product=TrmH family RNA methyltransferase;protein_id=WP_000207505.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 190897 191400 . + . ID=gene-D5F94_RS05520;Name=D5F94_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05520;old_locus_tag=D5F94_05520 NZ_QYTD01000005.1 Protein Homology CDS 190897 191400 . + 0 ID=cds-WP_000760496.1;Parent=gene-D5F94_RS05520;Dbxref=GenBank:WP_000760496.1;Name=WP_000760496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003087049.1;locus_tag=D5F94_RS05520;product=HD domain-containing protein;protein_id=WP_000760496.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 191423 192112 . + . ID=gene-D5F94_RS05525;Name=D5F94_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05525;old_locus_tag=D5F94_05525 NZ_QYTD01000005.1 Protein Homology CDS 191423 192112 . + 0 ID=cds-WP_000999457.1;Parent=gene-D5F94_RS05525;Dbxref=GenBank:WP_000999457.1;Name=WP_000999457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632195.1;locus_tag=D5F94_RS05525;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000999457.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 192180 192701 . + . ID=gene-D5F94_RS05530;Name=D5F94_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05530;old_locus_tag=D5F94_05530 NZ_QYTD01000005.1 Protein Homology CDS 192180 192701 . + 0 ID=cds-WP_000647216.1;Parent=gene-D5F94_RS05530;Dbxref=GenBank:WP_000647216.1;Name=WP_000647216.1;Ontology_term=GO:0036094;gbkey=CDS;go_function=small molecule binding|0036094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767843.1;locus_tag=D5F94_RS05530;product=transcription repressor NadR;protein_id=WP_000647216.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 192763 193305 . + . ID=gene-D5F94_RS05535;Name=D5F94_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05535;old_locus_tag=D5F94_05535 NZ_QYTD01000005.1 Protein Homology CDS 192763 193305 . + 0 ID=cds-WP_000039538.1;Parent=gene-D5F94_RS05535;Dbxref=GenBank:WP_000039538.1;Name=WP_000039538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039538.1;locus_tag=D5F94_RS05535;product=hypothetical protein;protein_id=WP_000039538.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 193463 193702 . + . ID=gene-D5F94_RS05540;Name=D5F94_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05540;old_locus_tag=D5F94_05540 NZ_QYTD01000005.1 Protein Homology CDS 193463 193702 . + 0 ID=cds-WP_000108275.1;Parent=gene-D5F94_RS05540;Dbxref=GenBank:WP_000108275.1;Name=WP_000108275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108276.1;locus_tag=D5F94_RS05540;product=YneF family protein;protein_id=WP_000108275.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 193877 194671 . + . ID=gene-D5F94_RS05545;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=D5F94_RS05545;old_locus_tag=D5F94_05545 NZ_QYTD01000005.1 Protein Homology CDS 193877 194671 . + 0 ID=cds-WP_000378351.1;Parent=gene-D5F94_RS05545;Dbxref=GenBank:WP_000378351.1;Name=WP_000378351.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000378350.1;locus_tag=D5F94_RS05545;product=glutamate racemase;protein_id=WP_000378351.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 194668 195642 . + . ID=gene-D5F94_RS05550;Name=D5F94_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05550;old_locus_tag=D5F94_05550 NZ_QYTD01000005.1 Protein Homology CDS 194668 195642 . + 0 ID=cds-WP_000167813.1;Parent=gene-D5F94_RS05550;Dbxref=GenBank:WP_000167813.1;Name=WP_000167813.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768312.1;locus_tag=D5F94_RS05550;product=nucleoside-triphosphate diphosphatase;protein_id=WP_000167813.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 195624 196145 . + . ID=gene-D5F94_RS05555;Name=D5F94_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05555;old_locus_tag=D5F94_05555 NZ_QYTD01000005.1 Protein Homology CDS 195624 196145 . + 0 ID=cds-WP_001007723.1;Parent=gene-D5F94_RS05555;Dbxref=GenBank:WP_001007723.1;Name=WP_001007723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007721.1;locus_tag=D5F94_RS05555;product=metallophosphoesterase;protein_id=WP_001007723.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 196142 196615 . + . ID=gene-D5F94_RS05560;Name=cbpB;gbkey=Gene;gene=cbpB;gene_biotype=protein_coding;locus_tag=D5F94_RS05560;old_locus_tag=D5F94_05560 NZ_QYTD01000005.1 Protein Homology CDS 196142 196615 . + 0 ID=cds-WP_000560708.1;Parent=gene-D5F94_RS05560;Dbxref=GenBank:WP_000560708.1;Name=WP_000560708.1;Ontology_term=GO:0180001;gbkey=CDS;gene=cbpB;go_function=cyclic-di-AMP binding|0180001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560707.1;locus_tag=D5F94_RS05560;product=cyclic-di-AMP-binding protein CbpB;protein_id=WP_000560708.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 196605 197345 . + . ID=gene-D5F94_RS05565;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=D5F94_RS05565;old_locus_tag=D5F94_05565 NZ_QYTD01000005.1 Protein Homology CDS 196605 197345 . + 0 ID=cds-WP_000606413.1;Parent=gene-D5F94_RS05565;Dbxref=GenBank:WP_000606413.1;Name=WP_000606413.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770859.1;locus_tag=D5F94_RS05565;product=site-specific tyrosine recombinase XerD;protein_id=WP_000606413.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 197345 198052 . + . ID=gene-D5F94_RS05570;Name=D5F94_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05570;old_locus_tag=D5F94_05570 NZ_QYTD01000005.1 Protein Homology CDS 197345 198052 . + 0 ID=cds-WP_016503109.1;Parent=gene-D5F94_RS05570;Dbxref=GenBank:WP_016503109.1;Name=WP_016503109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643695.1;locus_tag=D5F94_RS05570;product=segregation/condensation protein A;protein_id=WP_016503109.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 198049 198633 . + . ID=gene-D5F94_RS05575;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=D5F94_RS05575;old_locus_tag=D5F94_05575 NZ_QYTD01000005.1 Protein Homology CDS 198049 198633 . + 0 ID=cds-WP_000221690.1;Parent=gene-D5F94_RS05575;Dbxref=GenBank:WP_000221690.1;Name=WP_000221690.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771433.1;locus_tag=D5F94_RS05575;product=SMC-Scp complex subunit ScpB;protein_id=WP_000221690.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 198623 199345 . + . ID=gene-D5F94_RS05580;Name=D5F94_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05580;old_locus_tag=D5F94_05580 NZ_QYTD01000005.1 Protein Homology CDS 198623 199345 . + 0 ID=cds-WP_016481111.1;Parent=gene-D5F94_RS05580;Dbxref=GenBank:WP_016481111.1;Name=WP_016481111.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934129.1;locus_tag=D5F94_RS05580;product=pseudouridine synthase;protein_id=WP_016481111.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 199345 199596 . + . ID=gene-D5F94_RS05585;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D5F94_RS05585;old_locus_tag=D5F94_05585 NZ_QYTD01000005.1 Protein Homology CDS 199345 199596 . + 0 ID=cds-WP_000920196.1;Parent=gene-D5F94_RS05585;Dbxref=GenBank:WP_000920196.1;Name=WP_000920196.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920199.1;locus_tag=D5F94_RS05585;product=membrane protein insertion efficiency factor YidD;protein_id=WP_000920196.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 199620 201059 . - . ID=gene-D5F94_RS05590;Name=D5F94_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05590;old_locus_tag=D5F94_05590 NZ_QYTD01000005.1 Protein Homology CDS 199620 201059 . - 0 ID=cds-WP_001043412.1;Parent=gene-D5F94_RS05590;Dbxref=GenBank:WP_001043412.1;Name=WP_001043412.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043405.1;locus_tag=D5F94_RS05590;product=TrkH family potassium uptake protein;protein_id=WP_001043412.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 201064 202413 . - . ID=gene-D5F94_RS05595;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=D5F94_RS05595;old_locus_tag=D5F94_05595 NZ_QYTD01000005.1 Protein Homology CDS 201064 202413 . - 0 ID=cds-WP_016503107.1;Parent=gene-D5F94_RS05595;Dbxref=GenBank:WP_016503107.1;Name=WP_016503107.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262566.1;locus_tag=D5F94_RS05595;product=Trk system potassium transporter TrkA;protein_id=WP_016503107.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 202619 203971 . + . ID=gene-D5F94_RS05600;Name=D5F94_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05600;old_locus_tag=D5F94_05600 NZ_QYTD01000005.1 Protein Homology CDS 202619 203971 . + 0 ID=cds-WP_016503106.1;Parent=gene-D5F94_RS05600;Dbxref=GenBank:WP_016503106.1;Name=WP_016503106.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650770.1;locus_tag=D5F94_RS05600;product=APC family permease;protein_id=WP_016503106.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 204144 204692 . + . ID=gene-D5F94_RS05605;Name=D5F94_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05605;old_locus_tag=D5F94_05605 NZ_QYTD01000005.1 Protein Homology CDS 204144 204692 . + 0 ID=cds-WP_001019793.1;Parent=gene-D5F94_RS05605;Dbxref=GenBank:WP_001019793.1;Name=WP_001019793.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001019793.1;locus_tag=D5F94_RS05605;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_001019793.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 204828 205997 . + . ID=gene-D5F94_RS05610;Name=D5F94_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05610;old_locus_tag=D5F94_05610 NZ_QYTD01000005.1 Protein Homology CDS 204828 205997 . + 0 ID=cds-WP_016503105.1;Parent=gene-D5F94_RS05610;Dbxref=GenBank:WP_016503105.1;Name=WP_016503105.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285069.1;locus_tag=D5F94_RS05610;product=MalY/PatB family protein;protein_id=WP_016503105.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 206108 206737 . + . ID=gene-D5F94_RS05615;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=D5F94_RS05615;old_locus_tag=D5F94_05615 NZ_QYTD01000005.1 Protein Homology CDS 206108 206737 . + 0 ID=cds-WP_000514490.1;Parent=gene-D5F94_RS05615;Dbxref=GenBank:WP_000514490.1;Name=WP_000514490.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=D5F94_RS05615;product=uracil phosphoribosyltransferase;protein_id=WP_000514490.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 206862 207452 . + . ID=gene-D5F94_RS05620;Name=D5F94_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05620;old_locus_tag=D5F94_05620 NZ_QYTD01000005.1 Protein Homology CDS 206862 207452 . + 0 ID=cds-WP_000613483.1;Parent=gene-D5F94_RS05620;Dbxref=GenBank:WP_000613483.1;Name=WP_000613483.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262672.1;locus_tag=D5F94_RS05620;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_000613483.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 207552 207797 . + . ID=gene-D5F94_RS05625;Name=D5F94_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05625;old_locus_tag=D5F94_05625 NZ_QYTD01000005.1 Protein Homology CDS 207552 207797 . + 0 ID=cds-WP_001041186.1;Parent=gene-D5F94_RS05625;Dbxref=GenBank:WP_001041186.1;Name=WP_001041186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041185.1;locus_tag=D5F94_RS05625;product=DUF2129 domain-containing protein;protein_id=WP_001041186.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 207952 209118 . + . ID=gene-D5F94_RS05630;Name=D5F94_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05630;old_locus_tag=D5F94_05630 NZ_QYTD01000005.1 Protein Homology CDS 207952 209118 . + 0 ID=cds-WP_016503104.1;Parent=gene-D5F94_RS05630;Dbxref=GenBank:WP_016503104.1;Name=WP_016503104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771624.1;locus_tag=D5F94_RS05630;product=ABC transporter substrate-binding protein;protein_id=WP_016503104.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 209225 210094 . + . ID=gene-D5F94_RS05635;Name=D5F94_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05635;old_locus_tag=D5F94_05635 NZ_QYTD01000005.1 Protein Homology CDS 209225 210094 . + 0 ID=cds-WP_124749447.1;Parent=gene-D5F94_RS05635;Dbxref=GenBank:WP_124749447.1;Name=WP_124749447.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941401.1;locus_tag=D5F94_RS05635;product=branched-chain amino acid ABC transporter permease;protein_id=WP_124749447.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 210097 211050 . + . ID=gene-D5F94_RS05640;Name=D5F94_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05640;old_locus_tag=D5F94_05640 NZ_QYTD01000005.1 Protein Homology CDS 210097 211050 . + 0 ID=cds-WP_016503103.1;Parent=gene-D5F94_RS05640;Dbxref=GenBank:WP_016503103.1;Name=WP_016503103.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662325.1;locus_tag=D5F94_RS05640;product=branched-chain amino acid ABC transporter permease;protein_id=WP_016503103.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 211051 211815 . + . ID=gene-D5F94_RS05645;Name=D5F94_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05645;old_locus_tag=D5F94_05645 NZ_QYTD01000005.1 Protein Homology CDS 211051 211815 . + 0 ID=cds-WP_001185985.1;Parent=gene-D5F94_RS05645;Dbxref=GenBank:WP_001185985.1;Name=WP_001185985.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650814.1;locus_tag=D5F94_RS05645;product=ABC transporter ATP-binding protein;protein_id=WP_001185985.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 211815 212525 . + . ID=gene-D5F94_RS05650;Name=D5F94_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05650;old_locus_tag=D5F94_05650 NZ_QYTD01000005.1 Protein Homology CDS 211815 212525 . + 0 ID=cds-WP_086163456.1;Parent=gene-D5F94_RS05650;Dbxref=GenBank:WP_086163456.1;Name=WP_086163456.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178141.1;locus_tag=D5F94_RS05650;product=ABC transporter ATP-binding protein;protein_id=WP_086163456.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 212544 213203 . + . ID=gene-D5F94_RS05655;Name=D5F94_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05655;old_locus_tag=D5F94_05655 NZ_QYTD01000005.1 Protein Homology CDS 212544 213203 . + 0 ID=cds-WP_001144245.1;Parent=gene-D5F94_RS05655;Dbxref=GenBank:WP_001144245.1;Name=WP_001144245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934124.1;locus_tag=D5F94_RS05655;product=CBS domain-containing protein;protein_id=WP_001144245.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 213294 213929 . + . ID=gene-D5F94_RS05660;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=D5F94_RS05660;old_locus_tag=D5F94_05660 NZ_QYTD01000005.1 Protein Homology CDS 213294 213929 . + 0 ID=cds-WP_016503100.1;Parent=gene-D5F94_RS05660;Dbxref=GenBank:WP_016503100.1;Name=WP_016503100.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715594.1;locus_tag=D5F94_RS05660;product=dTMP kinase;protein_id=WP_016503100.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 213949 214812 . + . ID=gene-D5F94_RS05665;Name=D5F94_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05665;old_locus_tag=D5F94_05665 NZ_QYTD01000005.1 Protein Homology CDS 213949 214812 . + 0 ID=cds-WP_000364568.1;Parent=gene-D5F94_RS05665;Dbxref=GenBank:WP_000364568.1;Name=WP_000364568.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364566.1;locus_tag=D5F94_RS05665;product=DNA polymerase III subunit delta';protein_id=WP_000364568.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 214843 215169 . + . ID=gene-D5F94_RS05670;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=D5F94_RS05670;old_locus_tag=D5F94_05670 NZ_QYTD01000005.1 Protein Homology CDS 214843 215169 . + 0 ID=cds-WP_000358198.1;Parent=gene-D5F94_RS05670;Dbxref=GenBank:WP_000358198.1;Name=WP_000358198.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358198.1;locus_tag=D5F94_RS05670;product=DNA replication initiation control protein YabA;protein_id=WP_000358198.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 215169 216038 . + . ID=gene-D5F94_RS05675;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=D5F94_RS05675;old_locus_tag=D5F94_05675 NZ_QYTD01000005.1 Protein Homology CDS 215169 216038 . + 0 ID=cds-WP_185690645.1;Parent=gene-D5F94_RS05675;Dbxref=GenBank:WP_185690645.1;Name=WP_185690645.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425856.1;locus_tag=D5F94_RS05675;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_185690645.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 216308 216943 . - . ID=gene-D5F94_RS05690;Name=D5F94_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05690;old_locus_tag=D5F94_05690 NZ_QYTD01000005.1 Protein Homology CDS 216308 216943 . - 0 ID=cds-WP_086163454.1;Parent=gene-D5F94_RS05690;Dbxref=GenBank:WP_086163454.1;Name=WP_086163454.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285342.1;locus_tag=D5F94_RS05690;product=copper homeostasis protein CutC;protein_id=WP_086163454.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 217076 218167 . + . ID=gene-D5F94_RS05695;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=D5F94_RS05695;old_locus_tag=D5F94_05695 NZ_QYTD01000005.1 Protein Homology CDS 217076 218167 . + 0 ID=cds-WP_000158395.1;Parent=gene-D5F94_RS05695;Dbxref=GenBank:WP_000158395.1;Name=WP_000158395.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285343.1;locus_tag=D5F94_RS05695;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000158395.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 218235 218783 . + . ID=gene-D5F94_RS05700;Name=D5F94_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05700;old_locus_tag=D5F94_05700 NZ_QYTD01000005.1 Protein Homology CDS 218235 218783 . + 0 ID=cds-WP_001167085.1;Parent=gene-D5F94_RS05700;Dbxref=GenBank:WP_001167085.1;Name=WP_001167085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167084.1;locus_tag=D5F94_RS05700;product=acetyltransferase;protein_id=WP_001167085.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 218845 220026 . + . ID=gene-D5F94_RS05705;Name=D5F94_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05705;old_locus_tag=D5F94_05705 NZ_QYTD01000005.1 Protein Homology CDS 218845 220026 . + 0 ID=cds-WP_000232153.1;Parent=gene-D5F94_RS05705;Dbxref=GenBank:WP_000232153.1;Name=WP_000232153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232149.1;locus_tag=D5F94_RS05705;product=phosphoglycerate dehydrogenase;protein_id=WP_000232153.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 220083 220559 . + . ID=gene-D5F94_RS05710;Name=D5F94_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05710;old_locus_tag=D5F94_05710 NZ_QYTD01000005.1 Protein Homology CDS 220083 220559 . + 0 ID=cds-WP_000966772.1;Parent=gene-D5F94_RS05710;Dbxref=GenBank:WP_000966772.1;Name=WP_000966772.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285345.1;locus_tag=D5F94_RS05710;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000966772.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 220561 220917 . + . ID=gene-D5F94_RS05715;Name=D5F94_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05715;old_locus_tag=D5F94_05715 NZ_QYTD01000005.1 Protein Homology CDS 220561 220917 . + 0 ID=cds-WP_016503093.1;Parent=gene-D5F94_RS05715;Dbxref=GenBank:WP_016503093.1;Name=WP_016503093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287944.1;locus_tag=D5F94_RS05715;product=arsenate reductase family protein;protein_id=WP_016503093.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 220957 221784 . - . ID=gene-D5F94_RS05720;Name=D5F94_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05720;old_locus_tag=D5F94_05720 NZ_QYTD01000005.1 Protein Homology CDS 220957 221784 . - 0 ID=cds-WP_016503092.1;Parent=gene-D5F94_RS05720;Dbxref=GenBank:WP_016503092.1;Name=WP_016503092.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503092.1;locus_tag=D5F94_RS05720;product=exodeoxyribonuclease III;protein_id=WP_016503092.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 221861 222703 . - . ID=gene-D5F94_RS05725;Name=D5F94_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05725;old_locus_tag=D5F94_05725 NZ_QYTD01000005.1 Protein Homology CDS 221861 222703 . - 0 ID=cds-WP_124749451.1;Parent=gene-D5F94_RS05725;Dbxref=GenBank:WP_124749451.1;Name=WP_124749451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735438.1;locus_tag=D5F94_RS05725;product=alpha/beta hydrolase;protein_id=WP_124749451.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 222687 223904 . - . ID=gene-D5F94_RS05730;Name=D5F94_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05730;old_locus_tag=D5F94_05730 NZ_QYTD01000005.1 Protein Homology CDS 222687 223904 . - 0 ID=cds-WP_000556340.1;Parent=gene-D5F94_RS05730;Dbxref=GenBank:WP_000556340.1;Name=WP_000556340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632181.1;locus_tag=D5F94_RS05730;product=PTS sugar transporter subunit IIC;protein_id=WP_000556340.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 224240 224935 . + . ID=gene-D5F94_RS05740;Name=D5F94_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05740;old_locus_tag=D5F94_05740 NZ_QYTD01000005.1 Protein Homology CDS 224240 224935 . + 0 ID=cds-WP_000039372.1;Parent=gene-D5F94_RS05740;Dbxref=GenBank:WP_000039372.1;Name=WP_000039372.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039367.1;locus_tag=D5F94_RS05740;product=YoaK family protein;protein_id=WP_000039372.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 225093 225968 . - . ID=gene-D5F94_RS05745;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=D5F94_RS05745;old_locus_tag=D5F94_05745 NZ_QYTD01000005.1 Protein Homology CDS 225093 225968 . - 0 ID=cds-WP_016503091.1;Parent=gene-D5F94_RS05745;Dbxref=GenBank:WP_016503091.1;Name=WP_016503091.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248370.1;locus_tag=D5F94_RS05745;product=SAM-dependent methyltransferase TehB;protein_id=WP_016503091.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 226111 228108 . + . ID=gene-D5F94_RS05750;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=D5F94_RS05750;old_locus_tag=D5F94_05750 NZ_QYTD01000005.1 Protein Homology CDS 226111 228108 . + 0 ID=cds-WP_016503090.1;Parent=gene-D5F94_RS05750;Dbxref=GenBank:WP_016503090.1;Name=WP_016503090.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058704.1;locus_tag=D5F94_RS05750;product=methionine--tRNA ligase;protein_id=WP_016503090.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 228303 229640 . + . ID=gene-D5F94_RS05755;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D5F94_RS05755;old_locus_tag=D5F94_05755 NZ_QYTD01000005.1 Protein Homology CDS 228303 229640 . + 0 ID=cds-WP_016503089.1;Parent=gene-D5F94_RS05755;Dbxref=GenBank:WP_016503089.1;Name=WP_016503089.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239241.1;locus_tag=D5F94_RS05755;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_016503089.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 230089 230700 . + . ID=gene-D5F94_RS05760;Name=D5F94_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05760;old_locus_tag=D5F94_05760 NZ_QYTD01000005.1 Protein Homology CDS 230089 230700 . + 0 ID=cds-WP_260424802.1;Parent=gene-D5F94_RS05760;Dbxref=GenBank:WP_260424802.1;Name=WP_260424802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767573.1;locus_tag=D5F94_RS05760;product=polyphosphate polymerase domain-containing protein;protein_id=WP_260424802.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 230751 231428 . + . ID=gene-D5F94_RS05765;Name=D5F94_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05765;old_locus_tag=D5F94_05765 NZ_QYTD01000005.1 Protein Homology CDS 230751 231428 . + 0 ID=cds-WP_000654036.1;Parent=gene-D5F94_RS05765;Dbxref=GenBank:WP_000654036.1;Name=WP_000654036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650973.1;locus_tag=D5F94_RS05765;product=DUF4956 domain-containing protein;protein_id=WP_000654036.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 231421 232866 . + . ID=gene-D5F94_RS05770;Name=D5F94_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05770;old_locus_tag=D5F94_05770 NZ_QYTD01000005.1 Protein Homology CDS 231421 232866 . + 0 ID=cds-WP_000533132.1;Parent=gene-D5F94_RS05770;Dbxref=GenBank:WP_000533132.1;Name=WP_000533132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533135.1;locus_tag=D5F94_RS05770;product=CotH kinase family protein;protein_id=WP_000533132.1;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 232873 235032 . + . ID=gene-D5F94_RS05775;Name=D5F94_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05775;old_locus_tag=D5F94_05775 NZ_QYTD01000005.1 Protein Homology CDS 232873 235032 . + 0 ID=cds-WP_124749455.1;Parent=gene-D5F94_RS05775;Dbxref=GenBank:WP_124749455.1;Name=WP_124749455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760424.1;locus_tag=D5F94_RS05775;product=hypothetical protein;protein_id=WP_124749455.1;transl_table=11 NZ_QYTD01000005.1 RefSeq pseudogene 235172 236308 . + . ID=gene-D5F94_RS05780;Name=D5F94_RS05780;end_range=236308,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05780;old_locus_tag=D5F94_05780;partial=true;pseudo=true NZ_QYTD01000005.1 Protein Homology CDS 235172 236308 . + 0 ID=cds-D5F94_RS05780;Parent=gene-D5F94_RS05780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006486,GO:0016757;end_range=236308,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017643060.1;locus_tag=D5F94_RS05780;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_QYTD01000005.1 RefSeq gene 236379 236540 . + . ID=gene-D5F94_RS05785;Name=D5F94_RS05785;end_range=236540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05785;old_locus_tag=D5F94_05785;partial=true NZ_QYTD01000005.1 Protein Homology CDS 236379 236540 . + 0 ID=cds-WP_142997324.1-2;Parent=gene-D5F94_RS05785;Dbxref=GenBank:WP_142997324.1;Name=WP_142997324.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=236540,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS05785;partial=true;product=transposase;protein_id=WP_142997324.1;transl_table=11 ##sequence-region NZ_QYTD01000006.1 1 50782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000006.1 RefSeq region 1 50782 . + . ID=NZ_QYTD01000006.1:1..50782;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000006.1 RefSeq gene 1 178 . + . ID=gene-D5F94_RS05790;Name=D5F94_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05790;old_locus_tag=D5F94_05790;partial=true;start_range=.,1 NZ_QYTD01000006.1 Protein Homology CDS 1 178 . + 1 ID=cds-WP_142997325.1;Parent=gene-D5F94_RS05790;Dbxref=GenBank:WP_142997325.1;Name=WP_142997325.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS05790;partial=true;product=IS3 family transposase;protein_id=WP_142997325.1;start_range=.,1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 236 2887 . - . ID=gene-D5F94_RS05795;Name=D5F94_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05795;old_locus_tag=D5F94_05795 NZ_QYTD01000006.1 Protein Homology CDS 236 2887 . - 0 ID=cds-WP_016502585.1;Parent=gene-D5F94_RS05795;Dbxref=GenBank:WP_016502585.1;Name=WP_016502585.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014623308.1;locus_tag=D5F94_RS05795;product=valine--tRNA ligase;protein_id=WP_016502585.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 2909 3601 . - . ID=gene-D5F94_RS05800;Name=D5F94_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05800;old_locus_tag=D5F94_05800 NZ_QYTD01000006.1 Protein Homology CDS 2909 3601 . - 0 ID=cds-WP_000997618.1;Parent=gene-D5F94_RS05800;Dbxref=GenBank:WP_000997618.1;Name=WP_000997618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648404.1;locus_tag=D5F94_RS05800;product=hypothetical protein;protein_id=WP_000997618.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 3598 4176 . - . ID=gene-D5F94_RS05805;Name=D5F94_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05805;old_locus_tag=D5F94_05805 NZ_QYTD01000006.1 Protein Homology CDS 3598 4176 . - 0 ID=cds-WP_124749462.1;Parent=gene-D5F94_RS05805;Dbxref=GenBank:WP_124749462.1;Name=WP_124749462.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166188.1;locus_tag=D5F94_RS05805;product=GNAT family N-acetyltransferase;protein_id=WP_124749462.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 4445 4756 . - . ID=gene-D5F94_RS05810;Name=D5F94_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05810;old_locus_tag=D5F94_05810 NZ_QYTD01000006.1 Protein Homology CDS 4445 4756 . - 0 ID=cds-WP_016502583.1;Parent=gene-D5F94_RS05810;Dbxref=GenBank:WP_016502583.1;Name=WP_016502583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001119099.1;locus_tag=D5F94_RS05810;product=hypothetical protein;protein_id=WP_016502583.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 4865 5119 . - . ID=gene-D5F94_RS05815;Name=D5F94_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05815;old_locus_tag=D5F94_05815 NZ_QYTD01000006.1 Protein Homology CDS 4865 5119 . - 0 ID=cds-WP_000119699.1;Parent=gene-D5F94_RS05815;Dbxref=GenBank:WP_000119699.1;Name=WP_000119699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771609.1;locus_tag=D5F94_RS05815;product=DUF1912 family protein;protein_id=WP_000119699.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 5310 6311 . - . ID=gene-D5F94_RS05820;Name=D5F94_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05820;old_locus_tag=D5F94_05820 NZ_QYTD01000006.1 Protein Homology CDS 5310 6311 . - 0 ID=cds-WP_016502582.1;Parent=gene-D5F94_RS05820;Dbxref=GenBank:WP_016502582.1;Name=WP_016502582.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648405.1;locus_tag=D5F94_RS05820;product=aldose epimerase family protein;protein_id=WP_016502582.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 6437 7432 . - . ID=gene-D5F94_RS05825;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D5F94_RS05825;old_locus_tag=D5F94_05825 NZ_QYTD01000006.1 Protein Homology CDS 6437 7432 . - 0 ID=cds-WP_016502581.1;Parent=gene-D5F94_RS05825;Dbxref=GenBank:WP_016502581.1;Name=WP_016502581.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996515.1;locus_tag=D5F94_RS05825;product=UDP-glucose 4-epimerase GalE;protein_id=WP_016502581.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 7434 8918 . - . ID=gene-D5F94_RS05830;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=D5F94_RS05830;old_locus_tag=D5F94_05830 NZ_QYTD01000006.1 Protein Homology CDS 7434 8918 . - 0 ID=cds-WP_016502580.1;Parent=gene-D5F94_RS05830;Dbxref=GenBank:WP_016502580.1;Name=WP_016502580.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058395.1;locus_tag=D5F94_RS05830;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_016502580.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 8928 10100 . - . ID=gene-D5F94_RS05835;Name=D5F94_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05835;old_locus_tag=D5F94_05835 NZ_QYTD01000006.1 Protein Homology CDS 8928 10100 . - 0 ID=cds-WP_016502579.1;Parent=gene-D5F94_RS05835;Dbxref=GenBank:WP_016502579.1;Name=WP_016502579.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018369289.1;locus_tag=D5F94_RS05835;product=galactokinase;protein_id=WP_016502579.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 10190 12391 . - . ID=gene-D5F94_RS05840;Name=D5F94_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05840;old_locus_tag=D5F94_05840 NZ_QYTD01000006.1 Protein Homology CDS 10190 12391 . - 0 ID=cds-WP_001122132.1;Parent=gene-D5F94_RS05840;Dbxref=GenBank:WP_001122132.1;Name=WP_001122132.1;Ontology_term=GO:0000272,GO:0004557,GO:0046872,GO:0070403;gbkey=CDS;go_function=alpha-galactosidase activity|0004557||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122135.1;locus_tag=D5F94_RS05840;product=alpha-galactosidase;protein_id=WP_001122132.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 12401 13234 . - . ID=gene-D5F94_RS05845;Name=D5F94_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05845;old_locus_tag=D5F94_05845 NZ_QYTD01000006.1 Protein Homology CDS 12401 13234 . - 0 ID=cds-WP_000278569.1;Parent=gene-D5F94_RS05845;Dbxref=GenBank:WP_000278569.1;Name=WP_000278569.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278569.1;locus_tag=D5F94_RS05845;product=carbohydrate ABC transporter permease;protein_id=WP_000278569.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 13247 14137 . - . ID=gene-D5F94_RS05850;Name=D5F94_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05850;old_locus_tag=D5F94_05850 NZ_QYTD01000006.1 Protein Homology CDS 13247 14137 . - 0 ID=cds-WP_000791281.1;Parent=gene-D5F94_RS05850;Dbxref=GenBank:WP_000791281.1;Name=WP_000791281.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648409.1;locus_tag=D5F94_RS05850;product=carbohydrate ABC transporter permease;protein_id=WP_000791281.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 14221 15498 . - . ID=gene-D5F94_RS05855;Name=D5F94_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05855;old_locus_tag=D5F94_05855 NZ_QYTD01000006.1 Protein Homology CDS 14221 15498 . - 0 ID=cds-WP_016502578.1;Parent=gene-D5F94_RS05855;Dbxref=GenBank:WP_016502578.1;Name=WP_016502578.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738089.1;locus_tag=D5F94_RS05855;product=ABC transporter substrate-binding protein;protein_id=WP_016502578.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 15737 16567 . + . ID=gene-D5F94_RS05860;Name=D5F94_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05860;old_locus_tag=D5F94_05860 NZ_QYTD01000006.1 Protein Homology CDS 15737 16567 . + 0 ID=cds-WP_001015729.1;Parent=gene-D5F94_RS05860;Dbxref=GenBank:WP_001015729.1;Name=WP_001015729.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015730.1;locus_tag=D5F94_RS05860;product=AraC family transcriptional regulator;protein_id=WP_001015729.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 16852 17136 . - . ID=gene-D5F94_RS05865;Name=D5F94_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05865;old_locus_tag=D5F94_05865 NZ_QYTD01000006.1 Protein Homology CDS 16852 17136 . - 0 ID=cds-WP_000734774.1;Parent=gene-D5F94_RS05865;Dbxref=GenBank:WP_000734774.1;Name=WP_000734774.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734775.1;locus_tag=D5F94_RS05865;product=PTS sugar transporter subunit IIB;protein_id=WP_000734774.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 17138 18469 . - . ID=gene-D5F94_RS05870;Name=D5F94_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05870;old_locus_tag=D5F94_05870 NZ_QYTD01000006.1 Protein Homology CDS 17138 18469 . - 0 ID=cds-WP_016502577.1;Parent=gene-D5F94_RS05870;Dbxref=GenBank:WP_016502577.1;Name=WP_016502577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884276.1;locus_tag=D5F94_RS05870;product=PTS galactitol transporter subunit IIC;protein_id=WP_016502577.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 18482 18946 . - . ID=gene-D5F94_RS05875;Name=D5F94_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05875;old_locus_tag=D5F94_05875 NZ_QYTD01000006.1 Protein Homology CDS 18482 18946 . - 0 ID=cds-WP_016480380.1;Parent=gene-D5F94_RS05875;Dbxref=GenBank:WP_016480380.1;Name=WP_016480380.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000888633.1;locus_tag=D5F94_RS05875;product=PTS sugar transporter subunit IIA;protein_id=WP_016480380.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 19081 19911 . - . ID=gene-D5F94_RS05880;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=D5F94_RS05880;old_locus_tag=D5F94_05880 NZ_QYTD01000006.1 Protein Homology CDS 19081 19911 . - 0 ID=cds-WP_000221976.1;Parent=gene-D5F94_RS05880;Dbxref=GenBank:WP_000221976.1;Name=WP_000221976.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631792.1;locus_tag=D5F94_RS05880;product=rhamnulose-1-phosphate aldolase;protein_id=WP_000221976.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 19934 21271 . - . ID=gene-D5F94_RS05885;Name=D5F94_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05885;old_locus_tag=D5F94_05885 NZ_QYTD01000006.1 Protein Homology CDS 19934 21271 . - 0 ID=cds-WP_016502576.1;Parent=gene-D5F94_RS05885;Dbxref=GenBank:WP_016502576.1;Name=WP_016502576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648410.1;locus_tag=D5F94_RS05885;product=PTS galactitol transporter subunit IIC;protein_id=WP_016502576.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 21283 21561 . - . ID=gene-D5F94_RS05890;Name=D5F94_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05890;old_locus_tag=D5F94_05890 NZ_QYTD01000006.1 Protein Homology CDS 21283 21561 . - 0 ID=cds-WP_000734006.1;Parent=gene-D5F94_RS05890;Dbxref=GenBank:WP_000734006.1;Name=WP_000734006.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734008.1;locus_tag=D5F94_RS05890;product=PTS sugar transporter subunit IIB;protein_id=WP_000734006.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 21580 22029 . - . ID=gene-D5F94_RS05895;Name=D5F94_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05895;old_locus_tag=D5F94_05895 NZ_QYTD01000006.1 Protein Homology CDS 21580 22029 . - 0 ID=cds-WP_041165653.1;Parent=gene-D5F94_RS05895;Dbxref=GenBank:WP_041165653.1;Name=WP_041165653.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570642.1;locus_tag=D5F94_RS05895;product=PTS sugar transporter subunit IIA;protein_id=WP_041165653.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 22144 24213 . - . ID=gene-D5F94_RS05900;Name=D5F94_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05900;old_locus_tag=D5F94_05900 NZ_QYTD01000006.1 Protein Homology CDS 22144 24213 . - 0 ID=cds-WP_257638779.1;Parent=gene-D5F94_RS05900;Dbxref=GenBank:WP_257638779.1;Name=WP_257638779.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042758.1;locus_tag=D5F94_RS05900;product=BglG family transcription antiterminator;protein_id=WP_257638779.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 24413 25168 . + . ID=gene-D5F94_RS05905;Name=D5F94_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05905;old_locus_tag=D5F94_05905 NZ_QYTD01000006.1 Protein Homology CDS 24413 25168 . + 0 ID=cds-WP_124749464.1;Parent=gene-D5F94_RS05905;Dbxref=GenBank:WP_124749464.1;Name=WP_124749464.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018433.1;locus_tag=D5F94_RS05905;product=class I SAM-dependent methyltransferase;protein_id=WP_124749464.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 25189 25527 . + . ID=gene-D5F94_RS05910;Name=D5F94_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05910;old_locus_tag=D5F94_05910 NZ_QYTD01000006.1 Protein Homology CDS 25189 25527 . + 0 ID=cds-WP_000120348.1;Parent=gene-D5F94_RS05910;Dbxref=GenBank:WP_000120348.1;Name=WP_000120348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120348.1;locus_tag=D5F94_RS05910;product=cupin domain-containing protein;protein_id=WP_000120348.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 25529 25834 . + . ID=gene-D5F94_RS05915;Name=D5F94_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05915;old_locus_tag=D5F94_05915 NZ_QYTD01000006.1 Protein Homology CDS 25529 25834 . + 0 ID=cds-WP_000484318.1;Parent=gene-D5F94_RS05915;Dbxref=GenBank:WP_000484318.1;Name=WP_000484318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484319.1;locus_tag=D5F94_RS05915;product=hypothetical protein;protein_id=WP_000484318.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 25906 25976 . + . ID=gene-D5F94_RS05920;Name=D5F94_RS05920;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS05920;old_locus_tag=D5F94_05920 NZ_QYTD01000006.1 tRNAscan-SE tRNA 25906 25976 . + . ID=rna-D5F94_RS05920;Parent=gene-D5F94_RS05920;anticodon=(pos:25938..25940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS05920;product=tRNA-Thr NZ_QYTD01000006.1 tRNAscan-SE exon 25906 25976 . + . ID=exon-D5F94_RS05920-1;Parent=rna-D5F94_RS05920;anticodon=(pos:25938..25940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS05920;product=tRNA-Thr NZ_QYTD01000006.1 RefSeq gene 26077 26298 . - . ID=gene-D5F94_RS05925;Name=D5F94_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05925;old_locus_tag=D5F94_05925 NZ_QYTD01000006.1 Protein Homology CDS 26077 26298 . - 0 ID=cds-WP_016502572.1;Parent=gene-D5F94_RS05925;Dbxref=GenBank:WP_016502572.1;Name=WP_016502572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186893.1;locus_tag=D5F94_RS05925;product=hypothetical protein;protein_id=WP_016502572.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 26989 27513 . - . ID=gene-D5F94_RS05935;Name=D5F94_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05935;old_locus_tag=D5F94_05935 NZ_QYTD01000006.1 Protein Homology CDS 26989 27513 . - 0 ID=cds-WP_016502571.1;Parent=gene-D5F94_RS05935;Dbxref=GenBank:WP_016502571.1;Name=WP_016502571.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237805.1;locus_tag=D5F94_RS05935;product=TetR/AcrR family transcriptional regulator;protein_id=WP_016502571.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 27645 28508 . + . ID=gene-D5F94_RS05940;Name=D5F94_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05940;old_locus_tag=D5F94_05940 NZ_QYTD01000006.1 Protein Homology CDS 27645 28508 . + 0 ID=cds-WP_124749466.1;Parent=gene-D5F94_RS05940;Dbxref=GenBank:WP_124749466.1;Name=WP_124749466.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203281.1;locus_tag=D5F94_RS05940;product=cation diffusion facilitator family transporter;protein_id=WP_124749466.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 28593 29447 . + . ID=gene-D5F94_RS05945;Name=D5F94_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05945;old_locus_tag=D5F94_05945 NZ_QYTD01000006.1 Protein Homology CDS 28593 29447 . + 0 ID=cds-WP_016502569.1;Parent=gene-D5F94_RS05945;Dbxref=GenBank:WP_016502569.1;Name=WP_016502569.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631788.1;locus_tag=D5F94_RS05945;product=aldo/keto reductase;protein_id=WP_016502569.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 29557 30594 . + . ID=gene-D5F94_RS05950;Name=D5F94_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05950;old_locus_tag=D5F94_05950 NZ_QYTD01000006.1 Protein Homology CDS 29557 30594 . + 0 ID=cds-WP_016502568.1;Parent=gene-D5F94_RS05950;Dbxref=GenBank:WP_016502568.1;Name=WP_016502568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861552.1;locus_tag=D5F94_RS05950;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_016502568.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 30610 30999 . + . ID=gene-D5F94_RS05955;Name=nmlR;gbkey=Gene;gene=nmlR;gene_biotype=protein_coding;locus_tag=D5F94_RS05955;old_locus_tag=D5F94_05955 NZ_QYTD01000006.1 Protein Homology CDS 30610 30999 . + 0 ID=cds-WP_000547676.1;Parent=gene-D5F94_RS05955;Dbxref=GenBank:WP_000547676.1;Name=WP_000547676.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nmlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547677.1;locus_tag=D5F94_RS05955;product=stress response transcriptional regulator NmlR;protein_id=WP_000547676.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 31009 31404 . + . ID=gene-D5F94_RS05960;Name=D5F94_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05960;old_locus_tag=D5F94_05960 NZ_QYTD01000006.1 Protein Homology CDS 31009 31404 . + 0 ID=cds-WP_016502567.1;Parent=gene-D5F94_RS05960;Dbxref=GenBank:WP_016502567.1;Name=WP_016502567.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158469.1;locus_tag=D5F94_RS05960;product=cupin domain-containing protein;protein_id=WP_016502567.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 31428 31745 . + . ID=gene-D5F94_RS05965;Name=D5F94_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05965;old_locus_tag=D5F94_05965 NZ_QYTD01000006.1 Protein Homology CDS 31428 31745 . + 0 ID=cds-WP_000660666.1;Parent=gene-D5F94_RS05965;Dbxref=GenBank:WP_000660666.1;Name=WP_000660666.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660666.1;locus_tag=D5F94_RS05965;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000660666.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 31832 32116 . + . ID=gene-D5F94_RS05970;Name=D5F94_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05970;old_locus_tag=D5F94_05970 NZ_QYTD01000006.1 Protein Homology CDS 31832 32116 . + 0 ID=cds-WP_000955821.1;Parent=gene-D5F94_RS05970;Dbxref=GenBank:WP_000955821.1;Name=WP_000955821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000955821.1;locus_tag=D5F94_RS05970;product=DUF2316 family protein;protein_id=WP_000955821.1;transl_table=11 NZ_QYTD01000006.1 RefSeq pseudogene 32354 32845 . + . ID=gene-D5F94_RS05975;Name=D5F94_RS05975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS05975;old_locus_tag=D5F94_05975;pseudo=true NZ_QYTD01000006.1 Protein Homology CDS 32354 32845 . + 0 ID=cds-D5F94_RS05975;Parent=gene-D5F94_RS05975;Note=internal stop;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648418.1;locus_tag=D5F94_RS05975;product=GyrI-like domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 32889 33278 . - . ID=gene-D5F94_RS05980;Name=D5F94_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS05980;old_locus_tag=D5F94_05980 NZ_QYTD01000006.1 Protein Homology CDS 32889 33278 . - 0 ID=cds-WP_000632621.1;Parent=gene-D5F94_RS05980;Dbxref=GenBank:WP_000632621.1;Name=WP_000632621.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632624.1;locus_tag=D5F94_RS05980;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000632621.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 33291 36458 . - . ID=gene-D5F94_RS05985;Name=hupY;gbkey=Gene;gene=hupY;gene_biotype=protein_coding;gene_synonym=lrrG;locus_tag=D5F94_RS05985;old_locus_tag=D5F94_05985 NZ_QYTD01000006.1 Protein Homology CDS 33291 36458 . - 0 ID=cds-WP_016502565.1;Parent=gene-D5F94_RS05985;Dbxref=GenBank:WP_016502565.1;Name=WP_016502565.1;gbkey=CDS;gene=hupY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162177.1;locus_tag=D5F94_RS05985;product=leucine-rich repeat adhesin HupY/LrrG;protein_id=WP_016502565.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 36521 38689 . - . ID=gene-D5F94_RS05990;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D5F94_RS05990;old_locus_tag=D5F94_05990 NZ_QYTD01000006.1 Protein Homology CDS 36521 38689 . - 0 ID=cds-WP_000194376.1;Parent=gene-D5F94_RS05990;Dbxref=GenBank:WP_000194376.1;Name=WP_000194376.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058380.1;locus_tag=D5F94_RS05990;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000194376.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 38691 39104 . - . ID=gene-D5F94_RS05995;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D5F94_RS05995;old_locus_tag=D5F94_05995 NZ_QYTD01000006.1 Protein Homology CDS 38691 39104 . - 0 ID=cds-WP_000378632.1;Parent=gene-D5F94_RS05995;Dbxref=GenBank:WP_000378632.1;Name=WP_000378632.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767518.1;locus_tag=D5F94_RS05995;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000378632.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 39105 40115 . - . ID=gene-D5F94_RS06000;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D5F94_RS06000;old_locus_tag=D5F94_06000 NZ_QYTD01000006.1 Protein Homology CDS 39105 40115 . - 0 ID=cds-WP_001192437.1;Parent=gene-D5F94_RS06000;Dbxref=GenBank:WP_001192437.1;Name=WP_001192437.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192438.1;locus_tag=D5F94_RS06000;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_001192437.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 40670 41578 . - . ID=gene-D5F94_RS06005;Name=D5F94_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06005;old_locus_tag=D5F94_06005 NZ_QYTD01000006.1 Protein Homology CDS 40670 41578 . - 0 ID=cds-WP_000848920.1;Parent=gene-D5F94_RS06005;Dbxref=GenBank:WP_000848920.1;Name=WP_000848920.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848915.1;locus_tag=D5F94_RS06005;product=glycosyltransferase family 2 protein;protein_id=WP_000848920.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 41788 45489 . - . ID=gene-D5F94_RS06010;Name=D5F94_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06010;old_locus_tag=D5F94_06010 NZ_QYTD01000006.1 Protein Homology CDS 41788 45489 . - 0 ID=cds-WP_124749468.1;Parent=gene-D5F94_RS06010;Dbxref=GenBank:WP_124749468.1;Name=WP_124749468.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646417.1;locus_tag=D5F94_RS06010;product=S8 family serine peptidase;protein_id=WP_124749468.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 45678 46106 . - . ID=gene-D5F94_RS06015;Name=D5F94_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06015;old_locus_tag=D5F94_06015 NZ_QYTD01000006.1 Protein Homology CDS 45678 46106 . - 0 ID=cds-WP_017647004.1;Parent=gene-D5F94_RS06015;Dbxref=GenBank:WP_017647004.1;Name=WP_017647004.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768361.1;locus_tag=D5F94_RS06015;product=GNAT family N-acetyltransferase;protein_id=WP_017647004.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 46140 46904 . - . ID=gene-D5F94_RS06020;Name=D5F94_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06020;old_locus_tag=D5F94_06020 NZ_QYTD01000006.1 Protein Homology CDS 46140 46904 . - 0 ID=cds-WP_000586351.1;Parent=gene-D5F94_RS06020;Dbxref=GenBank:WP_000586351.1;Name=WP_000586351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771410.1;locus_tag=D5F94_RS06020;product=nucleoside phosphorylase;protein_id=WP_000586351.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 47173 48528 . - . ID=gene-D5F94_RS06025;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=D5F94_RS06025;old_locus_tag=D5F94_06025 NZ_QYTD01000006.1 Protein Homology CDS 47173 48528 . - 0 ID=cds-WP_016502559.1;Parent=gene-D5F94_RS06025;Dbxref=GenBank:WP_016502559.1;Name=WP_016502559.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284934.1;locus_tag=D5F94_RS06025;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_016502559.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 48627 49403 . + . ID=gene-D5F94_RS06030;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=D5F94_RS06030;old_locus_tag=D5F94_06030 NZ_QYTD01000006.1 Protein Homology CDS 48627 49403 . + 0 ID=cds-WP_000704975.1;Parent=gene-D5F94_RS06030;Dbxref=GenBank:WP_000704975.1;Name=WP_000704975.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704976.1;locus_tag=D5F94_RS06030;product=recombination regulator RecX;protein_id=WP_000704975.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 49487 50020 . + . ID=gene-D5F94_RS06035;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=D5F94_RS06035;old_locus_tag=D5F94_06035 NZ_QYTD01000006.1 Protein Homology CDS 49487 50020 . + 0 ID=cds-WP_001239184.1;Parent=gene-D5F94_RS06035;Dbxref=GenBank:WP_001239184.1;Name=WP_001239184.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949762.1;locus_tag=D5F94_RS06035;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_001239184.1;transl_table=11 NZ_QYTD01000006.1 RefSeq gene 50135 50206 . - . ID=gene-D5F94_RS06040;Name=D5F94_RS06040;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS06040;old_locus_tag=D5F94_06040 NZ_QYTD01000006.1 tRNAscan-SE tRNA 50135 50206 . - . ID=rna-D5F94_RS06040;Parent=gene-D5F94_RS06040;anticodon=(pos:complement(50171..50173));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06040;product=tRNA-Glu NZ_QYTD01000006.1 tRNAscan-SE exon 50135 50206 . - . ID=exon-D5F94_RS06040-1;Parent=rna-D5F94_RS06040;anticodon=(pos:complement(50171..50173));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06040;product=tRNA-Glu NZ_QYTD01000006.1 RefSeq gene 50217 50290 . - . ID=gene-D5F94_RS06045;Name=D5F94_RS06045;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS06045;old_locus_tag=D5F94_06045 NZ_QYTD01000006.1 tRNAscan-SE tRNA 50217 50290 . - . ID=rna-D5F94_RS06045;Parent=gene-D5F94_RS06045;anticodon=(pos:complement(50254..50256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06045;product=tRNA-Ile NZ_QYTD01000006.1 tRNAscan-SE exon 50217 50290 . - . ID=exon-D5F94_RS06045-1;Parent=rna-D5F94_RS06045;anticodon=(pos:complement(50254..50256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06045;product=tRNA-Ile NZ_QYTD01000006.1 RefSeq gene 50327 50397 . - . ID=gene-D5F94_RS06050;Name=D5F94_RS06050;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS06050;old_locus_tag=D5F94_06050 NZ_QYTD01000006.1 tRNAscan-SE tRNA 50327 50397 . - . ID=rna-D5F94_RS06050;Parent=gene-D5F94_RS06050;anticodon=(pos:complement(50363..50365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06050;product=tRNA-Gly NZ_QYTD01000006.1 tRNAscan-SE exon 50327 50397 . - . ID=exon-D5F94_RS06050-1;Parent=rna-D5F94_RS06050;anticodon=(pos:complement(50363..50365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06050;product=tRNA-Gly NZ_QYTD01000006.1 RefSeq gene 50403 50475 . - . ID=gene-D5F94_RS06055;Name=D5F94_RS06055;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS06055;old_locus_tag=D5F94_06055 NZ_QYTD01000006.1 tRNAscan-SE tRNA 50403 50475 . - . ID=rna-D5F94_RS06055;Parent=gene-D5F94_RS06055;anticodon=(pos:complement(50440..50442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06055;product=tRNA-Val NZ_QYTD01000006.1 tRNAscan-SE exon 50403 50475 . - . ID=exon-D5F94_RS06055-1;Parent=rna-D5F94_RS06055;anticodon=(pos:complement(50440..50442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06055;product=tRNA-Val NZ_QYTD01000006.1 RefSeq gene 50479 50594 . - . ID=gene-D5F94_RS06060;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D5F94_RS06060;old_locus_tag=D5F94_06060 NZ_QYTD01000006.1 cmsearch rRNA 50479 50594 . - . ID=rna-D5F94_RS06060;Parent=gene-D5F94_RS06060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS06060;product=5S ribosomal RNA NZ_QYTD01000006.1 cmsearch exon 50479 50594 . - . ID=exon-D5F94_RS06060-1;Parent=rna-D5F94_RS06060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS06060;product=5S ribosomal RNA NZ_QYTD01000006.1 RefSeq gene 50669 50782 . - . ID=gene-D5F94_RS06065;Name=D5F94_RS06065;end_range=50782,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D5F94_RS06065;old_locus_tag=D5F94_06065;partial=true NZ_QYTD01000006.1 cmsearch rRNA 50669 50782 . - . ID=rna-D5F94_RS06065;Parent=gene-D5F94_RS06065;Dbxref=RFAM:RF02541;end_range=50782,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS06065;partial=true;product=23S ribosomal RNA NZ_QYTD01000006.1 cmsearch exon 50669 50782 . - . ID=exon-D5F94_RS06065-1;Parent=rna-D5F94_RS06065;Dbxref=RFAM:RF02541;end_range=50782,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=D5F94_RS06065;partial=true;product=23S ribosomal RNA ##sequence-region NZ_QYTD01000007.1 1 36770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000007.1 RefSeq region 1 36770 . + . ID=NZ_QYTD01000007.1:1..36770;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000007.1 RefSeq pseudogene 123 1742 . + . ID=gene-D5F94_RS06070;Name=hylB;gbkey=Gene;gene=hylB;gene_biotype=pseudogene;locus_tag=D5F94_RS06070;old_locus_tag=D5F94_06070;partial=true;pseudo=true;start_range=.,123 NZ_QYTD01000007.1 Protein Homology CDS 123 1742 . + 0 ID=cds-D5F94_RS06070;Parent=gene-D5F94_RS06070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=hylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_192884539.1;locus_tag=D5F94_RS06070;partial=true;product=hyaluronate lyase;pseudo=true;start_range=.,123;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 1794 2840 . - . ID=gene-D5F94_RS06075;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=D5F94_RS06075;old_locus_tag=D5F94_06075 NZ_QYTD01000007.1 Protein Homology CDS 1794 2840 . - 0 ID=cds-WP_016502954.1;Parent=gene-D5F94_RS06075;Dbxref=GenBank:WP_016502954.1;Name=WP_016502954.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134275.1;locus_tag=D5F94_RS06075;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_016502954.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 3047 3640 . - . ID=gene-D5F94_RS06080;Name=D5F94_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06080;old_locus_tag=D5F94_06080 NZ_QYTD01000007.1 Protein Homology CDS 3047 3640 . - 0 ID=cds-WP_000139156.1;Parent=gene-D5F94_RS06080;Dbxref=GenBank:WP_000139156.1;Name=WP_000139156.1;Ontology_term=GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018379055.1;locus_tag=D5F94_RS06080;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=WP_000139156.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 3640 4509 . - . ID=gene-D5F94_RS06085;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=D5F94_RS06085;old_locus_tag=D5F94_06085 NZ_QYTD01000007.1 Protein Homology CDS 3640 4509 . - 0 ID=cds-WP_000676112.1;Parent=gene-D5F94_RS06085;Dbxref=GenBank:WP_000676112.1;Name=WP_000676112.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276675.1;locus_tag=D5F94_RS06085;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676112.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 4569 5672 . - . ID=gene-D5F94_RS06090;Name=D5F94_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06090;old_locus_tag=D5F94_06090 NZ_QYTD01000007.1 Protein Homology CDS 4569 5672 . - 0 ID=cds-WP_000716833.1;Parent=gene-D5F94_RS06090;Dbxref=GenBank:WP_000716833.1;Name=WP_000716833.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058604.1;locus_tag=D5F94_RS06090;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000716833.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 5681 6469 . - . ID=gene-D5F94_RS06095;Name=D5F94_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06095;old_locus_tag=D5F94_06095 NZ_QYTD01000007.1 Protein Homology CDS 5681 6469 . - 0 ID=cds-WP_000647415.1;Parent=gene-D5F94_RS06095;Dbxref=GenBank:WP_000647415.1;Name=WP_000647415.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058605.1;locus_tag=D5F94_RS06095;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_000647415.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 6459 7142 . - . ID=gene-D5F94_RS06100;Name=D5F94_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06100;old_locus_tag=D5F94_06100 NZ_QYTD01000007.1 Protein Homology CDS 6459 7142 . - 0 ID=cds-WP_000365677.1;Parent=gene-D5F94_RS06100;Dbxref=GenBank:WP_000365677.1;Name=WP_000365677.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365681.1;locus_tag=D5F94_RS06100;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_000365677.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 7246 7926 . - . ID=gene-D5F94_RS06105;Name=D5F94_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06105;old_locus_tag=D5F94_06105 NZ_QYTD01000007.1 Protein Homology CDS 7246 7926 . - 0 ID=cds-WP_000221657.1;Parent=gene-D5F94_RS06105;Dbxref=GenBank:WP_000221657.1;Name=WP_000221657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221657.1;locus_tag=D5F94_RS06105;product=DnaD domain-containing protein;protein_id=WP_000221657.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 8044 8562 . - . ID=gene-D5F94_RS06110;Name=D5F94_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06110;old_locus_tag=D5F94_06110 NZ_QYTD01000007.1 Protein Homology CDS 8044 8562 . - 0 ID=cds-WP_000365343.1;Parent=gene-D5F94_RS06110;Dbxref=GenBank:WP_000365343.1;Name=WP_000365343.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294327.1;locus_tag=D5F94_RS06110;product=adenine phosphoribosyltransferase;protein_id=WP_000365343.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 8685 11249 . - . ID=gene-D5F94_RS06115;Name=D5F94_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06115;old_locus_tag=D5F94_06115 NZ_QYTD01000007.1 Protein Homology CDS 8685 11249 . - 0 ID=cds-WP_016502955.1;Parent=gene-D5F94_RS06115;Dbxref=GenBank:WP_016502955.1;Name=WP_016502955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650575.1;locus_tag=D5F94_RS06115;product=GBS Bsp-like repeat-containing protein;protein_id=WP_016502955.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 11401 13599 . - . ID=gene-D5F94_RS06125;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=D5F94_RS06125;old_locus_tag=D5F94_06125 NZ_QYTD01000007.1 Protein Homology CDS 11401 13599 . - 0 ID=cds-WP_000622234.1;Parent=gene-D5F94_RS06125;Dbxref=GenBank:WP_000622234.1;Name=WP_000622234.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622225.1;locus_tag=D5F94_RS06125;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000622234.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 13596 14357 . - . ID=gene-D5F94_RS06130;Name=D5F94_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06130;old_locus_tag=D5F94_06130 NZ_QYTD01000007.1 Protein Homology CDS 13596 14357 . - 0 ID=cds-WP_000124580.1;Parent=gene-D5F94_RS06130;Dbxref=GenBank:WP_000124580.1;Name=WP_000124580.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771878.1;locus_tag=D5F94_RS06130;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000124580.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 14359 15288 . - . ID=gene-D5F94_RS06135;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=D5F94_RS06135;old_locus_tag=D5F94_06135 NZ_QYTD01000007.1 Protein Homology CDS 14359 15288 . - 0 ID=cds-WP_000405388.1;Parent=gene-D5F94_RS06135;Dbxref=GenBank:WP_000405388.1;Name=WP_000405388.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405389.1;locus_tag=D5F94_RS06135;product=ribonuclease Z;protein_id=WP_000405388.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 15330 15977 . - . ID=gene-D5F94_RS06140;Name=D5F94_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06140;old_locus_tag=D5F94_06140 NZ_QYTD01000007.1 Protein Homology CDS 15330 15977 . - 0 ID=cds-WP_016502956.1;Parent=gene-D5F94_RS06140;Dbxref=GenBank:WP_016502956.1;Name=WP_016502956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568323.1;locus_tag=D5F94_RS06140;product=cystathionine beta-lyase;protein_id=WP_016502956.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 15970 17208 . - . ID=gene-D5F94_RS06145;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=D5F94_RS06145;old_locus_tag=D5F94_06145 NZ_QYTD01000007.1 Protein Homology CDS 15970 17208 . - 0 ID=cds-WP_000573351.1;Parent=gene-D5F94_RS06145;Dbxref=GenBank:WP_000573351.1;Name=WP_000573351.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573352.1;locus_tag=D5F94_RS06145;product=GTPase HflX;protein_id=WP_000573351.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 17299 18189 . - . ID=gene-D5F94_RS06150;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=D5F94_RS06150;old_locus_tag=D5F94_06150 NZ_QYTD01000007.1 Protein Homology CDS 17299 18189 . - 0 ID=cds-WP_001226485.1;Parent=gene-D5F94_RS06150;Dbxref=GenBank:WP_001226485.1;Name=WP_001226485.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226479.1;locus_tag=D5F94_RS06150;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001226485.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 18300 18476 . + . ID=gene-D5F94_RS06155;Name=D5F94_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06155;old_locus_tag=D5F94_06155 NZ_QYTD01000007.1 Protein Homology CDS 18300 18476 . + 0 ID=cds-WP_000239229.1;Parent=gene-D5F94_RS06155;Dbxref=GenBank:WP_000239229.1;Name=WP_000239229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239229.1;locus_tag=D5F94_RS06155;product=DUF3042 family protein;protein_id=WP_000239229.1;transl_table=11 NZ_QYTD01000007.1 RefSeq pseudogene 18518 19436 . - . ID=gene-D5F94_RS06160;Name=D5F94_RS06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06160;old_locus_tag=D5F94_06160;pseudo=true NZ_QYTD01000007.1 Protein Homology CDS 18518 19436 . - 0 ID=cds-D5F94_RS06160;Parent=gene-D5F94_RS06160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800355.1;locus_tag=D5F94_RS06160;product=TDT family transporter;pseudo=true;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 19571 23329 . - . ID=gene-D5F94_RS06165;Name=D5F94_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06165;old_locus_tag=D5F94_06165 NZ_QYTD01000007.1 Protein Homology CDS 19571 23329 . - 0 ID=cds-WP_124749008.1;Parent=gene-D5F94_RS06165;Dbxref=GenBank:WP_124749008.1;Name=WP_124749008.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823026.1;locus_tag=D5F94_RS06165;product=pullulanase;protein_id=WP_124749008.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 23498 24232 . - . ID=gene-D5F94_RS06170;Name=D5F94_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06170;old_locus_tag=D5F94_06170 NZ_QYTD01000007.1 Protein Homology CDS 23498 24232 . - 0 ID=cds-WP_001205488.1;Parent=gene-D5F94_RS06170;Dbxref=GenBank:WP_001205488.1;Name=WP_001205488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650202.1;locus_tag=D5F94_RS06170;product=PHP domain-containing protein;protein_id=WP_001205488.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 24247 24831 . - . ID=gene-D5F94_RS06175;Name=D5F94_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06175;old_locus_tag=D5F94_06175 NZ_QYTD01000007.1 Protein Homology CDS 24247 24831 . - 0 ID=cds-WP_016480876.1;Parent=gene-D5F94_RS06175;Dbxref=GenBank:WP_016480876.1;Name=WP_016480876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130595.1;locus_tag=D5F94_RS06175;product=uracil-DNA glycosylase family protein;protein_id=WP_016480876.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 24928 26334 . - . ID=gene-D5F94_RS06180;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=D5F94_RS06180;old_locus_tag=D5F94_06180 NZ_QYTD01000007.1 Protein Homology CDS 24928 26334 . - 0 ID=cds-WP_000150954.1;Parent=gene-D5F94_RS06180;Dbxref=GenBank:WP_000150954.1;Name=WP_000150954.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pepV;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645438.1;locus_tag=D5F94_RS06180;product=dipeptidase PepV;protein_id=WP_000150954.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 26381 26983 . - . ID=gene-D5F94_RS06185;Name=D5F94_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06185;old_locus_tag=D5F94_06185 NZ_QYTD01000007.1 Protein Homology CDS 26381 26983 . - 0 ID=cds-WP_016480878.1;Parent=gene-D5F94_RS06185;Dbxref=GenBank:WP_016480878.1;Name=WP_016480878.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184478.1;locus_tag=D5F94_RS06185;product=nitroreductase family protein;protein_id=WP_016480878.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 27153 28934 . + . ID=gene-D5F94_RS06190;Name=D5F94_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06190;old_locus_tag=D5F94_06190 NZ_QYTD01000007.1 Protein Homology CDS 27153 28934 . + 0 ID=cds-WP_016480879.1;Parent=gene-D5F94_RS06190;Dbxref=GenBank:WP_016480879.1;Name=WP_016480879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480879.1;locus_tag=D5F94_RS06190;product=glycerophosphodiester phosphodiesterase;protein_id=WP_016480879.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 28976 30757 . - . ID=gene-D5F94_RS06195;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=D5F94_RS06195;old_locus_tag=D5F94_06195 NZ_QYTD01000007.1 Protein Homology CDS 28976 30757 . - 0 ID=cds-WP_016480880.1;Parent=gene-D5F94_RS06195;Dbxref=GenBank:WP_016480880.1;Name=WP_016480880.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649308.1;locus_tag=D5F94_RS06195;product=excinuclease ABC subunit UvrC;protein_id=WP_016480880.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 30916 31683 . + . ID=gene-D5F94_RS06200;Name=D5F94_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06200;old_locus_tag=D5F94_06200 NZ_QYTD01000007.1 Protein Homology CDS 30916 31683 . + 0 ID=cds-WP_124749470.1;Parent=gene-D5F94_RS06200;Dbxref=GenBank:WP_124749470.1;Name=WP_124749470.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000567582.1;locus_tag=D5F94_RS06200;product=epoxyqueuosine reductase QueH;protein_id=WP_124749470.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 31742 33082 . - . ID=gene-D5F94_RS06205;Name=D5F94_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06205;old_locus_tag=D5F94_06205 NZ_QYTD01000007.1 Protein Homology CDS 31742 33082 . - 0 ID=cds-WP_016502960.1;Parent=gene-D5F94_RS06205;Dbxref=GenBank:WP_016502960.1;Name=WP_016502960.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285047.1;locus_tag=D5F94_RS06205;product=MATE family efflux transporter;protein_id=WP_016502960.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 33182 33598 . - . ID=gene-D5F94_RS06210;Name=D5F94_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06210;old_locus_tag=D5F94_06210 NZ_QYTD01000007.1 Protein Homology CDS 33182 33598 . - 0 ID=cds-WP_161513764.1;Parent=gene-D5F94_RS06210;Dbxref=GenBank:WP_161513764.1;Name=WP_161513764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650340.1;locus_tag=D5F94_RS06210;product=VOC family protein;protein_id=WP_161513764.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 33602 34099 . - . ID=gene-D5F94_RS06215;Name=D5F94_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06215;old_locus_tag=D5F94_06215 NZ_QYTD01000007.1 Protein Homology CDS 33602 34099 . - 0 ID=cds-WP_016502962.1;Parent=gene-D5F94_RS06215;Dbxref=GenBank:WP_016502962.1;Name=WP_016502962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502962.1;locus_tag=D5F94_RS06215;product=hypothetical protein;protein_id=WP_016502962.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 34329 34925 . + . ID=gene-D5F94_RS06220;Name=D5F94_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06220;old_locus_tag=D5F94_06220 NZ_QYTD01000007.1 Protein Homology CDS 34329 34925 . + 0 ID=cds-WP_016502963.1;Parent=gene-D5F94_RS06220;Dbxref=GenBank:WP_016502963.1;Name=WP_016502963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058613.1;locus_tag=D5F94_RS06220;product=Ltp family lipoprotein;protein_id=WP_016502963.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 35180 35713 . - . ID=gene-D5F94_RS10630;Name=D5F94_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10630;old_locus_tag=D5F94_06225 NZ_QYTD01000007.1 Protein Homology CDS 35180 35713 . - 0 ID=cds-WP_016502964.1;Parent=gene-D5F94_RS10630;Dbxref=GenBank:WP_016502964.1;Name=WP_016502964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770971.1;locus_tag=D5F94_RS10630;product=hypothetical protein;protein_id=WP_016502964.1;transl_table=11 NZ_QYTD01000007.1 RefSeq gene 36264 36512 . - . ID=gene-D5F94_RS06235;Name=D5F94_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06235;old_locus_tag=D5F94_06235 NZ_QYTD01000007.1 Protein Homology CDS 36264 36512 . - 0 ID=cds-WP_260424804.1;Parent=gene-D5F94_RS06235;Dbxref=GenBank:WP_260424804.1;Name=WP_260424804.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=D5F94_RS06235;product=ATP-binding cassette domain-containing protein;protein_id=WP_260424804.1;transl_table=11 NZ_QYTD01000007.1 RefSeq pseudogene 36585 36770 . - . ID=gene-D5F94_RS06240;Name=D5F94_RS06240;end_range=36770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06240;old_locus_tag=D5F94_06240;partial=true;pseudo=true NZ_QYTD01000007.1 Protein Homology CDS 36585 36770 . - 0 ID=cds-D5F94_RS06240;Parent=gene-D5F94_RS06240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=36770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_093649841.1;locus_tag=D5F94_RS06240;partial=true;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_QYTD01000008.1 1 146993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000008.1 RefSeq region 1 146993 . + . ID=NZ_QYTD01000008.1:1..146993;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000008.1 RefSeq gene 1 168 . + . ID=gene-D5F94_RS06245;Name=D5F94_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06245;old_locus_tag=D5F94_06245;partial=true;start_range=.,1 NZ_QYTD01000008.1 Protein Homology CDS 1 168 . + 0 ID=cds-WP_142997327.1;Parent=gene-D5F94_RS06245;Dbxref=GenBank:WP_142997327.1;Name=WP_142997327.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611995.1;locus_tag=D5F94_RS06245;partial=true;product=IS3 family transposase;protein_id=WP_142997327.1;start_range=.,1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 211 441 . - . ID=gene-D5F94_RS06250;Name=D5F94_RS06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06250;old_locus_tag=D5F94_06250;partial=true;pseudo=true;start_range=.,211 NZ_QYTD01000008.1 Protein Homology CDS 211 441 . - 0 ID=cds-D5F94_RS06250;Parent=gene-D5F94_RS06250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS06250;partial=true;product=transposase;pseudo=true;start_range=.,211;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 520 705 . + . ID=gene-D5F94_RS06255;Name=D5F94_RS06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06255;old_locus_tag=D5F94_06255;partial=true;pseudo=true;start_range=.,520 NZ_QYTD01000008.1 Protein Homology CDS 520 705 . + 0 ID=cds-D5F94_RS06255;Parent=gene-D5F94_RS06255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647433.1;locus_tag=D5F94_RS06255;partial=true;product=hypothetical protein;pseudo=true;start_range=.,520;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 710 1558 . + . ID=gene-D5F94_RS06260;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=D5F94_RS06260;old_locus_tag=D5F94_06260 NZ_QYTD01000008.1 Protein Homology CDS 710 1558 . + 0 ID=cds-WP_086163516.1;Parent=gene-D5F94_RS06260;Dbxref=GenBank:WP_086163516.1;Name=WP_086163516.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7c;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922510.1;locus_tag=D5F94_RS06260;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_086163516.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 1560 2231 . + . ID=gene-D5F94_RS06265;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=D5F94_RS06265;old_locus_tag=D5F94_06265 NZ_QYTD01000008.1 Protein Homology CDS 1560 2231 . + 0 ID=cds-WP_000262367.1;Parent=gene-D5F94_RS06265;Dbxref=GenBank:WP_000262367.1;Name=WP_000262367.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262367.1;locus_tag=D5F94_RS06265;product=CRISPR-associated protein Cas4;protein_id=WP_000262367.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 2228 3232 . + . ID=gene-D5F94_RS06270;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=D5F94_RS06270;old_locus_tag=D5F94_06270 NZ_QYTD01000008.1 Protein Homology CDS 2228 3232 . + 0 ID=cds-WP_016502590.1;Parent=gene-D5F94_RS06270;Dbxref=GenBank:WP_016502590.1;Name=WP_016502590.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019314881.1;locus_tag=D5F94_RS06270;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_016502590.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 3243 3536 . + . ID=gene-D5F94_RS06275;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=D5F94_RS06275;old_locus_tag=D5F94_06275 NZ_QYTD01000008.1 Protein Homology CDS 3243 3536 . + 0 ID=cds-WP_000989528.1;Parent=gene-D5F94_RS06275;Dbxref=GenBank:WP_000989528.1;Name=WP_000989528.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002280569.1;locus_tag=D5F94_RS06275;product=CRISPR-associated endonuclease Cas2;protein_id=WP_000989528.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 3863 4084 . + . ID=gene-D5F94_RS10800;Name=D5F94_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10800 NZ_QYTD01000008.1 GeneMarkS-2+ CDS 3863 4084 . + 0 ID=cds-WP_446539751.1;Parent=gene-D5F94_RS10800;Dbxref=GenBank:WP_446539751.1;Name=WP_446539751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D5F94_RS10800;product=hypothetical protein;protein_id=WP_446539751.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 4182 5141 . + . ID=gene-D5F94_RS06280;Name=D5F94_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06280;old_locus_tag=D5F94_06280 NZ_QYTD01000008.1 Protein Homology CDS 4182 5141 . + 0 ID=cds-WP_016502592.1;Parent=gene-D5F94_RS06280;Dbxref=GenBank:WP_016502592.1;Name=WP_016502592.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631803.1;locus_tag=D5F94_RS06280;product=Gfo/Idh/MocA family protein;protein_id=WP_016502592.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 5302 6204 . + . ID=gene-D5F94_RS06285;Name=D5F94_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06285;old_locus_tag=D5F94_06285 NZ_QYTD01000008.1 Protein Homology CDS 5302 6204 . + 0 ID=cds-WP_016502593.1;Parent=gene-D5F94_RS06285;Dbxref=GenBank:WP_016502593.1;Name=WP_016502593.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492950.1;locus_tag=D5F94_RS06285;product=magnesium transporter CorA family protein;protein_id=WP_016502593.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 6364 7428 . + . ID=gene-D5F94_RS06290;Name=D5F94_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06290;old_locus_tag=D5F94_06290 NZ_QYTD01000008.1 Protein Homology CDS 6364 7428 . + 0 ID=cds-WP_000021293.1;Parent=gene-D5F94_RS06290;Dbxref=GenBank:WP_000021293.1;Name=WP_000021293.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649463.1;locus_tag=D5F94_RS06290;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000021293.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 7543 8535 . + . ID=gene-D5F94_RS06295;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=D5F94_RS06295;old_locus_tag=D5F94_06295 NZ_QYTD01000008.1 Protein Homology CDS 7543 8535 . + 0 ID=cds-WP_016502595.1;Parent=gene-D5F94_RS06295;Dbxref=GenBank:WP_016502595.1;Name=WP_016502595.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502595.1;locus_tag=D5F94_RS06295;product=aspartate--ammonia ligase;protein_id=WP_016502595.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 8580 9002 . - . ID=gene-D5F94_RS06300;Name=D5F94_RS06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06300;old_locus_tag=D5F94_06300;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 8580 9002 . - 0 ID=cds-D5F94_RS06300;Parent=gene-D5F94_RS06300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001893380.1;locus_tag=D5F94_RS06300;product=bacteriocin transport accessory protein;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 9159 9698 . + . ID=gene-D5F94_RS06305;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=D5F94_RS06305;old_locus_tag=D5F94_06305 NZ_QYTD01000008.1 Protein Homology CDS 9159 9698 . + 0 ID=cds-WP_086163248.1;Parent=gene-D5F94_RS06305;Dbxref=GenBank:WP_086163248.1;Name=WP_086163248.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058402.1;locus_tag=D5F94_RS06305;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_086163248.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 9710 10000 . + . ID=gene-D5F94_RS06310;Name=D5F94_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06310;old_locus_tag=D5F94_06310 NZ_QYTD01000008.1 Protein Homology CDS 9710 10000 . + 0 ID=cds-WP_000384889.1;Parent=gene-D5F94_RS06310;Dbxref=GenBank:WP_000384889.1;Name=WP_000384889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384890.1;locus_tag=D5F94_RS06310;product=hypothetical protein;protein_id=WP_000384889.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 9997 10482 . + . ID=gene-D5F94_RS06315;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=D5F94_RS06315;old_locus_tag=D5F94_06315 NZ_QYTD01000008.1 Protein Homology CDS 9997 10482 . + 0 ID=cds-WP_016480407.1;Parent=gene-D5F94_RS06315;Dbxref=GenBank:WP_016480407.1;Name=WP_016480407.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161892.1;locus_tag=D5F94_RS06315;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_016480407.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 10472 11545 . + . ID=gene-D5F94_RS06320;Name=D5F94_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06320;old_locus_tag=D5F94_06320 NZ_QYTD01000008.1 Protein Homology CDS 10472 11545 . + 0 ID=cds-WP_016480408.1;Parent=gene-D5F94_RS06320;Dbxref=GenBank:WP_016480408.1;Name=WP_016480408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790656.1;locus_tag=D5F94_RS06320;product=SepM family pheromone-processing serine protease;protein_id=WP_016480408.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 11620 12953 . + . ID=gene-D5F94_RS06325;Name=D5F94_RS06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06325;old_locus_tag=D5F94_06325;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 11620 12953 . + 0 ID=cds-D5F94_RS06325;Parent=gene-D5F94_RS06325;Note=frameshifted;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644500.1;locus_tag=D5F94_RS06325;product=bifunctional metallophosphatase/5'-nucleotidase;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 13022 13600 . + . ID=gene-D5F94_RS06330;Name=D5F94_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06330;old_locus_tag=D5F94_06330 NZ_QYTD01000008.1 Protein Homology CDS 13022 13600 . + 0 ID=cds-WP_001224500.1;Parent=gene-D5F94_RS06330;Dbxref=GenBank:WP_001224500.1;Name=WP_001224500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647065.1;locus_tag=D5F94_RS06330;product=YutD family protein;protein_id=WP_001224500.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 13651 14757 . + . ID=gene-D5F94_RS06335;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=D5F94_RS06335;old_locus_tag=D5F94_06335 NZ_QYTD01000008.1 Protein Homology CDS 13651 14757 . + 0 ID=cds-WP_001124994.1;Parent=gene-D5F94_RS06335;Dbxref=GenBank:WP_001124994.1;Name=WP_001124994.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124995.1;locus_tag=D5F94_RS06335;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_001124994.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 14757 15272 . + . ID=gene-D5F94_RS06340;Name=D5F94_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06340;old_locus_tag=D5F94_06340 NZ_QYTD01000008.1 Protein Homology CDS 14757 15272 . + 0 ID=cds-WP_000919803.1;Parent=gene-D5F94_RS06340;Dbxref=GenBank:WP_000919803.1;Name=WP_000919803.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631809.1;locus_tag=D5F94_RS06340;product=VanZ family protein;protein_id=WP_000919803.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 15451 17196 . + . ID=gene-D5F94_RS06345;Name=D5F94_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06345;old_locus_tag=D5F94_06345 NZ_QYTD01000008.1 Protein Homology CDS 15451 17196 . + 0 ID=cds-WP_016502599.1;Parent=gene-D5F94_RS06345;Dbxref=GenBank:WP_016502599.1;Name=WP_016502599.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063634.1;locus_tag=D5F94_RS06345;product=ABC transporter ATP-binding protein;protein_id=WP_016502599.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 17186 18925 . + . ID=gene-D5F94_RS06350;Name=D5F94_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06350;old_locus_tag=D5F94_06350 NZ_QYTD01000008.1 Protein Homology CDS 17186 18925 . + 0 ID=cds-WP_016502600.1;Parent=gene-D5F94_RS06350;Dbxref=GenBank:WP_016502600.1;Name=WP_016502600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058404.1;locus_tag=D5F94_RS06350;product=ABC transporter ATP-binding protein;protein_id=WP_016502600.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 19053 19620 . + . ID=gene-D5F94_RS06355;Name=D5F94_RS06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06355;old_locus_tag=D5F94_06355;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 19053 19620 . + 0 ID=cds-D5F94_RS06355;Parent=gene-D5F94_RS06355;Note=frameshifted;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647068.1;locus_tag=D5F94_RS06355;product=aminodeoxychorismate/anthranilate synthase component II;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 19688 20227 . - . ID=gene-D5F94_RS06360;Name=D5F94_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06360;old_locus_tag=D5F94_06360 NZ_QYTD01000008.1 Protein Homology CDS 19688 20227 . - 0 ID=cds-WP_000857893.1;Parent=gene-D5F94_RS06360;Dbxref=GenBank:WP_000857893.1;Name=WP_000857893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857893.1;locus_tag=D5F94_RS06360;product=biotin transporter BioY;protein_id=WP_000857893.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 20228 21220 . - . ID=gene-D5F94_RS06365;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=D5F94_RS06365;old_locus_tag=D5F94_06365 NZ_QYTD01000008.1 Protein Homology CDS 20228 21220 . - 0 ID=cds-WP_000009965.1;Parent=gene-D5F94_RS06365;Dbxref=GenBank:WP_000009965.1;Name=WP_000009965.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009960.1;locus_tag=D5F94_RS06365;product=biotin synthase BioB;protein_id=WP_000009965.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 21345 21860 . + . ID=gene-D5F94_RS06370;Name=D5F94_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06370;old_locus_tag=D5F94_06370 NZ_QYTD01000008.1 Protein Homology CDS 21345 21860 . + 0 ID=cds-WP_016502602.1;Parent=gene-D5F94_RS06370;Dbxref=GenBank:WP_016502602.1;Name=WP_016502602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732606.1;locus_tag=D5F94_RS06370;product=hypothetical protein;protein_id=WP_016502602.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 21850 22965 . + . ID=gene-D5F94_RS06375;Name=D5F94_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06375;old_locus_tag=D5F94_06375 NZ_QYTD01000008.1 Protein Homology CDS 21850 22965 . + 0 ID=cds-WP_016502603.1;Parent=gene-D5F94_RS06375;Dbxref=GenBank:WP_016502603.1;Name=WP_016502603.1;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796101.1;locus_tag=D5F94_RS06375;product=thiolase family protein;protein_id=WP_016502603.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 22958 24187 . + . ID=gene-D5F94_RS06380;Name=D5F94_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06380;old_locus_tag=D5F94_06380 NZ_QYTD01000008.1 Protein Homology CDS 22958 24187 . + 0 ID=cds-WP_124749087.1;Parent=gene-D5F94_RS06380;Dbxref=GenBank:WP_124749087.1;Name=WP_124749087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631813.1;locus_tag=D5F94_RS06380;product=AMP-binding protein;protein_id=WP_124749087.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 24300 24932 . + . ID=gene-D5F94_RS06385;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=D5F94_RS06385;old_locus_tag=D5F94_06385 NZ_QYTD01000008.1 Protein Homology CDS 24300 24932 . + 0 ID=cds-WP_000949176.1;Parent=gene-D5F94_RS06385;Dbxref=GenBank:WP_000949176.1;Name=WP_000949176.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949179.1;locus_tag=D5F94_RS06385;product=endonuclease III;protein_id=WP_000949176.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 24933 25328 . - . ID=gene-D5F94_RS06390;Name=D5F94_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06390;old_locus_tag=D5F94_06390 NZ_QYTD01000008.1 Protein Homology CDS 24933 25328 . - 0 ID=cds-WP_001884316.1;Parent=gene-D5F94_RS06390;Dbxref=GenBank:WP_001884316.1;Name=WP_001884316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001884316.1;locus_tag=D5F94_RS06390;product=prepilin peptidase;protein_id=WP_001884316.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 25483 25692 . + . ID=gene-D5F94_RS06395;Name=D5F94_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06395;old_locus_tag=D5F94_06395 NZ_QYTD01000008.1 Protein Homology CDS 25483 25692 . + 0 ID=cds-WP_000865866.1;Parent=gene-D5F94_RS06395;Dbxref=GenBank:WP_000865866.1;Name=WP_000865866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865866.1;locus_tag=D5F94_RS06395;product=YqgQ family protein;protein_id=WP_000865866.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 25689 26657 . + . ID=gene-D5F94_RS06400;Name=D5F94_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06400;old_locus_tag=D5F94_06400 NZ_QYTD01000008.1 Protein Homology CDS 25689 26657 . + 0 ID=cds-WP_000038547.1;Parent=gene-D5F94_RS06400;Dbxref=GenBank:WP_000038547.1;Name=WP_000038547.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038549.1;locus_tag=D5F94_RS06400;product=ROK family glucokinase;protein_id=WP_000038547.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 26669 27049 . + . ID=gene-D5F94_RS06405;Name=D5F94_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06405;old_locus_tag=D5F94_06405 NZ_QYTD01000008.1 Protein Homology CDS 26669 27049 . + 0 ID=cds-WP_000367664.1;Parent=gene-D5F94_RS06405;Dbxref=GenBank:WP_000367664.1;Name=WP_000367664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480417.1;locus_tag=D5F94_RS06405;product=rhodanese-like domain-containing protein;protein_id=WP_000367664.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 27281 29122 . + . ID=gene-D5F94_RS06410;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=D5F94_RS06410;old_locus_tag=D5F94_06410 NZ_QYTD01000008.1 Protein Homology CDS 27281 29122 . + 0 ID=cds-WP_000183433.1;Parent=gene-D5F94_RS06410;Dbxref=GenBank:WP_000183433.1;Name=WP_000183433.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381299.1;locus_tag=D5F94_RS06410;product=translational GTPase TypA;protein_id=WP_000183433.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 29167 29412 . + . ID=gene-D5F94_RS06415;Name=D5F94_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06415;old_locus_tag=D5F94_06415 NZ_QYTD01000008.1 Protein Homology CDS 29167 29412 . + 0 ID=cds-WP_000499533.1;Parent=gene-D5F94_RS06415;Dbxref=GenBank:WP_000499533.1;Name=WP_000499533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499534.1;locus_tag=D5F94_RS06415;product=DUF3165 family protein;protein_id=WP_000499533.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 29542 30897 . + . ID=gene-D5F94_RS06420;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=D5F94_RS06420;old_locus_tag=D5F94_06420 NZ_QYTD01000008.1 Protein Homology CDS 29542 30897 . + 0 ID=cds-WP_016502606.1;Parent=gene-D5F94_RS06420;Dbxref=GenBank:WP_016502606.1;Name=WP_016502606.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849675.1;locus_tag=D5F94_RS06420;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_016502606.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 30900 31976 . + . ID=gene-D5F94_RS06425;Name=D5F94_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06425;old_locus_tag=D5F94_06425 NZ_QYTD01000008.1 Protein Homology CDS 30900 31976 . + 0 ID=cds-WP_016502607.1;Parent=gene-D5F94_RS06425;Dbxref=GenBank:WP_016502607.1;Name=WP_016502607.1;Ontology_term=GO:0005975,GO:0007049,GO:0008360,GO:0009252,GO:0030259,GO:0051301,GO:0071555,GO:0050511,GO:0051991,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA,UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2%2C6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity|0051991||IEA;go_process=carbohydrate metabolic process|0005975||IEA,cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,obsolete lipid glycosylation|0030259||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649469.1;locus_tag=D5F94_RS06425;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_016502607.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 31980 33116 . + . ID=gene-D5F94_RS06430;Name=D5F94_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06430;old_locus_tag=D5F94_06430 NZ_QYTD01000008.1 Protein Homology CDS 31980 33116 . + 0 ID=cds-WP_001124862.1;Parent=gene-D5F94_RS06430;Dbxref=GenBank:WP_001124862.1;Name=WP_001124862.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124859.1;locus_tag=D5F94_RS06430;product=cell division protein FtsQ/DivIB;protein_id=WP_001124862.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 33389 34582 . + . ID=gene-D5F94_RS06435;Name=ftsA;end_range=34582,.;gbkey=Gene;gene=ftsA;gene_biotype=pseudogene;locus_tag=D5F94_RS06435;old_locus_tag=D5F94_06435;partial=true;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 33389 34582 . + 0 ID=cds-D5F94_RS06435;Parent=gene-D5F94_RS06435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043093,GO:0005515,GO:0005524;end_range=34582,.;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983860.1;locus_tag=D5F94_RS06435;partial=true;product=cell division protein FtsA;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 34556 34762 . + . ID=gene-D5F94_RS10780;Name=D5F94_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10780 NZ_QYTD01000008.1 Protein Homology CDS 34556 34762 . + 0 ID=cds-WP_370443801.1;Parent=gene-D5F94_RS10780;Dbxref=GenBank:WP_370443801.1;Name=WP_370443801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023409.6;locus_tag=D5F94_RS10780;product=cell division protein FtsA C-terminal domain-containing protein;protein_id=WP_370443801.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 34784 36064 . + . ID=gene-D5F94_RS06440;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=D5F94_RS06440;old_locus_tag=D5F94_06440 NZ_QYTD01000008.1 Protein Homology CDS 34784 36064 . + 0 ID=cds-WP_124749472.1;Parent=gene-D5F94_RS06440;Dbxref=GenBank:WP_124749472.1;Name=WP_124749472.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650336.1;locus_tag=D5F94_RS06440;product=cell division protein FtsZ;protein_id=WP_124749472.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 36070 36744 . + . ID=gene-D5F94_RS06445;Name=D5F94_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06445;old_locus_tag=D5F94_06445 NZ_QYTD01000008.1 Protein Homology CDS 36070 36744 . + 0 ID=cds-WP_016502608.1;Parent=gene-D5F94_RS06445;Dbxref=GenBank:WP_016502608.1;Name=WP_016502608.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981484.1;locus_tag=D5F94_RS06445;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_016502608.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 36756 37361 . + . ID=gene-D5F94_RS06450;Name=D5F94_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06450;old_locus_tag=D5F94_06450 NZ_QYTD01000008.1 Protein Homology CDS 36756 37361 . + 0 ID=cds-WP_001185362.1;Parent=gene-D5F94_RS06450;Dbxref=GenBank:WP_001185362.1;Name=WP_001185362.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185364.1;locus_tag=D5F94_RS06450;product=cell division protein SepF;protein_id=WP_001185362.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 37364 37618 . + . ID=gene-D5F94_RS06455;Name=D5F94_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06455;old_locus_tag=D5F94_06455 NZ_QYTD01000008.1 Protein Homology CDS 37364 37618 . + 0 ID=cds-WP_000604717.1;Parent=gene-D5F94_RS06455;Dbxref=GenBank:WP_000604717.1;Name=WP_000604717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604718.1;locus_tag=D5F94_RS06455;product=YggT family protein;protein_id=WP_000604717.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 37620 38408 . + . ID=gene-D5F94_RS06460;Name=D5F94_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06460;old_locus_tag=D5F94_06460 NZ_QYTD01000008.1 Protein Homology CDS 37620 38408 . + 0 ID=cds-WP_016502609.1;Parent=gene-D5F94_RS06460;Dbxref=GenBank:WP_016502609.1;Name=WP_016502609.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649471.1;locus_tag=D5F94_RS06460;product=YlmH family RNA-binding protein;protein_id=WP_016502609.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 38418 39188 . + . ID=gene-D5F94_RS06465;Name=D5F94_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06465;old_locus_tag=D5F94_06465 NZ_QYTD01000008.1 Protein Homology CDS 38418 39188 . + 0 ID=cds-WP_124749474.1;Parent=gene-D5F94_RS06465;Dbxref=GenBank:WP_124749474.1;Name=WP_124749474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131466.1;locus_tag=D5F94_RS06465;product=DivIVA domain-containing protein;protein_id=WP_124749474.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 39473 42265 . + . ID=gene-D5F94_RS06470;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=D5F94_RS06470;old_locus_tag=D5F94_06470 NZ_QYTD01000008.1 Protein Homology CDS 39473 42265 . + 0 ID=cds-WP_016502610.1;Parent=gene-D5F94_RS06470;Dbxref=GenBank:WP_016502610.1;Name=WP_016502610.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768163.1;locus_tag=D5F94_RS06470;product=isoleucine--tRNA ligase;protein_id=WP_016502610.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 42382 42684 . - . ID=gene-D5F94_RS06475;Name=D5F94_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06475;old_locus_tag=D5F94_06475 NZ_QYTD01000008.1 Protein Homology CDS 42382 42684 . - 0 ID=cds-WP_001237035.1;Parent=gene-D5F94_RS06475;Dbxref=GenBank:WP_001237035.1;Name=WP_001237035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647579.1;locus_tag=D5F94_RS06475;product=DUF1827 family protein;protein_id=WP_001237035.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 42748 43203 . - . ID=gene-D5F94_RS06480;Name=D5F94_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06480;old_locus_tag=D5F94_06480 NZ_QYTD01000008.1 Protein Homology CDS 42748 43203 . - 0 ID=cds-WP_000184290.1;Parent=gene-D5F94_RS06480;Dbxref=GenBank:WP_000184290.1;Name=WP_000184290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184293.1;locus_tag=D5F94_RS06480;product=NUDIX hydrolase;protein_id=WP_000184290.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 43389 45650 . - . ID=gene-D5F94_RS06485;Name=D5F94_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06485;old_locus_tag=D5F94_06485 NZ_QYTD01000008.1 Protein Homology CDS 43389 45650 . - 0 ID=cds-WP_016502611.1;Parent=gene-D5F94_RS06485;Dbxref=GenBank:WP_016502611.1;Name=WP_016502611.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650651.1;locus_tag=D5F94_RS06485;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_016502611.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 45948 46178 . + . ID=gene-D5F94_RS06495;Name=D5F94_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06495;old_locus_tag=D5F94_06495 NZ_QYTD01000008.1 Protein Homology CDS 45948 46178 . + 0 ID=cds-WP_000443582.1;Parent=gene-D5F94_RS06495;Dbxref=GenBank:WP_000443582.1;Name=WP_000443582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592360.1;locus_tag=D5F94_RS06495;product=DUF1797 family protein;protein_id=WP_000443582.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 46319 47011 . + . ID=gene-D5F94_RS06500;Name=D5F94_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06500;old_locus_tag=D5F94_06500 NZ_QYTD01000008.1 Protein Homology CDS 46319 47011 . + 0 ID=cds-WP_001011647.1;Parent=gene-D5F94_RS06500;Dbxref=GenBank:WP_001011647.1;Name=WP_001011647.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001011649.1;locus_tag=D5F94_RS06500;product=amino acid ABC transporter permease;protein_id=WP_001011647.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 47004 47738 . + . ID=gene-D5F94_RS06505;Name=D5F94_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06505;old_locus_tag=D5F94_06505 NZ_QYTD01000008.1 Protein Homology CDS 47004 47738 . + 0 ID=cds-WP_000230128.1;Parent=gene-D5F94_RS06505;Dbxref=GenBank:WP_000230128.1;Name=WP_000230128.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019805208.1;locus_tag=D5F94_RS06505;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000230128.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 48025 49719 . + . ID=gene-D5F94_RS06510;Name=D5F94_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06510;old_locus_tag=D5F94_06510 NZ_QYTD01000008.1 Protein Homology CDS 48025 49719 . + 0 ID=cds-WP_001106852.1;Parent=gene-D5F94_RS06510;Dbxref=GenBank:WP_001106852.1;Name=WP_001106852.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106850.1;locus_tag=D5F94_RS06510;product=phospho-sugar mutase;protein_id=WP_001106852.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 49858 50712 . + . ID=gene-D5F94_RS06515;Name=D5F94_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06515;old_locus_tag=D5F94_06515 NZ_QYTD01000008.1 Protein Homology CDS 49858 50712 . + 0 ID=cds-WP_000137498.1;Parent=gene-D5F94_RS06515;Dbxref=GenBank:WP_000137498.1;Name=WP_000137498.1;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137498.1;locus_tag=D5F94_RS06515;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_000137498.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 50709 51545 . + . ID=gene-D5F94_RS06520;Name=D5F94_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06520;old_locus_tag=D5F94_06520 NZ_QYTD01000008.1 Protein Homology CDS 50709 51545 . + 0 ID=cds-WP_000634978.1;Parent=gene-D5F94_RS06520;Dbxref=GenBank:WP_000634978.1;Name=WP_000634978.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634980.1;locus_tag=D5F94_RS06520;product=NAD(P)H-hydrate dehydratase;protein_id=WP_000634978.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 51671 53011 . + . ID=gene-D5F94_RS06525;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=D5F94_RS06525;old_locus_tag=D5F94_06525 NZ_QYTD01000008.1 Protein Homology CDS 51671 53011 . + 0 ID=cds-WP_016502612.1;Parent=gene-D5F94_RS06525;Dbxref=GenBank:WP_016502612.1;Name=WP_016502612.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001286947.1;locus_tag=D5F94_RS06525;product=exodeoxyribonuclease VII large subunit;protein_id=WP_016502612.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 52989 53204 . + . ID=gene-D5F94_RS06530;Name=D5F94_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06530;old_locus_tag=D5F94_06530 NZ_QYTD01000008.1 Protein Homology CDS 52989 53204 . + 0 ID=cds-WP_001280898.1;Parent=gene-D5F94_RS06530;Dbxref=GenBank:WP_001280898.1;Name=WP_001280898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280900.1;locus_tag=D5F94_RS06530;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001280898.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 53204 54076 . + . ID=gene-D5F94_RS06535;Name=D5F94_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06535;old_locus_tag=D5F94_06535 NZ_QYTD01000008.1 Protein Homology CDS 53204 54076 . + 0 ID=cds-WP_000256279.1;Parent=gene-D5F94_RS06535;Dbxref=GenBank:WP_000256279.1;Name=WP_000256279.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256278.1;locus_tag=D5F94_RS06535;product=polyprenyl synthetase family protein;protein_id=WP_000256279.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 54069 54896 . + . ID=gene-D5F94_RS06540;Name=D5F94_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06540;old_locus_tag=D5F94_06540 NZ_QYTD01000008.1 Protein Homology CDS 54069 54896 . + 0 ID=cds-WP_001041037.1;Parent=gene-D5F94_RS06540;Dbxref=GenBank:WP_001041037.1;Name=WP_001041037.1;Ontology_term=GO:0032259,GO:0003723,GO:0008168;gbkey=CDS;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650752.1;locus_tag=D5F94_RS06540;product=TlyA family RNA methyltransferase;protein_id=WP_001041037.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 54883 55356 . + . ID=gene-D5F94_RS06545;Name=D5F94_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06545;old_locus_tag=D5F94_06545 NZ_QYTD01000008.1 Protein Homology CDS 54883 55356 . + 0 ID=cds-WP_000747940.1;Parent=gene-D5F94_RS06545;Dbxref=GenBank:WP_000747940.1;Name=WP_000747940.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647076.1;locus_tag=D5F94_RS06545;product=arginine repressor;protein_id=WP_000747940.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 55368 57026 . + . ID=gene-D5F94_RS06550;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=D5F94_RS06550;old_locus_tag=D5F94_06550 NZ_QYTD01000008.1 Protein Homology CDS 55368 57026 . + 0 ID=cds-WP_016480429.1;Parent=gene-D5F94_RS06550;Dbxref=GenBank:WP_016480429.1;Name=WP_016480429.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923612.1;locus_tag=D5F94_RS06550;product=DNA repair protein RecN;protein_id=WP_016480429.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 57144 57980 . + . ID=gene-D5F94_RS06555;Name=D5F94_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06555;old_locus_tag=D5F94_06555 NZ_QYTD01000008.1 Protein Homology CDS 57144 57980 . + 0 ID=cds-WP_016480430.1;Parent=gene-D5F94_RS06555;Dbxref=GenBank:WP_016480430.1;Name=WP_016480430.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034838.1;locus_tag=D5F94_RS06555;product=DegV family protein;protein_id=WP_016480430.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 57973 58812 . + . ID=gene-D5F94_RS06560;Name=D5F94_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06560;old_locus_tag=D5F94_06560 NZ_QYTD01000008.1 Protein Homology CDS 57973 58812 . + 0 ID=cds-WP_041165657.1;Parent=gene-D5F94_RS06560;Dbxref=GenBank:WP_041165657.1;Name=WP_041165657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001035225.1;locus_tag=D5F94_RS06560;product=SGNH/GDSL hydrolase family protein;protein_id=WP_041165657.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 58787 59389 . + . ID=gene-D5F94_RS06565;Name=D5F94_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06565;old_locus_tag=D5F94_06565 NZ_QYTD01000008.1 Protein Homology CDS 58787 59389 . + 0 ID=cds-WP_016480432.1;Parent=gene-D5F94_RS06565;Dbxref=GenBank:WP_016480432.1;Name=WP_016480432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647077.1;locus_tag=D5F94_RS06565;product=YpmS family protein;protein_id=WP_016480432.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 59492 59767 . + . ID=gene-D5F94_RS06570;Name=D5F94_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06570;old_locus_tag=D5F94_06570 NZ_QYTD01000008.1 Protein Homology CDS 59492 59767 . + 0 ID=cds-WP_001284634.1;Parent=gene-D5F94_RS06570;Dbxref=GenBank:WP_001284634.1;Name=WP_001284634.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950996.1;locus_tag=D5F94_RS06570;product=HU family DNA-binding protein;protein_id=WP_001284634.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 59964 60161 . + . ID=gene-D5F94_RS06575;Name=D5F94_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06575;old_locus_tag=D5F94_06575 NZ_QYTD01000008.1 Protein Homology CDS 59964 60161 . + 0 ID=cds-WP_001290370.1;Parent=gene-D5F94_RS06575;Dbxref=GenBank:WP_001290370.1;Name=WP_001290370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290369.1;locus_tag=D5F94_RS06575;product=hypothetical protein;protein_id=WP_001290370.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 60205 61137 . - . ID=gene-D5F94_RS06580;Name=D5F94_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06580;old_locus_tag=D5F94_06580 NZ_QYTD01000008.1 Protein Homology CDS 60205 61137 . - 0 ID=cds-WP_000254063.1;Parent=gene-D5F94_RS06580;Dbxref=GenBank:WP_000254063.1;Name=WP_000254063.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254063.1;locus_tag=D5F94_RS06580;product=dihydroorotate oxidase;protein_id=WP_000254063.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 61325 62560 . - . ID=gene-D5F94_RS06585;Name=D5F94_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06585;old_locus_tag=D5F94_06585 NZ_QYTD01000008.1 Protein Homology CDS 61325 62560 . - 0 ID=cds-WP_016502615.1;Parent=gene-D5F94_RS06585;Dbxref=GenBank:WP_016502615.1;Name=WP_016502615.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185395.1;locus_tag=D5F94_RS06585;product=aminoacyltransferase;protein_id=WP_016502615.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 62579 63790 . - . ID=gene-D5F94_RS06590;Name=D5F94_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06590;old_locus_tag=D5F94_06590 NZ_QYTD01000008.1 Protein Homology CDS 62579 63790 . - 0 ID=cds-WP_000285514.1;Parent=gene-D5F94_RS06590;Dbxref=GenBank:WP_000285514.1;Name=WP_000285514.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285508.1;locus_tag=D5F94_RS06590;product=aminoacyltransferase;protein_id=WP_000285514.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 63803 65023 . - . ID=gene-D5F94_RS06595;Name=D5F94_RS06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06595;old_locus_tag=D5F94_06595;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 63803 65023 . - 0 ID=cds-D5F94_RS06595;Parent=gene-D5F94_RS06595;Note=internal stop;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854600.1;locus_tag=D5F94_RS06595;product=aminoacyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 65023 65835 . - . ID=gene-D5F94_RS06600;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=D5F94_RS06600;old_locus_tag=D5F94_06600 NZ_QYTD01000008.1 Protein Homology CDS 65023 65835 . - 0 ID=cds-WP_016480435.1;Parent=gene-D5F94_RS06600;Dbxref=GenBank:WP_016480435.1;Name=WP_016480435.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200665.1;locus_tag=D5F94_RS06600;product=sugar-phosphatase;protein_id=WP_016480435.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 65906 67222 . - . ID=gene-D5F94_RS06605;Name=D5F94_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06605;old_locus_tag=D5F94_06605 NZ_QYTD01000008.1 Protein Homology CDS 65906 67222 . - 0 ID=cds-WP_016502619.1;Parent=gene-D5F94_RS06605;Dbxref=GenBank:WP_016502619.1;Name=WP_016502619.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646365.1;locus_tag=D5F94_RS06605;product=HD domain-containing protein;protein_id=WP_016502619.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 67298 67684 . + . ID=gene-D5F94_RS06610;Name=D5F94_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06610;old_locus_tag=D5F94_06610 NZ_QYTD01000008.1 Protein Homology CDS 67298 67684 . + 0 ID=cds-WP_001903189.1;Parent=gene-D5F94_RS06610;Dbxref=GenBank:WP_001903189.1;Name=WP_001903189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764119.1;locus_tag=D5F94_RS06610;product=DUF1934 domain-containing protein;protein_id=WP_001903189.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 68028 70712 . + . ID=gene-D5F94_RS06615;Name=D5F94_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06615;old_locus_tag=D5F94_06615 NZ_QYTD01000008.1 Protein Homology CDS 68028 70712 . + 0 ID=cds-WP_000910750.1;Parent=gene-D5F94_RS06615;Dbxref=GenBank:WP_000910750.1;Name=WP_000910750.1;Ontology_term=GO:0006816,GO:0005388,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=P-type calcium transporter activity|0005388||IEA,ATP binding|0005524||IEA;go_process=calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771360.1;locus_tag=D5F94_RS06615;product=calcium-translocating P-type ATPase%2C PMCA-type;protein_id=WP_000910750.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 70757 71617 . - . ID=gene-D5F94_RS06620;Name=D5F94_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06620;old_locus_tag=D5F94_06620 NZ_QYTD01000008.1 Protein Homology CDS 70757 71617 . - 0 ID=cds-WP_086163255.1;Parent=gene-D5F94_RS06620;Dbxref=GenBank:WP_086163255.1;Name=WP_086163255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163483.1;locus_tag=D5F94_RS06620;product=metallophosphoesterase;protein_id=WP_086163255.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 71769 73700 . + . ID=gene-D5F94_RS06625;Name=D5F94_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06625;old_locus_tag=D5F94_06625 NZ_QYTD01000008.1 Protein Homology CDS 71769 73700 . + 0 ID=cds-WP_016502623.1;Parent=gene-D5F94_RS06625;Dbxref=GenBank:WP_016502623.1;Name=WP_016502623.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064640.1;locus_tag=D5F94_RS06625;product=fructose-bisphosphatase class III;protein_id=WP_016502623.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 73790 74915 . + . ID=gene-D5F94_RS06630;Name=queG;gbkey=Gene;gene=queG;gene_biotype=pseudogene;locus_tag=D5F94_RS06630;old_locus_tag=D5F94_06630;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 73790 74915 . + 0 ID=cds-D5F94_RS06630;Parent=gene-D5F94_RS06630;Note=frameshifted;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351638.1;locus_tag=D5F94_RS06630;product=tRNA epoxyqueuosine(34) reductase QueG;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 74984 76082 . + . ID=gene-D5F94_RS06635;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=D5F94_RS06635;old_locus_tag=D5F94_06635 NZ_QYTD01000008.1 Protein Homology CDS 74984 75055 . + 0 ID=cds-WP_124749476.1;Parent=gene-D5F94_RS06635;Dbxref=GenBank:WP_124749476.1;Name=WP_124749476.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889043.1;locus_tag=D5F94_RS06635;product=peptide chain release factor 2;protein_id=WP_124749476.1;transl_table=11 NZ_QYTD01000008.1 Protein Homology CDS 75057 76082 . + 0 ID=cds-WP_124749476.1;Parent=gene-D5F94_RS06635;Dbxref=GenBank:WP_124749476.1;Name=WP_124749476.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889043.1;locus_tag=D5F94_RS06635;product=peptide chain release factor 2;protein_id=WP_124749476.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 76101 76793 . + . ID=gene-D5F94_RS06640;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=D5F94_RS06640;old_locus_tag=D5F94_06640 NZ_QYTD01000008.1 Protein Homology CDS 76101 76793 . + 0 ID=cds-WP_001173889.1;Parent=gene-D5F94_RS06640;Dbxref=GenBank:WP_001173889.1;Name=WP_001173889.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294955.1;locus_tag=D5F94_RS06640;product=cell division ATP-binding protein FtsE;protein_id=WP_001173889.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 76777 77706 . + . ID=gene-D5F94_RS06645;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=D5F94_RS06645;old_locus_tag=D5F94_06645 NZ_QYTD01000008.1 Protein Homology CDS 76777 77706 . + 0 ID=cds-WP_000236202.1;Parent=gene-D5F94_RS06645;Dbxref=GenBank:WP_000236202.1;Name=WP_000236202.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768486.1;locus_tag=D5F94_RS06645;product=permease-like cell division protein FtsX;protein_id=WP_000236202.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 77759 78469 . - . ID=gene-D5F94_RS06650;Name=D5F94_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06650;old_locus_tag=D5F94_06650 NZ_QYTD01000008.1 Protein Homology CDS 77759 78469 . - 0 ID=cds-WP_086163257.1;Parent=gene-D5F94_RS06650;Dbxref=GenBank:WP_086163257.1;Name=WP_086163257.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022568.1;locus_tag=D5F94_RS06650;product=alpha/beta hydrolase;protein_id=WP_086163257.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 78466 79101 . - . ID=gene-D5F94_RS06655;Name=D5F94_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06655;old_locus_tag=D5F94_06655 NZ_QYTD01000008.1 Protein Homology CDS 78466 79101 . - 0 ID=cds-WP_016502626.1;Parent=gene-D5F94_RS06655;Dbxref=GenBank:WP_016502626.1;Name=WP_016502626.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708399.1;locus_tag=D5F94_RS06655;product=MBL fold metallo-hydrolase;protein_id=WP_016502626.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 79332 80096 . + . ID=gene-D5F94_RS06660;Name=D5F94_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06660;old_locus_tag=D5F94_06660 NZ_QYTD01000008.1 Protein Homology CDS 79332 80096 . + 0 ID=cds-WP_000048144.1;Parent=gene-D5F94_RS06660;Dbxref=GenBank:WP_000048144.1;Name=WP_000048144.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048144.1;locus_tag=D5F94_RS06660;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_000048144.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 80246 82711 . + . ID=gene-D5F94_RS06665;Name=D5F94_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06665;old_locus_tag=D5F94_06665 NZ_QYTD01000008.1 Protein Homology CDS 80246 82711 . + 0 ID=cds-WP_307777617.1;Parent=gene-D5F94_RS06665;Dbxref=GenBank:WP_307777617.1;Name=WP_307777617.1;Ontology_term=GO:0006139,GO:0006260,GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA,DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058430.1;locus_tag=D5F94_RS06665;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=WP_307777617.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 82797 83990 . + . ID=gene-D5F94_RS06670;Name=D5F94_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06670;old_locus_tag=D5F94_06670 NZ_QYTD01000008.1 Protein Homology CDS 82797 83990 . + 0 ID=cds-WP_000221826.1;Parent=gene-D5F94_RS06670;Dbxref=GenBank:WP_000221826.1;Name=WP_000221826.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221826.1;locus_tag=D5F94_RS06670;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000221826.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 84011 85357 . + . ID=gene-D5F94_RS06675;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=D5F94_RS06675;old_locus_tag=D5F94_06675 NZ_QYTD01000008.1 Protein Homology CDS 84011 85357 . + 0 ID=cds-WP_000038473.1;Parent=gene-D5F94_RS06675;Dbxref=GenBank:WP_000038473.1;Name=WP_000038473.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038477.1;locus_tag=D5F94_RS06675;product=asparagine--tRNA ligase;protein_id=WP_000038473.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 85397 85954 . - . ID=gene-D5F94_RS06680;Name=D5F94_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06680;old_locus_tag=D5F94_06680 NZ_QYTD01000008.1 Protein Homology CDS 85397 85954 . - 0 ID=cds-WP_016502630.1;Parent=gene-D5F94_RS06680;Dbxref=GenBank:WP_016502630.1;Name=WP_016502630.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502630.1;locus_tag=D5F94_RS06680;product=ECF transporter S component;protein_id=WP_016502630.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 85951 86934 . - . ID=gene-D5F94_RS06685;Name=D5F94_RS06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06685;old_locus_tag=D5F94_06685;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 85951 86934 . - 0 ID=cds-D5F94_RS06685;Parent=gene-D5F94_RS06685;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031103.1;locus_tag=D5F94_RS06685;product=nucleoside hydrolase;pseudo=true;transl_table=11 NZ_QYTD01000008.1 cmsearch riboswitch 87078 87122 . - . ID=id-NZ_QYTD01000008.1:87078..87122;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000008.1 RefSeq gene 87180 87593 . - . ID=gene-D5F94_RS06695;Name=D5F94_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06695;old_locus_tag=D5F94_06695 NZ_QYTD01000008.1 Protein Homology CDS 87180 87593 . - 0 ID=cds-WP_000965179.1;Parent=gene-D5F94_RS06695;Dbxref=GenBank:WP_000965179.1;Name=WP_000965179.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771875.1;locus_tag=D5F94_RS06695;product=OsmC family protein;protein_id=WP_000965179.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 87747 88637 . + . ID=gene-D5F94_RS06700;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=D5F94_RS06700;old_locus_tag=D5F94_06700 NZ_QYTD01000008.1 Protein Homology CDS 87747 88637 . + 0 ID=cds-WP_086163261.1;Parent=gene-D5F94_RS06700;Dbxref=GenBank:WP_086163261.1;Name=WP_086163261.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278849.1;locus_tag=D5F94_RS06700;product=RNase adapter RapZ;protein_id=WP_086163261.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 88634 89608 . + . ID=gene-D5F94_RS06705;Name=D5F94_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06705;old_locus_tag=D5F94_06705 NZ_QYTD01000008.1 Protein Homology CDS 88634 89608 . + 0 ID=cds-WP_016502634.1;Parent=gene-D5F94_RS06705;Dbxref=GenBank:WP_016502634.1;Name=WP_016502634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231103.1;locus_tag=D5F94_RS06705;product=YvcK family protein;protein_id=WP_016502634.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 89605 90516 . + . ID=gene-D5F94_RS06710;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=D5F94_RS06710;old_locus_tag=D5F94_06710 NZ_QYTD01000008.1 Protein Homology CDS 89605 90516 . + 0 ID=cds-WP_000011319.1;Parent=gene-D5F94_RS06710;Dbxref=GenBank:WP_000011319.1;Name=WP_000011319.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011317.1;locus_tag=D5F94_RS06710;product=DNA-binding protein WhiA;protein_id=WP_000011319.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 90531 91928 . + . ID=gene-D5F94_RS06715;Name=D5F94_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06715;old_locus_tag=D5F94_06715 NZ_QYTD01000008.1 Protein Homology CDS 90531 91928 . + 0 ID=cds-WP_016502635.1;Parent=gene-D5F94_RS06715;Dbxref=GenBank:WP_016502635.1;Name=WP_016502635.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058433.1;locus_tag=D5F94_RS06715;product=C69 family dipeptidase;protein_id=WP_016502635.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 92070 93596 . + . ID=gene-D5F94_RS06720;Name=D5F94_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06720;old_locus_tag=D5F94_06720 NZ_QYTD01000008.1 Protein Homology CDS 92070 93596 . + 0 ID=cds-WP_001227401.1;Parent=gene-D5F94_RS06720;Dbxref=GenBank:WP_001227401.1;Name=WP_001227401.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285234.1;locus_tag=D5F94_RS06720;product=zinc ABC transporter substrate-binding protein AdcA;protein_id=WP_001227401.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 93709 93969 . - . ID=gene-D5F94_RS06725;Name=D5F94_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06725;old_locus_tag=D5F94_06725 NZ_QYTD01000008.1 Protein Homology CDS 93709 93969 . - 0 ID=cds-WP_000710757.1;Parent=gene-D5F94_RS06725;Dbxref=GenBank:WP_000710757.1;Name=WP_000710757.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370011.1;locus_tag=D5F94_RS06725;product=type B 50S ribosomal protein L31;protein_id=WP_000710757.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 94078 95013 . - . ID=gene-D5F94_RS06730;Name=D5F94_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06730;old_locus_tag=D5F94_06730 NZ_QYTD01000008.1 Protein Homology CDS 94078 95013 . - 0 ID=cds-WP_016502636.1;Parent=gene-D5F94_RS06730;Dbxref=GenBank:WP_016502636.1;Name=WP_016502636.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583237.1;locus_tag=D5F94_RS06730;product=DHH family phosphoesterase;protein_id=WP_016502636.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 95279 96301 . + . ID=gene-D5F94_RS06735;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=D5F94_RS06735;old_locus_tag=D5F94_06735 NZ_QYTD01000008.1 Protein Homology CDS 95279 96301 . + 0 ID=cds-WP_016502637.1;Parent=gene-D5F94_RS06735;Dbxref=GenBank:WP_016502637.1;Name=WP_016502637.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502637.1;locus_tag=D5F94_RS06735;product=adenosine deaminase;protein_id=WP_016502637.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 96360 96803 . + . ID=gene-D5F94_RS06740;Name=D5F94_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06740;old_locus_tag=D5F94_06740 NZ_QYTD01000008.1 Protein Homology CDS 96360 96803 . + 0 ID=cds-WP_001162138.1;Parent=gene-D5F94_RS06740;Dbxref=GenBank:WP_001162138.1;Name=WP_001162138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480489.1;locus_tag=D5F94_RS06740;product=flavodoxin;protein_id=WP_001162138.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 96880 97155 . + . ID=gene-D5F94_RS06745;Name=D5F94_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06745;old_locus_tag=D5F94_06745 NZ_QYTD01000008.1 Protein Homology CDS 96880 97155 . + 0 ID=cds-WP_000418127.1;Parent=gene-D5F94_RS06745;Dbxref=GenBank:WP_000418127.1;Name=WP_000418127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418127.1;locus_tag=D5F94_RS06745;product=chorismate mutase;protein_id=WP_000418127.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 97148 98344 . + . ID=gene-D5F94_RS06750;Name=D5F94_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06750;old_locus_tag=D5F94_06750 NZ_QYTD01000008.1 Protein Homology CDS 97148 98344 . + 0 ID=cds-WP_016502638.1;Parent=gene-D5F94_RS06750;Dbxref=GenBank:WP_016502638.1;Name=WP_016502638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595711.1;locus_tag=D5F94_RS06750;product=voltage-gated chloride channel family protein;protein_id=WP_016502638.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 98929 99276 . + . ID=gene-D5F94_RS06755;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=D5F94_RS06755;old_locus_tag=D5F94_06755 NZ_QYTD01000008.1 Protein Homology CDS 98929 99276 . + 0 ID=cds-WP_016502639.1;Parent=gene-D5F94_RS06755;Dbxref=GenBank:WP_016502639.1;Name=WP_016502639.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502639.1;locus_tag=D5F94_RS06755;product=50S ribosomal protein L19;protein_id=WP_016502639.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 99387 99458 . + . ID=gene-D5F94_RS06760;Name=D5F94_RS06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS06760;old_locus_tag=D5F94_06760 NZ_QYTD01000008.1 tRNAscan-SE tRNA 99387 99458 . + . ID=rna-D5F94_RS06760;Parent=gene-D5F94_RS06760;anticodon=(pos:99420..99422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06760;product=tRNA-Arg NZ_QYTD01000008.1 tRNAscan-SE exon 99387 99458 . + . ID=exon-D5F94_RS06760-1;Parent=rna-D5F94_RS06760;anticodon=(pos:99420..99422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS06760;product=tRNA-Arg NZ_QYTD01000008.1 RefSeq gene 99748 100953 . + . ID=gene-D5F94_RS06765;Name=D5F94_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06765;old_locus_tag=D5F94_06765 NZ_QYTD01000008.1 Protein Homology CDS 99748 100953 . + 0 ID=cds-WP_000078933.1;Parent=gene-D5F94_RS06765;Dbxref=GenBank:WP_000078933.1;Name=WP_000078933.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078928.1;locus_tag=D5F94_RS06765;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_000078933.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 101071 101631 . + . ID=gene-D5F94_RS06770;Name=D5F94_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06770;old_locus_tag=D5F94_06770 NZ_QYTD01000008.1 Protein Homology CDS 101071 101631 . + 0 ID=cds-WP_001106189.1;Parent=gene-D5F94_RS06770;Dbxref=GenBank:WP_001106189.1;Name=WP_001106189.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106189.1;locus_tag=D5F94_RS06770;product=HAD-IA family hydrolase;protein_id=WP_001106189.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 101632 103584 . + . ID=gene-D5F94_RS06775;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=D5F94_RS06775;old_locus_tag=D5F94_06775 NZ_QYTD01000008.1 Protein Homology CDS 101632 103584 . + 0 ID=cds-WP_016502640.1;Parent=gene-D5F94_RS06775;Dbxref=GenBank:WP_016502640.1;Name=WP_016502640.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002283665.1;locus_tag=D5F94_RS06775;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_016502640.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 103678 105402 . + . ID=gene-D5F94_RS06780;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=D5F94_RS06780;old_locus_tag=D5F94_06780 NZ_QYTD01000008.1 Protein Homology CDS 103678 105402 . + 0 ID=cds-WP_000094337.1;Parent=gene-D5F94_RS06780;Dbxref=GenBank:WP_000094337.1;Name=WP_000094337.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648073.1;locus_tag=D5F94_RS06780;product=septation ring formation regulator EzrA;protein_id=WP_000094337.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 105496 106137 . + . ID=gene-D5F94_RS06785;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=D5F94_RS06785;old_locus_tag=D5F94_06785 NZ_QYTD01000008.1 Protein Homology CDS 105496 106137 . + 0 ID=cds-WP_016502641.1;Parent=gene-D5F94_RS06785;Dbxref=GenBank:WP_016502641.1;Name=WP_016502641.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589687.1;locus_tag=D5F94_RS06785;product=phosphoserine phosphatase SerB;protein_id=WP_016502641.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 106158 106643 . - . ID=gene-D5F94_RS06790;Name=D5F94_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06790;old_locus_tag=D5F94_06790 NZ_QYTD01000008.1 Protein Homology CDS 106158 106643 . - 0 ID=cds-WP_000409124.1;Parent=gene-D5F94_RS06790;Dbxref=GenBank:WP_000409124.1;Name=WP_000409124.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000409123.1;locus_tag=D5F94_RS06790;product=NUDIX hydrolase;protein_id=WP_000409124.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 106656 107111 . - . ID=gene-D5F94_RS06795;Name=D5F94_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06795;old_locus_tag=D5F94_06795 NZ_QYTD01000008.1 Protein Homology CDS 106656 107111 . - 0 ID=cds-WP_016502642.1;Parent=gene-D5F94_RS06795;Dbxref=GenBank:WP_016502642.1;Name=WP_016502642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137375.1;locus_tag=D5F94_RS06795;product=YueI family protein;protein_id=WP_016502642.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 107309 108616 . + . ID=gene-D5F94_RS06800;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=D5F94_RS06800;old_locus_tag=D5F94_06800 NZ_QYTD01000008.1 Protein Homology CDS 107309 108616 . + 0 ID=cds-WP_000022832.1;Parent=gene-D5F94_RS06800;Dbxref=GenBank:WP_000022832.1;Name=WP_000022832.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=D5F94_RS06800;product=surface-displayed alpha-enolase;protein_id=WP_000022832.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 108724 109728 . - . ID=gene-D5F94_RS06805;Name=D5F94_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06805;old_locus_tag=D5F94_06805 NZ_QYTD01000008.1 Protein Homology CDS 108724 109728 . - 0 ID=cds-WP_124749478.1;Parent=gene-D5F94_RS06805;Dbxref=GenBank:WP_124749478.1;Name=WP_124749478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648393.1;locus_tag=D5F94_RS06805;product=DNA/RNA non-specific endonuclease;protein_id=WP_124749478.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 109957 111240 . + . ID=gene-D5F94_RS06810;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=D5F94_RS06810;old_locus_tag=D5F94_06810 NZ_QYTD01000008.1 Protein Homology CDS 109957 111240 . + 0 ID=cds-WP_124749480.1;Parent=gene-D5F94_RS06810;Dbxref=GenBank:WP_124749480.1;Name=WP_124749480.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772014.1;locus_tag=D5F94_RS06810;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_124749480.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 111233 111745 . + . ID=gene-D5F94_RS06815;Name=D5F94_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06815;old_locus_tag=D5F94_06815 NZ_QYTD01000008.1 Protein Homology CDS 111233 111745 . + 0 ID=cds-WP_001127189.1;Parent=gene-D5F94_RS06815;Dbxref=GenBank:WP_001127189.1;Name=WP_001127189.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127191.1;locus_tag=D5F94_RS06815;product=shikimate kinase;protein_id=WP_001127189.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 111802 113175 . + . ID=gene-D5F94_RS06820;Name=D5F94_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06820;old_locus_tag=D5F94_06820 NZ_QYTD01000008.1 Protein Homology CDS 111802 113175 . + 0 ID=cds-WP_016502647.1;Parent=gene-D5F94_RS06820;Dbxref=GenBank:WP_016502647.1;Name=WP_016502647.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089330.1;locus_tag=D5F94_RS06820;product=LCP family protein;protein_id=WP_016502647.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 113276 114631 . + . ID=gene-D5F94_RS06825;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=D5F94_RS06825;old_locus_tag=D5F94_06825 NZ_QYTD01000008.1 Protein Homology CDS 113276 114631 . + 0 ID=cds-WP_124749482.1;Parent=gene-D5F94_RS06825;Dbxref=GenBank:WP_124749482.1;Name=WP_124749482.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902645.1;locus_tag=D5F94_RS06825;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_124749482.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 115153 115671 . + . ID=gene-D5F94_RS06830;Name=D5F94_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06830;old_locus_tag=D5F94_06830 NZ_QYTD01000008.1 Protein Homology CDS 115153 115671 . + 0 ID=cds-WP_124749484.1;Parent=gene-D5F94_RS06830;Dbxref=GenBank:WP_124749484.1;Name=WP_124749484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013852041.1;locus_tag=D5F94_RS06830;product=ClbS/DfsB family four-helix bundle protein;protein_id=WP_124749484.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 115974 116504 . - . ID=gene-D5F94_RS06835;Name=D5F94_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06835;old_locus_tag=D5F94_06835 NZ_QYTD01000008.1 Protein Homology CDS 115974 116504 . - 0 ID=cds-WP_124749486.1;Parent=gene-D5F94_RS06835;Dbxref=GenBank:WP_124749486.1;Name=WP_124749486.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445921.1;locus_tag=D5F94_RS06835;product=TetR/AcrR family transcriptional regulator;protein_id=WP_124749486.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 116674 119532 . + . ID=gene-D5F94_RS06840;Name=D5F94_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06840;old_locus_tag=D5F94_06840 NZ_QYTD01000008.1 Protein Homology CDS 116674 119532 . + 0 ID=cds-WP_124749488.1;Parent=gene-D5F94_RS06840;Dbxref=GenBank:WP_124749488.1;Name=WP_124749488.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003082558.1;locus_tag=D5F94_RS06840;product=YSIRK-type signal peptide-containing protein;protein_id=WP_124749488.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 119965 120153 . + . ID=gene-D5F94_RS10725;Name=D5F94_RS10725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10725;old_locus_tag=D5F94_06845;partial=true;pseudo=true;start_range=.,119965 NZ_QYTD01000008.1 Protein Homology CDS 119965 120153 . + 0 ID=cds-D5F94_RS10725;Parent=gene-D5F94_RS10725;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740329.1;locus_tag=D5F94_RS10725;partial=true;product=hypothetical protein;pseudo=true;start_range=.,119965;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 120392 122260 . + . ID=gene-D5F94_RS06850;Name=D5F94_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06850;old_locus_tag=D5F94_06850 NZ_QYTD01000008.1 Protein Homology CDS 120392 122260 . + 0 ID=cds-WP_124749490.1;Parent=gene-D5F94_RS06850;Dbxref=GenBank:WP_124749490.1;Name=WP_124749490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459849.1;locus_tag=D5F94_RS06850;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_124749490.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 122669 123238 . + . ID=gene-D5F94_RS06855;Name=D5F94_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06855;old_locus_tag=D5F94_06855 NZ_QYTD01000008.1 Protein Homology CDS 122669 123238 . + 0 ID=cds-WP_001122250.1;Parent=gene-D5F94_RS06855;Dbxref=GenBank:WP_001122250.1;Name=WP_001122250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122248.1;locus_tag=D5F94_RS06855;product=hypothetical protein;protein_id=WP_001122250.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 123277 125232 . - . ID=gene-D5F94_RS06860;Name=D5F94_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06860;old_locus_tag=D5F94_06860 NZ_QYTD01000008.1 Protein Homology CDS 123277 125232 . - 0 ID=cds-WP_124749492.1;Parent=gene-D5F94_RS06860;Dbxref=GenBank:WP_124749492.1;Name=WP_124749492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769760.1;locus_tag=D5F94_RS06860;product=DNA polymerase;protein_id=WP_124749492.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 125282 125446 . - . ID=gene-D5F94_RS10550;Name=D5F94_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10550 NZ_QYTD01000008.1 Protein Homology CDS 125282 125446 . - 0 ID=cds-WP_000464240.1;Parent=gene-D5F94_RS10550;Dbxref=GenBank:WP_000464240.1;Name=WP_000464240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464240.1;locus_tag=D5F94_RS10550;product=hypothetical protein;protein_id=WP_000464240.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 125463 126026 . - . ID=gene-D5F94_RS06865;Name=D5F94_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06865;old_locus_tag=D5F94_06865 NZ_QYTD01000008.1 Protein Homology CDS 125463 126026 . - 0 ID=cds-WP_000208946.1;Parent=gene-D5F94_RS06865;Dbxref=GenBank:WP_000208946.1;Name=WP_000208946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208945.1;locus_tag=D5F94_RS06865;product=DUF2815 family protein;protein_id=WP_000208946.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 126031 127152 . - . ID=gene-D5F94_RS06870;Name=D5F94_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06870;old_locus_tag=D5F94_06870 NZ_QYTD01000008.1 Protein Homology CDS 126031 127152 . - 0 ID=cds-WP_001913444.1;Parent=gene-D5F94_RS06870;Dbxref=GenBank:WP_001913444.1;Name=WP_001913444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181333.1;locus_tag=D5F94_RS06870;product=DUF2800 domain-containing protein;protein_id=WP_001913444.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 127145 127468 . - . ID=gene-D5F94_RS06875;Name=D5F94_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06875;old_locus_tag=D5F94_06875 NZ_QYTD01000008.1 Protein Homology CDS 127145 127468 . - 0 ID=cds-WP_000041407.1;Parent=gene-D5F94_RS06875;Dbxref=GenBank:WP_000041407.1;Name=WP_000041407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077671.1;locus_tag=D5F94_RS06875;product=hypothetical protein;protein_id=WP_000041407.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 127443 127577 . - . ID=gene-D5F94_RS10635;Name=D5F94_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS10635 NZ_QYTD01000008.1 Protein Homology CDS 127443 127577 . - 0 ID=cds-WP_001262782.1;Parent=gene-D5F94_RS10635;Dbxref=GenBank:WP_001262782.1;Name=WP_001262782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262782.1;locus_tag=D5F94_RS10635;product=hypothetical protein;protein_id=WP_001262782.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 127865 130144 . + . ID=gene-D5F94_RS06880;Name=D5F94_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06880;old_locus_tag=D5F94_06880 NZ_QYTD01000008.1 Protein Homology CDS 127865 130144 . + 0 ID=cds-WP_124749494.1;Parent=gene-D5F94_RS06880;Dbxref=GenBank:WP_124749494.1;Name=WP_124749494.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768029.1;locus_tag=D5F94_RS06880;product=phage/plasmid primase%2C P4 family;protein_id=WP_124749494.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 130428 130709 . + . ID=gene-D5F94_RS06885;Name=D5F94_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06885;old_locus_tag=D5F94_06885 NZ_QYTD01000008.1 Protein Homology CDS 130428 130709 . + 0 ID=cds-WP_124749496.1;Parent=gene-D5F94_RS06885;Dbxref=GenBank:WP_124749496.1;Name=WP_124749496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208489.1;locus_tag=D5F94_RS06885;product=VRR-NUC domain-containing protein;protein_id=WP_124749496.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 130690 132066 . + . ID=gene-D5F94_RS06890;Name=D5F94_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06890;old_locus_tag=D5F94_06890 NZ_QYTD01000008.1 Protein Homology CDS 130690 132066 . + 0 ID=cds-WP_000768924.1;Parent=gene-D5F94_RS06890;Dbxref=GenBank:WP_000768924.1;Name=WP_000768924.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268649.1;locus_tag=D5F94_RS06890;product=SNF2-related protein;protein_id=WP_000768924.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 132059 132556 . + . ID=gene-D5F94_RS06895;Name=D5F94_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06895;old_locus_tag=D5F94_06895 NZ_QYTD01000008.1 Protein Homology CDS 132059 132556 . + 0 ID=cds-WP_000356300.1;Parent=gene-D5F94_RS06895;Dbxref=GenBank:WP_000356300.1;Name=WP_000356300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361944.1;locus_tag=D5F94_RS06895;product=hypothetical protein;protein_id=WP_000356300.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 132719 132901 . + . ID=gene-D5F94_RS06900;Name=D5F94_RS06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06900;old_locus_tag=D5F94_06900;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 132719 132901 . + 0 ID=cds-D5F94_RS06900;Parent=gene-D5F94_RS06900;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646674.1;locus_tag=D5F94_RS06900;product=DUF6900 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 132955 133992 . + . ID=gene-D5F94_RS06905;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=D5F94_RS06905;old_locus_tag=D5F94_06905 NZ_QYTD01000008.1 Protein Homology CDS 132955 133992 . + 0 ID=cds-WP_124749498.1;Parent=gene-D5F94_RS06905;Dbxref=GenBank:WP_124749498.1;Name=WP_124749498.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058380.1;locus_tag=D5F94_RS06905;product=methionine adenosyltransferase;protein_id=WP_124749498.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 133994 134359 . + . ID=gene-D5F94_RS06910;Name=D5F94_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06910;old_locus_tag=D5F94_06910 NZ_QYTD01000008.1 Protein Homology CDS 133994 134359 . + 0 ID=cds-WP_001138027.1;Parent=gene-D5F94_RS06910;Dbxref=GenBank:WP_001138027.1;Name=WP_001138027.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138031.1;locus_tag=D5F94_RS06910;product=HNH endonuclease;protein_id=WP_001138027.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 134679 135134 . + . ID=gene-D5F94_RS06915;Name=D5F94_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06915;old_locus_tag=D5F94_06915 NZ_QYTD01000008.1 Protein Homology CDS 134679 135134 . + 0 ID=cds-WP_000999418.1;Parent=gene-D5F94_RS06915;Dbxref=GenBank:WP_000999418.1;Name=WP_000999418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999419.1;locus_tag=D5F94_RS06915;product=hypothetical protein;protein_id=WP_000999418.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 135106 136362 . + . ID=gene-D5F94_RS06920;Name=D5F94_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06920;old_locus_tag=D5F94_06920 NZ_QYTD01000008.1 Protein Homology CDS 135106 136362 . + 0 ID=cds-WP_124749500.1;Parent=gene-D5F94_RS06920;Dbxref=GenBank:WP_124749500.1;Name=WP_124749500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211617.1;locus_tag=D5F94_RS06920;product=site-specific DNA-methyltransferase;protein_id=WP_124749500.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 136359 137613 . + . ID=gene-D5F94_RS06925;Name=D5F94_RS06925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS06925;old_locus_tag=D5F94_06925;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 136359 137613 . + 0 ID=cds-D5F94_RS06925;Parent=gene-D5F94_RS06925;Note=frameshifted;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176349.1;locus_tag=D5F94_RS06925;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 137691 137945 . + . ID=gene-D5F94_RS06930;Name=D5F94_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06930;old_locus_tag=D5F94_06930 NZ_QYTD01000008.1 Protein Homology CDS 137691 137945 . + 0 ID=cds-WP_124749502.1;Parent=gene-D5F94_RS06930;Dbxref=GenBank:WP_124749502.1;Name=WP_124749502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164537.1;locus_tag=D5F94_RS06930;product=hypothetical protein;protein_id=WP_124749502.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 137956 138405 . + . ID=gene-D5F94_RS06935;Name=D5F94_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06935;old_locus_tag=D5F94_06935 NZ_QYTD01000008.1 Protein Homology CDS 137956 138405 . + 0 ID=cds-WP_000342209.1;Parent=gene-D5F94_RS06935;Dbxref=GenBank:WP_000342209.1;Name=WP_000342209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342210.1;locus_tag=D5F94_RS06935;product=DUF4314 domain-containing protein;protein_id=WP_000342209.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 138457 138930 . + . ID=gene-D5F94_RS06940;Name=D5F94_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06940;old_locus_tag=D5F94_06940 NZ_QYTD01000008.1 Protein Homology CDS 138457 138930 . + 0 ID=cds-WP_000290862.1;Parent=gene-D5F94_RS06940;Dbxref=GenBank:WP_000290862.1;Name=WP_000290862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290865.1;locus_tag=D5F94_RS06940;product=phage terminase small subunit P27 family;protein_id=WP_000290862.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 138927 140519 . + . ID=gene-D5F94_RS06945;Name=D5F94_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06945;old_locus_tag=D5F94_06945 NZ_QYTD01000008.1 Protein Homology CDS 138927 140519 . + 0 ID=cds-WP_124749504.1;Parent=gene-D5F94_RS06945;Dbxref=GenBank:WP_124749504.1;Name=WP_124749504.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268711.1;locus_tag=D5F94_RS06945;product=terminase large subunit;protein_id=WP_124749504.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 140590 140847 . + . ID=gene-D5F94_RS06950;Name=D5F94_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06950;old_locus_tag=D5F94_06950 NZ_QYTD01000008.1 Protein Homology CDS 140590 140847 . + 0 ID=cds-WP_001166641.1;Parent=gene-D5F94_RS06950;Dbxref=GenBank:WP_001166641.1;Name=WP_001166641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166641.1;locus_tag=D5F94_RS06950;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001166641.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 140844 141215 . + . ID=gene-D5F94_RS06955;Name=D5F94_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06955;old_locus_tag=D5F94_06955 NZ_QYTD01000008.1 Protein Homology CDS 140844 141215 . + 0 ID=cds-WP_124749506.1;Parent=gene-D5F94_RS06955;Dbxref=GenBank:WP_124749506.1;Name=WP_124749506.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221831.1;locus_tag=D5F94_RS06955;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_124749506.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 141241 141567 . + . ID=gene-D5F94_RS06960;Name=D5F94_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06960;old_locus_tag=D5F94_06960 NZ_QYTD01000008.1 Protein Homology CDS 141241 141567 . + 0 ID=cds-WP_000149740.1;Parent=gene-D5F94_RS06960;Dbxref=GenBank:WP_000149740.1;Name=WP_000149740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149740.1;locus_tag=D5F94_RS06960;product=hypothetical protein;protein_id=WP_000149740.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 141635 142924 . + . ID=gene-D5F94_RS06965;Name=D5F94_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06965;old_locus_tag=D5F94_06965 NZ_QYTD01000008.1 Protein Homology CDS 141635 142924 . + 0 ID=cds-WP_124749508.1;Parent=gene-D5F94_RS06965;Dbxref=GenBank:WP_124749508.1;Name=WP_124749508.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648322.1;locus_tag=D5F94_RS06965;product=phage portal protein;protein_id=WP_124749508.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 142917 143615 . + . ID=gene-D5F94_RS06970;Name=D5F94_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06970;old_locus_tag=D5F94_06970 NZ_QYTD01000008.1 Protein Homology CDS 142917 143615 . + 0 ID=cds-WP_124749510.1;Parent=gene-D5F94_RS06970;Dbxref=GenBank:WP_124749510.1;Name=WP_124749510.1;Ontology_term=GO:0046797,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003084543.1;locus_tag=D5F94_RS06970;product=head maturation protease%2C ClpP-related;protein_id=WP_124749510.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 143629 144837 . + . ID=gene-D5F94_RS06975;Name=D5F94_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06975;old_locus_tag=D5F94_06975 NZ_QYTD01000008.1 Protein Homology CDS 143629 144837 . + 0 ID=cds-WP_124749512.1;Parent=gene-D5F94_RS06975;Dbxref=GenBank:WP_124749512.1;Name=WP_124749512.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646689.1;locus_tag=D5F94_RS06975;product=phage major capsid protein;protein_id=WP_124749512.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 144834 145091 . + . ID=gene-D5F94_RS06980;Name=D5F94_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06980;old_locus_tag=D5F94_06980 NZ_QYTD01000008.1 Protein Homology CDS 144834 145091 . + 0 ID=cds-WP_000988604.1;Parent=gene-D5F94_RS06980;Dbxref=GenBank:WP_000988604.1;Name=WP_000988604.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646690.1;locus_tag=D5F94_RS06980;product=head-tail connector protein;protein_id=WP_000988604.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 145091 145429 . + . ID=gene-D5F94_RS06985;Name=D5F94_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06985;old_locus_tag=D5F94_06985 NZ_QYTD01000008.1 Protein Homology CDS 145091 145429 . + 0 ID=cds-WP_124749514.1;Parent=gene-D5F94_RS06985;Dbxref=GenBank:WP_124749514.1;Name=WP_124749514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684963.1;locus_tag=D5F94_RS06985;product=head-tail adaptor protein;protein_id=WP_124749514.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 145422 145790 . + . ID=gene-D5F94_RS06990;Name=D5F94_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06990;old_locus_tag=D5F94_06990 NZ_QYTD01000008.1 Protein Homology CDS 145422 145790 . + 0 ID=cds-WP_000161247.1;Parent=gene-D5F94_RS06990;Dbxref=GenBank:WP_000161247.1;Name=WP_000161247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161242.1;locus_tag=D5F94_RS06990;product=HK97 gp10 family phage protein;protein_id=WP_000161247.1;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 145799 146125 . + . ID=gene-D5F94_RS06995;Name=D5F94_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS06995;old_locus_tag=D5F94_06995 NZ_QYTD01000008.1 Protein Homology CDS 145799 146125 . + 0 ID=cds-WP_001209972.1;Parent=gene-D5F94_RS06995;Dbxref=GenBank:WP_001209972.1;Name=WP_001209972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646693.1;locus_tag=D5F94_RS06995;product=hypothetical protein;protein_id=WP_001209972.1;transl_table=11 NZ_QYTD01000008.1 RefSeq pseudogene 146128 146409 . + . ID=gene-D5F94_RS07000;Name=D5F94_RS07000;end_range=146409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07000;old_locus_tag=D5F94_07000;partial=true;pseudo=true NZ_QYTD01000008.1 Protein Homology CDS 146128 146409 . + 0 ID=cds-D5F94_RS07000;Parent=gene-D5F94_RS07000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198;end_range=146409,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818561.1;locus_tag=D5F94_RS07000;partial=true;product=major tail protein;pseudo=true;transl_table=11 NZ_QYTD01000008.1 RefSeq gene 146444 146993 . - . ID=gene-D5F94_RS07005;Name=D5F94_RS07005;end_range=146993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07005;old_locus_tag=D5F94_07005;partial=true NZ_QYTD01000008.1 Protein Homology CDS 146444 146993 . - 1 ID=cds-WP_124749516.1;Parent=gene-D5F94_RS07005;Dbxref=GenBank:WP_124749516.1;Name=WP_124749516.1;Ontology_term=GO:0004803;end_range=146993,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612023.1;locus_tag=D5F94_RS07005;partial=true;product=IS3 family transposase;protein_id=WP_124749516.1;transl_table=11 ##sequence-region NZ_QYTD01000009.1 1 118181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1311 NZ_QYTD01000009.1 RefSeq region 1 118181 . + . ID=NZ_QYTD01000009.1:1..118181;Dbxref=taxon:1311;collected-by=ILRI;collection-date=2004;country=Kenya;gbkey=Src;genome=genomic;genotype=ST616;isolation-source=milk;mol_type=genomic DNA;nat-host=Camelus dromedarius;serotype=III;strain=ILRI027 NZ_QYTD01000009.1 RefSeq pseudogene 1 111 . - . ID=gene-D5F94_RS07010;Name=D5F94_RS07010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07010;old_locus_tag=D5F94_07010;partial=true;pseudo=true;start_range=.,1 NZ_QYTD01000009.1 Protein Homology CDS 1 111 . - 0 ID=cds-D5F94_RS07010;Parent=gene-D5F94_RS07010;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018958.1;locus_tag=D5F94_RS07010;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 200 277 . - . ID=gene-D5F94_RS10730;Name=D5F94_RS10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS10730;old_locus_tag=D5F94_07015;partial=true;pseudo=true;start_range=.,200 NZ_QYTD01000009.1 Protein Homology CDS 200 277 . - 0 ID=cds-D5F94_RS10730;Parent=gene-D5F94_RS10730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001873128.1;locus_tag=D5F94_RS10730;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,200;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 504 869 . - . ID=gene-D5F94_RS07020;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=D5F94_RS07020;old_locus_tag=D5F94_07020 NZ_QYTD01000009.1 Protein Homology CDS 504 869 . - 0 ID=cds-WP_001196973.1;Parent=gene-D5F94_RS07020;Dbxref=GenBank:WP_001196973.1;Name=WP_001196973.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=D5F94_RS07020;product=50S ribosomal protein L7/L12;protein_id=WP_001196973.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 933 1433 . - . ID=gene-D5F94_RS07025;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=D5F94_RS07025;old_locus_tag=D5F94_07025 NZ_QYTD01000009.1 Protein Homology CDS 933 1433 . - 0 ID=cds-WP_001287288.1;Parent=gene-D5F94_RS07025;Dbxref=GenBank:WP_001287288.1;Name=WP_001287288.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287287.1;locus_tag=D5F94_RS07025;product=50S ribosomal protein L10;protein_id=WP_001287288.1;transl_table=11 NZ_QYTD01000009.1 cmsearch sequence_feature 1463 1596 . - . ID=id-NZ_QYTD01000009.1:1463..1596;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTD01000009.1 RefSeq gene 1866 3974 . + . ID=gene-D5F94_RS07030;Name=D5F94_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07030;old_locus_tag=D5F94_07030 NZ_QYTD01000009.1 Protein Homology CDS 1866 3974 . + 0 ID=cds-WP_016502965.1;Parent=gene-D5F94_RS07030;Dbxref=GenBank:WP_016502965.1;Name=WP_016502965.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002818.1;locus_tag=D5F94_RS07030;product=AAA family ATPase;protein_id=WP_016502965.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 4068 5012 . - . ID=gene-D5F94_RS07035;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=D5F94_RS07035;old_locus_tag=D5F94_07035 NZ_QYTD01000009.1 Protein Homology CDS 4068 5012 . - 0 ID=cds-WP_016502966.1;Parent=gene-D5F94_RS07035;Dbxref=GenBank:WP_016502966.1;Name=WP_016502966.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532333.1;locus_tag=D5F94_RS07035;product=homocysteine S-methyltransferase;protein_id=WP_016502966.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 5017 6393 . - . ID=gene-D5F94_RS07040;Name=D5F94_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07040;old_locus_tag=D5F94_07040 NZ_QYTD01000009.1 Protein Homology CDS 5017 6393 . - 0 ID=cds-WP_000427484.1;Parent=gene-D5F94_RS07040;Dbxref=GenBank:WP_000427484.1;Name=WP_000427484.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058615.1;locus_tag=D5F94_RS07040;product=amino acid permease;protein_id=WP_000427484.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 6523 7171 . - . ID=gene-D5F94_RS07045;Name=D5F94_RS07045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07045;old_locus_tag=D5F94_07045;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 6523 7171 . - 0 ID=cds-D5F94_RS07045;Parent=gene-D5F94_RS07045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120088.1;locus_tag=D5F94_RS07045;product=HXXEE domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 7183 7833 . - . ID=gene-D5F94_RS07050;Name=D5F94_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07050;old_locus_tag=D5F94_07050 NZ_QYTD01000009.1 Protein Homology CDS 7183 7833 . - 0 ID=cds-WP_016502970.1;Parent=gene-D5F94_RS07050;Dbxref=GenBank:WP_016502970.1;Name=WP_016502970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645479.1;locus_tag=D5F94_RS07050;product=HXXEE domain-containing protein;protein_id=WP_016502970.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 7925 8473 . + . ID=gene-D5F94_RS07060;Name=D5F94_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07060;old_locus_tag=D5F94_07060 NZ_QYTD01000009.1 Protein Homology CDS 7925 8473 . + 0 ID=cds-WP_086163391.1;Parent=gene-D5F94_RS07060;Dbxref=GenBank:WP_086163391.1;Name=WP_086163391.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140659.1;locus_tag=D5F94_RS07060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_086163391.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 8535 9131 . - . ID=gene-D5F94_RS07065;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=D5F94_RS07065;old_locus_tag=D5F94_07065 NZ_QYTD01000009.1 Protein Homology CDS 8535 9131 . - 0 ID=cds-WP_000796925.1;Parent=gene-D5F94_RS07065;Dbxref=GenBank:WP_000796925.1;Name=WP_000796925.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796923.1;locus_tag=D5F94_RS07065;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000796925.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 9142 10368 . - . ID=gene-D5F94_RS07070;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=D5F94_RS07070;old_locus_tag=D5F94_07070 NZ_QYTD01000009.1 Protein Homology CDS 9142 10368 . - 0 ID=cds-WP_000918415.1;Parent=gene-D5F94_RS07070;Dbxref=GenBank:WP_000918415.1;Name=WP_000918415.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984948.1;locus_tag=D5F94_RS07070;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_000918415.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 10586 11080 . - . ID=gene-D5F94_RS07080;Name=D5F94_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07080;old_locus_tag=D5F94_07080 NZ_QYTD01000009.1 Protein Homology CDS 10586 11080 . - 0 ID=cds-WP_124749519.1;Parent=gene-D5F94_RS07080;Dbxref=GenBank:WP_124749519.1;Name=WP_124749519.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166044.1;locus_tag=D5F94_RS07080;product=dihydrofolate reductase;protein_id=WP_124749519.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 11160 11999 . - . ID=gene-D5F94_RS07085;Name=D5F94_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07085;old_locus_tag=D5F94_07085 NZ_QYTD01000009.1 Protein Homology CDS 11160 11999 . - 0 ID=cds-WP_000158595.1;Parent=gene-D5F94_RS07085;Dbxref=GenBank:WP_000158595.1;Name=WP_000158595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632084.1;locus_tag=D5F94_RS07085;product=thymidylate synthase;protein_id=WP_000158595.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 12153 13325 . + . ID=gene-D5F94_RS07090;Name=D5F94_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07090;old_locus_tag=D5F94_07090 NZ_QYTD01000009.1 Protein Homology CDS 12153 13325 . + 0 ID=cds-WP_001873466.1;Parent=gene-D5F94_RS07090;Dbxref=GenBank:WP_001873466.1;Name=WP_001873466.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001923259.1;locus_tag=D5F94_RS07090;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_001873466.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 13327 14610 . + . ID=gene-D5F94_RS07095;Name=D5F94_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07095;old_locus_tag=D5F94_07095 NZ_QYTD01000009.1 Protein Homology CDS 13327 14610 . + 0 ID=cds-WP_086163392.1;Parent=gene-D5F94_RS07095;Dbxref=GenBank:WP_086163392.1;Name=WP_086163392.1;Ontology_term=GO:0015936,GO:0004420,GO:0016616;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=coenzyme A metabolic process|0015936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647340.1;locus_tag=D5F94_RS07095;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_086163392.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 14702 15151 . + . ID=gene-D5F94_RS07100;Name=D5F94_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07100;old_locus_tag=D5F94_07100 NZ_QYTD01000009.1 Protein Homology CDS 14702 15151 . + 0 ID=cds-WP_016502975.1;Parent=gene-D5F94_RS07100;Dbxref=GenBank:WP_016502975.1;Name=WP_016502975.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039194.1;locus_tag=D5F94_RS07100;product=DUF1836 domain-containing protein;protein_id=WP_016502975.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 15144 15800 . + . ID=gene-D5F94_RS07105;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=D5F94_RS07105;old_locus_tag=D5F94_07105 NZ_QYTD01000009.1 Protein Homology CDS 15144 15800 . + 0 ID=cds-WP_000910676.1;Parent=gene-D5F94_RS07105;Dbxref=GenBank:WP_000910676.1;Name=WP_000910676.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000910676.1;locus_tag=D5F94_RS07105;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000910676.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 15887 16801 . + . ID=gene-D5F94_RS07110;Name=D5F94_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07110;old_locus_tag=D5F94_07110 NZ_QYTD01000009.1 Protein Homology CDS 15887 16801 . + 0 ID=cds-WP_016502976.1;Parent=gene-D5F94_RS07110;Dbxref=GenBank:WP_016502976.1;Name=WP_016502976.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646993.1;locus_tag=D5F94_RS07110;product=diacylglycerol/lipid kinase family protein;protein_id=WP_016502976.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 16902 17756 . + . ID=gene-D5F94_RS07115;Name=D5F94_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07115;old_locus_tag=D5F94_07115 NZ_QYTD01000009.1 Protein Homology CDS 16902 17756 . + 0 ID=cds-WP_086163393.1;Parent=gene-D5F94_RS07115;Dbxref=GenBank:WP_086163393.1;Name=WP_086163393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206687.1;locus_tag=D5F94_RS07115;product=glutathione S-transferase C-terminal domain-containing protein;protein_id=WP_086163393.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 17802 18020 . - . ID=gene-D5F94_RS07120;Name=D5F94_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07120;old_locus_tag=D5F94_07120 NZ_QYTD01000009.1 Protein Homology CDS 17802 18020 . - 0 ID=cds-WP_000594209.1;Parent=gene-D5F94_RS07120;Dbxref=GenBank:WP_000594209.1;Name=WP_000594209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594209.1;locus_tag=D5F94_RS07120;product=DUF4649 family protein;protein_id=WP_000594209.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 18088 19083 . - . ID=gene-D5F94_RS07125;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=D5F94_RS07125;old_locus_tag=D5F94_07125 NZ_QYTD01000009.1 Protein Homology CDS 18088 19083 . - 0 ID=cds-WP_016502978.1;Parent=gene-D5F94_RS07125;Dbxref=GenBank:WP_016502978.1;Name=WP_016502978.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184890.1;locus_tag=D5F94_RS07125;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_016502978.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 19080 20072 . - . ID=gene-D5F94_RS07130;Name=D5F94_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07130;old_locus_tag=D5F94_07130 NZ_QYTD01000009.1 Protein Homology CDS 19080 20072 . - 0 ID=cds-WP_000241525.1;Parent=gene-D5F94_RS07130;Dbxref=GenBank:WP_000241525.1;Name=WP_000241525.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241525.1;locus_tag=D5F94_RS07130;product=phosphomevalonate kinase;protein_id=WP_000241525.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 20065 21009 . - . ID=gene-D5F94_RS07135;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=D5F94_RS07135;old_locus_tag=D5F94_07135 NZ_QYTD01000009.1 Protein Homology CDS 20065 21009 . - 0 ID=cds-WP_124749521.1;Parent=gene-D5F94_RS07135;Dbxref=GenBank:WP_124749521.1;Name=WP_124749521.1;Ontology_term=GO:0019287,GO:0004163,GO:0005829;gbkey=CDS;gene=mvaD;go_component=cytosol|0005829||IEA;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348814.1;locus_tag=D5F94_RS07135;product=diphosphomevalonate decarboxylase;protein_id=WP_124749521.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 20991 21869 . - . ID=gene-D5F94_RS07140;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=D5F94_RS07140;old_locus_tag=D5F94_07140 NZ_QYTD01000009.1 Protein Homology CDS 20991 21869 . - 0 ID=cds-WP_000659719.1;Parent=gene-D5F94_RS07140;Dbxref=GenBank:WP_000659719.1;Name=WP_000659719.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000659716.1;locus_tag=D5F94_RS07140;product=mevalonate kinase;protein_id=WP_000659719.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 21985 23214 . - . ID=gene-D5F94_RS07145;Name=D5F94_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07145;old_locus_tag=D5F94_07145 NZ_QYTD01000009.1 Protein Homology CDS 21985 23214 . - 0 ID=cds-WP_000489523.1;Parent=gene-D5F94_RS07145;Dbxref=GenBank:WP_000489523.1;Name=WP_000489523.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489520.1;locus_tag=D5F94_RS07145;product=sensor histidine kinase;protein_id=WP_000489523.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 23214 23900 . - . ID=gene-D5F94_RS07150;Name=D5F94_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07150;old_locus_tag=D5F94_07150 NZ_QYTD01000009.1 Protein Homology CDS 23214 23900 . - 0 ID=cds-WP_001264420.1;Parent=gene-D5F94_RS07150;Dbxref=GenBank:WP_001264420.1;Name=WP_001264420.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632090.1;locus_tag=D5F94_RS07150;product=response regulator transcription factor;protein_id=WP_001264420.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 23902 24528 . - . ID=gene-D5F94_RS07155;Name=D5F94_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07155;old_locus_tag=D5F94_07155 NZ_QYTD01000009.1 Protein Homology CDS 23902 24528 . - 0 ID=cds-WP_000449636.1;Parent=gene-D5F94_RS07155;Dbxref=GenBank:WP_000449636.1;Name=WP_000449636.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449638.1;locus_tag=D5F94_RS07155;product=GTP pyrophosphokinase;protein_id=WP_000449636.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 24636 26390 . - . ID=gene-D5F94_RS07160;Name=D5F94_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07160;old_locus_tag=D5F94_07160 NZ_QYTD01000009.1 Protein Homology CDS 24636 26390 . - 0 ID=cds-WP_086163394.1;Parent=gene-D5F94_RS07160;Dbxref=GenBank:WP_086163394.1;Name=WP_086163394.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000851082.1;locus_tag=D5F94_RS07160;product=ABC transporter ATP-binding protein;protein_id=WP_086163394.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 26380 28197 . - . ID=gene-D5F94_RS07165;Name=D5F94_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07165;old_locus_tag=D5F94_07165 NZ_QYTD01000009.1 Protein Homology CDS 26380 28197 . - 0 ID=cds-WP_016502983.1;Parent=gene-D5F94_RS07165;Dbxref=GenBank:WP_016502983.1;Name=WP_016502983.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481821.1;locus_tag=D5F94_RS07165;product=ABC transporter ATP-binding protein;protein_id=WP_016502983.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 28244 28684 . - . ID=gene-D5F94_RS07170;Name=D5F94_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07170;old_locus_tag=D5F94_07170 NZ_QYTD01000009.1 Protein Homology CDS 28244 28684 . - 0 ID=cds-WP_000431168.1;Parent=gene-D5F94_RS07170;Dbxref=GenBank:WP_000431168.1;Name=WP_000431168.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771881.1;locus_tag=D5F94_RS07170;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000431168.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 28953 31025 . + . ID=gene-D5F94_RS07175;Name=D5F94_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07175;old_locus_tag=D5F94_07175 NZ_QYTD01000009.1 Protein Homology CDS 28953 31025 . + 0 ID=cds-WP_086163395.1;Parent=gene-D5F94_RS07175;Dbxref=GenBank:WP_086163395.1;Name=WP_086163395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650655.1;locus_tag=D5F94_RS07175;product=surface-anchored 5'-nucleotidase;protein_id=WP_086163395.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 31062 31472 . - . ID=gene-D5F94_RS07180;Name=D5F94_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07180;old_locus_tag=D5F94_07180 NZ_QYTD01000009.1 Protein Homology CDS 31062 31472 . - 0 ID=cds-WP_016502986.1;Parent=gene-D5F94_RS07180;Dbxref=GenBank:WP_016502986.1;Name=WP_016502986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502986.1;locus_tag=D5F94_RS07180;product=peptide deformylase;protein_id=WP_016502986.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 31542 32891 . - . ID=gene-D5F94_RS07185;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=D5F94_RS07185;old_locus_tag=D5F94_07185 NZ_QYTD01000009.1 Protein Homology CDS 31542 32891 . - 0 ID=cds-WP_086163396.1;Parent=gene-D5F94_RS07185;Dbxref=GenBank:WP_086163396.1;Name=WP_086163396.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647818.1;locus_tag=D5F94_RS07185;product=NADP-specific glutamate dehydrogenase;protein_id=WP_086163396.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 33059 33568 . + . ID=gene-D5F94_RS07190;Name=D5F94_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07190;old_locus_tag=D5F94_07190 NZ_QYTD01000009.1 Protein Homology CDS 33059 33568 . + 0 ID=cds-WP_016502988.1;Parent=gene-D5F94_RS07190;Dbxref=GenBank:WP_016502988.1;Name=WP_016502988.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771981.1;locus_tag=D5F94_RS07190;product=HdeD family acid-resistance protein;protein_id=WP_016502988.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 33609 35378 . - . ID=gene-D5F94_RS07195;Name=D5F94_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07195;old_locus_tag=D5F94_07195 NZ_QYTD01000009.1 Protein Homology CDS 33609 35378 . - 0 ID=cds-WP_016502989.1;Parent=gene-D5F94_RS07195;Dbxref=GenBank:WP_016502989.1;Name=WP_016502989.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480963.1;locus_tag=D5F94_RS07195;product=ABC transporter ATP-binding protein;protein_id=WP_016502989.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 35383 37122 . - . ID=gene-D5F94_RS07200;Name=D5F94_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07200;old_locus_tag=D5F94_07200 NZ_QYTD01000009.1 Protein Homology CDS 35383 37122 . - 0 ID=cds-WP_086163397.1;Parent=gene-D5F94_RS07200;Dbxref=GenBank:WP_086163397.1;Name=WP_086163397.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480964.1;locus_tag=D5F94_RS07200;product=ABC transporter ATP-binding protein;protein_id=WP_086163397.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 37189 37662 . - . ID=gene-D5F94_RS07205;Name=D5F94_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07205;old_locus_tag=D5F94_07205 NZ_QYTD01000009.1 Protein Homology CDS 37189 37662 . - 0 ID=cds-WP_000586888.1;Parent=gene-D5F94_RS07205;Dbxref=GenBank:WP_000586888.1;Name=WP_000586888.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502992.1;locus_tag=D5F94_RS07205;product=GNAT family N-acetyltransferase;protein_id=WP_000586888.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 37659 39527 . - . ID=gene-D5F94_RS07210;Name=D5F94_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07210;old_locus_tag=D5F94_07210 NZ_QYTD01000009.1 Protein Homology CDS 37659 39527 . - 0 ID=cds-WP_016502993.1;Parent=gene-D5F94_RS07210;Dbxref=GenBank:WP_016502993.1;Name=WP_016502993.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649433.1;locus_tag=D5F94_RS07210;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_016502993.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 39538 40746 . - . ID=gene-D5F94_RS07215;Name=D5F94_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07215;old_locus_tag=D5F94_07215 NZ_QYTD01000009.1 Protein Homology CDS 39538 40746 . - 0 ID=cds-WP_001238954.1;Parent=gene-D5F94_RS07215;Dbxref=GenBank:WP_001238954.1;Name=WP_001238954.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285349.1;locus_tag=D5F94_RS07215;product=CCA tRNA nucleotidyltransferase;protein_id=WP_001238954.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 40931 41779 . - . ID=gene-D5F94_RS07220;Name=D5F94_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07220;old_locus_tag=D5F94_07220 NZ_QYTD01000009.1 Protein Homology CDS 40931 41779 . - 0 ID=cds-WP_086163398.1;Parent=gene-D5F94_RS07220;Dbxref=GenBank:WP_086163398.1;Name=WP_086163398.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058626.1;locus_tag=D5F94_RS07220;product=DegV family protein;protein_id=WP_086163398.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 41779 42159 . - . ID=gene-D5F94_RS07225;Name=D5F94_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07225;old_locus_tag=D5F94_07225 NZ_QYTD01000009.1 Protein Homology CDS 41779 42159 . - 0 ID=cds-WP_000452063.1;Parent=gene-D5F94_RS07225;Dbxref=GenBank:WP_000452063.1;Name=WP_000452063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452064.1;locus_tag=D5F94_RS07225;product=DUF1149 family protein;protein_id=WP_000452063.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 42231 42764 . - . ID=gene-D5F94_RS07230;Name=D5F94_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07230;old_locus_tag=D5F94_07230 NZ_QYTD01000009.1 Protein Homology CDS 42231 42764 . - 0 ID=cds-WP_016502994.1;Parent=gene-D5F94_RS07230;Dbxref=GenBank:WP_016502994.1;Name=WP_016502994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178080.1;locus_tag=D5F94_RS07230;product=hypothetical protein;protein_id=WP_016502994.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 42815 43309 . - . ID=gene-D5F94_RS07235;Name=D5F94_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07235;old_locus_tag=D5F94_07235 NZ_QYTD01000009.1 Protein Homology CDS 42815 43309 . - 0 ID=cds-WP_000598909.1;Parent=gene-D5F94_RS07235;Dbxref=GenBank:WP_000598909.1;Name=WP_000598909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598905.1;locus_tag=D5F94_RS07235;product=DUF2127 domain-containing protein;protein_id=WP_000598909.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 43498 45462 . - . ID=gene-D5F94_RS07240;Name=D5F94_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07240;old_locus_tag=D5F94_07240 NZ_QYTD01000009.1 Protein Homology CDS 43498 45462 . - 0 ID=cds-WP_124749151.1;Parent=gene-D5F94_RS07240;Dbxref=GenBank:WP_124749151.1;Name=WP_124749151.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771056.1;locus_tag=D5F94_RS07240;product=PTS fructose transporter subunit IIABC;protein_id=WP_124749151.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 45459 46370 . - . ID=gene-D5F94_RS07245;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=D5F94_RS07245;old_locus_tag=D5F94_07245 NZ_QYTD01000009.1 Protein Homology CDS 45459 46370 . - 0 ID=cds-WP_000640762.1;Parent=gene-D5F94_RS07245;Dbxref=GenBank:WP_000640762.1;Name=WP_000640762.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017284863.1;locus_tag=D5F94_RS07245;product=1-phosphofructokinase;protein_id=WP_000640762.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 46367 47111 . - . ID=gene-D5F94_RS07250;Name=D5F94_RS07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07250;old_locus_tag=D5F94_07250;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 46367 47111 . - 0 ID=cds-D5F94_RS07250;Parent=gene-D5F94_RS07250;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920251.1;locus_tag=D5F94_RS07250;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 47242 48477 . - . ID=gene-D5F94_RS07255;Name=D5F94_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07255;old_locus_tag=D5F94_07255 NZ_QYTD01000009.1 Protein Homology CDS 47242 48477 . - 0 ID=cds-WP_124749523.1;Parent=gene-D5F94_RS07255;Dbxref=GenBank:WP_124749523.1;Name=WP_124749523.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175197.1;locus_tag=D5F94_RS07255;product=aminoacyltransferase;protein_id=WP_124749523.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 48621 50255 . - . ID=gene-D5F94_RS07260;Name=D5F94_RS07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07260;old_locus_tag=D5F94_07260;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 48621 50255 . - 0 ID=cds-D5F94_RS07260;Parent=gene-D5F94_RS07260;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976031.1;locus_tag=D5F94_RS07260;product=SH3 domain-containing protein;pseudo=true;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 50467 51390 . - . ID=gene-D5F94_RS07265;Name=D5F94_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07265;old_locus_tag=D5F94_07265 NZ_QYTD01000009.1 Protein Homology CDS 50467 51390 . - 0 ID=cds-WP_000964162.1;Parent=gene-D5F94_RS07265;Dbxref=GenBank:WP_000964162.1;Name=WP_000964162.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964166.1;locus_tag=D5F94_RS07265;product=2-dehydropantoate 2-reductase;protein_id=WP_000964162.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 51403 52473 . - . ID=gene-D5F94_RS07270;Name=D5F94_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07270;old_locus_tag=D5F94_07270 NZ_QYTD01000009.1 Protein Homology CDS 51403 52473 . - 0 ID=cds-WP_000185919.1;Parent=gene-D5F94_RS07270;Dbxref=GenBank:WP_000185919.1;Name=WP_000185919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185923.1;locus_tag=D5F94_RS07270;product=PTS sugar transporter subunit IIC;protein_id=WP_000185919.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 52610 53602 . - . ID=gene-D5F94_RS07275;Name=D5F94_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07275;old_locus_tag=D5F94_07275 NZ_QYTD01000009.1 Protein Homology CDS 52610 53602 . - 0 ID=cds-WP_016503002.1;Parent=gene-D5F94_RS07275;Dbxref=GenBank:WP_016503002.1;Name=WP_016503002.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017285367.1;locus_tag=D5F94_RS07275;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016503002.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 53583 54338 . - . ID=gene-D5F94_RS07280;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=D5F94_RS07280;old_locus_tag=D5F94_07280 NZ_QYTD01000009.1 Protein Homology CDS 53583 54338 . - 0 ID=cds-WP_000975542.1;Parent=gene-D5F94_RS07280;Dbxref=GenBank:WP_000975542.1;Name=WP_000975542.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647815.1;locus_tag=D5F94_RS07280;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000975542.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 54325 54843 . - . ID=gene-D5F94_RS07285;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=D5F94_RS07285;old_locus_tag=D5F94_07285 NZ_QYTD01000009.1 Protein Homology CDS 54325 54843 . - 0 ID=cds-WP_000455623.1;Parent=gene-D5F94_RS07285;Dbxref=GenBank:WP_000455623.1;Name=WP_000455623.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465641.1;locus_tag=D5F94_RS07285;product=ribosome maturation factor RimM;protein_id=WP_000455623.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 54906 54977 . - . ID=gene-D5F94_RS07290;Name=D5F94_RS07290;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS07290;old_locus_tag=D5F94_07290 NZ_QYTD01000009.1 tRNAscan-SE tRNA 54906 54977 . - . ID=rna-D5F94_RS07290;Parent=gene-D5F94_RS07290;anticodon=(pos:complement(54942..54944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07290;product=tRNA-Glu NZ_QYTD01000009.1 tRNAscan-SE exon 54906 54977 . - . ID=exon-D5F94_RS07290-1;Parent=rna-D5F94_RS07290;anticodon=(pos:complement(54942..54944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07290;product=tRNA-Glu NZ_QYTD01000009.1 RefSeq gene 54986 55057 . - . ID=gene-D5F94_RS07295;Name=D5F94_RS07295;gbkey=Gene;gene_biotype=tRNA;locus_tag=D5F94_RS07295;old_locus_tag=D5F94_07295 NZ_QYTD01000009.1 tRNAscan-SE tRNA 54986 55057 . - . ID=rna-D5F94_RS07295;Parent=gene-D5F94_RS07295;anticodon=(pos:complement(55023..55025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07295;product=tRNA-Gln NZ_QYTD01000009.1 tRNAscan-SE exon 54986 55057 . - . ID=exon-D5F94_RS07295-1;Parent=rna-D5F94_RS07295;anticodon=(pos:complement(55023..55025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=D5F94_RS07295;product=tRNA-Gln NZ_QYTD01000009.1 RefSeq gene 55165 56676 . - . ID=gene-D5F94_RS07300;Name=D5F94_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07300;old_locus_tag=D5F94_07300 NZ_QYTD01000009.1 Protein Homology CDS 55165 56676 . - 0 ID=cds-WP_000895678.1;Parent=gene-D5F94_RS07300;Dbxref=GenBank:WP_000895678.1;Name=WP_000895678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771680.1;locus_tag=D5F94_RS07300;product=M protein trans-acting positive regulator PRD domain-containing protein;protein_id=WP_000895678.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 56808 57050 . - . ID=gene-D5F94_RS07305;Name=D5F94_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07305;old_locus_tag=D5F94_07305 NZ_QYTD01000009.1 Protein Homology CDS 56808 57050 . - 0 ID=cds-WP_000379626.1;Parent=gene-D5F94_RS07305;Dbxref=GenBank:WP_000379626.1;Name=WP_000379626.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379626.1;locus_tag=D5F94_RS07305;product=KH domain-containing protein;protein_id=WP_000379626.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 57060 57332 . - . ID=gene-D5F94_RS07310;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=D5F94_RS07310;old_locus_tag=D5F94_07310 NZ_QYTD01000009.1 Protein Homology CDS 57060 57332 . - 0 ID=cds-WP_000268757.1;Parent=gene-D5F94_RS07310;Dbxref=GenBank:WP_000268757.1;Name=WP_000268757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=D5F94_RS07310;product=30S ribosomal protein S16;protein_id=WP_000268757.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 57461 58708 . - . ID=gene-D5F94_RS07315;Name=D5F94_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07315;old_locus_tag=D5F94_07315 NZ_QYTD01000009.1 Protein Homology CDS 57461 58708 . - 0 ID=cds-WP_000432854.1;Parent=gene-D5F94_RS07315;Dbxref=GenBank:WP_000432854.1;Name=WP_000432854.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432854.1;locus_tag=D5F94_RS07315;product=ABC transporter permease;protein_id=WP_000432854.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 58723 59433 . - . ID=gene-D5F94_RS07320;Name=D5F94_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07320;old_locus_tag=D5F94_07320 NZ_QYTD01000009.1 Protein Homology CDS 58723 59433 . - 0 ID=cds-WP_016503006.1;Parent=gene-D5F94_RS07320;Dbxref=GenBank:WP_016503006.1;Name=WP_016503006.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210672.1;locus_tag=D5F94_RS07320;product=ABC transporter ATP-binding protein;protein_id=WP_016503006.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 59436 60680 . - . ID=gene-D5F94_RS07325;Name=D5F94_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07325;old_locus_tag=D5F94_07325 NZ_QYTD01000009.1 Protein Homology CDS 59436 60680 . - 0 ID=cds-WP_016503007.1;Parent=gene-D5F94_RS07325;Dbxref=GenBank:WP_016503007.1;Name=WP_016503007.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058633.1;locus_tag=D5F94_RS07325;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_016503007.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 60889 62487 . - . ID=gene-D5F94_RS07330;Name=D5F94_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07330;old_locus_tag=D5F94_07330 NZ_QYTD01000009.1 Protein Homology CDS 60889 62487 . - 0 ID=cds-WP_086163401.1;Parent=gene-D5F94_RS07330;Dbxref=GenBank:WP_086163401.1;Name=WP_086163401.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771827.1;locus_tag=D5F94_RS07330;product=ATP-binding protein;protein_id=WP_086163401.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 62543 63613 . - . ID=gene-D5F94_RS07335;Name=D5F94_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07335;old_locus_tag=D5F94_07335 NZ_QYTD01000009.1 Protein Homology CDS 62543 63613 . - 0 ID=cds-WP_001085243.1;Parent=gene-D5F94_RS07335;Dbxref=GenBank:WP_001085243.1;Name=WP_001085243.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480977.1;locus_tag=D5F94_RS07335;product=carbamoyl phosphate synthase small subunit;protein_id=WP_001085243.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 63662 64183 . - . ID=gene-D5F94_RS07340;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=D5F94_RS07340;old_locus_tag=D5F94_07340 NZ_QYTD01000009.1 Protein Homology CDS 63662 64183 . - 0 ID=cds-WP_000823056.1;Parent=gene-D5F94_RS07340;Dbxref=GenBank:WP_000823056.1;Name=WP_000823056.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823056.1;locus_tag=D5F94_RS07340;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_000823056.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 64359 65252 . - . ID=gene-D5F94_RS07345;Name=D5F94_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07345;old_locus_tag=D5F94_07345 NZ_QYTD01000009.1 Protein Homology CDS 64359 65252 . - 0 ID=cds-WP_124749525.1;Parent=gene-D5F94_RS07345;Dbxref=GenBank:WP_124749525.1;Name=WP_124749525.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406595.1;locus_tag=D5F94_RS07345;product=RluA family pseudouridine synthase;protein_id=WP_124749525.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 65236 65700 . - . ID=gene-D5F94_RS07350;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=D5F94_RS07350;old_locus_tag=D5F94_07350 NZ_QYTD01000009.1 Protein Homology CDS 65236 65700 . - 0 ID=cds-WP_001226253.1;Parent=gene-D5F94_RS07350;Dbxref=GenBank:WP_001226253.1;Name=WP_001226253.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226252.1;locus_tag=D5F94_RS07350;product=signal peptidase II;protein_id=WP_001226253.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 65709 66614 . - . ID=gene-D5F94_RS07355;Name=D5F94_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07355;old_locus_tag=D5F94_07355 NZ_QYTD01000009.1 Protein Homology CDS 65709 66614 . - 0 ID=cds-WP_001025683.1;Parent=gene-D5F94_RS07355;Dbxref=GenBank:WP_001025683.1;Name=WP_001025683.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646939.1;locus_tag=D5F94_RS07355;product=LysR family transcriptional regulator;protein_id=WP_001025683.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 66830 67123 . - . ID=gene-D5F94_RS07360;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=D5F94_RS07360;old_locus_tag=D5F94_07360 NZ_QYTD01000009.1 Protein Homology CDS 66830 67123 . - 0 ID=cds-WP_000916503.1;Parent=gene-D5F94_RS07360;Dbxref=GenBank:WP_000916503.1;Name=WP_000916503.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=D5F94_RS07360;product=50S ribosomal protein L27;protein_id=WP_000916503.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 67145 67483 . - . ID=gene-D5F94_RS07365;Name=D5F94_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07365;old_locus_tag=D5F94_07365 NZ_QYTD01000009.1 Protein Homology CDS 67145 67483 . - 0 ID=cds-WP_000588480.1;Parent=gene-D5F94_RS07365;Dbxref=GenBank:WP_000588480.1;Name=WP_000588480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588481.1;locus_tag=D5F94_RS07365;product=ribosomal-processing cysteine protease Prp;protein_id=WP_000588480.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 67490 67804 . - . ID=gene-D5F94_RS07370;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=D5F94_RS07370;old_locus_tag=D5F94_07370 NZ_QYTD01000009.1 Protein Homology CDS 67490 67804 . - 0 ID=cds-WP_000109135.1;Parent=gene-D5F94_RS07370;Dbxref=GenBank:WP_000109135.1;Name=WP_000109135.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=D5F94_RS07370;product=50S ribosomal protein L21;protein_id=WP_000109135.1;transl_table=11 NZ_QYTD01000009.1 cmsearch sequence_feature 67839 67918 . - . ID=id-NZ_QYTD01000009.1:67839..67918;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTD01000009.1 RefSeq gene 67994 69172 . - . ID=gene-D5F94_RS07375;Name=D5F94_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07375;old_locus_tag=D5F94_07375 NZ_QYTD01000009.1 Protein Homology CDS 67994 69172 . - 0 ID=cds-WP_000101227.1;Parent=gene-D5F94_RS07375;Dbxref=GenBank:WP_000101227.1;Name=WP_000101227.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101234.1;locus_tag=D5F94_RS07375;product=CapA family protein;protein_id=WP_000101227.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 69274 70488 . - . ID=gene-D5F94_RS07380;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=D5F94_RS07380;old_locus_tag=D5F94_07380 NZ_QYTD01000009.1 Protein Homology CDS 69274 70488 . - 0 ID=cds-WP_001200110.1;Parent=gene-D5F94_RS07380;Dbxref=GenBank:WP_001200110.1;Name=WP_001200110.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200101.1;locus_tag=D5F94_RS07380;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_001200110.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 70490 71635 . - . ID=gene-D5F94_RS07385;Name=D5F94_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07385;old_locus_tag=D5F94_07385 NZ_QYTD01000009.1 Protein Homology CDS 70490 71635 . - 0 ID=cds-WP_016503012.1;Parent=gene-D5F94_RS07385;Dbxref=GenBank:WP_016503012.1;Name=WP_016503012.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000638894.1;locus_tag=D5F94_RS07385;product=cysteine desulfurase family protein;protein_id=WP_016503012.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 71887 72339 . + . ID=gene-D5F94_RS07390;Name=D5F94_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07390;old_locus_tag=D5F94_07390 NZ_QYTD01000009.1 Protein Homology CDS 71887 72339 . + 0 ID=cds-WP_000033716.1;Parent=gene-D5F94_RS07390;Dbxref=GenBank:WP_000033716.1;Name=WP_000033716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033712.1;locus_tag=D5F94_RS07390;product=DUF6556 family protein;protein_id=WP_000033716.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 72382 73731 . - . ID=gene-D5F94_RS07395;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=D5F94_RS07395;old_locus_tag=D5F94_07395 NZ_QYTD01000009.1 Protein Homology CDS 72382 73731 . - 0 ID=cds-WP_016503013.1;Parent=gene-D5F94_RS07395;Dbxref=GenBank:WP_016503013.1;Name=WP_016503013.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632110.1;locus_tag=D5F94_RS07395;product=glutathione-disulfide reductase;protein_id=WP_016503013.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 73906 74241 . - . ID=gene-D5F94_RS07400;Name=D5F94_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07400;old_locus_tag=D5F94_07400 NZ_QYTD01000009.1 Protein Homology CDS 73906 74241 . - 0 ID=cds-WP_000024627.1;Parent=gene-D5F94_RS07400;Dbxref=GenBank:WP_000024627.1;Name=WP_000024627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024621.1;locus_tag=D5F94_RS07400;product=YlbF/YmcA family competence regulator;protein_id=WP_000024627.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 74325 75491 . - . ID=gene-D5F94_RS07405;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=D5F94_RS07405;old_locus_tag=D5F94_07405 NZ_QYTD01000009.1 Protein Homology CDS 74325 75491 . - 0 ID=cds-WP_016503014.1;Parent=gene-D5F94_RS07405;Dbxref=GenBank:WP_016503014.1;Name=WP_016503014.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503014.1;locus_tag=D5F94_RS07405;product=chorismate synthase;protein_id=WP_016503014.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 75492 76559 . - . ID=gene-D5F94_RS07410;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=D5F94_RS07410;old_locus_tag=D5F94_07410 NZ_QYTD01000009.1 Protein Homology CDS 75492 76559 . - 0 ID=cds-WP_016503015.1;Parent=gene-D5F94_RS07410;Dbxref=GenBank:WP_016503015.1;Name=WP_016503015.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195728.1;locus_tag=D5F94_RS07410;product=3-dehydroquinate synthase;protein_id=WP_016503015.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 76653 77330 . - . ID=gene-D5F94_RS07415;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=D5F94_RS07415;old_locus_tag=D5F94_07415 NZ_QYTD01000009.1 Protein Homology CDS 76653 77330 . - 0 ID=cds-WP_000707048.1;Parent=gene-D5F94_RS07415;Dbxref=GenBank:WP_000707048.1;Name=WP_000707048.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767486.1;locus_tag=D5F94_RS07415;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000707048.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 77330 78466 . - . ID=gene-D5F94_RS07420;Name=D5F94_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07420;old_locus_tag=D5F94_07420 NZ_QYTD01000009.1 Protein Homology CDS 77330 78466 . - 0 ID=cds-WP_124749527.1;Parent=gene-D5F94_RS07420;Dbxref=GenBank:WP_124749527.1;Name=WP_124749527.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037602.1;locus_tag=D5F94_RS07420;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_124749527.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 78601 80745 . + . ID=gene-D5F94_RS07425;Name=D5F94_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07425;old_locus_tag=D5F94_07425 NZ_QYTD01000009.1 Protein Homology CDS 78601 80745 . + 0 ID=cds-WP_016503017.1;Parent=gene-D5F94_RS07425;Dbxref=GenBank:WP_016503017.1;Name=WP_016503017.1;Ontology_term=GO:0070395;gbkey=CDS;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768074.1;locus_tag=D5F94_RS07425;product=LTA synthase family protein;protein_id=WP_016503017.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 80987 81346 . - . ID=gene-D5F94_RS07430;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=D5F94_RS07430;old_locus_tag=D5F94_07430 NZ_QYTD01000009.1 Protein Homology CDS 80987 81346 . - 0 ID=cds-WP_000124839.1;Parent=gene-D5F94_RS07430;Dbxref=GenBank:WP_000124839.1;Name=WP_000124839.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=D5F94_RS07430;product=50S ribosomal protein L20;protein_id=WP_000124839.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 81404 81604 . - . ID=gene-D5F94_RS07435;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=D5F94_RS07435;old_locus_tag=D5F94_07435 NZ_QYTD01000009.1 Protein Homology CDS 81404 81604 . - 0 ID=cds-WP_001125940.1;Parent=gene-D5F94_RS07435;Dbxref=GenBank:WP_001125940.1;Name=WP_001125940.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=D5F94_RS07435;product=50S ribosomal protein L35;protein_id=WP_001125940.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 81644 82174 . - . ID=gene-D5F94_RS07440;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=D5F94_RS07440;old_locus_tag=D5F94_07440 NZ_QYTD01000009.1 Protein Homology CDS 81644 82174 . - 0 ID=cds-WP_000691023.1;Parent=gene-D5F94_RS07440;Dbxref=GenBank:WP_000691023.1;Name=WP_000691023.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011226065.1;locus_tag=D5F94_RS07440;product=translation initiation factor IF-3;protein_id=WP_000691023.1;transl_table=11 NZ_QYTD01000009.1 cmsearch sequence_feature 82189 82314 . - . ID=id-NZ_QYTD01000009.1:82189..82314;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_QYTD01000009.1 RefSeq gene 82335 83018 . - . ID=gene-D5F94_RS07445;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=D5F94_RS07445;old_locus_tag=D5F94_07445 NZ_QYTD01000009.1 Protein Homology CDS 82335 83018 . - 0 ID=cds-WP_001084720.1;Parent=gene-D5F94_RS07445;Dbxref=GenBank:WP_001084720.1;Name=WP_001084720.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771740.1;locus_tag=D5F94_RS07445;product=(d)CMP kinase;protein_id=WP_001084720.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 83029 83554 . - . ID=gene-D5F94_RS07450;Name=D5F94_RS07450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07450;old_locus_tag=D5F94_07450;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 83029 83554 . - 0 ID=cds-D5F94_RS07450;Parent=gene-D5F94_RS07450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085531.1;locus_tag=D5F94_RS07450;product=SAG1386/EF1546 family surface-associated protein;pseudo=true;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 83600 83797 . + . ID=gene-D5F94_RS07455;Name=D5F94_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07455;old_locus_tag=D5F94_07455 NZ_QYTD01000009.1 Protein Homology CDS 83600 83797 . + 0 ID=cds-WP_016480988.1;Parent=gene-D5F94_RS07455;Dbxref=GenBank:WP_016480988.1;Name=WP_016480988.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480988.1;locus_tag=D5F94_RS07455;product=ferredoxin;protein_id=WP_016480988.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 83784 84275 . - . ID=gene-D5F94_RS07460;Name=D5F94_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07460;old_locus_tag=D5F94_07460 NZ_QYTD01000009.1 Protein Homology CDS 83784 84275 . - 0 ID=cds-WP_000593175.1;Parent=gene-D5F94_RS07460;Dbxref=GenBank:WP_000593175.1;Name=WP_000593175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767875.1;locus_tag=D5F94_RS07460;product=EbsA family protein;protein_id=WP_000593175.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 84304 85524 . - . ID=gene-D5F94_RS07465;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=D5F94_RS07465;old_locus_tag=D5F94_07465 NZ_QYTD01000009.1 Protein Homology CDS 84304 85524 . - 0 ID=cds-WP_000119591.1;Parent=gene-D5F94_RS07465;Dbxref=GenBank:WP_000119591.1;Name=WP_000119591.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119594.1;locus_tag=D5F94_RS07465;product=peptidase T;protein_id=WP_000119591.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 85659 87293 . - . ID=gene-D5F94_RS07470;Name=D5F94_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07470;old_locus_tag=D5F94_07470 NZ_QYTD01000009.1 Protein Homology CDS 85659 87293 . - 0 ID=cds-WP_016503018.1;Parent=gene-D5F94_RS07470;Dbxref=GenBank:WP_016503018.1;Name=WP_016503018.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080010.1;locus_tag=D5F94_RS07470;product=putative polysaccharide biosynthesis protein;protein_id=WP_016503018.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 87417 88871 . + . ID=gene-D5F94_RS07475;Name=D5F94_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07475;old_locus_tag=D5F94_07475 NZ_QYTD01000009.1 Protein Homology CDS 87417 88871 . + 0 ID=cds-WP_086163403.1;Parent=gene-D5F94_RS07475;Dbxref=GenBank:WP_086163403.1;Name=WP_086163403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628279.1;locus_tag=D5F94_RS07475;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_086163403.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 89027 89821 . + . ID=gene-D5F94_RS07480;Name=D5F94_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07480;old_locus_tag=D5F94_07480 NZ_QYTD01000009.1 Protein Homology CDS 89027 89821 . + 0 ID=cds-WP_000018231.1;Parent=gene-D5F94_RS07480;Dbxref=GenBank:WP_000018231.1;Name=WP_000018231.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018231.1;locus_tag=D5F94_RS07480;product=ABC transporter ATP-binding protein;protein_id=WP_000018231.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 89845 90777 . + . ID=gene-D5F94_RS07485;Name=D5F94_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07485;old_locus_tag=D5F94_07485 NZ_QYTD01000009.1 Protein Homology CDS 89845 90777 . + 0 ID=cds-WP_000719463.1;Parent=gene-D5F94_RS07485;Dbxref=GenBank:WP_000719463.1;Name=WP_000719463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719452.1;locus_tag=D5F94_RS07485;product=ABC transporter substrate-binding protein;protein_id=WP_000719463.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 90793 91818 . + . ID=gene-D5F94_RS07490;Name=D5F94_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07490;old_locus_tag=D5F94_07490 NZ_QYTD01000009.1 Protein Homology CDS 90793 91818 . + 0 ID=cds-WP_016503020.1;Parent=gene-D5F94_RS07490;Dbxref=GenBank:WP_016503020.1;Name=WP_016503020.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000471515.1;locus_tag=D5F94_RS07490;product=FecCD family ABC transporter permease;protein_id=WP_016503020.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 91815 92816 . + . ID=gene-D5F94_RS07495;Name=D5F94_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07495;old_locus_tag=D5F94_07495 NZ_QYTD01000009.1 Protein Homology CDS 91815 92816 . + 0 ID=cds-WP_000615142.1;Parent=gene-D5F94_RS07495;Dbxref=GenBank:WP_000615142.1;Name=WP_000615142.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480996.1;locus_tag=D5F94_RS07495;product=FecCD family ABC transporter permease;protein_id=WP_000615142.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 92846 93499 . - . ID=gene-D5F94_RS07500;Name=D5F94_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07500;old_locus_tag=D5F94_07500 NZ_QYTD01000009.1 Protein Homology CDS 92846 93499 . - 0 ID=cds-WP_000604060.1;Parent=gene-D5F94_RS07500;Dbxref=GenBank:WP_000604060.1;Name=WP_000604060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016480997.1;locus_tag=D5F94_RS07500;product=DUF1803 domain-containing protein;protein_id=WP_000604060.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 93559 94494 . - . ID=gene-D5F94_RS07505;Name=D5F94_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07505;old_locus_tag=D5F94_07505 NZ_QYTD01000009.1 Protein Homology CDS 93559 94494 . - 0 ID=cds-WP_016503021.1;Parent=gene-D5F94_RS07505;Dbxref=GenBank:WP_016503021.1;Name=WP_016503021.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=D5F94_RS07505;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_016503021.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 94611 95399 . - . ID=gene-D5F94_RS07510;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=D5F94_RS07510;old_locus_tag=D5F94_07510 NZ_QYTD01000009.1 Protein Homology CDS 94611 95399 . - 0 ID=cds-WP_000807697.1;Parent=gene-D5F94_RS07510;Dbxref=GenBank:WP_000807697.1;Name=WP_000807697.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645131.1;locus_tag=D5F94_RS07510;product=pyruvate formate-lyase-activating protein;protein_id=WP_000807697.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 95467 96801 . - . ID=gene-D5F94_RS07515;Name=D5F94_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07515;old_locus_tag=D5F94_07515 NZ_QYTD01000009.1 Protein Homology CDS 95467 96801 . - 0 ID=cds-WP_000389986.1;Parent=gene-D5F94_RS07515;Dbxref=GenBank:WP_000389986.1;Name=WP_000389986.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389990.1;locus_tag=D5F94_RS07515;product=hemolysin family protein;protein_id=WP_000389986.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 96981 97548 . - . ID=gene-D5F94_RS07520;Name=D5F94_RS07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07520;old_locus_tag=D5F94_07520;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 96981 97548 . - 0 ID=cds-D5F94_RS07520;Parent=gene-D5F94_RS07520;Note=frameshifted;Ontology_term=GO:0008033,GO:0032259,GO:0004808,GO:0008757,GO:1904047;gbkey=CDS;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000596040.1;locus_tag=D5F94_RS07520;product=tRNA (mnm(5)s(2)U34)-methyltransferase;pseudo=true;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 97541 98476 . - . ID=gene-D5F94_RS07525;Name=D5F94_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07525;old_locus_tag=D5F94_07525 NZ_QYTD01000009.1 Protein Homology CDS 97541 98476 . - 0 ID=cds-WP_000747789.1;Parent=gene-D5F94_RS07525;Dbxref=GenBank:WP_000747789.1;Name=WP_000747789.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747785.1;locus_tag=D5F94_RS07525;product=TIGR01212 family radical SAM protein;protein_id=WP_000747789.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 98569 99210 . - . ID=gene-D5F94_RS07530;Name=D5F94_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07530;old_locus_tag=D5F94_07530 NZ_QYTD01000009.1 Protein Homology CDS 98569 99210 . - 0 ID=cds-WP_016481001.1;Parent=gene-D5F94_RS07530;Dbxref=GenBank:WP_016481001.1;Name=WP_016481001.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952717.1;locus_tag=D5F94_RS07530;product=phosphatase PAP2 family protein;protein_id=WP_016481001.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 99191 99775 . - . ID=gene-D5F94_RS07535;Name=D5F94_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07535;old_locus_tag=D5F94_07535 NZ_QYTD01000009.1 Protein Homology CDS 99191 99775 . - 0 ID=cds-WP_000185809.1;Parent=gene-D5F94_RS07535;Dbxref=GenBank:WP_000185809.1;Name=WP_000185809.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185809.1;locus_tag=D5F94_RS07535;product=ECF transporter S component;protein_id=WP_000185809.1;transl_table=11 NZ_QYTD01000009.1 cmsearch riboswitch 99845 99990 . - . ID=id-NZ_QYTD01000009.1:99845..99990;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QYTD01000009.1 RefSeq gene 100059 100658 . - . ID=gene-D5F94_RS07540;Name=D5F94_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07540;old_locus_tag=D5F94_07540 NZ_QYTD01000009.1 Protein Homology CDS 100059 100658 . - 0 ID=cds-WP_016481002.1;Parent=gene-D5F94_RS07540;Dbxref=GenBank:WP_016481002.1;Name=WP_016481002.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621247.1;locus_tag=D5F94_RS07540;product=sortase;protein_id=WP_016481002.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 100651 101322 . - . ID=gene-D5F94_RS07545;Name=D5F94_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07545;old_locus_tag=D5F94_07545 NZ_QYTD01000009.1 Protein Homology CDS 100651 101322 . - 0 ID=cds-WP_000639476.1;Parent=gene-D5F94_RS07545;Dbxref=GenBank:WP_000639476.1;Name=WP_000639476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639475.1;locus_tag=D5F94_RS07545;product=hypothetical protein;protein_id=WP_000639476.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 101312 102187 . - . ID=gene-D5F94_RS07550;Name=D5F94_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07550;old_locus_tag=D5F94_07550 NZ_QYTD01000009.1 Protein Homology CDS 101312 102187 . - 0 ID=cds-WP_016481003.1;Parent=gene-D5F94_RS07550;Dbxref=GenBank:WP_016481003.1;Name=WP_016481003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016481003.1;locus_tag=D5F94_RS07550;product=class C sortase;protein_id=WP_016481003.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 102225 103742 . - . ID=gene-D5F94_RS07555;Name=D5F94_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07555;old_locus_tag=D5F94_07555 NZ_QYTD01000009.1 Protein Homology CDS 102225 103742 . - 0 ID=cds-WP_124749529.1;Parent=gene-D5F94_RS07555;Dbxref=GenBank:WP_124749529.1;Name=WP_124749529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728388.1;locus_tag=D5F94_RS07555;product=SpaH/EbpB family LPXTG-anchored major pilin;protein_id=WP_124749529.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 103783 108084 . - . ID=gene-D5F94_RS07560;Name=D5F94_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07560;old_locus_tag=D5F94_07560 NZ_QYTD01000009.1 Protein Homology CDS 103783 108084 . - 0 ID=cds-WP_124749531.1;Parent=gene-D5F94_RS07560;Dbxref=GenBank:WP_124749531.1;Name=WP_124749531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913274.1;locus_tag=D5F94_RS07560;product=InlB B-repeat-containing protein;protein_id=WP_124749531.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 108103 108672 . - . ID=gene-D5F94_RS07565;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D5F94_RS07565;old_locus_tag=D5F94_07565 NZ_QYTD01000009.1 Protein Homology CDS 108103 108672 . - 0 ID=cds-WP_016503026.1;Parent=gene-D5F94_RS07565;Dbxref=GenBank:WP_016503026.1;Name=WP_016503026.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828634.1;locus_tag=D5F94_RS07565;product=signal peptidase I;protein_id=WP_016503026.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 108656 108928 . - . ID=gene-D5F94_RS07570;Name=D5F94_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07570;old_locus_tag=D5F94_07570 NZ_QYTD01000009.1 Protein Homology CDS 108656 108928 . - 0 ID=cds-WP_000389767.1;Parent=gene-D5F94_RS07570;Dbxref=GenBank:WP_000389767.1;Name=WP_000389767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389766.1;locus_tag=D5F94_RS07570;product=hypothetical protein;protein_id=WP_000389767.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 109210 110358 . - . ID=gene-D5F94_RS07575;Name=D5F94_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07575;old_locus_tag=D5F94_07575 NZ_QYTD01000009.1 Protein Homology CDS 109210 110358 . - 0 ID=cds-WP_016503028.1;Parent=gene-D5F94_RS07575;Dbxref=GenBank:WP_016503028.1;Name=WP_016503028.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428970.1;locus_tag=D5F94_RS07575;product=glycosyltransferase family 4 protein;protein_id=WP_016503028.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 110348 111196 . - . ID=gene-D5F94_RS07580;Name=D5F94_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07580;old_locus_tag=D5F94_07580 NZ_QYTD01000009.1 Protein Homology CDS 110348 111196 . - 0 ID=cds-WP_016481009.1;Parent=gene-D5F94_RS07580;Dbxref=GenBank:WP_016481009.1;Name=WP_016481009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875978.1;locus_tag=D5F94_RS07580;product=glycosyltransferase;protein_id=WP_016481009.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 111193 112617 . - . ID=gene-D5F94_RS07585;Name=D5F94_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07585;old_locus_tag=D5F94_07585 NZ_QYTD01000009.1 Protein Homology CDS 111193 112617 . - 0 ID=cds-WP_000771256.1;Parent=gene-D5F94_RS07585;Dbxref=GenBank:WP_000771256.1;Name=WP_000771256.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768353.1;locus_tag=D5F94_RS07585;product=oligosaccharide flippase family protein;protein_id=WP_000771256.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 112617 113981 . - . ID=gene-D5F94_RS07590;Name=D5F94_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07590;old_locus_tag=D5F94_07590 NZ_QYTD01000009.1 Protein Homology CDS 112617 113981 . - 0 ID=cds-WP_001049710.1;Parent=gene-D5F94_RS07590;Dbxref=GenBank:WP_001049710.1;Name=WP_001049710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049705.1;locus_tag=D5F94_RS07590;product=DUF2142 domain-containing protein;protein_id=WP_001049710.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 113983 114930 . - . ID=gene-D5F94_RS07595;Name=D5F94_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07595;old_locus_tag=D5F94_07595 NZ_QYTD01000009.1 Protein Homology CDS 113983 114930 . - 0 ID=cds-WP_016503029.1;Parent=gene-D5F94_RS07595;Dbxref=GenBank:WP_016503029.1;Name=WP_016503029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241108.1;locus_tag=D5F94_RS07595;product=glycosyltransferase;protein_id=WP_016503029.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 114939 115874 . - . ID=gene-D5F94_RS07600;Name=D5F94_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07600;old_locus_tag=D5F94_07600 NZ_QYTD01000009.1 Protein Homology CDS 114939 115874 . - 0 ID=cds-WP_016481011.1;Parent=gene-D5F94_RS07600;Dbxref=GenBank:WP_016481011.1;Name=WP_016481011.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241097.1;locus_tag=D5F94_RS07600;product=glycosyltransferase family 2 protein;protein_id=WP_016481011.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 115876 116934 . - . ID=gene-D5F94_RS07605;Name=D5F94_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07605;old_locus_tag=D5F94_07605 NZ_QYTD01000009.1 Protein Homology CDS 115876 116934 . - 0 ID=cds-WP_086163413.1;Parent=gene-D5F94_RS07605;Dbxref=GenBank:WP_086163413.1;Name=WP_086163413.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648247.1;locus_tag=D5F94_RS07605;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_086163413.1;transl_table=11 NZ_QYTD01000009.1 RefSeq gene 116934 117656 . - . ID=gene-D5F94_RS07610;Name=D5F94_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D5F94_RS07610;old_locus_tag=D5F94_07610 NZ_QYTD01000009.1 Protein Homology CDS 116934 117656 . - 0 ID=cds-WP_000981011.1;Parent=gene-D5F94_RS07610;Dbxref=GenBank:WP_000981011.1;Name=WP_000981011.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645952.1;locus_tag=D5F94_RS07610;product=IspD/TarI family cytidylyltransferase;protein_id=WP_000981011.1;transl_table=11 NZ_QYTD01000009.1 RefSeq pseudogene 117656 118181 . - . ID=gene-D5F94_RS07615;Name=D5F94_RS07615;end_range=118181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D5F94_RS07615;old_locus_tag=D5F94_07615;partial=true;pseudo=true NZ_QYTD01000009.1 Protein Homology CDS 117656 118181 . - 0 ID=cds-D5F94_RS07615;Parent=gene-D5F94_RS07615;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=118181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661828.1;locus_tag=D5F94_RS07615;partial=true;product=LicD family protein;pseudo=true;transl_table=11 ###