##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM284716v1 #!genome-build-accession NCBI_Assembly:GCF_002847165.1 #!annotation-date 06/15/2026 18:36:47 #!annotation-source NCBI RefSeq GCF_002847165.1-RS_2026_06_15 ##sequence-region NZ_PJUR01000001.1 1 232339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000001.1 RefSeq region 1 232339 . + . ID=NZ_PJUR01000001.1:1..232339;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000001.1 RefSeq gene 108 1448 . - . ID=gene-CYJ01_RS00005;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00005;old_locus_tag=CYJ01_00005 NZ_PJUR01000001.1 Protein Homology CDS 108 1448 . - 0 ID=cds-WP_014614019.1;Parent=gene-CYJ01_RS00005;Dbxref=GenBank:WP_014614019.1;Name=WP_014614019.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=CYJ01_RS00005;product=type I glutamate--ammonia ligase;protein_id=WP_014614019.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 1472 1840 . - . ID=gene-CYJ01_RS00010;Name=CYJ01_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00010;old_locus_tag=CYJ01_00010 NZ_PJUR01000001.1 Protein Homology CDS 1472 1840 . - 0 ID=cds-WP_014614020.1;Parent=gene-CYJ01_RS00010;Dbxref=GenBank:WP_014614020.1;Name=WP_014614020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424965.1;locus_tag=CYJ01_RS00010;product=MerR family transcriptional regulator;protein_id=WP_014614020.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 2016 3263 . - . ID=gene-CYJ01_RS00015;Name=CYJ01_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00015;old_locus_tag=CYJ01_00015 NZ_PJUR01000001.1 Protein Homology CDS 2016 3263 . - 0 ID=cds-WP_014614021.1;Parent=gene-CYJ01_RS00015;Dbxref=GenBank:WP_014614021.1;Name=WP_014614021.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614021.1;locus_tag=CYJ01_RS00015;product=methionine gamma-lyase family protein;protein_id=WP_014614021.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 3281 4513 . - . ID=gene-CYJ01_RS00020;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CYJ01_RS00020;old_locus_tag=CYJ01_00020 NZ_PJUR01000001.1 Protein Homology CDS 3281 4513 . - 0 ID=cds-WP_101431355.1;Parent=gene-CYJ01_RS00020;Dbxref=GenBank:WP_101431355.1;Name=WP_101431355.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165422.1;locus_tag=CYJ01_RS00020;product=GTPase HflX;protein_id=WP_101431355.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 4619 5092 . + . ID=gene-CYJ01_RS00025;Name=CYJ01_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00025;old_locus_tag=CYJ01_00025 NZ_PJUR01000001.1 Protein Homology CDS 4619 5092 . + 0 ID=cds-WP_014614023.1;Parent=gene-CYJ01_RS00025;Dbxref=GenBank:WP_014614023.1;Name=WP_014614023.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=CYJ01_RS00025;product=glutathione peroxidase;protein_id=WP_014614023.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 5850 6803 . + . ID=gene-CYJ01_RS00030;Name=CYJ01_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00030;old_locus_tag=CYJ01_00030 NZ_PJUR01000001.1 Protein Homology CDS 5850 6803 . + 0 ID=cds-WP_101431356.1;Parent=gene-CYJ01_RS00030;Dbxref=GenBank:WP_101431356.1;Name=WP_101431356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=CYJ01_RS00030;product=alpha/beta hydrolase;protein_id=WP_101431356.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 6790 7746 . + . ID=gene-CYJ01_RS00035;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00035;old_locus_tag=CYJ01_00035 NZ_PJUR01000001.1 Protein Homology CDS 6790 7746 . + 0 ID=cds-WP_101431357.1;Parent=gene-CYJ01_RS00035;Dbxref=GenBank:WP_101431357.1;Name=WP_101431357.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167781.1;locus_tag=CYJ01_RS00035;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_101431357.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 7739 7945 . + . ID=gene-CYJ01_RS00040;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CYJ01_RS00040;old_locus_tag=CYJ01_00040 NZ_PJUR01000001.1 Protein Homology CDS 7739 7945 . + 0 ID=cds-WP_014614028.1;Parent=gene-CYJ01_RS00040;Dbxref=GenBank:WP_014614028.1;Name=WP_014614028.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=CYJ01_RS00040;product=RNA chaperone Hfq;protein_id=WP_014614028.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 8238 9908 . - . ID=gene-CYJ01_RS00045;Name=CYJ01_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00045;old_locus_tag=CYJ01_00045 NZ_PJUR01000001.1 Protein Homology CDS 8238 9908 . - 0 ID=cds-WP_015729065.1;Parent=gene-CYJ01_RS00045;Dbxref=GenBank:WP_015729065.1;Name=WP_015729065.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614029.1;locus_tag=CYJ01_RS00045;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_015729065.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 10035 11537 . - . ID=gene-CYJ01_RS00050;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CYJ01_RS00050;old_locus_tag=CYJ01_00050 NZ_PJUR01000001.1 Protein Homology CDS 10035 11537 . - 0 ID=cds-WP_070407552.1;Parent=gene-CYJ01_RS00050;Dbxref=GenBank:WP_070407552.1;Name=WP_070407552.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165429.1;locus_tag=CYJ01_RS00050;product=glycerol kinase GlpK;protein_id=WP_070407552.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 11833 12648 . - . ID=gene-CYJ01_RS00055;Name=CYJ01_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00055;old_locus_tag=CYJ01_00055 NZ_PJUR01000001.1 Protein Homology CDS 11833 12648 . - 0 ID=cds-WP_014614031.1;Parent=gene-CYJ01_RS00055;Dbxref=GenBank:WP_014614031.1;Name=WP_014614031.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=CYJ01_RS00055;product=MIP/aquaporin family protein;protein_id=WP_014614031.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 12887 13915 . - . ID=gene-CYJ01_RS00060;Name=CYJ01_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00060;old_locus_tag=CYJ01_00060 NZ_PJUR01000001.1 Protein Homology CDS 12887 13915 . - 0 ID=cds-WP_014614032.1;Parent=gene-CYJ01_RS00060;Dbxref=GenBank:WP_014614032.1;Name=WP_014614032.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729064.1;locus_tag=CYJ01_RS00060;product=S66 family peptidase;protein_id=WP_014614032.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 13943 14476 . - . ID=gene-CYJ01_RS00065;Name=CYJ01_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00065;old_locus_tag=CYJ01_00065 NZ_PJUR01000001.1 Protein Homology CDS 13943 14476 . - 0 ID=cds-WP_014614033.1;Parent=gene-CYJ01_RS00065;Dbxref=GenBank:WP_014614033.1;Name=WP_014614033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165432.1;locus_tag=CYJ01_RS00065;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_014614033.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 14488 16428 . - . ID=gene-CYJ01_RS00070;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CYJ01_RS00070;old_locus_tag=CYJ01_00070 NZ_PJUR01000001.1 Protein Homology CDS 14488 16428 . - 0 ID=cds-WP_014614034.1;Parent=gene-CYJ01_RS00070;Dbxref=GenBank:WP_014614034.1;Name=WP_014614034.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729062.1;locus_tag=CYJ01_RS00070;product=DNA mismatch repair endonuclease MutL;protein_id=WP_014614034.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 16443 19040 . - . ID=gene-CYJ01_RS00075;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CYJ01_RS00075;old_locus_tag=CYJ01_00075 NZ_PJUR01000001.1 Protein Homology CDS 16443 19040 . - 0 ID=cds-WP_101457066.1;Parent=gene-CYJ01_RS00075;Dbxref=GenBank:WP_101457066.1;Name=WP_101457066.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614035.1;locus_tag=CYJ01_RS00075;product=DNA mismatch repair protein MutS;protein_id=WP_101457066.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 19694 20203 . - . ID=gene-CYJ01_RS00080;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CYJ01_RS00080;old_locus_tag=CYJ01_00080 NZ_PJUR01000001.1 Protein Homology CDS 19694 20203 . - 0 ID=cds-WP_101457067.1;Parent=gene-CYJ01_RS00080;Dbxref=GenBank:WP_101457067.1;Name=WP_101457067.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614036.1;locus_tag=CYJ01_RS00080;product=energy coupling factor transporter S component ThiW;protein_id=WP_101457067.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 20258 20635 . - . ID=gene-CYJ01_RS00085;Name=CYJ01_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00085;old_locus_tag=CYJ01_00085 NZ_PJUR01000001.1 Protein Homology CDS 20258 20635 . - 0 ID=cds-WP_014614037.1;Parent=gene-CYJ01_RS00085;Dbxref=GenBank:WP_014614037.1;Name=WP_014614037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=CYJ01_RS00085;product=YlbF family regulator;protein_id=WP_014614037.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 20636 22186 . - . ID=gene-CYJ01_RS00090;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00090;old_locus_tag=CYJ01_00090 NZ_PJUR01000001.1 Protein Homology CDS 20636 22186 . - 0 ID=cds-WP_014614038.1;Parent=gene-CYJ01_RS00090;Dbxref=GenBank:WP_014614038.1;Name=WP_014614038.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=CYJ01_RS00090;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_014614038.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 22290 22589 . - . ID=gene-CYJ01_RS00095;Name=CYJ01_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00095;old_locus_tag=CYJ01_00095 NZ_PJUR01000001.1 Protein Homology CDS 22290 22589 . - 0 ID=cds-WP_014614039.1;Parent=gene-CYJ01_RS00095;Dbxref=GenBank:WP_014614039.1;Name=WP_014614039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729060.1;locus_tag=CYJ01_RS00095;product=thiamine-binding protein;protein_id=WP_014614039.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 22848 23714 . - . ID=gene-CYJ01_RS00100;Name=CYJ01_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00100;old_locus_tag=CYJ01_00100 NZ_PJUR01000001.1 Protein Homology CDS 22848 23714 . - 0 ID=cds-WP_014614040.1;Parent=gene-CYJ01_RS00100;Dbxref=GenBank:WP_014614040.1;Name=WP_014614040.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=CYJ01_RS00100;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_014614040.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 23715 25475 . - . ID=gene-CYJ01_RS00105;Name=CYJ01_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00105;old_locus_tag=CYJ01_00105 NZ_PJUR01000001.1 Protein Homology CDS 23715 25475 . - 0 ID=cds-WP_014614041.1;Parent=gene-CYJ01_RS00105;Dbxref=GenBank:WP_014614041.1;Name=WP_014614041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=CYJ01_RS00105;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_014614041.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 25628 26422 . - . ID=gene-CYJ01_RS00110;Name=CYJ01_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00110;old_locus_tag=CYJ01_00110 NZ_PJUR01000001.1 Protein Homology CDS 25628 26422 . - 0 ID=cds-WP_014614042.1;Parent=gene-CYJ01_RS00110;Dbxref=GenBank:WP_014614042.1;Name=WP_014614042.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167795.1;locus_tag=CYJ01_RS00110;product=TIGR00282 family metallophosphoesterase;protein_id=WP_014614042.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 26752 28926 . - . ID=gene-CYJ01_RS00115;Name=CYJ01_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00115;old_locus_tag=CYJ01_00115 NZ_PJUR01000001.1 Protein Homology CDS 26752 28926 . - 0 ID=cds-WP_096535759.1;Parent=gene-CYJ01_RS00115;Dbxref=GenBank:WP_096535759.1;Name=WP_096535759.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=CYJ01_RS00115;product=heavy metal translocating P-type ATPase;protein_id=WP_096535759.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 28910 29290 . - . ID=gene-CYJ01_RS00120;Name=CYJ01_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00120;old_locus_tag=CYJ01_00120 NZ_PJUR01000001.1 Protein Homology CDS 28910 29290 . - 0 ID=cds-WP_096535761.1;Parent=gene-CYJ01_RS00120;Dbxref=GenBank:WP_096535761.1;Name=WP_096535761.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=CYJ01_RS00120;product=ArsR/SmtB family transcription factor;protein_id=WP_096535761.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 29488 29706 . + . ID=gene-CYJ01_RS00125;Name=CYJ01_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00125;old_locus_tag=CYJ01_00125 NZ_PJUR01000001.1 Protein Homology CDS 29488 29706 . + 0 ID=cds-WP_014614046.1;Parent=gene-CYJ01_RS00125;Dbxref=GenBank:WP_014614046.1;Name=WP_014614046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165444.1;locus_tag=CYJ01_RS00125;product=hypothetical protein;protein_id=WP_014614046.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 29829 31388 . - . ID=gene-CYJ01_RS00130;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CYJ01_RS00130;old_locus_tag=CYJ01_00130 NZ_PJUR01000001.1 Protein Homology CDS 29829 31388 . - 0 ID=cds-WP_014614047.1;Parent=gene-CYJ01_RS00130;Dbxref=GenBank:WP_014614047.1;Name=WP_014614047.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CYJ01_RS00130;product=ribonuclease Y;protein_id=WP_014614047.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 31615 32658 . - . ID=gene-CYJ01_RS00135;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00135;old_locus_tag=CYJ01_00135 NZ_PJUR01000001.1 Protein Homology CDS 31615 32658 . - 0 ID=cds-WP_014614049.1;Parent=gene-CYJ01_RS00135;Dbxref=GenBank:WP_014614049.1;Name=WP_014614049.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=CYJ01_RS00135;product=recombinase RecA;protein_id=WP_014614049.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 32797 33972 . - . ID=gene-CYJ01_RS00140;Name=CYJ01_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00140;old_locus_tag=CYJ01_00140 NZ_PJUR01000001.1 Protein Homology CDS 32797 33972 . - 0 ID=cds-WP_101457068.1;Parent=gene-CYJ01_RS00140;Dbxref=GenBank:WP_101457068.1;Name=WP_101457068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165447.1;locus_tag=CYJ01_RS00140;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_101457068.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 34193 34777 . - . ID=gene-CYJ01_RS00145;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00145;old_locus_tag=CYJ01_00145 NZ_PJUR01000001.1 Protein Homology CDS 34193 34777 . - 0 ID=cds-WP_014614051.1;Parent=gene-CYJ01_RS00145;Dbxref=GenBank:WP_014614051.1;Name=WP_014614051.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=CYJ01_RS00145;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_014614051.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 34819 35214 . - . ID=gene-CYJ01_RS00150;Name=CYJ01_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00150;old_locus_tag=CYJ01_00150 NZ_PJUR01000001.1 Protein Homology CDS 34819 35214 . - 0 ID=cds-WP_014614052.1;Parent=gene-CYJ01_RS00150;Dbxref=GenBank:WP_014614052.1;Name=WP_014614052.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167802.1;locus_tag=CYJ01_RS00150;product=helix-turn-helix domain-containing protein;protein_id=WP_014614052.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 35233 36078 . - . ID=gene-CYJ01_RS00155;Name=CYJ01_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00155;old_locus_tag=CYJ01_00155 NZ_PJUR01000001.1 Protein Homology CDS 35233 36078 . - 0 ID=cds-WP_014614053.1;Parent=gene-CYJ01_RS00155;Dbxref=GenBank:WP_014614053.1;Name=WP_014614053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165450.1;locus_tag=CYJ01_RS00155;product=DUF3388 domain-containing protein;protein_id=WP_014614053.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 36135 36839 . - . ID=gene-CYJ01_RS00160;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=CYJ01_RS00160;old_locus_tag=CYJ01_00160 NZ_PJUR01000001.1 Protein Homology CDS 36135 36839 . - 0 ID=cds-WP_037543163.1;Parent=gene-CYJ01_RS00160;Dbxref=GenBank:WP_037543163.1;Name=WP_037543163.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165451.1;locus_tag=CYJ01_RS00160;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_037543163.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 36836 38125 . - . ID=gene-CYJ01_RS00165;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=CYJ01_RS00165;old_locus_tag=CYJ01_00165 NZ_PJUR01000001.1 Protein Homology CDS 36836 38125 . - 0 ID=cds-WP_063278804.1;Parent=gene-CYJ01_RS00165;Dbxref=GenBank:WP_063278804.1;Name=WP_063278804.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729056.1;locus_tag=CYJ01_RS00165;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_063278804.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 38118 39392 . - . ID=gene-CYJ01_RS00170;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=CYJ01_RS00170;old_locus_tag=CYJ01_00170 NZ_PJUR01000001.1 Protein Homology CDS 38118 39392 . - 0 ID=cds-WP_037543167.1;Parent=gene-CYJ01_RS00170;Dbxref=GenBank:WP_037543167.1;Name=WP_037543167.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=CYJ01_RS00170;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_037543167.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 39426 40142 . - . ID=gene-CYJ01_RS00175;Name=CYJ01_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00175;old_locus_tag=CYJ01_00175 NZ_PJUR01000001.1 Protein Homology CDS 39426 40142 . - 0 ID=cds-WP_014614057.1;Parent=gene-CYJ01_RS00175;Dbxref=GenBank:WP_014614057.1;Name=WP_014614057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=CYJ01_RS00175;product=GntR family transcriptional regulator;protein_id=WP_014614057.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 40148 42511 . - . ID=gene-CYJ01_RS00180;Name=CYJ01_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00180;old_locus_tag=CYJ01_00180 NZ_PJUR01000001.1 Protein Homology CDS 40148 42511 . - 0 ID=cds-WP_015729054.1;Parent=gene-CYJ01_RS00180;Dbxref=GenBank:WP_015729054.1;Name=WP_015729054.1;Ontology_term=GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729054.1;locus_tag=CYJ01_RS00180;product=DNA translocase FtsK;protein_id=WP_015729054.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 42650 44323 . - . ID=gene-CYJ01_RS00185;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00185;old_locus_tag=CYJ01_00185 NZ_PJUR01000001.1 Protein Homology CDS 42650 44323 . - 0 ID=cds-WP_014614059.1;Parent=gene-CYJ01_RS00185;Dbxref=GenBank:WP_014614059.1;Name=WP_014614059.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CYJ01_RS00185;product=ribonuclease J2;protein_id=WP_014614059.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 44833 46926 . - . ID=gene-CYJ01_RS00195;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CYJ01_RS00195;old_locus_tag=CYJ01_00195 NZ_PJUR01000001.1 Protein Homology CDS 44833 46926 . - 0 ID=cds-WP_101457069.1;Parent=gene-CYJ01_RS00195;Dbxref=GenBank:WP_101457069.1;Name=WP_101457069.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614061.1;locus_tag=CYJ01_RS00195;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_101457069.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 47085 47354 . - . ID=gene-CYJ01_RS00200;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CYJ01_RS00200;old_locus_tag=CYJ01_00200 NZ_PJUR01000001.1 Protein Homology CDS 47085 47354 . - 0 ID=cds-WP_014614062.1;Parent=gene-CYJ01_RS00200;Dbxref=GenBank:WP_014614062.1;Name=WP_014614062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CYJ01_RS00200;product=30S ribosomal protein S15;protein_id=WP_014614062.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 47455 48426 . - . ID=gene-CYJ01_RS00205;Name=CYJ01_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00205;old_locus_tag=CYJ01_00205 NZ_PJUR01000001.1 Protein Homology CDS 47455 48426 . - 0 ID=cds-WP_101431368.1;Parent=gene-CYJ01_RS00205;Dbxref=GenBank:WP_101431368.1;Name=WP_101431368.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476021.1;locus_tag=CYJ01_RS00205;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_101431368.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 48441 49358 . - . ID=gene-CYJ01_RS00210;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00210;old_locus_tag=CYJ01_00210 NZ_PJUR01000001.1 Protein Homology CDS 48441 49358 . - 0 ID=cds-WP_014614064.1;Parent=gene-CYJ01_RS00210;Dbxref=GenBank:WP_014614064.1;Name=WP_014614064.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=CYJ01_RS00210;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014614064.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 49443 49787 . - . ID=gene-CYJ01_RS00215;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00215;old_locus_tag=CYJ01_00215 NZ_PJUR01000001.1 Protein Homology CDS 49443 49787 . - 0 ID=cds-WP_014614065.1;Parent=gene-CYJ01_RS00215;Dbxref=GenBank:WP_014614065.1;Name=WP_014614065.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=CYJ01_RS00215;product=30S ribosome-binding factor RbfA;protein_id=WP_014614065.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 50532 50771 . - . ID=gene-CYJ01_RS00220;Name=CYJ01_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00220;old_locus_tag=CYJ01_00220 NZ_PJUR01000001.1 Protein Homology CDS 50532 50771 . - 0 ID=cds-WP_014614066.1;Parent=gene-CYJ01_RS00220;Dbxref=GenBank:WP_014614066.1;Name=WP_014614066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614066.1;locus_tag=CYJ01_RS00220;product=hypothetical protein;protein_id=WP_014614066.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 50986 53124 . - . ID=gene-CYJ01_RS00225;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00225;old_locus_tag=CYJ01_00225 NZ_PJUR01000001.1 Protein Homology CDS 50986 53124 . - 0 ID=cds-WP_015729051.1;Parent=gene-CYJ01_RS00225;Dbxref=GenBank:WP_015729051.1;Name=WP_015729051.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=CYJ01_RS00225;product=translation initiation factor IF-2;protein_id=WP_015729051.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 53141 53446 . - . ID=gene-CYJ01_RS00230;Name=CYJ01_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00230;old_locus_tag=CYJ01_00230 NZ_PJUR01000001.1 Protein Homology CDS 53141 53446 . - 0 ID=cds-WP_014614068.1;Parent=gene-CYJ01_RS00230;Dbxref=GenBank:WP_014614068.1;Name=WP_014614068.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=CYJ01_RS00230;product=YlxQ family RNA-binding protein;protein_id=WP_014614068.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 53443 53730 . - . ID=gene-CYJ01_RS00235;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=CYJ01_RS00235;old_locus_tag=CYJ01_00235 NZ_PJUR01000001.1 Protein Homology CDS 53443 53730 . - 0 ID=cds-WP_014614069.1;Parent=gene-CYJ01_RS00235;Dbxref=GenBank:WP_014614069.1;Name=WP_014614069.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=CYJ01_RS00235;product=RNase P modulator RnpM;protein_id=WP_014614069.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 53742 54920 . - . ID=gene-CYJ01_RS00240;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00240;old_locus_tag=CYJ01_00240 NZ_PJUR01000001.1 Protein Homology CDS 53742 54920 . - 0 ID=cds-WP_014614070.1;Parent=gene-CYJ01_RS00240;Dbxref=GenBank:WP_014614070.1;Name=WP_014614070.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729050.1;locus_tag=CYJ01_RS00240;product=transcription termination factor NusA;protein_id=WP_014614070.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 54941 55408 . - . ID=gene-CYJ01_RS00245;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CYJ01_RS00245;old_locus_tag=CYJ01_00245 NZ_PJUR01000001.1 Protein Homology CDS 54941 55408 . - 0 ID=cds-WP_014614071.1;Parent=gene-CYJ01_RS00245;Dbxref=GenBank:WP_014614071.1;Name=WP_014614071.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=CYJ01_RS00245;product=ribosome maturation factor RimP;protein_id=WP_014614071.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 55533 59840 . - . ID=gene-CYJ01_RS00250;Name=CYJ01_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00250;old_locus_tag=CYJ01_00250 NZ_PJUR01000001.1 Protein Homology CDS 55533 59840 . - 0 ID=cds-WP_101457070.1;Parent=gene-CYJ01_RS00250;Dbxref=GenBank:WP_101457070.1;Name=WP_101457070.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729049.1;locus_tag=CYJ01_RS00250;product=PolC-type DNA polymerase III;protein_id=WP_101457070.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 60757 62460 . - . ID=gene-CYJ01_RS00255;Name=CYJ01_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00255;old_locus_tag=CYJ01_00255 NZ_PJUR01000001.1 Protein Homology CDS 60757 62460 . - 0 ID=cds-WP_101457071.1;Parent=gene-CYJ01_RS00255;Dbxref=GenBank:WP_101457071.1;Name=WP_101457071.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275937.1;locus_tag=CYJ01_RS00255;product=proline--tRNA ligase;protein_id=WP_101457071.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 62485 63765 . - . ID=gene-CYJ01_RS00260;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CYJ01_RS00260;old_locus_tag=CYJ01_00260 NZ_PJUR01000001.1 Protein Homology CDS 62485 63765 . - 0 ID=cds-WP_015729046.1;Parent=gene-CYJ01_RS00260;Dbxref=GenBank:WP_015729046.1;Name=WP_015729046.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=CYJ01_RS00260;product=RIP metalloprotease RseP;protein_id=WP_015729046.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 63772 64902 . - . ID=gene-CYJ01_RS00265;Name=CYJ01_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00265;old_locus_tag=CYJ01_00265 NZ_PJUR01000001.1 Protein Homology CDS 63772 64902 . - 0 ID=cds-WP_133121608.1;Parent=gene-CYJ01_RS00265;Dbxref=GenBank:WP_133121608.1;Name=WP_133121608.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016910764.1;locus_tag=CYJ01_RS00265;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_133121608.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 64919 65701 . - . ID=gene-CYJ01_RS00270;Name=CYJ01_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00270;old_locus_tag=CYJ01_00270 NZ_PJUR01000001.1 Protein Homology CDS 64919 65701 . - 0 ID=cds-WP_014614077.1;Parent=gene-CYJ01_RS00270;Dbxref=GenBank:WP_014614077.1;Name=WP_014614077.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=CYJ01_RS00270;product=phosphatidate cytidylyltransferase;protein_id=WP_014614077.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 65716 66477 . - . ID=gene-CYJ01_RS00275;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=CYJ01_RS00275;old_locus_tag=CYJ01_00275 NZ_PJUR01000001.1 Protein Homology CDS 65716 66477 . - 0 ID=cds-WP_014614078.1;Parent=gene-CYJ01_RS00275;Dbxref=GenBank:WP_014614078.1;Name=WP_014614078.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=CYJ01_RS00275;product=undecaprenyl pyrophosphate synthase;protein_id=WP_014614078.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 66721 67275 . - . ID=gene-CYJ01_RS00280;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CYJ01_RS00280;old_locus_tag=CYJ01_00280 NZ_PJUR01000001.1 Protein Homology CDS 66721 67275 . - 0 ID=cds-WP_014614079.1;Parent=gene-CYJ01_RS00280;Dbxref=GenBank:WP_014614079.1;Name=WP_014614079.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CYJ01_RS00280;product=ribosome recycling factor;protein_id=WP_014614079.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 67293 68015 . - . ID=gene-CYJ01_RS00285;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CYJ01_RS00285;old_locus_tag=CYJ01_00285 NZ_PJUR01000001.1 Protein Homology CDS 67293 68015 . - 0 ID=cds-WP_014614080.1;Parent=gene-CYJ01_RS00285;Dbxref=GenBank:WP_014614080.1;Name=WP_014614080.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CYJ01_RS00285;product=UMP kinase;protein_id=WP_014614080.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 68167 69045 . - . ID=gene-CYJ01_RS00290;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CYJ01_RS00290;old_locus_tag=CYJ01_00290 NZ_PJUR01000001.1 Protein Homology CDS 68167 69045 . - 0 ID=cds-WP_014614081.1;Parent=gene-CYJ01_RS00290;Dbxref=GenBank:WP_014614081.1;Name=WP_014614081.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CYJ01_RS00290;product=translation elongation factor Ts;protein_id=WP_014614081.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 69135 69932 . - . ID=gene-CYJ01_RS00295;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00295;old_locus_tag=CYJ01_00295 NZ_PJUR01000001.1 Protein Homology CDS 69135 69932 . - 0 ID=cds-WP_014614082.1;Parent=gene-CYJ01_RS00295;Dbxref=GenBank:WP_014614082.1;Name=WP_014614082.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=CYJ01_RS00295;product=30S ribosomal protein S2;protein_id=WP_014614082.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 70099 70872 . - . ID=gene-CYJ01_RS00300;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=CYJ01_RS00300;old_locus_tag=CYJ01_00300 NZ_PJUR01000001.1 Protein Homology CDS 70099 70872 . - 0 ID=cds-WP_014614083.1;Parent=gene-CYJ01_RS00300;Dbxref=GenBank:WP_014614083.1;Name=WP_014614083.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=CYJ01_RS00300;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_014614083.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 70892 72301 . - . ID=gene-CYJ01_RS00305;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CYJ01_RS00305;old_locus_tag=CYJ01_00305 NZ_PJUR01000001.1 Protein Homology CDS 70892 72301 . - 0 ID=cds-WP_101457073.1;Parent=gene-CYJ01_RS00305;Dbxref=GenBank:WP_101457073.1;Name=WP_101457073.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275946.1;locus_tag=CYJ01_RS00305;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_101457073.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 72316 72858 . - . ID=gene-CYJ01_RS00310;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CYJ01_RS00310;old_locus_tag=CYJ01_00310 NZ_PJUR01000001.1 Protein Homology CDS 72316 72858 . - 0 ID=cds-WP_014614085.1;Parent=gene-CYJ01_RS00310;Dbxref=GenBank:WP_014614085.1;Name=WP_014614085.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=CYJ01_RS00310;product=ATP-dependent protease subunit HslV;protein_id=WP_014614085.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 72865 73776 . - . ID=gene-CYJ01_RS00315;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00315;old_locus_tag=CYJ01_00315 NZ_PJUR01000001.1 Protein Homology CDS 72865 73776 . - 0 ID=cds-WP_015729043.1;Parent=gene-CYJ01_RS00315;Dbxref=GenBank:WP_015729043.1;Name=WP_015729043.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729043.1;locus_tag=CYJ01_RS00315;product=tyrosine recombinase XerC;protein_id=WP_015729043.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 73876 75180 . - . ID=gene-CYJ01_RS00320;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CYJ01_RS00320;old_locus_tag=CYJ01_00320 NZ_PJUR01000001.1 Protein Homology CDS 73876 75180 . - 0 ID=cds-WP_101457074.1;Parent=gene-CYJ01_RS00320;Dbxref=GenBank:WP_101457074.1;Name=WP_101457074.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=CYJ01_RS00320;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_101457074.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 75208 77277 . - . ID=gene-CYJ01_RS00325;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00325;old_locus_tag=CYJ01_00325 NZ_PJUR01000001.1 Protein Homology CDS 75208 77277 . - 0 ID=cds-WP_014614088.1;Parent=gene-CYJ01_RS00325;Dbxref=GenBank:WP_014614088.1;Name=WP_014614088.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CYJ01_RS00325;product=type I DNA topoisomerase;protein_id=WP_014614088.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 77361 78248 . - . ID=gene-CYJ01_RS00330;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00330;old_locus_tag=CYJ01_00330 NZ_PJUR01000001.1 Protein Homology CDS 77361 78248 . - 0 ID=cds-WP_100006559.1;Parent=gene-CYJ01_RS00330;Dbxref=GenBank:WP_100006559.1;Name=WP_100006559.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614089.1;locus_tag=CYJ01_RS00330;product=DNA-processing protein DprA;protein_id=WP_100006559.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 78483 79388 . - . ID=gene-CYJ01_RS00335;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CYJ01_RS00335;old_locus_tag=CYJ01_00335 NZ_PJUR01000001.1 Protein Homology CDS 78483 79388 . - 0 ID=cds-WP_063284338.1;Parent=gene-CYJ01_RS00335;Dbxref=GenBank:WP_063284338.1;Name=WP_063284338.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167870.1;locus_tag=CYJ01_RS00335;product=succinate--CoA ligase subunit alpha;protein_id=WP_063284338.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 79410 80576 . - . ID=gene-CYJ01_RS00340;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00340;old_locus_tag=CYJ01_00340 NZ_PJUR01000001.1 Protein Homology CDS 79410 80576 . - 0 ID=cds-WP_015729040.1;Parent=gene-CYJ01_RS00340;Dbxref=GenBank:WP_015729040.1;Name=WP_015729040.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CYJ01_RS00340;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_015729040.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 80843 81118 . - . ID=gene-CYJ01_RS00345;Name=CYJ01_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00345;old_locus_tag=CYJ01_00345 NZ_PJUR01000001.1 Protein Homology CDS 80843 81118 . - 0 ID=cds-WP_015729039.1;Parent=gene-CYJ01_RS00345;Dbxref=GenBank:WP_015729039.1;Name=WP_015729039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614092.1;locus_tag=CYJ01_RS00345;product=hypothetical protein;protein_id=WP_015729039.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 81210 81995 . - . ID=gene-CYJ01_RS00350;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00350;old_locus_tag=CYJ01_00350 NZ_PJUR01000001.1 Protein Homology CDS 81210 81995 . - 0 ID=cds-WP_037543184.1;Parent=gene-CYJ01_RS00350;Dbxref=GenBank:WP_037543184.1;Name=WP_037543184.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=CYJ01_RS00350;product=ribonuclease HII;protein_id=WP_037543184.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 81988 82860 . - . ID=gene-CYJ01_RS00355;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=CYJ01_RS00355;old_locus_tag=CYJ01_00355 NZ_PJUR01000001.1 Protein Homology CDS 81988 82860 . - 0 ID=cds-WP_015729037.1;Parent=gene-CYJ01_RS00355;Dbxref=GenBank:WP_015729037.1;Name=WP_015729037.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167874.1;locus_tag=CYJ01_RS00355;product=ribosome biogenesis GTPase YlqF;protein_id=WP_015729037.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 83088 83471 . + . ID=gene-CYJ01_RS00360;Name=CYJ01_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00360;old_locus_tag=CYJ01_00360 NZ_PJUR01000001.1 Protein Homology CDS 83088 83471 . + 0 ID=cds-WP_015729036.1;Parent=gene-CYJ01_RS00360;Dbxref=GenBank:WP_015729036.1;Name=WP_015729036.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=CYJ01_RS00360;product=GtrA family protein;protein_id=WP_015729036.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 83491 86100 . + . ID=gene-CYJ01_RS00365;Name=CYJ01_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00365;old_locus_tag=CYJ01_00365 NZ_PJUR01000001.1 Protein Homology CDS 83491 86100 . + 0 ID=cds-WP_101457075.1;Parent=gene-CYJ01_RS00365;Dbxref=GenBank:WP_101457075.1;Name=WP_101457075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=CYJ01_RS00365;product=YfhO family protein;protein_id=WP_101457075.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 86097 88691 . + . ID=gene-CYJ01_RS00370;Name=CYJ01_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00370;old_locus_tag=CYJ01_00370 NZ_PJUR01000001.1 Protein Homology CDS 86097 88691 . + 0 ID=cds-WP_101457076.1;Parent=gene-CYJ01_RS00370;Dbxref=GenBank:WP_101457076.1;Name=WP_101457076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729034.1;locus_tag=CYJ01_RS00370;product=YfhO family protein;protein_id=WP_101457076.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 88918 89550 . + . ID=gene-CYJ01_RS00375;Name=CYJ01_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00375;old_locus_tag=CYJ01_00375 NZ_PJUR01000001.1 Protein Homology CDS 88918 89550 . + 0 ID=cds-WP_101457077.1;Parent=gene-CYJ01_RS00375;Dbxref=GenBank:WP_101457077.1;Name=WP_101457077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219877.1;locus_tag=CYJ01_RS00375;product=hypothetical protein;protein_id=WP_101457077.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 89715 90443 . - . ID=gene-CYJ01_RS00380;Name=CYJ01_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00380;old_locus_tag=CYJ01_00380 NZ_PJUR01000001.1 Protein Homology CDS 89715 90443 . - 0 ID=cds-WP_100004241.1;Parent=gene-CYJ01_RS00380;Dbxref=GenBank:WP_100004241.1;Name=WP_100004241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729032.1;locus_tag=CYJ01_RS00380;product=hypothetical protein;protein_id=WP_100004241.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 90436 90834 . - . ID=gene-CYJ01_RS00385;Name=CYJ01_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00385;old_locus_tag=CYJ01_00385 NZ_PJUR01000001.1 Protein Homology CDS 90436 90834 . - 0 ID=cds-WP_014614100.1;Parent=gene-CYJ01_RS00385;Dbxref=GenBank:WP_014614100.1;Name=WP_014614100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219879.1;locus_tag=CYJ01_RS00385;product=hypothetical protein;protein_id=WP_014614100.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 90835 91263 . - . ID=gene-CYJ01_RS00390;Name=CYJ01_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00390;old_locus_tag=CYJ01_00390 NZ_PJUR01000001.1 Protein Homology CDS 90835 91263 . - 0 ID=cds-WP_015729030.1;Parent=gene-CYJ01_RS00390;Dbxref=GenBank:WP_015729030.1;Name=WP_015729030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729030.1;locus_tag=CYJ01_RS00390;product=hypothetical protein;protein_id=WP_015729030.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 91767 91904 . + . ID=gene-CYJ01_RS00395;Name=CYJ01_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00395;old_locus_tag=CYJ01_00395 NZ_PJUR01000001.1 Protein Homology CDS 91767 91904 . + 0 ID=cds-WP_014614102.1;Parent=gene-CYJ01_RS00395;Dbxref=GenBank:WP_014614102.1;Name=WP_014614102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614102.1;locus_tag=CYJ01_RS00395;product=beta-class phenol-soluble modulin;protein_id=WP_014614102.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 92172 92522 . - . ID=gene-CYJ01_RS00400;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CYJ01_RS00400;old_locus_tag=CYJ01_00400 NZ_PJUR01000001.1 Protein Homology CDS 92172 92522 . - 0 ID=cds-WP_014614103.1;Parent=gene-CYJ01_RS00400;Dbxref=GenBank:WP_014614103.1;Name=WP_014614103.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=CYJ01_RS00400;product=50S ribosomal protein L19;protein_id=WP_014614103.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 92630 93361 . - . ID=gene-CYJ01_RS00405;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CYJ01_RS00405;old_locus_tag=CYJ01_00405 NZ_PJUR01000001.1 Protein Homology CDS 92630 93361 . - 0 ID=cds-WP_070407564.1;Parent=gene-CYJ01_RS00405;Dbxref=GenBank:WP_070407564.1;Name=WP_070407564.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165492.1;locus_tag=CYJ01_RS00405;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_070407564.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 93358 93861 . - . ID=gene-CYJ01_RS00410;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CYJ01_RS00410;old_locus_tag=CYJ01_00410 NZ_PJUR01000001.1 Protein Homology CDS 93358 93861 . - 0 ID=cds-WP_014614105.1;Parent=gene-CYJ01_RS00410;Dbxref=GenBank:WP_014614105.1;Name=WP_014614105.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=CYJ01_RS00410;product=ribosome maturation factor RimM;protein_id=WP_014614105.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 94184 94459 . - . ID=gene-CYJ01_RS00415;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CYJ01_RS00415;old_locus_tag=CYJ01_00415 NZ_PJUR01000001.1 Protein Homology CDS 94184 94459 . - 0 ID=cds-WP_014614106.1;Parent=gene-CYJ01_RS00415;Dbxref=GenBank:WP_014614106.1;Name=WP_014614106.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=CYJ01_RS00415;product=30S ribosomal protein S16;protein_id=WP_014614106.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 94673 95344 . - . ID=gene-CYJ01_RS00420;Name=CYJ01_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00420;old_locus_tag=CYJ01_00420 NZ_PJUR01000001.1 Protein Homology CDS 94673 95344 . - 0 ID=cds-WP_037543191.1;Parent=gene-CYJ01_RS00420;Dbxref=GenBank:WP_037543191.1;Name=WP_037543191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165892.1;locus_tag=CYJ01_RS00420;product=hypothetical protein;protein_id=WP_037543191.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 95446 96711 . - . ID=gene-CYJ01_RS00425;Name=CYJ01_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00425;old_locus_tag=CYJ01_00425 NZ_PJUR01000001.1 Protein Homology CDS 95446 96711 . - 0 ID=cds-WP_037543193.1;Parent=gene-CYJ01_RS00425;Dbxref=GenBank:WP_037543193.1;Name=WP_037543193.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449171.1;locus_tag=CYJ01_RS00425;product=restriction endonuclease subunit S;protein_id=WP_037543193.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 96704 98260 . - . ID=gene-CYJ01_RS00430;Name=CYJ01_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00430;old_locus_tag=CYJ01_00430 NZ_PJUR01000001.1 Protein Homology CDS 96704 98260 . - 0 ID=cds-WP_096535770.1;Parent=gene-CYJ01_RS00430;Dbxref=GenBank:WP_096535770.1;Name=WP_096535770.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028656.1;locus_tag=CYJ01_RS00430;product=type I restriction-modification system subunit M;protein_id=WP_096535770.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 98704 101496 . - . ID=gene-CYJ01_RS00435;Name=CYJ01_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00435;old_locus_tag=CYJ01_00435 NZ_PJUR01000001.1 Protein Homology CDS 98704 101496 . - 0 ID=cds-WP_101431381.1;Parent=gene-CYJ01_RS00435;Dbxref=GenBank:WP_101431381.1;Name=WP_101431381.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511775.1;locus_tag=CYJ01_RS00435;product=type I restriction endonuclease subunit R;protein_id=WP_101431381.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 102288 103478 . - . ID=gene-CYJ01_RS00440;Name=CYJ01_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00440;old_locus_tag=CYJ01_00440 NZ_PJUR01000001.1 Protein Homology CDS 102288 103478 . - 0 ID=cds-WP_101457078.1;Parent=gene-CYJ01_RS00440;Dbxref=GenBank:WP_101457078.1;Name=WP_101457078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729027.1;locus_tag=CYJ01_RS00440;product=MFS transporter;protein_id=WP_101457078.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 103661 104869 . - . ID=gene-CYJ01_RS00445;Name=CYJ01_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00445;old_locus_tag=CYJ01_00445 NZ_PJUR01000001.1 Protein Homology CDS 103661 104869 . - 0 ID=cds-WP_101431712.1;Parent=gene-CYJ01_RS00445;Dbxref=GenBank:WP_101431712.1;Name=WP_101431712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614110.1;locus_tag=CYJ01_RS00445;product=MFS transporter;protein_id=WP_101431712.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 105203 105661 . - . ID=gene-CYJ01_RS12060;Name=CYJ01_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12060 NZ_PJUR01000001.1 GeneMarkS-2+ CDS 105203 105661 . - 0 ID=cds-WP_198586556.1;Parent=gene-CYJ01_RS12060;Dbxref=GenBank:WP_198586556.1;Name=WP_198586556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12060;product=hypothetical protein;protein_id=WP_198586556.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 105739 105864 . - . ID=gene-CYJ01_RS12390;Name=CYJ01_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12390 NZ_PJUR01000001.1 GeneMarkS-2+ CDS 105739 105864 . - 0 ID=cds-WP_257975747.1;Parent=gene-CYJ01_RS12390;Dbxref=GenBank:WP_257975747.1;Name=WP_257975747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12390;product=hypothetical protein;protein_id=WP_257975747.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 105888 106469 . - . ID=gene-CYJ01_RS00455;Name=CYJ01_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00455;old_locus_tag=CYJ01_00455 NZ_PJUR01000001.1 Protein Homology CDS 105888 106469 . - 0 ID=cds-WP_101457079.1;Parent=gene-CYJ01_RS00455;Dbxref=GenBank:WP_101457079.1;Name=WP_101457079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220298.1;locus_tag=CYJ01_RS00455;product=hypothetical protein;protein_id=WP_101457079.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 106447 107013 . - . ID=gene-CYJ01_RS00460;Name=CYJ01_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00460;old_locus_tag=CYJ01_00460 NZ_PJUR01000001.1 Protein Homology CDS 106447 107013 . - 0 ID=cds-WP_101431710.1;Parent=gene-CYJ01_RS00460;Dbxref=GenBank:WP_101431710.1;Name=WP_101431710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614113.1;locus_tag=CYJ01_RS00460;product=CYTH domain-containing protein;protein_id=WP_101431710.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 107028 107681 . - . ID=gene-CYJ01_RS00465;Name=CYJ01_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00465;old_locus_tag=CYJ01_00465 NZ_PJUR01000001.1 GeneMarkS-2+ CDS 107028 107681 . - 0 ID=cds-WP_101457080.1;Parent=gene-CYJ01_RS00465;Dbxref=GenBank:WP_101457080.1;Name=WP_101457080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS00465;product=GTP 3'%2C8-cyclase MoaA family protein;protein_id=WP_101457080.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 108323 109177 . + . ID=gene-CYJ01_RS00470;Name=CYJ01_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00470;old_locus_tag=CYJ01_00470 NZ_PJUR01000001.1 Protein Homology CDS 108323 109177 . + 0 ID=cds-WP_101431709.1;Parent=gene-CYJ01_RS00470;Dbxref=GenBank:WP_101431709.1;Name=WP_101431709.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614116.1;locus_tag=CYJ01_RS00470;product=helix-turn-helix domain-containing protein;protein_id=WP_101431709.1;transl_table=11 NZ_PJUR01000001.1 RefSeq pseudogene 109260 109442 . + . ID=gene-CYJ01_RS12445;Name=CYJ01_RS12445;end_range=109442,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12445;partial=true;pseudo=true;start_range=.,109260 NZ_PJUR01000001.1 Protein Homology CDS 109260 109442 . + 0 ID=cds-CYJ01_RS12445;Parent=gene-CYJ01_RS12445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=109442,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_336253575.1;locus_tag=CYJ01_RS12445;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,109260;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 110355 111722 . - . ID=gene-CYJ01_RS00480;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CYJ01_RS00480;old_locus_tag=CYJ01_00480 NZ_PJUR01000001.1 Protein Homology CDS 110355 111722 . - 0 ID=cds-WP_101457082.1;Parent=gene-CYJ01_RS00480;Dbxref=GenBank:WP_101457082.1;Name=WP_101457082.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CYJ01_RS00480;product=signal recognition particle protein;protein_id=WP_101457082.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 111736 112071 . - . ID=gene-CYJ01_RS00485;Name=CYJ01_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00485;old_locus_tag=CYJ01_00485 NZ_PJUR01000001.1 Protein Homology CDS 111736 112071 . - 0 ID=cds-WP_014614119.1;Parent=gene-CYJ01_RS00485;Dbxref=GenBank:WP_014614119.1;Name=WP_014614119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614119.1;locus_tag=CYJ01_RS00485;product=putative DNA-binding protein;protein_id=WP_014614119.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 112075 113274 . - . ID=gene-CYJ01_RS00490;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CYJ01_RS00490;old_locus_tag=CYJ01_00490 NZ_PJUR01000001.1 Protein Homology CDS 112075 113274 . - 0 ID=cds-WP_014614120.1;Parent=gene-CYJ01_RS00490;Dbxref=GenBank:WP_014614120.1;Name=WP_014614120.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614120.1;locus_tag=CYJ01_RS00490;product=signal recognition particle-docking protein FtsY;protein_id=WP_014614120.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 113276 116848 . - . ID=gene-CYJ01_RS00495;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CYJ01_RS00495;old_locus_tag=CYJ01_00495 NZ_PJUR01000001.1 Protein Homology CDS 113276 116848 . - 0 ID=cds-WP_101457083.1;Parent=gene-CYJ01_RS00495;Dbxref=GenBank:WP_101457083.1;Name=WP_101457083.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=CYJ01_RS00495;product=chromosome segregation protein SMC;protein_id=WP_101457083.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 116852 117583 . - . ID=gene-CYJ01_RS00500;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CYJ01_RS00500;old_locus_tag=CYJ01_00500 NZ_PJUR01000001.1 Protein Homology CDS 116852 117583 . - 0 ID=cds-WP_014614122.1;Parent=gene-CYJ01_RS00500;Dbxref=GenBank:WP_014614122.1;Name=WP_014614122.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165652.1;locus_tag=CYJ01_RS00500;product=ribonuclease III;protein_id=WP_014614122.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 118477 118710 . - . ID=gene-CYJ01_RS00505;Name=CYJ01_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00505;old_locus_tag=CYJ01_00505 NZ_PJUR01000001.1 Protein Homology CDS 118477 118710 . - 0 ID=cds-WP_014614123.1;Parent=gene-CYJ01_RS00505;Dbxref=GenBank:WP_014614123.1;Name=WP_014614123.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CYJ01_RS00505;product=acyl carrier protein;protein_id=WP_014614123.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 118939 119676 . - . ID=gene-CYJ01_RS00510;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CYJ01_RS00510;old_locus_tag=CYJ01_00510 NZ_PJUR01000001.1 Protein Homology CDS 118939 119676 . - 0 ID=cds-WP_014614124.1;Parent=gene-CYJ01_RS00510;Dbxref=GenBank:WP_014614124.1;Name=WP_014614124.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=CYJ01_RS00510;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_014614124.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 119673 120596 . - . ID=gene-CYJ01_RS00515;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CYJ01_RS00515;old_locus_tag=CYJ01_00515 NZ_PJUR01000001.1 Protein Homology CDS 119673 120596 . - 0 ID=cds-WP_101457084.1;Parent=gene-CYJ01_RS00515;Dbxref=GenBank:WP_101457084.1;Name=WP_101457084.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424881.1;locus_tag=CYJ01_RS00515;product=ACP S-malonyltransferase;protein_id=WP_101457084.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 120589 121575 . - . ID=gene-CYJ01_RS00520;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CYJ01_RS00520;old_locus_tag=CYJ01_00520 NZ_PJUR01000001.1 Protein Homology CDS 120589 121575 . - 0 ID=cds-WP_015729017.1;Parent=gene-CYJ01_RS00520;Dbxref=GenBank:WP_015729017.1;Name=WP_015729017.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729017.1;locus_tag=CYJ01_RS00520;product=phosphate acyltransferase PlsX;protein_id=WP_015729017.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 121577 122137 . - . ID=gene-CYJ01_RS00525;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=CYJ01_RS00525;old_locus_tag=CYJ01_00525 NZ_PJUR01000001.1 Protein Homology CDS 121577 122137 . - 0 ID=cds-WP_026066989.1;Parent=gene-CYJ01_RS00525;Dbxref=GenBank:WP_026066989.1;Name=WP_026066989.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275971.1;locus_tag=CYJ01_RS00525;product=transcription factor FapR;protein_id=WP_026066989.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 122264 124309 . - . ID=gene-CYJ01_RS00530;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CYJ01_RS00530;old_locus_tag=CYJ01_00530 NZ_PJUR01000001.1 Protein Homology CDS 122264 124309 . - 0 ID=cds-WP_014614128.1;Parent=gene-CYJ01_RS00530;Dbxref=GenBank:WP_014614128.1;Name=WP_014614128.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CYJ01_RS00530;product=ATP-dependent DNA helicase RecG;protein_id=WP_014614128.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 124312 125181 . - . ID=gene-CYJ01_RS00535;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00535;old_locus_tag=CYJ01_00535 NZ_PJUR01000001.1 Protein Homology CDS 124312 125181 . - 0 ID=cds-WP_031254141.1;Parent=gene-CYJ01_RS00535;Dbxref=GenBank:WP_031254141.1;Name=WP_031254141.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=CYJ01_RS00535;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_031254141.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 125200 125865 . - . ID=gene-CYJ01_RS00540;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00540;old_locus_tag=CYJ01_00540 NZ_PJUR01000001.1 Protein Homology CDS 125200 125865 . - 0 ID=cds-WP_014614130.1;Parent=gene-CYJ01_RS00540;Dbxref=GenBank:WP_014614130.1;Name=WP_014614130.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614130.1;locus_tag=CYJ01_RS00540;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_014614130.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 126817 128481 . - . ID=gene-CYJ01_RS00545;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00545;old_locus_tag=CYJ01_00545 NZ_PJUR01000001.1 Protein Homology CDS 126817 128481 . - 0 ID=cds-WP_014614131.1;Parent=gene-CYJ01_RS00545;Dbxref=GenBank:WP_014614131.1;Name=WP_014614131.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303292.1;locus_tag=CYJ01_RS00545;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_014614131.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 128494 128868 . - . ID=gene-CYJ01_RS00550;Name=CYJ01_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00550;old_locus_tag=CYJ01_00550 NZ_PJUR01000001.1 Protein Homology CDS 128494 128868 . - 0 ID=cds-WP_014614132.1;Parent=gene-CYJ01_RS00550;Dbxref=GenBank:WP_014614132.1;Name=WP_014614132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=CYJ01_RS00550;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014614132.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 129201 129389 . + . ID=gene-CYJ01_RS00555;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00555;old_locus_tag=CYJ01_00555 NZ_PJUR01000001.1 Protein Homology CDS 129201 129389 . + 0 ID=cds-WP_014614133.1;Parent=gene-CYJ01_RS00555;Dbxref=GenBank:WP_014614133.1;Name=WP_014614133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CYJ01_RS00555;product=50S ribosomal protein L28;protein_id=WP_014614133.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 129460 130101 . - . ID=gene-CYJ01_RS00560;Name=CYJ01_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00560;old_locus_tag=CYJ01_00560 NZ_PJUR01000001.1 Protein Homology CDS 129460 130101 . - 0 ID=cds-WP_014614134.1;Parent=gene-CYJ01_RS00560;Dbxref=GenBank:WP_014614134.1;Name=WP_014614134.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614134.1;locus_tag=CYJ01_RS00560;product=thiamine diphosphokinase;protein_id=WP_014614134.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 130101 130751 . - . ID=gene-CYJ01_RS00565;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CYJ01_RS00565;old_locus_tag=CYJ01_00565 NZ_PJUR01000001.1 Protein Homology CDS 130101 130751 . - 0 ID=cds-WP_014614135.1;Parent=gene-CYJ01_RS00565;Dbxref=GenBank:WP_014614135.1;Name=WP_014614135.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=CYJ01_RS00565;product=ribulose-phosphate 3-epimerase;protein_id=WP_014614135.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 130751 131626 . - . ID=gene-CYJ01_RS00570;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00570;old_locus_tag=CYJ01_00570 NZ_PJUR01000001.1 Protein Homology CDS 130751 131626 . - 0 ID=cds-WP_014614136.1;Parent=gene-CYJ01_RS00570;Dbxref=GenBank:WP_014614136.1;Name=WP_014614136.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=CYJ01_RS00570;product=ribosome small subunit-dependent GTPase A;protein_id=WP_014614136.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 131808 133076 . - . ID=gene-CYJ01_RS00575;Name=CYJ01_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00575;old_locus_tag=CYJ01_00575 NZ_PJUR01000001.1 Protein Homology CDS 131808 133076 . - 0 ID=cds-WP_014614137.1;Parent=gene-CYJ01_RS00575;Dbxref=GenBank:WP_014614137.1;Name=WP_014614137.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614137.1;locus_tag=CYJ01_RS00575;product=cytochrome P450;protein_id=WP_014614137.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 133836 135842 . - . ID=gene-CYJ01_RS00580;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00580;old_locus_tag=CYJ01_00580 NZ_PJUR01000001.1 Protein Homology CDS 133836 135842 . - 0 ID=cds-WP_100006722.1;Parent=gene-CYJ01_RS00580;Dbxref=GenBank:WP_100006722.1;Name=WP_100006722.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729014.1;locus_tag=CYJ01_RS00580;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_100006722.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 135839 136582 . - . ID=gene-CYJ01_RS00585;Name=CYJ01_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00585;old_locus_tag=CYJ01_00585 NZ_PJUR01000001.1 Protein Homology CDS 135839 136582 . - 0 ID=cds-WP_014614139.1;Parent=gene-CYJ01_RS00585;Dbxref=GenBank:WP_014614139.1;Name=WP_014614139.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=CYJ01_RS00585;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_014614139.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 136589 137683 . - . ID=gene-CYJ01_RS00590;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=CYJ01_RS00590;old_locus_tag=CYJ01_00590 NZ_PJUR01000001.1 Protein Homology CDS 136589 137683 . - 0 ID=cds-WP_014614140.1;Parent=gene-CYJ01_RS00590;Dbxref=GenBank:WP_014614140.1;Name=WP_014614140.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CYJ01_RS00590;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_014614140.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 137689 138990 . - . ID=gene-CYJ01_RS00595;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00595;old_locus_tag=CYJ01_00595 NZ_PJUR01000001.1 Protein Homology CDS 137689 138990 . - 0 ID=cds-WP_101457085.1;Parent=gene-CYJ01_RS00595;Dbxref=GenBank:WP_101457085.1;Name=WP_101457085.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614141.1;locus_tag=CYJ01_RS00595;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_101457085.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 138991 139923 . - . ID=gene-CYJ01_RS00600;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CYJ01_RS00600;old_locus_tag=CYJ01_00600 NZ_PJUR01000001.1 Protein Homology CDS 138991 139923 . - 0 ID=cds-WP_065354398.1;Parent=gene-CYJ01_RS00600;Dbxref=GenBank:WP_065354398.1;Name=WP_065354398.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=CYJ01_RS00600;product=methionyl-tRNA formyltransferase;protein_id=WP_065354398.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 139916 140401 . - . ID=gene-CYJ01_RS00605;Name=CYJ01_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00605;old_locus_tag=CYJ01_00605 NZ_PJUR01000001.1 Protein Homology CDS 139916 140401 . - 0 ID=cds-WP_014614143.1;Parent=gene-CYJ01_RS00605;Dbxref=GenBank:WP_014614143.1;Name=WP_014614143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614143.1;locus_tag=CYJ01_RS00605;product=peptide deformylase;protein_id=WP_014614143.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 140658 143066 . - . ID=gene-CYJ01_RS00610;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00610;old_locus_tag=CYJ01_00610 NZ_PJUR01000001.1 Protein Homology CDS 140658 143066 . - 0 ID=cds-WP_014614144.1;Parent=gene-CYJ01_RS00610;Dbxref=GenBank:WP_014614144.1;Name=WP_014614144.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560866.1;locus_tag=CYJ01_RS00610;product=primosomal protein N';protein_id=WP_014614144.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 143063 144268 . - . ID=gene-CYJ01_RS00615;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00615;old_locus_tag=CYJ01_00615 NZ_PJUR01000001.1 Protein Homology CDS 143063 144268 . - 0 ID=cds-WP_041613233.1;Parent=gene-CYJ01_RS00615;Dbxref=GenBank:WP_041613233.1;Name=WP_041613233.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167385.1;locus_tag=CYJ01_RS00615;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_041613233.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 144573 144782 . - . ID=gene-CYJ01_RS00620;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS00620;old_locus_tag=CYJ01_00620 NZ_PJUR01000001.1 Protein Homology CDS 144573 144782 . - 0 ID=cds-WP_014614146.1;Parent=gene-CYJ01_RS00620;Dbxref=GenBank:WP_014614146.1;Name=WP_014614146.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=CYJ01_RS00620;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_014614146.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 144782 145405 . - . ID=gene-CYJ01_RS00625;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CYJ01_RS00625;old_locus_tag=CYJ01_00625 NZ_PJUR01000001.1 Protein Homology CDS 144782 145405 . - 0 ID=cds-WP_014614147.1;Parent=gene-CYJ01_RS00625;Dbxref=GenBank:WP_014614147.1;Name=WP_014614147.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=CYJ01_RS00625;product=guanylate kinase;protein_id=WP_014614147.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 145565 147268 . + . ID=gene-CYJ01_RS00630;Name=CYJ01_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00630;old_locus_tag=CYJ01_00630 NZ_PJUR01000001.1 Protein Homology CDS 145565 147268 . + 0 ID=cds-WP_101431284.1;Parent=gene-CYJ01_RS00630;Dbxref=GenBank:WP_101431284.1;Name=WP_101431284.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729006.1;locus_tag=CYJ01_RS00630;product=Rqc2 family fibronectin-binding protein;protein_id=WP_101431284.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 147352 147765 . - . ID=gene-CYJ01_RS00635;Name=CYJ01_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00635;old_locus_tag=CYJ01_00635 NZ_PJUR01000001.1 Protein Homology CDS 147352 147765 . - 0 ID=cds-WP_014614149.1;Parent=gene-CYJ01_RS00635;Dbxref=GenBank:WP_014614149.1;Name=WP_014614149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=CYJ01_RS00635;product=VOC family protein;protein_id=WP_014614149.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 148200 148808 . - . ID=gene-CYJ01_RS00640;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CYJ01_RS00640;old_locus_tag=CYJ01_00640 NZ_PJUR01000001.1 Protein Homology CDS 148200 148808 . - 0 ID=cds-WP_015729005.1;Parent=gene-CYJ01_RS00640;Dbxref=GenBank:WP_015729005.1;Name=WP_015729005.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=CYJ01_RS00640;product=orotate phosphoribosyltransferase;protein_id=WP_015729005.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 148796 149500 . - . ID=gene-CYJ01_RS00645;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CYJ01_RS00645;old_locus_tag=CYJ01_00645 NZ_PJUR01000001.1 Protein Homology CDS 148796 149500 . - 0 ID=cds-WP_101431283.1;Parent=gene-CYJ01_RS00645;Dbxref=GenBank:WP_101431283.1;Name=WP_101431283.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614151.1;locus_tag=CYJ01_RS00645;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_101431283.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 149502 150422 . - . ID=gene-CYJ01_RS00650;Name=CYJ01_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00650;old_locus_tag=CYJ01_00650 NZ_PJUR01000001.1 Protein Homology CDS 149502 150422 . - 0 ID=cds-WP_014614152.1;Parent=gene-CYJ01_RS00650;Dbxref=GenBank:WP_014614152.1;Name=WP_014614152.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=CYJ01_RS00650;product=dihydroorotate dehydrogenase;protein_id=WP_014614152.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 150419 151183 . - . ID=gene-CYJ01_RS00655;Name=CYJ01_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00655;old_locus_tag=CYJ01_00655 NZ_PJUR01000001.1 Protein Homology CDS 150419 151183 . - 0 ID=cds-WP_014614153.1;Parent=gene-CYJ01_RS00655;Dbxref=GenBank:WP_014614153.1;Name=WP_014614153.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=CYJ01_RS00655;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_014614153.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 151197 154370 . - . ID=gene-CYJ01_RS00660;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00660;old_locus_tag=CYJ01_00660 NZ_PJUR01000001.1 Protein Homology CDS 151197 154370 . - 0 ID=cds-WP_014614154.1;Parent=gene-CYJ01_RS00660;Dbxref=GenBank:WP_014614154.1;Name=WP_014614154.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=CYJ01_RS00660;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_014614154.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 154363 155463 . - . ID=gene-CYJ01_RS00665;Name=CYJ01_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00665;old_locus_tag=CYJ01_00665 NZ_PJUR01000001.1 Protein Homology CDS 154363 155463 . - 0 ID=cds-WP_014614155.1;Parent=gene-CYJ01_RS00665;Dbxref=GenBank:WP_014614155.1;Name=WP_014614155.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=CYJ01_RS00665;product=carbamoyl phosphate synthase small subunit;protein_id=WP_014614155.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 155466 156740 . - . ID=gene-CYJ01_RS00670;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00670;old_locus_tag=CYJ01_00670 NZ_PJUR01000001.1 Protein Homology CDS 155466 156740 . - 0 ID=cds-WP_037544242.1;Parent=gene-CYJ01_RS00670;Dbxref=GenBank:WP_037544242.1;Name=WP_037544242.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=CYJ01_RS00670;product=dihydroorotase;protein_id=WP_037544242.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 156756 157634 . - . ID=gene-CYJ01_RS00675;Name=CYJ01_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00675;old_locus_tag=CYJ01_00675 NZ_PJUR01000001.1 Protein Homology CDS 156756 157634 . - 0 ID=cds-WP_014614157.1;Parent=gene-CYJ01_RS00675;Dbxref=GenBank:WP_014614157.1;Name=WP_014614157.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614157.1;locus_tag=CYJ01_RS00675;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014614157.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 157656 158948 . - . ID=gene-CYJ01_RS00680;Name=CYJ01_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00680;old_locus_tag=CYJ01_00680 NZ_PJUR01000001.1 Protein Homology CDS 157656 158948 . - 0 ID=cds-WP_101457086.1;Parent=gene-CYJ01_RS00680;Dbxref=GenBank:WP_101457086.1;Name=WP_101457086.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165552.1;locus_tag=CYJ01_RS00680;product=uracil-xanthine permease family protein;protein_id=WP_101457086.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 159126 159650 . - . ID=gene-CYJ01_RS00685;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=CYJ01_RS00685;old_locus_tag=CYJ01_00685 NZ_PJUR01000001.1 Protein Homology CDS 159126 159650 . - 0 ID=cds-WP_014614159.1;Parent=gene-CYJ01_RS00685;Dbxref=GenBank:WP_014614159.1;Name=WP_014614159.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830167.1;locus_tag=CYJ01_RS00685;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_014614159.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 159936 160853 . - . ID=gene-CYJ01_RS00690;Name=CYJ01_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00690;old_locus_tag=CYJ01_00690 NZ_PJUR01000001.1 Protein Homology CDS 159936 160853 . - 0 ID=cds-WP_015729003.1;Parent=gene-CYJ01_RS00690;Dbxref=GenBank:WP_015729003.1;Name=WP_015729003.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614160.1;locus_tag=CYJ01_RS00690;product=RluA family pseudouridine synthase;protein_id=WP_015729003.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 160853 161338 . - . ID=gene-CYJ01_RS00695;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00695;old_locus_tag=CYJ01_00695 NZ_PJUR01000001.1 Protein Homology CDS 160853 161338 . - 0 ID=cds-WP_014614161.1;Parent=gene-CYJ01_RS00695;Dbxref=GenBank:WP_014614161.1;Name=WP_014614161.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=CYJ01_RS00695;product=signal peptidase II;protein_id=WP_014614161.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 161592 164339 . - . ID=gene-CYJ01_RS00700;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CYJ01_RS00700;old_locus_tag=CYJ01_00700 NZ_PJUR01000001.1 Protein Homology CDS 161592 164339 . - 0 ID=cds-WP_014614162.1;Parent=gene-CYJ01_RS00700;Dbxref=GenBank:WP_014614162.1;Name=WP_014614162.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=CYJ01_RS00700;product=isoleucine--tRNA ligase;protein_id=WP_014614162.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 164540 165139 . - . ID=gene-CYJ01_RS00705;Name=CYJ01_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00705;old_locus_tag=CYJ01_00705 NZ_PJUR01000001.1 Protein Homology CDS 164540 165139 . - 0 ID=cds-WP_063278831.1;Parent=gene-CYJ01_RS00705;Dbxref=GenBank:WP_063278831.1;Name=WP_063278831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166536.1;locus_tag=CYJ01_RS00705;product=DivIVA domain-containing protein;protein_id=WP_063278831.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 165163 165933 . - . ID=gene-CYJ01_RS00710;Name=CYJ01_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00710;old_locus_tag=CYJ01_00710 NZ_PJUR01000001.1 Protein Homology CDS 165163 165933 . - 0 ID=cds-WP_063278832.1;Parent=gene-CYJ01_RS00710;Dbxref=GenBank:WP_063278832.1;Name=WP_063278832.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=CYJ01_RS00710;product=YlmH family RNA-binding protein;protein_id=WP_063278832.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 166289 166738 . - . ID=gene-CYJ01_RS00720;Name=CYJ01_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00720;old_locus_tag=CYJ01_00720 NZ_PJUR01000001.1 Protein Homology CDS 166289 166738 . - 0 ID=cds-WP_014614167.1;Parent=gene-CYJ01_RS00720;Dbxref=GenBank:WP_014614167.1;Name=WP_014614167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614167.1;locus_tag=CYJ01_RS00720;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_014614167.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 166757 168298 . - . ID=gene-CYJ01_RS00725;Name=CYJ01_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00725;old_locus_tag=CYJ01_00725 NZ_PJUR01000001.1 Protein Homology CDS 166757 168298 . - 0 ID=cds-WP_101457087.1;Parent=gene-CYJ01_RS00725;Dbxref=GenBank:WP_101457087.1;Name=WP_101457087.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614168.1;locus_tag=CYJ01_RS00725;product=sodium:solute symporter family protein;protein_id=WP_101457087.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 168326 169249 . - . ID=gene-CYJ01_RS00730;Name=CYJ01_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00730;old_locus_tag=CYJ01_00730 NZ_PJUR01000001.1 Protein Homology CDS 168326 169249 . - 0 ID=cds-WP_101457088.1;Parent=gene-CYJ01_RS00730;Dbxref=GenBank:WP_101457088.1;Name=WP_101457088.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165656.1;locus_tag=CYJ01_RS00730;product=dihydrodipicolinate synthase family protein;protein_id=WP_101457088.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 169346 170173 . - . ID=gene-CYJ01_RS00735;Name=CYJ01_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00735;old_locus_tag=CYJ01_00735 NZ_PJUR01000001.1 Protein Homology CDS 169346 170173 . - 0 ID=cds-WP_101457089.1;Parent=gene-CYJ01_RS00735;Dbxref=GenBank:WP_101457089.1;Name=WP_101457089.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614170.1;locus_tag=CYJ01_RS00735;product=MurR/RpiR family transcriptional regulator;protein_id=WP_101457089.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 170530 171411 . + . ID=gene-CYJ01_RS00740;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=CYJ01_RS00740;old_locus_tag=CYJ01_00740 NZ_PJUR01000001.1 Protein Homology CDS 170530 171411 . + 0 ID=cds-WP_014614171.1;Parent=gene-CYJ01_RS00740;Dbxref=GenBank:WP_014614171.1;Name=WP_014614171.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CYJ01_RS00740;product=ribose/proton symporter RbsU;protein_id=WP_014614171.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 171430 171834 . + . ID=gene-CYJ01_RS00745;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CYJ01_RS00745;old_locus_tag=CYJ01_00745 NZ_PJUR01000001.1 Protein Homology CDS 171430 171834 . + 0 ID=cds-WP_063278833.1;Parent=gene-CYJ01_RS00745;Dbxref=GenBank:WP_063278833.1;Name=WP_063278833.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=CYJ01_RS00745;product=D-ribose pyranase;protein_id=WP_063278833.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 172066 172359 . - . ID=gene-CYJ01_RS00750;Name=CYJ01_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00750;old_locus_tag=CYJ01_00750 NZ_PJUR01000001.1 Protein Homology CDS 172066 172359 . - 0 ID=cds-WP_015728996.1;Parent=gene-CYJ01_RS00750;Dbxref=GenBank:WP_015728996.1;Name=WP_015728996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=CYJ01_RS00750;product=YggT family protein;protein_id=WP_015728996.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 172371 172931 . - . ID=gene-CYJ01_RS00755;Name=CYJ01_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00755;old_locus_tag=CYJ01_00755 NZ_PJUR01000001.1 Protein Homology CDS 172371 172931 . - 0 ID=cds-WP_014614174.1;Parent=gene-CYJ01_RS00755;Dbxref=GenBank:WP_014614174.1;Name=WP_014614174.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=CYJ01_RS00755;product=cell division protein SepF;protein_id=WP_014614174.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 172937 173611 . - . ID=gene-CYJ01_RS00760;Name=CYJ01_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00760;old_locus_tag=CYJ01_00760 NZ_PJUR01000001.1 Protein Homology CDS 172937 173611 . - 0 ID=cds-WP_014614175.1;Parent=gene-CYJ01_RS00760;Dbxref=GenBank:WP_014614175.1;Name=WP_014614175.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263997.1;locus_tag=CYJ01_RS00760;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_014614175.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 173612 174424 . - . ID=gene-CYJ01_RS00765;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=CYJ01_RS00765;old_locus_tag=CYJ01_00765 NZ_PJUR01000001.1 Protein Homology CDS 173612 174424 . - 0 ID=cds-WP_096548635.1;Parent=gene-CYJ01_RS00765;Dbxref=GenBank:WP_096548635.1;Name=WP_096548635.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=CYJ01_RS00765;product=peptidoglycan editing factor PgeF;protein_id=WP_096548635.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 174578 175750 . - . ID=gene-CYJ01_RS00770;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS00770;old_locus_tag=CYJ01_00770 NZ_PJUR01000001.1 Protein Homology CDS 174578 175750 . - 0 ID=cds-WP_014614177.1;Parent=gene-CYJ01_RS00770;Dbxref=GenBank:WP_014614177.1;Name=WP_014614177.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169110.1;locus_tag=CYJ01_RS00770;product=cell division protein FtsZ;protein_id=WP_014614177.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 175780 177180 . - . ID=gene-CYJ01_RS00775;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00775;old_locus_tag=CYJ01_00775 NZ_PJUR01000001.1 Protein Homology CDS 175780 177180 . - 0 ID=cds-WP_101457090.1;Parent=gene-CYJ01_RS00775;Dbxref=GenBank:WP_101457090.1;Name=WP_101457090.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=CYJ01_RS00775;product=cell division protein FtsA;protein_id=WP_101457090.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 177396 178286 . - . ID=gene-CYJ01_RS00780;Name=CYJ01_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00780;old_locus_tag=CYJ01_00780 NZ_PJUR01000001.1 Protein Homology CDS 177396 178286 . - 0 ID=cds-WP_014614179.1;Parent=gene-CYJ01_RS00780;Dbxref=GenBank:WP_014614179.1;Name=WP_014614179.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165664.1;locus_tag=CYJ01_RS00780;product=cell division protein FtsQ/DivIB;protein_id=WP_014614179.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 178302 179651 . - . ID=gene-CYJ01_RS00785;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CYJ01_RS00785;old_locus_tag=CYJ01_00785 NZ_PJUR01000001.1 Protein Homology CDS 178302 179651 . - 0 ID=cds-WP_014614180.1;Parent=gene-CYJ01_RS00785;Dbxref=GenBank:WP_014614180.1;Name=WP_014614180.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=CYJ01_RS00785;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_014614180.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 179652 180617 . - . ID=gene-CYJ01_RS00790;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CYJ01_RS00790;old_locus_tag=CYJ01_00790 NZ_PJUR01000001.1 Protein Homology CDS 179652 180617 . - 0 ID=cds-WP_015728992.1;Parent=gene-CYJ01_RS00790;Dbxref=GenBank:WP_015728992.1;Name=WP_015728992.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276018.1;locus_tag=CYJ01_RS00790;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_015728992.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 180817 182970 . - . ID=gene-CYJ01_RS00795;Name=CYJ01_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00795;old_locus_tag=CYJ01_00795 NZ_PJUR01000001.1 Protein Homology CDS 180817 182970 . - 0 ID=cds-WP_096535795.1;Parent=gene-CYJ01_RS00795;Dbxref=GenBank:WP_096535795.1;Name=WP_096535795.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614183.1;locus_tag=CYJ01_RS00795;product=penicillin-binding protein;protein_id=WP_096535795.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 182951 183337 . - . ID=gene-CYJ01_RS00800;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CYJ01_RS00800;old_locus_tag=CYJ01_00800 NZ_PJUR01000001.1 Protein Homology CDS 182951 183337 . - 0 ID=cds-WP_014614184.1;Parent=gene-CYJ01_RS00800;Dbxref=GenBank:WP_014614184.1;Name=WP_014614184.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446224.1;locus_tag=CYJ01_RS00800;product=cell division protein FtsL;protein_id=WP_014614184.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 183356 184291 . - . ID=gene-CYJ01_RS00805;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CYJ01_RS00805;old_locus_tag=CYJ01_00805 NZ_PJUR01000001.1 Protein Homology CDS 183356 184291 . - 0 ID=cds-WP_063284588.1;Parent=gene-CYJ01_RS00805;Dbxref=GenBank:WP_063284588.1;Name=WP_063284588.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CYJ01_RS00805;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_063284588.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 184309 184740 . - . ID=gene-CYJ01_RS00810;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS00810;old_locus_tag=CYJ01_00810 NZ_PJUR01000001.1 Protein Homology CDS 184309 184740 . - 0 ID=cds-WP_014614186.1;Parent=gene-CYJ01_RS00810;Dbxref=GenBank:WP_014614186.1;Name=WP_014614186.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CYJ01_RS00810;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014614186.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 184887 186500 . - . ID=gene-CYJ01_RS00815;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00815;old_locus_tag=CYJ01_00815 NZ_PJUR01000001.1 Protein Homology CDS 184887 186500 . - 0 ID=cds-WP_065520537.1;Parent=gene-CYJ01_RS00815;Dbxref=GenBank:WP_065520537.1;Name=WP_065520537.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165669.1;locus_tag=CYJ01_RS00815;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_065520537.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 186632 187081 . + . ID=gene-CYJ01_RS00820;Name=CYJ01_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00820;old_locus_tag=CYJ01_00820 NZ_PJUR01000001.1 Protein Homology CDS 186632 187081 . + 0 ID=cds-WP_014614188.1;Parent=gene-CYJ01_RS00820;Dbxref=GenBank:WP_014614188.1;Name=WP_014614188.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614188.1;locus_tag=CYJ01_RS00820;product=N-acetyltransferase;protein_id=WP_014614188.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 187271 187957 . - . ID=gene-CYJ01_RS00825;Name=CYJ01_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00825;old_locus_tag=CYJ01_00825 NZ_PJUR01000001.1 Protein Homology CDS 187271 187957 . - 0 ID=cds-WP_014614189.1;Parent=gene-CYJ01_RS00825;Dbxref=GenBank:WP_014614189.1;Name=WP_014614189.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728988.1;locus_tag=CYJ01_RS00825;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_014614189.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 188271 188402 . - . ID=gene-CYJ01_RS00830;Name=CYJ01_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00830;old_locus_tag=CYJ01_00830 NZ_PJUR01000001.1 Protein Homology CDS 188271 188402 . - 0 ID=cds-WP_014614190.1;Parent=gene-CYJ01_RS00830;Dbxref=GenBank:WP_014614190.1;Name=WP_014614190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=CYJ01_RS00830;product=beta-class phenol-soluble modulin;protein_id=WP_014614190.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 188837 188905 . + . ID=gene-CYJ01_RS12450;Name=CYJ01_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12450 NZ_PJUR01000001.1 Protein Homology CDS 188837 188905 . + 0 ID=cds-WP_224398680.1;Parent=gene-CYJ01_RS12450;Dbxref=GenBank:WP_224398680.1;Name=WP_224398680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=CYJ01_RS12450;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_224398680.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 189291 190595 . + . ID=gene-CYJ01_RS00840;Name=CYJ01_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00840;old_locus_tag=CYJ01_00840 NZ_PJUR01000001.1 Protein Homology CDS 189291 190595 . + 0 ID=cds-WP_063278836.1;Parent=gene-CYJ01_RS00840;Dbxref=GenBank:WP_063278836.1;Name=WP_063278836.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=CYJ01_RS00840;product=TrkH family potassium uptake protein;protein_id=WP_063278836.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 190719 191162 . - . ID=gene-CYJ01_RS00845;Name=CYJ01_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00845;old_locus_tag=CYJ01_00845 NZ_PJUR01000001.1 Protein Homology CDS 190719 191162 . - 0 ID=cds-WP_063278837.1;Parent=gene-CYJ01_RS00845;Dbxref=GenBank:WP_063278837.1;Name=WP_063278837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614193.1;locus_tag=CYJ01_RS00845;product=VOC family protein;protein_id=WP_063278837.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 191470 191543 . + . ID=gene-CYJ01_RS00850;Name=CYJ01_RS00850;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS00850;old_locus_tag=CYJ01_00850 NZ_PJUR01000001.1 tRNAscan-SE tRNA 191470 191543 . + . ID=rna-CYJ01_RS00850;Parent=gene-CYJ01_RS00850;anticodon=(pos:191504..191506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS00850;product=tRNA-Arg NZ_PJUR01000001.1 tRNAscan-SE exon 191470 191543 . + . ID=exon-CYJ01_RS00850-1;Parent=rna-CYJ01_RS00850;anticodon=(pos:191504..191506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS00850;product=tRNA-Arg NZ_PJUR01000001.1 RefSeq gene 191697 191900 . - . ID=gene-CYJ01_RS00855;Name=CYJ01_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00855;old_locus_tag=CYJ01_00855 NZ_PJUR01000001.1 Protein Homology CDS 191697 191900 . - 0 ID=cds-WP_099994947.1;Parent=gene-CYJ01_RS00855;Dbxref=GenBank:WP_099994947.1;Name=WP_099994947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289724.1;locus_tag=CYJ01_RS00855;product=hypothetical protein;protein_id=WP_099994947.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 192397 193620 . - . ID=gene-CYJ01_RS00860;Name=CYJ01_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00860;old_locus_tag=CYJ01_00860 NZ_PJUR01000001.1 Protein Homology CDS 192397 193620 . - 0 ID=cds-WP_101457092.1;Parent=gene-CYJ01_RS00860;Dbxref=GenBank:WP_101457092.1;Name=WP_101457092.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385010.1;locus_tag=CYJ01_RS00860;product=Fic family protein;protein_id=WP_101457092.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 193906 194310 . - . ID=gene-CYJ01_RS00865;Name=CYJ01_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00865;old_locus_tag=CYJ01_00865 NZ_PJUR01000001.1 Protein Homology CDS 193906 194310 . - 0 ID=cds-WP_101457093.1;Parent=gene-CYJ01_RS00865;Dbxref=GenBank:WP_101457093.1;Name=WP_101457093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220209.1;locus_tag=CYJ01_RS00865;product=hypothetical protein;protein_id=WP_101457093.1;transl_table=11 NZ_PJUR01000001.1 RefSeq pseudogene 194459 194674 . - . ID=gene-CYJ01_RS00870;Name=CYJ01_RS00870;end_range=194674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS00870;old_locus_tag=CYJ01_00870;partial=true;pseudo=true NZ_PJUR01000001.1 Protein Homology CDS 194459 194674 . - 0 ID=cds-CYJ01_RS00870;Parent=gene-CYJ01_RS00870;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=194674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500516.1;locus_tag=CYJ01_RS00870;partial=true;product=SH3 domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 194778 194975 . - . ID=gene-CYJ01_RS00875;Name=CYJ01_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00875;old_locus_tag=CYJ01_00875 NZ_PJUR01000001.1 Protein Homology CDS 194778 194975 . - 0 ID=cds-WP_014614194.1;Parent=gene-CYJ01_RS00875;Dbxref=GenBank:WP_014614194.1;Name=WP_014614194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614194.1;locus_tag=CYJ01_RS00875;product=hypothetical protein;protein_id=WP_014614194.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 194978 195148 . - . ID=gene-CYJ01_RS12065;Name=CYJ01_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12065 NZ_PJUR01000001.1 Protein Homology CDS 194978 195148 . - 0 ID=cds-WP_198587990.1;Parent=gene-CYJ01_RS12065;Dbxref=GenBank:WP_198587990.1;Name=WP_198587990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723194.1;locus_tag=CYJ01_RS12065;product=hypothetical protein;protein_id=WP_198587990.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 195204 195350 . - . ID=gene-CYJ01_RS12070;Name=CYJ01_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12070 NZ_PJUR01000001.1 Protein Homology CDS 195204 195350 . - 0 ID=cds-WP_198587991.1;Parent=gene-CYJ01_RS12070;Dbxref=GenBank:WP_198587991.1;Name=WP_198587991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898262.1;locus_tag=CYJ01_RS12070;product=hypothetical protein;protein_id=WP_198587991.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 195533 195853 . - . ID=gene-CYJ01_RS00880;Name=CYJ01_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00880;old_locus_tag=CYJ01_00880 NZ_PJUR01000001.1 Protein Homology CDS 195533 195853 . - 0 ID=cds-WP_101457094.1;Parent=gene-CYJ01_RS00880;Dbxref=GenBank:WP_101457094.1;Name=WP_101457094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549762.1;locus_tag=CYJ01_RS00880;product=hypothetical protein;protein_id=WP_101457094.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 195914 196051 . - . ID=gene-CYJ01_RS12555;Name=CYJ01_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12555 NZ_PJUR01000001.1 Protein Homology CDS 195914 196051 . - 0 ID=cds-WP_241731291.1;Parent=gene-CYJ01_RS12555;Dbxref=GenBank:WP_241731291.1;Name=WP_241731291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056917.1;locus_tag=CYJ01_RS12555;product=hypothetical protein;protein_id=WP_241731291.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 196116 196382 . - . ID=gene-CYJ01_RS12195;Name=CYJ01_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12195;old_locus_tag=CYJ01_00885 NZ_PJUR01000001.1 GeneMarkS-2+ CDS 196116 196382 . - 0 ID=cds-WP_133121607.1;Parent=gene-CYJ01_RS12195;Dbxref=GenBank:WP_133121607.1;Name=WP_133121607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12195;product=hypothetical protein;protein_id=WP_133121607.1;transl_table=11 NZ_PJUR01000001.1 RefSeq pseudogene 196648 197188 . - . ID=gene-CYJ01_RS00890;Name=CYJ01_RS00890;end_range=197188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS00890;old_locus_tag=CYJ01_00890;partial=true;pseudo=true NZ_PJUR01000001.1 Protein Homology CDS 196648 197188 . - 0 ID=cds-CYJ01_RS00890;Parent=gene-CYJ01_RS00890;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=197188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861038.1;locus_tag=CYJ01_RS00890;partial=true;product=CHAP domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 197268 197420 . + . ID=gene-CYJ01_RS00895;Name=CYJ01_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00895;old_locus_tag=CYJ01_00895 NZ_PJUR01000001.1 Protein Homology CDS 197268 197420 . + 0 ID=cds-WP_101457096.1;Parent=gene-CYJ01_RS00895;Dbxref=GenBank:WP_101457096.1;Name=WP_101457096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022183.7;locus_tag=CYJ01_RS00895;product=ribbon-helix-helix domain-containing protein;protein_id=WP_101457096.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 197848 197913 . + . ID=gene-CYJ01_RS12455;Name=CYJ01_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12455;old_locus_tag=CYJ01_00900 NZ_PJUR01000001.1 Protein Homology CDS 197848 197913 . + 0 ID=cds-WP_095658924.1;Parent=gene-CYJ01_RS12455;Dbxref=GenBank:WP_095658924.1;Name=WP_095658924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=CYJ01_RS12455;product=epsilon family phenol-soluble modulin;protein_id=WP_095658924.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 198105 198614 . - . ID=gene-CYJ01_RS00905;Name=CYJ01_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00905;old_locus_tag=CYJ01_00905 NZ_PJUR01000001.1 Protein Homology CDS 198105 198614 . - 0 ID=cds-WP_063284582.1;Parent=gene-CYJ01_RS00905;Dbxref=GenBank:WP_063284582.1;Name=WP_063284582.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166348.1;locus_tag=CYJ01_RS00905;product=YfcE family phosphodiesterase;protein_id=WP_063284582.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 198611 199195 . - . ID=gene-CYJ01_RS00910;Name=CYJ01_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00910;old_locus_tag=CYJ01_00910 NZ_PJUR01000001.1 Protein Homology CDS 198611 199195 . - 0 ID=cds-WP_063284581.1;Parent=gene-CYJ01_RS00910;Dbxref=GenBank:WP_063284581.1;Name=WP_063284581.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614198.1;locus_tag=CYJ01_RS00910;product=XTP/dITP diphosphatase;protein_id=WP_063284581.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 199207 200004 . - . ID=gene-CYJ01_RS00915;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=CYJ01_RS00915;old_locus_tag=CYJ01_00915 NZ_PJUR01000001.1 Protein Homology CDS 199207 200004 . - 0 ID=cds-WP_014614199.1;Parent=gene-CYJ01_RS00915;Dbxref=GenBank:WP_014614199.1;Name=WP_014614199.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166350.1;locus_tag=CYJ01_RS00915;product=glutamate racemase;protein_id=WP_014614199.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 200255 201070 . - . ID=gene-CYJ01_RS00920;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00920;old_locus_tag=CYJ01_00920 NZ_PJUR01000001.1 Protein Homology CDS 200255 201070 . - 0 ID=cds-WP_014614200.1;Parent=gene-CYJ01_RS00920;Dbxref=GenBank:WP_014614200.1;Name=WP_014614200.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365172.1;locus_tag=CYJ01_RS00920;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_014614200.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 201070 202836 . - . ID=gene-CYJ01_RS00925;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00925;old_locus_tag=CYJ01_00925 NZ_PJUR01000001.1 Protein Homology CDS 201070 202836 . - 0 ID=cds-WP_014614201.1;Parent=gene-CYJ01_RS00925;Dbxref=GenBank:WP_014614201.1;Name=WP_014614201.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=CYJ01_RS00925;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_014614201.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 202869 203480 . - . ID=gene-CYJ01_RS00930;Name=CYJ01_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00930;old_locus_tag=CYJ01_00930 NZ_PJUR01000001.1 Protein Homology CDS 202869 203480 . - 0 ID=cds-WP_014614202.1;Parent=gene-CYJ01_RS00930;Dbxref=GenBank:WP_014614202.1;Name=WP_014614202.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637638.1;locus_tag=CYJ01_RS00930;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_014614202.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 203645 205432 . - . ID=gene-CYJ01_RS00935;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00935;old_locus_tag=CYJ01_00935 NZ_PJUR01000001.1 Protein Homology CDS 203645 205432 . - 0 ID=cds-WP_101457097.1;Parent=gene-CYJ01_RS00935;Dbxref=GenBank:WP_101457097.1;Name=WP_101457097.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614203.1;locus_tag=CYJ01_RS00935;product=excinuclease ABC subunit UvrC;protein_id=WP_101457097.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 205698 206012 . - . ID=gene-CYJ01_RS00940;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00940;old_locus_tag=CYJ01_00940 NZ_PJUR01000001.1 Protein Homology CDS 205698 206012 . - 0 ID=cds-WP_096535810.1;Parent=gene-CYJ01_RS00940;Dbxref=GenBank:WP_096535810.1;Name=WP_096535810.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=CYJ01_RS00940;product=thioredoxin;protein_id=WP_096535810.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 206091 208439 . - . ID=gene-CYJ01_RS00945;Name=CYJ01_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00945;old_locus_tag=CYJ01_00945 NZ_PJUR01000001.1 Protein Homology CDS 206091 208439 . - 0 ID=cds-WP_101457098.1;Parent=gene-CYJ01_RS00945;Dbxref=GenBank:WP_101457098.1;Name=WP_101457098.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=CYJ01_RS00945;product=endonuclease MutS2;protein_id=WP_101457098.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 208455 210164 . - . ID=gene-CYJ01_RS00950;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=CYJ01_RS00950;old_locus_tag=CYJ01_00950 NZ_PJUR01000001.1 Protein Homology CDS 208455 210164 . - 0 ID=cds-WP_101457099.1;Parent=gene-CYJ01_RS00950;Dbxref=GenBank:WP_101457099.1;Name=WP_101457099.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614206.1;locus_tag=CYJ01_RS00950;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_101457099.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 210237 210758 . - . ID=gene-CYJ01_RS00955;Name=CYJ01_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00955;old_locus_tag=CYJ01_00955 NZ_PJUR01000001.1 Protein Homology CDS 210237 210758 . - 0 ID=cds-WP_101457100.1;Parent=gene-CYJ01_RS00955;Dbxref=GenBank:WP_101457100.1;Name=WP_101457100.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166358.1;locus_tag=CYJ01_RS00955;product=CvpA family protein;protein_id=WP_101457100.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 210760 211026 . - . ID=gene-CYJ01_RS00960;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CYJ01_RS00960;old_locus_tag=CYJ01_00960 NZ_PJUR01000001.1 Protein Homology CDS 210760 211026 . - 0 ID=cds-WP_014614208.1;Parent=gene-CYJ01_RS00960;Dbxref=GenBank:WP_014614208.1;Name=WP_014614208.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614208.1;locus_tag=CYJ01_RS00960;product=cell division protein ZapA;protein_id=WP_014614208.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 211169 212107 . + . ID=gene-CYJ01_RS00965;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=CYJ01_RS00965;old_locus_tag=CYJ01_00965 NZ_PJUR01000001.1 Protein Homology CDS 211169 212107 . + 0 ID=cds-WP_063278840.1;Parent=gene-CYJ01_RS00965;Dbxref=GenBank:WP_063278840.1;Name=WP_063278840.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728969.1;locus_tag=CYJ01_RS00965;product=ribonuclease HIII;protein_id=WP_063278840.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 212899 213492 . + . ID=gene-CYJ01_RS00970;Name=merB;gbkey=Gene;gene=merB;gene_biotype=protein_coding;locus_tag=CYJ01_RS00970;old_locus_tag=CYJ01_00970 NZ_PJUR01000001.1 Protein Homology CDS 212899 213492 . + 0 ID=cds-WP_168250724.1;Parent=gene-CYJ01_RS00970;Dbxref=GenBank:WP_168250724.1;Name=WP_168250724.1;Ontology_term=GO:0018836;gbkey=CDS;gene=merB;go_function=alkylmercury lyase activity|0018836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168150.1;locus_tag=CYJ01_RS00970;product=organomercurial lyase;protein_id=WP_168250724.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 213604 216009 . - . ID=gene-CYJ01_RS00975;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CYJ01_RS00975;old_locus_tag=CYJ01_00975 NZ_PJUR01000001.1 Protein Homology CDS 213604 216009 . - 0 ID=cds-WP_101457101.1;Parent=gene-CYJ01_RS00975;Dbxref=GenBank:WP_101457101.1;Name=WP_101457101.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=CYJ01_RS00975;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_101457101.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 215996 217066 . - . ID=gene-CYJ01_RS00980;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CYJ01_RS00980;old_locus_tag=CYJ01_00980 NZ_PJUR01000001.1 Protein Homology CDS 215996 217066 . - 0 ID=cds-WP_101457102.1;Parent=gene-CYJ01_RS00980;Dbxref=GenBank:WP_101457102.1;Name=WP_101457102.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168152.1;locus_tag=CYJ01_RS00980;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_101457102.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 217475 218221 . - . ID=gene-CYJ01_RS00985;Name=CYJ01_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00985;old_locus_tag=CYJ01_00985 NZ_PJUR01000001.1 Protein Homology CDS 217475 218221 . - 0 ID=cds-WP_096535819.1;Parent=gene-CYJ01_RS00985;Dbxref=GenBank:WP_096535819.1;Name=WP_096535819.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=CYJ01_RS00985;product=TrmH family RNA methyltransferase;protein_id=WP_096535819.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 218335 218508 . - . ID=gene-CYJ01_RS00990;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CYJ01_RS00990;old_locus_tag=CYJ01_00990 NZ_PJUR01000001.1 Protein Homology CDS 218335 218508 . - 0 ID=cds-WP_014614214.1;Parent=gene-CYJ01_RS00990;Dbxref=GenBank:WP_014614214.1;Name=WP_014614214.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CYJ01_RS00990;product=50S ribosomal protein L32;protein_id=WP_014614214.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 218565 219104 . - . ID=gene-CYJ01_RS00995;Name=CYJ01_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS00995;old_locus_tag=CYJ01_00995 NZ_PJUR01000001.1 Protein Homology CDS 218565 219104 . - 0 ID=cds-WP_014614215.1;Parent=gene-CYJ01_RS00995;Dbxref=GenBank:WP_014614215.1;Name=WP_014614215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=CYJ01_RS00995;product=YceD family protein;protein_id=WP_014614215.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 219231 220367 . + . ID=gene-CYJ01_RS01000;Name=CYJ01_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01000;old_locus_tag=CYJ01_01000 NZ_PJUR01000001.1 Protein Homology CDS 219231 220367 . + 0 ID=cds-WP_014614216.1;Parent=gene-CYJ01_RS01000;Dbxref=GenBank:WP_014614216.1;Name=WP_014614216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728964.1;locus_tag=CYJ01_RS01000;product=nucleotidyltransferase;protein_id=WP_014614216.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 220701 221192 . - . ID=gene-CYJ01_RS01005;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CYJ01_RS01005;old_locus_tag=CYJ01_01005 NZ_PJUR01000001.1 Protein Homology CDS 220701 221192 . - 0 ID=cds-WP_014614217.1;Parent=gene-CYJ01_RS01005;Dbxref=GenBank:WP_014614217.1;Name=WP_014614217.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=CYJ01_RS01005;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014614217.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 221185 221736 . - . ID=gene-CYJ01_RS01010;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CYJ01_RS01010;old_locus_tag=CYJ01_01010 NZ_PJUR01000001.1 Protein Homology CDS 221185 221736 . - 0 ID=cds-WP_014614218.1;Parent=gene-CYJ01_RS01010;Dbxref=GenBank:WP_014614218.1;Name=WP_014614218.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=CYJ01_RS01010;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_014614218.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 221799 222188 . + . ID=gene-CYJ01_RS01015;Name=CYJ01_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01015;old_locus_tag=CYJ01_01015 NZ_PJUR01000001.1 Protein Homology CDS 221799 222188 . + 0 ID=cds-WP_037543286.1;Parent=gene-CYJ01_RS01015;Dbxref=GenBank:WP_037543286.1;Name=WP_037543286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=CYJ01_RS01015;product=DUF7147 family protein;protein_id=WP_037543286.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 222191 222436 . - . ID=gene-CYJ01_RS01020;Name=CYJ01_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01020;old_locus_tag=CYJ01_01020 NZ_PJUR01000001.1 Protein Homology CDS 222191 222436 . - 0 ID=cds-WP_014614220.1;Parent=gene-CYJ01_RS01020;Dbxref=GenBank:WP_014614220.1;Name=WP_014614220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614220.1;locus_tag=CYJ01_RS01020;product=YlbG family protein;protein_id=WP_014614220.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 222530 223462 . + . ID=gene-CYJ01_RS01025;Name=CYJ01_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01025;old_locus_tag=CYJ01_01025 NZ_PJUR01000001.1 Protein Homology CDS 222530 223462 . + 0 ID=cds-WP_101457103.1;Parent=gene-CYJ01_RS01025;Dbxref=GenBank:WP_101457103.1;Name=WP_101457103.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=CYJ01_RS01025;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_101457103.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 223527 223967 . - . ID=gene-CYJ01_RS01030;Name=CYJ01_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01030;old_locus_tag=CYJ01_01030 NZ_PJUR01000001.1 Protein Homology CDS 223527 223967 . - 0 ID=cds-WP_014614222.1;Parent=gene-CYJ01_RS01030;Dbxref=GenBank:WP_014614222.1;Name=WP_014614222.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614222.1;locus_tag=CYJ01_RS01030;product=YlbF/YmcA family competence regulator;protein_id=WP_014614222.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 223969 225039 . - . ID=gene-CYJ01_RS01035;Name=CYJ01_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01035;old_locus_tag=CYJ01_01035 NZ_PJUR01000001.1 Protein Homology CDS 223969 225039 . - 0 ID=cds-WP_014614223.1;Parent=gene-CYJ01_RS01035;Dbxref=GenBank:WP_014614223.1;Name=WP_014614223.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=CYJ01_RS01035;product=CAP domain-containing protein;protein_id=WP_014614223.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 225683 226144 . - . ID=gene-CYJ01_RS01040;Name=CYJ01_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01040;old_locus_tag=CYJ01_01040 NZ_PJUR01000001.1 Protein Homology CDS 225683 226144 . - 0 ID=cds-WP_014614224.1;Parent=gene-CYJ01_RS01040;Dbxref=GenBank:WP_014614224.1;Name=WP_014614224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=CYJ01_RS01040;product=DUF420 domain-containing protein;protein_id=WP_014614224.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 226172 227083 . - . ID=gene-CYJ01_RS01045;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CYJ01_RS01045;old_locus_tag=CYJ01_01045 NZ_PJUR01000001.1 Protein Homology CDS 226172 227083 . - 0 ID=cds-WP_101457104.1;Parent=gene-CYJ01_RS01045;Dbxref=GenBank:WP_101457104.1;Name=WP_101457104.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276112.1;locus_tag=CYJ01_RS01045;product=heme o synthase;protein_id=WP_101457104.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 227295 228209 . + . ID=gene-CYJ01_RS01050;Name=CYJ01_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01050;old_locus_tag=CYJ01_01050 NZ_PJUR01000001.1 Protein Homology CDS 227295 228209 . + 0 ID=cds-WP_101431264.1;Parent=gene-CYJ01_RS01050;Dbxref=GenBank:WP_101431264.1;Name=WP_101431264.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728962.1;locus_tag=CYJ01_RS01050;product=COX15/CtaA family protein;protein_id=WP_101431264.1;transl_table=11 NZ_PJUR01000001.1 RefSeq gene 228347 231796 . - . ID=gene-CYJ01_RS01055;Name=CYJ01_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01055;old_locus_tag=CYJ01_01055 NZ_PJUR01000001.1 Protein Homology CDS 228347 231796 . - 0 ID=cds-WP_101431263.1;Parent=gene-CYJ01_RS01055;Dbxref=GenBank:WP_101431263.1;Name=WP_101431263.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614227.1;locus_tag=CYJ01_RS01055;product=pyruvate carboxylase;protein_id=WP_101431263.1;transl_table=11 ##sequence-region NZ_PJUR01000010.1 1 104614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000010.1 RefSeq region 1 104614 . + . ID=NZ_PJUR01000010.1:1..104614;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000010.1 RefSeq gene 24 722 . - . ID=gene-CYJ01_RS05220;Name=CYJ01_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05220;old_locus_tag=CYJ01_05220 NZ_PJUR01000010.1 GeneMarkS-2+ CDS 24 722 . - 0 ID=cds-WP_241900530.1;Parent=gene-CYJ01_RS05220;Dbxref=GenBank:WP_241900530.1;Name=WP_241900530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS05220;product=hypothetical protein;protein_id=WP_241900530.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 1028 1204 . - . ID=gene-CYJ01_RS05225;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CYJ01_RS05225;old_locus_tag=CYJ01_05225 NZ_PJUR01000010.1 Protein Homology CDS 1028 1204 . - 0 ID=cds-WP_002471046.1;Parent=gene-CYJ01_RS05225;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CYJ01_RS05225;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 1413 2762 . - . ID=gene-CYJ01_RS05230;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05230;old_locus_tag=CYJ01_05230 NZ_PJUR01000010.1 Protein Homology CDS 1413 2762 . - 0 ID=cds-WP_015729250.1;Parent=gene-CYJ01_RS05230;Dbxref=GenBank:WP_015729250.1;Name=WP_015729250.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729250.1;locus_tag=CYJ01_RS05230;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_015729250.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 2767 3519 . - . ID=gene-CYJ01_RS05235;Name=CYJ01_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05235;old_locus_tag=CYJ01_05235 NZ_PJUR01000010.1 Protein Homology CDS 2767 3519 . - 0 ID=cds-WP_014613779.1;Parent=gene-CYJ01_RS05235;Dbxref=GenBank:WP_014613779.1;Name=WP_014613779.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=CYJ01_RS05235;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_014613779.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 3521 4453 . - . ID=gene-CYJ01_RS05240;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05240;old_locus_tag=CYJ01_05240 NZ_PJUR01000010.1 Protein Homology CDS 3521 4453 . - 0 ID=cds-WP_101457343.1;Parent=gene-CYJ01_RS05240;Dbxref=GenBank:WP_101457343.1;Name=WP_101457343.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613778.1;locus_tag=CYJ01_RS05240;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_101457343.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 4457 5590 . - . ID=gene-CYJ01_RS05245;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS05245;old_locus_tag=CYJ01_05245 NZ_PJUR01000010.1 Protein Homology CDS 4457 5590 . - 0 ID=cds-WP_014613777.1;Parent=gene-CYJ01_RS05245;Dbxref=GenBank:WP_014613777.1;Name=WP_014613777.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CYJ01_RS05245;product=molecular chaperone DnaJ;protein_id=WP_014613777.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 5700 7532 . - . ID=gene-CYJ01_RS05250;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CYJ01_RS05250;old_locus_tag=CYJ01_05250 NZ_PJUR01000010.1 Protein Homology CDS 5700 7532 . - 0 ID=cds-WP_037542852.1;Parent=gene-CYJ01_RS05250;Dbxref=GenBank:WP_037542852.1;Name=WP_037542852.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729252.1;locus_tag=CYJ01_RS05250;product=molecular chaperone DnaK;protein_id=WP_037542852.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 7596 8237 . - . ID=gene-CYJ01_RS05255;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05255;old_locus_tag=CYJ01_05255 NZ_PJUR01000010.1 Protein Homology CDS 7596 8237 . - 0 ID=cds-WP_014613775.1;Parent=gene-CYJ01_RS05255;Dbxref=GenBank:WP_014613775.1;Name=WP_014613775.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613775.1;locus_tag=CYJ01_RS05255;product=nucleotide exchange factor GrpE;protein_id=WP_014613775.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 8252 9241 . - . ID=gene-CYJ01_RS05260;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05260;old_locus_tag=CYJ01_05260 NZ_PJUR01000010.1 Protein Homology CDS 8252 9241 . - 0 ID=cds-WP_037542851.1;Parent=gene-CYJ01_RS05260;Dbxref=GenBank:WP_037542851.1;Name=WP_037542851.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=CYJ01_RS05260;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_037542851.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 9344 10465 . - . ID=gene-CYJ01_RS05265;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CYJ01_RS05265;old_locus_tag=CYJ01_05265 NZ_PJUR01000010.1 Protein Homology CDS 9344 10465 . - 0 ID=cds-WP_014613773.1;Parent=gene-CYJ01_RS05265;Dbxref=GenBank:WP_014613773.1;Name=WP_014613773.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=CYJ01_RS05265;product=radical SAM family heme chaperone HemW;protein_id=WP_014613773.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 10533 12356 . - . ID=gene-CYJ01_RS05270;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05270;old_locus_tag=CYJ01_05270 NZ_PJUR01000010.1 Protein Homology CDS 10533 12356 . - 0 ID=cds-WP_014613772.1;Parent=gene-CYJ01_RS05270;Dbxref=GenBank:WP_014613772.1;Name=WP_014613772.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=CYJ01_RS05270;product=translation elongation factor 4;protein_id=WP_014613772.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 12679 12927 . + . ID=gene-CYJ01_RS05275;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CYJ01_RS05275;old_locus_tag=CYJ01_05275 NZ_PJUR01000010.1 Protein Homology CDS 12679 12927 . + 0 ID=cds-WP_014613771.1;Parent=gene-CYJ01_RS05275;Dbxref=GenBank:WP_014613771.1;Name=WP_014613771.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=CYJ01_RS05275;product=30S ribosomal protein S20;protein_id=WP_014613771.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 13101 14075 . - . ID=gene-CYJ01_RS05280;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05280;old_locus_tag=CYJ01_05280 NZ_PJUR01000010.1 Protein Homology CDS 13101 14075 . - 0 ID=cds-WP_014613770.1;Parent=gene-CYJ01_RS05280;Dbxref=GenBank:WP_014613770.1;Name=WP_014613770.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729255.1;locus_tag=CYJ01_RS05280;product=DNA polymerase III subunit delta;protein_id=WP_014613770.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 14143 16371 . - . ID=gene-CYJ01_RS05285;Name=CYJ01_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05285;old_locus_tag=CYJ01_05285 NZ_PJUR01000010.1 Protein Homology CDS 14143 16371 . - 0 ID=cds-WP_101457344.1;Parent=gene-CYJ01_RS05285;Dbxref=GenBank:WP_101457344.1;Name=WP_101457344.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219756.1;locus_tag=CYJ01_RS05285;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_101457344.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 16371 16832 . - . ID=gene-CYJ01_RS05290;Name=CYJ01_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05290;old_locus_tag=CYJ01_05290 NZ_PJUR01000010.1 Protein Homology CDS 16371 16832 . - 0 ID=cds-WP_015729257.1;Parent=gene-CYJ01_RS05290;Dbxref=GenBank:WP_015729257.1;Name=WP_015729257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729257.1;locus_tag=CYJ01_RS05290;product=ComE operon protein 2;protein_id=WP_015729257.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 16918 17586 . - . ID=gene-CYJ01_RS05295;Name=CYJ01_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05295;old_locus_tag=CYJ01_05295 NZ_PJUR01000010.1 Protein Homology CDS 16918 17586 . - 0 ID=cds-WP_014613767.1;Parent=gene-CYJ01_RS05295;Dbxref=GenBank:WP_014613767.1;Name=WP_014613767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613767.1;locus_tag=CYJ01_RS05295;product=helix-hairpin-helix domain-containing protein;protein_id=WP_014613767.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 17640 18362 . - . ID=gene-CYJ01_RS05300;Name=CYJ01_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05300;old_locus_tag=CYJ01_05300 NZ_PJUR01000010.1 Protein Homology CDS 17640 18362 . - 0 ID=cds-WP_015729258.1;Parent=gene-CYJ01_RS05300;Dbxref=GenBank:WP_015729258.1;Name=WP_015729258.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=CYJ01_RS05300;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_015729258.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 18362 18718 . - . ID=gene-CYJ01_RS05305;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05305;old_locus_tag=CYJ01_05305 NZ_PJUR01000010.1 Protein Homology CDS 18362 18718 . - 0 ID=cds-WP_014613765.1;Parent=gene-CYJ01_RS05305;Dbxref=GenBank:WP_014613765.1;Name=WP_014613765.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=CYJ01_RS05305;product=ribosome silencing factor;protein_id=WP_014613765.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 18719 19303 . - . ID=gene-CYJ01_RS05310;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=CYJ01_RS05310;old_locus_tag=CYJ01_05310 NZ_PJUR01000010.1 Protein Homology CDS 18719 19303 . - 0 ID=cds-WP_014613764.1;Parent=gene-CYJ01_RS05310;Dbxref=GenBank:WP_014613764.1;Name=WP_014613764.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613764.1;locus_tag=CYJ01_RS05310;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_014613764.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 19281 19862 . - . ID=gene-CYJ01_RS05315;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CYJ01_RS05315;old_locus_tag=CYJ01_05315 NZ_PJUR01000010.1 Protein Homology CDS 19281 19862 . - 0 ID=cds-WP_014613763.1;Parent=gene-CYJ01_RS05315;Dbxref=GenBank:WP_014613763.1;Name=WP_014613763.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=CYJ01_RS05315;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_014613763.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 19865 20158 . - . ID=gene-CYJ01_RS05320;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CYJ01_RS05320;old_locus_tag=CYJ01_05320 NZ_PJUR01000010.1 Protein Homology CDS 19865 20158 . - 0 ID=cds-WP_014613762.1;Parent=gene-CYJ01_RS05320;Dbxref=GenBank:WP_014613762.1;Name=WP_014613762.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169726.1;locus_tag=CYJ01_RS05320;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_014613762.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 20169 20981 . - . ID=gene-CYJ01_RS05325;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05325;old_locus_tag=CYJ01_05325 NZ_PJUR01000010.1 Protein Homology CDS 20169 20981 . - 0 ID=cds-WP_015729259.1;Parent=gene-CYJ01_RS05325;Dbxref=GenBank:WP_015729259.1;Name=WP_015729259.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219754.1;locus_tag=CYJ01_RS05325;product=shikimate dehydrogenase;protein_id=WP_015729259.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 20997 22097 . - . ID=gene-CYJ01_RS05330;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=CYJ01_RS05330;old_locus_tag=CYJ01_05330 NZ_PJUR01000010.1 Protein Homology CDS 20997 22097 . - 0 ID=cds-WP_014613760.1;Parent=gene-CYJ01_RS05330;Dbxref=GenBank:WP_014613760.1;Name=WP_014613760.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=CYJ01_RS05330;product=ribosome biogenesis GTPase YqeH;protein_id=WP_014613760.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 22098 22625 . - . ID=gene-CYJ01_RS05335;Name=CYJ01_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05335;old_locus_tag=CYJ01_05335 NZ_PJUR01000010.1 Protein Homology CDS 22098 22625 . - 0 ID=cds-WP_014613759.1;Parent=gene-CYJ01_RS05335;Dbxref=GenBank:WP_014613759.1;Name=WP_014613759.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=CYJ01_RS05335;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_014613759.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 22698 23384 . - . ID=gene-CYJ01_RS05340;Name=CYJ01_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05340;old_locus_tag=CYJ01_05340 NZ_PJUR01000010.1 Protein Homology CDS 22698 23384 . - 0 ID=cds-WP_101431348.1;Parent=gene-CYJ01_RS05340;Dbxref=GenBank:WP_101431348.1;Name=WP_101431348.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302980.1;locus_tag=CYJ01_RS05340;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_101431348.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 23634 24872 . - . ID=gene-CYJ01_RS05345;Name=CYJ01_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05345;old_locus_tag=CYJ01_05345 NZ_PJUR01000010.1 Protein Homology CDS 23634 24872 . - 0 ID=cds-WP_014613757.1;Parent=gene-CYJ01_RS05345;Dbxref=GenBank:WP_014613757.1;Name=WP_014613757.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169721.1;locus_tag=CYJ01_RS05345;product=NRAMP family divalent metal transporter;protein_id=WP_014613757.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 24876 25634 . - . ID=gene-CYJ01_RS05350;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05350;old_locus_tag=CYJ01_05350 NZ_PJUR01000010.1 Protein Homology CDS 24876 25634 . - 0 ID=cds-WP_014613756.1;Parent=gene-CYJ01_RS05350;Dbxref=GenBank:WP_014613756.1;Name=WP_014613756.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165174.1;locus_tag=CYJ01_RS05350;product=5-oxoprolinase subunit PxpA;protein_id=WP_014613756.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 25624 26994 . - . ID=gene-CYJ01_RS05355;Name=CYJ01_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05355;old_locus_tag=CYJ01_05355 NZ_PJUR01000010.1 Protein Homology CDS 25624 26994 . - 0 ID=cds-WP_014613755.1;Parent=gene-CYJ01_RS05355;Dbxref=GenBank:WP_014613755.1;Name=WP_014613755.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=CYJ01_RS05355;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_014613755.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 27008 27454 . - . ID=gene-CYJ01_RS05360;Name=CYJ01_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05360;old_locus_tag=CYJ01_05360 NZ_PJUR01000010.1 Protein Homology CDS 27008 27454 . - 0 ID=cds-WP_037542842.1;Parent=gene-CYJ01_RS05360;Dbxref=GenBank:WP_037542842.1;Name=WP_037542842.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613754.1;locus_tag=CYJ01_RS05360;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542842.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 27445 28470 . - . ID=gene-CYJ01_RS05365;Name=CYJ01_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05365;old_locus_tag=CYJ01_05365 NZ_PJUR01000010.1 Protein Homology CDS 27445 28470 . - 0 ID=cds-WP_037542841.1;Parent=gene-CYJ01_RS05365;Dbxref=GenBank:WP_037542841.1;Name=WP_037542841.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=CYJ01_RS05365;product=5-oxoprolinase subunit C family protein;protein_id=WP_037542841.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 28460 29194 . - . ID=gene-CYJ01_RS05370;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05370;old_locus_tag=CYJ01_05370 NZ_PJUR01000010.1 Protein Homology CDS 28460 29194 . - 0 ID=cds-WP_100006540.1;Parent=gene-CYJ01_RS05370;Dbxref=GenBank:WP_100006540.1;Name=WP_100006540.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=CYJ01_RS05370;product=5-oxoprolinase subunit PxpB;protein_id=WP_100006540.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 29450 29926 . - . ID=gene-CYJ01_RS05375;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05375;old_locus_tag=CYJ01_05375 NZ_PJUR01000010.1 Protein Homology CDS 29450 29926 . - 0 ID=cds-WP_014613751.1;Parent=gene-CYJ01_RS05375;Dbxref=GenBank:WP_014613751.1;Name=WP_014613751.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169715.1;locus_tag=CYJ01_RS05375;product=transcription elongation factor GreA;protein_id=WP_014613751.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 29953 30576 . - . ID=gene-CYJ01_RS05380;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CYJ01_RS05380;old_locus_tag=CYJ01_05380 NZ_PJUR01000010.1 Protein Homology CDS 29953 30576 . - 0 ID=cds-WP_014613750.1;Parent=gene-CYJ01_RS05380;Dbxref=GenBank:WP_014613750.1;Name=WP_014613750.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613750.1;locus_tag=CYJ01_RS05380;product=uridine kinase;protein_id=WP_014613750.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 30580 31845 . - . ID=gene-CYJ01_RS05385;Name=CYJ01_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05385;old_locus_tag=CYJ01_05385 NZ_PJUR01000010.1 Protein Homology CDS 30580 31845 . - 0 ID=cds-WP_014613749.1;Parent=gene-CYJ01_RS05385;Dbxref=GenBank:WP_014613749.1;Name=WP_014613749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169713.1;locus_tag=CYJ01_RS05385;product=peptidase U32 family protein;protein_id=WP_014613749.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 31864 32793 . - . ID=gene-CYJ01_RS05390;Name=CYJ01_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05390;old_locus_tag=CYJ01_05390 NZ_PJUR01000010.1 Protein Homology CDS 31864 32793 . - 0 ID=cds-WP_014613748.1;Parent=gene-CYJ01_RS05390;Dbxref=GenBank:WP_014613748.1;Name=WP_014613748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CYJ01_RS05390;product=peptidase U32 family protein;protein_id=WP_014613748.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 32786 33430 . - . ID=gene-CYJ01_RS05395;Name=CYJ01_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05395;old_locus_tag=CYJ01_05395 NZ_PJUR01000010.1 Protein Homology CDS 32786 33430 . - 0 ID=cds-WP_014613747.1;Parent=gene-CYJ01_RS05395;Dbxref=GenBank:WP_014613747.1;Name=WP_014613747.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=CYJ01_RS05395;product=O-methyltransferase;protein_id=WP_014613747.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 33827 34147 . - . ID=gene-CYJ01_RS05400;Name=CYJ01_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05400;old_locus_tag=CYJ01_05400 NZ_PJUR01000010.1 Protein Homology CDS 33827 34147 . - 0 ID=cds-WP_101431347.1;Parent=gene-CYJ01_RS05400;Dbxref=GenBank:WP_101431347.1;Name=WP_101431347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=CYJ01_RS05400;product=DUF1292 domain-containing protein;protein_id=WP_101431347.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 34161 34589 . - . ID=gene-CYJ01_RS05405;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CYJ01_RS05405;old_locus_tag=CYJ01_05405 NZ_PJUR01000010.1 Protein Homology CDS 34161 34589 . - 0 ID=cds-WP_014613744.1;Parent=gene-CYJ01_RS05405;Dbxref=GenBank:WP_014613744.1;Name=WP_014613744.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=CYJ01_RS05405;product=Holliday junction resolvase RuvX;protein_id=WP_014613744.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 34582 34854 . - . ID=gene-CYJ01_RS05410;Name=CYJ01_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05410;old_locus_tag=CYJ01_05410 NZ_PJUR01000010.1 Protein Homology CDS 34582 34854 . - 0 ID=cds-WP_014613743.1;Parent=gene-CYJ01_RS05410;Dbxref=GenBank:WP_014613743.1;Name=WP_014613743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=CYJ01_RS05410;product=IreB family regulatory phosphoprotein;protein_id=WP_014613743.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 34917 37547 . - . ID=gene-CYJ01_RS05415;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05415;old_locus_tag=CYJ01_05415 NZ_PJUR01000010.1 Protein Homology CDS 34917 37547 . - 0 ID=cds-WP_065354191.1;Parent=gene-CYJ01_RS05415;Dbxref=GenBank:WP_065354191.1;Name=WP_065354191.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512470.1;locus_tag=CYJ01_RS05415;product=alanine--tRNA ligase;protein_id=WP_065354191.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 37793 40192 . - . ID=gene-CYJ01_RS05420;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=CYJ01_RS05420;old_locus_tag=CYJ01_05420 NZ_PJUR01000010.1 Protein Homology CDS 37793 40192 . - 0 ID=cds-WP_014613741.1;Parent=gene-CYJ01_RS05420;Dbxref=GenBank:WP_014613741.1;Name=WP_014613741.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169706.1;locus_tag=CYJ01_RS05420;product=SF1B family DNA helicase RecD2;protein_id=WP_014613741.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 40195 40869 . - . ID=gene-CYJ01_RS05425;Name=CYJ01_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05425;old_locus_tag=CYJ01_05425 NZ_PJUR01000010.1 Protein Homology CDS 40195 40869 . - 0 ID=cds-WP_065354190.1;Parent=gene-CYJ01_RS05425;Dbxref=GenBank:WP_065354190.1;Name=WP_065354190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=CYJ01_RS05425;product=tetratricopeptide repeat protein;protein_id=WP_065354190.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 40885 41997 . - . ID=gene-CYJ01_RS05430;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05430;old_locus_tag=CYJ01_05430 NZ_PJUR01000010.1 Protein Homology CDS 40885 41997 . - 0 ID=cds-WP_014613739.1;Parent=gene-CYJ01_RS05430;Dbxref=GenBank:WP_014613739.1;Name=WP_014613739.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469417.1;locus_tag=CYJ01_RS05430;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_014613739.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 41997 43142 . - . ID=gene-CYJ01_RS05435;Name=CYJ01_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05435;old_locus_tag=CYJ01_05435 NZ_PJUR01000010.1 Protein Homology CDS 41997 43142 . - 0 ID=cds-WP_014613738.1;Parent=gene-CYJ01_RS05435;Dbxref=GenBank:WP_014613738.1;Name=WP_014613738.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613738.1;locus_tag=CYJ01_RS05435;product=cysteine desulfurase family protein;protein_id=WP_014613738.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 43351 44367 . + . ID=gene-CYJ01_RS05440;Name=CYJ01_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05440;old_locus_tag=CYJ01_05440 NZ_PJUR01000010.1 Protein Homology CDS 43351 44367 . + 0 ID=cds-WP_014613737.1;Parent=gene-CYJ01_RS05440;Dbxref=GenBank:WP_014613737.1;Name=WP_014613737.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219747.1;locus_tag=CYJ01_RS05440;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613737.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 44831 45016 . - . ID=gene-CYJ01_RS05445;Name=CYJ01_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05445;old_locus_tag=CYJ01_05445 NZ_PJUR01000010.1 Protein Homology CDS 44831 45016 . - 0 ID=cds-WP_014613736.1;Parent=gene-CYJ01_RS05445;Dbxref=GenBank:WP_014613736.1;Name=WP_014613736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613736.1;locus_tag=CYJ01_RS05445;product=CsbD family protein;protein_id=WP_014613736.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 45084 45914 . - . ID=gene-CYJ01_RS05450;Name=CYJ01_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05450;old_locus_tag=CYJ01_05450 NZ_PJUR01000010.1 Protein Homology CDS 45084 45914 . - 0 ID=cds-WP_037542838.1;Parent=gene-CYJ01_RS05450;Dbxref=GenBank:WP_037542838.1;Name=WP_037542838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=CYJ01_RS05450;product=aldo/keto reductase;protein_id=WP_037542838.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 45955 46374 . - . ID=gene-CYJ01_RS05455;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=CYJ01_RS05455;old_locus_tag=CYJ01_05455 NZ_PJUR01000010.1 Protein Homology CDS 45955 46374 . - 0 ID=cds-WP_014613734.1;Parent=gene-CYJ01_RS05455;Dbxref=GenBank:WP_014613734.1;Name=WP_014613734.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CYJ01_RS05455;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_014613734.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 46484 47755 . + . ID=gene-CYJ01_RS05460;Name=CYJ01_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05460;old_locus_tag=CYJ01_05460 NZ_PJUR01000010.1 Protein Homology CDS 46484 47755 . + 0 ID=cds-WP_101457345.1;Parent=gene-CYJ01_RS05460;Dbxref=GenBank:WP_101457345.1;Name=WP_101457345.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165155.1;locus_tag=CYJ01_RS05460;product=replication-associated recombination protein A;protein_id=WP_101457345.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 47823 48590 . - . ID=gene-CYJ01_RS05465;Name=CYJ01_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05465;old_locus_tag=CYJ01_05465 NZ_PJUR01000010.1 Protein Homology CDS 47823 48590 . - 0 ID=cds-WP_014613732.1;Parent=gene-CYJ01_RS05465;Dbxref=GenBank:WP_014613732.1;Name=WP_014613732.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=CYJ01_RS05465;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_014613732.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 48673 48865 . - . ID=gene-CYJ01_RS05470;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CYJ01_RS05470;old_locus_tag=CYJ01_05470 NZ_PJUR01000010.1 cmsearch ncRNA 48673 48865 . - . ID=rna-CYJ01_RS05470;Parent=gene-CYJ01_RS05470;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS05470;product=6S RNA NZ_PJUR01000010.1 cmsearch exon 48673 48865 . - . ID=exon-CYJ01_RS05470-1;Parent=rna-CYJ01_RS05470;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS05470;product=6S RNA NZ_PJUR01000010.1 RefSeq gene 48936 50702 . - . ID=gene-CYJ01_RS05475;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05475;old_locus_tag=CYJ01_05475 NZ_PJUR01000010.1 Protein Homology CDS 48936 50702 . - 0 ID=cds-WP_014613731.1;Parent=gene-CYJ01_RS05475;Dbxref=GenBank:WP_014613731.1;Name=WP_014613731.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=CYJ01_RS05475;product=aspartate--tRNA ligase;protein_id=WP_014613731.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 50702 51973 . - . ID=gene-CYJ01_RS05480;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05480;old_locus_tag=CYJ01_05480 NZ_PJUR01000010.1 Protein Homology CDS 50702 51973 . - 0 ID=cds-WP_014613730.1;Parent=gene-CYJ01_RS05480;Dbxref=GenBank:WP_014613730.1;Name=WP_014613730.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=CYJ01_RS05480;product=histidine--tRNA ligase;protein_id=WP_014613730.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 52335 53210 . - . ID=gene-CYJ01_RS05485;Name=CYJ01_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05485;old_locus_tag=CYJ01_05485 NZ_PJUR01000010.1 Protein Homology CDS 52335 53210 . - 0 ID=cds-WP_020219744.1;Parent=gene-CYJ01_RS05485;Dbxref=GenBank:WP_020219744.1;Name=WP_020219744.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=CYJ01_RS05485;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_020219744.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 53207 53659 . - . ID=gene-CYJ01_RS05490;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CYJ01_RS05490;old_locus_tag=CYJ01_05490 NZ_PJUR01000010.1 Protein Homology CDS 53207 53659 . - 0 ID=cds-WP_014613728.1;Parent=gene-CYJ01_RS05490;Dbxref=GenBank:WP_014613728.1;Name=WP_014613728.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302954.1;locus_tag=CYJ01_RS05490;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014613728.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 53672 55861 . - . ID=gene-CYJ01_RS05495;Name=CYJ01_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05495;old_locus_tag=CYJ01_05495 NZ_PJUR01000010.1 Protein Homology CDS 53672 55861 . - 0 ID=cds-WP_014613727.1;Parent=gene-CYJ01_RS05495;Dbxref=GenBank:WP_014613727.1;Name=WP_014613727.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=CYJ01_RS05495;product=RelA/SpoT family protein;protein_id=WP_014613727.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 56218 56736 . - . ID=gene-CYJ01_RS05500;Name=CYJ01_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05500;old_locus_tag=CYJ01_05500 NZ_PJUR01000010.1 Protein Homology CDS 56218 56736 . - 0 ID=cds-WP_014613726.1;Parent=gene-CYJ01_RS05500;Dbxref=GenBank:WP_014613726.1;Name=WP_014613726.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CYJ01_RS05500;product=adenine phosphoribosyltransferase;protein_id=WP_014613726.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 56748 59033 . - . ID=gene-CYJ01_RS05505;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS05505;old_locus_tag=CYJ01_05505 NZ_PJUR01000010.1 Protein Homology CDS 56748 59033 . - 0 ID=cds-WP_037544195.1;Parent=gene-CYJ01_RS05505;Dbxref=GenBank:WP_037544195.1;Name=WP_037544195.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=CYJ01_RS05505;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_037544195.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 59150 61429 . - . ID=gene-CYJ01_RS05510;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=CYJ01_RS05510;old_locus_tag=CYJ01_05510 NZ_PJUR01000010.1 Protein Homology CDS 59150 61429 . - 0 ID=cds-WP_014613724.1;Parent=gene-CYJ01_RS05510;Dbxref=GenBank:WP_014613724.1;Name=WP_014613724.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491144.1;locus_tag=CYJ01_RS05510;product=protein translocase subunit SecDF;protein_id=WP_014613724.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 61571 61834 . - . ID=gene-CYJ01_RS05515;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05515;old_locus_tag=CYJ01_05515 NZ_PJUR01000010.1 Protein Homology CDS 61571 61834 . - 0 ID=cds-WP_014613723.1;Parent=gene-CYJ01_RS05515;Dbxref=GenBank:WP_014613723.1;Name=WP_014613723.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=CYJ01_RS05515;product=preprotein translocase subunit YajC;protein_id=WP_014613723.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 61851 62990 . - . ID=gene-CYJ01_RS05520;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CYJ01_RS05520;old_locus_tag=CYJ01_05520 NZ_PJUR01000010.1 Protein Homology CDS 61851 62990 . - 0 ID=cds-WP_014613722.1;Parent=gene-CYJ01_RS05520;Dbxref=GenBank:WP_014613722.1;Name=WP_014613722.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CYJ01_RS05520;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_014613722.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 63008 64033 . - . ID=gene-CYJ01_RS05525;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05525;old_locus_tag=CYJ01_05525 NZ_PJUR01000010.1 Protein Homology CDS 63008 64033 . - 0 ID=cds-WP_037542836.1;Parent=gene-CYJ01_RS05525;Dbxref=GenBank:WP_037542836.1;Name=WP_037542836.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CYJ01_RS05525;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037542836.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 64051 65049 . - . ID=gene-CYJ01_RS05530;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05530;old_locus_tag=CYJ01_05530 NZ_PJUR01000010.1 Protein Homology CDS 64051 65049 . - 0 ID=cds-WP_020219741.1;Parent=gene-CYJ01_RS05530;Dbxref=GenBank:WP_020219741.1;Name=WP_020219741.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=CYJ01_RS05530;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_020219741.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 65063 65662 . - . ID=gene-CYJ01_RS05535;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05535;old_locus_tag=CYJ01_05535 NZ_PJUR01000010.1 Protein Homology CDS 65063 65662 . - 0 ID=cds-WP_065354185.1;Parent=gene-CYJ01_RS05535;Dbxref=GenBank:WP_065354185.1;Name=WP_065354185.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=CYJ01_RS05535;product=Holliday junction branch migration protein RuvA;protein_id=WP_065354185.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 65676 66119 . - . ID=gene-CYJ01_RS05540;Name=CYJ01_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05540;old_locus_tag=CYJ01_05540 NZ_PJUR01000010.1 Protein Homology CDS 65676 66119 . - 0 ID=cds-WP_014613718.1;Parent=gene-CYJ01_RS05540;Dbxref=GenBank:WP_014613718.1;Name=WP_014613718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=CYJ01_RS05540;product=ACT domain-containing protein;protein_id=WP_014613718.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 66147 67439 . - . ID=gene-CYJ01_RS05545;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05545;old_locus_tag=CYJ01_05545 NZ_PJUR01000010.1 Protein Homology CDS 66147 67439 . - 0 ID=cds-WP_037542834.1;Parent=gene-CYJ01_RS05545;Dbxref=GenBank:WP_037542834.1;Name=WP_037542834.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CYJ01_RS05545;product=GTPase ObgE;protein_id=WP_037542834.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 67568 67852 . - . ID=gene-CYJ01_RS05550;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05550;old_locus_tag=CYJ01_05550 NZ_PJUR01000010.1 Protein Homology CDS 67568 67852 . - 0 ID=cds-WP_014613716.1;Parent=gene-CYJ01_RS05550;Dbxref=GenBank:WP_014613716.1;Name=WP_014613716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CYJ01_RS05550;product=50S ribosomal protein L27;protein_id=WP_014613716.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 67863 68183 . - . ID=gene-CYJ01_RS05555;Name=CYJ01_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05555;old_locus_tag=CYJ01_05555 NZ_PJUR01000010.1 Protein Homology CDS 67863 68183 . - 0 ID=cds-WP_014613715.1;Parent=gene-CYJ01_RS05555;Dbxref=GenBank:WP_014613715.1;Name=WP_014613715.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CYJ01_RS05555;product=ribosomal-processing cysteine protease Prp;protein_id=WP_014613715.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 68186 68494 . - . ID=gene-CYJ01_RS05560;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CYJ01_RS05560;old_locus_tag=CYJ01_05560 NZ_PJUR01000010.1 Protein Homology CDS 68186 68494 . - 0 ID=cds-WP_014613714.1;Parent=gene-CYJ01_RS05560;Dbxref=GenBank:WP_014613714.1;Name=WP_014613714.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CYJ01_RS05560;product=50S ribosomal protein L21;protein_id=WP_014613714.1;transl_table=11 NZ_PJUR01000010.1 cmsearch sequence_feature 68506 68579 . - . ID=id-NZ_PJUR01000010.1:68506..68579;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000010.1 RefSeq gene 68615 69130 . - . ID=gene-CYJ01_RS05565;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CYJ01_RS05565;old_locus_tag=CYJ01_05565 NZ_PJUR01000010.1 Protein Homology CDS 68615 69130 . - 0 ID=cds-WP_015729271.1;Parent=gene-CYJ01_RS05565;Dbxref=GenBank:WP_015729271.1;Name=WP_015729271.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729271.1;locus_tag=CYJ01_RS05565;product=rod shape-determining protein MreD;protein_id=WP_015729271.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 69130 69966 . - . ID=gene-CYJ01_RS05570;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05570;old_locus_tag=CYJ01_05570 NZ_PJUR01000010.1 Protein Homology CDS 69130 69966 . - 0 ID=cds-WP_015729272.1;Parent=gene-CYJ01_RS05570;Dbxref=GenBank:WP_015729272.1;Name=WP_015729272.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=CYJ01_RS05570;product=rod shape-determining protein MreC;protein_id=WP_015729272.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 70177 70317 . - . ID=gene-CYJ01_RS12110;Name=CYJ01_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12110 NZ_PJUR01000010.1 Protein Homology CDS 70177 70317 . - 0 ID=cds-WP_015729273.1;Parent=gene-CYJ01_RS12110;Dbxref=GenBank:WP_015729273.1;Name=WP_015729273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729273.1;locus_tag=CYJ01_RS12110;product=hypothetical protein;protein_id=WP_015729273.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 70403 70879 . - . ID=gene-CYJ01_RS05575;Name=CYJ01_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05575;old_locus_tag=CYJ01_05575 NZ_PJUR01000010.1 Protein Homology CDS 70403 70879 . - 0 ID=cds-WP_020219739.1;Parent=gene-CYJ01_RS05575;Dbxref=GenBank:WP_020219739.1;Name=WP_020219739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=CYJ01_RS05575;product=DUF4930 family protein;protein_id=WP_020219739.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 71049 71204 . + . ID=gene-CYJ01_RS12115;Name=CYJ01_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12115 NZ_PJUR01000010.1 Protein Homology CDS 71049 71204 . + 0 ID=cds-WP_015729275.1;Parent=gene-CYJ01_RS12115;Dbxref=GenBank:WP_015729275.1;Name=WP_015729275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729275.1;locus_tag=CYJ01_RS12115;product=hypothetical protein;protein_id=WP_015729275.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 71195 71452 . - . ID=gene-CYJ01_RS05580;Name=CYJ01_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05580;old_locus_tag=CYJ01_05580 NZ_PJUR01000010.1 GeneMarkS-2+ CDS 71195 71452 . - 0 ID=cds-WP_063278920.1;Parent=gene-CYJ01_RS05580;Dbxref=GenBank:WP_063278920.1;Name=WP_063278920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS05580;product=hypothetical protein;protein_id=WP_063278920.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 71442 72125 . - . ID=gene-CYJ01_RS05585;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05585;old_locus_tag=CYJ01_05585 NZ_PJUR01000010.1 Protein Homology CDS 71442 72125 . - 0 ID=cds-WP_065354183.1;Parent=gene-CYJ01_RS05585;Dbxref=GenBank:WP_065354183.1;Name=WP_065354183.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=CYJ01_RS05585;product=RadC family protein;protein_id=WP_065354183.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 72122 72847 . - . ID=gene-CYJ01_RS05590;Name=CYJ01_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05590;old_locus_tag=CYJ01_05590 NZ_PJUR01000010.1 Protein Homology CDS 72122 72847 . - 0 ID=cds-WP_274539889.1;Parent=gene-CYJ01_RS05590;Dbxref=GenBank:WP_274539889.1;Name=WP_274539889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018460.7;locus_tag=CYJ01_RS05590;product=prepilin peptidase;protein_id=WP_274539889.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 73035 74303 . - . ID=gene-CYJ01_RS05595;Name=CYJ01_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05595;old_locus_tag=CYJ01_05595 NZ_PJUR01000010.1 Protein Homology CDS 73035 74303 . - 0 ID=cds-WP_015729277.1;Parent=gene-CYJ01_RS05595;Dbxref=GenBank:WP_015729277.1;Name=WP_015729277.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169487.1;locus_tag=CYJ01_RS05595;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_015729277.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 74315 76945 . - . ID=gene-CYJ01_RS05600;Name=CYJ01_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05600;old_locus_tag=CYJ01_05600 NZ_PJUR01000010.1 Protein Homology CDS 74315 76945 . - 0 ID=cds-WP_100007214.1;Parent=gene-CYJ01_RS05600;Dbxref=GenBank:WP_100007214.1;Name=WP_100007214.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=CYJ01_RS05600;product=valine--tRNA ligase;protein_id=WP_100007214.1;transl_table=11 NZ_PJUR01000010.1 cmsearch binding_site 76984 77206 . - . ID=id-NZ_PJUR01000010.1:76984..77206;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000010.1 RefSeq gene 77265 77813 . + . ID=gene-CYJ01_RS05605;Name=CYJ01_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05605;old_locus_tag=CYJ01_05605 NZ_PJUR01000010.1 Protein Homology CDS 77265 77813 . + 0 ID=cds-WP_101457347.1;Parent=gene-CYJ01_RS05605;Dbxref=GenBank:WP_101457347.1;Name=WP_101457347.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=CYJ01_RS05605;product=DNA-3-methyladenine glycosylase I;protein_id=WP_101457347.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 77898 78980 . - . ID=gene-CYJ01_RS05610;Name=CYJ01_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05610;old_locus_tag=CYJ01_05610 NZ_PJUR01000010.1 Protein Homology CDS 77898 78980 . - 0 ID=cds-WP_020219738.1;Parent=gene-CYJ01_RS05610;Dbxref=GenBank:WP_020219738.1;Name=WP_020219738.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219738.1;locus_tag=CYJ01_RS05610;product=AbrB family transcriptional regulator;protein_id=WP_020219738.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 79238 80524 . - . ID=gene-CYJ01_RS05615;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CYJ01_RS05615;old_locus_tag=CYJ01_05615 NZ_PJUR01000010.1 Protein Homology CDS 79238 80524 . - 0 ID=cds-WP_014613706.1;Parent=gene-CYJ01_RS05615;Dbxref=GenBank:WP_014613706.1;Name=WP_014613706.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638191.1;locus_tag=CYJ01_RS05615;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014613706.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 80540 81517 . - . ID=gene-CYJ01_RS05620;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05620;old_locus_tag=CYJ01_05620 NZ_PJUR01000010.1 Protein Homology CDS 80540 81517 . - 0 ID=cds-WP_014613705.1;Parent=gene-CYJ01_RS05620;Dbxref=GenBank:WP_014613705.1;Name=WP_014613705.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=CYJ01_RS05620;product=porphobilinogen synthase;protein_id=WP_014613705.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 81517 82194 . - . ID=gene-CYJ01_RS05625;Name=CYJ01_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05625;old_locus_tag=CYJ01_05625 NZ_PJUR01000010.1 Protein Homology CDS 81517 82194 . - 0 ID=cds-WP_101457351.1;Parent=gene-CYJ01_RS05625;Dbxref=GenBank:WP_101457351.1;Name=WP_101457351.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=CYJ01_RS05625;product=uroporphyrinogen-III synthase;protein_id=WP_101457351.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 82198 83127 . - . ID=gene-CYJ01_RS05630;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05630;old_locus_tag=CYJ01_05630 NZ_PJUR01000010.1 Protein Homology CDS 82198 83127 . - 0 ID=cds-WP_037542832.1;Parent=gene-CYJ01_RS05630;Dbxref=GenBank:WP_037542832.1;Name=WP_037542832.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729281.1;locus_tag=CYJ01_RS05630;product=hydroxymethylbilane synthase;protein_id=WP_037542832.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 83153 83989 . - . ID=gene-CYJ01_RS05635;Name=CYJ01_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05635;old_locus_tag=CYJ01_05635 NZ_PJUR01000010.1 Protein Homology CDS 83153 83989 . - 0 ID=cds-WP_014613702.1;Parent=gene-CYJ01_RS05635;Dbxref=GenBank:WP_014613702.1;Name=WP_014613702.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF013725.8;locus_tag=CYJ01_RS05635;product=cytochrome C assembly family protein;protein_id=WP_014613702.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 84004 85344 . - . ID=gene-CYJ01_RS05640;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05640;old_locus_tag=CYJ01_05640 NZ_PJUR01000010.1 Protein Homology CDS 84004 85344 . - 0 ID=cds-WP_101457348.1;Parent=gene-CYJ01_RS05640;Dbxref=GenBank:WP_101457348.1;Name=WP_101457348.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729283.1;locus_tag=CYJ01_RS05640;product=glutamyl-tRNA reductase;protein_id=WP_101457348.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 85499 86095 . - . ID=gene-CYJ01_RS05645;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05645;old_locus_tag=CYJ01_05645 NZ_PJUR01000010.1 Protein Homology CDS 85499 86095 . - 0 ID=cds-WP_014613700.1;Parent=gene-CYJ01_RS05645;Dbxref=GenBank:WP_014613700.1;Name=WP_014613700.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729284.1;locus_tag=CYJ01_RS05645;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014613700.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 86332 87594 . - . ID=gene-CYJ01_RS05650;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CYJ01_RS05650;old_locus_tag=CYJ01_05650 NZ_PJUR01000010.1 Protein Homology CDS 86332 87594 . - 0 ID=cds-WP_014613699.1;Parent=gene-CYJ01_RS05650;Dbxref=GenBank:WP_014613699.1;Name=WP_014613699.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CYJ01_RS05650;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_014613699.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 88167 89483 . - . ID=gene-CYJ01_RS05655;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CYJ01_RS05655;old_locus_tag=CYJ01_05655 NZ_PJUR01000010.1 Protein Homology CDS 88167 89483 . - 0 ID=cds-WP_101457349.1;Parent=gene-CYJ01_RS05655;Dbxref=GenBank:WP_101457349.1;Name=WP_101457349.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=CYJ01_RS05655;product=trigger factor;protein_id=WP_101457349.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 89571 90494 . - . ID=gene-CYJ01_RS05660;Name=CYJ01_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05660;old_locus_tag=CYJ01_05660 NZ_PJUR01000010.1 Protein Homology CDS 89571 90494 . - 0 ID=cds-WP_063284415.1;Parent=gene-CYJ01_RS05660;Dbxref=GenBank:WP_063284415.1;Name=WP_063284415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729287.1;locus_tag=CYJ01_RS05660;product=hypothetical protein;protein_id=WP_063284415.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 90504 91115 . - . ID=gene-CYJ01_RS05665;Name=CYJ01_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05665;old_locus_tag=CYJ01_05665 NZ_PJUR01000010.1 Protein Homology CDS 90504 91115 . - 0 ID=cds-WP_014613696.1;Parent=gene-CYJ01_RS05665;Dbxref=GenBank:WP_014613696.1;Name=WP_014613696.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169473.1;locus_tag=CYJ01_RS05665;product=NUDIX domain-containing protein;protein_id=WP_014613696.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 91225 91581 . - . ID=gene-CYJ01_RS05670;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CYJ01_RS05670;old_locus_tag=CYJ01_05670 NZ_PJUR01000010.1 Protein Homology CDS 91225 91581 . - 0 ID=cds-WP_014613695.1;Parent=gene-CYJ01_RS05670;Dbxref=GenBank:WP_014613695.1;Name=WP_014613695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=CYJ01_RS05670;product=50S ribosomal protein L20;protein_id=WP_014613695.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 91656 91856 . - . ID=gene-CYJ01_RS05675;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CYJ01_RS05675;old_locus_tag=CYJ01_05675 NZ_PJUR01000010.1 Protein Homology CDS 91656 91856 . - 0 ID=cds-WP_014613694.1;Parent=gene-CYJ01_RS05675;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CYJ01_RS05675;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 91882 92409 . - . ID=gene-CYJ01_RS05680;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05680;old_locus_tag=CYJ01_05680 NZ_PJUR01000010.1 Protein Homology CDS 91882 92409 . - 0 ID=cds-WP_014613693.1;Parent=gene-CYJ01_RS05680;Dbxref=GenBank:WP_014613693.1;Name=WP_014613693.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=CYJ01_RS05680;product=translation initiation factor IF-3;protein_id=WP_014613693.1;transl_table=11 NZ_PJUR01000010.1 cmsearch sequence_feature 92434 92570 . - . ID=id-NZ_PJUR01000010.1:92434..92570;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000010.1 RefSeq gene 92458 92595 . - . ID=gene-CYJ01_RS11995;Name=CYJ01_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11995 NZ_PJUR01000010.1 Protein Homology CDS 92458 92595 . - 0 ID=cds-WP_014613692.1;Parent=gene-CYJ01_RS11995;Dbxref=GenBank:WP_014613692.1;Name=WP_014613692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613692.1;locus_tag=CYJ01_RS11995;product=hypothetical protein;protein_id=WP_014613692.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 92612 94120 . - . ID=gene-CYJ01_RS05685;Name=CYJ01_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05685;old_locus_tag=CYJ01_05685 NZ_PJUR01000010.1 Protein Homology CDS 92612 94120 . - 0 ID=cds-WP_101457350.1;Parent=gene-CYJ01_RS05685;Dbxref=GenBank:WP_101457350.1;Name=WP_101457350.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613691.1;locus_tag=CYJ01_RS05685;product=amino acid permease;protein_id=WP_101457350.1;transl_table=11 NZ_PJUR01000010.1 cmsearch riboswitch 94256 94427 . - . ID=id-NZ_PJUR01000010.1:94256..94427;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000010.1 RefSeq gene 94488 96425 . - . ID=gene-CYJ01_RS05690;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05690;old_locus_tag=CYJ01_05690 NZ_PJUR01000010.1 Protein Homology CDS 94488 96425 . - 0 ID=cds-WP_014613690.1;Parent=gene-CYJ01_RS05690;Dbxref=GenBank:WP_014613690.1;Name=WP_014613690.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=CYJ01_RS05690;product=threonine--tRNA ligase;protein_id=WP_014613690.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 96743 97666 . - . ID=gene-CYJ01_RS05695;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=CYJ01_RS05695;old_locus_tag=CYJ01_05695 NZ_PJUR01000010.1 Protein Homology CDS 96743 97666 . - 0 ID=cds-WP_014613689.1;Parent=gene-CYJ01_RS05695;Dbxref=GenBank:WP_014613689.1;Name=WP_014613689.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670575.1;locus_tag=CYJ01_RS05695;product=primosomal protein DnaI;protein_id=WP_014613689.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 97666 99039 . - . ID=gene-CYJ01_RS05700;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05700;old_locus_tag=CYJ01_05700 NZ_PJUR01000010.1 Protein Homology CDS 97666 99039 . - 0 ID=cds-WP_096533285.1;Parent=gene-CYJ01_RS05700;Dbxref=GenBank:WP_096533285.1;Name=WP_096533285.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=CYJ01_RS05700;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_096533285.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 99043 99510 . - . ID=gene-CYJ01_RS05705;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CYJ01_RS05705;old_locus_tag=CYJ01_05705 NZ_PJUR01000010.1 Protein Homology CDS 99043 99510 . - 0 ID=cds-WP_014613687.1;Parent=gene-CYJ01_RS05705;Dbxref=GenBank:WP_014613687.1;Name=WP_014613687.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=CYJ01_RS05705;product=transcriptional regulator NrdR;protein_id=WP_014613687.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 99708 100724 . - . ID=gene-CYJ01_RS05710;Name=CYJ01_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05710;old_locus_tag=CYJ01_05710 NZ_PJUR01000010.1 Protein Homology CDS 99708 100724 . - 0 ID=cds-WP_037542830.1;Parent=gene-CYJ01_RS05710;Dbxref=GenBank:WP_037542830.1;Name=WP_037542830.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=CYJ01_RS05710;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037542830.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 100931 101554 . - . ID=gene-CYJ01_RS05715;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05715;old_locus_tag=CYJ01_05715 NZ_PJUR01000010.1 Protein Homology CDS 100931 101554 . - 0 ID=cds-WP_014613685.1;Parent=gene-CYJ01_RS05715;Dbxref=GenBank:WP_014613685.1;Name=WP_014613685.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613685.1;locus_tag=CYJ01_RS05715;product=dephospho-CoA kinase;protein_id=WP_014613685.1;transl_table=11 NZ_PJUR01000010.1 RefSeq gene 101568 102440 . - . ID=gene-CYJ01_RS05720;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CYJ01_RS05720;old_locus_tag=CYJ01_05720 NZ_PJUR01000010.1 Protein Homology CDS 101568 102440 . - 0 ID=cds-WP_014613684.1;Parent=gene-CYJ01_RS05720;Dbxref=GenBank:WP_014613684.1;Name=WP_014613684.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=CYJ01_RS05720;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_014613684.1;transl_table=11 NZ_PJUR01000010.1 RefSeq pseudogene 102460 104614 . - . ID=gene-CYJ01_RS05725;Name=polA;end_range=104614,.;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=CYJ01_RS05725;old_locus_tag=CYJ01_05725;partial=true;pseudo=true NZ_PJUR01000010.1 Protein Homology CDS 102460 104614 . - 0 ID=cds-CYJ01_RS05725;Parent=gene-CYJ01_RS05725;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;end_range=104614,.;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=CYJ01_RS05725;partial=true;product=DNA polymerase I;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000095.1 1 221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000095.1 RefSeq region 1 221 . + . ID=NZ_PJUR01000095.1:1..221;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N ##sequence-region NZ_PJUR01000011.1 1 73073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000011.1 RefSeq region 1 73073 . + . ID=NZ_PJUR01000011.1:1..73073;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000011.1 RefSeq gene 329 1012 . - . ID=gene-CYJ01_RS05730;Name=CYJ01_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05730;old_locus_tag=CYJ01_05730 NZ_PJUR01000011.1 Protein Homology CDS 329 1012 . - 0 ID=cds-WP_014614720.1;Parent=gene-CYJ01_RS05730;Dbxref=GenBank:WP_014614720.1;Name=WP_014614720.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219923.1;locus_tag=CYJ01_RS05730;product=flavin reductase family protein;protein_id=WP_014614720.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 1577 2125 . - . ID=gene-CYJ01_RS05735;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05735;old_locus_tag=CYJ01_05735 NZ_PJUR01000011.1 Protein Homology CDS 1577 2125 . - 0 ID=cds-WP_100006677.1;Parent=gene-CYJ01_RS05735;Dbxref=GenBank:WP_100006677.1;Name=WP_100006677.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169036.1;locus_tag=CYJ01_RS05735;product=6-phospho-3-hexuloisomerase;protein_id=WP_100006677.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 2127 2765 . - . ID=gene-CYJ01_RS05740;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05740;old_locus_tag=CYJ01_05740 NZ_PJUR01000011.1 Protein Homology CDS 2127 2765 . - 0 ID=cds-WP_101457352.1;Parent=gene-CYJ01_RS05740;Dbxref=GenBank:WP_101457352.1;Name=WP_101457352.1;Ontology_term=GO:0005975,GO:0019647,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation via ribulose monophosphate cycle|0019647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CYJ01_RS05740;product=3-hexulose-6-phosphate synthase;protein_id=WP_101457352.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 2864 3598 . - . ID=gene-CYJ01_RS05745;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05745;old_locus_tag=CYJ01_05745 NZ_PJUR01000011.1 Protein Homology CDS 2864 3598 . - 0 ID=cds-WP_014614723.1;Parent=gene-CYJ01_RS05745;Dbxref=GenBank:WP_014614723.1;Name=WP_014614723.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614723.1;locus_tag=CYJ01_RS05745;product=glucosamine-6-phosphate deaminase;protein_id=WP_014614723.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 3604 4278 . - . ID=gene-CYJ01_RS05750;Name=CYJ01_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05750;old_locus_tag=CYJ01_05750 NZ_PJUR01000011.1 Protein Homology CDS 3604 4278 . - 0 ID=cds-WP_014614724.1;Parent=gene-CYJ01_RS05750;Dbxref=GenBank:WP_014614724.1;Name=WP_014614724.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728633.1;locus_tag=CYJ01_RS05750;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_014614724.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 4279 5817 . - . ID=gene-CYJ01_RS05755;Name=CYJ01_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05755;old_locus_tag=CYJ01_05755 NZ_PJUR01000011.1 Protein Homology CDS 4279 5817 . - 0 ID=cds-WP_101431457.1;Parent=gene-CYJ01_RS05755;Dbxref=GenBank:WP_101431457.1;Name=WP_101431457.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166666.1;locus_tag=CYJ01_RS05755;product=PTS transporter subunit EIIC;protein_id=WP_101431457.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 5937 6776 . + . ID=gene-CYJ01_RS05760;Name=CYJ01_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05760;old_locus_tag=CYJ01_05760 NZ_PJUR01000011.1 Protein Homology CDS 5937 6776 . + 0 ID=cds-WP_063278639.1;Parent=gene-CYJ01_RS05760;Dbxref=GenBank:WP_063278639.1;Name=WP_063278639.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728631.1;locus_tag=CYJ01_RS05760;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063278639.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 6862 7221 . + . ID=gene-CYJ01_RS05765;Name=CYJ01_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05765;old_locus_tag=CYJ01_05765 NZ_PJUR01000011.1 Protein Homology CDS 6862 7221 . + 0 ID=cds-WP_014614727.1;Parent=gene-CYJ01_RS05765;Dbxref=GenBank:WP_014614727.1;Name=WP_014614727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166668.1;locus_tag=CYJ01_RS05765;product=YojF family protein;protein_id=WP_014614727.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 7240 7917 . + . ID=gene-CYJ01_RS05770;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CYJ01_RS05770;old_locus_tag=CYJ01_05770 NZ_PJUR01000011.1 Protein Homology CDS 7240 7917 . + 0 ID=cds-WP_041613367.1;Parent=gene-CYJ01_RS05770;Dbxref=GenBank:WP_041613367.1;Name=WP_041613367.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169043.1;locus_tag=CYJ01_RS05770;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_041613367.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 7963 8841 . + . ID=gene-CYJ01_RS05775;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=CYJ01_RS05775;old_locus_tag=CYJ01_05775 NZ_PJUR01000011.1 Protein Homology CDS 7963 8841 . + 0 ID=cds-WP_014614729.1;Parent=gene-CYJ01_RS05775;Dbxref=GenBank:WP_014614729.1;Name=WP_014614729.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CYJ01_RS05775;product=GTP cyclohydrolase FolE2;protein_id=WP_014614729.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 8999 9661 . - . ID=gene-CYJ01_RS05780;Name=CYJ01_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05780;old_locus_tag=CYJ01_05780 NZ_PJUR01000011.1 Protein Homology CDS 8999 9661 . - 0 ID=cds-WP_014614730.1;Parent=gene-CYJ01_RS05780;Dbxref=GenBank:WP_014614730.1;Name=WP_014614730.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166671.1;locus_tag=CYJ01_RS05780;product=ATP-binding cassette domain-containing protein;protein_id=WP_014614730.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 9661 11856 . - . ID=gene-CYJ01_RS05785;Name=CYJ01_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05785;old_locus_tag=CYJ01_05785 NZ_PJUR01000011.1 Protein Homology CDS 9661 11856 . - 0 ID=cds-WP_101457353.1;Parent=gene-CYJ01_RS05785;Dbxref=GenBank:WP_101457353.1;Name=WP_101457353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166672.1;locus_tag=CYJ01_RS05785;product=amino acid ABC transporter permease;protein_id=WP_101457353.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 11876 12094 . - . ID=gene-CYJ01_RS05790;Name=CYJ01_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05790;old_locus_tag=CYJ01_05790 NZ_PJUR01000011.1 GeneMarkS-2+ CDS 11876 12094 . - 0 ID=cds-WP_049773686.1;Parent=gene-CYJ01_RS05790;Dbxref=GenBank:WP_049773686.1;Name=WP_049773686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS05790;product=hypothetical protein;protein_id=WP_049773686.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 12313 13179 . - . ID=gene-CYJ01_RS05795;Name=CYJ01_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05795;old_locus_tag=CYJ01_05795 NZ_PJUR01000011.1 Protein Homology CDS 12313 13179 . - 0 ID=cds-WP_020219930.1;Parent=gene-CYJ01_RS05795;Dbxref=GenBank:WP_020219930.1;Name=WP_020219930.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728626.1;locus_tag=CYJ01_RS05795;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_020219930.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 13341 13814 . - . ID=gene-CYJ01_RS05800;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05800;old_locus_tag=CYJ01_05800 NZ_PJUR01000011.1 Protein Homology CDS 13341 13814 . - 0 ID=cds-WP_014614733.1;Parent=gene-CYJ01_RS05800;Dbxref=GenBank:WP_014614733.1;Name=WP_014614733.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614733.1;locus_tag=CYJ01_RS05800;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014614733.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 13884 14507 . + . ID=gene-CYJ01_RS05805;Name=CYJ01_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05805;old_locus_tag=CYJ01_05805 NZ_PJUR01000011.1 Protein Homology CDS 13884 14507 . + 0 ID=cds-WP_014614734.1;Parent=gene-CYJ01_RS05805;Dbxref=GenBank:WP_014614734.1;Name=WP_014614734.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614734.1;locus_tag=CYJ01_RS05805;product=deoxynucleoside kinase;protein_id=WP_014614734.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 14494 15159 . + . ID=gene-CYJ01_RS05810;Name=CYJ01_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05810;old_locus_tag=CYJ01_05810 NZ_PJUR01000011.1 Protein Homology CDS 14494 15159 . + 0 ID=cds-WP_014614735.1;Parent=gene-CYJ01_RS05810;Dbxref=GenBank:WP_014614735.1;Name=WP_014614735.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728623.1;locus_tag=CYJ01_RS05810;product=deoxynucleoside kinase;protein_id=WP_014614735.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 15712 16410 . - . ID=gene-CYJ01_RS05815;Name=CYJ01_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05815;old_locus_tag=CYJ01_05815 NZ_PJUR01000011.1 Protein Homology CDS 15712 16410 . - 0 ID=cds-WP_101457354.1;Parent=gene-CYJ01_RS05815;Dbxref=GenBank:WP_101457354.1;Name=WP_101457354.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614736.1;locus_tag=CYJ01_RS05815;product=HAD family hydrolase;protein_id=WP_101457354.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 16648 17640 . + . ID=gene-CYJ01_RS05820;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=CYJ01_RS05820;old_locus_tag=CYJ01_05820 NZ_PJUR01000011.1 Protein Homology CDS 16648 17640 . + 0 ID=cds-WP_014614737.1;Parent=gene-CYJ01_RS05820;Dbxref=GenBank:WP_014614737.1;Name=WP_014614737.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614737.1;locus_tag=CYJ01_RS05820;product=sphingomyelin phosphodiesterase;protein_id=WP_014614737.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 18350 19432 . - . ID=gene-CYJ01_RS05825;Name=CYJ01_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05825;old_locus_tag=CYJ01_05825 NZ_PJUR01000011.1 Protein Homology CDS 18350 19432 . - 0 ID=cds-WP_101457355.1;Parent=gene-CYJ01_RS05825;Dbxref=GenBank:WP_101457355.1;Name=WP_101457355.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166637.1;locus_tag=CYJ01_RS05825;product=branched-chain amino acid aminotransferase;protein_id=WP_101457355.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 19871 20212 . - . ID=gene-CYJ01_RS12255;Name=CYJ01_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12255 NZ_PJUR01000011.1 Protein Homology CDS 19871 20212 . - 0 ID=cds-WP_257976141.1;Parent=gene-CYJ01_RS12255;Dbxref=GenBank:WP_257976141.1;Name=WP_257976141.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ01_RS12255;product=ATP-binding cassette domain-containing protein;protein_id=WP_257976141.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 20457 21713 . + . ID=gene-CYJ01_RS05835;Name=CYJ01_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05835;old_locus_tag=CYJ01_05835 NZ_PJUR01000011.1 Protein Homology CDS 20457 21713 . + 0 ID=cds-WP_101457356.1;Parent=gene-CYJ01_RS05835;Dbxref=GenBank:WP_101457356.1;Name=WP_101457356.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614739.1;locus_tag=CYJ01_RS05835;product=MDR family MFS transporter;protein_id=WP_101457356.1;transl_table=11 NZ_PJUR01000011.1 RefSeq pseudogene 21899 22342 . - . ID=gene-CYJ01_RS05840;Name=tnpA;end_range=22342,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CYJ01_RS05840;old_locus_tag=CYJ01_05840;partial=true;pseudo=true NZ_PJUR01000011.1 Protein Homology CDS 21899 22342 . - 0 ID=cds-CYJ01_RS05840;Parent=gene-CYJ01_RS05840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=22342,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ01_RS05840;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 22537 23496 . - . ID=gene-CYJ01_RS05845;Name=CYJ01_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05845;old_locus_tag=CYJ01_05845 NZ_PJUR01000011.1 Protein Homology CDS 22537 23496 . - 0 ID=cds-WP_014614740.1;Parent=gene-CYJ01_RS05845;Dbxref=GenBank:WP_014614740.1;Name=WP_014614740.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=CYJ01_RS05845;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_014614740.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 23704 24894 . - . ID=gene-CYJ01_RS05850;Name=CYJ01_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05850;old_locus_tag=CYJ01_05850 NZ_PJUR01000011.1 Protein Homology CDS 23704 24894 . - 0 ID=cds-WP_031253851.1;Parent=gene-CYJ01_RS05850;Dbxref=GenBank:WP_031253851.1;Name=WP_031253851.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=CYJ01_RS05850;product=glycine C-acetyltransferase;protein_id=WP_031253851.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 25004 26191 . + . ID=gene-CYJ01_RS05855;Name=CYJ01_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05855;old_locus_tag=CYJ01_05855 NZ_PJUR01000011.1 Protein Homology CDS 25004 26191 . + 0 ID=cds-WP_014614742.1;Parent=gene-CYJ01_RS05855;Dbxref=GenBank:WP_014614742.1;Name=WP_014614742.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614742.1;locus_tag=CYJ01_RS05855;product=amidohydrolase;protein_id=WP_014614742.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 26777 27481 . + . ID=gene-CYJ01_RS05860;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05860;old_locus_tag=CYJ01_05860 NZ_PJUR01000011.1 Protein Homology CDS 26777 27481 . + 0 ID=cds-WP_101457357.1;Parent=gene-CYJ01_RS05860;Dbxref=GenBank:WP_101457357.1;Name=WP_101457357.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=CYJ01_RS05860;product=acetolactate decarboxylase;protein_id=WP_101457357.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 27594 28781 . - . ID=gene-CYJ01_RS05865;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CYJ01_RS05865;old_locus_tag=CYJ01_05865 NZ_PJUR01000011.1 Protein Homology CDS 27594 28781 . - 0 ID=cds-WP_014614744.1;Parent=gene-CYJ01_RS05865;Dbxref=GenBank:WP_014614744.1;Name=WP_014614744.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166641.1;locus_tag=CYJ01_RS05865;product=elongation factor Tu;protein_id=WP_014614744.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 28963 31044 . - . ID=gene-CYJ01_RS05870;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05870;old_locus_tag=CYJ01_05870 NZ_PJUR01000011.1 Protein Homology CDS 28963 31044 . - 0 ID=cds-WP_014614745.1;Parent=gene-CYJ01_RS05870;Dbxref=GenBank:WP_014614745.1;Name=WP_014614745.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=CYJ01_RS05870;product=elongation factor G;protein_id=WP_014614745.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 31187 31657 . - . ID=gene-CYJ01_RS05875;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CYJ01_RS05875;old_locus_tag=CYJ01_05875 NZ_PJUR01000011.1 Protein Homology CDS 31187 31657 . - 0 ID=cds-WP_014614746.1;Parent=gene-CYJ01_RS05875;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CYJ01_RS05875;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 31738 32151 . - . ID=gene-CYJ01_RS05880;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CYJ01_RS05880;old_locus_tag=CYJ01_05880 NZ_PJUR01000011.1 Protein Homology CDS 31738 32151 . - 0 ID=cds-WP_014614747.1;Parent=gene-CYJ01_RS05880;Dbxref=GenBank:WP_014614747.1;Name=WP_014614747.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=CYJ01_RS05880;product=30S ribosomal protein S12;protein_id=WP_014614747.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 32247 32501 . - . ID=gene-CYJ01_RS05885;Name=CYJ01_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05885;old_locus_tag=CYJ01_05885 NZ_PJUR01000011.1 Protein Homology CDS 32247 32501 . - 0 ID=cds-WP_014614748.1;Parent=gene-CYJ01_RS05885;Dbxref=GenBank:WP_014614748.1;Name=WP_014614748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=CYJ01_RS05885;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_014614748.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 32679 36299 . - . ID=gene-CYJ01_RS05890;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CYJ01_RS05890;old_locus_tag=CYJ01_05890 NZ_PJUR01000011.1 Protein Homology CDS 32679 36299 . - 0 ID=cds-WP_014614749.1;Parent=gene-CYJ01_RS05890;Dbxref=GenBank:WP_014614749.1;Name=WP_014614749.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=CYJ01_RS05890;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_014614749.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 36534 40088 . - . ID=gene-CYJ01_RS05895;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05895;old_locus_tag=CYJ01_05895 NZ_PJUR01000011.1 Protein Homology CDS 36534 40088 . - 0 ID=cds-WP_014614750.1;Parent=gene-CYJ01_RS05895;Dbxref=GenBank:WP_014614750.1;Name=WP_014614750.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614750.1;locus_tag=CYJ01_RS05895;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_014614750.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 40301 40909 . - . ID=gene-CYJ01_RS05900;Name=CYJ01_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05900;old_locus_tag=CYJ01_05900 NZ_PJUR01000011.1 Protein Homology CDS 40301 40909 . - 0 ID=cds-WP_014614751.1;Parent=gene-CYJ01_RS05900;Dbxref=GenBank:WP_014614751.1;Name=WP_014614751.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614751.1;locus_tag=CYJ01_RS05900;product=class I SAM-dependent methyltransferase;protein_id=WP_014614751.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 40987 41352 . - . ID=gene-CYJ01_RS05905;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CYJ01_RS05905;old_locus_tag=CYJ01_05905 NZ_PJUR01000011.1 Protein Homology CDS 40987 41352 . - 0 ID=cds-WP_014614752.1;Parent=gene-CYJ01_RS05905;Dbxref=GenBank:WP_014614752.1;Name=WP_014614752.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CYJ01_RS05905;product=50S ribosomal protein L7/L12;protein_id=WP_014614752.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 41393 41893 . - . ID=gene-CYJ01_RS05910;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS05910;old_locus_tag=CYJ01_05910 NZ_PJUR01000011.1 Protein Homology CDS 41393 41893 . - 0 ID=cds-WP_014614753.1;Parent=gene-CYJ01_RS05910;Dbxref=GenBank:WP_014614753.1;Name=WP_014614753.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=CYJ01_RS05910;product=50S ribosomal protein L10;protein_id=WP_014614753.1;transl_table=11 NZ_PJUR01000011.1 cmsearch sequence_feature 41943 42083 . - . ID=id-NZ_PJUR01000011.1:41943..42083;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000011.1 RefSeq gene 42181 42876 . - . ID=gene-CYJ01_RS05915;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05915;old_locus_tag=CYJ01_05915 NZ_PJUR01000011.1 Protein Homology CDS 42181 42876 . - 0 ID=cds-WP_014614754.1;Parent=gene-CYJ01_RS05915;Dbxref=GenBank:WP_014614754.1;Name=WP_014614754.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CYJ01_RS05915;product=50S ribosomal protein L1;protein_id=WP_014614754.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 43068 43490 . - . ID=gene-CYJ01_RS05920;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CYJ01_RS05920;old_locus_tag=CYJ01_05920 NZ_PJUR01000011.1 Protein Homology CDS 43068 43490 . - 0 ID=cds-WP_014614755.1;Parent=gene-CYJ01_RS05920;Dbxref=GenBank:WP_014614755.1;Name=WP_014614755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CYJ01_RS05920;product=50S ribosomal protein L11;protein_id=WP_014614755.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 43655 44203 . - . ID=gene-CYJ01_RS05925;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CYJ01_RS05925;old_locus_tag=CYJ01_05925 NZ_PJUR01000011.1 Protein Homology CDS 43655 44203 . - 0 ID=cds-WP_014614756.1;Parent=gene-CYJ01_RS05925;Dbxref=GenBank:WP_014614756.1;Name=WP_014614756.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CYJ01_RS05925;product=transcription termination/antitermination protein NusG;protein_id=WP_014614756.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 44222 44401 . - . ID=gene-CYJ01_RS05930;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05930;old_locus_tag=CYJ01_05930 NZ_PJUR01000011.1 Protein Homology CDS 44222 44401 . - 0 ID=cds-WP_014614757.1;Parent=gene-CYJ01_RS05930;Dbxref=GenBank:WP_014614757.1;Name=WP_014614757.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=CYJ01_RS05930;product=preprotein translocase subunit SecE;protein_id=WP_014614757.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 44419 44562 . - . ID=gene-CYJ01_RS05935;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ01_RS05935;old_locus_tag=CYJ01_05935 NZ_PJUR01000011.1 Protein Homology CDS 44419 44562 . - 0 ID=cds-WP_075773636.1;Parent=gene-CYJ01_RS05935;Dbxref=GenBank:WP_075773636.1;Name=WP_075773636.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=CYJ01_RS05935;product=50S ribosomal protein L33;protein_id=WP_075773636.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 44634 45206 . - . ID=gene-CYJ01_RS05940;Name=CYJ01_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05940;old_locus_tag=CYJ01_05940 NZ_PJUR01000011.1 Protein Homology CDS 44634 45206 . - 0 ID=cds-WP_063278648.1;Parent=gene-CYJ01_RS05940;Dbxref=GenBank:WP_063278648.1;Name=WP_063278648.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728609.1;locus_tag=CYJ01_RS05940;product=RNA polymerase sigma factor;protein_id=WP_063278648.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 45283 45807 . - . ID=gene-CYJ01_RS05945;Name=CYJ01_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05945;old_locus_tag=CYJ01_05945 NZ_PJUR01000011.1 Protein Homology CDS 45283 45807 . - 0 ID=cds-WP_031253855.1;Parent=gene-CYJ01_RS05945;Dbxref=GenBank:WP_031253855.1;Name=WP_031253855.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424292.1;locus_tag=CYJ01_RS05945;product=NYN domain-containing protein;protein_id=WP_031253855.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 45811 46560 . - . ID=gene-CYJ01_RS05950;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05950;old_locus_tag=CYJ01_05950 NZ_PJUR01000011.1 Protein Homology CDS 45811 46560 . - 0 ID=cds-WP_014614761.1;Parent=gene-CYJ01_RS05950;Dbxref=GenBank:WP_014614761.1;Name=WP_014614761.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=CYJ01_RS05950;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_014614761.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 46566 46967 . - . ID=gene-CYJ01_RS05955;Name=CYJ01_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05955;old_locus_tag=CYJ01_05955 NZ_PJUR01000011.1 Protein Homology CDS 46566 46967 . - 0 ID=cds-WP_014614762.1;Parent=gene-CYJ01_RS05955;Dbxref=GenBank:WP_014614762.1;Name=WP_014614762.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=CYJ01_RS05955;product=Mini-ribonuclease 3;protein_id=WP_014614762.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 46960 48360 . - . ID=gene-CYJ01_RS05960;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05960;old_locus_tag=CYJ01_05960 NZ_PJUR01000011.1 Protein Homology CDS 46960 48360 . - 0 ID=cds-WP_014614763.1;Parent=gene-CYJ01_RS05960;Dbxref=GenBank:WP_014614763.1;Name=WP_014614763.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=CYJ01_RS05960;product=cysteine--tRNA ligase;protein_id=WP_014614763.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 48344 49009 . - . ID=gene-CYJ01_RS05965;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CYJ01_RS05965;old_locus_tag=CYJ01_05965 NZ_PJUR01000011.1 Protein Homology CDS 48344 49009 . - 0 ID=cds-WP_172426181.1;Parent=gene-CYJ01_RS05965;Dbxref=GenBank:WP_172426181.1;Name=WP_172426181.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723047.1;locus_tag=CYJ01_RS05965;product=serine O-acetyltransferase;protein_id=WP_172426181.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 49397 50851 . - . ID=gene-CYJ01_RS05970;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CYJ01_RS05970;old_locus_tag=CYJ01_05970 NZ_PJUR01000011.1 Protein Homology CDS 49397 50851 . - 0 ID=cds-WP_101457358.1;Parent=gene-CYJ01_RS05970;Dbxref=GenBank:WP_101457358.1;Name=WP_101457358.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465549.1;locus_tag=CYJ01_RS05970;product=glutamate--tRNA ligase;protein_id=WP_101457358.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 50928 51407 . - . ID=gene-CYJ01_RS05975;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CYJ01_RS05975;old_locus_tag=CYJ01_05975 NZ_PJUR01000011.1 Protein Homology CDS 50928 51407 . - 0 ID=cds-WP_014614766.1;Parent=gene-CYJ01_RS05975;Dbxref=GenBank:WP_014614766.1;Name=WP_014614766.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614766.1;locus_tag=CYJ01_RS05975;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_014614766.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 51400 52098 . - . ID=gene-CYJ01_RS05980;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CYJ01_RS05980;old_locus_tag=CYJ01_05980 NZ_PJUR01000011.1 Protein Homology CDS 51400 52098 . - 0 ID=cds-WP_014614767.1;Parent=gene-CYJ01_RS05980;Dbxref=GenBank:WP_014614767.1;Name=WP_014614767.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=CYJ01_RS05980;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_014614767.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 52099 53160 . - . ID=gene-CYJ01_RS05985;Name=CYJ01_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05985;old_locus_tag=CYJ01_05985 NZ_PJUR01000011.1 Protein Homology CDS 52099 53160 . - 0 ID=cds-WP_014614768.1;Parent=gene-CYJ01_RS05985;Dbxref=GenBank:WP_014614768.1;Name=WP_014614768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614768.1;locus_tag=CYJ01_RS05985;product=PIN/TRAM domain-containing protein;protein_id=WP_014614768.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 53179 54549 . - . ID=gene-CYJ01_RS05990;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CYJ01_RS05990;old_locus_tag=CYJ01_05990 NZ_PJUR01000011.1 Protein Homology CDS 53179 54549 . - 0 ID=cds-WP_014614769.1;Parent=gene-CYJ01_RS05990;Dbxref=GenBank:WP_014614769.1;Name=WP_014614769.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166689.1;locus_tag=CYJ01_RS05990;product=DNA repair protein RadA;protein_id=WP_014614769.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 54948 55694 . - . ID=gene-CYJ01_RS05995;Name=CYJ01_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05995;old_locus_tag=CYJ01_05995 NZ_PJUR01000011.1 Protein Homology CDS 54948 55694 . - 0 ID=cds-WP_015728605.1;Parent=gene-CYJ01_RS05995;Dbxref=GenBank:WP_015728605.1;Name=WP_015728605.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728605.1;locus_tag=CYJ01_RS05995;product=ABC transporter permease;protein_id=WP_015728605.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 55681 56385 . - . ID=gene-CYJ01_RS06000;Name=CYJ01_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06000;old_locus_tag=CYJ01_06000 NZ_PJUR01000011.1 Protein Homology CDS 55681 56385 . - 0 ID=cds-WP_101457359.1;Parent=gene-CYJ01_RS06000;Dbxref=GenBank:WP_101457359.1;Name=WP_101457359.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614771.1;locus_tag=CYJ01_RS06000;product=ABC transporter ATP-binding protein;protein_id=WP_101457359.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 56400 57359 . - . ID=gene-CYJ01_RS06005;Name=CYJ01_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06005;old_locus_tag=CYJ01_06005 NZ_PJUR01000011.1 Protein Homology CDS 56400 57359 . - 0 ID=cds-WP_241538684.1;Parent=gene-CYJ01_RS06005;Dbxref=GenBank:WP_241538684.1;Name=WP_241538684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614772.1;locus_tag=CYJ01_RS06005;product=hypothetical protein;protein_id=WP_241538684.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 57359 58171 . - . ID=gene-CYJ01_RS06010;Name=CYJ01_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06010;old_locus_tag=CYJ01_06010 NZ_PJUR01000011.1 Protein Homology CDS 57359 58171 . - 0 ID=cds-WP_037543946.1;Parent=gene-CYJ01_RS06010;Dbxref=GenBank:WP_037543946.1;Name=WP_037543946.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614773.1;locus_tag=CYJ01_RS06010;product=SagB family peptide dehydrogenase;protein_id=WP_037543946.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 58191 59411 . - . ID=gene-CYJ01_RS06015;Name=CYJ01_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06015;old_locus_tag=CYJ01_06015 NZ_PJUR01000011.1 Protein Homology CDS 58191 59411 . - 0 ID=cds-WP_101457360.1;Parent=gene-CYJ01_RS06015;Dbxref=GenBank:WP_101457360.1;Name=WP_101457360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614774.1;locus_tag=CYJ01_RS06015;product=YcaO-like family protein;protein_id=WP_101457360.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 59408 60259 . - . ID=gene-CYJ01_RS06020;Name=CYJ01_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06020;old_locus_tag=CYJ01_06020 NZ_PJUR01000011.1 Protein Homology CDS 59408 60259 . - 0 ID=cds-WP_037543948.1;Parent=gene-CYJ01_RS06020;Dbxref=GenBank:WP_037543948.1;Name=WP_037543948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728602.1;locus_tag=CYJ01_RS06020;product=hypothetical protein;protein_id=WP_037543948.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 60940 63399 . - . ID=gene-CYJ01_RS06025;Name=CYJ01_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06025;old_locus_tag=CYJ01_06025 NZ_PJUR01000011.1 Protein Homology CDS 60940 63399 . - 0 ID=cds-WP_014614776.1;Parent=gene-CYJ01_RS06025;Dbxref=GenBank:WP_014614776.1;Name=WP_014614776.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499078.1;locus_tag=CYJ01_RS06025;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_014614776.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 63415 64419 . - . ID=gene-CYJ01_RS06030;Name=CYJ01_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06030;old_locus_tag=CYJ01_06030 NZ_PJUR01000011.1 Protein Homology CDS 63415 64419 . - 0 ID=cds-WP_015728601.1;Parent=gene-CYJ01_RS06030;Dbxref=GenBank:WP_015728601.1;Name=WP_015728601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169090.1;locus_tag=CYJ01_RS06030;product=protein arginine kinase;protein_id=WP_015728601.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 64409 64939 . - . ID=gene-CYJ01_RS06035;Name=CYJ01_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06035;old_locus_tag=CYJ01_06035 NZ_PJUR01000011.1 Protein Homology CDS 64409 64939 . - 0 ID=cds-WP_014614778.1;Parent=gene-CYJ01_RS06035;Dbxref=GenBank:WP_014614778.1;Name=WP_014614778.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169091.1;locus_tag=CYJ01_RS06035;product=UvrB/UvrC motif-containing protein;protein_id=WP_014614778.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 64953 65414 . - . ID=gene-CYJ01_RS06040;Name=CYJ01_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06040;old_locus_tag=CYJ01_06040 NZ_PJUR01000011.1 Protein Homology CDS 64953 65414 . - 0 ID=cds-WP_014614779.1;Parent=gene-CYJ01_RS06040;Dbxref=GenBank:WP_014614779.1;Name=WP_014614779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CYJ01_RS06040;product=CtsR family transcriptional regulator;protein_id=WP_014614779.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 65579 66784 . + . ID=gene-CYJ01_RS06045;Name=CYJ01_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06045;old_locus_tag=CYJ01_06045 NZ_PJUR01000011.1 Protein Homology CDS 65579 66784 . + 0 ID=cds-WP_014614780.1;Parent=gene-CYJ01_RS06045;Dbxref=GenBank:WP_014614780.1;Name=WP_014614780.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CYJ01_RS06045;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014614780.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 67420 68415 . - . ID=gene-CYJ01_RS06050;Name=CYJ01_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06050;old_locus_tag=CYJ01_06050 NZ_PJUR01000011.1 Protein Homology CDS 67420 68415 . - 0 ID=cds-WP_101457361.1;Parent=gene-CYJ01_RS06050;Dbxref=GenBank:WP_101457361.1;Name=WP_101457361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424986.1;locus_tag=CYJ01_RS06050;product=hypothetical protein;protein_id=WP_101457361.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 68428 68736 . - . ID=gene-CYJ01_RS06055;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CYJ01_RS06055;old_locus_tag=CYJ01_06055 NZ_PJUR01000011.1 Protein Homology CDS 68428 68736 . - 0 ID=cds-WP_101457362.1;Parent=gene-CYJ01_RS06055;Dbxref=GenBank:WP_101457362.1;Name=WP_101457362.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573636.1;locus_tag=CYJ01_RS06055;product=CRISPR-associated endonuclease Cas2;protein_id=WP_101457362.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 68741 69643 . - . ID=gene-CYJ01_RS06060;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=CYJ01_RS06060;old_locus_tag=CYJ01_06060 NZ_PJUR01000011.1 Protein Homology CDS 68741 69643 . - 0 ID=cds-WP_101457363.1;Parent=gene-CYJ01_RS06060;Dbxref=GenBank:WP_101457363.1;Name=WP_101457363.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460847.1;locus_tag=CYJ01_RS06060;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_101457363.1;transl_table=11 NZ_PJUR01000011.1 RefSeq gene 69643 72810 . - . ID=gene-CYJ01_RS06065;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=CYJ01_RS06065;old_locus_tag=CYJ01_06065 NZ_PJUR01000011.1 Protein Homology CDS 69643 72810 . - 0 ID=cds-WP_101457364.1;Parent=gene-CYJ01_RS06065;Dbxref=GenBank:WP_101457364.1;Name=WP_101457364.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460848.1;locus_tag=CYJ01_RS06065;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_101457364.1;transl_table=11 ##sequence-region NZ_PJUR01000096.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000096.1 RefSeq region 1 260 . + . ID=NZ_PJUR01000096.1:1..260;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N ##sequence-region NZ_PJUR01000012.1 1 82834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000012.1 RefSeq region 1 82834 . + . ID=NZ_PJUR01000012.1:1..82834;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000012.1 RefSeq gene 158 1447 . + . ID=gene-CYJ01_RS06070;Name=CYJ01_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06070;old_locus_tag=CYJ01_06070 NZ_PJUR01000012.1 Protein Homology CDS 158 1447 . + 0 ID=cds-WP_101457365.1;Parent=gene-CYJ01_RS06070;Dbxref=GenBank:WP_101457365.1;Name=WP_101457365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=CYJ01_RS06070;product=glycosyltransferase;protein_id=WP_101457365.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 1519 1827 . + . ID=gene-CYJ01_RS06075;Name=CYJ01_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06075;old_locus_tag=CYJ01_06075 NZ_PJUR01000012.1 Protein Homology CDS 1519 1827 . + 0 ID=cds-WP_063284913.1;Parent=gene-CYJ01_RS06075;Dbxref=GenBank:WP_063284913.1;Name=WP_063284913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024424.7;locus_tag=CYJ01_RS06075;product=DUF3884 family protein;protein_id=WP_063284913.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 2202 2393 . + . ID=gene-CYJ01_RS12415;Name=CYJ01_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12415 NZ_PJUR01000012.1 Protein Homology CDS 2202 2393 . + 0 ID=cds-WP_197737724.1;Parent=gene-CYJ01_RS12415;Dbxref=GenBank:WP_197737724.1;Name=WP_197737724.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ01_RS12415;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_197737724.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 2317 2514 . + . ID=gene-CYJ01_RS12420;Name=CYJ01_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12420 NZ_PJUR01000012.1 Protein Homology CDS 2317 2514 . + 0 ID=cds-WP_197737723.1;Parent=gene-CYJ01_RS12420;Dbxref=GenBank:WP_197737723.1;Name=WP_197737723.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ01_RS12420;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_197737723.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 2541 2789 . + . ID=gene-CYJ01_RS12425;Name=CYJ01_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12425 NZ_PJUR01000012.1 Protein Homology CDS 2541 2789 . + 0 ID=cds-WP_274539890.1;Parent=gene-CYJ01_RS12425;Dbxref=GenBank:WP_274539890.1;Name=WP_274539890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ01_RS12425;product=hypothetical protein;protein_id=WP_274539890.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 2746 4359 . + . ID=gene-CYJ01_RS06085;Name=CYJ01_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06085;old_locus_tag=CYJ01_06085 NZ_PJUR01000012.1 Protein Homology CDS 2746 4359 . + 0 ID=cds-WP_274539891.1;Parent=gene-CYJ01_RS06085;Dbxref=GenBank:WP_274539891.1;Name=WP_274539891.1;Ontology_term=GO:0043213,GO:0008234,GO:0043214,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,ABC-type bacteriocin transporter activity|0043214||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: protein motif:HMM:TIGR01193.1;locus_tag=CYJ01_RS06085;product=peptide cleavage/export ABC transporter;protein_id=WP_274539891.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 4616 5431 . - . ID=gene-CYJ01_RS06090;Name=CYJ01_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06090;old_locus_tag=CYJ01_06090 NZ_PJUR01000012.1 Protein Homology CDS 4616 5431 . - 0 ID=cds-WP_101431213.1;Parent=gene-CYJ01_RS06090;Dbxref=GenBank:WP_101431213.1;Name=WP_101431213.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168536.1;locus_tag=CYJ01_RS06090;product=ZIP family metal transporter;protein_id=WP_101431213.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 5543 7420 . + . ID=gene-CYJ01_RS06095;Name=CYJ01_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06095;old_locus_tag=CYJ01_06095 NZ_PJUR01000012.1 Protein Homology CDS 5543 7420 . + 0 ID=cds-WP_015728743.1;Parent=gene-CYJ01_RS06095;Dbxref=GenBank:WP_015728743.1;Name=WP_015728743.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=CYJ01_RS06095;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_015728743.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 7430 9211 . + . ID=gene-CYJ01_RS06100;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS06100;old_locus_tag=CYJ01_06100 NZ_PJUR01000012.1 Protein Homology CDS 7430 9211 . + 0 ID=cds-WP_101457366.1;Parent=gene-CYJ01_RS06100;Dbxref=GenBank:WP_101457366.1;Name=WP_101457366.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=CYJ01_RS06100;product=DNA helicase RecQ;protein_id=WP_101457366.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 9450 10409 . + . ID=gene-CYJ01_RS06105;Name=CYJ01_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06105;old_locus_tag=CYJ01_06105 NZ_PJUR01000012.1 Protein Homology CDS 9450 10409 . + 0 ID=cds-WP_101457367.1;Parent=gene-CYJ01_RS06105;Dbxref=GenBank:WP_101457367.1;Name=WP_101457367.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219830.1;locus_tag=CYJ01_RS06105;product=ABC transporter ATP-binding protein;protein_id=WP_101457367.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 10406 11923 . + . ID=gene-CYJ01_RS06110;Name=CYJ01_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06110;old_locus_tag=CYJ01_06110 NZ_PJUR01000012.1 Protein Homology CDS 10406 11923 . + 0 ID=cds-WP_101457368.1;Parent=gene-CYJ01_RS06110;Dbxref=GenBank:WP_101457368.1;Name=WP_101457368.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614537.1;locus_tag=CYJ01_RS06110;product=ABC transporter permease/substrate-binding protein;protein_id=WP_101457368.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 12248 13297 . + . ID=gene-CYJ01_RS06115;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CYJ01_RS06115;old_locus_tag=CYJ01_06115 NZ_PJUR01000012.1 Protein Homology CDS 12248 13297 . + 0 ID=cds-WP_063279021.1;Parent=gene-CYJ01_RS06115;Dbxref=GenBank:WP_063279021.1;Name=WP_063279021.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=CYJ01_RS06115;product=histidinol-phosphate transaminase;protein_id=WP_063279021.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 13398 13934 . + . ID=gene-CYJ01_RS06120;Name=CYJ01_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06120;old_locus_tag=CYJ01_06120 NZ_PJUR01000012.1 Protein Homology CDS 13398 13934 . + 0 ID=cds-WP_014614535.1;Parent=gene-CYJ01_RS06120;Dbxref=GenBank:WP_014614535.1;Name=WP_014614535.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168530.1;locus_tag=CYJ01_RS06120;product=5' nucleotidase%2C NT5C type;protein_id=WP_014614535.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 14020 14952 . - . ID=gene-CYJ01_RS06125;Name=CYJ01_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06125;old_locus_tag=CYJ01_06125 NZ_PJUR01000012.1 Protein Homology CDS 14020 14952 . - 0 ID=cds-WP_014614534.1;Parent=gene-CYJ01_RS06125;Dbxref=GenBank:WP_014614534.1;Name=WP_014614534.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=CYJ01_RS06125;product=diacylglycerol/lipid kinase family protein;protein_id=WP_014614534.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 15087 16589 . - . ID=gene-CYJ01_RS06130;Name=CYJ01_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06130;old_locus_tag=CYJ01_06130 NZ_PJUR01000012.1 Protein Homology CDS 15087 16589 . - 0 ID=cds-WP_014614533.1;Parent=gene-CYJ01_RS06130;Dbxref=GenBank:WP_014614533.1;Name=WP_014614533.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614533.1;locus_tag=CYJ01_RS06130;product=peptide MFS transporter;protein_id=WP_014614533.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 16940 18445 . - . ID=gene-CYJ01_RS06135;Name=CYJ01_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06135;old_locus_tag=CYJ01_06135 NZ_PJUR01000012.1 Protein Homology CDS 16940 18445 . - 0 ID=cds-WP_014614532.1;Parent=gene-CYJ01_RS06135;Dbxref=GenBank:WP_014614532.1;Name=WP_014614532.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=CYJ01_RS06135;product=peptide MFS transporter;protein_id=WP_014614532.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 18919 20172 . + . ID=gene-CYJ01_RS06140;Name=CYJ01_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06140;old_locus_tag=CYJ01_06140 NZ_PJUR01000012.1 Protein Homology CDS 18919 20172 . + 0 ID=cds-WP_157929452.1;Parent=gene-CYJ01_RS06140;Dbxref=GenBank:WP_157929452.1;Name=WP_157929452.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ01_RS06140;product=MFS transporter;protein_id=WP_157929452.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 20160 20654 . + . ID=gene-CYJ01_RS06145;Name=CYJ01_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06145;old_locus_tag=CYJ01_06145 NZ_PJUR01000012.1 Protein Homology CDS 20160 20654 . + 0 ID=cds-WP_101457370.1;Parent=gene-CYJ01_RS06145;Dbxref=GenBank:WP_101457370.1;Name=WP_101457370.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=CYJ01_RS06145;product=GNAT family N-acetyltransferase;protein_id=WP_101457370.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 20976 21476 . - . ID=gene-CYJ01_RS06150;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CYJ01_RS06150;old_locus_tag=CYJ01_06150 NZ_PJUR01000012.1 Protein Homology CDS 20976 21476 . - 0 ID=cds-WP_015728751.1;Parent=gene-CYJ01_RS06150;Dbxref=GenBank:WP_015728751.1;Name=WP_015728751.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CYJ01_RS06150;product=preQ(1) synthase;protein_id=WP_015728751.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 21496 22377 . - . ID=gene-CYJ01_RS06155;Name=CYJ01_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06155;old_locus_tag=CYJ01_06155 NZ_PJUR01000012.1 Protein Homology CDS 21496 22377 . - 0 ID=cds-WP_014614525.1;Parent=gene-CYJ01_RS06155;Dbxref=GenBank:WP_014614525.1;Name=WP_014614525.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614525.1;locus_tag=CYJ01_RS06155;product=DMT family transporter;protein_id=WP_014614525.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 23002 23400 . + . ID=gene-CYJ01_RS06160;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CYJ01_RS06160;old_locus_tag=CYJ01_06160 NZ_PJUR01000012.1 Protein Homology CDS 23002 23400 . + 0 ID=cds-WP_014614524.1;Parent=gene-CYJ01_RS06160;Dbxref=GenBank:WP_014614524.1;Name=WP_014614524.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CYJ01_RS06160;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_014614524.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 23363 25468 . + . ID=gene-CYJ01_RS06165;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CYJ01_RS06165;old_locus_tag=CYJ01_06165 NZ_PJUR01000012.1 Protein Homology CDS 23363 25468 . + 0 ID=cds-WP_014614523.1;Parent=gene-CYJ01_RS06165;Dbxref=GenBank:WP_014614523.1;Name=WP_014614523.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=CYJ01_RS06165;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014614523.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 25696 26658 . + . ID=gene-CYJ01_RS06170;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CYJ01_RS06170;old_locus_tag=CYJ01_06170 NZ_PJUR01000012.1 Protein Homology CDS 25696 26658 . + 0 ID=cds-WP_014614522.1;Parent=gene-CYJ01_RS06170;Dbxref=GenBank:WP_014614522.1;Name=WP_014614522.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166133.1;locus_tag=CYJ01_RS06170;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_014614522.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 27039 27353 . - . ID=gene-CYJ01_RS06180;Name=CYJ01_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06180;old_locus_tag=CYJ01_06180 NZ_PJUR01000012.1 Protein Homology CDS 27039 27353 . - 0 ID=cds-WP_014614521.1;Parent=gene-CYJ01_RS06180;Dbxref=GenBank:WP_014614521.1;Name=WP_014614521.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614521.1;locus_tag=CYJ01_RS06180;product=CHY zinc finger protein;protein_id=WP_014614521.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 27378 28307 . - . ID=gene-CYJ01_RS06185;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06185;old_locus_tag=CYJ01_06185 NZ_PJUR01000012.1 Protein Homology CDS 27378 28307 . - 0 ID=cds-WP_199799291.1;Parent=gene-CYJ01_RS06185;Dbxref=GenBank:WP_199799291.1;Name=WP_199799291.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219843.1;locus_tag=CYJ01_RS06185;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_199799291.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 28452 28970 . - . ID=gene-CYJ01_RS06190;Name=CYJ01_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06190;old_locus_tag=CYJ01_06190 NZ_PJUR01000012.1 Protein Homology CDS 28452 28970 . - 0 ID=cds-WP_101457372.1;Parent=gene-CYJ01_RS06190;Dbxref=GenBank:WP_101457372.1;Name=WP_101457372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168519.1;locus_tag=CYJ01_RS06190;product=GrpB family protein;protein_id=WP_101457372.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 29081 29974 . + . ID=gene-CYJ01_RS06195;Name=CYJ01_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06195;old_locus_tag=CYJ01_06195 NZ_PJUR01000012.1 Protein Homology CDS 29081 29974 . + 0 ID=cds-WP_101457373.1;Parent=gene-CYJ01_RS06195;Dbxref=GenBank:WP_101457373.1;Name=WP_101457373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614518.1;locus_tag=CYJ01_RS06195;product=EMYY motif lipoprotein;protein_id=WP_101457373.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 30139 30459 . + . ID=gene-CYJ01_RS06200;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS06200;old_locus_tag=CYJ01_06200 NZ_PJUR01000012.1 Protein Homology CDS 30139 30459 . + 0 ID=cds-WP_096548096.1;Parent=gene-CYJ01_RS06200;Dbxref=GenBank:WP_096548096.1;Name=WP_096548096.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=CYJ01_RS06200;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_096548096.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 30814 31929 . + . ID=gene-CYJ01_RS06205;Name=CYJ01_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06205;old_locus_tag=CYJ01_06205 NZ_PJUR01000012.1 Protein Homology CDS 30814 31929 . + 0 ID=cds-WP_101457374.1;Parent=gene-CYJ01_RS06205;Dbxref=GenBank:WP_101457374.1;Name=WP_101457374.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166128.1;locus_tag=CYJ01_RS06205;product=glycerate kinase;protein_id=WP_101457374.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 32082 33305 . - . ID=gene-CYJ01_RS06210;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CYJ01_RS06210;old_locus_tag=CYJ01_06210 NZ_PJUR01000012.1 Protein Homology CDS 32082 33305 . - 0 ID=cds-WP_015728755.1;Parent=gene-CYJ01_RS06210;Dbxref=GenBank:WP_015728755.1;Name=WP_015728755.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166127.1;locus_tag=CYJ01_RS06210;product=peptidase T;protein_id=WP_015728755.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 33329 33832 . - . ID=gene-CYJ01_RS06215;Name=CYJ01_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06215;old_locus_tag=CYJ01_06215 NZ_PJUR01000012.1 Protein Homology CDS 33329 33832 . - 0 ID=cds-WP_014614514.1;Parent=gene-CYJ01_RS06215;Dbxref=GenBank:WP_014614514.1;Name=WP_014614514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=CYJ01_RS06215;product=threonine/serine exporter family protein;protein_id=WP_014614514.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 33848 34609 . - . ID=gene-CYJ01_RS06220;Name=CYJ01_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06220;old_locus_tag=CYJ01_06220 NZ_PJUR01000012.1 Protein Homology CDS 33848 34609 . - 0 ID=cds-WP_014614513.1;Parent=gene-CYJ01_RS06220;Dbxref=GenBank:WP_014614513.1;Name=WP_014614513.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=CYJ01_RS06220;product=threonine/serine exporter family protein;protein_id=WP_014614513.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 35103 36173 . - . ID=gene-CYJ01_RS06225;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=CYJ01_RS06225;old_locus_tag=CYJ01_06225 NZ_PJUR01000012.1 Protein Homology CDS 35103 36173 . - 0 ID=cds-WP_014614512.1;Parent=gene-CYJ01_RS06225;Dbxref=GenBank:WP_014614512.1;Name=WP_014614512.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614512.1;locus_tag=CYJ01_RS06225;product=GGDEF domain-containing protein GdpS;protein_id=WP_014614512.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 36603 37661 . + . ID=gene-CYJ01_RS06230;Name=CYJ01_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06230;old_locus_tag=CYJ01_06230 NZ_PJUR01000012.1 Protein Homology CDS 36603 37661 . + 0 ID=cds-WP_014614511.1;Parent=gene-CYJ01_RS06230;Dbxref=GenBank:WP_014614511.1;Name=WP_014614511.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614511.1;locus_tag=CYJ01_RS06230;product=glycosyltransferase family 4 protein;protein_id=WP_014614511.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 37818 38453 . - . ID=gene-CYJ01_RS06235;Name=CYJ01_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06235;old_locus_tag=CYJ01_06235 NZ_PJUR01000012.1 Protein Homology CDS 37818 38453 . - 0 ID=cds-WP_014614510.1;Parent=gene-CYJ01_RS06235;Dbxref=GenBank:WP_014614510.1;Name=WP_014614510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424513.1;locus_tag=CYJ01_RS06235;product=YigZ family protein;protein_id=WP_014614510.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 38751 39635 . + . ID=gene-CYJ01_RS06240;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=CYJ01_RS06240;old_locus_tag=CYJ01_06240 NZ_PJUR01000012.1 Protein Homology CDS 38751 39635 . + 0 ID=cds-WP_031253649.1;Parent=gene-CYJ01_RS06240;Dbxref=GenBank:WP_031253649.1;Name=WP_031253649.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=CYJ01_RS06240;product=fatty acid kinase binding subunit FakB1;protein_id=WP_031253649.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 39790 41076 . + . ID=gene-CYJ01_RS06245;Name=CYJ01_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06245;old_locus_tag=CYJ01_06245 NZ_PJUR01000012.1 Protein Homology CDS 39790 41076 . + 0 ID=cds-WP_015728758.1;Parent=gene-CYJ01_RS06245;Dbxref=GenBank:WP_015728758.1;Name=WP_015728758.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166120.1;locus_tag=CYJ01_RS06245;product=DEAD/DEAH box helicase family protein;protein_id=WP_015728758.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 41325 41741 . + . ID=gene-CYJ01_RS12260;Name=CYJ01_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12260 NZ_PJUR01000012.1 GeneMarkS-2+ CDS 41325 41741 . + 0 ID=cds-WP_225549922.1;Parent=gene-CYJ01_RS12260;Dbxref=GenBank:WP_225549922.1;Name=WP_225549922.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12260;product=ComF family protein;protein_id=WP_225549922.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 41806 42366 . + . ID=gene-CYJ01_RS06255;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CYJ01_RS06255;old_locus_tag=CYJ01_06255 NZ_PJUR01000012.1 Protein Homology CDS 41806 42366 . + 0 ID=cds-WP_014614506.1;Parent=gene-CYJ01_RS06255;Dbxref=GenBank:WP_014614506.1;Name=WP_014614506.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424517.1;locus_tag=CYJ01_RS06255;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_014614506.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 42789 45317 . + . ID=gene-CYJ01_RS06260;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06260;old_locus_tag=CYJ01_06260 NZ_PJUR01000012.1 Protein Homology CDS 42789 45317 . + 0 ID=cds-WP_014614505.1;Parent=gene-CYJ01_RS06260;Dbxref=GenBank:WP_014614505.1;Name=WP_014614505.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168505.1;locus_tag=CYJ01_RS06260;product=preprotein translocase subunit SecA;protein_id=WP_014614505.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 45357 46461 . + . ID=gene-CYJ01_RS06265;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06265;old_locus_tag=CYJ01_06265 NZ_PJUR01000012.1 Protein Homology CDS 45357 45428 . + 0 ID=cds-WP_101457375.1;Parent=gene-CYJ01_RS06265;Dbxref=GenBank:WP_101457375.1;Name=WP_101457375.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ01_RS06265;product=peptide chain release factor 2;protein_id=WP_101457375.1;transl_table=11 NZ_PJUR01000012.1 Protein Homology CDS 45430 46461 . + 0 ID=cds-WP_101457375.1;Parent=gene-CYJ01_RS06265;Dbxref=GenBank:WP_101457375.1;Name=WP_101457375.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ01_RS06265;product=peptide chain release factor 2;protein_id=WP_101457375.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 46669 47310 . + . ID=gene-CYJ01_RS06270;Name=CYJ01_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06270;old_locus_tag=CYJ01_06270 NZ_PJUR01000012.1 Protein Homology CDS 46669 47310 . + 0 ID=cds-WP_014614503.1;Parent=gene-CYJ01_RS06270;Dbxref=GenBank:WP_014614503.1;Name=WP_014614503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=CYJ01_RS06270;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_014614503.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 47316 47561 . + . ID=gene-CYJ01_RS06275;Name=CYJ01_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06275;old_locus_tag=CYJ01_06275 NZ_PJUR01000012.1 Protein Homology CDS 47316 47561 . + 0 ID=cds-WP_031253646.1;Parent=gene-CYJ01_RS06275;Dbxref=GenBank:WP_031253646.1;Name=WP_031253646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=CYJ01_RS06275;product=CsbA family protein;protein_id=WP_031253646.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 47731 49713 . + . ID=gene-CYJ01_RS06280;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06280;old_locus_tag=CYJ01_06280 NZ_PJUR01000012.1 Protein Homology CDS 47731 49713 . + 0 ID=cds-WP_014614501.1;Parent=gene-CYJ01_RS06280;Dbxref=GenBank:WP_014614501.1;Name=WP_014614501.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=CYJ01_RS06280;product=excinuclease ABC subunit UvrB;protein_id=WP_014614501.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 49719 52562 . + . ID=gene-CYJ01_RS06285;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06285;old_locus_tag=CYJ01_06285 NZ_PJUR01000012.1 Protein Homology CDS 49719 52562 . + 0 ID=cds-WP_014614500.1;Parent=gene-CYJ01_RS06285;Dbxref=GenBank:WP_014614500.1;Name=WP_014614500.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168500.1;locus_tag=CYJ01_RS06285;product=excinuclease ABC subunit UvrA;protein_id=WP_014614500.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 52566 52916 . + . ID=gene-CYJ01_RS06290;Name=CYJ01_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06290;old_locus_tag=CYJ01_06290 NZ_PJUR01000012.1 Protein Homology CDS 52566 52916 . + 0 ID=cds-WP_014614499.1;Parent=gene-CYJ01_RS06290;Dbxref=GenBank:WP_014614499.1;Name=WP_014614499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166115.1;locus_tag=CYJ01_RS06290;product=SHOCT-like domain-containing protein;protein_id=WP_014614499.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 53426 54367 . + . ID=gene-CYJ01_RS06295;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=CYJ01_RS06295;old_locus_tag=CYJ01_06295 NZ_PJUR01000012.1 Protein Homology CDS 53426 54367 . + 0 ID=cds-WP_014614498.1;Parent=gene-CYJ01_RS06295;Dbxref=GenBank:WP_014614498.1;Name=WP_014614498.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614498.1;locus_tag=CYJ01_RS06295;product=HPr(Ser) kinase/phosphatase;protein_id=WP_014614498.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 54367 55203 . + . ID=gene-CYJ01_RS06300;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CYJ01_RS06300;old_locus_tag=CYJ01_06300 NZ_PJUR01000012.1 Protein Homology CDS 54367 55203 . + 0 ID=cds-WP_014614497.1;Parent=gene-CYJ01_RS06300;Dbxref=GenBank:WP_014614497.1;Name=WP_014614497.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168497.1;locus_tag=CYJ01_RS06300;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014614497.1;transl_table=11 NZ_PJUR01000012.1 RefSeq pseudogene 55373 55675 . + . ID=gene-CYJ01_RS12495;Name=CYJ01_RS12495;end_range=55675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12495;partial=true;pseudo=true NZ_PJUR01000012.1 Protein Homology CDS 55373 55675 . + 0 ID=cds-CYJ01_RS12495;Parent=gene-CYJ01_RS12495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046677,GO:0016746,GO:0120225;end_range=55675,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=CYJ01_RS12495;partial=true;product=acyltransferase;pseudo=true;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 55710 57149 . + . ID=gene-CYJ01_RS06310;Name=CYJ01_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06310;old_locus_tag=CYJ01_06310 NZ_PJUR01000012.1 Protein Homology CDS 55710 57149 . + 0 ID=cds-WP_015728761.1;Parent=gene-CYJ01_RS06310;Dbxref=GenBank:WP_015728761.1;Name=WP_015728761.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=CYJ01_RS06310;product=tetratricopeptide repeat protein;protein_id=WP_015728761.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 57212 58144 . + . ID=gene-CYJ01_RS06315;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06315;old_locus_tag=CYJ01_06315 NZ_PJUR01000012.1 Protein Homology CDS 57212 58144 . + 0 ID=cds-WP_014614494.1;Parent=gene-CYJ01_RS06315;Dbxref=GenBank:WP_014614494.1;Name=WP_014614494.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614494.1;locus_tag=CYJ01_RS06315;product=thioredoxin-disulfide reductase;protein_id=WP_014614494.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 58750 59658 . + . ID=gene-CYJ01_RS06320;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS06320;old_locus_tag=CYJ01_06320 NZ_PJUR01000012.1 Protein Homology CDS 58750 59658 . + 0 ID=cds-WP_014614493.1;Parent=gene-CYJ01_RS06320;Dbxref=GenBank:WP_014614493.1;Name=WP_014614493.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219570.1;locus_tag=CYJ01_RS06320;product=RNase adapter RapZ;protein_id=WP_014614493.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 59660 60655 . + . ID=gene-CYJ01_RS06325;Name=CYJ01_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06325;old_locus_tag=CYJ01_06325 NZ_PJUR01000012.1 Protein Homology CDS 59660 60655 . + 0 ID=cds-WP_015728762.1;Parent=gene-CYJ01_RS06325;Dbxref=GenBank:WP_015728762.1;Name=WP_015728762.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=CYJ01_RS06325;product=gluconeogenesis factor YvcK family protein;protein_id=WP_015728762.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 60702 61646 . + . ID=gene-CYJ01_RS06330;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06330;old_locus_tag=CYJ01_06330 NZ_PJUR01000012.1 Protein Homology CDS 60702 61646 . + 0 ID=cds-WP_014614491.1;Parent=gene-CYJ01_RS06330;Dbxref=GenBank:WP_014614491.1;Name=WP_014614491.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=CYJ01_RS06330;product=DNA-binding protein WhiA;protein_id=WP_014614491.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 62555 62626 . - . ID=gene-CYJ01_RS06340;Name=CYJ01_RS06340;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS06340;old_locus_tag=CYJ01_06340 NZ_PJUR01000012.1 tRNAscan-SE tRNA 62555 62626 . - . ID=rna-CYJ01_RS06340;Parent=gene-CYJ01_RS06340;anticodon=(pos:complement(62591..62593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS06340;product=tRNA-Arg NZ_PJUR01000012.1 tRNAscan-SE exon 62555 62626 . - . ID=exon-CYJ01_RS06340-1;Parent=rna-CYJ01_RS06340;anticodon=(pos:complement(62591..62593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS06340;product=tRNA-Arg NZ_PJUR01000012.1 RefSeq gene 62751 63365 . + . ID=gene-CYJ01_RS06345;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CYJ01_RS06345;old_locus_tag=CYJ01_06345 NZ_PJUR01000012.1 Protein Homology CDS 62751 63365 . + 0 ID=cds-WP_256726599.1;Parent=gene-CYJ01_RS06345;Dbxref=GenBank:WP_256726599.1;Name=WP_256726599.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614489.1;locus_tag=CYJ01_RS06345;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_256726599.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 63462 63959 . + . ID=gene-CYJ01_RS06350;Name=CYJ01_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06350;old_locus_tag=CYJ01_06350 NZ_PJUR01000012.1 Protein Homology CDS 63462 63959 . + 0 ID=cds-WP_014614488.1;Parent=gene-CYJ01_RS06350;Dbxref=GenBank:WP_014614488.1;Name=WP_014614488.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165690.1;locus_tag=CYJ01_RS06350;product=GNAT family N-acetyltransferase;protein_id=WP_014614488.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 64562 65464 . - . ID=gene-CYJ01_RS06355;Name=CYJ01_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06355;old_locus_tag=CYJ01_06355 NZ_PJUR01000012.1 Protein Homology CDS 64562 65464 . - 0 ID=cds-WP_070407547.1;Parent=gene-CYJ01_RS06355;Dbxref=GenBank:WP_070407547.1;Name=WP_070407547.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816312.1;locus_tag=CYJ01_RS06355;product=TIGR01777 family oxidoreductase;protein_id=WP_070407547.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 66275 66943 . + . ID=gene-CYJ01_RS06360;Name=CYJ01_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06360;old_locus_tag=CYJ01_06360 NZ_PJUR01000012.1 Protein Homology CDS 66275 66943 . + 0 ID=cds-WP_096536132.1;Parent=gene-CYJ01_RS06360;Dbxref=GenBank:WP_096536132.1;Name=WP_096536132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614485.1;locus_tag=CYJ01_RS06360;product=DUF4887 domain-containing protein;protein_id=WP_096536132.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 67042 67272 . - . ID=gene-CYJ01_RS06365;Name=CYJ01_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06365;old_locus_tag=CYJ01_06365 NZ_PJUR01000012.1 Protein Homology CDS 67042 67272 . - 0 ID=cds-WP_081247719.1;Parent=gene-CYJ01_RS06365;Dbxref=GenBank:WP_081247719.1;Name=WP_081247719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168483.1;locus_tag=CYJ01_RS06365;product=hypothetical protein;protein_id=WP_081247719.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 67574 68611 . + . ID=gene-CYJ01_RS06370;Name=CYJ01_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06370;old_locus_tag=CYJ01_06370 NZ_PJUR01000012.1 Protein Homology CDS 67574 68611 . + 0 ID=cds-WP_100002834.1;Parent=gene-CYJ01_RS06370;Dbxref=GenBank:WP_100002834.1;Name=WP_100002834.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614484.1;locus_tag=CYJ01_RS06370;product=sugar-binding transcriptional regulator;protein_id=WP_100002834.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 68674 69681 . + . ID=gene-CYJ01_RS06375;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CYJ01_RS06375;old_locus_tag=CYJ01_06375 NZ_PJUR01000012.1 Protein Homology CDS 68674 69681 . + 0 ID=cds-WP_014614483.1;Parent=gene-CYJ01_RS06375;Dbxref=GenBank:WP_014614483.1;Name=WP_014614483.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=CYJ01_RS06375;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_014614483.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 69813 71003 . + . ID=gene-CYJ01_RS06380;Name=CYJ01_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06380;old_locus_tag=CYJ01_06380 NZ_PJUR01000012.1 Protein Homology CDS 69813 71003 . + 0 ID=cds-WP_014614482.1;Parent=gene-CYJ01_RS06380;Dbxref=GenBank:WP_014614482.1;Name=WP_014614482.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614482.1;locus_tag=CYJ01_RS06380;product=phosphoglycerate kinase;protein_id=WP_014614482.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 71049 71810 . + . ID=gene-CYJ01_RS06385;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06385;old_locus_tag=CYJ01_06385 NZ_PJUR01000012.1 Protein Homology CDS 71049 71810 . + 0 ID=cds-WP_101457376.1;Parent=gene-CYJ01_RS06385;Dbxref=GenBank:WP_101457376.1;Name=WP_101457376.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=CYJ01_RS06385;product=triose-phosphate isomerase;protein_id=WP_101457376.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 71813 73330 . + . ID=gene-CYJ01_RS06390;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=CYJ01_RS06390;old_locus_tag=CYJ01_06390 NZ_PJUR01000012.1 Protein Homology CDS 71813 73330 . + 0 ID=cds-WP_014614480.1;Parent=gene-CYJ01_RS06390;Dbxref=GenBank:WP_014614480.1;Name=WP_014614480.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CYJ01_RS06390;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_014614480.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 73458 74762 . + . ID=gene-CYJ01_RS06395;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CYJ01_RS06395;old_locus_tag=CYJ01_06395 NZ_PJUR01000012.1 Protein Homology CDS 73458 74762 . + 0 ID=cds-WP_014614479.1;Parent=gene-CYJ01_RS06395;Dbxref=GenBank:WP_014614479.1;Name=WP_014614479.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CYJ01_RS06395;product=surface-displayed alpha-enolase;protein_id=WP_014614479.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 74899 75366 . + . ID=gene-CYJ01_RS06400;Name=CYJ01_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06400;old_locus_tag=CYJ01_06400 NZ_PJUR01000012.1 Protein Homology CDS 74899 75366 . + 0 ID=cds-WP_014614478.1;Parent=gene-CYJ01_RS06400;Dbxref=GenBank:WP_014614478.1;Name=WP_014614478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=CYJ01_RS06400;product=hypothetical protein;protein_id=WP_014614478.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 75435 75668 . + . ID=gene-CYJ01_RS06405;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CYJ01_RS06405;old_locus_tag=CYJ01_06405 NZ_PJUR01000012.1 Protein Homology CDS 75435 75668 . + 0 ID=cds-WP_014614477.1;Parent=gene-CYJ01_RS06405;Dbxref=GenBank:WP_014614477.1;Name=WP_014614477.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=CYJ01_RS06405;product=preprotein translocase subunit SecG;protein_id=WP_014614477.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 75767 76507 . + . ID=gene-CYJ01_RS06410;Name=CYJ01_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06410;old_locus_tag=CYJ01_06410 NZ_PJUR01000012.1 Protein Homology CDS 75767 76507 . + 0 ID=cds-WP_014614476.1;Parent=gene-CYJ01_RS06410;Dbxref=GenBank:WP_014614476.1;Name=WP_014614476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=CYJ01_RS06410;product=alpha/beta hydrolase;protein_id=WP_014614476.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 76562 78919 . + . ID=gene-CYJ01_RS06415;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CYJ01_RS06415;old_locus_tag=CYJ01_06415 NZ_PJUR01000012.1 Protein Homology CDS 76562 78919 . + 0 ID=cds-WP_014614475.1;Parent=gene-CYJ01_RS06415;Dbxref=GenBank:WP_014614475.1;Name=WP_014614475.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CYJ01_RS06415;product=ribonuclease R;protein_id=WP_014614475.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 78935 79399 . + . ID=gene-CYJ01_RS06420;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06420;old_locus_tag=CYJ01_06420 NZ_PJUR01000012.1 Protein Homology CDS 78935 79399 . + 0 ID=cds-WP_014614474.1;Parent=gene-CYJ01_RS06420;Dbxref=GenBank:WP_014614474.1;Name=WP_014614474.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=CYJ01_RS06420;product=SsrA-binding protein SmpB;protein_id=WP_014614474.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 79473 79832 . + . ID=gene-CYJ01_RS06425;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CYJ01_RS06425;old_locus_tag=CYJ01_06425 NZ_PJUR01000012.1 cmsearch tmRNA 79473 79832 . + . ID=rna-CYJ01_RS06425;Parent=gene-CYJ01_RS06425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS06425;product=transfer-messenger RNA NZ_PJUR01000012.1 cmsearch exon 79473 79832 . + . ID=exon-CYJ01_RS06425-1;Parent=rna-CYJ01_RS06425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS06425;product=transfer-messenger RNA NZ_PJUR01000012.1 RefSeq gene 80471 80797 . - . ID=gene-CYJ01_RS12265;Name=CYJ01_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12265 NZ_PJUR01000012.1 Protein Homology CDS 80471 80797 . - 0 ID=cds-WP_241900532.1;Parent=gene-CYJ01_RS12265;Dbxref=GenBank:WP_241900532.1;Name=WP_241900532.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014505.7;locus_tag=CYJ01_RS12265;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_241900532.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 80843 81124 . - . ID=gene-CYJ01_RS06435;Name=CYJ01_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06435;old_locus_tag=CYJ01_06435 NZ_PJUR01000012.1 GeneMarkS-2+ CDS 80843 81124 . - 0 ID=cds-WP_133121613.1;Parent=gene-CYJ01_RS06435;Dbxref=GenBank:WP_133121613.1;Name=WP_133121613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS06435;product=hypothetical protein;protein_id=WP_133121613.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 81148 81309 . - . ID=gene-CYJ01_RS12000;Name=CYJ01_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12000 NZ_PJUR01000012.1 GeneMarkS-2+ CDS 81148 81309 . - 0 ID=cds-WP_157929453.1;Parent=gene-CYJ01_RS12000;Dbxref=GenBank:WP_157929453.1;Name=WP_157929453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12000;product=hypothetical protein;protein_id=WP_157929453.1;transl_table=11 NZ_PJUR01000012.1 RefSeq gene 81363 81989 . - . ID=gene-CYJ01_RS06440;Name=CYJ01_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06440;old_locus_tag=CYJ01_06440 NZ_PJUR01000012.1 Protein Homology CDS 81363 81989 . - 0 ID=cds-WP_101457378.1;Parent=gene-CYJ01_RS06440;Dbxref=GenBank:WP_101457378.1;Name=WP_101457378.1;Ontology_term=GO:0006282,GO:0006355,GO:0045892,GO:0003677,GO:0004252;gbkey=CDS;go_function=DNA binding|0003677||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978119.1;locus_tag=CYJ01_RS06440;product=LexA family transcriptional regulator;protein_id=WP_101457378.1;transl_table=11 NZ_PJUR01000012.1 RefSeq pseudogene 82178 82360 . + . ID=gene-CYJ01_RS12500;Name=CYJ01_RS12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12500;old_locus_tag=CYJ01_06445;pseudo=true NZ_PJUR01000012.1 Protein Homology CDS 82178 82360 . + 0 ID=cds-CYJ01_RS12500;Parent=gene-CYJ01_RS12500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480765.1;locus_tag=CYJ01_RS12500;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_PJUR01000012.1 RefSeq pseudogene 82552 82834 . + . ID=gene-CYJ01_RS06450;Name=CYJ01_RS06450;end_range=82834,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS06450;old_locus_tag=CYJ01_06450;partial=true;pseudo=true;start_range=.,82552 NZ_PJUR01000012.1 Protein Homology CDS 82552 82834 . + 0 ID=cds-CYJ01_RS06450;Parent=gene-CYJ01_RS06450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=82834,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS06450;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,82552;transl_table=11 ##sequence-region NZ_PJUR01000013.1 1 84916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000013.1 RefSeq region 1 84916 . + . ID=NZ_PJUR01000013.1:1..84916;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000013.1 RefSeq gene 162 1319 . - . ID=gene-CYJ01_RS06455;Name=CYJ01_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06455;old_locus_tag=CYJ01_06455 NZ_PJUR01000013.1 Protein Homology CDS 162 1319 . - 0 ID=cds-WP_014613633.1;Parent=gene-CYJ01_RS06455;Dbxref=GenBank:WP_014613633.1;Name=WP_014613633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165044.1;locus_tag=CYJ01_RS06455;product=acetoin utilization protein AcuC;protein_id=WP_014613633.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 1333 1965 . - . ID=gene-CYJ01_RS06460;Name=CYJ01_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06460;old_locus_tag=CYJ01_06460 NZ_PJUR01000013.1 Protein Homology CDS 1333 1965 . - 0 ID=cds-WP_015729326.1;Parent=gene-CYJ01_RS06460;Dbxref=GenBank:WP_015729326.1;Name=WP_015729326.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=CYJ01_RS06460;product=GNAT family N-acetyltransferase;protein_id=WP_015729326.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 2132 3841 . + . ID=gene-CYJ01_RS06465;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06465;old_locus_tag=CYJ01_06465 NZ_PJUR01000013.1 Protein Homology CDS 2132 3841 . + 0 ID=cds-WP_014613635.1;Parent=gene-CYJ01_RS06465;Dbxref=GenBank:WP_014613635.1;Name=WP_014613635.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=CYJ01_RS06465;product=acetate--CoA ligase;protein_id=WP_014613635.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 4157 5824 . + . ID=gene-CYJ01_RS06470;Name=CYJ01_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06470;old_locus_tag=CYJ01_06470 NZ_PJUR01000013.1 Protein Homology CDS 4157 5824 . + 0 ID=cds-WP_101457380.1;Parent=gene-CYJ01_RS06470;Dbxref=GenBank:WP_101457380.1;Name=WP_101457380.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CYJ01_RS06470;product=formate--tetrahydrofolate ligase;protein_id=WP_101457380.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 5899 6798 . - . ID=gene-CYJ01_RS06475;Name=CYJ01_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06475;old_locus_tag=CYJ01_06475 NZ_PJUR01000013.1 Protein Homology CDS 5899 6798 . - 0 ID=cds-WP_063284434.1;Parent=gene-CYJ01_RS06475;Dbxref=GenBank:WP_063284434.1;Name=WP_063284434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729323.1;locus_tag=CYJ01_RS06475;product=biosynthetic peptidoglycan transglycosylase;protein_id=WP_063284434.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 7144 8406 . + . ID=gene-CYJ01_RS06480;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CYJ01_RS06480;old_locus_tag=CYJ01_06480 NZ_PJUR01000013.1 Protein Homology CDS 7144 8406 . + 0 ID=cds-WP_020219647.1;Parent=gene-CYJ01_RS06480;Dbxref=GenBank:WP_020219647.1;Name=WP_020219647.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=CYJ01_RS06480;product=tyrosine--tRNA ligase;protein_id=WP_020219647.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 8460 9731 . - . ID=gene-CYJ01_RS06485;Name=CYJ01_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06485;old_locus_tag=CYJ01_06485 NZ_PJUR01000013.1 Protein Homology CDS 8460 9731 . - 0 ID=cds-WP_096536529.1;Parent=gene-CYJ01_RS06485;Dbxref=GenBank:WP_096536529.1;Name=WP_096536529.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219646.1;locus_tag=CYJ01_RS06485;product=S1C family serine protease;protein_id=WP_096536529.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 9886 10503 . + . ID=gene-CYJ01_RS06490;Name=CYJ01_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06490;old_locus_tag=CYJ01_06490 NZ_PJUR01000013.1 Protein Homology CDS 9886 10503 . + 0 ID=cds-WP_014613640.1;Parent=gene-CYJ01_RS06490;Dbxref=GenBank:WP_014613640.1;Name=WP_014613640.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165051.1;locus_tag=CYJ01_RS06490;product=lysophospholipid acyltransferase family protein;protein_id=WP_014613640.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 10711 11835 . + . ID=gene-CYJ01_RS06495;Name=CYJ01_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06495;old_locus_tag=CYJ01_06495 NZ_PJUR01000013.1 Protein Homology CDS 10711 11835 . + 0 ID=cds-WP_101457381.1;Parent=gene-CYJ01_RS06495;Dbxref=GenBank:WP_101457381.1;Name=WP_101457381.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=CYJ01_RS06495;product=HAD family hydrolase;protein_id=WP_101457381.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 11887 13482 . - . ID=gene-CYJ01_RS06500;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06500;old_locus_tag=CYJ01_06500 NZ_PJUR01000013.1 Protein Homology CDS 11887 13482 . - 0 ID=cds-WP_101457382.1;Parent=gene-CYJ01_RS06500;Dbxref=GenBank:WP_101457382.1;Name=WP_101457382.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165053.1;locus_tag=CYJ01_RS06500;product=phosphoglycerate dehydrogenase;protein_id=WP_101457382.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 13472 14632 . - . ID=gene-CYJ01_RS06505;Name=CYJ01_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06505;old_locus_tag=CYJ01_06505 NZ_PJUR01000013.1 Protein Homology CDS 13472 14632 . - 0 ID=cds-WP_101431465.1;Parent=gene-CYJ01_RS06505;Dbxref=GenBank:WP_101431465.1;Name=WP_101431465.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=CYJ01_RS06505;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_101431465.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 14793 15251 . - . ID=gene-CYJ01_RS06510;Name=CYJ01_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06510;old_locus_tag=CYJ01_06510 NZ_PJUR01000013.1 Protein Homology CDS 14793 15251 . - 0 ID=cds-WP_015729320.1;Parent=gene-CYJ01_RS06510;Dbxref=GenBank:WP_015729320.1;Name=WP_015729320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=CYJ01_RS06510;product=SACOL1771 family peroxiredoxin;protein_id=WP_015729320.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 15326 16072 . + . ID=gene-CYJ01_RS06515;Name=CYJ01_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06515;old_locus_tag=CYJ01_06515 NZ_PJUR01000013.1 Protein Homology CDS 15326 16072 . + 0 ID=cds-WP_015729319.1;Parent=gene-CYJ01_RS06515;Dbxref=GenBank:WP_015729319.1;Name=WP_015729319.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613645.1;locus_tag=CYJ01_RS06515;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015729319.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 16122 17075 . - . ID=gene-CYJ01_RS06520;Name=CYJ01_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06520;old_locus_tag=CYJ01_06520 NZ_PJUR01000013.1 Protein Homology CDS 16122 17075 . - 0 ID=cds-WP_015729318.1;Parent=gene-CYJ01_RS06520;Dbxref=GenBank:WP_015729318.1;Name=WP_015729318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219643.1;locus_tag=CYJ01_RS06520;product=ornithine cyclodeaminase family protein;protein_id=WP_015729318.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 17502 17696 . - . ID=gene-CYJ01_RS12505;Name=CYJ01_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12505;old_locus_tag=CYJ01_06525 NZ_PJUR01000013.1 Protein Homology CDS 17502 17696 . - 0 ID=cds-WP_101457383.1;Parent=gene-CYJ01_RS12505;Dbxref=GenBank:WP_101457383.1;Name=WP_101457383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055174.1;locus_tag=CYJ01_RS12505;product=putative immunity/bacteriocin fusion bifunctional protein;protein_id=WP_101457383.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 17909 18112 . + . ID=gene-CYJ01_RS12270;Name=CYJ01_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12270;old_locus_tag=CYJ01_06530 NZ_PJUR01000013.1 Protein Homology CDS 17909 18112 . + 0 ID=cds-WP_065354722.1;Parent=gene-CYJ01_RS12270;Dbxref=GenBank:WP_065354722.1;Name=WP_065354722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613647.1;locus_tag=CYJ01_RS12270;product=hypothetical protein;protein_id=WP_065354722.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 18449 19192 . + . ID=gene-CYJ01_RS06535;Name=CYJ01_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06535;old_locus_tag=CYJ01_06535 NZ_PJUR01000013.1 Protein Homology CDS 18449 19192 . + 0 ID=cds-WP_015729316.1;Parent=gene-CYJ01_RS06535;Dbxref=GenBank:WP_015729316.1;Name=WP_015729316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015598.7;locus_tag=CYJ01_RS06535;product=MAP domain-containing protein;protein_id=WP_015729316.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 19385 19969 . + . ID=gene-CYJ01_RS06540;Name=CYJ01_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06540;old_locus_tag=CYJ01_06540 NZ_PJUR01000013.1 Protein Homology CDS 19385 19969 . + 0 ID=cds-WP_101457384.1;Parent=gene-CYJ01_RS06540;Dbxref=GenBank:WP_101457384.1;Name=WP_101457384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729353.1;locus_tag=CYJ01_RS06540;product=DUF4355 domain-containing protein;protein_id=WP_101457384.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 20028 21008 . - . ID=gene-CYJ01_RS06545;Name=CYJ01_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06545;old_locus_tag=CYJ01_06545 NZ_PJUR01000013.1 Protein Homology CDS 20028 21008 . - 0 ID=cds-WP_014613567.1;Parent=gene-CYJ01_RS06545;Dbxref=GenBank:WP_014613567.1;Name=WP_014613567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613567.1;locus_tag=CYJ01_RS06545;product=leukocidin/hemolysin toxin family protein;protein_id=WP_014613567.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 21010 21942 . - . ID=gene-CYJ01_RS06550;Name=CYJ01_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06550;old_locus_tag=CYJ01_06550 NZ_PJUR01000013.1 Protein Homology CDS 21010 21942 . - 0 ID=cds-WP_101431484.1;Parent=gene-CYJ01_RS06550;Dbxref=GenBank:WP_101431484.1;Name=WP_101431484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916699.1;locus_tag=CYJ01_RS06550;product=leukocidin/hemolysin toxin family protein;protein_id=WP_101431484.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 22464 23012 . + . ID=gene-CYJ01_RS06555;Name=CYJ01_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06555;old_locus_tag=CYJ01_06555 NZ_PJUR01000013.1 Protein Homology CDS 22464 23012 . + 0 ID=cds-WP_065354152.1;Parent=gene-CYJ01_RS06555;Dbxref=GenBank:WP_065354152.1;Name=WP_065354152.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613569.1;locus_tag=CYJ01_RS06555;product=histidine phosphatase family protein;protein_id=WP_065354152.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 23154 24224 . + . ID=gene-CYJ01_RS06560;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CYJ01_RS06560;old_locus_tag=CYJ01_06560 NZ_PJUR01000013.1 Protein Homology CDS 23154 24224 . + 0 ID=cds-WP_014613570.1;Parent=gene-CYJ01_RS06560;Dbxref=GenBank:WP_014613570.1;Name=WP_014613570.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613570.1;locus_tag=CYJ01_RS06560;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_014613570.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 24252 25679 . + . ID=gene-CYJ01_RS06565;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ01_RS06565;old_locus_tag=CYJ01_06565 NZ_PJUR01000013.1 Protein Homology CDS 24252 25679 . + 0 ID=cds-WP_014613571.1;Parent=gene-CYJ01_RS06565;Dbxref=GenBank:WP_014613571.1;Name=WP_014613571.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613571.1;locus_tag=CYJ01_RS06565;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014613571.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 25703 25981 . + . ID=gene-CYJ01_RS06570;Name=CYJ01_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06570;old_locus_tag=CYJ01_06570 NZ_PJUR01000013.1 Protein Homology CDS 25703 25981 . + 0 ID=cds-WP_014613572.1;Parent=gene-CYJ01_RS06570;Dbxref=GenBank:WP_014613572.1;Name=WP_014613572.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613572.1;locus_tag=CYJ01_RS06570;product=PTS sugar transporter subunit IIB;protein_id=WP_014613572.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 25994 26461 . + . ID=gene-CYJ01_RS06575;Name=CYJ01_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06575;old_locus_tag=CYJ01_06575 NZ_PJUR01000013.1 Protein Homology CDS 25994 26461 . + 0 ID=cds-WP_014613573.1;Parent=gene-CYJ01_RS06575;Dbxref=GenBank:WP_014613573.1;Name=WP_014613573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165934.1;locus_tag=CYJ01_RS06575;product=PTS sugar transporter subunit IIA;protein_id=WP_014613573.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 26478 27116 . + . ID=gene-CYJ01_RS06580;Name=CYJ01_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06580;old_locus_tag=CYJ01_06580 NZ_PJUR01000013.1 Protein Homology CDS 26478 27116 . + 0 ID=cds-WP_063284452.1;Parent=gene-CYJ01_RS06580;Dbxref=GenBank:WP_063284452.1;Name=WP_063284452.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729352.1;locus_tag=CYJ01_RS06580;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_063284452.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 27116 27979 . + . ID=gene-CYJ01_RS06585;Name=CYJ01_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06585;old_locus_tag=CYJ01_06585 NZ_PJUR01000013.1 Protein Homology CDS 27116 27979 . + 0 ID=cds-WP_015729351.1;Parent=gene-CYJ01_RS06585;Dbxref=GenBank:WP_015729351.1;Name=WP_015729351.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729351.1;locus_tag=CYJ01_RS06585;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_015729351.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 27972 28667 . + . ID=gene-CYJ01_RS06590;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CYJ01_RS06590;old_locus_tag=CYJ01_06590 NZ_PJUR01000013.1 Protein Homology CDS 27972 28667 . + 0 ID=cds-WP_014613576.1;Parent=gene-CYJ01_RS06590;Dbxref=GenBank:WP_014613576.1;Name=WP_014613576.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219668.1;locus_tag=CYJ01_RS06590;product=L-ribulose-5-phosphate 4-epimerase AraD;protein_id=WP_014613576.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 28731 30365 . + . ID=gene-CYJ01_RS06595;Name=CYJ01_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06595;old_locus_tag=CYJ01_06595 NZ_PJUR01000013.1 Protein Homology CDS 28731 30365 . + 0 ID=cds-WP_101431483.1;Parent=gene-CYJ01_RS06595;Dbxref=GenBank:WP_101431483.1;Name=WP_101431483.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165938.1;locus_tag=CYJ01_RS06595;product=BglG family transcription antiterminator;protein_id=WP_101431483.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 30540 31943 . + . ID=gene-CYJ01_RS06600;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CYJ01_RS06600;old_locus_tag=CYJ01_06600 NZ_PJUR01000013.1 Protein Homology CDS 30540 31943 . + 0 ID=cds-WP_014613578.1;Parent=gene-CYJ01_RS06600;Dbxref=GenBank:WP_014613578.1;Name=WP_014613578.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641589.1;locus_tag=CYJ01_RS06600;product=o-succinylbenzoate--CoA ligase;protein_id=WP_014613578.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 31946 32932 . + . ID=gene-CYJ01_RS06605;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CYJ01_RS06605;old_locus_tag=CYJ01_06605 NZ_PJUR01000013.1 Protein Homology CDS 31946 32932 . + 0 ID=cds-WP_014613579.1;Parent=gene-CYJ01_RS06605;Dbxref=GenBank:WP_014613579.1;Name=WP_014613579.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=CYJ01_RS06605;product=o-succinylbenzoate synthase;protein_id=WP_014613579.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 32908 33159 . - . ID=gene-CYJ01_RS06610;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CYJ01_RS06610;old_locus_tag=CYJ01_06610 NZ_PJUR01000013.1 Protein Homology CDS 32908 33159 . - 0 ID=cds-WP_014613580.1;Parent=gene-CYJ01_RS06610;Dbxref=GenBank:WP_014613580.1;Name=WP_014613580.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=CYJ01_RS06610;product=membrane protein insertion efficiency factor YidD;protein_id=WP_014613580.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 33218 33688 . + . ID=gene-CYJ01_RS06615;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CYJ01_RS06615;old_locus_tag=CYJ01_06615 NZ_PJUR01000013.1 Protein Homology CDS 33218 33688 . + 0 ID=cds-WP_014613581.1;Parent=gene-CYJ01_RS06615;Dbxref=GenBank:WP_014613581.1;Name=WP_014613581.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=CYJ01_RS06615;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_014613581.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 33669 34445 . + . ID=gene-CYJ01_RS06620;Name=CYJ01_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06620;old_locus_tag=CYJ01_06620 NZ_PJUR01000013.1 Protein Homology CDS 33669 34445 . + 0 ID=cds-WP_041613219.1;Parent=gene-CYJ01_RS06620;Dbxref=GenBank:WP_041613219.1;Name=WP_041613219.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219665.1;locus_tag=CYJ01_RS06620;product=alpha/beta hydrolase family protein;protein_id=WP_041613219.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 34843 36423 . - . ID=gene-CYJ01_RS06625;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06625;old_locus_tag=CYJ01_06625 NZ_PJUR01000013.1 Protein Homology CDS 34843 36423 . - 0 ID=cds-WP_014613583.1;Parent=gene-CYJ01_RS06625;Dbxref=GenBank:WP_014613583.1;Name=WP_014613583.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=CYJ01_RS06625;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014613583.1;transl_table=11 NZ_PJUR01000013.1 cmsearch riboswitch 36671 36782 . + . ID=id-NZ_PJUR01000013.1:36671..36782;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000013.1 RefSeq gene 36887 38086 . + . ID=gene-CYJ01_RS06630;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CYJ01_RS06630;old_locus_tag=CYJ01_06630 NZ_PJUR01000013.1 Protein Homology CDS 36887 38086 . + 0 ID=cds-WP_014613584.1;Parent=gene-CYJ01_RS06630;Dbxref=GenBank:WP_014613584.1;Name=WP_014613584.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=CYJ01_RS06630;product=methionine adenosyltransferase;protein_id=WP_014613584.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 38174 39085 . + . ID=gene-CYJ01_RS06635;Name=CYJ01_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06635;old_locus_tag=CYJ01_06635 NZ_PJUR01000013.1 Protein Homology CDS 38174 39085 . + 0 ID=cds-WP_014613585.1;Parent=gene-CYJ01_RS06635;Dbxref=GenBank:WP_014613585.1;Name=WP_014613585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219663.1;locus_tag=CYJ01_RS06635;product=NERD domain-containing protein;protein_id=WP_014613585.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 39227 40063 . + . ID=gene-CYJ01_RS06640;Name=CYJ01_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06640;old_locus_tag=CYJ01_06640 NZ_PJUR01000013.1 Protein Homology CDS 39227 40063 . + 0 ID=cds-WP_014613586.1;Parent=gene-CYJ01_RS06640;Dbxref=GenBank:WP_014613586.1;Name=WP_014613586.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=CYJ01_RS06640;product=aldo/keto reductase;protein_id=WP_014613586.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 40165 40512 . - . ID=gene-CYJ01_RS06645;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06645;old_locus_tag=CYJ01_06645 NZ_PJUR01000013.1 Protein Homology CDS 40165 40512 . - 0 ID=cds-WP_014613587.1;Parent=gene-CYJ01_RS06645;Dbxref=GenBank:WP_014613587.1;Name=WP_014613587.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219661.1;locus_tag=CYJ01_RS06645;product=fluoride efflux transporter CrcB;protein_id=WP_014613587.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 40509 40874 . - . ID=gene-CYJ01_RS06650;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06650;old_locus_tag=CYJ01_06650 NZ_PJUR01000013.1 Protein Homology CDS 40509 40874 . - 0 ID=cds-WP_101431481.1;Parent=gene-CYJ01_RS06650;Dbxref=GenBank:WP_101431481.1;Name=WP_101431481.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613588.1;locus_tag=CYJ01_RS06650;product=fluoride efflux transporter CrcB;protein_id=WP_101431481.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 40907 41209 . - . ID=gene-CYJ01_RS06655;Name=CYJ01_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06655;old_locus_tag=CYJ01_06655 NZ_PJUR01000013.1 Protein Homology CDS 40907 41209 . - 0 ID=cds-WP_014613589.1;Parent=gene-CYJ01_RS06655;Dbxref=GenBank:WP_014613589.1;Name=WP_014613589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=CYJ01_RS06655;product=hypothetical protein;protein_id=WP_014613589.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 41362 42072 . + . ID=gene-CYJ01_RS06660;Name=CYJ01_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06660;old_locus_tag=CYJ01_06660 NZ_PJUR01000013.1 Protein Homology CDS 41362 42072 . + 0 ID=cds-WP_014613590.1;Parent=gene-CYJ01_RS06660;Dbxref=GenBank:WP_014613590.1;Name=WP_014613590.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CYJ01_RS06660;product=transaldolase;protein_id=WP_014613590.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 42239 42688 . + . ID=gene-CYJ01_RS06665;Name=CYJ01_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06665;old_locus_tag=CYJ01_06665 NZ_PJUR01000013.1 Protein Homology CDS 42239 42688 . + 0 ID=cds-WP_063278602.1;Parent=gene-CYJ01_RS06665;Dbxref=GenBank:WP_063278602.1;Name=WP_063278602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165953.1;locus_tag=CYJ01_RS06665;product=hypothetical protein;protein_id=WP_063278602.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 42691 43122 . - . ID=gene-CYJ01_RS06670;Name=CYJ01_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06670;old_locus_tag=CYJ01_06670 NZ_PJUR01000013.1 Protein Homology CDS 42691 43122 . - 0 ID=cds-WP_014613592.1;Parent=gene-CYJ01_RS06670;Dbxref=GenBank:WP_014613592.1;Name=WP_014613592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165954.1;locus_tag=CYJ01_RS06670;product=competence protein ComK;protein_id=WP_014613592.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 43125 43679 . - . ID=gene-CYJ01_RS06675;Name=CYJ01_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06675;old_locus_tag=CYJ01_06675 NZ_PJUR01000013.1 Protein Homology CDS 43125 43679 . - 0 ID=cds-WP_172426177.1;Parent=gene-CYJ01_RS06675;Dbxref=GenBank:WP_172426177.1;Name=WP_172426177.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=CYJ01_RS06675;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_172426177.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 43811 44035 . + . ID=gene-CYJ01_RS06680;Name=CYJ01_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06680;old_locus_tag=CYJ01_06680 NZ_PJUR01000013.1 Protein Homology CDS 43811 44035 . + 0 ID=cds-WP_014613594.1;Parent=gene-CYJ01_RS06680;Dbxref=GenBank:WP_014613594.1;Name=WP_014613594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500397.1;locus_tag=CYJ01_RS06680;product=hypothetical protein;protein_id=WP_014613594.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 44192 45055 . + . ID=gene-CYJ01_RS06685;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06685;old_locus_tag=CYJ01_06685 NZ_PJUR01000013.1 Protein Homology CDS 44192 45055 . + 0 ID=cds-WP_014613595.1;Parent=gene-CYJ01_RS06685;Dbxref=GenBank:WP_014613595.1;Name=WP_014613595.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=CYJ01_RS06685;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_014613595.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 45444 46997 . + . ID=gene-CYJ01_RS06690;Name=CYJ01_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06690;old_locus_tag=CYJ01_06690 NZ_PJUR01000013.1 Protein Homology CDS 45444 46997 . + 0 ID=cds-WP_101431479.1;Parent=gene-CYJ01_RS06690;Dbxref=GenBank:WP_101431479.1;Name=WP_101431479.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729344.1;locus_tag=CYJ01_RS06690;product=FAD/NAD(P)-binding protein;protein_id=WP_101431479.1;transl_table=11 NZ_PJUR01000013.1 cmsearch riboswitch 47174 47308 . + . ID=id-NZ_PJUR01000013.1:47174..47308;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000013.1 RefSeq gene 47454 48500 . + . ID=gene-CYJ01_RS06695;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CYJ01_RS06695;old_locus_tag=CYJ01_06695 NZ_PJUR01000013.1 Protein Homology CDS 47454 48500 . + 0 ID=cds-WP_101431478.1;Parent=gene-CYJ01_RS06695;Dbxref=GenBank:WP_101431478.1;Name=WP_101431478.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=CYJ01_RS06695;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_101431478.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 48505 49134 . + . ID=gene-CYJ01_RS06700;Name=CYJ01_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06700;old_locus_tag=CYJ01_06700 NZ_PJUR01000013.1 Protein Homology CDS 48505 49134 . + 0 ID=cds-WP_014613598.1;Parent=gene-CYJ01_RS06700;Dbxref=GenBank:WP_014613598.1;Name=WP_014613598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=CYJ01_RS06700;product=riboflavin synthase;protein_id=WP_014613598.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 49148 50329 . + . ID=gene-CYJ01_RS06705;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06705;old_locus_tag=CYJ01_06705 NZ_PJUR01000013.1 Protein Homology CDS 49148 50329 . + 0 ID=cds-WP_101431477.1;Parent=gene-CYJ01_RS06705;Dbxref=GenBank:WP_101431477.1;Name=WP_101431477.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=CYJ01_RS06705;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_101431477.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 50347 50811 . + . ID=gene-CYJ01_RS06710;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CYJ01_RS06710;old_locus_tag=CYJ01_06710 NZ_PJUR01000013.1 Protein Homology CDS 50347 50811 . + 0 ID=cds-WP_031253731.1;Parent=gene-CYJ01_RS06710;Dbxref=GenBank:WP_031253731.1;Name=WP_031253731.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500388.1;locus_tag=CYJ01_RS06710;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_031253731.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 50936 51922 . - . ID=gene-CYJ01_RS06715;Name=CYJ01_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06715;old_locus_tag=CYJ01_06715 NZ_PJUR01000013.1 Protein Homology CDS 50936 51922 . - 0 ID=cds-WP_101431476.1;Parent=gene-CYJ01_RS06715;Dbxref=GenBank:WP_101431476.1;Name=WP_101431476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613601.1;locus_tag=CYJ01_RS06715;product=proline dehydrogenase family protein;protein_id=WP_101431476.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 52408 52740 . + . ID=gene-CYJ01_RS06720;Name=CYJ01_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06720;old_locus_tag=CYJ01_06720 NZ_PJUR01000013.1 Protein Homology CDS 52408 52740 . + 0 ID=cds-WP_014613603.1;Parent=gene-CYJ01_RS06720;Dbxref=GenBank:WP_014613603.1;Name=WP_014613603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168390.1;locus_tag=CYJ01_RS06720;product=hypothetical protein;protein_id=WP_014613603.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 52883 53707 . + . ID=gene-CYJ01_RS06725;Name=CYJ01_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06725;old_locus_tag=CYJ01_06725 NZ_PJUR01000013.1 Protein Homology CDS 52883 53707 . + 0 ID=cds-WP_101431475.1;Parent=gene-CYJ01_RS06725;Dbxref=GenBank:WP_101431475.1;Name=WP_101431475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=CYJ01_RS06725;product=alpha/beta fold hydrolase;protein_id=WP_101431475.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 53868 54818 . + . ID=gene-CYJ01_RS06730;Name=CYJ01_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06730;old_locus_tag=CYJ01_06730 NZ_PJUR01000013.1 Protein Homology CDS 53868 54818 . + 0 ID=cds-WP_014613605.1;Parent=gene-CYJ01_RS06730;Dbxref=GenBank:WP_014613605.1;Name=WP_014613605.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613605.1;locus_tag=CYJ01_RS06730;product=L-lactate dehydrogenase;protein_id=WP_014613605.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 55128 55538 . + . ID=gene-CYJ01_RS06735;Name=CYJ01_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06735;old_locus_tag=CYJ01_06735 NZ_PJUR01000013.1 Protein Homology CDS 55128 55538 . + 0 ID=cds-WP_014613606.1;Parent=gene-CYJ01_RS06735;Dbxref=GenBank:WP_014613606.1;Name=WP_014613606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613606.1;locus_tag=CYJ01_RS06735;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613606.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 56041 56604 . - . ID=gene-CYJ01_RS06740;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=CYJ01_RS06740;old_locus_tag=CYJ01_06740 NZ_PJUR01000013.1 Protein Homology CDS 56041 56604 . - 0 ID=cds-WP_014613607.1;Parent=gene-CYJ01_RS06740;Dbxref=GenBank:WP_014613607.1;Name=WP_014613607.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=CYJ01_RS06740;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_014613607.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 56601 57554 . - . ID=gene-CYJ01_RS06745;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CYJ01_RS06745;old_locus_tag=CYJ01_06745 NZ_PJUR01000013.1 Protein Homology CDS 56601 57554 . - 0 ID=cds-WP_101431474.1;Parent=gene-CYJ01_RS06745;Dbxref=GenBank:WP_101431474.1;Name=WP_101431474.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613608.1;locus_tag=CYJ01_RS06745;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_101431474.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 57702 58883 . + . ID=gene-CYJ01_RS06750;Name=CYJ01_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06750;old_locus_tag=CYJ01_06750 NZ_PJUR01000013.1 Protein Homology CDS 57702 58883 . + 0 ID=cds-WP_015729341.1;Parent=gene-CYJ01_RS06750;Dbxref=GenBank:WP_015729341.1;Name=WP_015729341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729341.1;locus_tag=CYJ01_RS06750;product=MDR family MFS transporter;protein_id=WP_015729341.1;transl_table=11 NZ_PJUR01000013.1 cmsearch binding_site 58953 59144 . + . ID=id-NZ_PJUR01000013.1:58953..59144;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000013.1 RefSeq gene 59192 61606 . + . ID=gene-CYJ01_RS06755;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CYJ01_RS06755;old_locus_tag=CYJ01_06755 NZ_PJUR01000013.1 Protein Homology CDS 59192 61606 . + 0 ID=cds-WP_096533595.1;Parent=gene-CYJ01_RS06755;Dbxref=GenBank:WP_096533595.1;Name=WP_096533595.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=CYJ01_RS06755;product=leucine--tRNA ligase;protein_id=WP_096533595.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 61633 61944 . + . ID=gene-CYJ01_RS06760;Name=CYJ01_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06760;old_locus_tag=CYJ01_06760 NZ_PJUR01000013.1 Protein Homology CDS 61633 61944 . + 0 ID=cds-WP_014613611.1;Parent=gene-CYJ01_RS06760;Dbxref=GenBank:WP_014613611.1;Name=WP_014613611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187674.1;locus_tag=CYJ01_RS06760;product=rhodanese-like domain-containing protein;protein_id=WP_014613611.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 62536 63792 . - . ID=gene-CYJ01_RS06765;Name=CYJ01_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06765;old_locus_tag=CYJ01_06765 NZ_PJUR01000013.1 Protein Homology CDS 62536 63792 . - 0 ID=cds-WP_063278942.1;Parent=gene-CYJ01_RS06765;Dbxref=GenBank:WP_063278942.1;Name=WP_063278942.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613612.1;locus_tag=CYJ01_RS06765;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063278942.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 63909 65543 . + . ID=gene-CYJ01_RS06770;Name=CYJ01_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06770;old_locus_tag=CYJ01_06770 NZ_PJUR01000013.1 Protein Homology CDS 63909 65543 . + 0 ID=cds-WP_101457385.1;Parent=gene-CYJ01_RS06770;Dbxref=GenBank:WP_101457385.1;Name=WP_101457385.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168401.1;locus_tag=CYJ01_RS06770;product=putative polysaccharide biosynthesis protein;protein_id=WP_101457385.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 65543 66241 . + . ID=gene-CYJ01_RS06775;Name=CYJ01_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06775;old_locus_tag=CYJ01_06775 NZ_PJUR01000013.1 Protein Homology CDS 65543 66241 . + 0 ID=cds-WP_014613614.1;Parent=gene-CYJ01_RS06775;Dbxref=GenBank:WP_014613614.1;Name=WP_014613614.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165027.1;locus_tag=CYJ01_RS06775;product=pseudouridine synthase;protein_id=WP_014613614.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 66325 66723 . + . ID=gene-CYJ01_RS06780;Name=CYJ01_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06780;old_locus_tag=CYJ01_06780 NZ_PJUR01000013.1 Protein Homology CDS 66325 66723 . + 0 ID=cds-WP_014613615.1;Parent=gene-CYJ01_RS06780;Dbxref=GenBank:WP_014613615.1;Name=WP_014613615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168403.1;locus_tag=CYJ01_RS06780;product=YtxH domain-containing protein;protein_id=WP_014613615.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 67046 68455 . + . ID=gene-CYJ01_RS06785;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=CYJ01_RS06785;old_locus_tag=CYJ01_06785 NZ_PJUR01000013.1 Protein Homology CDS 67046 68455 . + 0 ID=cds-WP_014613617.1;Parent=gene-CYJ01_RS06785;Dbxref=GenBank:WP_014613617.1;Name=WP_014613617.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=CYJ01_RS06785;product=dipeptidase PepV;protein_id=WP_014613617.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 68459 69307 . + . ID=gene-CYJ01_RS06790;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CYJ01_RS06790;old_locus_tag=CYJ01_06790 NZ_PJUR01000013.1 Protein Homology CDS 68459 69307 . + 0 ID=cds-WP_014613618.1;Parent=gene-CYJ01_RS06790;Dbxref=GenBank:WP_014613618.1;Name=WP_014613618.1;Ontology_term=GO:0042853,GO:0046416,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA,D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613618.1;locus_tag=CYJ01_RS06790;product=D-amino-acid transaminase;protein_id=WP_014613618.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 69540 70331 . + . ID=gene-CYJ01_RS06795;Name=CYJ01_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06795;old_locus_tag=CYJ01_06795 NZ_PJUR01000013.1 Protein Homology CDS 69540 70331 . + 0 ID=cds-WP_014613619.1;Parent=gene-CYJ01_RS06795;Dbxref=GenBank:WP_014613619.1;Name=WP_014613619.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=CYJ01_RS06795;product=phosphotransferase family protein;protein_id=WP_014613619.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 70347 71000 . + . ID=gene-CYJ01_RS06800;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06800;old_locus_tag=CYJ01_06800 NZ_PJUR01000013.1 Protein Homology CDS 70347 71000 . + 0 ID=cds-WP_015729335.1;Parent=gene-CYJ01_RS06800;Dbxref=GenBank:WP_015729335.1;Name=WP_015729335.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729335.1;locus_tag=CYJ01_RS06800;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_015729335.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 71272 72105 . + . ID=gene-CYJ01_RS06805;Name=CYJ01_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06805;old_locus_tag=CYJ01_06805 NZ_PJUR01000013.1 Protein Homology CDS 71272 72105 . + 0 ID=cds-WP_101457386.1;Parent=gene-CYJ01_RS06805;Dbxref=GenBank:WP_101457386.1;Name=WP_101457386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613621.1;locus_tag=CYJ01_RS06805;product=YtnP family quorum-quenching lactonase;protein_id=WP_101457386.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 72172 72489 . - . ID=gene-CYJ01_RS06810;Name=CYJ01_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06810;old_locus_tag=CYJ01_06810 NZ_PJUR01000013.1 Protein Homology CDS 72172 72489 . - 0 ID=cds-WP_014613622.1;Parent=gene-CYJ01_RS06810;Dbxref=GenBank:WP_014613622.1;Name=WP_014613622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=CYJ01_RS06810;product=hypothetical protein;protein_id=WP_014613622.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 72585 73652 . + . ID=gene-CYJ01_RS06815;Name=CYJ01_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06815;old_locus_tag=CYJ01_06815 NZ_PJUR01000013.1 Protein Homology CDS 72585 73652 . + 0 ID=cds-WP_070407624.1;Parent=gene-CYJ01_RS06815;Dbxref=GenBank:WP_070407624.1;Name=WP_070407624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613623.1;locus_tag=CYJ01_RS06815;product=M42 family metallopeptidase;protein_id=WP_070407624.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 73664 73972 . + . ID=gene-CYJ01_RS06820;Name=CYJ01_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06820;old_locus_tag=CYJ01_06820 NZ_PJUR01000013.1 Protein Homology CDS 73664 73972 . + 0 ID=cds-WP_101457387.1;Parent=gene-CYJ01_RS06820;Dbxref=GenBank:WP_101457387.1;Name=WP_101457387.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168411.1;locus_tag=CYJ01_RS06820;product=thioredoxin family protein;protein_id=WP_101457387.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 74065 74931 . + . ID=gene-CYJ01_RS06825;Name=CYJ01_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06825;old_locus_tag=CYJ01_06825 NZ_PJUR01000013.1 Protein Homology CDS 74065 74931 . + 0 ID=cds-WP_014613625.1;Parent=gene-CYJ01_RS06825;Dbxref=GenBank:WP_014613625.1;Name=WP_014613625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=CYJ01_RS06825;product=DUF1444 domain-containing protein;protein_id=WP_014613625.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 74937 75536 . + . ID=gene-CYJ01_RS06830;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=CYJ01_RS06830;old_locus_tag=CYJ01_06830 NZ_PJUR01000013.1 Protein Homology CDS 74937 75536 . + 0 ID=cds-WP_014613626.1;Parent=gene-CYJ01_RS06830;Dbxref=GenBank:WP_014613626.1;Name=WP_014613626.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=CYJ01_RS06830;product=YtpR family tRNA-binding protein;protein_id=WP_014613626.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 75556 78798 . + . ID=gene-CYJ01_RS06835;Name=CYJ01_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06835;old_locus_tag=CYJ01_06835 NZ_PJUR01000013.1 Protein Homology CDS 75556 78798 . + 0 ID=cds-WP_101457388.1;Parent=gene-CYJ01_RS06835;Dbxref=GenBank:WP_101457388.1;Name=WP_101457388.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=CYJ01_RS06835;product=DNA translocase FtsK;protein_id=WP_101457388.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 78827 80140 . + . ID=gene-CYJ01_RS06840;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CYJ01_RS06840;old_locus_tag=CYJ01_06840 NZ_PJUR01000013.1 Protein Homology CDS 78827 80140 . + 0 ID=cds-WP_014613628.1;Parent=gene-CYJ01_RS06840;Dbxref=GenBank:WP_014613628.1;Name=WP_014613628.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484970.1;locus_tag=CYJ01_RS06840;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014613628.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 80219 80827 . + . ID=gene-CYJ01_RS06845;Name=CYJ01_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06845;old_locus_tag=CYJ01_06845 NZ_PJUR01000013.1 Protein Homology CDS 80219 80827 . + 0 ID=cds-WP_014613629.1;Parent=gene-CYJ01_RS06845;Dbxref=GenBank:WP_014613629.1;Name=WP_014613629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434851.1;locus_tag=CYJ01_RS06845;product=DUF948 domain-containing protein;protein_id=WP_014613629.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 80923 82020 . + . ID=gene-CYJ01_RS06850;Name=CYJ01_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06850;old_locus_tag=CYJ01_06850 NZ_PJUR01000013.1 Protein Homology CDS 80923 82020 . + 0 ID=cds-WP_100040088.1;Parent=gene-CYJ01_RS06850;Dbxref=GenBank:WP_100040088.1;Name=WP_100040088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729328.1;locus_tag=CYJ01_RS06850;product=hypothetical protein;protein_id=WP_100040088.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 82340 83431 . + . ID=gene-CYJ01_RS06855;Name=CYJ01_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06855;old_locus_tag=CYJ01_06855 NZ_PJUR01000013.1 Protein Homology CDS 82340 83431 . + 0 ID=cds-WP_014613631.1;Parent=gene-CYJ01_RS06855;Dbxref=GenBank:WP_014613631.1;Name=WP_014613631.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=CYJ01_RS06855;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_014613631.1;transl_table=11 NZ_PJUR01000013.1 RefSeq gene 83838 84827 . + . ID=gene-CYJ01_RS06860;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06860;old_locus_tag=CYJ01_06860 NZ_PJUR01000013.1 Protein Homology CDS 83838 84827 . + 0 ID=cds-WP_014613632.1;Parent=gene-CYJ01_RS06860;Dbxref=GenBank:WP_014613632.1;Name=WP_014613632.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503626.1;locus_tag=CYJ01_RS06860;product=catabolite control protein A;protein_id=WP_014613632.1;transl_table=11 ##sequence-region NZ_PJUR01000014.1 1 54728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000014.1 RefSeq region 1 54728 . + . ID=NZ_PJUR01000014.1:1..54728;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000014.1 RefSeq gene 437 952 . - . ID=gene-CYJ01_RS06865;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06865;old_locus_tag=CYJ01_06865 NZ_PJUR01000014.1 Protein Homology CDS 437 952 . - 0 ID=cds-WP_101457389.1;Parent=gene-CYJ01_RS06865;Dbxref=GenBank:WP_101457389.1;Name=WP_101457389.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=CYJ01_RS06865;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_101457389.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 1257 1532 . + . ID=gene-CYJ01_RS06870;Name=CYJ01_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06870;old_locus_tag=CYJ01_06870 NZ_PJUR01000014.1 Protein Homology CDS 1257 1532 . + 0 ID=cds-WP_015728571.1;Parent=gene-CYJ01_RS06870;Dbxref=GenBank:WP_015728571.1;Name=WP_015728571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728571.1;locus_tag=CYJ01_RS06870;product=hypothetical protein;protein_id=WP_015728571.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 1913 2920 . - . ID=gene-CYJ01_RS06875;Name=CYJ01_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06875;old_locus_tag=CYJ01_06875 NZ_PJUR01000014.1 Protein Homology CDS 1913 2920 . - 0 ID=cds-WP_014614841.1;Parent=gene-CYJ01_RS06875;Dbxref=GenBank:WP_014614841.1;Name=WP_014614841.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498204.1;locus_tag=CYJ01_RS06875;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614841.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 3258 3539 . - . ID=gene-CYJ01_RS06880;Name=CYJ01_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06880;old_locus_tag=CYJ01_06880 NZ_PJUR01000014.1 Protein Homology CDS 3258 3539 . - 0 ID=cds-WP_240621151.1;Parent=gene-CYJ01_RS06880;Dbxref=GenBank:WP_240621151.1;Name=WP_240621151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166378.1;locus_tag=CYJ01_RS06880;product=hypothetical protein;protein_id=WP_240621151.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 4060 5202 . - . ID=gene-CYJ01_RS06885;Name=CYJ01_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06885;old_locus_tag=CYJ01_06885 NZ_PJUR01000014.1 Protein Homology CDS 4060 5202 . - 0 ID=cds-WP_014614844.1;Parent=gene-CYJ01_RS06885;Dbxref=GenBank:WP_014614844.1;Name=WP_014614844.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036666.1;locus_tag=CYJ01_RS06885;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_014614844.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 5195 6100 . - . ID=gene-CYJ01_RS06890;Name=CYJ01_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06890;old_locus_tag=CYJ01_06890 NZ_PJUR01000014.1 Protein Homology CDS 5195 6100 . - 0 ID=cds-WP_014614845.1;Parent=gene-CYJ01_RS06890;Dbxref=GenBank:WP_014614845.1;Name=WP_014614845.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=CYJ01_RS06890;product=PLP-dependent cysteine synthase family protein;protein_id=WP_014614845.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 6383 7708 . + . ID=gene-CYJ01_RS06895;Name=CYJ01_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06895;old_locus_tag=CYJ01_06895 NZ_PJUR01000014.1 Protein Homology CDS 6383 7708 . + 0 ID=cds-WP_014614846.1;Parent=gene-CYJ01_RS06895;Dbxref=GenBank:WP_014614846.1;Name=WP_014614846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166897.1;locus_tag=CYJ01_RS06895;product=carboxylesterase family protein;protein_id=WP_014614846.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 7858 9186 . - . ID=gene-CYJ01_RS06900;Name=CYJ01_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06900;old_locus_tag=CYJ01_06900 NZ_PJUR01000014.1 Protein Homology CDS 7858 9186 . - 0 ID=cds-WP_014614848.1;Parent=gene-CYJ01_RS06900;Dbxref=GenBank:WP_014614848.1;Name=WP_014614848.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169210.1;locus_tag=CYJ01_RS06900;product=sodium-dependent transporter;protein_id=WP_014614848.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 9370 9558 . + . ID=gene-CYJ01_RS06905;Name=CYJ01_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06905;old_locus_tag=CYJ01_06905 NZ_PJUR01000014.1 Protein Homology CDS 9370 9558 . + 0 ID=cds-WP_014614849.1;Parent=gene-CYJ01_RS06905;Dbxref=GenBank:WP_014614849.1;Name=WP_014614849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614849.1;locus_tag=CYJ01_RS06905;product=hypothetical protein;protein_id=WP_014614849.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 9751 10440 . - . ID=gene-CYJ01_RS06910;Name=CYJ01_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06910;old_locus_tag=CYJ01_06910 NZ_PJUR01000014.1 Protein Homology CDS 9751 10440 . - 0 ID=cds-WP_014614850.1;Parent=gene-CYJ01_RS06910;Dbxref=GenBank:WP_014614850.1;Name=WP_014614850.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166900.1;locus_tag=CYJ01_RS06910;product=response regulator transcription factor;protein_id=WP_014614850.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 10454 13087 . - . ID=gene-CYJ01_RS06915;Name=CYJ01_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06915;old_locus_tag=CYJ01_06915 NZ_PJUR01000014.1 Protein Homology CDS 10454 13087 . - 0 ID=cds-WP_370863489.1;Parent=gene-CYJ01_RS06915;Dbxref=GenBank:WP_370863489.1;Name=WP_370863489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001647432.1;locus_tag=CYJ01_RS06915;product=ATP-binding protein;protein_id=WP_370863489.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 13246 13326 . + . ID=gene-CYJ01_RS12510;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CYJ01_RS12510;old_locus_tag=CYJ01_06920 NZ_PJUR01000014.1 Protein Homology CDS 13246 13326 . + 0 ID=cds-WP_064485063.1;Parent=gene-CYJ01_RS12510;Dbxref=GenBank:WP_064485063.1;Name=WP_064485063.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=CYJ01_RS12510;product=K(+)-transporting ATPase subunit F;protein_id=WP_064485063.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 13352 15028 . + . ID=gene-CYJ01_RS06925;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS06925;old_locus_tag=CYJ01_06925 NZ_PJUR01000014.1 Protein Homology CDS 13352 15028 . + 0 ID=cds-WP_015728565.1;Parent=gene-CYJ01_RS06925;Dbxref=GenBank:WP_015728565.1;Name=WP_015728565.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402656.1;locus_tag=CYJ01_RS06925;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_015728565.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 15044 17068 . + . ID=gene-CYJ01_RS06930;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06930;old_locus_tag=CYJ01_06930 NZ_PJUR01000014.1 Protein Homology CDS 15044 17068 . + 0 ID=cds-WP_101457390.1;Parent=gene-CYJ01_RS06930;Dbxref=GenBank:WP_101457390.1;Name=WP_101457390.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802702.1;locus_tag=CYJ01_RS06930;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_101457390.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 17079 17639 . + . ID=gene-CYJ01_RS06935;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CYJ01_RS06935;old_locus_tag=CYJ01_06935 NZ_PJUR01000014.1 Protein Homology CDS 17079 17639 . + 0 ID=cds-WP_101457391.1;Parent=gene-CYJ01_RS06935;Dbxref=GenBank:WP_101457391.1;Name=WP_101457391.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728563.1;locus_tag=CYJ01_RS06935;product=K(+)-transporting ATPase subunit C;protein_id=WP_101457391.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 17756 18262 . - . ID=gene-CYJ01_RS06940;Name=CYJ01_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06940;old_locus_tag=CYJ01_06940 NZ_PJUR01000014.1 Protein Homology CDS 17756 18262 . - 0 ID=cds-WP_373408312.1;Parent=gene-CYJ01_RS06940;Dbxref=GenBank:WP_373408312.1;Name=WP_373408312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014573.7;locus_tag=CYJ01_RS06940;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_373408312.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 18259 18396 . - . ID=gene-CYJ01_RS12515;Name=CYJ01_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12515 NZ_PJUR01000014.1 GeneMarkS-2+ CDS 18259 18396 . - 0 ID=cds-WP_370498303.1;Parent=gene-CYJ01_RS12515;Dbxref=GenBank:WP_370498303.1;Name=WP_370498303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12515;product=NADPH-dependent FMN reductase family protein;protein_id=WP_370498303.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 18662 19489 . - . ID=gene-CYJ01_RS06945;Name=CYJ01_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06945;old_locus_tag=CYJ01_06945 NZ_PJUR01000014.1 Protein Homology CDS 18662 19489 . - 0 ID=cds-WP_370863475.1;Parent=gene-CYJ01_RS06945;Dbxref=GenBank:WP_370863475.1;Name=WP_370863475.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=CYJ01_RS06945;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_370863475.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 19479 22103 . - . ID=gene-CYJ01_RS06950;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=CYJ01_RS06950;old_locus_tag=CYJ01_06950 NZ_PJUR01000014.1 Protein Homology CDS 19479 22103 . - 0 ID=cds-WP_101457392.1;Parent=gene-CYJ01_RS06950;Dbxref=GenBank:WP_101457392.1;Name=WP_101457392.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728560.1;locus_tag=CYJ01_RS06950;product=pyruvate%2C phosphate dikinase;protein_id=WP_101457392.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 22255 22530 . + . ID=gene-CYJ01_RS12135;Name=CYJ01_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12135;old_locus_tag=CYJ01_06955 NZ_PJUR01000014.1 GeneMarkS-2+ CDS 22255 22530 . + 0 ID=cds-WP_241900534.1;Parent=gene-CYJ01_RS12135;Dbxref=GenBank:WP_241900534.1;Name=WP_241900534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12135;product=hypothetical protein;protein_id=WP_241900534.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 23098 24597 . + . ID=gene-CYJ01_RS06960;Name=CYJ01_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06960;old_locus_tag=CYJ01_06960 NZ_PJUR01000014.1 Protein Homology CDS 23098 24597 . + 0 ID=cds-WP_101457393.1;Parent=gene-CYJ01_RS06960;Dbxref=GenBank:WP_101457393.1;Name=WP_101457393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728558.1;locus_tag=CYJ01_RS06960;product=coagulase domain-containing protein;protein_id=WP_101457393.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 24791 25495 . + . ID=gene-CYJ01_RS06965;Name=CYJ01_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06965;old_locus_tag=CYJ01_06965 NZ_PJUR01000014.1 Protein Homology CDS 24791 25495 . + 0 ID=cds-WP_101457394.1;Parent=gene-CYJ01_RS06965;Dbxref=GenBank:WP_101457394.1;Name=WP_101457394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110168517.1;locus_tag=CYJ01_RS06965;product=exotoxin SpEX;protein_id=WP_101457394.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 25613 25996 . - . ID=gene-CYJ01_RS06970;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CYJ01_RS06970;old_locus_tag=CYJ01_06970 NZ_PJUR01000014.1 Protein Homology CDS 25613 25996 . - 0 ID=cds-WP_014614860.1;Parent=gene-CYJ01_RS06970;Dbxref=GenBank:WP_014614860.1;Name=WP_014614860.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=CYJ01_RS06970;product=aspartate 1-decarboxylase;protein_id=WP_014614860.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 25993 26853 . - . ID=gene-CYJ01_RS06975;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CYJ01_RS06975;old_locus_tag=CYJ01_06975 NZ_PJUR01000014.1 Protein Homology CDS 25993 26853 . - 0 ID=cds-WP_101431630.1;Parent=gene-CYJ01_RS06975;Dbxref=GenBank:WP_101431630.1;Name=WP_101431630.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166913.1;locus_tag=CYJ01_RS06975;product=pantoate--beta-alanine ligase;protein_id=WP_101431630.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 26850 27662 . - . ID=gene-CYJ01_RS06980;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CYJ01_RS06980;old_locus_tag=CYJ01_06980 NZ_PJUR01000014.1 Protein Homology CDS 26850 27662 . - 0 ID=cds-WP_014614862.1;Parent=gene-CYJ01_RS06980;Dbxref=GenBank:WP_014614862.1;Name=WP_014614862.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614862.1;locus_tag=CYJ01_RS06980;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014614862.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 27914 28774 . + . ID=gene-CYJ01_RS06985;Name=CYJ01_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06985;old_locus_tag=CYJ01_06985 NZ_PJUR01000014.1 Protein Homology CDS 27914 28774 . + 0 ID=cds-WP_015728553.1;Parent=gene-CYJ01_RS06985;Dbxref=GenBank:WP_015728553.1;Name=WP_015728553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168625.1;locus_tag=CYJ01_RS06985;product=oxidoreductase;protein_id=WP_015728553.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 28864 30189 . - . ID=gene-CYJ01_RS06990;Name=CYJ01_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06990;old_locus_tag=CYJ01_06990 NZ_PJUR01000014.1 Protein Homology CDS 28864 30189 . - 0 ID=cds-WP_014614864.1;Parent=gene-CYJ01_RS06990;Dbxref=GenBank:WP_014614864.1;Name=WP_014614864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166916.1;locus_tag=CYJ01_RS06990;product=6-phospho-alpha-glucosidase;protein_id=WP_014614864.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 30190 31776 . - . ID=gene-CYJ01_RS06995;Name=CYJ01_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS06995;old_locus_tag=CYJ01_06995 NZ_PJUR01000014.1 Protein Homology CDS 30190 31776 . - 0 ID=cds-WP_101457395.1;Parent=gene-CYJ01_RS06995;Dbxref=GenBank:WP_101457395.1;Name=WP_101457395.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166917.1;locus_tag=CYJ01_RS06995;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_101457395.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 32045 32800 . + . ID=gene-CYJ01_RS07000;Name=CYJ01_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07000;old_locus_tag=CYJ01_07000 NZ_PJUR01000014.1 Protein Homology CDS 32045 32800 . + 0 ID=cds-WP_014614866.1;Parent=gene-CYJ01_RS07000;Dbxref=GenBank:WP_014614866.1;Name=WP_014614866.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614866.1;locus_tag=CYJ01_RS07000;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014614866.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 32926 33486 . - . ID=gene-CYJ01_RS07005;Name=CYJ01_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07005;old_locus_tag=CYJ01_07005 NZ_PJUR01000014.1 Protein Homology CDS 32926 33486 . - 0 ID=cds-WP_101457396.1;Parent=gene-CYJ01_RS07005;Dbxref=GenBank:WP_101457396.1;Name=WP_101457396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728551.1;locus_tag=CYJ01_RS07005;product=hypothetical protein;protein_id=WP_101457396.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 33618 34967 . - . ID=gene-CYJ01_RS07010;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=CYJ01_RS07010;old_locus_tag=CYJ01_07010 NZ_PJUR01000014.1 Protein Homology CDS 33618 34967 . - 0 ID=cds-WP_101457397.1;Parent=gene-CYJ01_RS07010;Dbxref=GenBank:WP_101457397.1;Name=WP_101457397.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728550.1;locus_tag=CYJ01_RS07010;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_101457397.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 34986 36065 . - . ID=gene-CYJ01_RS07015;Name=CYJ01_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07015;old_locus_tag=CYJ01_07015 NZ_PJUR01000014.1 Protein Homology CDS 34986 36065 . - 0 ID=cds-WP_370863476.1;Parent=gene-CYJ01_RS07015;Dbxref=GenBank:WP_370863476.1;Name=WP_370863476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665290.1;locus_tag=CYJ01_RS07015;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_370863476.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 36202 36462 . + . ID=gene-CYJ01_RS07020;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=CYJ01_RS07020;old_locus_tag=CYJ01_07020 NZ_PJUR01000014.1 Protein Homology CDS 36202 36462 . + 0 ID=cds-WP_101457399.1;Parent=gene-CYJ01_RS07020;Dbxref=GenBank:WP_101457399.1;Name=WP_101457399.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=CYJ01_RS07020;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_101457399.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 36462 37211 . + . ID=gene-CYJ01_RS07025;Name=CYJ01_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07025;old_locus_tag=CYJ01_07025 NZ_PJUR01000014.1 Protein Homology CDS 36462 37211 . + 0 ID=cds-WP_070407279.1;Parent=gene-CYJ01_RS07025;Dbxref=GenBank:WP_070407279.1;Name=WP_070407279.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728549.1;locus_tag=CYJ01_RS07025;product=sulfite exporter TauE/SafE family protein;protein_id=WP_070407279.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 37404 38576 . + . ID=gene-CYJ01_RS07030;Name=CYJ01_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07030;old_locus_tag=CYJ01_07030 NZ_PJUR01000014.1 Protein Homology CDS 37404 38576 . + 0 ID=cds-WP_101457400.1;Parent=gene-CYJ01_RS07030;Dbxref=GenBank:WP_101457400.1;Name=WP_101457400.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614872.1;locus_tag=CYJ01_RS07030;product=MFS transporter;protein_id=WP_101457400.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 38820 39248 . + . ID=gene-CYJ01_RS07035;Name=CYJ01_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07035;old_locus_tag=CYJ01_07035 NZ_PJUR01000014.1 Protein Homology CDS 38820 39248 . + 0 ID=cds-WP_070407280.1;Parent=gene-CYJ01_RS07035;Dbxref=GenBank:WP_070407280.1;Name=WP_070407280.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614873.1;locus_tag=CYJ01_RS07035;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_070407280.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 39442 40632 . - . ID=gene-CYJ01_RS07040;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=CYJ01_RS07040;old_locus_tag=CYJ01_07040 NZ_PJUR01000014.1 Protein Homology CDS 39442 40632 . - 0 ID=cds-WP_101457401.1;Parent=gene-CYJ01_RS07040;Dbxref=GenBank:WP_101457401.1;Name=WP_101457401.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614875.1;locus_tag=CYJ01_RS07040;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_101457401.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 40644 41384 . - . ID=gene-CYJ01_RS07045;Name=CYJ01_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07045;old_locus_tag=CYJ01_07045 NZ_PJUR01000014.1 Protein Homology CDS 40644 41384 . - 0 ID=cds-WP_070407281.1;Parent=gene-CYJ01_RS07045;Dbxref=GenBank:WP_070407281.1;Name=WP_070407281.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=CYJ01_RS07045;product=ABC transporter ATP-binding protein;protein_id=WP_070407281.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 41378 42196 . - . ID=gene-CYJ01_RS07050;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=CYJ01_RS07050;old_locus_tag=CYJ01_07050 NZ_PJUR01000014.1 Protein Homology CDS 41378 42196 . - 0 ID=cds-WP_014614877.1;Parent=gene-CYJ01_RS07050;Dbxref=GenBank:WP_014614877.1;Name=WP_014614877.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=CYJ01_RS07050;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_014614877.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 42196 43059 . - . ID=gene-CYJ01_RS07055;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=CYJ01_RS07055;old_locus_tag=CYJ01_07055 NZ_PJUR01000014.1 Protein Homology CDS 42196 43059 . - 0 ID=cds-WP_063284556.1;Parent=gene-CYJ01_RS07055;Dbxref=GenBank:WP_063284556.1;Name=WP_063284556.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614878.1;locus_tag=CYJ01_RS07055;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_063284556.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 43061 43993 . - . ID=gene-CYJ01_RS07060;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=CYJ01_RS07060;old_locus_tag=CYJ01_07060 NZ_PJUR01000014.1 Protein Homology CDS 43061 43993 . - 0 ID=cds-WP_015728548.1;Parent=gene-CYJ01_RS07060;Dbxref=GenBank:WP_015728548.1;Name=WP_015728548.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728548.1;locus_tag=CYJ01_RS07060;product=nickel/cobalt ABC transporter permease;protein_id=WP_015728548.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 44006 45604 . - . ID=gene-CYJ01_RS07065;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07065;old_locus_tag=CYJ01_07065 NZ_PJUR01000014.1 Protein Homology CDS 44006 45604 . - 0 ID=cds-WP_172635606.1;Parent=gene-CYJ01_RS07065;Dbxref=GenBank:WP_172635606.1;Name=WP_172635606.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=CYJ01_RS07065;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_172635606.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 45842 47137 . - . ID=gene-CYJ01_RS07070;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=CYJ01_RS07070;old_locus_tag=CYJ01_07070 NZ_PJUR01000014.1 Protein Homology CDS 45842 47137 . - 0 ID=cds-WP_096536329.1;Parent=gene-CYJ01_RS07070;Dbxref=GenBank:WP_096536329.1;Name=WP_096536329.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614881.1;locus_tag=CYJ01_RS07070;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_096536329.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 47140 47949 . - . ID=gene-CYJ01_RS07075;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=CYJ01_RS07075;old_locus_tag=CYJ01_07075 NZ_PJUR01000014.1 Protein Homology CDS 47140 47949 . - 0 ID=cds-WP_370863218.1;Parent=gene-CYJ01_RS07075;Dbxref=GenBank:WP_370863218.1;Name=WP_370863218.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167820.1;locus_tag=CYJ01_RS07075;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_370863218.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 47968 48777 . - . ID=gene-CYJ01_RS07080;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=CYJ01_RS07080;old_locus_tag=CYJ01_07080 NZ_PJUR01000014.1 Protein Homology CDS 47968 48777 . - 0 ID=cds-WP_101457402.1;Parent=gene-CYJ01_RS07080;Dbxref=GenBank:WP_101457402.1;Name=WP_101457402.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614883.1;locus_tag=CYJ01_RS07080;product=histidine racemase CntK;protein_id=WP_101457402.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 49143 49865 . - . ID=gene-CYJ01_RS07085;Name=CYJ01_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07085;old_locus_tag=CYJ01_07085 NZ_PJUR01000014.1 Protein Homology CDS 49143 49865 . - 0 ID=cds-WP_014614884.1;Parent=gene-CYJ01_RS07085;Dbxref=GenBank:WP_014614884.1;Name=WP_014614884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614884.1;locus_tag=CYJ01_RS07085;product=hypothetical protein;protein_id=WP_014614884.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 50209 50946 . + . ID=gene-CYJ01_RS07090;Name=CYJ01_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07090;old_locus_tag=CYJ01_07090 NZ_PJUR01000014.1 Protein Homology CDS 50209 50946 . + 0 ID=cds-WP_225549879.1;Parent=gene-CYJ01_RS07090;Dbxref=GenBank:WP_225549879.1;Name=WP_225549879.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614885.1;locus_tag=CYJ01_RS07090;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_225549879.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 50952 52337 . + . ID=gene-CYJ01_RS07095;Name=CYJ01_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07095;old_locus_tag=CYJ01_07095 NZ_PJUR01000014.1 Protein Homology CDS 50952 52337 . + 0 ID=cds-WP_014614886.1;Parent=gene-CYJ01_RS07095;Dbxref=GenBank:WP_014614886.1;Name=WP_014614886.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614886.1;locus_tag=CYJ01_RS07095;product=APC family permease;protein_id=WP_014614886.1;transl_table=11 NZ_PJUR01000014.1 RefSeq gene 52581 54635 . - . ID=gene-CYJ01_RS07100;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ01_RS07100;old_locus_tag=CYJ01_07100 NZ_PJUR01000014.1 Protein Homology CDS 52581 54635 . - 0 ID=cds-WP_101457403.1;Parent=gene-CYJ01_RS07100;Dbxref=GenBank:WP_101457403.1;Name=WP_101457403.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614887.1;locus_tag=CYJ01_RS07100;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_101457403.1;transl_table=11 ##sequence-region NZ_PJUR01000015.1 1 52053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000015.1 RefSeq region 1 52053 . + . ID=NZ_PJUR01000015.1:1..52053;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000015.1 RefSeq gene 1 644 . - . ID=gene-CYJ01_RS07105;Name=CYJ01_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07105;old_locus_tag=CYJ01_07105;partial=true;start_range=.,1 NZ_PJUR01000015.1 Protein Homology CDS 1 644 . - 0 ID=cds-WP_198587998.1;Parent=gene-CYJ01_RS07105;Dbxref=GenBank:WP_198587998.1;Name=WP_198587998.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: protein motif:HMM:NF012298.7;locus_tag=CYJ01_RS07105;partial=true;product=protein kinase domain-containing protein;protein_id=WP_198587998.1;start_range=.,1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 684 1226 . - . ID=gene-CYJ01_RS07110;Name=CYJ01_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07110;old_locus_tag=CYJ01_07110 NZ_PJUR01000015.1 GeneMarkS-2+ CDS 684 1226 . - 0 ID=cds-WP_101457404.1;Parent=gene-CYJ01_RS07110;Dbxref=GenBank:WP_101457404.1;Name=WP_101457404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS07110;product=hypothetical protein;protein_id=WP_101457404.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 1229 2830 . - . ID=gene-CYJ01_RS07115;Name=CYJ01_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07115;old_locus_tag=CYJ01_07115 NZ_PJUR01000015.1 Protein Homology CDS 1229 2830 . - 0 ID=cds-WP_101457405.1;Parent=gene-CYJ01_RS07115;Dbxref=GenBank:WP_101457405.1;Name=WP_101457405.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.7;locus_tag=CYJ01_RS07115;product=N-6 DNA methylase;protein_id=WP_101457405.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 3139 3618 . - . ID=gene-CYJ01_RS07120;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CYJ01_RS07120;old_locus_tag=CYJ01_07120 NZ_PJUR01000015.1 Protein Homology CDS 3139 3618 . - 0 ID=cds-WP_101457406.1;Parent=gene-CYJ01_RS07120;Dbxref=GenBank:WP_101457406.1;Name=WP_101457406.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CYJ01_RS07120;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_101457406.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 4332 5114 . - . ID=gene-CYJ01_RS07125;Name=CYJ01_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07125;old_locus_tag=CYJ01_07125 NZ_PJUR01000015.1 Protein Homology CDS 4332 5114 . - 0 ID=cds-WP_037541999.1;Parent=gene-CYJ01_RS07125;Dbxref=GenBank:WP_037541999.1;Name=WP_037541999.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=CYJ01_RS07125;product=MBL fold metallo-hydrolase;protein_id=WP_037541999.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 5137 5916 . - . ID=gene-CYJ01_RS07130;Name=CYJ01_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07130;old_locus_tag=CYJ01_07130 NZ_PJUR01000015.1 Protein Homology CDS 5137 5916 . - 0 ID=cds-WP_014612684.1;Parent=gene-CYJ01_RS07130;Dbxref=GenBank:WP_014612684.1;Name=WP_014612684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=CYJ01_RS07130;product=two-component system regulatory protein YycI;protein_id=WP_014612684.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 5913 7250 . - . ID=gene-CYJ01_RS07135;Name=CYJ01_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07135;old_locus_tag=CYJ01_07135 NZ_PJUR01000015.1 Protein Homology CDS 5913 7250 . - 0 ID=cds-WP_014612683.1;Parent=gene-CYJ01_RS07135;Dbxref=GenBank:WP_014612683.1;Name=WP_014612683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=CYJ01_RS07135;product=YycH family regulatory protein;protein_id=WP_014612683.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 7240 9072 . - . ID=gene-CYJ01_RS07140;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=CYJ01_RS07140;old_locus_tag=CYJ01_07140 NZ_PJUR01000015.1 Protein Homology CDS 7240 9072 . - 0 ID=cds-WP_015729822.1;Parent=gene-CYJ01_RS07140;Dbxref=GenBank:WP_015729822.1;Name=WP_015729822.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612682.1;locus_tag=CYJ01_RS07140;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_015729822.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 9085 9786 . - . ID=gene-CYJ01_RS07145;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=CYJ01_RS07145;old_locus_tag=CYJ01_07145 NZ_PJUR01000015.1 Protein Homology CDS 9085 9786 . - 0 ID=cds-WP_014612681.1;Parent=gene-CYJ01_RS07145;Dbxref=GenBank:WP_014612681.1;Name=WP_014612681.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=CYJ01_RS07145;product=response regulator YycF;protein_id=WP_014612681.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 9937 10275 . - . ID=gene-CYJ01_RS07150;Name=CYJ01_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07150;old_locus_tag=CYJ01_07150 NZ_PJUR01000015.1 Protein Homology CDS 9937 10275 . - 0 ID=cds-WP_015729823.1;Parent=gene-CYJ01_RS07150;Dbxref=GenBank:WP_015729823.1;Name=WP_015729823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729823.1;locus_tag=CYJ01_RS07150;product=SdpI family protein;protein_id=WP_015729823.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 10714 10787 . - . ID=gene-CYJ01_RS07155;Name=CYJ01_RS07155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS07155;old_locus_tag=CYJ01_07155 NZ_PJUR01000015.1 tRNAscan-SE tRNA 10714 10787 . - . ID=rna-CYJ01_RS07155;Parent=gene-CYJ01_RS07155;anticodon=(pos:complement(10751..10753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07155;product=tRNA-Asp NZ_PJUR01000015.1 tRNAscan-SE exon 10714 10787 . - . ID=exon-CYJ01_RS07155-1;Parent=rna-CYJ01_RS07155;anticodon=(pos:complement(10751..10753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07155;product=tRNA-Asp NZ_PJUR01000015.1 RefSeq gene 10799 10872 . - . ID=gene-CYJ01_RS07160;Name=CYJ01_RS07160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS07160;old_locus_tag=CYJ01_07160 NZ_PJUR01000015.1 tRNAscan-SE tRNA 10799 10872 . - . ID=rna-CYJ01_RS07160;Parent=gene-CYJ01_RS07160;anticodon=(pos:complement(10836..10838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07160;product=tRNA-Met NZ_PJUR01000015.1 tRNAscan-SE exon 10799 10872 . - . ID=exon-CYJ01_RS07160-1;Parent=rna-CYJ01_RS07160;anticodon=(pos:complement(10836..10838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07160;product=tRNA-Met NZ_PJUR01000015.1 RefSeq gene 10983 11054 . - . ID=gene-CYJ01_RS07165;Name=CYJ01_RS07165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS07165;old_locus_tag=CYJ01_07165 NZ_PJUR01000015.1 tRNAscan-SE tRNA 10983 11054 . - . ID=rna-CYJ01_RS07165;Parent=gene-CYJ01_RS07165;anticodon=(pos:complement(11019..11021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07165;product=tRNA-Glu NZ_PJUR01000015.1 tRNAscan-SE exon 10983 11054 . - . ID=exon-CYJ01_RS07165-1;Parent=rna-CYJ01_RS07165;anticodon=(pos:complement(11019..11021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS07165;product=tRNA-Glu NZ_PJUR01000015.1 RefSeq gene 11161 12054 . + . ID=gene-CYJ01_RS07170;Name=CYJ01_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07170;old_locus_tag=CYJ01_07170 NZ_PJUR01000015.1 Protein Homology CDS 11161 12054 . + 0 ID=cds-WP_014612679.1;Parent=gene-CYJ01_RS07170;Dbxref=GenBank:WP_014612679.1;Name=WP_014612679.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729824.1;locus_tag=CYJ01_RS07170;product=YitT family protein;protein_id=WP_014612679.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 12272 13555 . - . ID=gene-CYJ01_RS07175;Name=CYJ01_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07175;old_locus_tag=CYJ01_07175 NZ_PJUR01000015.1 Protein Homology CDS 12272 13555 . - 0 ID=cds-WP_037541991.1;Parent=gene-CYJ01_RS07175;Dbxref=GenBank:WP_037541991.1;Name=WP_037541991.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CYJ01_RS07175;product=adenylosuccinate synthase;protein_id=WP_037541991.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 13927 15327 . - . ID=gene-CYJ01_RS07180;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS07180;old_locus_tag=CYJ01_07180 NZ_PJUR01000015.1 Protein Homology CDS 13927 15327 . - 0 ID=cds-WP_014612677.1;Parent=gene-CYJ01_RS07180;Dbxref=GenBank:WP_014612677.1;Name=WP_014612677.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=CYJ01_RS07180;product=replicative DNA helicase;protein_id=WP_014612677.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 15483 15686 . - . ID=gene-CYJ01_RS12275;Name=CYJ01_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12275;old_locus_tag=CYJ01_07185 NZ_PJUR01000015.1 Protein Homology CDS 15483 15686 . - 0 ID=cds-WP_080552904.1;Parent=gene-CYJ01_RS12275;Dbxref=GenBank:WP_080552904.1;Name=WP_080552904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=CYJ01_RS12275;product=DUF6007 family protein;protein_id=WP_080552904.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 15788 16234 . - . ID=gene-CYJ01_RS07190;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CYJ01_RS07190;old_locus_tag=CYJ01_07190 NZ_PJUR01000015.1 Protein Homology CDS 15788 16234 . - 0 ID=cds-WP_014612676.1;Parent=gene-CYJ01_RS07190;Dbxref=GenBank:WP_014612676.1;Name=WP_014612676.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=CYJ01_RS07190;product=50S ribosomal protein L9;protein_id=WP_014612676.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 16231 18198 . - . ID=gene-CYJ01_RS07195;Name=CYJ01_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07195;old_locus_tag=CYJ01_07195 NZ_PJUR01000015.1 Protein Homology CDS 16231 18198 . - 0 ID=cds-WP_096536495.1;Parent=gene-CYJ01_RS07195;Dbxref=GenBank:WP_096536495.1;Name=WP_096536495.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CYJ01_RS07195;product=DHH family phosphoesterase;protein_id=WP_096536495.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 18203 19114 . - . ID=gene-CYJ01_RS07200;Name=CYJ01_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07200;old_locus_tag=CYJ01_07200 NZ_PJUR01000015.1 Protein Homology CDS 18203 19114 . - 0 ID=cds-WP_037541988.1;Parent=gene-CYJ01_RS07200;Dbxref=GenBank:WP_037541988.1;Name=WP_037541988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=CYJ01_RS07200;product=DUF2232 domain-containing protein;protein_id=WP_037541988.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 19346 20311 . - . ID=gene-CYJ01_RS07205;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=CYJ01_RS07205;old_locus_tag=CYJ01_07205 NZ_PJUR01000015.1 Protein Homology CDS 19346 20311 . - 0 ID=cds-WP_014612673.1;Parent=gene-CYJ01_RS07205;Dbxref=GenBank:WP_014612673.1;Name=WP_014612673.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=CYJ01_RS07205;product=homoserine O-acetyltransferase MetX;protein_id=WP_014612673.1;transl_table=11 NZ_PJUR01000015.1 cmsearch riboswitch 20395 20499 . - . ID=id-NZ_PJUR01000015.1:20395..20499;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000015.1 RefSeq gene 20566 20895 . - . ID=gene-CYJ01_RS07210;Name=CYJ01_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07210;old_locus_tag=CYJ01_07210 NZ_PJUR01000015.1 Protein Homology CDS 20566 20895 . - 0 ID=cds-WP_014612672.1;Parent=gene-CYJ01_RS07210;Dbxref=GenBank:WP_014612672.1;Name=WP_014612672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166060.1;locus_tag=CYJ01_RS07210;product=AzlD domain-containing protein;protein_id=WP_014612672.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 20892 21584 . - . ID=gene-CYJ01_RS07215;Name=CYJ01_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07215;old_locus_tag=CYJ01_07215 NZ_PJUR01000015.1 Protein Homology CDS 20892 21584 . - 0 ID=cds-WP_037541986.1;Parent=gene-CYJ01_RS07215;Dbxref=GenBank:WP_037541986.1;Name=WP_037541986.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498766.1;locus_tag=CYJ01_RS07215;product=AzlC family ABC transporter permease;protein_id=WP_037541986.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 21899 23179 . - . ID=gene-CYJ01_RS07220;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CYJ01_RS07220;old_locus_tag=CYJ01_07220 NZ_PJUR01000015.1 Protein Homology CDS 21899 23179 . - 0 ID=cds-WP_015729830.1;Parent=gene-CYJ01_RS07220;Dbxref=GenBank:WP_015729830.1;Name=WP_015729830.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=CYJ01_RS07220;product=serine--tRNA ligase;protein_id=WP_015729830.1;transl_table=11 NZ_PJUR01000015.1 cmsearch binding_site 23254 23447 . - . ID=id-NZ_PJUR01000015.1:23254..23447;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000015.1 RefSeq gene 23497 24999 . - . ID=gene-CYJ01_RS07225;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CYJ01_RS07225;old_locus_tag=CYJ01_07225 NZ_PJUR01000015.1 Protein Homology CDS 23497 24999 . - 0 ID=cds-WP_020219988.1;Parent=gene-CYJ01_RS07225;Dbxref=GenBank:WP_020219988.1;Name=WP_020219988.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729831.1;locus_tag=CYJ01_RS07225;product=histidine ammonia-lyase;protein_id=WP_020219988.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 25349 26164 . + . ID=gene-CYJ01_RS07230;Name=CYJ01_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07230;old_locus_tag=CYJ01_07230 NZ_PJUR01000015.1 Protein Homology CDS 25349 26164 . + 0 ID=cds-WP_014612668.1;Parent=gene-CYJ01_RS07230;Dbxref=GenBank:WP_014612668.1;Name=WP_014612668.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612668.1;locus_tag=CYJ01_RS07230;product=NAD(P)H-hydrate dehydratase;protein_id=WP_014612668.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 26414 29050 . - . ID=gene-CYJ01_RS07235;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07235;old_locus_tag=CYJ01_07235 NZ_PJUR01000015.1 Protein Homology CDS 26414 29050 . - 0 ID=cds-WP_070407307.1;Parent=gene-CYJ01_RS07235;Dbxref=GenBank:WP_070407307.1;Name=WP_070407307.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729832.1;locus_tag=CYJ01_RS07235;product=DNA gyrase subunit A;protein_id=WP_070407307.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 29086 31017 . - . ID=gene-CYJ01_RS07240;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CYJ01_RS07240;old_locus_tag=CYJ01_07240 NZ_PJUR01000015.1 Protein Homology CDS 29086 31017 . - 0 ID=cds-WP_373366349.1;Parent=gene-CYJ01_RS07240;Dbxref=GenBank:WP_373366349.1;Name=WP_373366349.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=CYJ01_RS07240;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_373366349.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 31031 32146 . - . ID=gene-CYJ01_RS07245;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CYJ01_RS07245;old_locus_tag=CYJ01_07245 NZ_PJUR01000015.1 Protein Homology CDS 31031 32146 . - 0 ID=cds-WP_014612665.1;Parent=gene-CYJ01_RS07245;Dbxref=GenBank:WP_014612665.1;Name=WP_014612665.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169017.1;locus_tag=CYJ01_RS07245;product=DNA replication/repair protein RecF;protein_id=WP_014612665.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 32143 32382 . - . ID=gene-CYJ01_RS07250;Name=CYJ01_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07250;old_locus_tag=CYJ01_07250 NZ_PJUR01000015.1 Protein Homology CDS 32143 32382 . - 0 ID=cds-WP_019166052.1;Parent=gene-CYJ01_RS07250;Dbxref=GenBank:WP_019166052.1;Name=WP_019166052.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425730.1;locus_tag=CYJ01_RS07250;product=RNA-binding S4 domain-containing protein;protein_id=WP_019166052.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 32502 33191 . - . ID=gene-CYJ01_RS07255;Name=CYJ01_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07255;old_locus_tag=CYJ01_07255 NZ_PJUR01000015.1 Protein Homology CDS 32502 33191 . - 0 ID=cds-WP_063278708.1;Parent=gene-CYJ01_RS07255;Dbxref=GenBank:WP_063278708.1;Name=WP_063278708.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729834.1;locus_tag=CYJ01_RS07255;product=DsbA family protein;protein_id=WP_063278708.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 33474 34607 . - . ID=gene-CYJ01_RS07260;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CYJ01_RS07260;old_locus_tag=CYJ01_07260 NZ_PJUR01000015.1 Protein Homology CDS 33474 34607 . - 0 ID=cds-WP_014612662.1;Parent=gene-CYJ01_RS07260;Dbxref=GenBank:WP_014612662.1;Name=WP_014612662.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CYJ01_RS07260;product=DNA polymerase III subunit beta;protein_id=WP_014612662.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 34779 36122 . - . ID=gene-CYJ01_RS07265;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07265;old_locus_tag=CYJ01_07265 NZ_PJUR01000015.1 Protein Homology CDS 34779 36122 . - 0 ID=cds-WP_015729836.1;Parent=gene-CYJ01_RS07265;Dbxref=GenBank:WP_015729836.1;Name=WP_015729836.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168324.1;locus_tag=CYJ01_RS07265;product=chromosomal replication initiator protein DnaA;protein_id=WP_015729836.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 36666 36803 . + . ID=gene-CYJ01_RS07270;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CYJ01_RS07270;old_locus_tag=CYJ01_07270 NZ_PJUR01000015.1 Protein Homology CDS 36666 36803 . + 0 ID=cds-WP_000240855.1;Parent=gene-CYJ01_RS07270;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CYJ01_RS07270;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 36977 37324 . + . ID=gene-CYJ01_RS07275;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07275;old_locus_tag=CYJ01_07275 NZ_PJUR01000015.1 Protein Homology CDS 36977 37324 . + 0 ID=cds-WP_015728500.1;Parent=gene-CYJ01_RS07275;Dbxref=GenBank:WP_015728500.1;Name=WP_015728500.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=CYJ01_RS07275;product=ribonuclease P protein component;protein_id=WP_015728500.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 37459 38880 . + . ID=gene-CYJ01_RS07280;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CYJ01_RS07280;old_locus_tag=CYJ01_07280 NZ_PJUR01000015.1 Protein Homology CDS 37459 38880 . + 0 ID=cds-WP_049770154.1;Parent=gene-CYJ01_RS07280;Dbxref=GenBank:WP_049770154.1;Name=WP_049770154.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=CYJ01_RS07280;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_049770154.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 38899 40773 . + . ID=gene-CYJ01_RS07285;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CYJ01_RS07285;old_locus_tag=CYJ01_07285 NZ_PJUR01000015.1 Protein Homology CDS 38899 40773 . + 0 ID=cds-WP_101457407.1;Parent=gene-CYJ01_RS07285;Dbxref=GenBank:WP_101457407.1;Name=WP_101457407.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=CYJ01_RS07285;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_101457407.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 40774 41493 . + . ID=gene-CYJ01_RS07290;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CYJ01_RS07290;old_locus_tag=CYJ01_07290 NZ_PJUR01000015.1 Protein Homology CDS 40774 41493 . + 0 ID=cds-WP_037541963.1;Parent=gene-CYJ01_RS07290;Dbxref=GenBank:WP_037541963.1;Name=WP_037541963.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=CYJ01_RS07290;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_037541963.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 41531 42382 . + . ID=gene-CYJ01_RS07295;Name=CYJ01_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07295;old_locus_tag=CYJ01_07295 NZ_PJUR01000015.1 Protein Homology CDS 41531 42382 . + 0 ID=cds-WP_014614952.1;Parent=gene-CYJ01_RS07295;Dbxref=GenBank:WP_014614952.1;Name=WP_014614952.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=CYJ01_RS07295;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014614952.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 43021 43335 . + . ID=gene-CYJ01_RS07300;Name=CYJ01_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07300;old_locus_tag=CYJ01_07300 NZ_PJUR01000015.1 Protein Homology CDS 43021 43335 . + 0 ID=cds-WP_015728504.1;Parent=gene-CYJ01_RS07300;Dbxref=GenBank:WP_015728504.1;Name=WP_015728504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728504.1;locus_tag=CYJ01_RS07300;product=hypothetical protein;protein_id=WP_015728504.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 43485 43673 . + . ID=gene-CYJ01_RS07305;Name=CYJ01_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07305;old_locus_tag=CYJ01_07305 NZ_PJUR01000015.1 Protein Homology CDS 43485 43673 . + 0 ID=cds-WP_080552883.1;Parent=gene-CYJ01_RS07305;Dbxref=GenBank:WP_080552883.1;Name=WP_080552883.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469691.1;locus_tag=CYJ01_RS07305;product=helix-turn-helix transcriptional regulator;protein_id=WP_080552883.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 43680 44183 . + . ID=gene-CYJ01_RS07310;Name=CYJ01_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07310;old_locus_tag=CYJ01_07310 NZ_PJUR01000015.1 Protein Homology CDS 43680 44183 . + 0 ID=cds-WP_063284536.1;Parent=gene-CYJ01_RS07310;Dbxref=GenBank:WP_063284536.1;Name=WP_063284536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614948.1;locus_tag=CYJ01_RS07310;product=hypothetical protein;protein_id=WP_063284536.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 44247 44834 . - . ID=gene-CYJ01_RS07315;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=CYJ01_RS07315;old_locus_tag=CYJ01_07315 NZ_PJUR01000015.1 Protein Homology CDS 44247 44834 . - 0 ID=cds-WP_101457408.1;Parent=gene-CYJ01_RS07315;Dbxref=GenBank:WP_101457408.1;Name=WP_101457408.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=CYJ01_RS07315;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_101457408.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 44856 45473 . - . ID=gene-CYJ01_RS07320;Name=CYJ01_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07320;old_locus_tag=CYJ01_07320 NZ_PJUR01000015.1 Protein Homology CDS 44856 45473 . - 0 ID=cds-WP_014614946.1;Parent=gene-CYJ01_RS07320;Dbxref=GenBank:WP_014614946.1;Name=WP_014614946.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=CYJ01_RS07320;product=flavin reductase family protein;protein_id=WP_014614946.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 45519 46481 . - . ID=gene-CYJ01_RS07325;Name=CYJ01_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07325;old_locus_tag=CYJ01_07325 NZ_PJUR01000015.1 Protein Homology CDS 45519 46481 . - 0 ID=cds-WP_014614945.1;Parent=gene-CYJ01_RS07325;Dbxref=GenBank:WP_014614945.1;Name=WP_014614945.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614945.1;locus_tag=CYJ01_RS07325;product=ring-cleaving dioxygenase;protein_id=WP_014614945.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 46564 46989 . - . ID=gene-CYJ01_RS07330;Name=CYJ01_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07330;old_locus_tag=CYJ01_07330 NZ_PJUR01000015.1 Protein Homology CDS 46564 46989 . - 0 ID=cds-WP_014614944.1;Parent=gene-CYJ01_RS07330;Dbxref=GenBank:WP_014614944.1;Name=WP_014614944.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614944.1;locus_tag=CYJ01_RS07330;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014614944.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 47156 47431 . + . ID=gene-CYJ01_RS07335;Name=CYJ01_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07335;old_locus_tag=CYJ01_07335 NZ_PJUR01000015.1 Protein Homology CDS 47156 47431 . + 0 ID=cds-WP_014614943.1;Parent=gene-CYJ01_RS07335;Dbxref=GenBank:WP_014614943.1;Name=WP_014614943.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168313.1;locus_tag=CYJ01_RS07335;product=GNAT family N-acetyltransferase;protein_id=WP_014614943.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 47509 48426 . - . ID=gene-CYJ01_RS07340;Name=CYJ01_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07340;old_locus_tag=CYJ01_07340 NZ_PJUR01000015.1 Protein Homology CDS 47509 48426 . - 0 ID=cds-WP_014614942.1;Parent=gene-CYJ01_RS07340;Dbxref=GenBank:WP_014614942.1;Name=WP_014614942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614942.1;locus_tag=CYJ01_RS07340;product=DUF5996 family protein;protein_id=WP_014614942.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 49171 49626 . + . ID=gene-CYJ01_RS07345;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=CYJ01_RS07345;old_locus_tag=CYJ01_07345 NZ_PJUR01000015.1 Protein Homology CDS 49171 49626 . + 0 ID=cds-WP_014614941.1;Parent=gene-CYJ01_RS07345;Dbxref=GenBank:WP_014614941.1;Name=WP_014614941.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=CYJ01_RS07345;product=urease accessory protein UreE;protein_id=WP_014614941.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 49619 50311 . + . ID=gene-CYJ01_RS07350;Name=CYJ01_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07350;old_locus_tag=CYJ01_07350 NZ_PJUR01000015.1 Protein Homology CDS 49619 50311 . + 0 ID=cds-WP_063278712.1;Parent=gene-CYJ01_RS07350;Dbxref=GenBank:WP_063278712.1;Name=WP_063278712.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=CYJ01_RS07350;product=urease accessory protein UreF;protein_id=WP_063278712.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 50324 50935 . + . ID=gene-CYJ01_RS07355;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CYJ01_RS07355;old_locus_tag=CYJ01_07355 NZ_PJUR01000015.1 Protein Homology CDS 50324 50935 . + 0 ID=cds-WP_014614939.1;Parent=gene-CYJ01_RS07355;Dbxref=GenBank:WP_014614939.1;Name=WP_014614939.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614939.1;locus_tag=CYJ01_RS07355;product=urease accessory protein UreG;protein_id=WP_014614939.1;transl_table=11 NZ_PJUR01000015.1 RefSeq gene 50935 51768 . + . ID=gene-CYJ01_RS07360;Name=CYJ01_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07360;old_locus_tag=CYJ01_07360 NZ_PJUR01000015.1 Protein Homology CDS 50935 51768 . + 0 ID=cds-WP_015728509.1;Parent=gene-CYJ01_RS07360;Dbxref=GenBank:WP_015728509.1;Name=WP_015728509.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=CYJ01_RS07360;product=urease accessory protein UreD;protein_id=WP_015728509.1;transl_table=11 ##sequence-region NZ_PJUR01000016.1 1 57021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000016.1 RefSeq region 1 57021 . + . ID=NZ_PJUR01000016.1:1..57021;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000016.1 RefSeq gene 43 363 . + . ID=gene-CYJ01_RS07365;Name=CYJ01_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07365;old_locus_tag=CYJ01_07365 NZ_PJUR01000016.1 Protein Homology CDS 43 363 . + 0 ID=cds-WP_101457409.1;Parent=gene-CYJ01_RS07365;Dbxref=GenBank:WP_101457409.1;Name=WP_101457409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614696.1;locus_tag=CYJ01_RS07365;product=ArsR/SmtB family transcription factor;protein_id=WP_101457409.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 360 1649 . + . ID=gene-CYJ01_RS07370;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=CYJ01_RS07370;old_locus_tag=CYJ01_07370 NZ_PJUR01000016.1 Protein Homology CDS 360 1649 . + 0 ID=cds-WP_101457410.1;Parent=gene-CYJ01_RS07370;Dbxref=GenBank:WP_101457410.1;Name=WP_101457410.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304041.1;locus_tag=CYJ01_RS07370;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_101457410.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 1665 2069 . + . ID=gene-CYJ01_RS07375;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CYJ01_RS07375;old_locus_tag=CYJ01_07375 NZ_PJUR01000016.1 Protein Homology CDS 1665 2069 . + 0 ID=cds-WP_101457411.1;Parent=gene-CYJ01_RS07375;Dbxref=GenBank:WP_101457411.1;Name=WP_101457411.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614694.1;locus_tag=CYJ01_RS07375;product=arsenate reductase (thioredoxin);protein_id=WP_101457411.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 2201 3037 . - . ID=gene-CYJ01_RS07380;Name=CYJ01_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07380;old_locus_tag=CYJ01_07380 NZ_PJUR01000016.1 Protein Homology CDS 2201 3037 . - 0 ID=cds-WP_014614689.1;Parent=gene-CYJ01_RS07380;Dbxref=GenBank:WP_014614689.1;Name=WP_014614689.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=CYJ01_RS07380;product=lipoate--protein ligase family protein;protein_id=WP_014614689.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 3037 4026 . - . ID=gene-CYJ01_RS07385;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CYJ01_RS07385;old_locus_tag=CYJ01_07385 NZ_PJUR01000016.1 Protein Homology CDS 3037 4026 . - 0 ID=cds-WP_014614688.1;Parent=gene-CYJ01_RS07385;Dbxref=GenBank:WP_014614688.1;Name=WP_014614688.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=CYJ01_RS07385;product=phosphate acetyltransferase;protein_id=WP_014614688.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 4194 4949 . + . ID=gene-CYJ01_RS07390;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS07390;old_locus_tag=CYJ01_07390 NZ_PJUR01000016.1 Protein Homology CDS 4194 4949 . + 0 ID=cds-WP_015728662.1;Parent=gene-CYJ01_RS07390;Dbxref=GenBank:WP_015728662.1;Name=WP_015728662.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166293.1;locus_tag=CYJ01_RS07390;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_015728662.1;transl_table=11 NZ_PJUR01000016.1 RefSeq pseudogene 5159 5499 . - . ID=gene-CYJ01_RS07395;Name=CYJ01_RS07395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS07395;old_locus_tag=CYJ01_07395;pseudo=true NZ_PJUR01000016.1 Protein Homology CDS 5159 5499 . - 0 ID=cds-CYJ01_RS07395;Parent=gene-CYJ01_RS07395;Note=frameshifted;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614686.1;locus_tag=CYJ01_RS07395;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_PJUR01000016.1 RefSeq pseudogene 5496 5765 . - . ID=gene-CYJ01_RS12430;Name=CYJ01_RS12430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12430;old_locus_tag=CYJ01_07400;pseudo=true NZ_PJUR01000016.1 Protein Homology CDS 5496 5765 . - 0 ID=cds-CYJ01_RS12430;Parent=gene-CYJ01_RS12430;Note=internal stop;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477818.1;locus_tag=CYJ01_RS12430;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 6002 6757 . + . ID=gene-CYJ01_RS07405;Name=CYJ01_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07405;old_locus_tag=CYJ01_07405 NZ_PJUR01000016.1 Protein Homology CDS 6002 6757 . + 0 ID=cds-WP_014614684.1;Parent=gene-CYJ01_RS07405;Dbxref=GenBank:WP_014614684.1;Name=WP_014614684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614684.1;locus_tag=CYJ01_RS07405;product=threonine/serine exporter family protein;protein_id=WP_014614684.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 6770 7231 . + . ID=gene-CYJ01_RS07410;Name=CYJ01_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07410;old_locus_tag=CYJ01_07410 NZ_PJUR01000016.1 Protein Homology CDS 6770 7231 . + 0 ID=cds-WP_014614683.1;Parent=gene-CYJ01_RS07410;Dbxref=GenBank:WP_014614683.1;Name=WP_014614683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166289.1;locus_tag=CYJ01_RS07410;product=threonine/serine exporter family protein;protein_id=WP_014614683.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 7811 9352 . + . ID=gene-CYJ01_RS07415;Name=CYJ01_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07415;old_locus_tag=CYJ01_07415 NZ_PJUR01000016.1 Protein Homology CDS 7811 9352 . + 0 ID=cds-WP_014614682.1;Parent=gene-CYJ01_RS07415;Dbxref=GenBank:WP_014614682.1;Name=WP_014614682.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166288.1;locus_tag=CYJ01_RS07415;product=SLC13 family permease;protein_id=WP_014614682.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 9505 9837 . + . ID=gene-CYJ01_RS07420;Name=CYJ01_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07420;old_locus_tag=CYJ01_07420 NZ_PJUR01000016.1 Protein Homology CDS 9505 9837 . + 0 ID=cds-WP_015728665.1;Parent=gene-CYJ01_RS07420;Dbxref=GenBank:WP_015728665.1;Name=WP_015728665.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614681.1;locus_tag=CYJ01_RS07420;product=PadR family transcriptional regulator;protein_id=WP_015728665.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 9821 10426 . + . ID=gene-CYJ01_RS07425;Name=CYJ01_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07425;old_locus_tag=CYJ01_07425 NZ_PJUR01000016.1 Protein Homology CDS 9821 10426 . + 0 ID=cds-WP_101457412.1;Parent=gene-CYJ01_RS07425;Dbxref=GenBank:WP_101457412.1;Name=WP_101457412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728666.1;locus_tag=CYJ01_RS07425;product=DUF2812 domain-containing protein;protein_id=WP_101457412.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 10570 11280 . - . ID=gene-CYJ01_RS07430;Name=CYJ01_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07430;old_locus_tag=CYJ01_07430 NZ_PJUR01000016.1 Protein Homology CDS 10570 11280 . - 0 ID=cds-WP_037543871.1;Parent=gene-CYJ01_RS07430;Dbxref=GenBank:WP_037543871.1;Name=WP_037543871.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614679.1;locus_tag=CYJ01_RS07430;product=trypsin-like serine peptidase;protein_id=WP_037543871.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 11499 12206 . - . ID=gene-CYJ01_RS07435;Name=CYJ01_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07435;old_locus_tag=CYJ01_07435 NZ_PJUR01000016.1 Protein Homology CDS 11499 12206 . - 0 ID=cds-WP_101457413.1;Parent=gene-CYJ01_RS07435;Dbxref=GenBank:WP_101457413.1;Name=WP_101457413.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728669.1;locus_tag=CYJ01_RS07435;product=trypsin-like serine peptidase;protein_id=WP_101457413.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 12427 13137 . - . ID=gene-CYJ01_RS07440;Name=CYJ01_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07440;old_locus_tag=CYJ01_07440 NZ_PJUR01000016.1 Protein Homology CDS 12427 13137 . - 0 ID=cds-WP_015728670.1;Parent=gene-CYJ01_RS07440;Dbxref=GenBank:WP_015728670.1;Name=WP_015728670.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614677.1;locus_tag=CYJ01_RS07440;product=trypsin-like serine peptidase;protein_id=WP_015728670.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 13340 14098 . - . ID=gene-CYJ01_RS07445;Name=CYJ01_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07445;old_locus_tag=CYJ01_07445 NZ_PJUR01000016.1 Protein Homology CDS 13340 14098 . - 0 ID=cds-WP_101457414.1;Parent=gene-CYJ01_RS07445;Dbxref=GenBank:WP_101457414.1;Name=WP_101457414.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614676.1;locus_tag=CYJ01_RS07445;product=trypsin-like serine peptidase;protein_id=WP_101457414.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 14461 15216 . - . ID=gene-CYJ01_RS07450;Name=CYJ01_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07450;old_locus_tag=CYJ01_07450 NZ_PJUR01000016.1 Protein Homology CDS 14461 15216 . - 0 ID=cds-WP_014614675.1;Parent=gene-CYJ01_RS07450;Dbxref=GenBank:WP_014614675.1;Name=WP_014614675.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614675.1;locus_tag=CYJ01_RS07450;product=trypsin-like serine peptidase;protein_id=WP_014614675.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 15574 16281 . - . ID=gene-CYJ01_RS07455;Name=CYJ01_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07455;old_locus_tag=CYJ01_07455 NZ_PJUR01000016.1 Protein Homology CDS 15574 16281 . - 0 ID=cds-WP_096533794.1;Parent=gene-CYJ01_RS07455;Dbxref=GenBank:WP_096533794.1;Name=WP_096533794.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614674.1;locus_tag=CYJ01_RS07455;product=trypsin-like serine peptidase;protein_id=WP_096533794.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 16620 17342 . - . ID=gene-CYJ01_RS07460;Name=CYJ01_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07460;old_locus_tag=CYJ01_07460 NZ_PJUR01000016.1 Protein Homology CDS 16620 17342 . - 0 ID=cds-WP_065354557.1;Parent=gene-CYJ01_RS07460;Dbxref=GenBank:WP_065354557.1;Name=WP_065354557.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728674.1;locus_tag=CYJ01_RS07460;product=trypsin-like serine peptidase;protein_id=WP_065354557.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 17665 18384 . - . ID=gene-CYJ01_RS07465;Name=CYJ01_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07465;old_locus_tag=CYJ01_07465 NZ_PJUR01000016.1 Protein Homology CDS 17665 18384 . - 0 ID=cds-WP_101457415.1;Parent=gene-CYJ01_RS07465;Dbxref=GenBank:WP_101457415.1;Name=WP_101457415.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728675.1;locus_tag=CYJ01_RS07465;product=trypsin-like serine peptidase;protein_id=WP_101457415.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 18551 19267 . - . ID=gene-CYJ01_RS07470;Name=CYJ01_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07470;old_locus_tag=CYJ01_07470 NZ_PJUR01000016.1 Protein Homology CDS 18551 19267 . - 0 ID=cds-WP_101457416.1;Parent=gene-CYJ01_RS07470;Dbxref=GenBank:WP_101457416.1;Name=WP_101457416.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614672.1;locus_tag=CYJ01_RS07470;product=trypsin-like serine peptidase;protein_id=WP_101457416.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 19889 20224 . + . ID=gene-CYJ01_RS07475;Name=CYJ01_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07475;old_locus_tag=CYJ01_07475 NZ_PJUR01000016.1 Protein Homology CDS 19889 20224 . + 0 ID=cds-WP_014614671.1;Parent=gene-CYJ01_RS07475;Dbxref=GenBank:WP_014614671.1;Name=WP_014614671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220022.1;locus_tag=CYJ01_RS07475;product=YuzB family protein;protein_id=WP_014614671.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 20634 21113 . + . ID=gene-CYJ01_RS07480;Name=CYJ01_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07480;old_locus_tag=CYJ01_07480 NZ_PJUR01000016.1 Protein Homology CDS 20634 21113 . + 0 ID=cds-WP_014614670.1;Parent=gene-CYJ01_RS07480;Dbxref=GenBank:WP_014614670.1;Name=WP_014614670.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=CYJ01_RS07480;product=GNAT family N-acetyltransferase;protein_id=WP_014614670.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 21136 22434 . + . ID=gene-CYJ01_RS07485;Name=CYJ01_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07485;old_locus_tag=CYJ01_07485 NZ_PJUR01000016.1 Protein Homology CDS 21136 22434 . + 0 ID=cds-WP_015728676.1;Parent=gene-CYJ01_RS07485;Dbxref=GenBank:WP_015728676.1;Name=WP_015728676.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=CYJ01_RS07485;product=HD domain-containing protein;protein_id=WP_015728676.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 22512 23027 . + . ID=gene-CYJ01_RS07490;Name=CYJ01_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07490;old_locus_tag=CYJ01_07490 NZ_PJUR01000016.1 Protein Homology CDS 22512 23027 . + 0 ID=cds-WP_037543858.1;Parent=gene-CYJ01_RS07490;Dbxref=GenBank:WP_037543858.1;Name=WP_037543858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166270.1;locus_tag=CYJ01_RS07490;product=YwhD family protein;protein_id=WP_037543858.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 23243 23653 . + . ID=gene-CYJ01_RS07495;Name=CYJ01_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07495;old_locus_tag=CYJ01_07495 NZ_PJUR01000016.1 Protein Homology CDS 23243 23653 . + 0 ID=cds-WP_014614667.1;Parent=gene-CYJ01_RS07495;Dbxref=GenBank:WP_014614667.1;Name=WP_014614667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220024.1;locus_tag=CYJ01_RS07495;product=YwiB family protein;protein_id=WP_014614667.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 23655 25313 . + . ID=gene-CYJ01_RS07500;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CYJ01_RS07500;old_locus_tag=CYJ01_07500 NZ_PJUR01000016.1 Protein Homology CDS 23655 25313 . + 0 ID=cds-WP_063278860.1;Parent=gene-CYJ01_RS07500;Dbxref=GenBank:WP_063278860.1;Name=WP_063278860.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CYJ01_RS07500;product=arginine--tRNA ligase;protein_id=WP_063278860.1;transl_table=11 NZ_PJUR01000016.1 RefSeq pseudogene 25355 26038 . - . ID=gene-CYJ01_RS07505;Name=tatC;end_range=26038,.;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=CYJ01_RS07505;old_locus_tag=CYJ01_07505;partial=true;pseudo=true NZ_PJUR01000016.1 Protein Homology CDS 25355 26038 . - 0 ID=cds-CYJ01_RS07505;Parent=gene-CYJ01_RS07505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015628,GO:0005886;end_range=26038,.;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532733.1;locus_tag=CYJ01_RS07505;partial=true;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 26055 26276 . - . ID=gene-CYJ01_RS07510;Name=CYJ01_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07510;old_locus_tag=CYJ01_07510 NZ_PJUR01000016.1 Protein Homology CDS 26055 26276 . - 0 ID=cds-WP_014614664.1;Parent=gene-CYJ01_RS07510;Dbxref=GenBank:WP_014614664.1;Name=WP_014614664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614664.1;locus_tag=CYJ01_RS07510;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_014614664.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 26959 28317 . - . ID=gene-CYJ01_RS07515;Name=CYJ01_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07515;old_locus_tag=CYJ01_07515 NZ_PJUR01000016.1 Protein Homology CDS 26959 28317 . - 0 ID=cds-WP_037543467.1;Parent=gene-CYJ01_RS07515;Dbxref=GenBank:WP_037543467.1;Name=WP_037543467.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488327.1;locus_tag=CYJ01_RS07515;product=TrkH family potassium uptake protein;protein_id=WP_037543467.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 28334 29986 . - . ID=gene-CYJ01_RS07520;Name=CYJ01_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07520;old_locus_tag=CYJ01_07520 NZ_PJUR01000016.1 Protein Homology CDS 28334 29986 . - 0 ID=cds-WP_101457417.1;Parent=gene-CYJ01_RS07520;Dbxref=GenBank:WP_101457417.1;Name=WP_101457417.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=CYJ01_RS07520;product=S1C family serine protease;protein_id=WP_101457417.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 30297 31106 . - . ID=gene-CYJ01_RS07525;Name=CYJ01_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07525;old_locus_tag=CYJ01_07525 NZ_PJUR01000016.1 Protein Homology CDS 30297 31106 . - 0 ID=cds-WP_172425808.1;Parent=gene-CYJ01_RS07525;Dbxref=GenBank:WP_172425808.1;Name=WP_172425808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614342.1;locus_tag=CYJ01_RS07525;product=TerC family protein;protein_id=WP_172425808.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 31569 33131 . - . ID=gene-CYJ01_RS07530;Name=CYJ01_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07530;old_locus_tag=CYJ01_07530 NZ_PJUR01000016.1 Protein Homology CDS 31569 33131 . - 0 ID=cds-WP_014614343.1;Parent=gene-CYJ01_RS07530;Dbxref=GenBank:WP_014614343.1;Name=WP_014614343.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=CYJ01_RS07530;product=peptide chain release factor 3;protein_id=WP_014614343.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 33152 33391 . - . ID=gene-CYJ01_RS07535;Name=CYJ01_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07535;old_locus_tag=CYJ01_07535 NZ_PJUR01000016.1 Protein Homology CDS 33152 33391 . - 0 ID=cds-WP_014614344.1;Parent=gene-CYJ01_RS07535;Dbxref=GenBank:WP_014614344.1;Name=WP_014614344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=CYJ01_RS07535;product=YueH family protein;protein_id=WP_014614344.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 33381 34865 . - . ID=gene-CYJ01_RS07540;Name=CYJ01_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07540;old_locus_tag=CYJ01_07540 NZ_PJUR01000016.1 Protein Homology CDS 33381 34865 . - 0 ID=cds-WP_101457418.1;Parent=gene-CYJ01_RS07540;Dbxref=GenBank:WP_101457418.1;Name=WP_101457418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=CYJ01_RS07540;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_101457418.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 35535 36710 . + . ID=gene-CYJ01_RS07550;Name=CYJ01_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07550;old_locus_tag=CYJ01_07550 NZ_PJUR01000016.1 Protein Homology CDS 35535 36710 . + 0 ID=cds-WP_014614346.1;Parent=gene-CYJ01_RS07550;Dbxref=GenBank:WP_014614346.1;Name=WP_014614346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167265.1;locus_tag=CYJ01_RS07550;product=diglucosyl diacylglycerol synthase;protein_id=WP_014614346.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 36688 37872 . + . ID=gene-CYJ01_RS07555;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07555;old_locus_tag=CYJ01_07555 NZ_PJUR01000016.1 Protein Homology CDS 36688 37872 . + 0 ID=cds-WP_070407522.1;Parent=gene-CYJ01_RS07555;Dbxref=GenBank:WP_070407522.1;Name=WP_070407522.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614347.1;locus_tag=CYJ01_RS07555;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_070407522.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 38278 39765 . + . ID=gene-CYJ01_RS07560;Name=CYJ01_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07560;old_locus_tag=CYJ01_07560 NZ_PJUR01000016.1 Protein Homology CDS 38278 39765 . + 0 ID=cds-WP_065354437.1;Parent=gene-CYJ01_RS07560;Dbxref=GenBank:WP_065354437.1;Name=WP_065354437.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165969.1;locus_tag=CYJ01_RS07560;product=arylsulfatase;protein_id=WP_065354437.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 39870 40766 . + . ID=gene-CYJ01_RS07565;Name=CYJ01_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07565;old_locus_tag=CYJ01_07565 NZ_PJUR01000016.1 Protein Homology CDS 39870 40766 . + 0 ID=cds-WP_015728906.1;Parent=gene-CYJ01_RS07565;Dbxref=GenBank:WP_015728906.1;Name=WP_015728906.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168844.1;locus_tag=CYJ01_RS07565;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_015728906.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 40753 41646 . + . ID=gene-CYJ01_RS07570;Name=CYJ01_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07570;old_locus_tag=CYJ01_07570 NZ_PJUR01000016.1 Protein Homology CDS 40753 41646 . + 0 ID=cds-WP_037543485.1;Parent=gene-CYJ01_RS07570;Dbxref=GenBank:WP_037543485.1;Name=WP_037543485.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165971.1;locus_tag=CYJ01_RS07570;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_037543485.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 42218 42724 . - . ID=gene-CYJ01_RS07575;Name=CYJ01_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07575;old_locus_tag=CYJ01_07575 NZ_PJUR01000016.1 Protein Homology CDS 42218 42724 . - 0 ID=cds-WP_063279083.1;Parent=gene-CYJ01_RS07575;Dbxref=GenBank:WP_063279083.1;Name=WP_063279083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728896.1;locus_tag=CYJ01_RS07575;product=2'-5' RNA ligase family protein;protein_id=WP_063279083.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 42778 43512 . - . ID=gene-CYJ01_RS07580;Name=CYJ01_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07580;old_locus_tag=CYJ01_07580 NZ_PJUR01000016.1 Protein Homology CDS 42778 43512 . - 0 ID=cds-WP_014614352.1;Parent=gene-CYJ01_RS07580;Dbxref=GenBank:WP_014614352.1;Name=WP_014614352.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728895.1;locus_tag=CYJ01_RS07580;product=esterase family protein;protein_id=WP_014614352.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 43615 45186 . - . ID=gene-CYJ01_RS07585;Name=CYJ01_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07585;old_locus_tag=CYJ01_07585 NZ_PJUR01000016.1 Protein Homology CDS 43615 45186 . - 0 ID=cds-WP_014614353.1;Parent=gene-CYJ01_RS07585;Dbxref=GenBank:WP_014614353.1;Name=WP_014614353.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165974.1;locus_tag=CYJ01_RS07585;product=alanine/glycine:cation symporter family protein;protein_id=WP_014614353.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 45405 46502 . + . ID=gene-CYJ01_RS07590;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=CYJ01_RS07590;old_locus_tag=CYJ01_07590 NZ_PJUR01000016.1 Protein Homology CDS 45405 46502 . + 0 ID=cds-WP_014614354.1;Parent=gene-CYJ01_RS07590;Dbxref=GenBank:WP_014614354.1;Name=WP_014614354.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=CYJ01_RS07590;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_014614354.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 46794 47564 . - . ID=gene-CYJ01_RS07595;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CYJ01_RS07595;old_locus_tag=CYJ01_07595 NZ_PJUR01000016.1 Protein Homology CDS 46794 47564 . - 0 ID=cds-WP_037543489.1;Parent=gene-CYJ01_RS07595;Dbxref=GenBank:WP_037543489.1;Name=WP_037543489.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=CYJ01_RS07595;product=enoyl-ACP reductase FabI;protein_id=WP_037543489.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 47711 49546 . - . ID=gene-CYJ01_RS07600;Name=CYJ01_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07600;old_locus_tag=CYJ01_07600 NZ_PJUR01000016.1 Protein Homology CDS 47711 49546 . - 0 ID=cds-WP_101457419.1;Parent=gene-CYJ01_RS07600;Dbxref=GenBank:WP_101457419.1;Name=WP_101457419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165977.1;locus_tag=CYJ01_RS07600;product=monovalent cation:proton antiporter family protein;protein_id=WP_101457419.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 49557 50900 . - . ID=gene-CYJ01_RS07605;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CYJ01_RS07605;old_locus_tag=CYJ01_07605 NZ_PJUR01000016.1 Protein Homology CDS 49557 50900 . - 0 ID=cds-WP_373408314.1;Parent=gene-CYJ01_RS07605;Dbxref=GenBank:WP_373408314.1;Name=WP_373408314.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165978.1;locus_tag=CYJ01_RS07605;product=magnesium transporter;protein_id=WP_373408314.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 50971 51825 . - . ID=gene-CYJ01_RS07610;Name=CYJ01_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07610;old_locus_tag=CYJ01_07610 NZ_PJUR01000016.1 Protein Homology CDS 50971 51825 . - 0 ID=cds-WP_101457421.1;Parent=gene-CYJ01_RS07610;Dbxref=GenBank:WP_101457421.1;Name=WP_101457421.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=CYJ01_RS07610;product=RluA family pseudouridine synthase;protein_id=WP_101457421.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 51822 52631 . - . ID=gene-CYJ01_RS07615;Name=CYJ01_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07615;old_locus_tag=CYJ01_07615 NZ_PJUR01000016.1 Protein Homology CDS 51822 52631 . - 0 ID=cds-WP_014614362.1;Parent=gene-CYJ01_RS07615;Dbxref=GenBank:WP_014614362.1;Name=WP_014614362.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=CYJ01_RS07615;product=NAD kinase;protein_id=WP_014614362.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 52643 53281 . - . ID=gene-CYJ01_RS07620;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=CYJ01_RS07620;old_locus_tag=CYJ01_07620 NZ_PJUR01000016.1 Protein Homology CDS 52643 53281 . - 0 ID=cds-WP_014614363.1;Parent=gene-CYJ01_RS07620;Dbxref=GenBank:WP_014614363.1;Name=WP_014614363.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614363.1;locus_tag=CYJ01_RS07620;product=GTP diphosphokinase;protein_id=WP_014614363.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 53298 53645 . - . ID=gene-CYJ01_RS07625;Name=CYJ01_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07625;old_locus_tag=CYJ01_07625 NZ_PJUR01000016.1 Protein Homology CDS 53298 53645 . - 0 ID=cds-WP_014614364.1;Parent=gene-CYJ01_RS07625;Dbxref=GenBank:WP_014614364.1;Name=WP_014614364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276223.1;locus_tag=CYJ01_RS07625;product=UPF0738 family protein;protein_id=WP_014614364.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 53776 54357 . + . ID=gene-CYJ01_RS07630;Name=CYJ01_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07630;old_locus_tag=CYJ01_07630 NZ_PJUR01000016.1 Protein Homology CDS 53776 54357 . + 0 ID=cds-WP_015728889.1;Parent=gene-CYJ01_RS07630;Dbxref=GenBank:WP_015728889.1;Name=WP_015728889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728889.1;locus_tag=CYJ01_RS07630;product=CYTH domain-containing protein;protein_id=WP_015728889.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 54705 55076 . + . ID=gene-CYJ01_RS07635;Name=CYJ01_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07635;old_locus_tag=CYJ01_07635 NZ_PJUR01000016.1 Protein Homology CDS 54705 55076 . + 0 ID=cds-WP_015728888.1;Parent=gene-CYJ01_RS07635;Dbxref=GenBank:WP_015728888.1;Name=WP_015728888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167281.1;locus_tag=CYJ01_RS07635;product=truncated hemoglobin YjbI;protein_id=WP_015728888.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 55093 55881 . + . ID=gene-CYJ01_RS07640;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=CYJ01_RS07640;old_locus_tag=CYJ01_07640 NZ_PJUR01000016.1 Protein Homology CDS 55093 55881 . + 0 ID=cds-WP_014614367.1;Parent=gene-CYJ01_RS07640;Dbxref=GenBank:WP_014614367.1;Name=WP_014614367.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=CYJ01_RS07640;product=protease adaptor protein YjbH;protein_id=WP_014614367.1;transl_table=11 NZ_PJUR01000016.1 RefSeq gene 56129 56857 . - . ID=gene-CYJ01_RS07645;Name=CYJ01_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07645;old_locus_tag=CYJ01_07645 NZ_PJUR01000016.1 Protein Homology CDS 56129 56857 . - 0 ID=cds-WP_015728887.1;Parent=gene-CYJ01_RS07645;Dbxref=GenBank:WP_015728887.1;Name=WP_015728887.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728887.1;locus_tag=CYJ01_RS07645;product=M48 family metallopeptidase;protein_id=WP_015728887.1;transl_table=11 ##sequence-region NZ_PJUR01000017.1 1 49510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000017.1 RefSeq region 1 49510 . + . ID=NZ_PJUR01000017.1:1..49510;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000017.1 RefSeq gene 110 895 . - . ID=gene-CYJ01_RS07650;Name=CYJ01_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07650;old_locus_tag=CYJ01_07650 NZ_PJUR01000017.1 Protein Homology CDS 110 895 . - 0 ID=cds-WP_101457422.1;Parent=gene-CYJ01_RS07650;Dbxref=GenBank:WP_101457422.1;Name=WP_101457422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167129.1;locus_tag=CYJ01_RS07650;product=glycoside hydrolase family 2 protein;protein_id=WP_101457422.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 1030 1890 . + . ID=gene-CYJ01_RS07655;Name=CYJ01_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07655;old_locus_tag=CYJ01_07655 NZ_PJUR01000017.1 Protein Homology CDS 1030 1890 . + 0 ID=cds-WP_101457423.1;Parent=gene-CYJ01_RS07655;Dbxref=GenBank:WP_101457423.1;Name=WP_101457423.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729572.1;locus_tag=CYJ01_RS07655;product=AraC family transcriptional regulator;protein_id=WP_101457423.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 2062 3273 . + . ID=gene-CYJ01_RS07660;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CYJ01_RS07660;old_locus_tag=CYJ01_07660 NZ_PJUR01000017.1 Protein Homology CDS 2062 3273 . + 0 ID=cds-WP_101457424.1;Parent=gene-CYJ01_RS07660;Dbxref=GenBank:WP_101457424.1;Name=WP_101457424.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=CYJ01_RS07660;product=sodium/glutamate symporter;protein_id=WP_101457424.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 3300 4505 . - . ID=gene-CYJ01_RS07665;Name=CYJ01_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07665;old_locus_tag=CYJ01_07665 NZ_PJUR01000017.1 Protein Homology CDS 3300 4505 . - 0 ID=cds-WP_101457425.1;Parent=gene-CYJ01_RS07665;Dbxref=GenBank:WP_101457425.1;Name=WP_101457425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169589.1;locus_tag=CYJ01_RS07665;product=GTP-binding protein;protein_id=WP_101457425.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 4679 5710 . - . ID=gene-CYJ01_RS07670;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=CYJ01_RS07670;old_locus_tag=CYJ01_07670 NZ_PJUR01000017.1 Protein Homology CDS 4679 5710 . - 0 ID=cds-WP_063278987.1;Parent=gene-CYJ01_RS07670;Dbxref=GenBank:WP_063278987.1;Name=WP_063278987.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=CYJ01_RS07670;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_063278987.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 5888 6364 . + . ID=gene-CYJ01_RS07675;Name=CYJ01_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07675;old_locus_tag=CYJ01_07675 NZ_PJUR01000017.1 Protein Homology CDS 5888 6364 . + 0 ID=cds-WP_015729576.1;Parent=gene-CYJ01_RS07675;Dbxref=GenBank:WP_015729576.1;Name=WP_015729576.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729576.1;locus_tag=CYJ01_RS07675;product=thioesterase family protein;protein_id=WP_015729576.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 6423 7409 . - . ID=gene-CYJ01_RS07680;Name=CYJ01_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07680;old_locus_tag=CYJ01_07680 NZ_PJUR01000017.1 Protein Homology CDS 6423 7409 . - 0 ID=cds-WP_225550179.1;Parent=gene-CYJ01_RS07680;Dbxref=GenBank:WP_225550179.1;Name=WP_225550179.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=CYJ01_RS07680;product=PTS sugar transporter subunit IIC;protein_id=WP_225550179.1;transl_table=11 NZ_PJUR01000017.1 RefSeq pseudogene 7372 7455 . + . ID=gene-CYJ01_RS12280;Name=CYJ01_RS12280;end_range=7455,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12280;partial=true;pseudo=true NZ_PJUR01000017.1 Protein Homology CDS 7372 7455 . + 0 ID=cds-CYJ01_RS12280;Parent=gene-CYJ01_RS12280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7455,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=CYJ01_RS12280;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 8030 8932 . - . ID=gene-CYJ01_RS07685;Name=CYJ01_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07685;old_locus_tag=CYJ01_07685 NZ_PJUR01000017.1 Protein Homology CDS 8030 8932 . - 0 ID=cds-WP_014613102.1;Parent=gene-CYJ01_RS07685;Dbxref=GenBank:WP_014613102.1;Name=WP_014613102.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613102.1;locus_tag=CYJ01_RS07685;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_014613102.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 9055 9390 . - . ID=gene-CYJ01_RS07690;Name=CYJ01_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07690;old_locus_tag=CYJ01_07690 NZ_PJUR01000017.1 Protein Homology CDS 9055 9390 . - 0 ID=cds-WP_101457426.1;Parent=gene-CYJ01_RS07690;Dbxref=GenBank:WP_101457426.1;Name=WP_101457426.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613101.1;locus_tag=CYJ01_RS07690;product=thioredoxin family protein;protein_id=WP_101457426.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 9551 10183 . + . ID=gene-CYJ01_RS07695;Name=CYJ01_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07695;old_locus_tag=CYJ01_07695 NZ_PJUR01000017.1 Protein Homology CDS 9551 10183 . + 0 ID=cds-WP_101431540.1;Parent=gene-CYJ01_RS07695;Dbxref=GenBank:WP_101431540.1;Name=WP_101431540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729578.1;locus_tag=CYJ01_RS07695;product=hypothetical protein;protein_id=WP_101431540.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 10309 10983 . - . ID=gene-CYJ01_RS07700;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07700;old_locus_tag=CYJ01_07700 NZ_PJUR01000017.1 Protein Homology CDS 10309 10983 . - 0 ID=cds-WP_031253764.1;Parent=gene-CYJ01_RS07700;Dbxref=GenBank:WP_031253764.1;Name=WP_031253764.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613099.1;locus_tag=CYJ01_RS07700;product=thiaminase II;protein_id=WP_031253764.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 11077 11619 . - . ID=gene-CYJ01_RS07705;Name=CYJ01_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07705;old_locus_tag=CYJ01_07705 NZ_PJUR01000017.1 Protein Homology CDS 11077 11619 . - 0 ID=cds-WP_037544134.1;Parent=gene-CYJ01_RS07705;Dbxref=GenBank:WP_037544134.1;Name=WP_037544134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613098.1;locus_tag=CYJ01_RS07705;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037544134.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 12097 13491 . - . ID=gene-CYJ01_RS07710;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07710;old_locus_tag=CYJ01_07710 NZ_PJUR01000017.1 Protein Homology CDS 12097 13491 . - 0 ID=cds-WP_101457427.1;Parent=gene-CYJ01_RS07710;Dbxref=GenBank:WP_101457427.1;Name=WP_101457427.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=CYJ01_RS07710;product=membrane-associated protein TcaA;protein_id=WP_101457427.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 13598 14062 . - . ID=gene-CYJ01_RS07715;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=CYJ01_RS07715;old_locus_tag=CYJ01_07715 NZ_PJUR01000017.1 Protein Homology CDS 13598 14062 . - 0 ID=cds-WP_014613096.1;Parent=gene-CYJ01_RS07715;Dbxref=GenBank:WP_014613096.1;Name=WP_014613096.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169579.1;locus_tag=CYJ01_RS07715;product=MarR family transcriptional regulator TcaR;protein_id=WP_014613096.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 14320 15156 . + . ID=gene-CYJ01_RS07720;Name=CYJ01_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07720;old_locus_tag=CYJ01_07720 NZ_PJUR01000017.1 Protein Homology CDS 14320 15156 . + 0 ID=cds-WP_099991874.1;Parent=gene-CYJ01_RS07720;Dbxref=GenBank:WP_099991874.1;Name=WP_099991874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613095.1;locus_tag=CYJ01_RS07720;product=YdcF family protein;protein_id=WP_099991874.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 15287 15550 . + . ID=gene-CYJ01_RS11955;Name=CYJ01_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11955 NZ_PJUR01000017.1 Protein Homology CDS 15287 15550 . + 0 ID=cds-WP_110144909.1;Parent=gene-CYJ01_RS11955;Dbxref=GenBank:WP_110144909.1;Name=WP_110144909.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: protein motif:HMM:NF015746.7;locus_tag=CYJ01_RS11955;product=AbgT family transporter;protein_id=WP_110144909.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 15593 16282 . - . ID=gene-CYJ01_RS07730;Name=CYJ01_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07730;old_locus_tag=CYJ01_07730 NZ_PJUR01000017.1 Protein Homology CDS 15593 16282 . - 0 ID=cds-WP_101457428.1;Parent=gene-CYJ01_RS07730;Dbxref=GenBank:WP_101457428.1;Name=WP_101457428.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165509.1;locus_tag=CYJ01_RS07730;product=ABC transporter ATP-binding protein;protein_id=WP_101457428.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 16279 17343 . - . ID=gene-CYJ01_RS07735;Name=CYJ01_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07735;old_locus_tag=CYJ01_07735 NZ_PJUR01000017.1 Protein Homology CDS 16279 17343 . - 0 ID=cds-WP_099997363.1;Parent=gene-CYJ01_RS07735;Dbxref=GenBank:WP_099997363.1;Name=WP_099997363.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613092.1;locus_tag=CYJ01_RS07735;product=ABC transporter permease;protein_id=WP_099997363.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 18182 18859 . + . ID=gene-CYJ01_RS07740;Name=CYJ01_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07740;old_locus_tag=CYJ01_07740 NZ_PJUR01000017.1 Protein Homology CDS 18182 18859 . + 0 ID=cds-WP_101457429.1;Parent=gene-CYJ01_RS07740;Dbxref=GenBank:WP_101457429.1;Name=WP_101457429.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=CYJ01_RS07740;product=response regulator transcription factor;protein_id=WP_101457429.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 18852 20243 . + . ID=gene-CYJ01_RS07745;Name=CYJ01_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07745;old_locus_tag=CYJ01_07745 NZ_PJUR01000017.1 Protein Homology CDS 18852 20243 . + 0 ID=cds-WP_096548310.1;Parent=gene-CYJ01_RS07745;Dbxref=GenBank:WP_096548310.1;Name=WP_096548310.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219799.1;locus_tag=CYJ01_RS07745;product=sensor histidine kinase;protein_id=WP_096548310.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 20595 22100 . - . ID=gene-CYJ01_RS07750;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CYJ01_RS07750;old_locus_tag=CYJ01_07750 NZ_PJUR01000017.1 Protein Homology CDS 20595 22100 . - 0 ID=cds-WP_014613089.1;Parent=gene-CYJ01_RS07750;Dbxref=GenBank:WP_014613089.1;Name=WP_014613089.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=CYJ01_RS07750;product=malate dehydrogenase (quinone);protein_id=WP_014613089.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 22527 23702 . + . ID=gene-CYJ01_RS07755;Name=CYJ01_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07755;old_locus_tag=CYJ01_07755 NZ_PJUR01000017.1 Protein Homology CDS 22527 23702 . + 0 ID=cds-WP_014613088.1;Parent=gene-CYJ01_RS07755;Dbxref=GenBank:WP_014613088.1;Name=WP_014613088.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=CYJ01_RS07755;product=glycosyltransferase family 4 protein;protein_id=WP_014613088.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 24170 25774 . - . ID=gene-CYJ01_RS07760;Name=CYJ01_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07760;old_locus_tag=CYJ01_07760 NZ_PJUR01000017.1 Protein Homology CDS 24170 25774 . - 0 ID=cds-WP_063278990.1;Parent=gene-CYJ01_RS07760;Dbxref=GenBank:WP_063278990.1;Name=WP_063278990.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165503.1;locus_tag=CYJ01_RS07760;product=L-lactate permease;protein_id=WP_063278990.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 26228 26932 . - . ID=gene-CYJ01_RS07765;Name=CYJ01_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07765;old_locus_tag=CYJ01_07765 NZ_PJUR01000017.1 Protein Homology CDS 26228 26932 . - 0 ID=cds-WP_020219801.1;Parent=gene-CYJ01_RS07765;Dbxref=GenBank:WP_020219801.1;Name=WP_020219801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=CYJ01_RS07765;product=hypothetical protein;protein_id=WP_020219801.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 27037 27555 . - . ID=gene-CYJ01_RS07770;Name=CYJ01_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07770;old_locus_tag=CYJ01_07770 NZ_PJUR01000017.1 Protein Homology CDS 27037 27555 . - 0 ID=cds-WP_014613084.1;Parent=gene-CYJ01_RS07770;Dbxref=GenBank:WP_014613084.1;Name=WP_014613084.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729588.1;locus_tag=CYJ01_RS07770;product=GNAT family N-acetyltransferase;protein_id=WP_014613084.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 27687 28682 . + . ID=gene-CYJ01_RS07775;Name=CYJ01_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07775;old_locus_tag=CYJ01_07775 NZ_PJUR01000017.1 Protein Homology CDS 27687 28682 . + 0 ID=cds-WP_015729589.1;Parent=gene-CYJ01_RS07775;Dbxref=GenBank:WP_015729589.1;Name=WP_015729589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=CYJ01_RS07775;product=oxidoreductase;protein_id=WP_015729589.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 28919 30262 . + . ID=gene-CYJ01_RS07780;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=CYJ01_RS07780;old_locus_tag=CYJ01_07780 NZ_PJUR01000017.1 Protein Homology CDS 28919 30262 . + 0 ID=cds-WP_014613082.1;Parent=gene-CYJ01_RS07780;Dbxref=GenBank:WP_014613082.1;Name=WP_014613082.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=CYJ01_RS07780;product=glucose transporter GlcP;protein_id=WP_014613082.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 30449 31477 . + . ID=gene-CYJ01_RS07785;Name=CYJ01_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07785;old_locus_tag=CYJ01_07785 NZ_PJUR01000017.1 Protein Homology CDS 30449 31477 . + 0 ID=cds-WP_101457430.1;Parent=gene-CYJ01_RS07785;Dbxref=GenBank:WP_101457430.1;Name=WP_101457430.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165498.1;locus_tag=CYJ01_RS07785;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101457430.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 31498 31914 . + . ID=gene-CYJ01_RS07790;Name=CYJ01_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07790;old_locus_tag=CYJ01_07790 NZ_PJUR01000017.1 Protein Homology CDS 31498 31914 . + 0 ID=cds-WP_014613080.1;Parent=gene-CYJ01_RS07790;Dbxref=GenBank:WP_014613080.1;Name=WP_014613080.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729591.1;locus_tag=CYJ01_RS07790;product=GNAT family N-acetyltransferase;protein_id=WP_014613080.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 31991 32449 . - . ID=gene-CYJ01_RS07795;Name=CYJ01_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07795;old_locus_tag=CYJ01_07795 NZ_PJUR01000017.1 Protein Homology CDS 31991 32449 . - 0 ID=cds-WP_014613078.1;Parent=gene-CYJ01_RS07795;Dbxref=GenBank:WP_014613078.1;Name=WP_014613078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165496.1;locus_tag=CYJ01_RS07795;product=DUF2871 domain-containing protein;protein_id=WP_014613078.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 32657 32860 . - . ID=gene-CYJ01_RS07800;Name=CYJ01_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07800;old_locus_tag=CYJ01_07800 NZ_PJUR01000017.1 Protein Homology CDS 32657 32860 . - 0 ID=cds-WP_101457431.1;Parent=gene-CYJ01_RS07800;Dbxref=GenBank:WP_101457431.1;Name=WP_101457431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219804.1;locus_tag=CYJ01_RS07800;product=hypothetical protein;protein_id=WP_101457431.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 33163 34818 . - . ID=gene-CYJ01_RS07805;Name=CYJ01_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07805;old_locus_tag=CYJ01_07805 NZ_PJUR01000017.1 Protein Homology CDS 33163 34818 . - 0 ID=cds-WP_096533529.1;Parent=gene-CYJ01_RS07805;Dbxref=GenBank:WP_096533529.1;Name=WP_096533529.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385453.1;locus_tag=CYJ01_RS07805;product=Na/Pi cotransporter family protein;protein_id=WP_096533529.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 35229 35693 . + . ID=gene-CYJ01_RS07810;Name=CYJ01_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07810;old_locus_tag=CYJ01_07810 NZ_PJUR01000017.1 Protein Homology CDS 35229 35693 . + 0 ID=cds-WP_014613075.1;Parent=gene-CYJ01_RS07810;Dbxref=GenBank:WP_014613075.1;Name=WP_014613075.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=CYJ01_RS07810;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613075.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 35690 36628 . + . ID=gene-CYJ01_RS07815;Name=CYJ01_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07815;old_locus_tag=CYJ01_07815 NZ_PJUR01000017.1 Protein Homology CDS 35690 36628 . + 0 ID=cds-WP_101457432.1;Parent=gene-CYJ01_RS07815;Dbxref=GenBank:WP_101457432.1;Name=WP_101457432.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=CYJ01_RS07815;product=magnesium transporter CorA family protein;protein_id=WP_101457432.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 37326 38765 . - . ID=gene-CYJ01_RS07820;Name=CYJ01_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07820;old_locus_tag=CYJ01_07820 NZ_PJUR01000017.1 Protein Homology CDS 37326 38765 . - 0 ID=cds-WP_101457433.1;Parent=gene-CYJ01_RS07820;Dbxref=GenBank:WP_101457433.1;Name=WP_101457433.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166076.1;locus_tag=CYJ01_RS07820;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_101457433.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 39339 41432 . + . ID=gene-CYJ01_RS07825;Name=CYJ01_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07825;old_locus_tag=CYJ01_07825 NZ_PJUR01000017.1 Protein Homology CDS 39339 41432 . + 0 ID=cds-WP_015729596.1;Parent=gene-CYJ01_RS07825;Dbxref=GenBank:WP_015729596.1;Name=WP_015729596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613072.1;locus_tag=CYJ01_RS07825;product=helix-turn-helix domain-containing protein;protein_id=WP_015729596.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 41518 42711 . - . ID=gene-CYJ01_RS07830;Name=CYJ01_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07830;old_locus_tag=CYJ01_07830 NZ_PJUR01000017.1 Protein Homology CDS 41518 42711 . - 0 ID=cds-WP_014613071.1;Parent=gene-CYJ01_RS07830;Dbxref=GenBank:WP_014613071.1;Name=WP_014613071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=CYJ01_RS07830;product=CynX/NimT family MFS transporter;protein_id=WP_014613071.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 42995 43330 . + . ID=gene-CYJ01_RS07835;Name=CYJ01_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07835;old_locus_tag=CYJ01_07835 NZ_PJUR01000017.1 Protein Homology CDS 42995 43330 . + 0 ID=cds-WP_014613070.1;Parent=gene-CYJ01_RS07835;Dbxref=GenBank:WP_014613070.1;Name=WP_014613070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613070.1;locus_tag=CYJ01_RS07835;product=DUF4889 domain-containing protein;protein_id=WP_014613070.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 43827 44732 . - . ID=gene-CYJ01_RS07840;Name=CYJ01_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07840;old_locus_tag=CYJ01_07840 NZ_PJUR01000017.1 Protein Homology CDS 43827 44732 . - 0 ID=cds-WP_014613069.1;Parent=gene-CYJ01_RS07840;Dbxref=GenBank:WP_014613069.1;Name=WP_014613069.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613069.1;locus_tag=CYJ01_RS07840;product=DMT family transporter;protein_id=WP_014613069.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 44904 45977 . - . ID=gene-CYJ01_RS07845;Name=CYJ01_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07845;old_locus_tag=CYJ01_07845 NZ_PJUR01000017.1 Protein Homology CDS 44904 45977 . - 0 ID=cds-WP_014613068.1;Parent=gene-CYJ01_RS07845;Dbxref=GenBank:WP_014613068.1;Name=WP_014613068.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=CYJ01_RS07845;product=M42 family metallopeptidase;protein_id=WP_014613068.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 46158 47105 . + . ID=gene-CYJ01_RS07850;Name=CYJ01_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07850;old_locus_tag=CYJ01_07850 NZ_PJUR01000017.1 Protein Homology CDS 46158 47105 . + 0 ID=cds-WP_014613067.1;Parent=gene-CYJ01_RS07850;Dbxref=GenBank:WP_014613067.1;Name=WP_014613067.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613067.1;locus_tag=CYJ01_RS07850;product=lactate/malate family dehydrogenase;protein_id=WP_014613067.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 47273 47629 . - . ID=gene-CYJ01_RS07855;Name=CYJ01_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07855;old_locus_tag=CYJ01_07855 NZ_PJUR01000017.1 Protein Homology CDS 47273 47629 . - 0 ID=cds-WP_014613066.1;Parent=gene-CYJ01_RS07855;Dbxref=GenBank:WP_014613066.1;Name=WP_014613066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=CYJ01_RS07855;product=DUF3139 domain-containing protein;protein_id=WP_014613066.1;transl_table=11 NZ_PJUR01000017.1 RefSeq gene 47813 49411 . + . ID=gene-CYJ01_RS07860;Name=CYJ01_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07860;old_locus_tag=CYJ01_07860 NZ_PJUR01000017.1 Protein Homology CDS 47813 49411 . + 0 ID=cds-WP_101431552.1;Parent=gene-CYJ01_RS07860;Dbxref=GenBank:WP_101431552.1;Name=WP_101431552.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729598.1;locus_tag=CYJ01_RS07860;product=M20 family metallopeptidase;protein_id=WP_101431552.1;transl_table=11 ##sequence-region NZ_PJUR01000018.1 1 57825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000018.1 RefSeq region 1 57825 . + . ID=NZ_PJUR01000018.1:1..57825;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000018.1 RefSeq gene 425 622 . - . ID=gene-CYJ01_RS07865;Name=CYJ01_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07865;old_locus_tag=CYJ01_07865 NZ_PJUR01000018.1 Protein Homology CDS 425 622 . - 0 ID=cds-WP_014614007.1;Parent=gene-CYJ01_RS07865;Dbxref=GenBank:WP_014614007.1;Name=WP_014614007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=CYJ01_RS07865;product=hypothetical protein;protein_id=WP_014614007.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 762 1268 . + . ID=gene-CYJ01_RS07870;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=CYJ01_RS07870;old_locus_tag=CYJ01_07870 NZ_PJUR01000018.1 Protein Homology CDS 762 1268 . + 0 ID=cds-WP_037543104.1;Parent=gene-CYJ01_RS07870;Dbxref=GenBank:WP_037543104.1;Name=WP_037543104.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=CYJ01_RS07870;product=thermonuclease NucI;protein_id=WP_037543104.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 1332 2201 . - . ID=gene-CYJ01_RS07875;Name=CYJ01_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07875;old_locus_tag=CYJ01_07875 NZ_PJUR01000018.1 Protein Homology CDS 1332 2201 . - 0 ID=cds-WP_101457434.1;Parent=gene-CYJ01_RS07875;Dbxref=GenBank:WP_101457434.1;Name=WP_101457434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614005.1;locus_tag=CYJ01_RS07875;product=hypothetical protein;protein_id=WP_101457434.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 2630 2992 . - . ID=gene-CYJ01_RS07880;Name=CYJ01_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07880;old_locus_tag=CYJ01_07880 NZ_PJUR01000018.1 Protein Homology CDS 2630 2992 . - 0 ID=cds-WP_014614004.1;Parent=gene-CYJ01_RS07880;Dbxref=GenBank:WP_014614004.1;Name=WP_014614004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167762.1;locus_tag=CYJ01_RS07880;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014614004.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 3508 4095 . + . ID=gene-CYJ01_RS07885;Name=CYJ01_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07885;old_locus_tag=CYJ01_07885 NZ_PJUR01000018.1 Protein Homology CDS 3508 4095 . + 0 ID=cds-WP_015729077.1;Parent=gene-CYJ01_RS07885;Dbxref=GenBank:WP_015729077.1;Name=WP_015729077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165399.1;locus_tag=CYJ01_RS07885;product=hypothetical protein;protein_id=WP_015729077.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 4139 5491 . - . ID=gene-CYJ01_RS07890;Name=CYJ01_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07890;old_locus_tag=CYJ01_07890 NZ_PJUR01000018.1 Protein Homology CDS 4139 5491 . - 0 ID=cds-WP_014614001.1;Parent=gene-CYJ01_RS07890;Dbxref=GenBank:WP_014614001.1;Name=WP_014614001.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729078.1;locus_tag=CYJ01_RS07890;product=aspartate kinase;protein_id=WP_014614001.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 5683 6966 . + . ID=gene-CYJ01_RS07895;Name=CYJ01_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07895;old_locus_tag=CYJ01_07895 NZ_PJUR01000018.1 Protein Homology CDS 5683 6966 . + 0 ID=cds-WP_014614000.1;Parent=gene-CYJ01_RS07895;Dbxref=GenBank:WP_014614000.1;Name=WP_014614000.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457511.1;locus_tag=CYJ01_RS07895;product=homoserine dehydrogenase;protein_id=WP_014614000.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 6972 8036 . + . ID=gene-CYJ01_RS07900;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CYJ01_RS07900;old_locus_tag=CYJ01_07900 NZ_PJUR01000018.1 Protein Homology CDS 6972 8036 . + 0 ID=cds-WP_014613999.1;Parent=gene-CYJ01_RS07900;Dbxref=GenBank:WP_014613999.1;Name=WP_014613999.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=CYJ01_RS07900;product=threonine synthase;protein_id=WP_014613999.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 8036 8953 . + . ID=gene-CYJ01_RS07905;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CYJ01_RS07905;old_locus_tag=CYJ01_07905 NZ_PJUR01000018.1 Protein Homology CDS 8036 8953 . + 0 ID=cds-WP_181137791.1;Parent=gene-CYJ01_RS07905;Dbxref=GenBank:WP_181137791.1;Name=WP_181137791.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511052.1;locus_tag=CYJ01_RS07905;product=homoserine kinase;protein_id=WP_181137791.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 9140 9943 . + . ID=gene-CYJ01_RS07910;Name=CYJ01_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07910;old_locus_tag=CYJ01_07910 NZ_PJUR01000018.1 Protein Homology CDS 9140 9943 . + 0 ID=cds-WP_014613997.1;Parent=gene-CYJ01_RS07910;Dbxref=GenBank:WP_014613997.1;Name=WP_014613997.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=CYJ01_RS07910;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014613997.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 10097 10411 . - . ID=gene-CYJ01_RS07915;Name=CYJ01_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07915;old_locus_tag=CYJ01_07915 NZ_PJUR01000018.1 Protein Homology CDS 10097 10411 . - 0 ID=cds-WP_014613996.1;Parent=gene-CYJ01_RS07915;Dbxref=GenBank:WP_014613996.1;Name=WP_014613996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=CYJ01_RS07915;product=hypothetical protein;protein_id=WP_014613996.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 10585 12036 . - . ID=gene-CYJ01_RS07920;Name=CYJ01_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07920;old_locus_tag=CYJ01_07920 NZ_PJUR01000018.1 Protein Homology CDS 10585 12036 . - 0 ID=cds-WP_014613995.1;Parent=gene-CYJ01_RS07920;Dbxref=GenBank:WP_014613995.1;Name=WP_014613995.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167754.1;locus_tag=CYJ01_RS07920;product=amino acid permease;protein_id=WP_014613995.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 12390 12539 . - . ID=gene-CYJ01_RS07925;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ01_RS07925;old_locus_tag=CYJ01_07925 NZ_PJUR01000018.1 Protein Homology CDS 12390 12539 . - 0 ID=cds-WP_014613994.1;Parent=gene-CYJ01_RS07925;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ01_RS07925;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 12711 12980 . + . ID=gene-CYJ01_RS07930;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CYJ01_RS07930;old_locus_tag=CYJ01_07930 NZ_PJUR01000018.1 Protein Homology CDS 12711 12980 . + 0 ID=cds-WP_014613993.1;Parent=gene-CYJ01_RS07930;Dbxref=GenBank:WP_014613993.1;Name=WP_014613993.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CYJ01_RS07930;product=30S ribosomal protein S14;protein_id=WP_014613993.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 13061 14038 . + . ID=gene-CYJ01_RS07935;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CYJ01_RS07935;old_locus_tag=CYJ01_07935 NZ_PJUR01000018.1 Protein Homology CDS 13061 14038 . + 0 ID=cds-WP_101431600.1;Parent=gene-CYJ01_RS07935;Dbxref=GenBank:WP_101431600.1;Name=WP_101431600.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=CYJ01_RS07935;product=GMP reductase;protein_id=WP_101431600.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 14044 15060 . + . ID=gene-CYJ01_RS07940;Name=CYJ01_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07940;old_locus_tag=CYJ01_07940 NZ_PJUR01000018.1 Protein Homology CDS 14044 15060 . + 0 ID=cds-WP_181137790.1;Parent=gene-CYJ01_RS07940;Dbxref=GenBank:WP_181137790.1;Name=WP_181137790.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275860.1;locus_tag=CYJ01_RS07940;product=CAP domain-containing protein;protein_id=WP_181137790.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 15273 15896 . - . ID=gene-CYJ01_RS07945;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07945;old_locus_tag=CYJ01_07945 NZ_PJUR01000018.1 Protein Homology CDS 15273 15896 . - 0 ID=cds-WP_014613990.1;Parent=gene-CYJ01_RS07945;Dbxref=GenBank:WP_014613990.1;Name=WP_014613990.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CYJ01_RS07945;product=transcriptional repressor LexA;protein_id=WP_014613990.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 16041 16274 . + . ID=gene-CYJ01_RS07950;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07950;old_locus_tag=CYJ01_07950 NZ_PJUR01000018.1 Protein Homology CDS 16041 16274 . + 0 ID=cds-WP_101457436.1;Parent=gene-CYJ01_RS07950;Dbxref=GenBank:WP_101457436.1;Name=WP_101457436.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=CYJ01_RS07950;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_101457436.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 16541 16777 . + . ID=gene-CYJ01_RS07955;Name=CYJ01_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07955;old_locus_tag=CYJ01_07955 NZ_PJUR01000018.1 Protein Homology CDS 16541 16777 . + 0 ID=cds-WP_014613988.1;Parent=gene-CYJ01_RS07955;Dbxref=GenBank:WP_014613988.1;Name=WP_014613988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613988.1;locus_tag=CYJ01_RS07955;product=DUF896 domain-containing protein;protein_id=WP_014613988.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 16882 18867 . + . ID=gene-CYJ01_RS07960;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CYJ01_RS07960;old_locus_tag=CYJ01_07960 NZ_PJUR01000018.1 Protein Homology CDS 16882 18867 . + 0 ID=cds-WP_014613987.1;Parent=gene-CYJ01_RS07960;Dbxref=GenBank:WP_014613987.1;Name=WP_014613987.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613987.1;locus_tag=CYJ01_RS07960;product=transketolase;protein_id=WP_014613987.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 19025 19252 . + . ID=gene-CYJ01_RS07965;Name=CYJ01_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07965;old_locus_tag=CYJ01_07965 NZ_PJUR01000018.1 Protein Homology CDS 19025 19252 . + 0 ID=cds-WP_014613986.1;Parent=gene-CYJ01_RS07965;Dbxref=GenBank:WP_014613986.1;Name=WP_014613986.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=CYJ01_RS07965;product=YneF family protein;protein_id=WP_014613986.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 19500 19967 . + . ID=gene-CYJ01_RS07970;Name=CYJ01_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07970;old_locus_tag=CYJ01_07970 NZ_PJUR01000018.1 Protein Homology CDS 19500 19967 . + 0 ID=cds-WP_014613985.1;Parent=gene-CYJ01_RS07970;Dbxref=GenBank:WP_014613985.1;Name=WP_014613985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613985.1;locus_tag=CYJ01_RS07970;product=CcdC family protein;protein_id=WP_014613985.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 20120 21247 . + . ID=gene-CYJ01_RS07975;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CYJ01_RS07975;old_locus_tag=CYJ01_07975 NZ_PJUR01000018.1 Protein Homology CDS 20120 21247 . + 0 ID=cds-WP_241900535.1;Parent=gene-CYJ01_RS07975;Dbxref=GenBank:WP_241900535.1;Name=WP_241900535.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=CYJ01_RS07975;product=exonuclease subunit SbcD;protein_id=WP_241900535.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 21250 24282 . + . ID=gene-CYJ01_RS07980;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CYJ01_RS07980;old_locus_tag=CYJ01_07980 NZ_PJUR01000018.1 Protein Homology CDS 21250 24282 . + 0 ID=cds-WP_101457437.1;Parent=gene-CYJ01_RS07980;Dbxref=GenBank:WP_101457437.1;Name=WP_101457437.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=CYJ01_RS07980;product=exonuclease subunit SbcC;protein_id=WP_101457437.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 24511 24870 . - . ID=gene-CYJ01_RS07985;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CYJ01_RS07985;old_locus_tag=CYJ01_07985 NZ_PJUR01000018.1 Protein Homology CDS 24511 24870 . - 0 ID=cds-WP_014613981.1;Parent=gene-CYJ01_RS07985;Dbxref=GenBank:WP_014613981.1;Name=WP_014613981.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166560.1;locus_tag=CYJ01_RS07985;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_014613981.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 25110 26744 . + . ID=gene-CYJ01_RS07990;Name=CYJ01_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS07990;old_locus_tag=CYJ01_07990 NZ_PJUR01000018.1 Protein Homology CDS 25110 26744 . + 0 ID=cds-WP_014613980.1;Parent=gene-CYJ01_RS07990;Dbxref=GenBank:WP_014613980.1;Name=WP_014613980.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=CYJ01_RS07990;product=BCCT family transporter;protein_id=WP_014613980.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 27043 29748 . + . ID=gene-CYJ01_RS07995;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CYJ01_RS07995;old_locus_tag=CYJ01_07995 NZ_PJUR01000018.1 Protein Homology CDS 27043 29748 . + 0 ID=cds-WP_014613979.1;Parent=gene-CYJ01_RS07995;Dbxref=GenBank:WP_014613979.1;Name=WP_014613979.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=CYJ01_RS07995;product=aconitate hydratase AcnA;protein_id=WP_014613979.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 30113 30577 . + . ID=gene-CYJ01_RS08000;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CYJ01_RS08000;old_locus_tag=CYJ01_08000 NZ_PJUR01000018.1 Protein Homology CDS 30113 30577 . + 0 ID=cds-WP_014613978.1;Parent=gene-CYJ01_RS08000;Dbxref=GenBank:WP_014613978.1;Name=WP_014613978.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613978.1;locus_tag=CYJ01_RS08000;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_014613978.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 30706 31011 . - . ID=gene-CYJ01_RS08005;Name=CYJ01_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08005;old_locus_tag=CYJ01_08005 NZ_PJUR01000018.1 Protein Homology CDS 30706 31011 . - 0 ID=cds-WP_015729090.1;Parent=gene-CYJ01_RS08005;Dbxref=GenBank:WP_015729090.1;Name=WP_015729090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613977.1;locus_tag=CYJ01_RS08005;product=HesB/YadR/YfhF family protein;protein_id=WP_015729090.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 31094 31675 . - . ID=gene-CYJ01_RS08010;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CYJ01_RS08010;old_locus_tag=CYJ01_08010 NZ_PJUR01000018.1 Protein Homology CDS 31094 31675 . - 0 ID=cds-WP_014613976.1;Parent=gene-CYJ01_RS08010;Dbxref=GenBank:WP_014613976.1;Name=WP_014613976.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167738.1;locus_tag=CYJ01_RS08010;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_014613976.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 31966 33963 . + . ID=gene-CYJ01_RS08015;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CYJ01_RS08015;old_locus_tag=CYJ01_08015 NZ_PJUR01000018.1 Protein Homology CDS 31966 33963 . + 0 ID=cds-WP_101457438.1;Parent=gene-CYJ01_RS08015;Dbxref=GenBank:WP_101457438.1;Name=WP_101457438.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=CYJ01_RS08015;product=DNA topoisomerase IV subunit B;protein_id=WP_101457438.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 33963 36374 . + . ID=gene-CYJ01_RS08020;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08020;old_locus_tag=CYJ01_08020 NZ_PJUR01000018.1 Protein Homology CDS 33963 36374 . + 0 ID=cds-WP_101457439.1;Parent=gene-CYJ01_RS08020;Dbxref=GenBank:WP_101457439.1;Name=WP_101457439.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=CYJ01_RS08020;product=DNA topoisomerase IV subunit A;protein_id=WP_101457439.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 36477 37940 . + . ID=gene-CYJ01_RS08025;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=CYJ01_RS08025;old_locus_tag=CYJ01_08025 NZ_PJUR01000018.1 Protein Homology CDS 36477 37940 . + 0 ID=cds-WP_014613973.1;Parent=gene-CYJ01_RS08025;Dbxref=GenBank:WP_014613973.1;Name=WP_014613973.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166553.1;locus_tag=CYJ01_RS08025;product=glutamine transporter AlsT;protein_id=WP_014613973.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 38136 38987 . + . ID=gene-CYJ01_RS08030;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=CYJ01_RS08030;old_locus_tag=CYJ01_08030 NZ_PJUR01000018.1 Protein Homology CDS 38136 38987 . + 0 ID=cds-WP_101431605.1;Parent=gene-CYJ01_RS08030;Dbxref=GenBank:WP_101431605.1;Name=WP_101431605.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=CYJ01_RS08030;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_101431605.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 39098 41137 . + . ID=gene-CYJ01_RS08035;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ01_RS08035;old_locus_tag=CYJ01_08035 NZ_PJUR01000018.1 Protein Homology CDS 39098 41137 . + 0 ID=cds-WP_037543085.1;Parent=gene-CYJ01_RS08035;Dbxref=GenBank:WP_037543085.1;Name=WP_037543085.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166551.1;locus_tag=CYJ01_RS08035;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_037543085.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 41410 42612 . + . ID=gene-CYJ01_RS08040;Name=CYJ01_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08040;old_locus_tag=CYJ01_08040 NZ_PJUR01000018.1 Protein Homology CDS 41410 42612 . + 0 ID=cds-WP_015729093.1;Parent=gene-CYJ01_RS08040;Dbxref=GenBank:WP_015729093.1;Name=WP_015729093.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729093.1;locus_tag=CYJ01_RS08040;product=AI-2E family transporter;protein_id=WP_015729093.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 42710 45229 . + . ID=gene-CYJ01_RS08045;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=CYJ01_RS08045;old_locus_tag=CYJ01_08045 NZ_PJUR01000018.1 Protein Homology CDS 42710 45229 . + 0 ID=cds-WP_101457440.1;Parent=gene-CYJ01_RS08045;Dbxref=GenBank:WP_101457440.1;Name=WP_101457440.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729094.1;locus_tag=CYJ01_RS08045;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_101457440.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 45476 45994 . - . ID=gene-CYJ01_RS08050;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08050;old_locus_tag=CYJ01_08050 NZ_PJUR01000018.1 Protein Homology CDS 45476 45994 . - 0 ID=cds-WP_014613968.1;Parent=gene-CYJ01_RS08050;Dbxref=GenBank:WP_014613968.1;Name=WP_014613968.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613968.1;locus_tag=CYJ01_RS08050;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014613968.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 46133 47104 . + . ID=gene-CYJ01_RS08055;Name=CYJ01_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08055;old_locus_tag=CYJ01_08055 NZ_PJUR01000018.1 Protein Homology CDS 46133 47104 . + 0 ID=cds-WP_014613967.1;Parent=gene-CYJ01_RS08055;Dbxref=GenBank:WP_014613967.1;Name=WP_014613967.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219592.1;locus_tag=CYJ01_RS08055;product=LCP family protein;protein_id=WP_014613967.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 47160 47345 . - . ID=gene-CYJ01_RS08060;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=CYJ01_RS08060;old_locus_tag=CYJ01_08060 NZ_PJUR01000018.1 Protein Homology CDS 47160 47345 . - 0 ID=cds-WP_015729095.1;Parent=gene-CYJ01_RS08060;Dbxref=GenBank:WP_015729095.1;Name=WP_015729095.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CYJ01_RS08060;product=2-hydroxymuconate tautomerase;protein_id=WP_015729095.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 47457 47864 . + . ID=gene-CYJ01_RS08065;Name=CYJ01_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08065;old_locus_tag=CYJ01_08065 NZ_PJUR01000018.1 Protein Homology CDS 47457 47864 . + 0 ID=cds-WP_014613965.1;Parent=gene-CYJ01_RS08065;Dbxref=GenBank:WP_014613965.1;Name=WP_014613965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=CYJ01_RS08065;product=sporulation protein;protein_id=WP_014613965.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 48016 49278 . + . ID=gene-CYJ01_RS08070;Name=CYJ01_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08070;old_locus_tag=CYJ01_08070 NZ_PJUR01000018.1 Protein Homology CDS 48016 49278 . + 0 ID=cds-WP_101457441.1;Parent=gene-CYJ01_RS08070;Dbxref=GenBank:WP_101457441.1;Name=WP_101457441.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=CYJ01_RS08070;product=Y-family DNA polymerase;protein_id=WP_101457441.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 49358 50449 . - . ID=gene-CYJ01_RS08075;Name=CYJ01_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08075;old_locus_tag=CYJ01_08075 NZ_PJUR01000018.1 Protein Homology CDS 49358 50449 . - 0 ID=cds-WP_101457442.1;Parent=gene-CYJ01_RS08075;Dbxref=GenBank:WP_101457442.1;Name=WP_101457442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=CYJ01_RS08075;product=prephenate dehydrogenase;protein_id=WP_101457442.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 50592 51572 . + . ID=gene-CYJ01_RS08080;Name=CYJ01_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08080;old_locus_tag=CYJ01_08080 NZ_PJUR01000018.1 Protein Homology CDS 50592 51572 . + 0 ID=cds-WP_101457443.1;Parent=gene-CYJ01_RS08080;Dbxref=GenBank:WP_101457443.1;Name=WP_101457443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219594.1;locus_tag=CYJ01_RS08080;product=M42 family metallopeptidase;protein_id=WP_101457443.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 51747 53012 . + . ID=gene-CYJ01_RS08085;Name=CYJ01_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08085;old_locus_tag=CYJ01_08085 NZ_PJUR01000018.1 Protein Homology CDS 51747 53012 . + 0 ID=cds-WP_014613961.1;Parent=gene-CYJ01_RS08085;Dbxref=GenBank:WP_014613961.1;Name=WP_014613961.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613961.1;locus_tag=CYJ01_RS08085;product=aminoacyltransferase;protein_id=WP_014613961.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 53042 54301 . + . ID=gene-CYJ01_RS08090;Name=CYJ01_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08090;old_locus_tag=CYJ01_08090 NZ_PJUR01000018.1 Protein Homology CDS 53042 54301 . + 0 ID=cds-WP_014613960.1;Parent=gene-CYJ01_RS08090;Dbxref=GenBank:WP_014613960.1;Name=WP_014613960.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ01_RS08090;product=aminoacyltransferase;protein_id=WP_014613960.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 54892 55215 . - . ID=gene-CYJ01_RS08095;Name=CYJ01_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08095;old_locus_tag=CYJ01_08095 NZ_PJUR01000018.1 Protein Homology CDS 54892 55215 . - 0 ID=cds-WP_014613959.1;Parent=gene-CYJ01_RS08095;Dbxref=GenBank:WP_014613959.1;Name=WP_014613959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613959.1;locus_tag=CYJ01_RS08095;product=hypothetical protein;protein_id=WP_014613959.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 55347 57146 . + . ID=gene-CYJ01_RS08100;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ01_RS08100;old_locus_tag=CYJ01_08100 NZ_PJUR01000018.1 Protein Homology CDS 55347 57146 . + 0 ID=cds-WP_101457444.1;Parent=gene-CYJ01_RS08100;Dbxref=GenBank:WP_101457444.1;Name=WP_101457444.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613958.1;locus_tag=CYJ01_RS08100;product=oligoendopeptidase F;protein_id=WP_101457444.1;transl_table=11 NZ_PJUR01000018.1 RefSeq gene 57207 57825 . - . ID=gene-CYJ01_RS08105;Name=CYJ01_RS08105;end_range=57825,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08105;old_locus_tag=CYJ01_08105;partial=true NZ_PJUR01000018.1 Protein Homology CDS 57207 57825 . - 1 ID=cds-WP_133121614.1;Parent=gene-CYJ01_RS08105;Dbxref=GenBank:WP_133121614.1;Name=WP_133121614.1;Ontology_term=GO:0009986;end_range=57825,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ01_RS08105;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_133121614.1;transl_table=11 ##sequence-region NZ_PJUR01000019.1 1 44584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000019.1 RefSeq region 1 44584 . + . ID=NZ_PJUR01000019.1:1..44584;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000019.1 RefSeq gene 166 555 . - . ID=gene-CYJ01_RS08115;Name=CYJ01_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08115;old_locus_tag=CYJ01_08115 NZ_PJUR01000019.1 Protein Homology CDS 166 555 . - 0 ID=cds-WP_014614393.1;Parent=gene-CYJ01_RS08115;Dbxref=GenBank:WP_014614393.1;Name=WP_014614393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=CYJ01_RS08115;product=YisL family protein;protein_id=WP_014614393.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 891 1796 . - . ID=gene-CYJ01_RS08120;Name=CYJ01_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08120;old_locus_tag=CYJ01_08120 NZ_PJUR01000019.1 Protein Homology CDS 891 1796 . - 0 ID=cds-WP_014614394.1;Parent=gene-CYJ01_RS08120;Dbxref=GenBank:WP_014614394.1;Name=WP_014614394.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220049.1;locus_tag=CYJ01_RS08120;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014614394.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 1879 5523 . - . ID=gene-CYJ01_RS08125;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08125;old_locus_tag=CYJ01_08125 NZ_PJUR01000019.1 Protein Homology CDS 1879 5523 . - 0 ID=cds-WP_101457446.1;Parent=gene-CYJ01_RS08125;Dbxref=GenBank:WP_101457446.1;Name=WP_101457446.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168273.1;locus_tag=CYJ01_RS08125;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_101457446.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 5520 8984 . - . ID=gene-CYJ01_RS08130;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08130;old_locus_tag=CYJ01_08130 NZ_PJUR01000019.1 Protein Homology CDS 5520 8984 . - 0 ID=cds-WP_101457447.1;Parent=gene-CYJ01_RS08130;Dbxref=GenBank:WP_101457447.1;Name=WP_101457447.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=CYJ01_RS08130;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_101457447.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 9203 9781 . - . ID=gene-CYJ01_RS08135;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08135;old_locus_tag=CYJ01_08135 NZ_PJUR01000019.1 Protein Homology CDS 9203 9781 . - 0 ID=cds-WP_070407532.1;Parent=gene-CYJ01_RS08135;Dbxref=GenBank:WP_070407532.1;Name=WP_070407532.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168275.1;locus_tag=CYJ01_RS08135;product=signal peptidase I;protein_id=WP_070407532.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 9800 10318 . - . ID=gene-CYJ01_RS08140;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08140;old_locus_tag=CYJ01_08140 NZ_PJUR01000019.1 Protein Homology CDS 9800 10318 . - 0 ID=cds-WP_172425806.1;Parent=gene-CYJ01_RS08140;Dbxref=GenBank:WP_172425806.1;Name=WP_172425806.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424627.1;locus_tag=CYJ01_RS08140;product=signal peptidase I;protein_id=WP_172425806.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 10562 11893 . - . ID=gene-CYJ01_RS08145;Name=CYJ01_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08145;old_locus_tag=CYJ01_08145 NZ_PJUR01000019.1 Protein Homology CDS 10562 11893 . - 0 ID=cds-WP_014614399.1;Parent=gene-CYJ01_RS08145;Dbxref=GenBank:WP_014614399.1;Name=WP_014614399.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CYJ01_RS08145;product=glucose-6-phosphate isomerase;protein_id=WP_014614399.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 12086 13288 . + . ID=gene-CYJ01_RS08150;Name=CYJ01_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08150;old_locus_tag=CYJ01_08150 NZ_PJUR01000019.1 Protein Homology CDS 12086 13288 . + 0 ID=cds-WP_014614400.1;Parent=gene-CYJ01_RS08150;Dbxref=GenBank:WP_014614400.1;Name=WP_014614400.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614400.1;locus_tag=CYJ01_RS08150;product=argininosuccinate synthase;protein_id=WP_014614400.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 13281 14672 . + . ID=gene-CYJ01_RS08155;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CYJ01_RS08155;old_locus_tag=CYJ01_08155 NZ_PJUR01000019.1 Protein Homology CDS 13281 14672 . + 0 ID=cds-WP_101431612.1;Parent=gene-CYJ01_RS08155;Dbxref=GenBank:WP_101431612.1;Name=WP_101431612.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220051.1;locus_tag=CYJ01_RS08155;product=argininosuccinate lyase;protein_id=WP_101431612.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 14910 15845 . + . ID=gene-CYJ01_RS08160;Name=CYJ01_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08160;old_locus_tag=CYJ01_08160 NZ_PJUR01000019.1 Protein Homology CDS 14910 15845 . + 0 ID=cds-WP_014614402.1;Parent=gene-CYJ01_RS08160;Dbxref=GenBank:WP_014614402.1;Name=WP_014614402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220052.1;locus_tag=CYJ01_RS08160;product=glycerophosphodiester phosphodiesterase;protein_id=WP_014614402.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 16158 17402 . - . ID=gene-CYJ01_RS08165;Name=CYJ01_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08165;old_locus_tag=CYJ01_08165 NZ_PJUR01000019.1 Protein Homology CDS 16158 17402 . - 0 ID=cds-WP_014614403.1;Parent=gene-CYJ01_RS08165;Dbxref=GenBank:WP_014614403.1;Name=WP_014614403.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499448.1;locus_tag=CYJ01_RS08165;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_014614403.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 17510 18709 . - . ID=gene-CYJ01_RS08170;Name=CYJ01_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08170;old_locus_tag=CYJ01_08170 NZ_PJUR01000019.1 Protein Homology CDS 17510 18709 . - 0 ID=cds-WP_063284612.1;Parent=gene-CYJ01_RS08170;Dbxref=GenBank:WP_063284612.1;Name=WP_063284612.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728871.1;locus_tag=CYJ01_RS08170;product=ornithine--oxo-acid transaminase;protein_id=WP_063284612.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 18885 20429 . - . ID=gene-CYJ01_RS08175;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08175;old_locus_tag=CYJ01_08175 NZ_PJUR01000019.1 Protein Homology CDS 18885 20429 . - 0 ID=cds-WP_014614405.1;Parent=gene-CYJ01_RS08175;Dbxref=GenBank:WP_014614405.1;Name=WP_014614405.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=CYJ01_RS08175;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_014614405.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 20839 21228 . + . ID=gene-CYJ01_RS08180;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=CYJ01_RS08180;old_locus_tag=CYJ01_08180 NZ_PJUR01000019.1 Protein Homology CDS 20839 21228 . + 0 ID=cds-WP_014614406.1;Parent=gene-CYJ01_RS08180;Dbxref=GenBank:WP_014614406.1;Name=WP_014614406.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=CYJ01_RS08180;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_014614406.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 21661 21906 . - . ID=gene-CYJ01_RS08185;Name=CYJ01_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08185;old_locus_tag=CYJ01_08185 NZ_PJUR01000019.1 Protein Homology CDS 21661 21906 . - 0 ID=cds-WP_241537507.1;Parent=gene-CYJ01_RS08185;Dbxref=GenBank:WP_241537507.1;Name=WP_241537507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614407.1;locus_tag=CYJ01_RS08185;product=hypothetical protein;protein_id=WP_241537507.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 22540 22740 . + . ID=gene-CYJ01_RS08190;Name=CYJ01_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08190;old_locus_tag=CYJ01_08190 NZ_PJUR01000019.1 Protein Homology CDS 22540 22740 . + 0 ID=cds-WP_014614408.1;Parent=gene-CYJ01_RS08190;Dbxref=GenBank:WP_014614408.1;Name=WP_014614408.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=CYJ01_RS08190;product=cold-shock protein;protein_id=WP_014614408.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 22801 23067 . - . ID=gene-CYJ01_RS08195;Name=CYJ01_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08195;old_locus_tag=CYJ01_08195 NZ_PJUR01000019.1 Protein Homology CDS 22801 23067 . - 0 ID=cds-WP_101457448.1;Parent=gene-CYJ01_RS08195;Dbxref=GenBank:WP_101457448.1;Name=WP_101457448.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=CYJ01_RS08195;product=FmdB family zinc ribbon protein;protein_id=WP_101457448.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 23067 24257 . - . ID=gene-CYJ01_RS08200;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08200;old_locus_tag=CYJ01_08200 NZ_PJUR01000019.1 Protein Homology CDS 23067 24257 . - 0 ID=cds-WP_101457449.1;Parent=gene-CYJ01_RS08200;Dbxref=GenBank:WP_101457449.1;Name=WP_101457449.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728867.1;locus_tag=CYJ01_RS08200;product=formamidase;protein_id=WP_101457449.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 24441 24701 . - . ID=gene-CYJ01_RS08205;Name=CYJ01_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08205;old_locus_tag=CYJ01_08205 NZ_PJUR01000019.1 Protein Homology CDS 24441 24701 . - 0 ID=cds-WP_014614411.1;Parent=gene-CYJ01_RS08205;Dbxref=GenBank:WP_014614411.1;Name=WP_014614411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=CYJ01_RS08205;product=DUF1871 family protein;protein_id=WP_014614411.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 24723 25316 . - . ID=gene-CYJ01_RS08210;Name=CYJ01_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08210;old_locus_tag=CYJ01_08210 NZ_PJUR01000019.1 Protein Homology CDS 24723 25316 . - 0 ID=cds-WP_014614412.1;Parent=gene-CYJ01_RS08210;Dbxref=GenBank:WP_014614412.1;Name=WP_014614412.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=CYJ01_RS08210;product=peptidylprolyl isomerase;protein_id=WP_014614412.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 25390 25770 . + . ID=gene-CYJ01_RS08215;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08215;old_locus_tag=CYJ01_08215 NZ_PJUR01000019.1 Protein Homology CDS 25390 25770 . + 0 ID=cds-WP_101457450.1;Parent=gene-CYJ01_RS08215;Dbxref=GenBank:WP_101457450.1;Name=WP_101457450.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614413.1;locus_tag=CYJ01_RS08215;product=sporulation phosphorelay system protein KapB;protein_id=WP_101457450.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 25897 28314 . + . ID=gene-CYJ01_RS08220;Name=CYJ01_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08220;old_locus_tag=CYJ01_08220 NZ_PJUR01000019.1 Protein Homology CDS 25897 28314 . + 0 ID=cds-WP_014614414.1;Parent=gene-CYJ01_RS08220;Dbxref=GenBank:WP_014614414.1;Name=WP_014614414.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=CYJ01_RS08220;product=Na+/H+ antiporter subunit A;protein_id=WP_014614414.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 28277 28723 . + . ID=gene-CYJ01_RS08225;Name=CYJ01_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08225;old_locus_tag=CYJ01_08225 NZ_PJUR01000019.1 Protein Homology CDS 28277 28723 . + 0 ID=cds-WP_014614415.1;Parent=gene-CYJ01_RS08225;Dbxref=GenBank:WP_014614415.1;Name=WP_014614415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=CYJ01_RS08225;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_014614415.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 28723 29070 . + . ID=gene-CYJ01_RS08230;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=CYJ01_RS08230;old_locus_tag=CYJ01_08230 NZ_PJUR01000019.1 Protein Homology CDS 28723 29070 . + 0 ID=cds-WP_014614416.1;Parent=gene-CYJ01_RS08230;Dbxref=GenBank:WP_014614416.1;Name=WP_014614416.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=CYJ01_RS08230;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_014614416.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 29060 30559 . + . ID=gene-CYJ01_RS08235;Name=CYJ01_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08235;old_locus_tag=CYJ01_08235 NZ_PJUR01000019.1 Protein Homology CDS 29060 30559 . + 0 ID=cds-WP_101431614.1;Parent=gene-CYJ01_RS08235;Dbxref=GenBank:WP_101431614.1;Name=WP_101431614.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166977.1;locus_tag=CYJ01_RS08235;product=Na+/H+ antiporter subunit D;protein_id=WP_101431614.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 30561 31040 . + . ID=gene-CYJ01_RS08240;Name=CYJ01_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08240;old_locus_tag=CYJ01_08240 NZ_PJUR01000019.1 Protein Homology CDS 30561 31040 . + 0 ID=cds-WP_014614418.1;Parent=gene-CYJ01_RS08240;Dbxref=GenBank:WP_014614418.1;Name=WP_014614418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=CYJ01_RS08240;product=Na+/H+ antiporter subunit E;protein_id=WP_014614418.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 31040 31333 . + . ID=gene-CYJ01_RS08245;Name=CYJ01_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08245;old_locus_tag=CYJ01_08245 NZ_PJUR01000019.1 Protein Homology CDS 31040 31333 . + 0 ID=cds-WP_014614419.1;Parent=gene-CYJ01_RS08245;Dbxref=GenBank:WP_014614419.1;Name=WP_014614419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=CYJ01_RS08245;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_014614419.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 31311 31667 . + . ID=gene-CYJ01_RS08250;Name=CYJ01_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08250;old_locus_tag=CYJ01_08250 NZ_PJUR01000019.1 Protein Homology CDS 31311 31667 . + 0 ID=cds-WP_014614420.1;Parent=gene-CYJ01_RS08250;Dbxref=GenBank:WP_014614420.1;Name=WP_014614420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=CYJ01_RS08250;product=Na+/H+ antiporter subunit G1;protein_id=WP_014614420.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 32604 32981 . - . ID=gene-CYJ01_RS08255;Name=CYJ01_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08255;old_locus_tag=CYJ01_08255 NZ_PJUR01000019.1 Protein Homology CDS 32604 32981 . - 0 ID=cds-WP_037543544.1;Parent=gene-CYJ01_RS08255;Dbxref=GenBank:WP_037543544.1;Name=WP_037543544.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728863.1;locus_tag=CYJ01_RS08255;product=PaaI family thioesterase;protein_id=WP_037543544.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 33005 34318 . - . ID=gene-CYJ01_RS08260;Name=CYJ01_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08260;old_locus_tag=CYJ01_08260 NZ_PJUR01000019.1 Protein Homology CDS 33005 34318 . - 0 ID=cds-WP_101457451.1;Parent=gene-CYJ01_RS08260;Dbxref=GenBank:WP_101457451.1;Name=WP_101457451.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=CYJ01_RS08260;product=Na+/H+ antiporter family protein;protein_id=WP_101457451.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 34456 35943 . - . ID=gene-CYJ01_RS08265;Name=CYJ01_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08265;old_locus_tag=CYJ01_08265 NZ_PJUR01000019.1 Protein Homology CDS 34456 35943 . - 0 ID=cds-WP_101457452.1;Parent=gene-CYJ01_RS08265;Dbxref=GenBank:WP_101457452.1;Name=WP_101457452.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0046872,GO:0070006,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=manganese ion binding|0030145||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614423.1;locus_tag=CYJ01_RS08265;product=leucyl aminopeptidase family protein;protein_id=WP_101457452.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 36208 37410 . - . ID=gene-CYJ01_RS08270;Name=CYJ01_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08270;old_locus_tag=CYJ01_08270 NZ_PJUR01000019.1 Protein Homology CDS 36208 37410 . - 0 ID=cds-WP_101457453.1;Parent=gene-CYJ01_RS08270;Dbxref=GenBank:WP_101457453.1;Name=WP_101457453.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=CYJ01_RS08270;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101457453.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 37831 38190 . - . ID=gene-CYJ01_RS08275;Name=CYJ01_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08275;old_locus_tag=CYJ01_08275 NZ_PJUR01000019.1 Protein Homology CDS 37831 38190 . - 0 ID=cds-WP_014614425.1;Parent=gene-CYJ01_RS08275;Dbxref=GenBank:WP_014614425.1;Name=WP_014614425.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=CYJ01_RS08275;product=HesB/IscA family protein;protein_id=WP_014614425.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 38203 38439 . - . ID=gene-CYJ01_RS08280;Name=CYJ01_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08280;old_locus_tag=CYJ01_08280 NZ_PJUR01000019.1 Protein Homology CDS 38203 38439 . - 0 ID=cds-WP_014614426.1;Parent=gene-CYJ01_RS08280;Dbxref=GenBank:WP_014614426.1;Name=WP_014614426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483813.1;locus_tag=CYJ01_RS08280;product=YuzB family protein;protein_id=WP_014614426.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 38730 39794 . + . ID=gene-CYJ01_RS08285;Name=CYJ01_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08285;old_locus_tag=CYJ01_08285 NZ_PJUR01000019.1 Protein Homology CDS 38730 39794 . + 0 ID=cds-WP_099986653.1;Parent=gene-CYJ01_RS08285;Dbxref=GenBank:WP_099986653.1;Name=WP_099986653.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483814.1;locus_tag=CYJ01_RS08285;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_099986653.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 40145 40483 . - . ID=gene-CYJ01_RS08290;Name=CYJ01_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08290;old_locus_tag=CYJ01_08290 NZ_PJUR01000019.1 Protein Homology CDS 40145 40483 . - 0 ID=cds-WP_014614428.1;Parent=gene-CYJ01_RS08290;Dbxref=GenBank:WP_014614428.1;Name=WP_014614428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614428.1;locus_tag=CYJ01_RS08290;product=YuzD family protein;protein_id=WP_014614428.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 40587 40829 . + . ID=gene-CYJ01_RS08295;Name=CYJ01_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08295;old_locus_tag=CYJ01_08295 NZ_PJUR01000019.1 Protein Homology CDS 40587 40829 . + 0 ID=cds-WP_014614429.1;Parent=gene-CYJ01_RS08295;Dbxref=GenBank:WP_014614429.1;Name=WP_014614429.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=CYJ01_RS08295;product=NifU family protein;protein_id=WP_014614429.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 41413 42378 . - . ID=gene-CYJ01_RS08300;Name=CYJ01_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08300;old_locus_tag=CYJ01_08300 NZ_PJUR01000019.1 Protein Homology CDS 41413 42378 . - 0 ID=cds-WP_014614430.1;Parent=gene-CYJ01_RS08300;Dbxref=GenBank:WP_014614430.1;Name=WP_014614430.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=CYJ01_RS08300;product=2-hydroxyacid dehydrogenase;protein_id=WP_014614430.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 42385 43170 . - . ID=gene-CYJ01_RS08305;Name=CYJ01_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08305;old_locus_tag=CYJ01_08305 NZ_PJUR01000019.1 Protein Homology CDS 42385 43170 . - 0 ID=cds-WP_014614431.1;Parent=gene-CYJ01_RS08305;Dbxref=GenBank:WP_014614431.1;Name=WP_014614431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166989.1;locus_tag=CYJ01_RS08305;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_014614431.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 43174 43605 . - . ID=gene-CYJ01_RS08310;Name=CYJ01_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08310;old_locus_tag=CYJ01_08310 NZ_PJUR01000019.1 Protein Homology CDS 43174 43605 . - 0 ID=cds-WP_031253621.1;Parent=gene-CYJ01_RS08310;Dbxref=GenBank:WP_031253621.1;Name=WP_031253621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481626.1;locus_tag=CYJ01_RS08310;product=DUF86 domain-containing protein;protein_id=WP_031253621.1;transl_table=11 NZ_PJUR01000019.1 RefSeq gene 43706 43972 . + . ID=gene-CYJ01_RS08315;Name=CYJ01_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08315;old_locus_tag=CYJ01_08315 NZ_PJUR01000019.1 Protein Homology CDS 43706 43972 . + 0 ID=cds-WP_096533850.1;Parent=gene-CYJ01_RS08315;Dbxref=GenBank:WP_096533850.1;Name=WP_096533850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=CYJ01_RS08315;product=DUF3055 domain-containing protein;protein_id=WP_096533850.1;transl_table=11 ##sequence-region NZ_PJUR01000002.1 1 134933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000002.1 RefSeq region 1 134933 . + . ID=NZ_PJUR01000002.1:1..134933;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000002.1 RefSeq gene 642 1367 . + . ID=gene-CYJ01_RS01060;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01060;old_locus_tag=CYJ01_01060 NZ_PJUR01000002.1 Protein Homology CDS 642 1367 . + 0 ID=cds-WP_241900517.1;Parent=gene-CYJ01_RS01060;Dbxref=GenBank:WP_241900517.1;Name=WP_241900517.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033546.1;locus_tag=CYJ01_RS01060;product=IS21 family transposase;protein_id=WP_241900517.1;transl_table=11 NZ_PJUR01000002.1 RefSeq pseudogene 1292 2435 . - . ID=gene-CYJ01_RS12460;Name=CYJ01_RS12460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12460;pseudo=true NZ_PJUR01000002.1 Protein Homology CDS 1292 2435 . - 0 ID=cds-CYJ01_RS12460;Parent=gene-CYJ01_RS12460;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ01_RS12460;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 2569 2742 . + . ID=gene-CYJ01_RS12200;Name=CYJ01_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12200 NZ_PJUR01000002.1 Protein Homology CDS 2569 2742 . + 0 ID=cds-WP_241900520.1;Parent=gene-CYJ01_RS12200;Dbxref=GenBank:WP_241900520.1;Name=WP_241900520.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ01_RS12200;product=ATP-binding protein;protein_id=WP_241900520.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 3628 4812 . + . ID=gene-CYJ01_RS01080;Name=CYJ01_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01080;old_locus_tag=CYJ01_01080 NZ_PJUR01000002.1 Protein Homology CDS 3628 4812 . + 0 ID=cds-WP_241662602.1;Parent=gene-CYJ01_RS01080;Dbxref=GenBank:WP_241662602.1;Name=WP_241662602.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612689.1;locus_tag=CYJ01_RS01080;product=DUF418 domain-containing protein;protein_id=WP_241662602.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 4977 5162 . + . ID=gene-CYJ01_RS01085;Name=CYJ01_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01085;old_locus_tag=CYJ01_01085 NZ_PJUR01000002.1 Protein Homology CDS 4977 5162 . + 0 ID=cds-WP_101457108.1;Parent=gene-CYJ01_RS01085;Dbxref=GenBank:WP_101457108.1;Name=WP_101457108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612690.1;locus_tag=CYJ01_RS01085;product=hypothetical protein;protein_id=WP_101457108.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 5630 6745 . + . ID=gene-CYJ01_RS01090;Name=CYJ01_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01090;old_locus_tag=CYJ01_01090 NZ_PJUR01000002.1 Protein Homology CDS 5630 6745 . + 0 ID=cds-WP_101457109.1;Parent=gene-CYJ01_RS01090;Dbxref=GenBank:WP_101457109.1;Name=WP_101457109.1;Ontology_term=GO:0042853,GO:0000286,GO:0051287;gbkey=CDS;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA,NAD binding|0051287||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166648.1;locus_tag=CYJ01_RS01090;product=alanine dehydrogenase;protein_id=WP_101457109.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 6782 7822 . + . ID=gene-CYJ01_RS01095;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CYJ01_RS01095;old_locus_tag=CYJ01_01095 NZ_PJUR01000002.1 Protein Homology CDS 6782 7822 . + 0 ID=cds-WP_014612692.1;Parent=gene-CYJ01_RS01095;Dbxref=GenBank:WP_014612692.1;Name=WP_014612692.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210816.1;locus_tag=CYJ01_RS01095;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_014612692.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 7855 9177 . + . ID=gene-CYJ01_RS01100;Name=CYJ01_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01100;old_locus_tag=CYJ01_01100 NZ_PJUR01000002.1 Protein Homology CDS 7855 9177 . + 0 ID=cds-WP_099991827.1;Parent=gene-CYJ01_RS01100;Dbxref=GenBank:WP_099991827.1;Name=WP_099991827.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612693.1;locus_tag=CYJ01_RS01100;product=APC family permease;protein_id=WP_099991827.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 9401 11449 . + . ID=gene-CYJ01_RS01105;Name=CYJ01_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01105;old_locus_tag=CYJ01_01105 NZ_PJUR01000002.1 Protein Homology CDS 9401 11449 . + 0 ID=cds-WP_101457110.1;Parent=gene-CYJ01_RS01105;Dbxref=GenBank:WP_101457110.1;Name=WP_101457110.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=CYJ01_RS01105;product=heavy metal translocating P-type ATPase;protein_id=WP_101457110.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 12584 13489 . + . ID=gene-CYJ01_RS01115;Name=CYJ01_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01115;old_locus_tag=CYJ01_01115 NZ_PJUR01000002.1 Protein Homology CDS 12584 13489 . + 0 ID=cds-WP_101457111.1;Parent=gene-CYJ01_RS01115;Dbxref=GenBank:WP_101457111.1;Name=WP_101457111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003144009.1;locus_tag=CYJ01_RS01115;product=type II restriction endonuclease;protein_id=WP_101457111.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 13775 13981 . - . ID=gene-CYJ01_RS01120;Name=CYJ01_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01120;old_locus_tag=CYJ01_01120 NZ_PJUR01000002.1 GeneMarkS-2+ CDS 13775 13981 . - 0 ID=cds-WP_101457112.1;Parent=gene-CYJ01_RS01120;Dbxref=GenBank:WP_101457112.1;Name=WP_101457112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS01120;product=hypothetical protein;protein_id=WP_101457112.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 14485 15294 . + . ID=gene-CYJ01_RS01125;Name=CYJ01_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01125;old_locus_tag=CYJ01_01125 NZ_PJUR01000002.1 Protein Homology CDS 14485 15294 . + 0 ID=cds-WP_070407324.1;Parent=gene-CYJ01_RS01125;Dbxref=GenBank:WP_070407324.1;Name=WP_070407324.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: protein motif:HMM:TIGR00571.1;locus_tag=CYJ01_RS01125;product=DNA adenine methylase;protein_id=WP_070407324.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 15307 16086 . + . ID=gene-CYJ01_RS01130;Name=CYJ01_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01130;old_locus_tag=CYJ01_01130 NZ_PJUR01000002.1 Protein Homology CDS 15307 16086 . + 0 ID=cds-WP_241900518.1;Parent=gene-CYJ01_RS01130;Dbxref=GenBank:WP_241900518.1;Name=WP_241900518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263311.1;locus_tag=CYJ01_RS01130;product=DNA-methyltransferase;protein_id=WP_241900518.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 16201 16905 . - . ID=gene-CYJ01_RS01135;Name=CYJ01_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01135;old_locus_tag=CYJ01_01135 NZ_PJUR01000002.1 Protein Homology CDS 16201 16905 . - 0 ID=cds-WP_031254049.1;Parent=gene-CYJ01_RS01135;Dbxref=GenBank:WP_031254049.1;Name=WP_031254049.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=CYJ01_RS01135;product=GntR family transcriptional regulator;protein_id=WP_031254049.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 17231 18673 . + . ID=gene-CYJ01_RS01140;Name=CYJ01_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01140;old_locus_tag=CYJ01_01140 NZ_PJUR01000002.1 Protein Homology CDS 17231 18673 . + 0 ID=cds-WP_014612701.1;Parent=gene-CYJ01_RS01140;Dbxref=GenBank:WP_014612701.1;Name=WP_014612701.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165696.1;locus_tag=CYJ01_RS01140;product=6-phospho-beta-glucosidase;protein_id=WP_014612701.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 19527 21986 . + . ID=gene-CYJ01_RS01145;Name=CYJ01_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01145;old_locus_tag=CYJ01_01145 NZ_PJUR01000002.1 Protein Homology CDS 19527 21986 . + 0 ID=cds-WP_101457157.1;Parent=gene-CYJ01_RS01145;Dbxref=GenBank:WP_101457157.1;Name=WP_101457157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ01_RS01145;product=Ig-like domain-containing protein;protein_id=WP_101457157.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 22323 23747 . - . ID=gene-CYJ01_RS01150;Name=CYJ01_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01150;old_locus_tag=CYJ01_01150 NZ_PJUR01000002.1 Protein Homology CDS 22323 23747 . - 0 ID=cds-WP_101457113.1;Parent=gene-CYJ01_RS01150;Dbxref=GenBank:WP_101457113.1;Name=WP_101457113.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612704.1;locus_tag=CYJ01_RS01150;product=cryptochrome/photolyase family protein;protein_id=WP_101457113.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 23834 24184 . - . ID=gene-CYJ01_RS01155;Name=CYJ01_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01155;old_locus_tag=CYJ01_01155 NZ_PJUR01000002.1 Protein Homology CDS 23834 24184 . - 0 ID=cds-WP_015729806.1;Parent=gene-CYJ01_RS01155;Dbxref=GenBank:WP_015729806.1;Name=WP_015729806.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729806.1;locus_tag=CYJ01_RS01155;product=helix-turn-helix domain-containing protein;protein_id=WP_015729806.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 24262 24942 . + . ID=gene-CYJ01_RS01160;Name=CYJ01_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01160;old_locus_tag=CYJ01_01160 NZ_PJUR01000002.1 Protein Homology CDS 24262 24942 . + 0 ID=cds-WP_101457114.1;Parent=gene-CYJ01_RS01160;Dbxref=GenBank:WP_101457114.1;Name=WP_101457114.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612706.1;locus_tag=CYJ01_RS01160;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_101457114.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 24967 25632 . + . ID=gene-CYJ01_RS01165;Name=CYJ01_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01165;old_locus_tag=CYJ01_01165 NZ_PJUR01000002.1 Protein Homology CDS 24967 25632 . + 0 ID=cds-WP_101457115.1;Parent=gene-CYJ01_RS01165;Dbxref=GenBank:WP_101457115.1;Name=WP_101457115.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723717.1;locus_tag=CYJ01_RS01165;product=SDR family oxidoreductase;protein_id=WP_101457115.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 25636 26640 . + . ID=gene-CYJ01_RS01170;Name=CYJ01_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01170;old_locus_tag=CYJ01_01170 NZ_PJUR01000002.1 Protein Homology CDS 25636 26640 . + 0 ID=cds-WP_096548361.1;Parent=gene-CYJ01_RS01170;Dbxref=GenBank:WP_096548361.1;Name=WP_096548361.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434486.1;locus_tag=CYJ01_RS01170;product=NADP-dependent oxidoreductase;protein_id=WP_096548361.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 26651 27007 . + . ID=gene-CYJ01_RS01175;Name=CYJ01_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01175;old_locus_tag=CYJ01_01175 NZ_PJUR01000002.1 Protein Homology CDS 26651 27007 . + 0 ID=cds-WP_014612709.1;Parent=gene-CYJ01_RS01175;Dbxref=GenBank:WP_014612709.1;Name=WP_014612709.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467555.1;locus_tag=CYJ01_RS01175;product=DoxX family protein;protein_id=WP_014612709.1;transl_table=11 NZ_PJUR01000002.1 RefSeq pseudogene 27192 27329 . + . ID=gene-CYJ01_RS12205;Name=CYJ01_RS12205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12205;old_locus_tag=CYJ01_01180;partial=true;pseudo=true;start_range=.,27192 NZ_PJUR01000002.1 Protein Homology CDS 27192 27329 . + 0 ID=cds-CYJ01_RS12205;Parent=gene-CYJ01_RS12205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009223422.1;locus_tag=CYJ01_RS12205;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,27192;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 27520 28653 . + . ID=gene-CYJ01_RS01185;Name=CYJ01_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01185;old_locus_tag=CYJ01_01185 NZ_PJUR01000002.1 Protein Homology CDS 27520 28653 . + 0 ID=cds-WP_015729803.1;Parent=gene-CYJ01_RS01185;Dbxref=GenBank:WP_015729803.1;Name=WP_015729803.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729803.1;locus_tag=CYJ01_RS01185;product=Fic family protein;protein_id=WP_015729803.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 29219 30385 . + . ID=gene-CYJ01_RS01190;Name=CYJ01_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01190;old_locus_tag=CYJ01_01190 NZ_PJUR01000002.1 Protein Homology CDS 29219 30385 . + 0 ID=cds-WP_037542054.1;Parent=gene-CYJ01_RS01190;Dbxref=GenBank:WP_037542054.1;Name=WP_037542054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612712.1;locus_tag=CYJ01_RS01190;product=ArgE/DapE family deacylase;protein_id=WP_037542054.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 30633 31103 . + . ID=gene-CYJ01_RS01195;Name=CYJ01_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01195;old_locus_tag=CYJ01_01195 NZ_PJUR01000002.1 Protein Homology CDS 30633 31103 . + 0 ID=cds-WP_020220081.1;Parent=gene-CYJ01_RS01195;Dbxref=GenBank:WP_020220081.1;Name=WP_020220081.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612713.1;locus_tag=CYJ01_RS01195;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_020220081.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 31266 32000 . - . ID=gene-CYJ01_RS01200;Name=CYJ01_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01200;old_locus_tag=CYJ01_01200 NZ_PJUR01000002.1 Protein Homology CDS 31266 32000 . - 0 ID=cds-WP_101457116.1;Parent=gene-CYJ01_RS01200;Dbxref=GenBank:WP_101457116.1;Name=WP_101457116.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220080.1;locus_tag=CYJ01_RS01200;product=NAD-dependent protein deacylase;protein_id=WP_101457116.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 32464 33192 . - . ID=gene-CYJ01_RS01205;Name=CYJ01_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01205;old_locus_tag=CYJ01_01205 NZ_PJUR01000002.1 Protein Homology CDS 32464 33192 . - 0 ID=cds-WP_101457117.1;Parent=gene-CYJ01_RS01205;Dbxref=GenBank:WP_101457117.1;Name=WP_101457117.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165719.1;locus_tag=CYJ01_RS01205;product=Crp/Fnr family transcriptional regulator;protein_id=WP_101457117.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 33211 34152 . - . ID=gene-CYJ01_RS01210;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CYJ01_RS01210;old_locus_tag=CYJ01_01210 NZ_PJUR01000002.1 Protein Homology CDS 33211 34152 . - 0 ID=cds-WP_014612716.1;Parent=gene-CYJ01_RS01210;Dbxref=GenBank:WP_014612716.1;Name=WP_014612716.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612716.1;locus_tag=CYJ01_RS01210;product=carbamate kinase;protein_id=WP_014612716.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 34168 35598 . - . ID=gene-CYJ01_RS01215;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CYJ01_RS01215;old_locus_tag=CYJ01_01215 NZ_PJUR01000002.1 Protein Homology CDS 34168 35598 . - 0 ID=cds-WP_101457118.1;Parent=gene-CYJ01_RS01215;Dbxref=GenBank:WP_101457118.1;Name=WP_101457118.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612717.1;locus_tag=CYJ01_RS01215;product=arginine-ornithine antiporter;protein_id=WP_101457118.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 35719 36726 . - . ID=gene-CYJ01_RS01220;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ01_RS01220;old_locus_tag=CYJ01_01220 NZ_PJUR01000002.1 Protein Homology CDS 35719 36726 . - 0 ID=cds-WP_014612718.1;Parent=gene-CYJ01_RS01220;Dbxref=GenBank:WP_014612718.1;Name=WP_014612718.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=CYJ01_RS01220;product=ornithine carbamoyltransferase;protein_id=WP_014612718.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 36763 37998 . - . ID=gene-CYJ01_RS01225;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01225;old_locus_tag=CYJ01_01225 NZ_PJUR01000002.1 Protein Homology CDS 36763 37998 . - 0 ID=cds-WP_014612719.1;Parent=gene-CYJ01_RS01225;Dbxref=GenBank:WP_014612719.1;Name=WP_014612719.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CYJ01_RS01225;product=arginine deiminase;protein_id=WP_014612719.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 38386 38865 . + . ID=gene-CYJ01_RS01230;Name=CYJ01_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01230;old_locus_tag=CYJ01_01230 NZ_PJUR01000002.1 Protein Homology CDS 38386 38865 . + 0 ID=cds-WP_015729798.1;Parent=gene-CYJ01_RS01230;Dbxref=GenBank:WP_015729798.1;Name=WP_015729798.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729798.1;locus_tag=CYJ01_RS01230;product=arginine repressor;protein_id=WP_015729798.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 38983 39855 . + . ID=gene-CYJ01_RS01235;Name=CYJ01_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01235;old_locus_tag=CYJ01_01235 NZ_PJUR01000002.1 Protein Homology CDS 38983 39855 . + 0 ID=cds-WP_015729797.1;Parent=gene-CYJ01_RS01235;Dbxref=GenBank:WP_015729797.1;Name=WP_015729797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612721.1;locus_tag=CYJ01_RS01235;product=alpha/beta hydrolase;protein_id=WP_015729797.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 39983 40585 . - . ID=gene-CYJ01_RS01240;Name=CYJ01_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01240;old_locus_tag=CYJ01_01240 NZ_PJUR01000002.1 Protein Homology CDS 39983 40585 . - 0 ID=cds-WP_015729796.1;Parent=gene-CYJ01_RS01240;Dbxref=GenBank:WP_015729796.1;Name=WP_015729796.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=CYJ01_RS01240;product=response regulator transcription factor;protein_id=WP_015729796.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 40582 41682 . - . ID=gene-CYJ01_RS01245;Name=CYJ01_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01245;old_locus_tag=CYJ01_01245 NZ_PJUR01000002.1 Protein Homology CDS 40582 41682 . - 0 ID=cds-WP_037542059.1;Parent=gene-CYJ01_RS01245;Dbxref=GenBank:WP_037542059.1;Name=WP_037542059.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165727.1;locus_tag=CYJ01_RS01245;product=sensor histidine kinase;protein_id=WP_037542059.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 41679 42410 . - . ID=gene-CYJ01_RS01250;Name=CYJ01_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01250;old_locus_tag=CYJ01_01250 NZ_PJUR01000002.1 Protein Homology CDS 41679 42410 . - 0 ID=cds-WP_015729794.1;Parent=gene-CYJ01_RS01250;Dbxref=GenBank:WP_015729794.1;Name=WP_015729794.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165728.1;locus_tag=CYJ01_RS01250;product=ABC transporter permease;protein_id=WP_015729794.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 42407 43279 . - . ID=gene-CYJ01_RS01255;Name=CYJ01_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01255;old_locus_tag=CYJ01_01255 NZ_PJUR01000002.1 Protein Homology CDS 42407 43279 . - 0 ID=cds-WP_020220079.1;Parent=gene-CYJ01_RS01255;Dbxref=GenBank:WP_020220079.1;Name=WP_020220079.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220079.1;locus_tag=CYJ01_RS01255;product=ABC transporter ATP-binding protein;protein_id=WP_020220079.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 43506 43829 . - . ID=gene-CYJ01_RS01260;Name=CYJ01_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01260;old_locus_tag=CYJ01_01260 NZ_PJUR01000002.1 Protein Homology CDS 43506 43829 . - 0 ID=cds-WP_014612722.1;Parent=gene-CYJ01_RS01260;Dbxref=GenBank:WP_014612722.1;Name=WP_014612722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165730.1;locus_tag=CYJ01_RS01260;product=magnetosome magnetite crystal formation protein family;protein_id=WP_014612722.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 44424 45257 . + . ID=gene-CYJ01_RS01265;Name=CYJ01_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01265;old_locus_tag=CYJ01_01265 NZ_PJUR01000002.1 Protein Homology CDS 44424 45257 . + 0 ID=cds-WP_014612723.1;Parent=gene-CYJ01_RS01265;Dbxref=GenBank:WP_014612723.1;Name=WP_014612723.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729791.1;locus_tag=CYJ01_RS01265;product=peptidoglycan recognition protein family protein;protein_id=WP_014612723.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 45312 45812 . - . ID=gene-CYJ01_RS01270;Name=CYJ01_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01270;old_locus_tag=CYJ01_01270 NZ_PJUR01000002.1 Protein Homology CDS 45312 45812 . - 0 ID=cds-WP_101457119.1;Parent=gene-CYJ01_RS01270;Dbxref=GenBank:WP_101457119.1;Name=WP_101457119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612724.1;locus_tag=CYJ01_RS01270;product=YagU family protein;protein_id=WP_101457119.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 46195 46752 . + . ID=gene-CYJ01_RS01275;Name=CYJ01_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01275;old_locus_tag=CYJ01_01275 NZ_PJUR01000002.1 Protein Homology CDS 46195 46752 . + 0 ID=cds-WP_014612725.1;Parent=gene-CYJ01_RS01275;Dbxref=GenBank:WP_014612725.1;Name=WP_014612725.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165735.1;locus_tag=CYJ01_RS01275;product=NADPH-dependent FMN reductase;protein_id=WP_014612725.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 47412 51485 . + . ID=gene-CYJ01_RS01280;Name=CYJ01_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01280;old_locus_tag=CYJ01_01280 NZ_PJUR01000002.1 Protein Homology CDS 47412 51485 . + 0 ID=cds-WP_101457120.1;Parent=gene-CYJ01_RS01280;Dbxref=GenBank:WP_101457120.1;Name=WP_101457120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612726.1;locus_tag=CYJ01_RS01280;product=Rib/alpha-like domain-containing protein;protein_id=WP_101457120.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 51687 51968 . + . ID=gene-CYJ01_RS01285;Name=CYJ01_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01285;old_locus_tag=CYJ01_01285 NZ_PJUR01000002.1 Protein Homology CDS 51687 51968 . + 0 ID=cds-WP_015729789.1;Parent=gene-CYJ01_RS01285;Dbxref=GenBank:WP_015729789.1;Name=WP_015729789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612727.1;locus_tag=CYJ01_RS01285;product=hypothetical protein;protein_id=WP_015729789.1;transl_table=11 NZ_PJUR01000002.1 RefSeq pseudogene 51979 52126 . + . ID=gene-CYJ01_RS01290;Name=CYJ01_RS01290;end_range=52126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS01290;old_locus_tag=CYJ01_01290;partial=true;pseudo=true;start_range=.,51979 NZ_PJUR01000002.1 Protein Homology CDS 51979 52126 . + 0 ID=cds-CYJ01_RS01290;Parent=gene-CYJ01_RS01290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=52126,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ01_RS01290;partial=true;product=transposase;pseudo=true;start_range=.,51979;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 52665 53387 . + . ID=gene-CYJ01_RS01295;Name=CYJ01_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01295;old_locus_tag=CYJ01_01295 NZ_PJUR01000002.1 Protein Homology CDS 52665 53387 . + 0 ID=cds-WP_241900519.1;Parent=gene-CYJ01_RS01295;Dbxref=GenBank:WP_241900519.1;Name=WP_241900519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=CYJ01_RS01295;product=DUF418 domain-containing protein;protein_id=WP_241900519.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 53678 54919 . - . ID=gene-CYJ01_RS01300;Name=CYJ01_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01300;old_locus_tag=CYJ01_01300 NZ_PJUR01000002.1 Protein Homology CDS 53678 54919 . - 0 ID=cds-WP_101457121.1;Parent=gene-CYJ01_RS01300;Dbxref=GenBank:WP_101457121.1;Name=WP_101457121.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729788.1;locus_tag=CYJ01_RS01300;product=aminoacyltransferase;protein_id=WP_101457121.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 55218 56198 . + . ID=gene-CYJ01_RS01305;Name=CYJ01_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01305;old_locus_tag=CYJ01_01305 NZ_PJUR01000002.1 Protein Homology CDS 55218 56198 . + 0 ID=cds-WP_020220073.1;Parent=gene-CYJ01_RS01305;Dbxref=GenBank:WP_020220073.1;Name=WP_020220073.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729787.1;locus_tag=CYJ01_RS01305;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220073.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 56383 57459 . + . ID=gene-CYJ01_RS01310;Name=CYJ01_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01310;old_locus_tag=CYJ01_01310 NZ_PJUR01000002.1 Protein Homology CDS 56383 57459 . + 0 ID=cds-WP_096533299.1;Parent=gene-CYJ01_RS01310;Dbxref=GenBank:WP_096533299.1;Name=WP_096533299.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498776.1;locus_tag=CYJ01_RS01310;product=Gfo/Idh/MocA family protein;protein_id=WP_096533299.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 57481 58521 . + . ID=gene-CYJ01_RS01315;Name=CYJ01_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01315;old_locus_tag=CYJ01_01315 NZ_PJUR01000002.1 Protein Homology CDS 57481 58521 . + 0 ID=cds-WP_101457122.1;Parent=gene-CYJ01_RS01315;Dbxref=GenBank:WP_101457122.1;Name=WP_101457122.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168826.1;locus_tag=CYJ01_RS01315;product=Gfo/Idh/MocA family protein;protein_id=WP_101457122.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 58537 59505 . + . ID=gene-CYJ01_RS01320;Name=CYJ01_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01320;old_locus_tag=CYJ01_01320 NZ_PJUR01000002.1 Protein Homology CDS 58537 59505 . + 0 ID=cds-WP_101457123.1;Parent=gene-CYJ01_RS01320;Dbxref=GenBank:WP_101457123.1;Name=WP_101457123.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498778.1;locus_tag=CYJ01_RS01320;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_101457123.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 59552 61198 . + . ID=gene-CYJ01_RS01325;Name=CYJ01_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01325;old_locus_tag=CYJ01_01325 NZ_PJUR01000002.1 Protein Homology CDS 59552 61198 . + 0 ID=cds-WP_181137774.1;Parent=gene-CYJ01_RS01325;Dbxref=GenBank:WP_181137774.1;Name=WP_181137774.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364983.1;locus_tag=CYJ01_RS01325;product=glycoside hydrolase family 13 protein;protein_id=WP_181137774.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 61394 61714 . + . ID=gene-CYJ01_RS01330;Name=CYJ01_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01330;old_locus_tag=CYJ01_01330 NZ_PJUR01000002.1 Protein Homology CDS 61394 61714 . + 0 ID=cds-WP_241900521.1;Parent=gene-CYJ01_RS01330;Dbxref=GenBank:WP_241900521.1;Name=WP_241900521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166788.1;locus_tag=CYJ01_RS01330;product=hypothetical protein;protein_id=WP_241900521.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 61766 62605 . - . ID=gene-CYJ01_RS01335;Name=CYJ01_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01335;old_locus_tag=CYJ01_01335 NZ_PJUR01000002.1 Protein Homology CDS 61766 62605 . - 0 ID=cds-WP_014612739.1;Parent=gene-CYJ01_RS01335;Dbxref=GenBank:WP_014612739.1;Name=WP_014612739.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166790.1;locus_tag=CYJ01_RS01335;product=sugar ABC transporter permease;protein_id=WP_014612739.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 62607 63875 . - . ID=gene-CYJ01_RS01340;Name=CYJ01_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01340;old_locus_tag=CYJ01_01340 NZ_PJUR01000002.1 Protein Homology CDS 62607 63875 . - 0 ID=cds-WP_101457126.1;Parent=gene-CYJ01_RS01340;Dbxref=GenBank:WP_101457126.1;Name=WP_101457126.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498774.1;locus_tag=CYJ01_RS01340;product=sugar ABC transporter permease;protein_id=WP_101457126.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 63890 65149 . - . ID=gene-CYJ01_RS01345;Name=CYJ01_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01345;old_locus_tag=CYJ01_01345 NZ_PJUR01000002.1 Protein Homology CDS 63890 65149 . - 0 ID=cds-WP_101457127.1;Parent=gene-CYJ01_RS01345;Dbxref=GenBank:WP_101457127.1;Name=WP_101457127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729782.1;locus_tag=CYJ01_RS01345;product=extracellular solute-binding protein;protein_id=WP_101457127.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 65163 66260 . - . ID=gene-CYJ01_RS01350;Name=CYJ01_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01350;old_locus_tag=CYJ01_01350 NZ_PJUR01000002.1 Protein Homology CDS 65163 66260 . - 0 ID=cds-WP_014612742.1;Parent=gene-CYJ01_RS01350;Dbxref=GenBank:WP_014612742.1;Name=WP_014612742.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498772.1;locus_tag=CYJ01_RS01350;product=ABC transporter ATP-binding protein;protein_id=WP_014612742.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 66693 67865 . - . ID=gene-CYJ01_RS01355;Name=CYJ01_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01355;old_locus_tag=CYJ01_01355 NZ_PJUR01000002.1 Protein Homology CDS 66693 67865 . - 0 ID=cds-WP_101457128.1;Parent=gene-CYJ01_RS01355;Dbxref=GenBank:WP_101457128.1;Name=WP_101457128.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612743.1;locus_tag=CYJ01_RS01355;product=cation:proton antiporter;protein_id=WP_101457128.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 67871 68356 . - . ID=gene-CYJ01_RS01360;Name=CYJ01_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01360;old_locus_tag=CYJ01_01360 NZ_PJUR01000002.1 Protein Homology CDS 67871 68356 . - 0 ID=cds-WP_014612744.1;Parent=gene-CYJ01_RS01360;Dbxref=GenBank:WP_014612744.1;Name=WP_014612744.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612744.1;locus_tag=CYJ01_RS01360;product=cation:proton antiporter regulatory subunit;protein_id=WP_014612744.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 68502 68945 . + . ID=gene-CYJ01_RS01365;Name=CYJ01_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01365;old_locus_tag=CYJ01_01365 NZ_PJUR01000002.1 Protein Homology CDS 68502 68945 . + 0 ID=cds-WP_037542073.1;Parent=gene-CYJ01_RS01365;Dbxref=GenBank:WP_037542073.1;Name=WP_037542073.1;Ontology_term=GO:0005506,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729781.1;locus_tag=CYJ01_RS01365;product=(4Fe-4S)-binding protein;protein_id=WP_037542073.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 68961 69851 . + . ID=gene-CYJ01_RS01370;Name=CYJ01_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01370;old_locus_tag=CYJ01_01370 NZ_PJUR01000002.1 Protein Homology CDS 68961 69851 . + 0 ID=cds-WP_014612746.1;Parent=gene-CYJ01_RS01370;Dbxref=GenBank:WP_014612746.1;Name=WP_014612746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612746.1;locus_tag=CYJ01_RS01370;product=VOC family protein;protein_id=WP_014612746.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 70077 71267 . + . ID=gene-CYJ01_RS01375;Name=CYJ01_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01375;old_locus_tag=CYJ01_01375 NZ_PJUR01000002.1 Protein Homology CDS 70077 71267 . + 0 ID=cds-WP_101457129.1;Parent=gene-CYJ01_RS01375;Dbxref=GenBank:WP_101457129.1;Name=WP_101457129.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166799.1;locus_tag=CYJ01_RS01375;product=MFS transporter;protein_id=WP_101457129.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 71357 76057 . - . ID=gene-CYJ01_RS01380;Name=spsG;gbkey=Gene;gene=spsG;gene_biotype=protein_coding;locus_tag=CYJ01_RS01380;old_locus_tag=CYJ01_01380 NZ_PJUR01000002.1 Protein Homology CDS 71357 76057 . - 0 ID=cds-WP_101457130.1;Parent=gene-CYJ01_RS01380;Dbxref=GenBank:WP_101457130.1;Name=WP_101457130.1;gbkey=CDS;gene=spsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612754.1;locus_tag=CYJ01_RS01380;product=LPXTG-anchored putative endo-alpha-N-acetylgalactosaminidase SpsG;protein_id=WP_101457130.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 76495 77205 . + . ID=gene-CYJ01_RS01385;Name=CYJ01_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01385;old_locus_tag=CYJ01_01385 NZ_PJUR01000002.1 Protein Homology CDS 76495 77205 . + 0 ID=cds-WP_014612756.1;Parent=gene-CYJ01_RS01385;Dbxref=GenBank:WP_014612756.1;Name=WP_014612756.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612756.1;locus_tag=CYJ01_RS01385;product=GntR family transcriptional regulator;protein_id=WP_014612756.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 77234 78349 . + . ID=gene-CYJ01_RS01390;Name=CYJ01_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01390;old_locus_tag=CYJ01_01390 NZ_PJUR01000002.1 Protein Homology CDS 77234 78349 . + 0 ID=cds-WP_065353941.1;Parent=gene-CYJ01_RS01390;Dbxref=GenBank:WP_065353941.1;Name=WP_065353941.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166802.1;locus_tag=CYJ01_RS01390;product=SIS domain-containing protein;protein_id=WP_065353941.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 78356 79294 . + . ID=gene-CYJ01_RS01395;Name=CYJ01_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01395;old_locus_tag=CYJ01_01395 NZ_PJUR01000002.1 Protein Homology CDS 78356 79294 . + 0 ID=cds-WP_101457131.1;Parent=gene-CYJ01_RS01395;Dbxref=GenBank:WP_101457131.1;Name=WP_101457131.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168840.1;locus_tag=CYJ01_RS01395;product=1-phosphofructokinase family hexose kinase;protein_id=WP_101457131.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 79288 80229 . + . ID=gene-CYJ01_RS01400;Name=CYJ01_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01400;old_locus_tag=CYJ01_01400 NZ_PJUR01000002.1 Protein Homology CDS 79288 80229 . + 0 ID=cds-WP_014612759.1;Parent=gene-CYJ01_RS01400;Dbxref=GenBank:WP_014612759.1;Name=WP_014612759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612759.1;locus_tag=CYJ01_RS01400;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_014612759.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 80242 82014 . + . ID=gene-CYJ01_RS01405;Name=CYJ01_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01405;old_locus_tag=CYJ01_01405 NZ_PJUR01000002.1 Protein Homology CDS 80242 82014 . + 0 ID=cds-WP_101457132.1;Parent=gene-CYJ01_RS01405;Dbxref=GenBank:WP_101457132.1;Name=WP_101457132.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166805.1;locus_tag=CYJ01_RS01405;product=glycoside hydrolase family 35 protein;protein_id=WP_101457132.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 82029 82508 . + . ID=gene-CYJ01_RS01410;Name=CYJ01_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01410;old_locus_tag=CYJ01_01410 NZ_PJUR01000002.1 Protein Homology CDS 82029 82508 . + 0 ID=cds-WP_014612761.1;Parent=gene-CYJ01_RS01410;Dbxref=GenBank:WP_014612761.1;Name=WP_014612761.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=CYJ01_RS01410;product=PTS sugar transporter subunit IIB;protein_id=WP_014612761.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 82530 83429 . + . ID=gene-CYJ01_RS01415;Name=CYJ01_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01415;old_locus_tag=CYJ01_01415 NZ_PJUR01000002.1 Protein Homology CDS 82530 83429 . + 0 ID=cds-WP_014612762.1;Parent=gene-CYJ01_RS01415;Dbxref=GenBank:WP_014612762.1;Name=WP_014612762.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=CYJ01_RS01415;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_014612762.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 83416 84300 . + . ID=gene-CYJ01_RS01420;Name=CYJ01_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01420;old_locus_tag=CYJ01_01420 NZ_PJUR01000002.1 Protein Homology CDS 83416 84300 . + 0 ID=cds-WP_014612763.1;Parent=gene-CYJ01_RS01420;Dbxref=GenBank:WP_014612763.1;Name=WP_014612763.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=CYJ01_RS01420;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014612763.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 84322 84723 . + . ID=gene-CYJ01_RS01425;Name=CYJ01_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01425;old_locus_tag=CYJ01_01425 NZ_PJUR01000002.1 Protein Homology CDS 84322 84723 . + 0 ID=cds-WP_020219969.1;Parent=gene-CYJ01_RS01425;Dbxref=GenBank:WP_020219969.1;Name=WP_020219969.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612764.1;locus_tag=CYJ01_RS01425;product=PTS sugar transporter subunit IIA;protein_id=WP_020219969.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 84755 85909 . + . ID=gene-CYJ01_RS01430;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01430;old_locus_tag=CYJ01_01430 NZ_PJUR01000002.1 Protein Homology CDS 84755 85909 . + 0 ID=cds-WP_063284828.1;Parent=gene-CYJ01_RS01430;Dbxref=GenBank:WP_063284828.1;Name=WP_063284828.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612765.1;locus_tag=CYJ01_RS01430;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_063284828.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 86096 86611 . - . ID=gene-CYJ01_RS01435;Name=CYJ01_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01435;old_locus_tag=CYJ01_01435 NZ_PJUR01000002.1 Protein Homology CDS 86096 86611 . - 0 ID=cds-WP_014612766.1;Parent=gene-CYJ01_RS01435;Dbxref=GenBank:WP_014612766.1;Name=WP_014612766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446907.1;locus_tag=CYJ01_RS01435;product=YceI family protein;protein_id=WP_014612766.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 87010 89070 . + . ID=gene-CYJ01_RS01440;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ01_RS01440;old_locus_tag=CYJ01_01440 NZ_PJUR01000002.1 Protein Homology CDS 87010 89070 . + 0 ID=cds-WP_096538175.1;Parent=gene-CYJ01_RS01440;Dbxref=GenBank:WP_096538175.1;Name=WP_096538175.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166817.1;locus_tag=CYJ01_RS01440;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_096538175.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 89511 90443 . + . ID=gene-CYJ01_RS01445;Name=CYJ01_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01445;old_locus_tag=CYJ01_01445 NZ_PJUR01000002.1 Protein Homology CDS 89511 90443 . + 0 ID=cds-WP_014612768.1;Parent=gene-CYJ01_RS01445;Dbxref=GenBank:WP_014612768.1;Name=WP_014612768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612768.1;locus_tag=CYJ01_RS01445;product=lactate/malate family dehydrogenase;protein_id=WP_014612768.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 90478 91836 . + . ID=gene-CYJ01_RS01450;Name=CYJ01_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01450;old_locus_tag=CYJ01_01450 NZ_PJUR01000002.1 Protein Homology CDS 90478 91836 . + 0 ID=cds-WP_172425784.1;Parent=gene-CYJ01_RS01450;Dbxref=GenBank:WP_172425784.1;Name=WP_172425784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166820.1;locus_tag=CYJ01_RS01450;product=YjiH family protein;protein_id=WP_172425784.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 91867 92634 . + . ID=gene-CYJ01_RS01455;Name=CYJ01_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01455;old_locus_tag=CYJ01_01455 NZ_PJUR01000002.1 Protein Homology CDS 91867 92634 . + 0 ID=cds-WP_101457133.1;Parent=gene-CYJ01_RS01455;Dbxref=GenBank:WP_101457133.1;Name=WP_101457133.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612770.1;locus_tag=CYJ01_RS01455;product=IclR family transcriptional regulator;protein_id=WP_101457133.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 92896 93099 . + . ID=gene-CYJ01_RS01460;Name=CYJ01_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01460;old_locus_tag=CYJ01_01460 NZ_PJUR01000002.1 Protein Homology CDS 92896 93099 . + 0 ID=cds-WP_014612771.1;Parent=gene-CYJ01_RS01460;Dbxref=GenBank:WP_014612771.1;Name=WP_014612771.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=CYJ01_RS01460;product=helix-turn-helix transcriptional regulator;protein_id=WP_014612771.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 93096 93821 . + . ID=gene-CYJ01_RS01465;Name=CYJ01_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01465;old_locus_tag=CYJ01_01465 NZ_PJUR01000002.1 Protein Homology CDS 93096 93821 . + 0 ID=cds-WP_101457134.1;Parent=gene-CYJ01_RS01465;Dbxref=GenBank:WP_101457134.1;Name=WP_101457134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612772.1;locus_tag=CYJ01_RS01465;product=DUF3169 family protein;protein_id=WP_101457134.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 93951 94994 . - . ID=gene-CYJ01_RS01470;Name=CYJ01_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01470;old_locus_tag=CYJ01_01470 NZ_PJUR01000002.1 Protein Homology CDS 93951 94994 . - 0 ID=cds-WP_014612773.1;Parent=gene-CYJ01_RS01470;Dbxref=GenBank:WP_014612773.1;Name=WP_014612773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166823.1;locus_tag=CYJ01_RS01470;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014612773.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 95253 96011 . + . ID=gene-CYJ01_RS01475;Name=CYJ01_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01475;old_locus_tag=CYJ01_01475 NZ_PJUR01000002.1 Protein Homology CDS 95253 96011 . + 0 ID=cds-WP_101457135.1;Parent=gene-CYJ01_RS01475;Dbxref=GenBank:WP_101457135.1;Name=WP_101457135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729770.1;locus_tag=CYJ01_RS01475;product=spr1630 family ClpXP-sensitive toxin;protein_id=WP_101457135.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 96033 97220 . + . ID=gene-CYJ01_RS01480;Name=CYJ01_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01480;old_locus_tag=CYJ01_01480 NZ_PJUR01000002.1 Protein Homology CDS 96033 97220 . + 0 ID=cds-WP_101457136.1;Parent=gene-CYJ01_RS01480;Dbxref=GenBank:WP_101457136.1;Name=WP_101457136.1;Ontology_term=GO:0001217;gbkey=CDS;go_function=DNA-binding transcription repressor activity|0001217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612775.1;locus_tag=CYJ01_RS01480;product=spr1629 family repressor/antitoxin;protein_id=WP_101457136.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 97316 98920 . - . ID=gene-CYJ01_RS01485;Name=CYJ01_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01485;old_locus_tag=CYJ01_01485 NZ_PJUR01000002.1 Protein Homology CDS 97316 98920 . - 0 ID=cds-WP_101457137.1;Parent=gene-CYJ01_RS01485;Dbxref=GenBank:WP_101457137.1;Name=WP_101457137.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612776.1;locus_tag=CYJ01_RS01485;product=L-lactate permease;protein_id=WP_101457137.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 99388 100065 . + . ID=gene-CYJ01_RS01490;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CYJ01_RS01490;old_locus_tag=CYJ01_01490 NZ_PJUR01000002.1 Protein Homology CDS 99388 100065 . + 0 ID=cds-WP_101457138.1;Parent=gene-CYJ01_RS01490;Dbxref=GenBank:WP_101457138.1;Name=WP_101457138.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=CYJ01_RS01490;product=dethiobiotin synthase;protein_id=WP_101457138.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 100055 101407 . + . ID=gene-CYJ01_RS01495;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01495;old_locus_tag=CYJ01_01495 NZ_PJUR01000002.1 Protein Homology CDS 100055 101407 . + 0 ID=cds-WP_101457139.1;Parent=gene-CYJ01_RS01495;Dbxref=GenBank:WP_101457139.1;Name=WP_101457139.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=CYJ01_RS01495;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_101457139.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 101410 102531 . + . ID=gene-CYJ01_RS01500;Name=CYJ01_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01500;old_locus_tag=CYJ01_01500 NZ_PJUR01000002.1 Protein Homology CDS 101410 102531 . + 0 ID=cds-WP_101457140.1;Parent=gene-CYJ01_RS01500;Dbxref=GenBank:WP_101457140.1;Name=WP_101457140.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729765.1;locus_tag=CYJ01_RS01500;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101457140.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 102534 103223 . + . ID=gene-CYJ01_RS01505;Name=CYJ01_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01505;old_locus_tag=CYJ01_01505 NZ_PJUR01000002.1 Protein Homology CDS 102534 103223 . + 0 ID=cds-WP_101457141.1;Parent=gene-CYJ01_RS01505;Dbxref=GenBank:WP_101457141.1;Name=WP_101457141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612780.1;locus_tag=CYJ01_RS01505;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_101457141.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 103406 103921 . - . ID=gene-CYJ01_RS01510;Name=CYJ01_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01510;old_locus_tag=CYJ01_01510 NZ_PJUR01000002.1 Protein Homology CDS 103406 103921 . - 0 ID=cds-WP_101457142.1;Parent=gene-CYJ01_RS01510;Dbxref=GenBank:WP_101457142.1;Name=WP_101457142.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612788.1;locus_tag=CYJ01_RS01510;product=DoxX family protein;protein_id=WP_101457142.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 104305 104931 . - . ID=gene-CYJ01_RS01515;Name=CYJ01_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01515;old_locus_tag=CYJ01_01515 NZ_PJUR01000002.1 Protein Homology CDS 104305 104931 . - 0 ID=cds-WP_101457143.1;Parent=gene-CYJ01_RS01515;Dbxref=GenBank:WP_101457143.1;Name=WP_101457143.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=CYJ01_RS01515;product=FMN-dependent NADH-azoreductase;protein_id=WP_101457143.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 105192 105884 . + . ID=gene-CYJ01_RS01520;Name=CYJ01_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01520;old_locus_tag=CYJ01_01520 NZ_PJUR01000002.1 Protein Homology CDS 105192 105884 . + 0 ID=cds-WP_101457144.1;Parent=gene-CYJ01_RS01520;Dbxref=GenBank:WP_101457144.1;Name=WP_101457144.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612790.1;locus_tag=CYJ01_RS01520;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_101457144.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 106145 106561 . + . ID=gene-CYJ01_RS01525;Name=CYJ01_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01525;old_locus_tag=CYJ01_01525 NZ_PJUR01000002.1 Protein Homology CDS 106145 106561 . + 0 ID=cds-WP_014612791.1;Parent=gene-CYJ01_RS01525;Dbxref=GenBank:WP_014612791.1;Name=WP_014612791.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612791.1;locus_tag=CYJ01_RS01525;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014612791.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 106646 108073 . - . ID=gene-CYJ01_RS01530;Name=CYJ01_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01530;old_locus_tag=CYJ01_01530 NZ_PJUR01000002.1 Protein Homology CDS 106646 108073 . - 0 ID=cds-WP_101457145.1;Parent=gene-CYJ01_RS01530;Dbxref=GenBank:WP_101457145.1;Name=WP_101457145.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612792.1;locus_tag=CYJ01_RS01530;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_101457145.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 108336 108644 . - . ID=gene-CYJ01_RS01535;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=CYJ01_RS01535;old_locus_tag=CYJ01_01535 NZ_PJUR01000002.1 Protein Homology CDS 108336 108644 . - 0 ID=cds-WP_101457146.1;Parent=gene-CYJ01_RS01535;Dbxref=GenBank:WP_101457146.1;Name=WP_101457146.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612793.1;locus_tag=CYJ01_RS01535;product=SPIN family peroxidase inhibitor;protein_id=WP_101457146.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 109019 109453 . - . ID=gene-CYJ01_RS01540;Name=CYJ01_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01540;old_locus_tag=CYJ01_01540 NZ_PJUR01000002.1 Protein Homology CDS 109019 109453 . - 0 ID=cds-WP_014612794.1;Parent=gene-CYJ01_RS01540;Dbxref=GenBank:WP_014612794.1;Name=WP_014612794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=CYJ01_RS01540;product=Hsp20/alpha crystallin family protein;protein_id=WP_014612794.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 109900 110430 . + . ID=gene-CYJ01_RS01545;Name=CYJ01_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01545;old_locus_tag=CYJ01_01545 NZ_PJUR01000002.1 Protein Homology CDS 109900 110430 . + 0 ID=cds-WP_101457147.1;Parent=gene-CYJ01_RS01545;Dbxref=GenBank:WP_101457147.1;Name=WP_101457147.1;Ontology_term=GO:0016151,GO:0016765;gbkey=CDS;go_function=nickel cation binding|0016151||IEA,transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612795.1;locus_tag=CYJ01_RS01545;product=YfiT family bacillithiol transferase;protein_id=WP_101457147.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 110678 112168 . + . ID=gene-CYJ01_RS01550;Name=CYJ01_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01550;old_locus_tag=CYJ01_01550 NZ_PJUR01000002.1 Protein Homology CDS 110678 112168 . + 0 ID=cds-WP_014612796.1;Parent=gene-CYJ01_RS01550;Dbxref=GenBank:WP_014612796.1;Name=WP_014612796.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=CYJ01_RS01550;product=catalase;protein_id=WP_014612796.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 112384 112707 . + . ID=gene-CYJ01_RS01555;Name=CYJ01_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01555;old_locus_tag=CYJ01_01555 NZ_PJUR01000002.1 Protein Homology CDS 112384 112707 . + 0 ID=cds-WP_101457148.1;Parent=gene-CYJ01_RS01555;Dbxref=GenBank:WP_101457148.1;Name=WP_101457148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612797.1;locus_tag=CYJ01_RS01555;product=hypothetical protein;protein_id=WP_101457148.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 112829 113275 . + . ID=gene-CYJ01_RS01560;Name=CYJ01_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01560;old_locus_tag=CYJ01_01560 NZ_PJUR01000002.1 Protein Homology CDS 112829 113275 . + 0 ID=cds-WP_014612798.1;Parent=gene-CYJ01_RS01560;Dbxref=GenBank:WP_014612798.1;Name=WP_014612798.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166850.1;locus_tag=CYJ01_RS01560;product=Dps family protein;protein_id=WP_014612798.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 114243 115619 . + . ID=gene-CYJ01_RS01565;Name=CYJ01_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01565;old_locus_tag=CYJ01_01565 NZ_PJUR01000002.1 Protein Homology CDS 114243 115619 . + 0 ID=cds-WP_014612801.1;Parent=gene-CYJ01_RS01565;Dbxref=GenBank:WP_014612801.1;Name=WP_014612801.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612801.1;locus_tag=CYJ01_RS01565;product=sodium:solute symporter family protein;protein_id=WP_014612801.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 115682 116839 . + . ID=gene-CYJ01_RS01570;Name=CYJ01_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01570;old_locus_tag=CYJ01_01570 NZ_PJUR01000002.1 Protein Homology CDS 115682 116839 . + 0 ID=cds-WP_014612802.1;Parent=gene-CYJ01_RS01570;Dbxref=GenBank:WP_014612802.1;Name=WP_014612802.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612802.1;locus_tag=CYJ01_RS01570;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014612802.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 117055 118650 . + . ID=gene-CYJ01_RS01575;Name=CYJ01_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01575;old_locus_tag=CYJ01_01575 NZ_PJUR01000002.1 Protein Homology CDS 117055 118650 . + 0 ID=cds-WP_101457149.1;Parent=gene-CYJ01_RS01575;Dbxref=GenBank:WP_101457149.1;Name=WP_101457149.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612803.1;locus_tag=CYJ01_RS01575;product=xylulokinase;protein_id=WP_101457149.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 118892 120001 . + . ID=gene-CYJ01_RS01580;Name=CYJ01_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01580;old_locus_tag=CYJ01_01580 NZ_PJUR01000002.1 Protein Homology CDS 118892 120001 . + 0 ID=cds-WP_101457150.1;Parent=gene-CYJ01_RS01580;Dbxref=GenBank:WP_101457150.1;Name=WP_101457150.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168901.1;locus_tag=CYJ01_RS01580;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101457150.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 119995 121329 . + . ID=gene-CYJ01_RS01585;Name=CYJ01_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01585;old_locus_tag=CYJ01_01585 NZ_PJUR01000002.1 Protein Homology CDS 119995 121329 . + 0 ID=cds-WP_101457151.1;Parent=gene-CYJ01_RS01585;Dbxref=GenBank:WP_101457151.1;Name=WP_101457151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729755.1;locus_tag=CYJ01_RS01585;product=nucleoside recognition domain-containing protein;protein_id=WP_101457151.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 121461 122510 . + . ID=gene-CYJ01_RS01590;Name=CYJ01_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01590;old_locus_tag=CYJ01_01590 NZ_PJUR01000002.1 Protein Homology CDS 121461 122510 . + 0 ID=cds-WP_015729754.1;Parent=gene-CYJ01_RS01590;Dbxref=GenBank:WP_015729754.1;Name=WP_015729754.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=CYJ01_RS01590;product=ABC transporter permease;protein_id=WP_015729754.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 122523 123185 . + . ID=gene-CYJ01_RS01595;Name=CYJ01_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01595;old_locus_tag=CYJ01_01595 NZ_PJUR01000002.1 Protein Homology CDS 122523 123185 . + 0 ID=cds-WP_037542118.1;Parent=gene-CYJ01_RS01595;Dbxref=GenBank:WP_037542118.1;Name=WP_037542118.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612807.1;locus_tag=CYJ01_RS01595;product=ABC transporter ATP-binding protein;protein_id=WP_037542118.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 123272 123694 . + . ID=gene-CYJ01_RS01600;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=CYJ01_RS01600;old_locus_tag=CYJ01_01600 NZ_PJUR01000002.1 Protein Homology CDS 123272 123694 . + 0 ID=cds-WP_014612808.1;Parent=gene-CYJ01_RS01600;Dbxref=GenBank:WP_014612808.1;Name=WP_014612808.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168905.1;locus_tag=CYJ01_RS01600;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_014612808.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 123695 125020 . + . ID=gene-CYJ01_RS01605;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01605;old_locus_tag=CYJ01_01605 NZ_PJUR01000002.1 Protein Homology CDS 123695 125020 . + 0 ID=cds-WP_101457152.1;Parent=gene-CYJ01_RS01605;Dbxref=GenBank:WP_101457152.1;Name=WP_101457152.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612809.1;locus_tag=CYJ01_RS01605;product=hypothiocyanous acid reductase MerA;protein_id=WP_101457152.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 125218 126006 . + . ID=gene-CYJ01_RS01610;Name=CYJ01_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01610;old_locus_tag=CYJ01_01610 NZ_PJUR01000002.1 Protein Homology CDS 125218 126006 . + 0 ID=cds-WP_101457153.1;Parent=gene-CYJ01_RS01610;Dbxref=GenBank:WP_101457153.1;Name=WP_101457153.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729750.1;locus_tag=CYJ01_RS01610;product=arylamine N-acetyltransferase family protein;protein_id=WP_101457153.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 126318 126812 . - . ID=gene-CYJ01_RS01615;Name=CYJ01_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01615;old_locus_tag=CYJ01_01615 NZ_PJUR01000002.1 Protein Homology CDS 126318 126812 . - 0 ID=cds-WP_015729749.1;Parent=gene-CYJ01_RS01615;Dbxref=GenBank:WP_015729749.1;Name=WP_015729749.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=CYJ01_RS01615;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_015729749.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 127072 128976 . + . ID=gene-CYJ01_RS01620;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ01_RS01620;old_locus_tag=CYJ01_01620 NZ_PJUR01000002.1 Protein Homology CDS 127072 128976 . + 0 ID=cds-WP_101457154.1;Parent=gene-CYJ01_RS01620;Dbxref=GenBank:WP_101457154.1;Name=WP_101457154.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219985.1;locus_tag=CYJ01_RS01620;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_101457154.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 129170 129427 . + . ID=gene-CYJ01_RS01625;Name=CYJ01_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01625;old_locus_tag=CYJ01_01625 NZ_PJUR01000002.1 Protein Homology CDS 129170 129427 . + 0 ID=cds-WP_015729747.1;Parent=gene-CYJ01_RS01625;Dbxref=GenBank:WP_015729747.1;Name=WP_015729747.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587616.1;locus_tag=CYJ01_RS01625;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_015729747.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 129427 129693 . + . ID=gene-CYJ01_RS01630;Name=CYJ01_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01630;old_locus_tag=CYJ01_01630 NZ_PJUR01000002.1 Protein Homology CDS 129427 129693 . + 0 ID=cds-WP_101457155.1;Parent=gene-CYJ01_RS01630;Dbxref=GenBank:WP_101457155.1;Name=WP_101457155.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074043.1;locus_tag=CYJ01_RS01630;product=Txe/YoeB family addiction module toxin;protein_id=WP_101457155.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 130037 130138 . - . ID=gene-CYJ01_RS01635;Name=CYJ01_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01635;old_locus_tag=CYJ01_01635 NZ_PJUR01000002.1 Protein Homology CDS 130037 130138 . - 0 ID=cds-WP_019169745.1;Parent=gene-CYJ01_RS01635;Dbxref=GenBank:WP_019169745.1;Name=WP_019169745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165094.1;locus_tag=CYJ01_RS01635;product=SE2200 family small protein;protein_id=WP_019169745.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 130152 131645 . - . ID=gene-CYJ01_RS01640;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CYJ01_RS01640;old_locus_tag=CYJ01_01640 NZ_PJUR01000002.1 Protein Homology CDS 130152 131645 . - 0 ID=cds-WP_014612817.1;Parent=gene-CYJ01_RS01640;Dbxref=GenBank:WP_014612817.1;Name=WP_014612817.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=CYJ01_RS01640;product=L-lactate dehydrogenase (quinone);protein_id=WP_014612817.1;transl_table=11 NZ_PJUR01000002.1 RefSeq gene 132402 134933 . + . ID=gene-CYJ01_RS01645;Name=CYJ01_RS01645;end_range=134933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01645;old_locus_tag=CYJ01_01645;partial=true NZ_PJUR01000002.1 Protein Homology CDS 132402 134933 . + 0 ID=cds-WP_198587992.1;Parent=gene-CYJ01_RS01645;Dbxref=GenBank:WP_198587992.1;Name=WP_198587992.1;end_range=134933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS01645;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;protein_id=WP_198587992.1;transl_table=11 ##sequence-region NZ_PJUR01000020.1 1 35063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000020.1 RefSeq region 1 35063 . + . ID=NZ_PJUR01000020.1:1..35063;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000020.1 RefSeq gene 1 479 . - . ID=gene-CYJ01_RS08320;Name=CYJ01_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08320;old_locus_tag=CYJ01_08320;partial=true;start_range=.,1 NZ_PJUR01000020.1 Protein Homology CDS 1 479 . - 0 ID=cds-WP_241900536.1;Parent=gene-CYJ01_RS08320;Dbxref=GenBank:WP_241900536.1;Name=WP_241900536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS08320;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241900536.1;start_range=.,1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 1027 1686 . - . ID=gene-CYJ01_RS08325;Name=CYJ01_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08325;old_locus_tag=CYJ01_08325 NZ_PJUR01000020.1 Protein Homology CDS 1027 1686 . - 0 ID=cds-WP_014614257.1;Parent=gene-CYJ01_RS08325;Dbxref=GenBank:WP_014614257.1;Name=WP_014614257.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=CYJ01_RS08325;product=potassium channel family protein;protein_id=WP_014614257.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 1835 2854 . - . ID=gene-CYJ01_RS08330;Name=CYJ01_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08330;old_locus_tag=CYJ01_08330 NZ_PJUR01000020.1 Protein Homology CDS 1835 2854 . - 0 ID=cds-WP_014614258.1;Parent=gene-CYJ01_RS08330;Dbxref=GenBank:WP_014614258.1;Name=WP_014614258.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=CYJ01_RS08330;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_014614258.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 2854 4197 . - . ID=gene-CYJ01_RS08335;Name=CYJ01_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08335;old_locus_tag=CYJ01_08335 NZ_PJUR01000020.1 Protein Homology CDS 2854 4197 . - 0 ID=cds-WP_014614259.1;Parent=gene-CYJ01_RS08335;Dbxref=GenBank:WP_014614259.1;Name=WP_014614259.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614259.1;locus_tag=CYJ01_RS08335;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014614259.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 4400 4633 . + . ID=gene-CYJ01_RS08340;Name=CYJ01_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08340;old_locus_tag=CYJ01_08340 NZ_PJUR01000020.1 Protein Homology CDS 4400 4633 . + 0 ID=cds-WP_014614260.1;Parent=gene-CYJ01_RS08340;Dbxref=GenBank:WP_014614260.1;Name=WP_014614260.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165586.1;locus_tag=CYJ01_RS08340;product=glutaredoxin family protein;protein_id=WP_014614260.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 4810 6531 . - . ID=gene-CYJ01_RS08345;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CYJ01_RS08345;old_locus_tag=CYJ01_08345 NZ_PJUR01000020.1 Protein Homology CDS 4810 6531 . - 0 ID=cds-WP_015728953.1;Parent=gene-CYJ01_RS08345;Dbxref=GenBank:WP_015728953.1;Name=WP_015728953.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=CYJ01_RS08345;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_015728953.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 6531 6797 . - . ID=gene-CYJ01_RS08350;Name=CYJ01_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08350;old_locus_tag=CYJ01_08350 NZ_PJUR01000020.1 Protein Homology CDS 6531 6797 . - 0 ID=cds-WP_014614262.1;Parent=gene-CYJ01_RS08350;Dbxref=GenBank:WP_014614262.1;Name=WP_014614262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=CYJ01_RS08350;product=phosphocarrier protein HPr;protein_id=WP_014614262.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 6961 7491 . - . ID=gene-CYJ01_RS08355;Name=CYJ01_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08355;old_locus_tag=CYJ01_08355 NZ_PJUR01000020.1 Protein Homology CDS 6961 7491 . - 0 ID=cds-WP_014614263.1;Parent=gene-CYJ01_RS08355;Dbxref=GenBank:WP_014614263.1;Name=WP_014614263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=CYJ01_RS08355;product=hypothetical protein;protein_id=WP_014614263.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 7552 8721 . - . ID=gene-CYJ01_RS08360;Name=CYJ01_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08360;old_locus_tag=CYJ01_08360 NZ_PJUR01000020.1 Protein Homology CDS 7552 8721 . - 0 ID=cds-WP_014614264.1;Parent=gene-CYJ01_RS08360;Dbxref=GenBank:WP_014614264.1;Name=WP_014614264.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165590.1;locus_tag=CYJ01_RS08360;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_014614264.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 8857 10188 . - . ID=gene-CYJ01_RS08365;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08365;old_locus_tag=CYJ01_08365 NZ_PJUR01000020.1 Protein Homology CDS 8857 10188 . - 0 ID=cds-WP_065354424.1;Parent=gene-CYJ01_RS08365;Dbxref=GenBank:WP_065354424.1;Name=WP_065354424.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728950.1;locus_tag=CYJ01_RS08365;product=lipoteichoic acid stability factor AuxA;protein_id=WP_065354424.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 10554 10685 . + . ID=gene-CYJ01_RS12140;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=CYJ01_RS12140 NZ_PJUR01000020.1 Protein Homology CDS 10554 10685 . + 0 ID=cds-WP_014614266.1;Parent=gene-CYJ01_RS12140;Dbxref=GenBank:WP_014614266.1;Name=WP_014614266.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=CYJ01_RS12140;product=glycopeptide resistance-associated protein GraF;protein_id=WP_014614266.1;transl_table=11 NZ_PJUR01000020.1 cmsearch riboswitch 11529 11628 . + . ID=id-NZ_PJUR01000020.1:11529..11628;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000020.1 RefSeq gene 11753 12328 . + . ID=gene-CYJ01_RS08370;Name=CYJ01_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08370;old_locus_tag=CYJ01_08370 NZ_PJUR01000020.1 Protein Homology CDS 11753 12328 . + 0 ID=cds-WP_014614267.1;Parent=gene-CYJ01_RS08370;Dbxref=GenBank:WP_014614267.1;Name=WP_014614267.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033477.1;locus_tag=CYJ01_RS08370;product=ECF transporter S component;protein_id=WP_014614267.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 12341 13744 . + . ID=gene-CYJ01_RS08375;Name=CYJ01_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08375;old_locus_tag=CYJ01_08375 NZ_PJUR01000020.1 Protein Homology CDS 12341 13744 . + 0 ID=cds-WP_015728949.1;Parent=gene-CYJ01_RS08375;Dbxref=GenBank:WP_015728949.1;Name=WP_015728949.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=CYJ01_RS08375;product=ABC transporter ATP-binding protein;protein_id=WP_015728949.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 13741 14532 . + . ID=gene-CYJ01_RS08380;Name=CYJ01_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08380;old_locus_tag=CYJ01_08380 NZ_PJUR01000020.1 Protein Homology CDS 13741 14532 . + 0 ID=cds-WP_063278785.1;Parent=gene-CYJ01_RS08380;Dbxref=GenBank:WP_063278785.1;Name=WP_063278785.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=CYJ01_RS08380;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_063278785.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 14751 16004 . - . ID=gene-CYJ01_RS08385;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08385;old_locus_tag=CYJ01_08385 NZ_PJUR01000020.1 Protein Homology CDS 14751 16004 . - 0 ID=cds-WP_065520578.1;Parent=gene-CYJ01_RS08385;Dbxref=GenBank:WP_065520578.1;Name=WP_065520578.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614270.1;locus_tag=CYJ01_RS08385;product=phosphoribosylamine--glycine ligase;protein_id=WP_065520578.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 16022 17500 . - . ID=gene-CYJ01_RS08390;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CYJ01_RS08390;old_locus_tag=CYJ01_08390 NZ_PJUR01000020.1 Protein Homology CDS 16022 17500 . - 0 ID=cds-WP_063284641.1;Parent=gene-CYJ01_RS08390;Dbxref=GenBank:WP_063284641.1;Name=WP_063284641.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=CYJ01_RS08390;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_063284641.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 17517 18083 . - . ID=gene-CYJ01_RS08395;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CYJ01_RS08395;old_locus_tag=CYJ01_08395 NZ_PJUR01000020.1 Protein Homology CDS 17517 18083 . - 0 ID=cds-WP_037543346.1;Parent=gene-CYJ01_RS08395;Dbxref=GenBank:WP_037543346.1;Name=WP_037543346.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=CYJ01_RS08395;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037543346.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 18083 19114 . - . ID=gene-CYJ01_RS08400;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CYJ01_RS08400;old_locus_tag=CYJ01_08400 NZ_PJUR01000020.1 Protein Homology CDS 18083 19114 . - 0 ID=cds-WP_065354425.1;Parent=gene-CYJ01_RS08400;Dbxref=GenBank:WP_065354425.1;Name=WP_065354425.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276159.1;locus_tag=CYJ01_RS08400;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_065354425.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 19118 20539 . - . ID=gene-CYJ01_RS08405;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CYJ01_RS08405;old_locus_tag=CYJ01_08405 NZ_PJUR01000020.1 Protein Homology CDS 19118 20539 . - 0 ID=cds-WP_014614274.1;Parent=gene-CYJ01_RS08405;Dbxref=GenBank:WP_014614274.1;Name=WP_014614274.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=CYJ01_RS08405;product=amidophosphoribosyltransferase;protein_id=WP_014614274.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 20518 22707 . - . ID=gene-CYJ01_RS08410;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CYJ01_RS08410;old_locus_tag=CYJ01_08410 NZ_PJUR01000020.1 Protein Homology CDS 20518 22707 . - 0 ID=cds-WP_101431666.1;Parent=gene-CYJ01_RS08410;Dbxref=GenBank:WP_101431666.1;Name=WP_101431666.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=CYJ01_RS08410;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_101431666.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 22700 23371 . - . ID=gene-CYJ01_RS08415;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS08415;old_locus_tag=CYJ01_08415 NZ_PJUR01000020.1 Protein Homology CDS 22700 23371 . - 0 ID=cds-WP_101457454.1;Parent=gene-CYJ01_RS08415;Dbxref=GenBank:WP_101457454.1;Name=WP_101457454.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167837.1;locus_tag=CYJ01_RS08415;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_101457454.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 23373 23633 . - . ID=gene-CYJ01_RS08420;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=CYJ01_RS08420;old_locus_tag=CYJ01_08420 NZ_PJUR01000020.1 Protein Homology CDS 23373 23633 . - 0 ID=cds-WP_014614277.1;Parent=gene-CYJ01_RS08420;Dbxref=GenBank:WP_014614277.1;Name=WP_014614277.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=CYJ01_RS08420;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_014614277.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 23636 24337 . - . ID=gene-CYJ01_RS08425;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08425;old_locus_tag=CYJ01_08425 NZ_PJUR01000020.1 Protein Homology CDS 23636 24337 . - 0 ID=cds-WP_014614278.1;Parent=gene-CYJ01_RS08425;Dbxref=GenBank:WP_014614278.1;Name=WP_014614278.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303439.1;locus_tag=CYJ01_RS08425;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014614278.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 24334 25467 . - . ID=gene-CYJ01_RS08430;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CYJ01_RS08430;old_locus_tag=CYJ01_08430 NZ_PJUR01000020.1 Protein Homology CDS 24334 25467 . - 0 ID=cds-WP_070407582.1;Parent=gene-CYJ01_RS08430;Dbxref=GenBank:WP_070407582.1;Name=WP_070407582.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728942.1;locus_tag=CYJ01_RS08430;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_070407582.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 25454 25936 . - . ID=gene-CYJ01_RS08435;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CYJ01_RS08435;old_locus_tag=CYJ01_08435 NZ_PJUR01000020.1 Protein Homology CDS 25454 25936 . - 0 ID=cds-WP_014614280.1;Parent=gene-CYJ01_RS08435;Dbxref=GenBank:WP_014614280.1;Name=WP_014614280.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=CYJ01_RS08435;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_014614280.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 26146 27003 . + . ID=gene-CYJ01_RS08440;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08440;old_locus_tag=CYJ01_08440 NZ_PJUR01000020.1 Protein Homology CDS 26146 27003 . + 0 ID=cds-WP_014614281.1;Parent=gene-CYJ01_RS08440;Dbxref=GenBank:WP_014614281.1;Name=WP_014614281.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=CYJ01_RS08440;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_014614281.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 27313 28458 . - . ID=gene-CYJ01_RS08445;Name=CYJ01_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08445;old_locus_tag=CYJ01_08445 NZ_PJUR01000020.1 Protein Homology CDS 27313 28458 . - 0 ID=cds-WP_014614282.1;Parent=gene-CYJ01_RS08445;Dbxref=GenBank:WP_014614282.1;Name=WP_014614282.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=CYJ01_RS08445;product=globin domain-containing protein;protein_id=WP_014614282.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 28686 29021 . + . ID=gene-CYJ01_RS08450;Name=CYJ01_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08450;old_locus_tag=CYJ01_08450 NZ_PJUR01000020.1 Protein Homology CDS 28686 29021 . + 0 ID=cds-WP_014614283.1;Parent=gene-CYJ01_RS08450;Dbxref=GenBank:WP_014614283.1;Name=WP_014614283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=CYJ01_RS08450;product=DUF5011 domain-containing protein;protein_id=WP_014614283.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 29522 30622 . + . ID=gene-CYJ01_RS08455;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08455;old_locus_tag=CYJ01_08455 NZ_PJUR01000020.1 Protein Homology CDS 29522 30622 . + 0 ID=cds-WP_014614285.1;Parent=gene-CYJ01_RS08455;Dbxref=GenBank:WP_014614285.1;Name=WP_014614285.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614285.1;locus_tag=CYJ01_RS08455;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_014614285.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 30625 32613 . + . ID=gene-CYJ01_RS08460;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08460;old_locus_tag=CYJ01_08460 NZ_PJUR01000020.1 Protein Homology CDS 30625 32613 . + 0 ID=cds-WP_031253657.1;Parent=gene-CYJ01_RS08460;Dbxref=GenBank:WP_031253657.1;Name=WP_031253657.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CYJ01_RS08460;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_031253657.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 32603 33211 . + . ID=gene-CYJ01_RS08465;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08465;old_locus_tag=CYJ01_08465 NZ_PJUR01000020.1 Protein Homology CDS 32603 33211 . + 0 ID=cds-WP_014614287.1;Parent=gene-CYJ01_RS08465;Dbxref=GenBank:WP_014614287.1;Name=WP_014614287.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CYJ01_RS08465;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_014614287.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 33208 33498 . + . ID=gene-CYJ01_RS08470;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08470;old_locus_tag=CYJ01_08470 NZ_PJUR01000020.1 Protein Homology CDS 33208 33498 . + 0 ID=cds-WP_014614288.1;Parent=gene-CYJ01_RS08470;Dbxref=GenBank:WP_014614288.1;Name=WP_014614288.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=CYJ01_RS08470;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_014614288.1;transl_table=11 NZ_PJUR01000020.1 RefSeq gene 33679 34584 . + . ID=gene-CYJ01_RS08475;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08475;old_locus_tag=CYJ01_08475 NZ_PJUR01000020.1 Protein Homology CDS 33679 34584 . + 0 ID=cds-WP_015728941.1;Parent=gene-CYJ01_RS08475;Dbxref=GenBank:WP_015728941.1;Name=WP_015728941.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728941.1;locus_tag=CYJ01_RS08475;product=ribonucleoside hydrolase RihC;protein_id=WP_015728941.1;transl_table=11 ##sequence-region NZ_PJUR01000021.1 1 51658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000021.1 RefSeq region 1 51658 . + . ID=NZ_PJUR01000021.1:1..51658;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000021.1 RefSeq gene 523 1587 . - . ID=gene-CYJ01_RS08480;Name=CYJ01_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08480;old_locus_tag=CYJ01_08480 NZ_PJUR01000021.1 Protein Homology CDS 523 1587 . - 0 ID=cds-WP_065520406.1;Parent=gene-CYJ01_RS08480;Dbxref=GenBank:WP_065520406.1;Name=WP_065520406.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=CYJ01_RS08480;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_065520406.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 1906 3354 . - . ID=gene-CYJ01_RS08485;Name=CYJ01_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08485;old_locus_tag=CYJ01_08485 NZ_PJUR01000021.1 Protein Homology CDS 1906 3354 . - 0 ID=cds-WP_101457455.1;Parent=gene-CYJ01_RS08485;Dbxref=GenBank:WP_101457455.1;Name=WP_101457455.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ01_RS08485;product=MDR family MFS transporter;protein_id=WP_101457455.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 3460 3921 . - . ID=gene-CYJ01_RS08490;Name=CYJ01_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08490;old_locus_tag=CYJ01_08490 NZ_PJUR01000021.1 Protein Homology CDS 3460 3921 . - 0 ID=cds-WP_014613283.1;Parent=gene-CYJ01_RS08490;Dbxref=GenBank:WP_014613283.1;Name=WP_014613283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168476.1;locus_tag=CYJ01_RS08490;product=SepA family multidrug efflux transporter;protein_id=WP_014613283.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 3947 5290 . - . ID=gene-CYJ01_RS08495;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=CYJ01_RS08495;old_locus_tag=CYJ01_08495 NZ_PJUR01000021.1 Protein Homology CDS 3947 5290 . - 0 ID=cds-WP_063279141.1;Parent=gene-CYJ01_RS08495;Dbxref=GenBank:WP_063279141.1;Name=WP_063279141.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165088.1;locus_tag=CYJ01_RS08495;product=multidrug efflux MFS transporter SdrM;protein_id=WP_063279141.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 5843 6040 . - . ID=gene-CYJ01_RS08500;Name=CYJ01_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08500;old_locus_tag=CYJ01_08500 NZ_PJUR01000021.1 Protein Homology CDS 5843 6040 . - 0 ID=cds-WP_014613281.1;Parent=gene-CYJ01_RS08500;Dbxref=GenBank:WP_014613281.1;Name=WP_014613281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729476.1;locus_tag=CYJ01_RS08500;product=hypothetical protein;protein_id=WP_014613281.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 6053 6733 . - . ID=gene-CYJ01_RS08505;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08505;old_locus_tag=CYJ01_08505 NZ_PJUR01000021.1 Protein Homology CDS 6053 6733 . - 0 ID=cds-WP_014613280.1;Parent=gene-CYJ01_RS08505;Dbxref=GenBank:WP_014613280.1;Name=WP_014613280.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=CYJ01_RS08505;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_014613280.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 6744 7934 . - . ID=gene-CYJ01_RS08510;Name=CYJ01_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08510;old_locus_tag=CYJ01_08510 NZ_PJUR01000021.1 Protein Homology CDS 6744 7934 . - 0 ID=cds-WP_014613279.1;Parent=gene-CYJ01_RS08510;Dbxref=GenBank:WP_014613279.1;Name=WP_014613279.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613279.1;locus_tag=CYJ01_RS08510;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_014613279.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 8007 8513 . - . ID=gene-CYJ01_RS08515;Name=CYJ01_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08515;old_locus_tag=CYJ01_08515 NZ_PJUR01000021.1 Protein Homology CDS 8007 8513 . - 0 ID=cds-WP_014613278.1;Parent=gene-CYJ01_RS08515;Dbxref=GenBank:WP_014613278.1;Name=WP_014613278.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=CYJ01_RS08515;product=metal-dependent hydrolase;protein_id=WP_014613278.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 8703 8963 . + . ID=gene-CYJ01_RS08520;Name=CYJ01_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08520;old_locus_tag=CYJ01_08520 NZ_PJUR01000021.1 Protein Homology CDS 8703 8963 . + 0 ID=cds-WP_014613277.1;Parent=gene-CYJ01_RS08520;Dbxref=GenBank:WP_014613277.1;Name=WP_014613277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722958.1;locus_tag=CYJ01_RS08520;product=SunI/YnzG family protein;protein_id=WP_014613277.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 9447 10817 . - . ID=gene-CYJ01_RS08525;Name=CYJ01_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08525;old_locus_tag=CYJ01_08525 NZ_PJUR01000021.1 Protein Homology CDS 9447 10817 . - 0 ID=cds-WP_014613276.1;Parent=gene-CYJ01_RS08525;Dbxref=GenBank:WP_014613276.1;Name=WP_014613276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613276.1;locus_tag=CYJ01_RS08525;product=YjiH family protein;protein_id=WP_014613276.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 10938 11900 . - . ID=gene-CYJ01_RS08530;Name=CYJ01_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08530;old_locus_tag=CYJ01_08530 NZ_PJUR01000021.1 Protein Homology CDS 10938 11900 . - 0 ID=cds-WP_101457456.1;Parent=gene-CYJ01_RS08530;Dbxref=GenBank:WP_101457456.1;Name=WP_101457456.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613275.1;locus_tag=CYJ01_RS08530;product=FecCD family ABC transporter permease;protein_id=WP_101457456.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 11897 12922 . - . ID=gene-CYJ01_RS08535;Name=CYJ01_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08535;old_locus_tag=CYJ01_08535 NZ_PJUR01000021.1 Protein Homology CDS 11897 12922 . - 0 ID=cds-WP_014613274.1;Parent=gene-CYJ01_RS08535;Dbxref=GenBank:WP_014613274.1;Name=WP_014613274.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165080.1;locus_tag=CYJ01_RS08535;product=FecCD family ABC transporter permease;protein_id=WP_014613274.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 13066 14055 . - . ID=gene-CYJ01_RS08540;Name=CYJ01_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08540;old_locus_tag=CYJ01_08540 NZ_PJUR01000021.1 Protein Homology CDS 13066 14055 . - 0 ID=cds-WP_014613273.1;Parent=gene-CYJ01_RS08540;Dbxref=GenBank:WP_014613273.1;Name=WP_014613273.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168333.1;locus_tag=CYJ01_RS08540;product=ABC transporter substrate-binding protein;protein_id=WP_014613273.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 14125 15201 . - . ID=gene-CYJ01_RS08545;Name=CYJ01_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08545;old_locus_tag=CYJ01_08545 NZ_PJUR01000021.1 Protein Homology CDS 14125 15201 . - 0 ID=cds-WP_015729484.1;Parent=gene-CYJ01_RS08545;Dbxref=GenBank:WP_015729484.1;Name=WP_015729484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=CYJ01_RS08545;product=alanine racemase;protein_id=WP_015729484.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 15205 16968 . - . ID=gene-CYJ01_RS08550;Name=CYJ01_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08550;old_locus_tag=CYJ01_08550 NZ_PJUR01000021.1 Protein Homology CDS 15205 16968 . - 0 ID=cds-WP_101457457.1;Parent=gene-CYJ01_RS08550;Dbxref=GenBank:WP_101457457.1;Name=WP_101457457.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=CYJ01_RS08550;product=IucA/IucC family protein;protein_id=WP_101457457.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 16952 18136 . - . ID=gene-CYJ01_RS08555;Name=CYJ01_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08555;old_locus_tag=CYJ01_08555 NZ_PJUR01000021.1 Protein Homology CDS 16952 18136 . - 0 ID=cds-WP_014613270.1;Parent=gene-CYJ01_RS08555;Dbxref=GenBank:WP_014613270.1;Name=WP_014613270.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613270.1;locus_tag=CYJ01_RS08555;product=MFS transporter;protein_id=WP_014613270.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 18237 20204 . + . ID=gene-CYJ01_RS08560;Name=CYJ01_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08560;old_locus_tag=CYJ01_08560 NZ_PJUR01000021.1 Protein Homology CDS 18237 20204 . + 0 ID=cds-WP_101457458.1;Parent=gene-CYJ01_RS08560;Dbxref=GenBank:WP_101457458.1;Name=WP_101457458.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729487.1;locus_tag=CYJ01_RS08560;product=IucA/IucC family protein;protein_id=WP_101457458.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 20316 21461 . + . ID=gene-CYJ01_RS08565;Name=CYJ01_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08565;old_locus_tag=CYJ01_08565 NZ_PJUR01000021.1 Protein Homology CDS 20316 21461 . + 0 ID=cds-WP_014613268.1;Parent=gene-CYJ01_RS08565;Dbxref=GenBank:WP_014613268.1;Name=WP_014613268.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613268.1;locus_tag=CYJ01_RS08565;product=MFS transporter;protein_id=WP_014613268.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 21533 22024 . - . ID=gene-CYJ01_RS08570;Name=CYJ01_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08570;old_locus_tag=CYJ01_08570 NZ_PJUR01000021.1 Protein Homology CDS 21533 22024 . - 0 ID=cds-WP_014613267.1;Parent=gene-CYJ01_RS08570;Dbxref=GenBank:WP_014613267.1;Name=WP_014613267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CYJ01_RS08570;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613267.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 22078 22323 . - . ID=gene-CYJ01_RS08575;Name=CYJ01_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08575;old_locus_tag=CYJ01_08575 NZ_PJUR01000021.1 Protein Homology CDS 22078 22323 . - 0 ID=cds-WP_101457459.1;Parent=gene-CYJ01_RS08575;Dbxref=GenBank:WP_101457459.1;Name=WP_101457459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426388.1;locus_tag=CYJ01_RS08575;product=DUF2273 domain-containing protein;protein_id=WP_101457459.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 22336 22878 . - . ID=gene-CYJ01_RS08580;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=CYJ01_RS08580;old_locus_tag=CYJ01_08580 NZ_PJUR01000021.1 Protein Homology CDS 22336 22878 . - 0 ID=cds-WP_063284742.1;Parent=gene-CYJ01_RS08580;Dbxref=GenBank:WP_063284742.1;Name=WP_063284742.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=CYJ01_RS08580;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_063284742.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 23167 24681 . - . ID=gene-CYJ01_RS08585;Name=CYJ01_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08585;old_locus_tag=CYJ01_08585 NZ_PJUR01000021.1 Protein Homology CDS 23167 24681 . - 0 ID=cds-WP_101457461.1;Parent=gene-CYJ01_RS08585;Dbxref=GenBank:WP_101457461.1;Name=WP_101457461.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169143.1;locus_tag=CYJ01_RS08585;product=BCCT family transporter;protein_id=WP_101457461.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 24738 25748 . - . ID=gene-CYJ01_RS08590;Name=CYJ01_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08590;old_locus_tag=CYJ01_08590 NZ_PJUR01000021.1 Protein Homology CDS 24738 25748 . - 0 ID=cds-WP_101457462.1;Parent=gene-CYJ01_RS08590;Dbxref=GenBank:WP_101457462.1;Name=WP_101457462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=CYJ01_RS08590;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_101457462.1;transl_table=11 NZ_PJUR01000021.1 RefSeq direct_repeat 25916 27591 . + . ID=id-NZ_PJUR01000021.1:25916..27591;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=25916..25951;rpt_unit_seq=gttttacttctttctaaataaacatagtgctaaaac NZ_PJUR01000021.1 RefSeq gene 27772 28620 . - . ID=gene-CYJ01_RS08595;Name=CYJ01_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08595;old_locus_tag=CYJ01_08595 NZ_PJUR01000021.1 Protein Homology CDS 27772 28620 . - 0 ID=cds-WP_014613262.1;Parent=gene-CYJ01_RS08595;Dbxref=GenBank:WP_014613262.1;Name=WP_014613262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613262.1;locus_tag=CYJ01_RS08595;product=hypothetical protein;protein_id=WP_014613262.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 28617 28910 . - . ID=gene-CYJ01_RS08600;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CYJ01_RS08600;old_locus_tag=CYJ01_08600 NZ_PJUR01000021.1 Protein Homology CDS 28617 28910 . - 0 ID=cds-WP_014613261.1;Parent=gene-CYJ01_RS08600;Dbxref=GenBank:WP_014613261.1;Name=WP_014613261.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01573.1;locus_tag=CYJ01_RS08600;product=CRISPR-associated endonuclease Cas2;protein_id=WP_014613261.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 28991 29866 . - . ID=gene-CYJ01_RS08605;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=CYJ01_RS08605;old_locus_tag=CYJ01_08605 NZ_PJUR01000021.1 Protein Homology CDS 28991 29866 . - 0 ID=cds-WP_063284666.1;Parent=gene-CYJ01_RS08605;Dbxref=GenBank:WP_063284666.1;Name=WP_063284666.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613260.1;locus_tag=CYJ01_RS08605;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_063284666.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 29856 33860 . - . ID=gene-CYJ01_RS08610;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=CYJ01_RS08610;old_locus_tag=CYJ01_08610 NZ_PJUR01000021.1 Protein Homology CDS 29856 33860 . - 0 ID=cds-WP_101457463.1;Parent=gene-CYJ01_RS08610;Dbxref=GenBank:WP_101457463.1;Name=WP_101457463.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613259.1;locus_tag=CYJ01_RS08610;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_101457463.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 34090 35496 . - . ID=gene-CYJ01_RS08615;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=CYJ01_RS08615;old_locus_tag=CYJ01_08615 NZ_PJUR01000021.1 Protein Homology CDS 34090 35496 . - 0 ID=cds-WP_101457464.1;Parent=gene-CYJ01_RS08615;Dbxref=GenBank:WP_101457464.1;Name=WP_101457464.1;Ontology_term=GO:0019512,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275160.1;locus_tag=CYJ01_RS08615;product=6-phospho-beta-galactosidase;protein_id=WP_101457464.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 35514 37238 . - . ID=gene-CYJ01_RS08620;Name=CYJ01_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08620;old_locus_tag=CYJ01_08620 NZ_PJUR01000021.1 Protein Homology CDS 35514 37238 . - 0 ID=cds-WP_101457465.1;Parent=gene-CYJ01_RS08620;Dbxref=GenBank:WP_101457465.1;Name=WP_101457465.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=CYJ01_RS08620;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_101457465.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 37244 37558 . - . ID=gene-CYJ01_RS08625;Name=CYJ01_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08625;old_locus_tag=CYJ01_08625 NZ_PJUR01000021.1 Protein Homology CDS 37244 37558 . - 0 ID=cds-WP_014613256.1;Parent=gene-CYJ01_RS08625;Dbxref=GenBank:WP_014613256.1;Name=WP_014613256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=CYJ01_RS08625;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_014613256.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 37584 38552 . - . ID=gene-CYJ01_RS08630;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08630;old_locus_tag=CYJ01_08630 NZ_PJUR01000021.1 Protein Homology CDS 37584 38552 . - 0 ID=cds-WP_096636655.1;Parent=gene-CYJ01_RS08630;Dbxref=GenBank:WP_096636655.1;Name=WP_096636655.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=CYJ01_RS08630;product=tagatose-bisphosphate aldolase;protein_id=WP_096636655.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 38623 39138 . - . ID=gene-CYJ01_RS08635;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08635;old_locus_tag=CYJ01_08635 NZ_PJUR01000021.1 Protein Homology CDS 38623 39138 . - 0 ID=cds-WP_014613254.1;Parent=gene-CYJ01_RS08635;Dbxref=GenBank:WP_014613254.1;Name=WP_014613254.1;Ontology_term=GO:0019512,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CYJ01_RS08635;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_014613254.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 39154 39582 . - . ID=gene-CYJ01_RS08640;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08640;old_locus_tag=CYJ01_08640 NZ_PJUR01000021.1 Protein Homology CDS 39154 39582 . - 0 ID=cds-WP_014613253.1;Parent=gene-CYJ01_RS08640;Dbxref=GenBank:WP_014613253.1;Name=WP_014613253.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=CYJ01_RS08640;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_014613253.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 39787 40539 . - . ID=gene-CYJ01_RS08645;Name=CYJ01_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08645;old_locus_tag=CYJ01_08645 NZ_PJUR01000021.1 Protein Homology CDS 39787 40539 . - 0 ID=cds-WP_014613252.1;Parent=gene-CYJ01_RS08645;Dbxref=GenBank:WP_014613252.1;Name=WP_014613252.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=CYJ01_RS08645;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014613252.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 40696 43530 . - . ID=gene-CYJ01_RS08650;Name=CYJ01_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08650;old_locus_tag=CYJ01_08650 NZ_PJUR01000021.1 Protein Homology CDS 40696 43530 . - 0 ID=cds-WP_065520395.1;Parent=gene-CYJ01_RS08650;Dbxref=GenBank:WP_065520395.1;Name=WP_065520395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047202.3;locus_tag=CYJ01_RS08650;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_065520395.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 43811 44362 . - . ID=gene-CYJ01_RS08655;Name=CYJ01_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08655;old_locus_tag=CYJ01_08655 NZ_PJUR01000021.1 Protein Homology CDS 43811 44362 . - 0 ID=cds-WP_230493238.1;Parent=gene-CYJ01_RS08655;Dbxref=GenBank:WP_230493238.1;Name=WP_230493238.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729500.1;locus_tag=CYJ01_RS08655;product=MFS transporter;protein_id=WP_230493238.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 44536 44970 . - . ID=gene-CYJ01_RS08660;Name=CYJ01_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08660;old_locus_tag=CYJ01_08660 NZ_PJUR01000021.1 GeneMarkS-2+ CDS 44536 44970 . - 0 ID=cds-WP_020219634.1;Parent=gene-CYJ01_RS08660;Dbxref=GenBank:WP_020219634.1;Name=WP_020219634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS08660;product=hypothetical protein;protein_id=WP_020219634.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 45436 46515 . - . ID=gene-CYJ01_RS08665;Name=CYJ01_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08665;old_locus_tag=CYJ01_08665 NZ_PJUR01000021.1 Protein Homology CDS 45436 46515 . - 0 ID=cds-WP_172425810.1;Parent=gene-CYJ01_RS08665;Dbxref=GenBank:WP_172425810.1;Name=WP_172425810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.7;locus_tag=CYJ01_RS08665;product=RES family NAD+ phosphorylase;protein_id=WP_172425810.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 46521 47441 . - . ID=gene-CYJ01_RS08670;Name=CYJ01_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08670;old_locus_tag=CYJ01_08670 NZ_PJUR01000021.1 Protein Homology CDS 46521 47441 . - 0 ID=cds-WP_037542453.1;Parent=gene-CYJ01_RS08670;Dbxref=GenBank:WP_037542453.1;Name=WP_037542453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033831.1;locus_tag=CYJ01_RS08670;product=sce7725 family protein;protein_id=WP_037542453.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 47416 48309 . - . ID=gene-CYJ01_RS08675;Name=CYJ01_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08675;old_locus_tag=CYJ01_08675 NZ_PJUR01000021.1 Protein Homology CDS 47416 48309 . - 0 ID=cds-WP_225550139.1;Parent=gene-CYJ01_RS08675;Dbxref=GenBank:WP_225550139.1;Name=WP_225550139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166631.1;locus_tag=CYJ01_RS08675;product=sce7726 family protein;protein_id=WP_225550139.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 48470 49015 . + . ID=gene-CYJ01_RS08680;Name=CYJ01_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08680;old_locus_tag=CYJ01_08680 NZ_PJUR01000021.1 Protein Homology CDS 48470 49015 . + 0 ID=cds-WP_101457466.1;Parent=gene-CYJ01_RS08680;Dbxref=GenBank:WP_101457466.1;Name=WP_101457466.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219632.1;locus_tag=CYJ01_RS08680;product=cysteine hydrolase family protein;protein_id=WP_101457466.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 49305 49394 . - . ID=gene-CYJ01_RS12520;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ01_RS12520 NZ_PJUR01000021.1 Protein Homology CDS 49305 49394 . - 0 ID=cds-WP_110148278.1;Parent=gene-CYJ01_RS12520;Dbxref=GenBank:WP_110148278.1;Name=WP_110148278.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012598.7;locus_tag=CYJ01_RS12520;product=30S ribosomal protein S9;protein_id=WP_110148278.1;transl_table=11 NZ_PJUR01000021.1 RefSeq gene 49980 51416 . - . ID=gene-CYJ01_RS08690;Name=CYJ01_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08690;old_locus_tag=CYJ01_08690 NZ_PJUR01000021.1 Protein Homology CDS 49980 51416 . - 0 ID=cds-WP_101457467.1;Parent=gene-CYJ01_RS08690;Dbxref=GenBank:WP_101457467.1;Name=WP_101457467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204270.1;locus_tag=CYJ01_RS08690;product=ATP-binding protein;protein_id=WP_101457467.1;transl_table=11 NZ_PJUR01000021.1 RefSeq pseudogene 51517 51658 . - . ID=gene-CYJ01_RS08695;Name=CYJ01_RS08695;end_range=51658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS08695;old_locus_tag=CYJ01_08695;partial=true;pseudo=true;start_range=.,51517 NZ_PJUR01000021.1 Protein Homology CDS 51517 51658 . - 1 ID=cds-CYJ01_RS08695;Parent=gene-CYJ01_RS08695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS08695;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,51517;transl_table=11 ##sequence-region NZ_PJUR01000022.1 1 34150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000022.1 RefSeq region 1 34150 . + . ID=NZ_PJUR01000022.1:1..34150;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000022.1 RefSeq gene 1 2401 . - . ID=gene-CYJ01_RS08700;Name=CYJ01_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08700;old_locus_tag=CYJ01_08700;partial=true;start_range=.,1 NZ_PJUR01000022.1 Protein Homology CDS 1 2401 . - 0 ID=cds-WP_133121615.1;Parent=gene-CYJ01_RS08700;Dbxref=GenBank:WP_133121615.1;Name=WP_133121615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ01_RS08700;partial=true;product=YPDG domain-containing protein;protein_id=WP_133121615.1;start_range=.,1;transl_table=11 NZ_PJUR01000022.1 RefSeq pseudogene 4344 4733 . - . ID=gene-CYJ01_RS08705;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=CYJ01_RS08705;old_locus_tag=CYJ01_08705;pseudo=true NZ_PJUR01000022.1 Protein Homology CDS 4344 4733 . - 0 ID=cds-CYJ01_RS08705;Parent=gene-CYJ01_RS08705;Note=internal stop;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=CYJ01_RS08705;product=D-ribose pyranase;pseudo=true;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 4726 5610 . - . ID=gene-CYJ01_RS08710;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CYJ01_RS08710;old_locus_tag=CYJ01_08710 NZ_PJUR01000022.1 Protein Homology CDS 4726 5610 . - 0 ID=cds-WP_101457468.1;Parent=gene-CYJ01_RS08710;Dbxref=GenBank:WP_101457468.1;Name=WP_101457468.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612840.1;locus_tag=CYJ01_RS08710;product=ribokinase;protein_id=WP_101457468.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 5610 6581 . - . ID=gene-CYJ01_RS08715;Name=CYJ01_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08715;old_locus_tag=CYJ01_08715 NZ_PJUR01000022.1 Protein Homology CDS 5610 6581 . - 0 ID=cds-WP_101457469.1;Parent=gene-CYJ01_RS08715;Dbxref=GenBank:WP_101457469.1;Name=WP_101457469.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=CYJ01_RS08715;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_101457469.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 6851 7366 . + . ID=gene-CYJ01_RS08720;Name=CYJ01_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08720;old_locus_tag=CYJ01_08720 NZ_PJUR01000022.1 Protein Homology CDS 6851 7366 . + 0 ID=cds-WP_101457470.1;Parent=gene-CYJ01_RS08720;Dbxref=GenBank:WP_101457470.1;Name=WP_101457470.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167112.1;locus_tag=CYJ01_RS08720;product=peroxiredoxin family protein;protein_id=WP_101457470.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 7705 8160 . - . ID=gene-CYJ01_RS08725;Name=CYJ01_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08725;old_locus_tag=CYJ01_08725 NZ_PJUR01000022.1 Protein Homology CDS 7705 8160 . - 0 ID=cds-WP_020220171.1;Parent=gene-CYJ01_RS08725;Dbxref=GenBank:WP_020220171.1;Name=WP_020220171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220171.1;locus_tag=CYJ01_RS08725;product=P-loop NTPase family protein;protein_id=WP_020220171.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 8387 8899 . + . ID=gene-CYJ01_RS08730;Name=CYJ01_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08730;old_locus_tag=CYJ01_08730 NZ_PJUR01000022.1 Protein Homology CDS 8387 8899 . + 0 ID=cds-WP_014612836.1;Parent=gene-CYJ01_RS08730;Dbxref=GenBank:WP_014612836.1;Name=WP_014612836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171926.1;locus_tag=CYJ01_RS08730;product=DUF4242 domain-containing protein;protein_id=WP_014612836.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 9070 9810 . + . ID=gene-CYJ01_RS08735;Name=CYJ01_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08735;old_locus_tag=CYJ01_08735 NZ_PJUR01000022.1 Protein Homology CDS 9070 9810 . + 0 ID=cds-WP_101457471.1;Parent=gene-CYJ01_RS08735;Dbxref=GenBank:WP_101457471.1;Name=WP_101457471.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590849.1;locus_tag=CYJ01_RS08735;product=ABC transporter ATP-binding protein;protein_id=WP_101457471.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 9824 10771 . + . ID=gene-CYJ01_RS08740;Name=CYJ01_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08740;old_locus_tag=CYJ01_08740 NZ_PJUR01000022.1 Protein Homology CDS 9824 10771 . + 0 ID=cds-WP_101457472.1;Parent=gene-CYJ01_RS08740;Dbxref=GenBank:WP_101457472.1;Name=WP_101457472.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612834.1;locus_tag=CYJ01_RS08740;product=ABC transporter substrate-binding protein;protein_id=WP_101457472.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 10777 11541 . + . ID=gene-CYJ01_RS08745;Name=CYJ01_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08745;old_locus_tag=CYJ01_08745 NZ_PJUR01000022.1 Protein Homology CDS 10777 11541 . + 0 ID=cds-WP_037542150.1;Parent=gene-CYJ01_RS08745;Dbxref=GenBank:WP_037542150.1;Name=WP_037542150.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729730.1;locus_tag=CYJ01_RS08745;product=ABC transporter permease;protein_id=WP_037542150.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 11561 12604 . + . ID=gene-CYJ01_RS08750;Name=CYJ01_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08750;old_locus_tag=CYJ01_08750 NZ_PJUR01000022.1 Protein Homology CDS 11561 12604 . + 0 ID=cds-WP_101457473.1;Parent=gene-CYJ01_RS08750;Dbxref=GenBank:WP_101457473.1;Name=WP_101457473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612832.1;locus_tag=CYJ01_RS08750;product=acyl-CoA dehydrogenase family protein;protein_id=WP_101457473.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 12949 14121 . + . ID=gene-CYJ01_RS08755;Name=CYJ01_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08755;old_locus_tag=CYJ01_08755 NZ_PJUR01000022.1 Protein Homology CDS 12949 14121 . + 0 ID=cds-WP_014612831.1;Parent=gene-CYJ01_RS08755;Dbxref=GenBank:WP_014612831.1;Name=WP_014612831.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729733.1;locus_tag=CYJ01_RS08755;product=MFS transporter;protein_id=WP_014612831.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 14409 15980 . + . ID=gene-CYJ01_RS08760;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=CYJ01_RS08760;old_locus_tag=CYJ01_08760 NZ_PJUR01000022.1 Protein Homology CDS 14409 15980 . + 0 ID=cds-WP_101457474.1;Parent=gene-CYJ01_RS08760;Dbxref=GenBank:WP_101457474.1;Name=WP_101457474.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729734.1;locus_tag=CYJ01_RS08760;product=fatty acid degradation protein FadX;protein_id=WP_101457474.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 15999 17513 . + . ID=gene-CYJ01_RS08765;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08765;old_locus_tag=CYJ01_08765 NZ_PJUR01000022.1 Protein Homology CDS 15999 17513 . + 0 ID=cds-WP_015729735.1;Parent=gene-CYJ01_RS08765;Dbxref=GenBank:WP_015729735.1;Name=WP_015729735.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612829.1;locus_tag=CYJ01_RS08765;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_015729735.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 17550 18761 . + . ID=gene-CYJ01_RS08770;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CYJ01_RS08770;old_locus_tag=CYJ01_08770 NZ_PJUR01000022.1 Protein Homology CDS 17550 18761 . + 0 ID=cds-WP_070407513.1;Parent=gene-CYJ01_RS08770;Dbxref=GenBank:WP_070407513.1;Name=WP_070407513.1;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167102.1;locus_tag=CYJ01_RS08770;product=acyl-CoA dehydrogenase FadE;protein_id=WP_070407513.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 18807 21068 . + . ID=gene-CYJ01_RS08775;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08775;old_locus_tag=CYJ01_08775 NZ_PJUR01000022.1 Protein Homology CDS 18807 21068 . + 0 ID=cds-WP_101457475.1;Parent=gene-CYJ01_RS08775;Dbxref=GenBank:WP_101457475.1;Name=WP_101457475.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612827.1;locus_tag=CYJ01_RS08775;product=3-hydroxyacyl-CoA dehydrogenase/crotonase FadB;protein_id=WP_101457475.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 21092 22273 . + . ID=gene-CYJ01_RS08780;Name=CYJ01_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08780;old_locus_tag=CYJ01_08780 NZ_PJUR01000022.1 Protein Homology CDS 21092 22273 . + 0 ID=cds-WP_014612826.1;Parent=gene-CYJ01_RS08780;Dbxref=GenBank:WP_014612826.1;Name=WP_014612826.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612826.1;locus_tag=CYJ01_RS08780;product=thiolase family protein;protein_id=WP_014612826.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 22335 23666 . - . ID=gene-CYJ01_RS08785;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08785;old_locus_tag=CYJ01_08785 NZ_PJUR01000022.1 Protein Homology CDS 22335 23666 . - 0 ID=cds-WP_020220167.1;Parent=gene-CYJ01_RS08785;Dbxref=GenBank:WP_020220167.1;Name=WP_020220167.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=CYJ01_RS08785;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_020220167.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 23659 25167 . - . ID=gene-CYJ01_RS08790;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08790;old_locus_tag=CYJ01_08790 NZ_PJUR01000022.1 Protein Homology CDS 23659 25167 . - 0 ID=cds-WP_014612824.1;Parent=gene-CYJ01_RS08790;Dbxref=GenBank:WP_014612824.1;Name=WP_014612824.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612824.1;locus_tag=CYJ01_RS08790;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_014612824.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 25183 27570 . - . ID=gene-CYJ01_RS08795;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CYJ01_RS08795;old_locus_tag=CYJ01_08795 NZ_PJUR01000022.1 Protein Homology CDS 25183 27570 . - 0 ID=cds-WP_101457476.1;Parent=gene-CYJ01_RS08795;Dbxref=GenBank:WP_101457476.1;Name=WP_101457476.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=CYJ01_RS08795;product=accessory Sec system translocase SecA2;protein_id=WP_101457476.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 27567 28493 . - . ID=gene-CYJ01_RS08800;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CYJ01_RS08800;old_locus_tag=CYJ01_08800 NZ_PJUR01000022.1 Protein Homology CDS 27567 28493 . - 0 ID=cds-WP_101457477.1;Parent=gene-CYJ01_RS08800;Dbxref=GenBank:WP_101457477.1;Name=WP_101457477.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729740.1;locus_tag=CYJ01_RS08800;product=accessory Sec system protein Asp3;protein_id=WP_101457477.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 28483 30027 . - . ID=gene-CYJ01_RS08805;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CYJ01_RS08805;old_locus_tag=CYJ01_08805 NZ_PJUR01000022.1 Protein Homology CDS 28483 30027 . - 0 ID=cds-WP_063284745.1;Parent=gene-CYJ01_RS08805;Dbxref=GenBank:WP_063284745.1;Name=WP_063284745.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612821.1;locus_tag=CYJ01_RS08805;product=accessory Sec system protein Asp2;protein_id=WP_063284745.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 30011 31576 . - . ID=gene-CYJ01_RS08810;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CYJ01_RS08810;old_locus_tag=CYJ01_08810 NZ_PJUR01000022.1 Protein Homology CDS 30011 31576 . - 0 ID=cds-WP_101457478.1;Parent=gene-CYJ01_RS08810;Dbxref=GenBank:WP_101457478.1;Name=WP_101457478.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612820.1;locus_tag=CYJ01_RS08810;product=accessory Sec system protein Asp1;protein_id=WP_101457478.1;transl_table=11 NZ_PJUR01000022.1 RefSeq gene 31587 32795 . - . ID=gene-CYJ01_RS08815;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=CYJ01_RS08815;old_locus_tag=CYJ01_08815 NZ_PJUR01000022.1 Protein Homology CDS 31587 32795 . - 0 ID=cds-WP_037544107.1;Parent=gene-CYJ01_RS08815;Dbxref=GenBank:WP_037544107.1;Name=WP_037544107.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916108.1;locus_tag=CYJ01_RS08815;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_037544107.1;transl_table=11 NZ_PJUR01000022.1 RefSeq pseudogene 32919 34136 . - . ID=gene-CYJ01_RS12285;Name=CYJ01_RS12285;end_range=34136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12285;old_locus_tag=CYJ01_08820;partial=true;pseudo=true NZ_PJUR01000022.1 Protein Homology CDS 32919 34136 . - 0 ID=cds-CYJ01_RS12285;Parent=gene-CYJ01_RS12285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009986;end_range=34136,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS12285;partial=true;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000023.1 1 35240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000023.1 RefSeq region 1 35240 . + . ID=NZ_PJUR01000023.1:1..35240;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000023.1 RefSeq gene 1 195 . - . ID=gene-CYJ01_RS12185;Name=CYJ01_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12185;old_locus_tag=CYJ01_08825;partial=true;start_range=.,1 NZ_PJUR01000023.1 GeneMarkS-2+ CDS 1 195 . - 0 ID=cds-WP_206747267.1;Parent=gene-CYJ01_RS12185;Dbxref=GenBank:WP_206747267.1;Name=WP_206747267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12185;partial=true;product=hypothetical protein;protein_id=WP_206747267.1;start_range=.,1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 1129 1527 . - . ID=gene-CYJ01_RS08830;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CYJ01_RS08830;old_locus_tag=CYJ01_08830 NZ_PJUR01000023.1 Protein Homology CDS 1129 1527 . - 0 ID=cds-WP_014614622.1;Parent=gene-CYJ01_RS08830;Dbxref=GenBank:WP_014614622.1;Name=WP_014614622.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CYJ01_RS08830;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_014614622.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 1621 2712 . - . ID=gene-CYJ01_RS08835;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08835;old_locus_tag=CYJ01_08835 NZ_PJUR01000023.1 Protein Homology CDS 1621 2712 . - 0 ID=cds-WP_014614623.1;Parent=gene-CYJ01_RS08835;Dbxref=GenBank:WP_014614623.1;Name=WP_014614623.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=CYJ01_RS08835;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_014614623.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 2787 3590 . - . ID=gene-CYJ01_RS08840;Name=CYJ01_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08840;old_locus_tag=CYJ01_08840 NZ_PJUR01000023.1 Protein Homology CDS 2787 3590 . - 0 ID=cds-WP_014614624.1;Parent=gene-CYJ01_RS08840;Dbxref=GenBank:WP_014614624.1;Name=WP_014614624.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=CYJ01_RS08840;product=ABC transporter permease;protein_id=WP_014614624.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 3869 4663 . + . ID=gene-CYJ01_RS08845;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CYJ01_RS08845;old_locus_tag=CYJ01_08845 NZ_PJUR01000023.1 Protein Homology CDS 3869 4663 . + 0 ID=cds-WP_014614625.1;Parent=gene-CYJ01_RS08845;Dbxref=GenBank:WP_014614625.1;Name=WP_014614625.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CYJ01_RS08845;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_014614625.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 4877 5698 . - . ID=gene-CYJ01_RS08850;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08850;old_locus_tag=CYJ01_08850 NZ_PJUR01000023.1 Protein Homology CDS 4877 5698 . - 0 ID=cds-WP_065354545.1;Parent=gene-CYJ01_RS08850;Dbxref=GenBank:WP_065354545.1;Name=WP_065354545.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728699.1;locus_tag=CYJ01_RS08850;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_065354545.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 6080 6490 . + . ID=gene-CYJ01_RS08855;Name=CYJ01_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08855;old_locus_tag=CYJ01_08855 NZ_PJUR01000023.1 Protein Homology CDS 6080 6490 . + 0 ID=cds-WP_225549913.1;Parent=gene-CYJ01_RS08855;Dbxref=GenBank:WP_225549913.1;Name=WP_225549913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220039.1;locus_tag=CYJ01_RS08855;product=LbetaH domain-containing protein;protein_id=WP_225549913.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 6564 7307 . + . ID=gene-CYJ01_RS08860;Name=CYJ01_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08860;old_locus_tag=CYJ01_08860 NZ_PJUR01000023.1 Protein Homology CDS 6564 7307 . + 0 ID=cds-WP_037543834.1;Parent=gene-CYJ01_RS08860;Dbxref=GenBank:WP_037543834.1;Name=WP_037543834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728697.1;locus_tag=CYJ01_RS08860;product=M50 family metallopeptidase;protein_id=WP_037543834.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 7589 8353 . - . ID=gene-CYJ01_RS08865;Name=sbnI;gbkey=Gene;gene=sbnI;gene_biotype=protein_coding;locus_tag=CYJ01_RS08865;old_locus_tag=CYJ01_08865 NZ_PJUR01000023.1 Protein Homology CDS 7589 8353 . - 0 ID=cds-WP_014614629.1;Parent=gene-CYJ01_RS08865;Dbxref=GenBank:WP_014614629.1;Name=WP_014614629.1;gbkey=CDS;gene=sbnI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166229.1;locus_tag=CYJ01_RS08865;product=bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI;protein_id=WP_014614629.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 8350 9552 . - . ID=gene-CYJ01_RS08870;Name=CYJ01_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08870;old_locus_tag=CYJ01_08870 NZ_PJUR01000023.1 Protein Homology CDS 8350 9552 . - 0 ID=cds-WP_065520681.1;Parent=gene-CYJ01_RS08870;Dbxref=GenBank:WP_065520681.1;Name=WP_065520681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614630.1;locus_tag=CYJ01_RS08870;product=type III PLP-dependent enzyme;protein_id=WP_065520681.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 9527 10321 . - . ID=gene-CYJ01_RS08875;Name=CYJ01_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08875;old_locus_tag=CYJ01_08875 NZ_PJUR01000023.1 Protein Homology CDS 9527 10321 . - 0 ID=cds-WP_015728694.1;Parent=gene-CYJ01_RS08875;Dbxref=GenBank:WP_015728694.1;Name=WP_015728694.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728694.1;locus_tag=CYJ01_RS08875;product=HpcH/HpaI aldolase family protein;protein_id=WP_015728694.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 10318 12072 . - . ID=gene-CYJ01_RS08880;Name=sbnF;gbkey=Gene;gene=sbnF;gene_biotype=protein_coding;locus_tag=CYJ01_RS08880;old_locus_tag=CYJ01_08880 NZ_PJUR01000023.1 Protein Homology CDS 10318 12072 . - 0 ID=cds-WP_101431236.1;Parent=gene-CYJ01_RS08880;Dbxref=GenBank:WP_101431236.1;Name=WP_101431236.1;gbkey=CDS;gene=sbnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614632.1;locus_tag=CYJ01_RS08880;product=staphyloferrin B biosynthesis protein SbnF;protein_id=WP_101431236.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 12056 13774 . - . ID=gene-CYJ01_RS08885;Name=CYJ01_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08885;old_locus_tag=CYJ01_08885 NZ_PJUR01000023.1 Protein Homology CDS 12056 13774 . - 0 ID=cds-WP_101431237.1;Parent=gene-CYJ01_RS08885;Dbxref=GenBank:WP_101431237.1;Name=WP_101431237.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728692.1;locus_tag=CYJ01_RS08885;product=IucA/IucC family protein;protein_id=WP_101431237.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 13761 15020 . - . ID=gene-CYJ01_RS08890;Name=CYJ01_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08890;old_locus_tag=CYJ01_08890 NZ_PJUR01000023.1 Protein Homology CDS 13761 15020 . - 0 ID=cds-WP_082245603.1;Parent=gene-CYJ01_RS08890;Dbxref=GenBank:WP_082245603.1;Name=WP_082245603.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166234.1;locus_tag=CYJ01_RS08890;product=MFS transporter;protein_id=WP_082245603.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 14995 16770 . - . ID=gene-CYJ01_RS08895;Name=sbnC;gbkey=Gene;gene=sbnC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08895;old_locus_tag=CYJ01_08895 NZ_PJUR01000023.1 Protein Homology CDS 14995 16770 . - 0 ID=cds-WP_101431238.1;Parent=gene-CYJ01_RS08895;Dbxref=GenBank:WP_101431238.1;Name=WP_101431238.1;gbkey=CDS;gene=sbnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728691.1;locus_tag=CYJ01_RS08895;product=staphyloferrin B biosynthesis protein SbnC;protein_id=WP_101431238.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 16782 17792 . - . ID=gene-CYJ01_RS08900;Name=sbnB;gbkey=Gene;gene=sbnB;gene_biotype=protein_coding;locus_tag=CYJ01_RS08900;old_locus_tag=CYJ01_08900 NZ_PJUR01000023.1 Protein Homology CDS 16782 17792 . - 0 ID=cds-WP_096535883.1;Parent=gene-CYJ01_RS08900;Dbxref=GenBank:WP_096535883.1;Name=WP_096535883.1;Ontology_term=GO:0019290,GO:0016491;gbkey=CDS;gene=sbnB;go_function=oxidoreductase activity|0016491||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614636.1;locus_tag=CYJ01_RS08900;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=WP_096535883.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 17794 18771 . - . ID=gene-CYJ01_RS08905;Name=sbnA;gbkey=Gene;gene=sbnA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08905;old_locus_tag=CYJ01_08905 NZ_PJUR01000023.1 Protein Homology CDS 17794 18771 . - 0 ID=cds-WP_101457480.1;Parent=gene-CYJ01_RS08905;Dbxref=GenBank:WP_101457480.1;Name=WP_101457480.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=sbnA;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614637.1;locus_tag=CYJ01_RS08905;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=WP_101457480.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 19008 19991 . + . ID=gene-CYJ01_RS08910;Name=CYJ01_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08910;old_locus_tag=CYJ01_08910 NZ_PJUR01000023.1 Protein Homology CDS 19008 19991 . + 0 ID=cds-WP_015728689.1;Parent=gene-CYJ01_RS08910;Dbxref=GenBank:WP_015728689.1;Name=WP_015728689.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728689.1;locus_tag=CYJ01_RS08910;product=ABC transporter substrate-binding protein;protein_id=WP_015728689.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 20008 21003 . + . ID=gene-CYJ01_RS08915;Name=CYJ01_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08915;old_locus_tag=CYJ01_08915 NZ_PJUR01000023.1 Protein Homology CDS 20008 21003 . + 0 ID=cds-WP_020220036.1;Parent=gene-CYJ01_RS08915;Dbxref=GenBank:WP_020220036.1;Name=WP_020220036.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580228.1;locus_tag=CYJ01_RS08915;product=FecCD family ABC transporter permease;protein_id=WP_020220036.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 21000 21998 . + . ID=gene-CYJ01_RS08920;Name=CYJ01_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08920;old_locus_tag=CYJ01_08920 NZ_PJUR01000023.1 Protein Homology CDS 21000 21998 . + 0 ID=cds-WP_015728687.1;Parent=gene-CYJ01_RS08920;Dbxref=GenBank:WP_015728687.1;Name=WP_015728687.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191473.1;locus_tag=CYJ01_RS08920;product=FecCD family ABC transporter permease;protein_id=WP_015728687.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 22394 23041 . - . ID=gene-CYJ01_RS08925;Name=CYJ01_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08925;old_locus_tag=CYJ01_08925 NZ_PJUR01000023.1 Protein Homology CDS 22394 23041 . - 0 ID=cds-WP_014614641.1;Parent=gene-CYJ01_RS08925;Dbxref=GenBank:WP_014614641.1;Name=WP_014614641.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220035.1;locus_tag=CYJ01_RS08925;product=metal-dependent transcriptional regulator;protein_id=WP_014614641.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 23163 23939 . + . ID=gene-CYJ01_RS08930;Name=CYJ01_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08930;old_locus_tag=CYJ01_08930 NZ_PJUR01000023.1 Protein Homology CDS 23163 23939 . + 0 ID=cds-WP_014614642.1;Parent=gene-CYJ01_RS08930;Dbxref=GenBank:WP_014614642.1;Name=WP_014614642.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167322.1;locus_tag=CYJ01_RS08930;product=metal ABC transporter ATP-binding protein;protein_id=WP_014614642.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 23914 24753 . + . ID=gene-CYJ01_RS08935;Name=CYJ01_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08935;old_locus_tag=CYJ01_08935 NZ_PJUR01000023.1 Protein Homology CDS 23914 24753 . + 0 ID=cds-WP_014614643.1;Parent=gene-CYJ01_RS08935;Dbxref=GenBank:WP_014614643.1;Name=WP_014614643.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=CYJ01_RS08935;product=metal ABC transporter permease;protein_id=WP_014614643.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 24753 25670 . + . ID=gene-CYJ01_RS08940;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=CYJ01_RS08940;old_locus_tag=CYJ01_08940 NZ_PJUR01000023.1 Protein Homology CDS 24753 25670 . + 0 ID=cds-WP_037544291.1;Parent=gene-CYJ01_RS08940;Dbxref=GenBank:WP_037544291.1;Name=WP_037544291.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501435.1;locus_tag=CYJ01_RS08940;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037544291.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 26307 26753 . - . ID=gene-CYJ01_RS08945;Name=CYJ01_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08945;old_locus_tag=CYJ01_08945 NZ_PJUR01000023.1 Protein Homology CDS 26307 26753 . - 0 ID=cds-WP_014614645.1;Parent=gene-CYJ01_RS08945;Dbxref=GenBank:WP_014614645.1;Name=WP_014614645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614645.1;locus_tag=CYJ01_RS08945;product=Na+/H+ antiporter subunit G;protein_id=WP_014614645.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 26737 27030 . - . ID=gene-CYJ01_RS08950;Name=CYJ01_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08950;old_locus_tag=CYJ01_08950 NZ_PJUR01000023.1 Protein Homology CDS 26737 27030 . - 0 ID=cds-WP_014614646.1;Parent=gene-CYJ01_RS08950;Dbxref=GenBank:WP_014614646.1;Name=WP_014614646.1;Ontology_term=GO:0034220,GO:0015075,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167327.1;locus_tag=CYJ01_RS08950;product=monovalent cation/H+ antiporter complex subunit F;protein_id=WP_014614646.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 27027 27509 . - . ID=gene-CYJ01_RS08955;Name=CYJ01_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08955;old_locus_tag=CYJ01_08955 NZ_PJUR01000023.1 Protein Homology CDS 27027 27509 . - 0 ID=cds-WP_101457481.1;Parent=gene-CYJ01_RS08955;Dbxref=GenBank:WP_101457481.1;Name=WP_101457481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898376.1;locus_tag=CYJ01_RS08955;product=Na+/H+ antiporter subunit E;protein_id=WP_101457481.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 27510 29009 . - . ID=gene-CYJ01_RS08960;Name=CYJ01_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08960;old_locus_tag=CYJ01_08960 NZ_PJUR01000023.1 Protein Homology CDS 27510 29009 . - 0 ID=cds-WP_101457482.1;Parent=gene-CYJ01_RS08960;Dbxref=GenBank:WP_101457482.1;Name=WP_101457482.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166250.1;locus_tag=CYJ01_RS08960;product=Na+/H+ antiporter subunit D;protein_id=WP_101457482.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 29002 29346 . - . ID=gene-CYJ01_RS08965;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=CYJ01_RS08965;old_locus_tag=CYJ01_08965 NZ_PJUR01000023.1 Protein Homology CDS 29002 29346 . - 0 ID=cds-WP_014614649.1;Parent=gene-CYJ01_RS08965;Dbxref=GenBank:WP_014614649.1;Name=WP_014614649.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451046.1;locus_tag=CYJ01_RS08965;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_014614649.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 29343 29768 . - . ID=gene-CYJ01_RS08970;Name=CYJ01_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08970;old_locus_tag=CYJ01_08970 NZ_PJUR01000023.1 Protein Homology CDS 29343 29768 . - 0 ID=cds-WP_014614650.1;Parent=gene-CYJ01_RS08970;Dbxref=GenBank:WP_014614650.1;Name=WP_014614650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=CYJ01_RS08970;product=monovalent cation/H+ antiporter subunit B;protein_id=WP_014614650.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 29755 32145 . - . ID=gene-CYJ01_RS08975;Name=CYJ01_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08975;old_locus_tag=CYJ01_08975 NZ_PJUR01000023.1 Protein Homology CDS 29755 32145 . - 0 ID=cds-WP_101457483.1;Parent=gene-CYJ01_RS08975;Dbxref=GenBank:WP_101457483.1;Name=WP_101457483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167332.1;locus_tag=CYJ01_RS08975;product=DUF4040 family protein;protein_id=WP_101457483.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 32167 32718 . - . ID=gene-CYJ01_RS08980;Name=CYJ01_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08980;old_locus_tag=CYJ01_08980 NZ_PJUR01000023.1 Protein Homology CDS 32167 32718 . - 0 ID=cds-WP_015728683.1;Parent=gene-CYJ01_RS08980;Dbxref=GenBank:WP_015728683.1;Name=WP_015728683.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=CYJ01_RS08980;product=tyrosine-type recombinase/integrase;protein_id=WP_015728683.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 32861 33064 . + . ID=gene-CYJ01_RS08985;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=CYJ01_RS08985;old_locus_tag=CYJ01_08985 NZ_PJUR01000023.1 Protein Homology CDS 32861 33064 . + 0 ID=cds-WP_014614653.1;Parent=gene-CYJ01_RS08985;Dbxref=GenBank:WP_014614653.1;Name=WP_014614653.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=CYJ01_RS08985;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_014614653.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 33080 33295 . + . ID=gene-CYJ01_RS08990;Name=CYJ01_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08990;old_locus_tag=CYJ01_08990 NZ_PJUR01000023.1 Protein Homology CDS 33080 33295 . + 0 ID=cds-WP_014614654.1;Parent=gene-CYJ01_RS08990;Dbxref=GenBank:WP_014614654.1;Name=WP_014614654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167335.1;locus_tag=CYJ01_RS08990;product=DUF2922 domain-containing protein;protein_id=WP_014614654.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 33636 33905 . - . ID=gene-CYJ01_RS08995;Name=CYJ01_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS08995;old_locus_tag=CYJ01_08995 NZ_PJUR01000023.1 Protein Homology CDS 33636 33905 . - 0 ID=cds-WP_063284880.1;Parent=gene-CYJ01_RS08995;Dbxref=GenBank:WP_063284880.1;Name=WP_063284880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728682.1;locus_tag=CYJ01_RS08995;product=hypothetical protein;protein_id=WP_063284880.1;transl_table=11 NZ_PJUR01000023.1 RefSeq gene 34119 35048 . + . ID=gene-CYJ01_RS09000;Name=CYJ01_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09000;old_locus_tag=CYJ01_09000 NZ_PJUR01000023.1 Protein Homology CDS 34119 35048 . + 0 ID=cds-WP_063278866.1;Parent=gene-CYJ01_RS09000;Dbxref=GenBank:WP_063278866.1;Name=WP_063278866.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=CYJ01_RS09000;product=DMT family transporter;protein_id=WP_063278866.1;transl_table=11 ##sequence-region NZ_PJUR01000024.1 1 27521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000024.1 RefSeq region 1 27521 . + . ID=NZ_PJUR01000024.1:1..27521;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000024.1 RefSeq gene 81 156 . - . ID=gene-CYJ01_RS09005;Name=CYJ01_RS09005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09005;old_locus_tag=CYJ01_09005 NZ_PJUR01000024.1 tRNAscan-SE tRNA 81 156 . - . ID=rna-CYJ01_RS09005;Parent=gene-CYJ01_RS09005;anticodon=(pos:complement(121..123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09005;product=tRNA-Ala NZ_PJUR01000024.1 tRNAscan-SE exon 81 156 . - . ID=exon-CYJ01_RS09005-1;Parent=rna-CYJ01_RS09005;anticodon=(pos:complement(121..123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09005;product=tRNA-Ala NZ_PJUR01000024.1 RefSeq gene 179 252 . - . ID=gene-CYJ01_RS09010;Name=CYJ01_RS09010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09010;old_locus_tag=CYJ01_09010 NZ_PJUR01000024.1 tRNAscan-SE tRNA 179 252 . - . ID=rna-CYJ01_RS09010;Parent=gene-CYJ01_RS09010;anticodon=(pos:complement(216..218));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09010;product=tRNA-Pro NZ_PJUR01000024.1 tRNAscan-SE exon 179 252 . - . ID=exon-CYJ01_RS09010-1;Parent=rna-CYJ01_RS09010;anticodon=(pos:complement(216..218));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09010;product=tRNA-Pro NZ_PJUR01000024.1 RefSeq gene 266 339 . - . ID=gene-CYJ01_RS09015;Name=CYJ01_RS09015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09015;old_locus_tag=CYJ01_09015 NZ_PJUR01000024.1 tRNAscan-SE tRNA 266 339 . - . ID=rna-CYJ01_RS09015;Parent=gene-CYJ01_RS09015;anticodon=(pos:complement(303..305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09015;product=tRNA-Arg NZ_PJUR01000024.1 tRNAscan-SE exon 266 339 . - . ID=exon-CYJ01_RS09015-1;Parent=rna-CYJ01_RS09015;anticodon=(pos:complement(303..305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09015;product=tRNA-Arg NZ_PJUR01000024.1 RefSeq gene 357 445 . - . ID=gene-CYJ01_RS09020;Name=CYJ01_RS09020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09020;old_locus_tag=CYJ01_09020 NZ_PJUR01000024.1 tRNAscan-SE tRNA 357 445 . - . ID=rna-CYJ01_RS09020;Parent=gene-CYJ01_RS09020;anticodon=(pos:complement(409..411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09020;product=tRNA-Leu NZ_PJUR01000024.1 tRNAscan-SE exon 357 445 . - . ID=exon-CYJ01_RS09020-1;Parent=rna-CYJ01_RS09020;anticodon=(pos:complement(409..411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09020;product=tRNA-Leu NZ_PJUR01000024.1 RefSeq gene 452 526 . - . ID=gene-CYJ01_RS09025;Name=CYJ01_RS09025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09025;old_locus_tag=CYJ01_09025 NZ_PJUR01000024.1 tRNAscan-SE tRNA 452 526 . - . ID=rna-CYJ01_RS09025;Parent=gene-CYJ01_RS09025;anticodon=(pos:complement(492..494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09025;product=tRNA-Gly NZ_PJUR01000024.1 tRNAscan-SE exon 452 526 . - . ID=exon-CYJ01_RS09025-1;Parent=rna-CYJ01_RS09025;anticodon=(pos:complement(492..494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09025;product=tRNA-Gly NZ_PJUR01000024.1 RefSeq gene 530 611 . - . ID=gene-CYJ01_RS09030;Name=CYJ01_RS09030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09030;old_locus_tag=CYJ01_09030 NZ_PJUR01000024.1 tRNAscan-SE tRNA 530 611 . - . ID=rna-CYJ01_RS09030;Parent=gene-CYJ01_RS09030;anticodon=(pos:complement(575..577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09030;product=tRNA-Leu NZ_PJUR01000024.1 tRNAscan-SE exon 530 611 . - . ID=exon-CYJ01_RS09030-1;Parent=rna-CYJ01_RS09030;anticodon=(pos:complement(575..577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09030;product=tRNA-Leu NZ_PJUR01000024.1 RefSeq gene 616 688 . - . ID=gene-CYJ01_RS09035;Name=CYJ01_RS09035;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09035;old_locus_tag=CYJ01_09035 NZ_PJUR01000024.1 tRNAscan-SE tRNA 616 688 . - . ID=rna-CYJ01_RS09035;Parent=gene-CYJ01_RS09035;anticodon=(pos:complement(653..655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09035;product=tRNA-Lys NZ_PJUR01000024.1 tRNAscan-SE exon 616 688 . - . ID=exon-CYJ01_RS09035-1;Parent=rna-CYJ01_RS09035;anticodon=(pos:complement(653..655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09035;product=tRNA-Lys NZ_PJUR01000024.1 RefSeq gene 695 770 . - . ID=gene-CYJ01_RS09040;Name=CYJ01_RS09040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09040;old_locus_tag=CYJ01_09040 NZ_PJUR01000024.1 tRNAscan-SE tRNA 695 770 . - . ID=rna-CYJ01_RS09040;Parent=gene-CYJ01_RS09040;anticodon=(pos:complement(735..737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09040;product=tRNA-Thr NZ_PJUR01000024.1 tRNAscan-SE exon 695 770 . - . ID=exon-CYJ01_RS09040-1;Parent=rna-CYJ01_RS09040;anticodon=(pos:complement(735..737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09040;product=tRNA-Thr NZ_PJUR01000024.1 RefSeq gene 794 869 . - . ID=gene-CYJ01_RS09045;Name=CYJ01_RS09045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09045;old_locus_tag=CYJ01_09045 NZ_PJUR01000024.1 tRNAscan-SE tRNA 794 869 . - . ID=rna-CYJ01_RS09045;Parent=gene-CYJ01_RS09045;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09045;product=tRNA-Val NZ_PJUR01000024.1 tRNAscan-SE exon 794 869 . - . ID=exon-CYJ01_RS09045-1;Parent=rna-CYJ01_RS09045;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09045;product=tRNA-Val NZ_PJUR01000024.1 RefSeq gene 882 996 . - . ID=gene-CYJ01_RS09050;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ01_RS09050;old_locus_tag=CYJ01_09050 NZ_PJUR01000024.1 cmsearch rRNA 882 996 . - . ID=rna-CYJ01_RS09050;Parent=gene-CYJ01_RS09050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS09050;product=5S ribosomal RNA NZ_PJUR01000024.1 cmsearch exon 882 996 . - . ID=exon-CYJ01_RS09050-1;Parent=rna-CYJ01_RS09050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS09050;product=5S ribosomal RNA NZ_PJUR01000024.1 RefSeq gene 1409 2896 . - . ID=gene-CYJ01_RS09055;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CYJ01_RS09055;old_locus_tag=CYJ01_09055 NZ_PJUR01000024.1 Protein Homology CDS 1409 2896 . - 0 ID=cds-WP_014614787.1;Parent=gene-CYJ01_RS09055;Dbxref=GenBank:WP_014614787.1;Name=WP_014614787.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499070.1;locus_tag=CYJ01_RS09055;product=lysine--tRNA ligase;protein_id=WP_014614787.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 2919 3911 . - . ID=gene-CYJ01_RS09060;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09060;old_locus_tag=CYJ01_09060 NZ_PJUR01000024.1 Protein Homology CDS 2919 3911 . - 0 ID=cds-WP_101457484.1;Parent=gene-CYJ01_RS09060;Dbxref=GenBank:WP_101457484.1;Name=WP_101457484.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=CYJ01_RS09060;product=tRNA dihydrouridine synthase DusB;protein_id=WP_101457484.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 3956 4441 . - . ID=gene-CYJ01_RS09065;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CYJ01_RS09065;old_locus_tag=CYJ01_09065 NZ_PJUR01000024.1 Protein Homology CDS 3956 4441 . - 0 ID=cds-WP_014614789.1;Parent=gene-CYJ01_RS09065;Dbxref=GenBank:WP_014614789.1;Name=WP_014614789.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165002.1;locus_tag=CYJ01_RS09065;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_014614789.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 4434 4805 . - . ID=gene-CYJ01_RS09070;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09070;old_locus_tag=CYJ01_09070 NZ_PJUR01000024.1 Protein Homology CDS 4434 4805 . - 0 ID=cds-WP_014614790.1;Parent=gene-CYJ01_RS09070;Dbxref=GenBank:WP_014614790.1;Name=WP_014614790.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614790.1;locus_tag=CYJ01_RS09070;product=dihydroneopterin aldolase;protein_id=WP_014614790.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 4795 5586 . - . ID=gene-CYJ01_RS09075;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CYJ01_RS09075;old_locus_tag=CYJ01_09075 NZ_PJUR01000024.1 Protein Homology CDS 4795 5586 . - 0 ID=cds-WP_101431400.1;Parent=gene-CYJ01_RS09075;Dbxref=GenBank:WP_101431400.1;Name=WP_101431400.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=CYJ01_RS09075;product=dihydropteroate synthase;protein_id=WP_101431400.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 5809 6738 . - . ID=gene-CYJ01_RS09080;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CYJ01_RS09080;old_locus_tag=CYJ01_09080 NZ_PJUR01000024.1 Protein Homology CDS 5809 6738 . - 0 ID=cds-WP_014614792.1;Parent=gene-CYJ01_RS09080;Dbxref=GenBank:WP_014614792.1;Name=WP_014614792.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=CYJ01_RS09080;product=cysteine synthase A;protein_id=WP_014614792.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 7262 8146 . - . ID=gene-CYJ01_RS09085;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CYJ01_RS09085;old_locus_tag=CYJ01_09085 NZ_PJUR01000024.1 Protein Homology CDS 7262 8146 . - 0 ID=cds-WP_014614793.1;Parent=gene-CYJ01_RS09085;Dbxref=GenBank:WP_014614793.1;Name=WP_014614793.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165006.1;locus_tag=CYJ01_RS09085;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014614793.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 8601 10715 . - . ID=gene-CYJ01_RS09090;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=CYJ01_RS09090;old_locus_tag=CYJ01_09090 NZ_PJUR01000024.1 Protein Homology CDS 8601 10715 . - 0 ID=cds-WP_015728595.1;Parent=gene-CYJ01_RS09090;Dbxref=GenBank:WP_015728595.1;Name=WP_015728595.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=CYJ01_RS09090;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_015728595.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 10831 11370 . - . ID=gene-CYJ01_RS09095;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CYJ01_RS09095;old_locus_tag=CYJ01_09095 NZ_PJUR01000024.1 Protein Homology CDS 10831 11370 . - 0 ID=cds-WP_014614795.1;Parent=gene-CYJ01_RS09095;Dbxref=GenBank:WP_014614795.1;Name=WP_014614795.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=CYJ01_RS09095;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014614795.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 11360 12649 . - . ID=gene-CYJ01_RS09100;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CYJ01_RS09100;old_locus_tag=CYJ01_09100 NZ_PJUR01000024.1 Protein Homology CDS 11360 12649 . - 0 ID=cds-WP_037543956.1;Parent=gene-CYJ01_RS09100;Dbxref=GenBank:WP_037543956.1;Name=WP_037543956.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220126.1;locus_tag=CYJ01_RS09100;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_037543956.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 12732 13109 . - . ID=gene-CYJ01_RS09105;Name=CYJ01_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09105;old_locus_tag=CYJ01_09105 NZ_PJUR01000024.1 Protein Homology CDS 12732 13109 . - 0 ID=cds-WP_014614797.1;Parent=gene-CYJ01_RS09105;Dbxref=GenBank:WP_014614797.1;Name=WP_014614797.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=CYJ01_RS09105;product=S1 domain-containing RNA-binding protein;protein_id=WP_014614797.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 13249 13638 . - . ID=gene-CYJ01_RS09110;Name=CYJ01_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09110;old_locus_tag=CYJ01_09110 NZ_PJUR01000024.1 Protein Homology CDS 13249 13638 . - 0 ID=cds-WP_014614798.1;Parent=gene-CYJ01_RS09110;Dbxref=GenBank:WP_014614798.1;Name=WP_014614798.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165010.1;locus_tag=CYJ01_RS09110;product=FtsB family cell division protein;protein_id=WP_014614798.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 13666 13923 . - . ID=gene-CYJ01_RS09115;Name=CYJ01_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09115;old_locus_tag=CYJ01_09115 NZ_PJUR01000024.1 Protein Homology CDS 13666 13923 . - 0 ID=cds-WP_014614799.1;Parent=gene-CYJ01_RS09115;Dbxref=GenBank:WP_014614799.1;Name=WP_014614799.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169417.1;locus_tag=CYJ01_RS09115;product=RNA-binding S4 domain-containing protein;protein_id=WP_014614799.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 13920 15098 . - . ID=gene-CYJ01_RS09120;Name=CYJ01_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09120;old_locus_tag=CYJ01_09120 NZ_PJUR01000024.1 Protein Homology CDS 13920 15098 . - 0 ID=cds-WP_101457485.1;Parent=gene-CYJ01_RS09120;Dbxref=GenBank:WP_101457485.1;Name=WP_101457485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426507.1;locus_tag=CYJ01_RS09120;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_101457485.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 15095 16627 . - . ID=gene-CYJ01_RS09125;Name=CYJ01_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09125;old_locus_tag=CYJ01_09125 NZ_PJUR01000024.1 Protein Homology CDS 15095 16627 . - 0 ID=cds-WP_101457486.1;Parent=gene-CYJ01_RS09125;Dbxref=GenBank:WP_101457486.1;Name=WP_101457486.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=CYJ01_RS09125;product=polysaccharide biosynthesis protein;protein_id=WP_101457486.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 16617 20120 . - . ID=gene-CYJ01_RS09130;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CYJ01_RS09130;old_locus_tag=CYJ01_09130 NZ_PJUR01000024.1 Protein Homology CDS 16617 20120 . - 0 ID=cds-WP_423830982.1;Parent=gene-CYJ01_RS09130;Dbxref=GenBank:WP_423830982.1;Name=WP_423830982.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614802.1;locus_tag=CYJ01_RS09130;product=transcription-repair coupling factor;protein_id=WP_423830982.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 20126 20698 . - . ID=gene-CYJ01_RS09135;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CYJ01_RS09135;old_locus_tag=CYJ01_09135 NZ_PJUR01000024.1 Protein Homology CDS 20126 20698 . - 0 ID=cds-WP_014614803.1;Parent=gene-CYJ01_RS09135;Dbxref=GenBank:WP_014614803.1;Name=WP_014614803.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426510.1;locus_tag=CYJ01_RS09135;product=aminoacyl-tRNA hydrolase;protein_id=WP_014614803.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 21158 21808 . - . ID=gene-CYJ01_RS09140;Name=CYJ01_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09140;old_locus_tag=CYJ01_09140 NZ_PJUR01000024.1 Protein Homology CDS 21158 21808 . - 0 ID=cds-WP_101457488.1;Parent=gene-CYJ01_RS09140;Dbxref=GenBank:WP_101457488.1;Name=WP_101457488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614804.1;locus_tag=CYJ01_RS09140;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_101457488.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 21946 22911 . - . ID=gene-CYJ01_RS09145;Name=CYJ01_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09145;old_locus_tag=CYJ01_09145 NZ_PJUR01000024.1 Protein Homology CDS 21946 22911 . - 0 ID=cds-WP_014614805.1;Parent=gene-CYJ01_RS09145;Dbxref=GenBank:WP_014614805.1;Name=WP_014614805.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CYJ01_RS09145;product=ribose-phosphate diphosphokinase;protein_id=WP_014614805.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 22987 24351 . - . ID=gene-CYJ01_RS09150;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CYJ01_RS09150;old_locus_tag=CYJ01_09150 NZ_PJUR01000024.1 Protein Homology CDS 22987 24351 . - 0 ID=cds-WP_101457489.1;Parent=gene-CYJ01_RS09150;Dbxref=GenBank:WP_101457489.1;Name=WP_101457489.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=CYJ01_RS09150;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_101457489.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 24633 24947 . - . ID=gene-CYJ01_RS09155;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=CYJ01_RS09155;old_locus_tag=CYJ01_09155 NZ_PJUR01000024.1 Protein Homology CDS 24633 24947 . - 0 ID=cds-WP_014614807.1;Parent=gene-CYJ01_RS09155;Dbxref=GenBank:WP_014614807.1;Name=WP_014614807.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614807.1;locus_tag=CYJ01_RS09155;product=septation regulator SpoVG;protein_id=WP_014614807.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 25026 25406 . - . ID=gene-CYJ01_RS09160;Name=CYJ01_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09160;old_locus_tag=CYJ01_09160 NZ_PJUR01000024.1 Protein Homology CDS 25026 25406 . - 0 ID=cds-WP_014614808.1;Parent=gene-CYJ01_RS09160;Dbxref=GenBank:WP_014614808.1;Name=WP_014614808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667755.1;locus_tag=CYJ01_RS09160;product=RidA family protein;protein_id=WP_014614808.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 25431 26252 . - . ID=gene-CYJ01_RS09165;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CYJ01_RS09165;old_locus_tag=CYJ01_09165 NZ_PJUR01000024.1 Protein Homology CDS 25431 26252 . - 0 ID=cds-WP_014614809.1;Parent=gene-CYJ01_RS09165;Dbxref=GenBank:WP_014614809.1;Name=WP_014614809.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614809.1;locus_tag=CYJ01_RS09165;product=pur operon repressor;protein_id=WP_014614809.1;transl_table=11 NZ_PJUR01000024.1 RefSeq gene 26274 27122 . - . ID=gene-CYJ01_RS09170;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CYJ01_RS09170;old_locus_tag=CYJ01_09170 NZ_PJUR01000024.1 Protein Homology CDS 26274 27122 . - 0 ID=cds-WP_014614810.1;Parent=gene-CYJ01_RS09170;Dbxref=GenBank:WP_014614810.1;Name=WP_014614810.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=CYJ01_RS09170;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014614810.1;transl_table=11 ##sequence-region NZ_PJUR01000025.1 1 31582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000025.1 RefSeq region 1 31582 . + . ID=NZ_PJUR01000025.1:1..31582;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000025.1 RefSeq gene 139 504 . - . ID=gene-CYJ01_RS09175;Name=CYJ01_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09175;old_locus_tag=CYJ01_09175 NZ_PJUR01000025.1 Protein Homology CDS 139 504 . - 0 ID=cds-WP_014614434.1;Parent=gene-CYJ01_RS09175;Dbxref=GenBank:WP_014614434.1;Name=WP_014614434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=CYJ01_RS09175;product=YutD family protein;protein_id=WP_014614434.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 523 1440 . - . ID=gene-CYJ01_RS09180;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09180;old_locus_tag=CYJ01_09180 NZ_PJUR01000025.1 Protein Homology CDS 523 1440 . - 0 ID=cds-WP_014614435.1;Parent=gene-CYJ01_RS09180;Dbxref=GenBank:WP_014614435.1;Name=WP_014614435.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614435.1;locus_tag=CYJ01_RS09180;product=lipoyl synthase;protein_id=WP_014614435.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 1526 2845 . - . ID=gene-CYJ01_RS09185;Name=CYJ01_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09185;old_locus_tag=CYJ01_09185 NZ_PJUR01000025.1 Protein Homology CDS 1526 2845 . - 0 ID=cds-WP_014614436.1;Parent=gene-CYJ01_RS09185;Dbxref=GenBank:WP_014614436.1;Name=WP_014614436.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728857.1;locus_tag=CYJ01_RS09185;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_014614436.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 2862 3692 . - . ID=gene-CYJ01_RS09190;Name=CYJ01_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09190;old_locus_tag=CYJ01_09190 NZ_PJUR01000025.1 Protein Homology CDS 2862 3692 . - 0 ID=cds-WP_041613273.1;Parent=gene-CYJ01_RS09190;Dbxref=GenBank:WP_041613273.1;Name=WP_041613273.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956137.1;locus_tag=CYJ01_RS09190;product=sulfite exporter TauE/SafE family protein;protein_id=WP_041613273.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 3701 4549 . - . ID=gene-CYJ01_RS09195;Name=CYJ01_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09195;old_locus_tag=CYJ01_09195 NZ_PJUR01000025.1 Protein Homology CDS 3701 4549 . - 0 ID=cds-WP_014614438.1;Parent=gene-CYJ01_RS09195;Dbxref=GenBank:WP_014614438.1;Name=WP_014614438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=CYJ01_RS09195;product=DUF72 domain-containing protein;protein_id=WP_014614438.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 4673 5380 . + . ID=gene-CYJ01_RS09200;Name=CYJ01_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09200;old_locus_tag=CYJ01_09200 NZ_PJUR01000025.1 Protein Homology CDS 4673 5380 . + 0 ID=cds-WP_096533199.1;Parent=gene-CYJ01_RS09200;Dbxref=GenBank:WP_096533199.1;Name=WP_096533199.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219503.1;locus_tag=CYJ01_RS09200;product=alpha/beta hydrolase family protein;protein_id=WP_096533199.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 5841 6185 . - . ID=gene-CYJ01_RS12290;Name=CYJ01_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12290 NZ_PJUR01000025.1 Protein Homology CDS 5841 6185 . - 0 ID=cds-WP_241900537.1;Parent=gene-CYJ01_RS12290;Dbxref=GenBank:WP_241900537.1;Name=WP_241900537.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: protein motif:HMM:NF015047.7;locus_tag=CYJ01_RS12290;product=nitronate monooxygenase;protein_id=WP_241900537.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 6198 6362 . - . ID=gene-CYJ01_RS12295;Name=CYJ01_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12295 NZ_PJUR01000025.1 GeneMarkS-2+ CDS 6198 6362 . - 0 ID=cds-WP_187530585.1;Parent=gene-CYJ01_RS12295;Dbxref=GenBank:WP_187530585.1;Name=WP_187530585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12295;product=nitronate monooxygenase;protein_id=WP_187530585.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 6444 7442 . - . ID=gene-CYJ01_RS09210;Name=CYJ01_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09210;old_locus_tag=CYJ01_09210 NZ_PJUR01000025.1 Protein Homology CDS 6444 7442 . - 0 ID=cds-WP_014614441.1;Parent=gene-CYJ01_RS09210;Dbxref=GenBank:WP_014614441.1;Name=WP_014614441.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=CYJ01_RS09210;product=hemolysin family protein;protein_id=WP_014614441.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 7732 8016 . - . ID=gene-CYJ01_RS09215;Name=CYJ01_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09215;old_locus_tag=CYJ01_09215 NZ_PJUR01000025.1 Protein Homology CDS 7732 8016 . - 0 ID=cds-WP_015728852.1;Parent=gene-CYJ01_RS09215;Dbxref=GenBank:WP_015728852.1;Name=WP_015728852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728852.1;locus_tag=CYJ01_RS09215;product=type 1 glutamine amidotransferase family protein;protein_id=WP_015728852.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 8162 9559 . - . ID=gene-CYJ01_RS09220;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09220;old_locus_tag=CYJ01_09220 NZ_PJUR01000025.1 Protein Homology CDS 8162 9559 . - 0 ID=cds-WP_014614443.1;Parent=gene-CYJ01_RS09220;Dbxref=GenBank:WP_014614443.1;Name=WP_014614443.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CYJ01_RS09220;product=Fe-S cluster assembly protein SufB;protein_id=WP_014614443.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 9657 10106 . - . ID=gene-CYJ01_RS09225;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=CYJ01_RS09225;old_locus_tag=CYJ01_09225 NZ_PJUR01000025.1 Protein Homology CDS 9657 10106 . - 0 ID=cds-WP_101457490.1;Parent=gene-CYJ01_RS09225;Dbxref=GenBank:WP_101457490.1;Name=WP_101457490.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=CYJ01_RS09225;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_101457490.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 10096 11337 . - . ID=gene-CYJ01_RS09230;Name=CYJ01_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09230;old_locus_tag=CYJ01_09230 NZ_PJUR01000025.1 Protein Homology CDS 10096 11337 . - 0 ID=cds-WP_014614445.1;Parent=gene-CYJ01_RS09230;Dbxref=GenBank:WP_014614445.1;Name=WP_014614445.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533341.1;locus_tag=CYJ01_RS09230;product=cysteine desulfurase;protein_id=WP_014614445.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 11366 12673 . - . ID=gene-CYJ01_RS09235;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CYJ01_RS09235;old_locus_tag=CYJ01_09235 NZ_PJUR01000025.1 Protein Homology CDS 11366 12673 . - 0 ID=cds-WP_063278560.1;Parent=gene-CYJ01_RS09235;Dbxref=GenBank:WP_063278560.1;Name=WP_063278560.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=CYJ01_RS09235;product=Fe-S cluster assembly protein SufD;protein_id=WP_063278560.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 12695 13465 . - . ID=gene-CYJ01_RS09240;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CYJ01_RS09240;old_locus_tag=CYJ01_09240 NZ_PJUR01000025.1 Protein Homology CDS 12695 13465 . - 0 ID=cds-WP_014614447.1;Parent=gene-CYJ01_RS09240;Dbxref=GenBank:WP_014614447.1;Name=WP_014614447.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=CYJ01_RS09240;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_014614447.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 13763 14623 . + . ID=gene-CYJ01_RS09245;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=CYJ01_RS09245;old_locus_tag=CYJ01_09245 NZ_PJUR01000025.1 Protein Homology CDS 13763 14623 . + 0 ID=cds-WP_101457491.1;Parent=gene-CYJ01_RS09245;Dbxref=GenBank:WP_101457491.1;Name=WP_101457491.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614448.1;locus_tag=CYJ01_RS09245;product=polyprenyl-phosphate transporter PopT;protein_id=WP_101457491.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 14920 15738 . - . ID=gene-CYJ01_RS09250;Name=CYJ01_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09250;old_locus_tag=CYJ01_09250 NZ_PJUR01000025.1 Protein Homology CDS 14920 15738 . - 0 ID=cds-WP_020219509.1;Parent=gene-CYJ01_RS09250;Dbxref=GenBank:WP_020219509.1;Name=WP_020219509.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614449.1;locus_tag=CYJ01_RS09250;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_020219509.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 15867 16688 . - . ID=gene-CYJ01_RS09255;Name=CYJ01_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09255;old_locus_tag=CYJ01_09255 NZ_PJUR01000025.1 Protein Homology CDS 15867 16688 . - 0 ID=cds-WP_014614450.1;Parent=gene-CYJ01_RS09255;Dbxref=GenBank:WP_014614450.1;Name=WP_014614450.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276309.1;locus_tag=CYJ01_RS09255;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014614450.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 16708 17403 . - . ID=gene-CYJ01_RS09260;Name=CYJ01_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09260;old_locus_tag=CYJ01_09260 NZ_PJUR01000025.1 Protein Homology CDS 16708 17403 . - 0 ID=cds-WP_063284816.1;Parent=gene-CYJ01_RS09260;Dbxref=GenBank:WP_063284816.1;Name=WP_063284816.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CYJ01_RS09260;product=methionine ABC transporter permease;protein_id=WP_063284816.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 17396 18424 . - . ID=gene-CYJ01_RS09265;Name=CYJ01_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09265;old_locus_tag=CYJ01_09265 NZ_PJUR01000025.1 Protein Homology CDS 17396 18424 . - 0 ID=cds-WP_101457492.1;Parent=gene-CYJ01_RS09265;Dbxref=GenBank:WP_101457492.1;Name=WP_101457492.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276311.1;locus_tag=CYJ01_RS09265;product=methionine ABC transporter ATP-binding protein;protein_id=WP_101457492.1;transl_table=11 NZ_PJUR01000025.1 cmsearch riboswitch 18520 18629 . - . ID=id-NZ_PJUR01000025.1:18520..18629;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000025.1 RefSeq gene 18667 18984 . - . ID=gene-CYJ01_RS09270;Name=CYJ01_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09270;old_locus_tag=CYJ01_09270 NZ_PJUR01000025.1 Protein Homology CDS 18667 18984 . - 0 ID=cds-WP_101457493.1;Parent=gene-CYJ01_RS09270;Dbxref=GenBank:WP_101457493.1;Name=WP_101457493.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=CYJ01_RS09270;product=thioredoxin family protein;protein_id=WP_101457493.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 18950 19345 . - . ID=gene-CYJ01_RS09275;Name=CYJ01_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09275;old_locus_tag=CYJ01_09275 NZ_PJUR01000025.1 Protein Homology CDS 18950 19345 . - 0 ID=cds-WP_014614455.1;Parent=gene-CYJ01_RS09275;Dbxref=GenBank:WP_014614455.1;Name=WP_014614455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=CYJ01_RS09275;product=toprim domain-containing protein;protein_id=WP_014614455.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 19424 19804 . - . ID=gene-CYJ01_RS09280;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CYJ01_RS09280;old_locus_tag=CYJ01_09280 NZ_PJUR01000025.1 Protein Homology CDS 19424 19804 . - 0 ID=cds-WP_014614456.1;Parent=gene-CYJ01_RS09280;Dbxref=GenBank:WP_014614456.1;Name=WP_014614456.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499390.1;locus_tag=CYJ01_RS09280;product=glycine cleavage system protein GcvH;protein_id=WP_014614456.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 19878 20234 . - . ID=gene-CYJ01_RS09285;Name=CYJ01_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09285;old_locus_tag=CYJ01_09285 NZ_PJUR01000025.1 Protein Homology CDS 19878 20234 . - 0 ID=cds-WP_031253623.1;Parent=gene-CYJ01_RS09285;Dbxref=GenBank:WP_031253623.1;Name=WP_031253623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479305.1;locus_tag=CYJ01_RS09285;product=arsenate reductase family protein;protein_id=WP_031253623.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 20518 20838 . + . ID=gene-CYJ01_RS09290;Name=CYJ01_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09290;old_locus_tag=CYJ01_09290 NZ_PJUR01000025.1 Protein Homology CDS 20518 20838 . + 0 ID=cds-WP_014614458.1;Parent=gene-CYJ01_RS09290;Dbxref=GenBank:WP_014614458.1;Name=WP_014614458.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168947.1;locus_tag=CYJ01_RS09290;product=thioredoxin family protein;protein_id=WP_014614458.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 20968 21513 . - . ID=gene-CYJ01_RS09295;Name=CYJ01_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09295;old_locus_tag=CYJ01_09295 NZ_PJUR01000025.1 Protein Homology CDS 20968 21513 . - 0 ID=cds-WP_014614459.1;Parent=gene-CYJ01_RS09295;Dbxref=GenBank:WP_014614459.1;Name=WP_014614459.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614459.1;locus_tag=CYJ01_RS09295;product=nitroreductase family protein;protein_id=WP_014614459.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 21568 22293 . - . ID=gene-CYJ01_RS09300;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CYJ01_RS09300;old_locus_tag=CYJ01_09300 NZ_PJUR01000025.1 Protein Homology CDS 21568 22293 . - 0 ID=cds-WP_014614460.1;Parent=gene-CYJ01_RS09300;Dbxref=GenBank:WP_014614460.1;Name=WP_014614460.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=CYJ01_RS09300;product=type I 3-dehydroquinate dehydratase;protein_id=WP_014614460.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 22314 23318 . - . ID=gene-CYJ01_RS09305;Name=CYJ01_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09305;old_locus_tag=CYJ01_09305 NZ_PJUR01000025.1 Protein Homology CDS 22314 23318 . - 0 ID=cds-WP_101457494.1;Parent=gene-CYJ01_RS09305;Dbxref=GenBank:WP_101457494.1;Name=WP_101457494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614461.1;locus_tag=CYJ01_RS09305;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_101457494.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 23467 23886 . + . ID=gene-CYJ01_RS09310;Name=CYJ01_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09310;old_locus_tag=CYJ01_09310 NZ_PJUR01000025.1 Protein Homology CDS 23467 23886 . + 0 ID=cds-WP_031253630.1;Parent=gene-CYJ01_RS09310;Dbxref=GenBank:WP_031253630.1;Name=WP_031253630.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637484.1;locus_tag=CYJ01_RS09310;product=Ohr family peroxiredoxin;protein_id=WP_031253630.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 24309 24797 . + . ID=gene-CYJ01_RS09315;Name=CYJ01_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09315;old_locus_tag=CYJ01_09315 NZ_PJUR01000025.1 Protein Homology CDS 24309 24797 . + 0 ID=cds-WP_014614463.1;Parent=gene-CYJ01_RS09315;Dbxref=GenBank:WP_014614463.1;Name=WP_014614463.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614463.1;locus_tag=CYJ01_RS09315;product=GNAT family N-acetyltransferase;protein_id=WP_014614463.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 24808 25179 . + . ID=gene-CYJ01_RS09320;Name=CYJ01_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09320;old_locus_tag=CYJ01_09320 NZ_PJUR01000025.1 Protein Homology CDS 24808 25179 . + 0 ID=cds-WP_014614464.1;Parent=gene-CYJ01_RS09320;Dbxref=GenBank:WP_014614464.1;Name=WP_014614464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=CYJ01_RS09320;product=DUF1722 domain-containing protein;protein_id=WP_014614464.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 25236 26459 . - . ID=gene-CYJ01_RS09325;Name=CYJ01_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09325;old_locus_tag=CYJ01_09325 NZ_PJUR01000025.1 Protein Homology CDS 25236 26459 . - 0 ID=cds-WP_014614465.1;Parent=gene-CYJ01_RS09325;Dbxref=GenBank:WP_014614465.1;Name=WP_014614465.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728783.1;locus_tag=CYJ01_RS09325;product=serine hydrolase domain-containing protein;protein_id=WP_014614465.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 27049 27516 . + . ID=gene-CYJ01_RS09330;Name=CYJ01_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09330;old_locus_tag=CYJ01_09330 NZ_PJUR01000025.1 Protein Homology CDS 27049 27516 . + 0 ID=cds-WP_101457495.1;Parent=gene-CYJ01_RS09330;Dbxref=GenBank:WP_101457495.1;Name=WP_101457495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550254.1;locus_tag=CYJ01_RS09330;product=DUF6978 family protein;protein_id=WP_101457495.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 27529 28320 . + . ID=gene-CYJ01_RS09335;Name=CYJ01_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09335;old_locus_tag=CYJ01_09335 NZ_PJUR01000025.1 Protein Homology CDS 27529 28320 . + 0 ID=cds-WP_065354459.1;Parent=gene-CYJ01_RS09335;Dbxref=GenBank:WP_065354459.1;Name=WP_065354459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670134.1;locus_tag=CYJ01_RS09335;product=DUF1828 domain-containing protein;protein_id=WP_065354459.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 28514 29308 . - . ID=gene-CYJ01_RS09340;Name=CYJ01_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09340;old_locus_tag=CYJ01_09340 NZ_PJUR01000025.1 Protein Homology CDS 28514 29308 . - 0 ID=cds-WP_014614473.1;Parent=gene-CYJ01_RS09340;Dbxref=GenBank:WP_014614473.1;Name=WP_014614473.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614473.1;locus_tag=CYJ01_RS09340;product=exotoxin OB-fold domain-containing protein;protein_id=WP_014614473.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 29855 30697 . - . ID=gene-CYJ01_RS09345;Name=CYJ01_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09345;old_locus_tag=CYJ01_09345 NZ_PJUR01000025.1 Protein Homology CDS 29855 30697 . - 0 ID=cds-WP_101457496.1;Parent=gene-CYJ01_RS09345;Dbxref=GenBank:WP_101457496.1;Name=WP_101457496.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=CYJ01_RS09345;product=trypsin-like serine peptidase;protein_id=WP_101457496.1;transl_table=11 NZ_PJUR01000025.1 RefSeq gene 31017 31582 . - . ID=gene-CYJ01_RS09350;Name=CYJ01_RS09350;end_range=31582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09350;old_locus_tag=CYJ01_09350;partial=true NZ_PJUR01000025.1 Protein Homology CDS 31017 31582 . - 2 ID=cds-WP_274539892.1;Parent=gene-CYJ01_RS09350;Dbxref=GenBank:WP_274539892.1;Name=WP_274539892.1;end_range=31582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS09350;partial=true;product=group II intron maturase-specific domain-containing protein;protein_id=WP_274539892.1;transl_table=11 ##sequence-region NZ_PJUR01000026.1 1 19346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000026.1 RefSeq region 1 19346 . + . ID=NZ_PJUR01000026.1:1..19346;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000026.1 RefSeq gene 177 1728 . - . ID=gene-CYJ01_RS09355;Name=CYJ01_RS09355;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS09355;old_locus_tag=CYJ01_09355 NZ_PJUR01000026.1 cmsearch rRNA 177 1728 . - . ID=rna-CYJ01_RS09355;Parent=gene-CYJ01_RS09355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS09355;product=16S ribosomal RNA NZ_PJUR01000026.1 cmsearch exon 177 1728 . - . ID=exon-CYJ01_RS09355-1;Parent=rna-CYJ01_RS09355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS09355;product=16S ribosomal RNA NZ_PJUR01000026.1 RefSeq gene 1863 1936 . - . ID=gene-CYJ01_RS09360;Name=CYJ01_RS09360;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09360;old_locus_tag=CYJ01_09360 NZ_PJUR01000026.1 tRNAscan-SE tRNA 1863 1936 . - . ID=rna-CYJ01_RS09360;Parent=gene-CYJ01_RS09360;anticodon=(pos:complement(1902..1904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09360;product=tRNA-Gly NZ_PJUR01000026.1 tRNAscan-SE exon 1863 1936 . - . ID=exon-CYJ01_RS09360-1;Parent=rna-CYJ01_RS09360;anticodon=(pos:complement(1902..1904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09360;product=tRNA-Gly NZ_PJUR01000026.1 RefSeq gene 1961 2043 . - . ID=gene-CYJ01_RS09365;Name=CYJ01_RS09365;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09365;old_locus_tag=CYJ01_09365 NZ_PJUR01000026.1 tRNAscan-SE tRNA 1961 2043 . - . ID=rna-CYJ01_RS09365;Parent=gene-CYJ01_RS09365;anticodon=(pos:complement(2008..2010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09365;product=tRNA-Leu NZ_PJUR01000026.1 tRNAscan-SE exon 1961 2043 . - . ID=exon-CYJ01_RS09365-1;Parent=rna-CYJ01_RS09365;anticodon=(pos:complement(2008..2010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09365;product=tRNA-Leu NZ_PJUR01000026.1 RefSeq gene 2398 2850 . - . ID=gene-CYJ01_RS09370;Name=CYJ01_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09370;old_locus_tag=CYJ01_09370 NZ_PJUR01000026.1 Protein Homology CDS 2398 2850 . - 0 ID=cds-WP_015729426.1;Parent=gene-CYJ01_RS09370;Dbxref=GenBank:WP_015729426.1;Name=WP_015729426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219959.1;locus_tag=CYJ01_RS09370;product=SprT family protein;protein_id=WP_015729426.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 2843 4993 . - . ID=gene-CYJ01_RS09375;Name=CYJ01_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09375;old_locus_tag=CYJ01_09375 NZ_PJUR01000026.1 Protein Homology CDS 2843 4993 . - 0 ID=cds-WP_101457497.1;Parent=gene-CYJ01_RS09375;Dbxref=GenBank:WP_101457497.1;Name=WP_101457497.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505949.1;locus_tag=CYJ01_RS09375;product=Tex family protein;protein_id=WP_101457497.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 5272 6042 . - . ID=gene-CYJ01_RS09380;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09380;old_locus_tag=CYJ01_09380 NZ_PJUR01000026.1 Protein Homology CDS 5272 6042 . - 0 ID=cds-WP_015729428.1;Parent=gene-CYJ01_RS09380;Dbxref=GenBank:WP_015729428.1;Name=WP_015729428.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CYJ01_RS09380;product=RNA polymerase sigma factor SigB;protein_id=WP_015729428.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 6017 6496 . - . ID=gene-CYJ01_RS09385;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=CYJ01_RS09385;old_locus_tag=CYJ01_09385 NZ_PJUR01000026.1 Protein Homology CDS 6017 6496 . - 0 ID=cds-WP_031253870.1;Parent=gene-CYJ01_RS09385;Dbxref=GenBank:WP_031253870.1;Name=WP_031253870.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169269.1;locus_tag=CYJ01_RS09385;product=anti-sigma B factor RsbW;protein_id=WP_031253870.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 6496 6822 . - . ID=gene-CYJ01_RS09390;Name=CYJ01_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09390;old_locus_tag=CYJ01_09390 NZ_PJUR01000026.1 Protein Homology CDS 6496 6822 . - 0 ID=cds-WP_014613381.1;Parent=gene-CYJ01_RS09390;Dbxref=GenBank:WP_014613381.1;Name=WP_014613381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CYJ01_RS09390;product=anti-sigma factor antagonist;protein_id=WP_014613381.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 6901 7905 . - . ID=gene-CYJ01_RS09395;Name=CYJ01_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09395;old_locus_tag=CYJ01_09395 NZ_PJUR01000026.1 Protein Homology CDS 6901 7905 . - 0 ID=cds-WP_014613380.1;Parent=gene-CYJ01_RS09395;Dbxref=GenBank:WP_014613380.1;Name=WP_014613380.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613380.1;locus_tag=CYJ01_RS09395;product=SpoIIE family protein phosphatase;protein_id=WP_014613380.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 7963 8316 . - . ID=gene-CYJ01_RS09400;Name=CYJ01_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09400;old_locus_tag=CYJ01_09400 NZ_PJUR01000026.1 Protein Homology CDS 7963 8316 . - 0 ID=cds-WP_014613379.1;Parent=gene-CYJ01_RS09400;Dbxref=GenBank:WP_014613379.1;Name=WP_014613379.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=CYJ01_RS09400;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014613379.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 8317 8487 . - . ID=gene-CYJ01_RS09405;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=CYJ01_RS09405;old_locus_tag=CYJ01_09405 NZ_PJUR01000026.1 Protein Homology CDS 8317 8487 . - 0 ID=cds-WP_014613378.1;Parent=gene-CYJ01_RS09405;Dbxref=GenBank:WP_014613378.1;Name=WP_014613378.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=CYJ01_RS09405;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_014613378.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 8572 9720 . - . ID=gene-CYJ01_RS09410;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ01_RS09410;old_locus_tag=CYJ01_09410 NZ_PJUR01000026.1 Protein Homology CDS 8572 9720 . - 0 ID=cds-WP_065354670.1;Parent=gene-CYJ01_RS09410;Dbxref=GenBank:WP_065354670.1;Name=WP_065354670.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=CYJ01_RS09410;product=alanine racemase;protein_id=WP_065354670.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 9754 10104 . - . ID=gene-CYJ01_RS09415;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CYJ01_RS09415;old_locus_tag=CYJ01_09415 NZ_PJUR01000026.1 Protein Homology CDS 9754 10104 . - 0 ID=cds-WP_014613376.1;Parent=gene-CYJ01_RS09415;Dbxref=GenBank:WP_014613376.1;Name=WP_014613376.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165830.1;locus_tag=CYJ01_RS09415;product=holo-ACP synthase;protein_id=WP_014613376.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 10101 10619 . - . ID=gene-CYJ01_RS09420;Name=CYJ01_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09420;old_locus_tag=CYJ01_09420 NZ_PJUR01000026.1 Protein Homology CDS 10101 10619 . - 0 ID=cds-WP_014613375.1;Parent=gene-CYJ01_RS09420;Dbxref=GenBank:WP_014613375.1;Name=WP_014613375.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165829.1;locus_tag=CYJ01_RS09420;product=PH domain-containing protein;protein_id=WP_014613375.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 10603 12132 . - . ID=gene-CYJ01_RS09425;Name=CYJ01_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09425;old_locus_tag=CYJ01_09425 NZ_PJUR01000026.1 Protein Homology CDS 10603 12132 . - 0 ID=cds-WP_101457498.1;Parent=gene-CYJ01_RS09425;Dbxref=GenBank:WP_101457498.1;Name=WP_101457498.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613374.1;locus_tag=CYJ01_RS09425;product=PH domain-containing protein;protein_id=WP_101457498.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 12125 12598 . - . ID=gene-CYJ01_RS09430;Name=CYJ01_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09430;old_locus_tag=CYJ01_09430 NZ_PJUR01000026.1 Protein Homology CDS 12125 12598 . - 0 ID=cds-WP_014613373.1;Parent=gene-CYJ01_RS09430;Dbxref=GenBank:WP_014613373.1;Name=WP_014613373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165827.1;locus_tag=CYJ01_RS09430;product=PH domain-containing protein;protein_id=WP_014613373.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 12837 14324 . - . ID=gene-CYJ01_RS09435;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09435;old_locus_tag=CYJ01_09435 NZ_PJUR01000026.1 Protein Homology CDS 12837 14324 . - 0 ID=cds-WP_014613372.1;Parent=gene-CYJ01_RS09435;Dbxref=GenBank:WP_014613372.1;Name=WP_014613372.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=CYJ01_RS09435;product=degradosome RNA helicase CshA;protein_id=WP_014613372.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 14605 15969 . - . ID=gene-CYJ01_RS09440;Name=CYJ01_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09440;old_locus_tag=CYJ01_09440 NZ_PJUR01000026.1 Protein Homology CDS 14605 15969 . - 0 ID=cds-WP_101457499.1;Parent=gene-CYJ01_RS09440;Dbxref=GenBank:WP_101457499.1;Name=WP_101457499.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729431.1;locus_tag=CYJ01_RS09440;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_101457499.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 15981 17051 . - . ID=gene-CYJ01_RS09445;Name=CYJ01_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09445;old_locus_tag=CYJ01_09445 NZ_PJUR01000026.1 Protein Homology CDS 15981 17051 . - 0 ID=cds-WP_014613370.1;Parent=gene-CYJ01_RS09445;Dbxref=GenBank:WP_014613370.1;Name=WP_014613370.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=CYJ01_RS09445;product=D-alanine--D-alanine ligase;protein_id=WP_014613370.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 17205 18413 . + . ID=gene-CYJ01_RS09450;Name=CYJ01_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09450;old_locus_tag=CYJ01_09450 NZ_PJUR01000026.1 Protein Homology CDS 17205 18413 . + 0 ID=cds-WP_063279124.1;Parent=gene-CYJ01_RS09450;Dbxref=GenBank:WP_063279124.1;Name=WP_063279124.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165823.1;locus_tag=CYJ01_RS09450;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_063279124.1;transl_table=11 NZ_PJUR01000026.1 RefSeq gene 18463 19191 . - . ID=gene-CYJ01_RS09455;Name=CYJ01_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09455;old_locus_tag=CYJ01_09455 NZ_PJUR01000026.1 Protein Homology CDS 18463 19191 . - 0 ID=cds-WP_101457500.1;Parent=gene-CYJ01_RS09455;Dbxref=GenBank:WP_101457500.1;Name=WP_101457500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613368.1;locus_tag=CYJ01_RS09455;product=peptidase;protein_id=WP_101457500.1;transl_table=11 ##sequence-region NZ_PJUR01000027.1 1 36794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000027.1 RefSeq region 1 36794 . + . ID=NZ_PJUR01000027.1:1..36794;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000027.1 RefSeq gene 1 565 . - . ID=gene-CYJ01_RS09460;Name=CYJ01_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09460;old_locus_tag=CYJ01_09460;partial=true;start_range=.,1 NZ_PJUR01000027.1 Protein Homology CDS 1 565 . - 0 ID=cds-WP_423830983.1;Parent=gene-CYJ01_RS09460;Dbxref=GenBank:WP_423830983.1;Name=WP_423830983.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=CYJ01_RS09460;partial=true;product=5'-3' exonuclease;protein_id=WP_423830983.1;start_range=.,1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 1298 2998 . - . ID=gene-CYJ01_RS09465;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=CYJ01_RS09465;old_locus_tag=CYJ01_09465 NZ_PJUR01000027.1 Protein Homology CDS 1298 2998 . - 0 ID=cds-WP_101431337.1;Parent=gene-CYJ01_RS09465;Dbxref=GenBank:WP_101431337.1;Name=WP_101431337.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=CYJ01_RS09465;product=two-component system histidine kinase PnpS;protein_id=WP_101431337.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 2999 3703 . - . ID=gene-CYJ01_RS09470;Name=CYJ01_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09470;old_locus_tag=CYJ01_09470 NZ_PJUR01000027.1 Protein Homology CDS 2999 3703 . - 0 ID=cds-WP_014613681.1;Parent=gene-CYJ01_RS09470;Dbxref=GenBank:WP_014613681.1;Name=WP_014613681.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=CYJ01_RS09470;product=response regulator transcription factor;protein_id=WP_014613681.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 4022 5314 . - . ID=gene-CYJ01_RS09475;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CYJ01_RS09475;old_locus_tag=CYJ01_09475 NZ_PJUR01000027.1 Protein Homology CDS 4022 5314 . - 0 ID=cds-WP_257784255.1;Parent=gene-CYJ01_RS09475;Dbxref=GenBank:WP_257784255.1;Name=WP_257784255.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=CYJ01_RS09475;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_257784255.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 5330 6448 . - . ID=gene-CYJ01_RS09480;Name=CYJ01_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09480;old_locus_tag=CYJ01_09480 NZ_PJUR01000027.1 Protein Homology CDS 5330 6448 . - 0 ID=cds-WP_014613679.1;Parent=gene-CYJ01_RS09480;Dbxref=GenBank:WP_014613679.1;Name=WP_014613679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453430.1;locus_tag=CYJ01_RS09480;product=citrate synthase;protein_id=WP_014613679.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 6872 8632 . - . ID=gene-CYJ01_RS09485;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CYJ01_RS09485;old_locus_tag=CYJ01_09485 NZ_PJUR01000027.1 Protein Homology CDS 6872 8632 . - 0 ID=cds-WP_014613678.1;Parent=gene-CYJ01_RS09485;Dbxref=GenBank:WP_014613678.1;Name=WP_014613678.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=CYJ01_RS09485;product=pyruvate kinase;protein_id=WP_014613678.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 8651 9619 . - . ID=gene-CYJ01_RS09490;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09490;old_locus_tag=CYJ01_09490 NZ_PJUR01000027.1 Protein Homology CDS 8651 9619 . - 0 ID=cds-WP_014613677.1;Parent=gene-CYJ01_RS09490;Dbxref=GenBank:WP_014613677.1;Name=WP_014613677.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=CYJ01_RS09490;product=6-phosphofructokinase;protein_id=WP_014613677.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 10183 11127 . - . ID=gene-CYJ01_RS09495;Name=CYJ01_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09495;old_locus_tag=CYJ01_09495 NZ_PJUR01000027.1 Protein Homology CDS 10183 11127 . - 0 ID=cds-WP_096547995.1;Parent=gene-CYJ01_RS09495;Dbxref=GenBank:WP_096547995.1;Name=WP_096547995.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=CYJ01_RS09495;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_096547995.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 11127 11987 . - . ID=gene-CYJ01_RS09500;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CYJ01_RS09500;old_locus_tag=CYJ01_09500 NZ_PJUR01000027.1 Protein Homology CDS 11127 11987 . - 0 ID=cds-WP_014613675.1;Parent=gene-CYJ01_RS09500;Dbxref=GenBank:WP_014613675.1;Name=WP_014613675.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500314.1;locus_tag=CYJ01_RS09500;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_014613675.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 12032 13264 . - . ID=gene-CYJ01_RS09505;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=CYJ01_RS09505;old_locus_tag=CYJ01_09505 NZ_PJUR01000027.1 Protein Homology CDS 12032 13264 . - 0 ID=cds-WP_014613674.1;Parent=gene-CYJ01_RS09505;Dbxref=GenBank:WP_014613674.1;Name=WP_014613674.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613674.1;locus_tag=CYJ01_RS09505;product=NADP-dependent malic enzyme;protein_id=WP_014613674.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 13407 16598 . - . ID=gene-CYJ01_RS09510;Name=CYJ01_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09510;old_locus_tag=CYJ01_09510 NZ_PJUR01000027.1 Protein Homology CDS 13407 16598 . - 0 ID=cds-WP_101431336.1;Parent=gene-CYJ01_RS09510;Dbxref=GenBank:WP_101431336.1;Name=WP_101431336.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=CYJ01_RS09510;product=DNA polymerase III subunit alpha;protein_id=WP_101431336.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 16623 17555 . - . ID=gene-CYJ01_RS09515;Name=CYJ01_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09515;old_locus_tag=CYJ01_09515 NZ_PJUR01000027.1 Protein Homology CDS 16623 17555 . - 0 ID=cds-WP_037542826.1;Parent=gene-CYJ01_RS09515;Dbxref=GenBank:WP_037542826.1;Name=WP_037542826.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613672.1;locus_tag=CYJ01_RS09515;product=DHH family phosphoesterase;protein_id=WP_037542826.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 17568 18863 . - . ID=gene-CYJ01_RS09520;Name=CYJ01_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09520;old_locus_tag=CYJ01_09520 NZ_PJUR01000027.1 Protein Homology CDS 17568 18863 . - 0 ID=cds-WP_014613671.1;Parent=gene-CYJ01_RS09520;Dbxref=GenBank:WP_014613671.1;Name=WP_014613671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=CYJ01_RS09520;product=DRTGG domain-containing protein;protein_id=WP_014613671.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 19184 19597 . + . ID=gene-CYJ01_RS09525;Name=CYJ01_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09525;old_locus_tag=CYJ01_09525 NZ_PJUR01000027.1 Protein Homology CDS 19184 19597 . + 0 ID=cds-WP_101431335.1;Parent=gene-CYJ01_RS09525;Dbxref=GenBank:WP_101431335.1;Name=WP_101431335.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=CYJ01_RS09525;product=universal stress protein;protein_id=WP_101431335.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 20211 20900 . - . ID=gene-CYJ01_RS09530;Name=CYJ01_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09530;old_locus_tag=CYJ01_09530 NZ_PJUR01000027.1 Protein Homology CDS 20211 20900 . - 0 ID=cds-WP_014613669.1;Parent=gene-CYJ01_RS09530;Dbxref=GenBank:WP_014613669.1;Name=WP_014613669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613669.1;locus_tag=CYJ01_RS09530;product=metal-dependent hydrolase;protein_id=WP_014613669.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 21157 22212 . + . ID=gene-CYJ01_RS09535;Name=CYJ01_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09535;old_locus_tag=CYJ01_09535 NZ_PJUR01000027.1 Protein Homology CDS 21157 22212 . + 0 ID=cds-WP_014613668.1;Parent=gene-CYJ01_RS09535;Dbxref=GenBank:WP_014613668.1;Name=WP_014613668.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=CYJ01_RS09535;product=M24 family metallopeptidase;protein_id=WP_014613668.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 22209 22844 . + . ID=gene-CYJ01_RS09540;Name=CYJ01_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09540;old_locus_tag=CYJ01_09540 NZ_PJUR01000027.1 Protein Homology CDS 22209 22844 . + 0 ID=cds-WP_101431334.1;Parent=gene-CYJ01_RS09540;Dbxref=GenBank:WP_101431334.1;Name=WP_101431334.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220142.1;locus_tag=CYJ01_RS09540;product=copper homeostasis protein CutC;protein_id=WP_101431334.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 22937 24058 . - . ID=gene-CYJ01_RS09545;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CYJ01_RS09545;old_locus_tag=CYJ01_09545 NZ_PJUR01000027.1 Protein Homology CDS 22937 24058 . - 0 ID=cds-WP_014613666.1;Parent=gene-CYJ01_RS09545;Dbxref=GenBank:WP_014613666.1;Name=WP_014613666.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613666.1;locus_tag=CYJ01_RS09545;product=alanine dehydrogenase;protein_id=WP_014613666.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 24206 24709 . + . ID=gene-CYJ01_RS09550;Name=CYJ01_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09550;old_locus_tag=CYJ01_09550 NZ_PJUR01000027.1 Protein Homology CDS 24206 24709 . + 0 ID=cds-WP_014613665.1;Parent=gene-CYJ01_RS09550;Dbxref=GenBank:WP_014613665.1;Name=WP_014613665.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=CYJ01_RS09550;product=universal stress protein;protein_id=WP_014613665.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 24969 26171 . - . ID=gene-CYJ01_RS09555;Name=CYJ01_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09555;old_locus_tag=CYJ01_09555 NZ_PJUR01000027.1 Protein Homology CDS 24969 26171 . - 0 ID=cds-WP_015729302.1;Parent=gene-CYJ01_RS09555;Dbxref=GenBank:WP_015729302.1;Name=WP_015729302.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729302.1;locus_tag=CYJ01_RS09555;product=acetate kinase;protein_id=WP_015729302.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 26250 27197 . - . ID=gene-CYJ01_RS09560;Name=CYJ01_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09560;old_locus_tag=CYJ01_09560 NZ_PJUR01000027.1 Protein Homology CDS 26250 27197 . - 0 ID=cds-WP_041613222.1;Parent=gene-CYJ01_RS09560;Dbxref=GenBank:WP_041613222.1;Name=WP_041613222.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722135.1;locus_tag=CYJ01_RS09560;product=class I SAM-dependent methyltransferase;protein_id=WP_041613222.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 27405 27899 . - . ID=gene-CYJ01_RS09565;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CYJ01_RS09565;old_locus_tag=CYJ01_09565 NZ_PJUR01000027.1 Protein Homology CDS 27405 27899 . - 0 ID=cds-WP_014613662.1;Parent=gene-CYJ01_RS09565;Dbxref=GenBank:WP_014613662.1;Name=WP_014613662.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446674.1;locus_tag=CYJ01_RS09565;product=thiol peroxidase;protein_id=WP_014613662.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 27963 28547 . - . ID=gene-CYJ01_RS09570;Name=CYJ01_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09570;old_locus_tag=CYJ01_09570 NZ_PJUR01000027.1 Protein Homology CDS 27963 28547 . - 0 ID=cds-WP_015729305.1;Parent=gene-CYJ01_RS09570;Dbxref=GenBank:WP_015729305.1;Name=WP_015729305.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613661.1;locus_tag=CYJ01_RS09570;product=RDD family protein;protein_id=WP_015729305.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 28557 29549 . - . ID=gene-CYJ01_RS09575;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09575;old_locus_tag=CYJ01_09575 NZ_PJUR01000027.1 Protein Homology CDS 28557 29549 . - 0 ID=cds-WP_101457501.1;Parent=gene-CYJ01_RS09575;Dbxref=GenBank:WP_101457501.1;Name=WP_101457501.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613660.1;locus_tag=CYJ01_RS09575;product=signal peptide peptidase SppA;protein_id=WP_101457501.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 29706 30479 . - . ID=gene-CYJ01_RS09580;Name=CYJ01_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09580;old_locus_tag=CYJ01_09580 NZ_PJUR01000027.1 Protein Homology CDS 29706 30479 . - 0 ID=cds-WP_037542816.1;Parent=gene-CYJ01_RS09580;Dbxref=GenBank:WP_037542816.1;Name=WP_037542816.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613659.1;locus_tag=CYJ01_RS09580;product=TSUP family transporter;protein_id=WP_037542816.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 30495 31715 . - . ID=gene-CYJ01_RS09585;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CYJ01_RS09585;old_locus_tag=CYJ01_09585 NZ_PJUR01000027.1 Protein Homology CDS 30495 31715 . - 0 ID=cds-WP_100040235.1;Parent=gene-CYJ01_RS09585;Dbxref=GenBank:WP_100040235.1;Name=WP_100040235.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165374.1;locus_tag=CYJ01_RS09585;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_100040235.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 31712 32848 . - . ID=gene-CYJ01_RS09590;Name=CYJ01_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09590;old_locus_tag=CYJ01_09590 NZ_PJUR01000027.1 Protein Homology CDS 31712 32848 . - 0 ID=cds-WP_065354171.1;Parent=gene-CYJ01_RS09590;Dbxref=GenBank:WP_065354171.1;Name=WP_065354171.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=CYJ01_RS09590;product=cysteine desulfurase family protein;protein_id=WP_065354171.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 33073 34773 . - . ID=gene-CYJ01_RS09595;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09595;old_locus_tag=CYJ01_09595 NZ_PJUR01000027.1 Protein Homology CDS 33073 34773 . - 0 ID=cds-WP_014613656.1;Parent=gene-CYJ01_RS09595;Dbxref=GenBank:WP_014613656.1;Name=WP_014613656.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613656.1;locus_tag=CYJ01_RS09595;product=septation ring formation regulator EzrA;protein_id=WP_014613656.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 34956 35411 . + . ID=gene-CYJ01_RS09600;Name=CYJ01_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09600;old_locus_tag=CYJ01_09600 NZ_PJUR01000027.1 Protein Homology CDS 34956 35411 . + 0 ID=cds-WP_063278930.1;Parent=gene-CYJ01_RS09600;Dbxref=GenBank:WP_063278930.1;Name=WP_063278930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613655.1;locus_tag=CYJ01_RS09600;product=GAF domain-containing protein;protein_id=WP_063278930.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 35646 36248 . + . ID=gene-CYJ01_RS09605;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CYJ01_RS09605;old_locus_tag=CYJ01_09605 NZ_PJUR01000027.1 Protein Homology CDS 35646 36248 . + 0 ID=cds-WP_014613654.1;Parent=gene-CYJ01_RS09605;Dbxref=GenBank:WP_014613654.1;Name=WP_014613654.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CYJ01_RS09605;product=30S ribosomal protein S4;protein_id=WP_014613654.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 36302 36550 . - . ID=gene-CYJ01_RS09610;Name=CYJ01_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09610;old_locus_tag=CYJ01_09610 NZ_PJUR01000027.1 Protein Homology CDS 36302 36550 . - 0 ID=cds-WP_226957565.1;Parent=gene-CYJ01_RS09610;Dbxref=GenBank:WP_226957565.1;Name=WP_226957565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165369.1;locus_tag=CYJ01_RS09610;product=hypothetical protein;protein_id=WP_226957565.1;transl_table=11 NZ_PJUR01000027.1 RefSeq gene 36568 36794 . - . ID=gene-CYJ01_RS09615;Name=CYJ01_RS09615;end_range=36794,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09615;old_locus_tag=CYJ01_09615;partial=true NZ_PJUR01000027.1 Protein Homology CDS 36568 36794 . - 2 ID=cds-WP_133121616.1;Parent=gene-CYJ01_RS09615;Dbxref=GenBank:WP_133121616.1;Name=WP_133121616.1;end_range=36794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ01_RS09615;partial=true;product=capsid assembly scaffolding protein Gp46 family protein;protein_id=WP_133121616.1;transl_table=11 ##sequence-region NZ_PJUR01000028.1 1 27607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000028.1 RefSeq region 1 27607 . + . ID=NZ_PJUR01000028.1:1..27607;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000028.1 RefSeq gene 79 154 . - . ID=gene-CYJ01_RS09620;Name=CYJ01_RS09620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09620;old_locus_tag=CYJ01_09620 NZ_PJUR01000028.1 tRNAscan-SE tRNA 79 154 . - . ID=rna-CYJ01_RS09620;Parent=gene-CYJ01_RS09620;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09620;product=tRNA-Ala NZ_PJUR01000028.1 tRNAscan-SE exon 79 154 . - . ID=exon-CYJ01_RS09620-1;Parent=rna-CYJ01_RS09620;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09620;product=tRNA-Ala NZ_PJUR01000028.1 RefSeq gene 172 245 . - . ID=gene-CYJ01_RS09625;Name=CYJ01_RS09625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09625;old_locus_tag=CYJ01_09625 NZ_PJUR01000028.1 tRNAscan-SE tRNA 172 245 . - . ID=rna-CYJ01_RS09625;Parent=gene-CYJ01_RS09625;anticodon=(pos:complement(209..211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09625;product=tRNA-Pro NZ_PJUR01000028.1 tRNAscan-SE exon 172 245 . - . ID=exon-CYJ01_RS09625-1;Parent=rna-CYJ01_RS09625;anticodon=(pos:complement(209..211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09625;product=tRNA-Pro NZ_PJUR01000028.1 RefSeq gene 255 331 . - . ID=gene-CYJ01_RS09630;Name=CYJ01_RS09630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09630;old_locus_tag=CYJ01_09630 NZ_PJUR01000028.1 tRNAscan-SE tRNA 255 331 . - . ID=rna-CYJ01_RS09630;Parent=gene-CYJ01_RS09630;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09630;product=tRNA-Arg NZ_PJUR01000028.1 tRNAscan-SE exon 255 331 . - . ID=exon-CYJ01_RS09630-1;Parent=rna-CYJ01_RS09630;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09630;product=tRNA-Arg NZ_PJUR01000028.1 RefSeq gene 343 431 . - . ID=gene-CYJ01_RS09635;Name=CYJ01_RS09635;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09635;old_locus_tag=CYJ01_09635 NZ_PJUR01000028.1 tRNAscan-SE tRNA 343 431 . - . ID=rna-CYJ01_RS09635;Parent=gene-CYJ01_RS09635;anticodon=(pos:complement(395..397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09635;product=tRNA-Leu NZ_PJUR01000028.1 tRNAscan-SE exon 343 431 . - . ID=exon-CYJ01_RS09635-1;Parent=rna-CYJ01_RS09635;anticodon=(pos:complement(395..397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09635;product=tRNA-Leu NZ_PJUR01000028.1 RefSeq gene 440 514 . - . ID=gene-CYJ01_RS09640;Name=CYJ01_RS09640;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09640;old_locus_tag=CYJ01_09640 NZ_PJUR01000028.1 tRNAscan-SE tRNA 440 514 . - . ID=rna-CYJ01_RS09640;Parent=gene-CYJ01_RS09640;anticodon=(pos:complement(480..482));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09640;product=tRNA-Gly NZ_PJUR01000028.1 tRNAscan-SE exon 440 514 . - . ID=exon-CYJ01_RS09640-1;Parent=rna-CYJ01_RS09640;anticodon=(pos:complement(480..482));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09640;product=tRNA-Gly NZ_PJUR01000028.1 RefSeq gene 530 605 . - . ID=gene-CYJ01_RS09645;Name=CYJ01_RS09645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09645;old_locus_tag=CYJ01_09645 NZ_PJUR01000028.1 tRNAscan-SE tRNA 530 605 . - . ID=rna-CYJ01_RS09645;Parent=gene-CYJ01_RS09645;anticodon=(pos:complement(570..572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09645;product=tRNA-Lys NZ_PJUR01000028.1 tRNAscan-SE exon 530 605 . - . ID=exon-CYJ01_RS09645-1;Parent=rna-CYJ01_RS09645;anticodon=(pos:complement(570..572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09645;product=tRNA-Lys NZ_PJUR01000028.1 RefSeq gene 609 683 . - . ID=gene-CYJ01_RS09650;Name=CYJ01_RS09650;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09650;old_locus_tag=CYJ01_09650 NZ_PJUR01000028.1 tRNAscan-SE tRNA 609 683 . - . ID=rna-CYJ01_RS09650;Parent=gene-CYJ01_RS09650;anticodon=(pos:complement(649..651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09650;product=tRNA-Gln NZ_PJUR01000028.1 tRNAscan-SE exon 609 683 . - . ID=exon-CYJ01_RS09650-1;Parent=rna-CYJ01_RS09650;anticodon=(pos:complement(649..651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09650;product=tRNA-Gln NZ_PJUR01000028.1 RefSeq gene 700 772 . - . ID=gene-CYJ01_RS09655;Name=CYJ01_RS09655;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09655;old_locus_tag=CYJ01_09655 NZ_PJUR01000028.1 tRNAscan-SE tRNA 700 772 . - . ID=rna-CYJ01_RS09655;Parent=gene-CYJ01_RS09655;anticodon=(pos:complement(737..739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09655;product=tRNA-His NZ_PJUR01000028.1 tRNAscan-SE exon 700 772 . - . ID=exon-CYJ01_RS09655-1;Parent=rna-CYJ01_RS09655;anticodon=(pos:complement(737..739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09655;product=tRNA-His NZ_PJUR01000028.1 RefSeq gene 775 848 . - . ID=gene-CYJ01_RS09660;Name=CYJ01_RS09660;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09660;old_locus_tag=CYJ01_09660 NZ_PJUR01000028.1 tRNAscan-SE tRNA 775 848 . - . ID=rna-CYJ01_RS09660;Parent=gene-CYJ01_RS09660;anticodon=(pos:complement(814..816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09660;product=tRNA-Trp NZ_PJUR01000028.1 tRNAscan-SE exon 775 848 . - . ID=exon-CYJ01_RS09660-1;Parent=rna-CYJ01_RS09660;anticodon=(pos:complement(814..816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09660;product=tRNA-Trp NZ_PJUR01000028.1 RefSeq gene 856 939 . - . ID=gene-CYJ01_RS09665;Name=CYJ01_RS09665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09665;old_locus_tag=CYJ01_09665 NZ_PJUR01000028.1 tRNAscan-SE tRNA 856 939 . - . ID=rna-CYJ01_RS09665;Parent=gene-CYJ01_RS09665;anticodon=(pos:complement(903..905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09665;product=tRNA-Tyr NZ_PJUR01000028.1 tRNAscan-SE exon 856 939 . - . ID=exon-CYJ01_RS09665-1;Parent=rna-CYJ01_RS09665;anticodon=(pos:complement(903..905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09665;product=tRNA-Tyr NZ_PJUR01000028.1 RefSeq gene 960 1035 . - . ID=gene-CYJ01_RS09670;Name=CYJ01_RS09670;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09670;old_locus_tag=CYJ01_09670 NZ_PJUR01000028.1 tRNAscan-SE tRNA 960 1035 . - . ID=rna-CYJ01_RS09670;Parent=gene-CYJ01_RS09670;anticodon=(pos:complement(1000..1002));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09670;product=tRNA-Val NZ_PJUR01000028.1 tRNAscan-SE exon 960 1035 . - . ID=exon-CYJ01_RS09670-1;Parent=rna-CYJ01_RS09670;anticodon=(pos:complement(1000..1002));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09670;product=tRNA-Val NZ_PJUR01000028.1 RefSeq gene 1045 1116 . - . ID=gene-CYJ01_RS09675;Name=CYJ01_RS09675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09675;old_locus_tag=CYJ01_09675 NZ_PJUR01000028.1 tRNAscan-SE tRNA 1045 1116 . - . ID=rna-CYJ01_RS09675;Parent=gene-CYJ01_RS09675;anticodon=(pos:complement(1081..1083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09675;product=tRNA-Glu NZ_PJUR01000028.1 tRNAscan-SE exon 1045 1116 . - . ID=exon-CYJ01_RS09675-1;Parent=rna-CYJ01_RS09675;anticodon=(pos:complement(1081..1083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09675;product=tRNA-Glu NZ_PJUR01000028.1 RefSeq gene 1118 1192 . - . ID=gene-CYJ01_RS09680;Name=CYJ01_RS09680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09680;old_locus_tag=CYJ01_09680 NZ_PJUR01000028.1 tRNAscan-SE tRNA 1118 1192 . - . ID=rna-CYJ01_RS09680;Parent=gene-CYJ01_RS09680;anticodon=(pos:complement(1158..1160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09680;product=tRNA-Asn NZ_PJUR01000028.1 tRNAscan-SE exon 1118 1192 . - . ID=exon-CYJ01_RS09680-1;Parent=rna-CYJ01_RS09680;anticodon=(pos:complement(1158..1160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09680;product=tRNA-Asn NZ_PJUR01000028.1 RefSeq gene 1405 2022 . - . ID=gene-CYJ01_RS09685;Name=CYJ01_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09685;old_locus_tag=CYJ01_09685 NZ_PJUR01000028.1 Protein Homology CDS 1405 2022 . - 0 ID=cds-WP_015728925.1;Parent=gene-CYJ01_RS09685;Dbxref=GenBank:WP_015728925.1;Name=WP_015728925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614331.1;locus_tag=CYJ01_RS09685;product=competence protein ComK;protein_id=WP_015728925.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 2259 2477 . + . ID=gene-CYJ01_RS09690;Name=CYJ01_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09690;old_locus_tag=CYJ01_09690 NZ_PJUR01000028.1 Protein Homology CDS 2259 2477 . + 0 ID=cds-WP_014614330.1;Parent=gene-CYJ01_RS09690;Dbxref=GenBank:WP_014614330.1;Name=WP_014614330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=CYJ01_RS09690;product=IDEAL domain-containing protein;protein_id=WP_014614330.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 2699 3691 . - . ID=gene-CYJ01_RS09695;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=CYJ01_RS09695;old_locus_tag=CYJ01_09695 NZ_PJUR01000028.1 Protein Homology CDS 2699 3691 . - 0 ID=cds-WP_101457502.1;Parent=gene-CYJ01_RS09695;Dbxref=GenBank:WP_101457502.1;Name=WP_101457502.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=CYJ01_RS09695;product=lipoate--protein ligase;protein_id=WP_101457502.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 3879 4064 . + . ID=gene-CYJ01_RS09700;Name=CYJ01_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09700;old_locus_tag=CYJ01_09700 NZ_PJUR01000028.1 Protein Homology CDS 3879 4064 . + 0 ID=cds-WP_014614328.1;Parent=gene-CYJ01_RS09700;Dbxref=GenBank:WP_014614328.1;Name=WP_014614328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=CYJ01_RS09700;product=YkvS family protein;protein_id=WP_014614328.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 4071 4673 . + . ID=gene-CYJ01_RS09705;Name=CYJ01_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09705;old_locus_tag=CYJ01_09705 NZ_PJUR01000028.1 Protein Homology CDS 4071 4673 . + 0 ID=cds-WP_014614327.1;Parent=gene-CYJ01_RS09705;Dbxref=GenBank:WP_014614327.1;Name=WP_014614327.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=CYJ01_RS09705;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_014614327.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 4820 5230 . - . ID=gene-CYJ01_RS09710;Name=CYJ01_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09710;old_locus_tag=CYJ01_09710 NZ_PJUR01000028.1 Protein Homology CDS 4820 5230 . - 0 ID=cds-WP_015728927.1;Parent=gene-CYJ01_RS09710;Dbxref=GenBank:WP_015728927.1;Name=WP_015728927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728927.1;locus_tag=CYJ01_RS09710;product=YolD-like family protein;protein_id=WP_015728927.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 5369 5944 . + . ID=gene-CYJ01_RS09715;Name=CYJ01_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09715;old_locus_tag=CYJ01_09715 NZ_PJUR01000028.1 Protein Homology CDS 5369 5944 . + 0 ID=cds-WP_015728928.1;Parent=gene-CYJ01_RS09715;Dbxref=GenBank:WP_015728928.1;Name=WP_015728928.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=CYJ01_RS09715;product=GNAT family N-acetyltransferase;protein_id=WP_015728928.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 5937 6587 . + . ID=gene-CYJ01_RS09720;Name=CYJ01_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09720;old_locus_tag=CYJ01_09720 NZ_PJUR01000028.1 Protein Homology CDS 5937 6587 . + 0 ID=cds-WP_014614322.1;Parent=gene-CYJ01_RS09720;Dbxref=GenBank:WP_014614322.1;Name=WP_014614322.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=CYJ01_RS09720;product=ABC transporter ATP-binding protein;protein_id=WP_014614322.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 6584 7348 . + . ID=gene-CYJ01_RS09725;Name=CYJ01_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09725;old_locus_tag=CYJ01_09725 NZ_PJUR01000028.1 Protein Homology CDS 6584 7348 . + 0 ID=cds-WP_015728929.1;Parent=gene-CYJ01_RS09725;Dbxref=GenBank:WP_015728929.1;Name=WP_015728929.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165637.1;locus_tag=CYJ01_RS09725;product=ABC transporter permease;protein_id=WP_015728929.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 7664 8602 . - . ID=gene-CYJ01_RS09730;Name=CYJ01_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09730;old_locus_tag=CYJ01_09730 NZ_PJUR01000028.1 Protein Homology CDS 7664 8602 . - 0 ID=cds-WP_014614320.1;Parent=gene-CYJ01_RS09730;Dbxref=GenBank:WP_014614320.1;Name=WP_014614320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=CYJ01_RS09730;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_014614320.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 8776 10134 . + . ID=gene-CYJ01_RS09735;Name=CYJ01_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09735;old_locus_tag=CYJ01_09735 NZ_PJUR01000028.1 Protein Homology CDS 8776 10134 . + 0 ID=cds-WP_014614319.1;Parent=gene-CYJ01_RS09735;Dbxref=GenBank:WP_014614319.1;Name=WP_014614319.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=CYJ01_RS09735;product=isochorismate synthase;protein_id=WP_014614319.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 10127 11797 . + . ID=gene-CYJ01_RS09740;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CYJ01_RS09740;old_locus_tag=CYJ01_09740 NZ_PJUR01000028.1 Protein Homology CDS 10127 11797 . + 0 ID=cds-WP_014614318.1;Parent=gene-CYJ01_RS09740;Dbxref=GenBank:WP_014614318.1;Name=WP_014614318.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165634.1;locus_tag=CYJ01_RS09740;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_014614318.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 11784 12575 . + . ID=gene-CYJ01_RS09745;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CYJ01_RS09745;old_locus_tag=CYJ01_09745 NZ_PJUR01000028.1 Protein Homology CDS 11784 12575 . + 0 ID=cds-WP_015728931.1;Parent=gene-CYJ01_RS09745;Dbxref=GenBank:WP_015728931.1;Name=WP_015728931.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220255.1;locus_tag=CYJ01_RS09745;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_015728931.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 12592 13410 . + . ID=gene-CYJ01_RS09750;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09750;old_locus_tag=CYJ01_09750 NZ_PJUR01000028.1 Protein Homology CDS 12592 13410 . + 0 ID=cds-WP_014614316.1;Parent=gene-CYJ01_RS09750;Dbxref=GenBank:WP_014614316.1;Name=WP_014614316.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CYJ01_RS09750;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014614316.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 13599 14759 . - . ID=gene-CYJ01_RS09755;Name=CYJ01_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09755;old_locus_tag=CYJ01_09755 NZ_PJUR01000028.1 Protein Homology CDS 13599 14759 . - 0 ID=cds-WP_101457503.1;Parent=gene-CYJ01_RS09755;Dbxref=GenBank:WP_101457503.1;Name=WP_101457503.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165632.1;locus_tag=CYJ01_RS09755;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101457503.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 14874 15884 . - . ID=gene-CYJ01_RS09760;Name=CYJ01_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09760;old_locus_tag=CYJ01_09760 NZ_PJUR01000028.1 Protein Homology CDS 14874 15884 . - 0 ID=cds-WP_101457504.1;Parent=gene-CYJ01_RS09760;Dbxref=GenBank:WP_101457504.1;Name=WP_101457504.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=CYJ01_RS09760;product=acyltransferase family protein;protein_id=WP_101457504.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 16243 18048 . + . ID=gene-CYJ01_RS09765;Name=CYJ01_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09765;old_locus_tag=CYJ01_09765 NZ_PJUR01000028.1 Protein Homology CDS 16243 18048 . + 0 ID=cds-WP_100006704.1;Parent=gene-CYJ01_RS09765;Dbxref=GenBank:WP_100006704.1;Name=WP_100006704.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614313.1;locus_tag=CYJ01_RS09765;product=acyltransferase family protein;protein_id=WP_100006704.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 18497 22663 . - . ID=gene-CYJ01_RS09770;Name=CYJ01_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09770;old_locus_tag=CYJ01_09770 NZ_PJUR01000028.1 Protein Homology CDS 18497 22663 . - 0 ID=cds-WP_101457505.1;Parent=gene-CYJ01_RS09770;Dbxref=GenBank:WP_101457505.1;Name=WP_101457505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614312.1;locus_tag=CYJ01_RS09770;product=GW dipeptide domain-containing protein;protein_id=WP_101457505.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 22989 23417 . - . ID=gene-CYJ01_RS09775;Name=CYJ01_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09775;old_locus_tag=CYJ01_09775 NZ_PJUR01000028.1 Protein Homology CDS 22989 23417 . - 0 ID=cds-WP_065520586.1;Parent=gene-CYJ01_RS09775;Dbxref=GenBank:WP_065520586.1;Name=WP_065520586.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614311.1;locus_tag=CYJ01_RS09775;product=GNAT family N-acetyltransferase;protein_id=WP_065520586.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 23612 24082 . - . ID=gene-CYJ01_RS09780;Name=CYJ01_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09780;old_locus_tag=CYJ01_09780 NZ_PJUR01000028.1 Protein Homology CDS 23612 24082 . - 0 ID=cds-WP_014614310.1;Parent=gene-CYJ01_RS09780;Dbxref=GenBank:WP_014614310.1;Name=WP_014614310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462674.1;locus_tag=CYJ01_RS09780;product=DUF2538 family protein;protein_id=WP_014614310.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 24097 25275 . - . ID=gene-CYJ01_RS09785;Name=CYJ01_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09785;old_locus_tag=CYJ01_09785 NZ_PJUR01000028.1 Protein Homology CDS 24097 25275 . - 0 ID=cds-WP_014614309.1;Parent=gene-CYJ01_RS09785;Dbxref=GenBank:WP_014614309.1;Name=WP_014614309.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220253.1;locus_tag=CYJ01_RS09785;product=LCP family protein;protein_id=WP_014614309.1;transl_table=11 NZ_PJUR01000028.1 RefSeq gene 25507 27150 . + . ID=gene-CYJ01_RS09790;Name=CYJ01_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09790;old_locus_tag=CYJ01_09790 NZ_PJUR01000028.1 Protein Homology CDS 25507 27150 . + 0 ID=cds-WP_198587999.1;Parent=gene-CYJ01_RS09790;Dbxref=GenBank:WP_198587999.1;Name=WP_198587999.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614307.1;locus_tag=CYJ01_RS09790;product=phospho-sugar mutase;protein_id=WP_198587999.1;transl_table=11 ##sequence-region NZ_PJUR01000029.1 1 34279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000029.1 RefSeq region 1 34279 . + . ID=NZ_PJUR01000029.1:1..34279;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000029.1 RefSeq gene 542 625 . + . ID=gene-CYJ01_RS09800;Name=CYJ01_RS09800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS09800;old_locus_tag=CYJ01_09800 NZ_PJUR01000029.1 tRNAscan-SE tRNA 542 625 . + . ID=rna-CYJ01_RS09800;Parent=gene-CYJ01_RS09800;anticodon=(pos:576..578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09800;product=tRNA-Leu NZ_PJUR01000029.1 tRNAscan-SE exon 542 625 . + . ID=exon-CYJ01_RS09800-1;Parent=rna-CYJ01_RS09800;anticodon=(pos:576..578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS09800;product=tRNA-Leu NZ_PJUR01000029.1 RefSeq gene 1221 2279 . + . ID=gene-CYJ01_RS09805;Name=CYJ01_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09805;old_locus_tag=CYJ01_09805 NZ_PJUR01000029.1 Protein Homology CDS 1221 2279 . + 0 ID=cds-WP_014613526.1;Parent=gene-CYJ01_RS09805;Dbxref=GenBank:WP_014613526.1;Name=WP_014613526.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613526.1;locus_tag=CYJ01_RS09805;product=PTS sugar transporter subunit IIC;protein_id=WP_014613526.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 2465 3925 . + . ID=gene-CYJ01_RS09810;Name=CYJ01_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09810;old_locus_tag=CYJ01_09810 NZ_PJUR01000029.1 Protein Homology CDS 2465 3925 . + 0 ID=cds-WP_101431651.1;Parent=gene-CYJ01_RS09810;Dbxref=GenBank:WP_101431651.1;Name=WP_101431651.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470402.1;locus_tag=CYJ01_RS09810;product=ABC transporter substrate-binding protein/permease;protein_id=WP_101431651.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 3918 4643 . + . ID=gene-CYJ01_RS09815;Name=CYJ01_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09815;old_locus_tag=CYJ01_09815 NZ_PJUR01000029.1 Protein Homology CDS 3918 4643 . + 0 ID=cds-WP_015729369.1;Parent=gene-CYJ01_RS09815;Dbxref=GenBank:WP_015729369.1;Name=WP_015729369.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613528.1;locus_tag=CYJ01_RS09815;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_015729369.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 4799 5929 . + . ID=gene-CYJ01_RS09820;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CYJ01_RS09820;old_locus_tag=CYJ01_09820 NZ_PJUR01000029.1 Protein Homology CDS 4799 5929 . + 0 ID=cds-WP_015729368.1;Parent=gene-CYJ01_RS09820;Dbxref=GenBank:WP_015729368.1;Name=WP_015729368.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613529.1;locus_tag=CYJ01_RS09820;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_015729368.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 5929 6399 . + . ID=gene-CYJ01_RS09825;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CYJ01_RS09825;old_locus_tag=CYJ01_09825 NZ_PJUR01000029.1 Protein Homology CDS 5929 6399 . + 0 ID=cds-WP_014613530.1;Parent=gene-CYJ01_RS09825;Dbxref=GenBank:WP_014613530.1;Name=WP_014613530.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=CYJ01_RS09825;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014613530.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 6592 7191 . + . ID=gene-CYJ01_RS09830;Name=CYJ01_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09830;old_locus_tag=CYJ01_09830 NZ_PJUR01000029.1 Protein Homology CDS 6592 7191 . + 0 ID=cds-WP_101431650.1;Parent=gene-CYJ01_RS09830;Dbxref=GenBank:WP_101431650.1;Name=WP_101431650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167999.1;locus_tag=CYJ01_RS09830;product=6-phosphogluconolactonase;protein_id=WP_101431650.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 7212 7373 . + . ID=gene-CYJ01_RS12145;Name=CYJ01_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12145 NZ_PJUR01000029.1 Protein Homology CDS 7212 7373 . + 0 ID=cds-WP_014613532.1;Parent=gene-CYJ01_RS12145;Dbxref=GenBank:WP_014613532.1;Name=WP_014613532.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=CYJ01_RS12145;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_014613532.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 7494 7937 . + . ID=gene-CYJ01_RS09835;Name=CYJ01_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09835;old_locus_tag=CYJ01_09835 NZ_PJUR01000029.1 Protein Homology CDS 7494 7937 . + 0 ID=cds-WP_037542685.1;Parent=gene-CYJ01_RS09835;Dbxref=GenBank:WP_037542685.1;Name=WP_037542685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164970.1;locus_tag=CYJ01_RS09835;product=hypothetical protein;protein_id=WP_037542685.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 8167 9552 . + . ID=gene-CYJ01_RS09840;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CYJ01_RS09840;old_locus_tag=CYJ01_09840 NZ_PJUR01000029.1 Protein Homology CDS 8167 9552 . + 0 ID=cds-WP_014613534.1;Parent=gene-CYJ01_RS09840;Dbxref=GenBank:WP_014613534.1;Name=WP_014613534.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CYJ01_RS09840;product=class II fumarate hydratase;protein_id=WP_014613534.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 9573 11099 . + . ID=gene-CYJ01_RS09845;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CYJ01_RS09845;old_locus_tag=CYJ01_09845 NZ_PJUR01000029.1 Protein Homology CDS 9573 11099 . + 0 ID=cds-WP_070407788.1;Parent=gene-CYJ01_RS09845;Dbxref=GenBank:WP_070407788.1;Name=WP_070407788.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613535.1;locus_tag=CYJ01_RS09845;product=exopolyphosphatase;protein_id=WP_070407788.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 11181 13343 . + . ID=gene-CYJ01_RS09850;Name=CYJ01_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09850;old_locus_tag=CYJ01_09850 NZ_PJUR01000029.1 Protein Homology CDS 11181 13343 . + 0 ID=cds-WP_423830984.1;Parent=gene-CYJ01_RS09850;Dbxref=GenBank:WP_423830984.1;Name=WP_423830984.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425465.1;locus_tag=CYJ01_RS09850;product=RNA degradosome polyphosphate kinase;protein_id=WP_423830984.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 13411 14241 . - . ID=gene-CYJ01_RS09855;Name=CYJ01_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09855;old_locus_tag=CYJ01_09855 NZ_PJUR01000029.1 Protein Homology CDS 13411 14241 . - 0 ID=cds-WP_101431649.1;Parent=gene-CYJ01_RS09855;Dbxref=GenBank:WP_101431649.1;Name=WP_101431649.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=CYJ01_RS09855;product=RluA family pseudouridine synthase;protein_id=WP_101431649.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 14395 15519 . + . ID=gene-CYJ01_RS09860;Name=CYJ01_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09860;old_locus_tag=CYJ01_09860 NZ_PJUR01000029.1 Protein Homology CDS 14395 15519 . + 0 ID=cds-WP_101431648.1;Parent=gene-CYJ01_RS09860;Dbxref=GenBank:WP_101431648.1;Name=WP_101431648.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729365.1;locus_tag=CYJ01_RS09860;product=GAF domain-containing sensor histidine kinase;protein_id=WP_101431648.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 15519 16145 . + . ID=gene-CYJ01_RS09865;Name=CYJ01_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09865;old_locus_tag=CYJ01_09865 NZ_PJUR01000029.1 Protein Homology CDS 15519 16145 . + 0 ID=cds-WP_037542690.1;Parent=gene-CYJ01_RS09865;Dbxref=GenBank:WP_037542690.1;Name=WP_037542690.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613539.1;locus_tag=CYJ01_RS09865;product=response regulator;protein_id=WP_037542690.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 16295 17581 . - . ID=gene-CYJ01_RS09870;Name=CYJ01_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09870;old_locus_tag=CYJ01_09870 NZ_PJUR01000029.1 Protein Homology CDS 16295 17581 . - 0 ID=cds-WP_101431647.1;Parent=gene-CYJ01_RS09870;Dbxref=GenBank:WP_101431647.1;Name=WP_101431647.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=CYJ01_RS09870;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_101431647.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 17777 18661 . + . ID=gene-CYJ01_RS09875;Name=CYJ01_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09875;old_locus_tag=CYJ01_09875 NZ_PJUR01000029.1 Protein Homology CDS 17777 18661 . + 0 ID=cds-WP_037542692.1;Parent=gene-CYJ01_RS09875;Dbxref=GenBank:WP_037542692.1;Name=WP_037542692.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613541.1;locus_tag=CYJ01_RS09875;product=cation diffusion facilitator family transporter;protein_id=WP_037542692.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 20527 20991 . + . ID=gene-CYJ01_RS09885;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09885;old_locus_tag=CYJ01_09885 NZ_PJUR01000029.1 Protein Homology CDS 20527 20991 . + 0 ID=cds-WP_014613542.1;Parent=gene-CYJ01_RS09885;Dbxref=GenBank:WP_014613542.1;Name=WP_014613542.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=CYJ01_RS09885;product=XRE family transcriptional regulator XdrA;protein_id=WP_014613542.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 21216 22346 . + . ID=gene-CYJ01_RS09890;Name=CYJ01_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09890;old_locus_tag=CYJ01_09890 NZ_PJUR01000029.1 Protein Homology CDS 21216 22346 . + 0 ID=cds-WP_065354145.1;Parent=gene-CYJ01_RS09890;Dbxref=GenBank:WP_065354145.1;Name=WP_065354145.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168012.1;locus_tag=CYJ01_RS09890;product=DUF445 domain-containing protein;protein_id=WP_065354145.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 22435 22779 . + . ID=gene-CYJ01_RS09895;Name=CYJ01_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09895;old_locus_tag=CYJ01_09895 NZ_PJUR01000029.1 Protein Homology CDS 22435 22779 . + 0 ID=cds-WP_014613544.1;Parent=gene-CYJ01_RS09895;Dbxref=GenBank:WP_014613544.1;Name=WP_014613544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CYJ01_RS09895;product=YlbF/YmcA family competence regulator;protein_id=WP_014613544.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 23033 24220 . + . ID=gene-CYJ01_RS09900;Name=CYJ01_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09900;old_locus_tag=CYJ01_09900 NZ_PJUR01000029.1 Protein Homology CDS 23033 24220 . + 0 ID=cds-WP_014613545.1;Parent=gene-CYJ01_RS09900;Dbxref=GenBank:WP_014613545.1;Name=WP_014613545.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=CYJ01_RS09900;product=metallophosphoesterase family protein;protein_id=WP_014613545.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 24224 27148 . + . ID=gene-CYJ01_RS09905;Name=CYJ01_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09905;old_locus_tag=CYJ01_09905 NZ_PJUR01000029.1 Protein Homology CDS 24224 27148 . + 0 ID=cds-WP_101431646.1;Parent=gene-CYJ01_RS09905;Dbxref=GenBank:WP_101431646.1;Name=WP_101431646.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=CYJ01_RS09905;product=AAA family ATPase;protein_id=WP_101431646.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 27167 28108 . + . ID=gene-CYJ01_RS09910;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=CYJ01_RS09910;old_locus_tag=CYJ01_09910 NZ_PJUR01000029.1 Protein Homology CDS 27167 28108 . + 0 ID=cds-WP_014613547.1;Parent=gene-CYJ01_RS09910;Dbxref=GenBank:WP_014613547.1;Name=WP_014613547.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CYJ01_RS09910;product=3'-5' exoribonuclease YhaM;protein_id=WP_014613547.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 28318 29274 . - . ID=gene-CYJ01_RS09915;Name=CYJ01_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09915;old_locus_tag=CYJ01_09915 NZ_PJUR01000029.1 Protein Homology CDS 28318 29274 . - 0 ID=cds-WP_014613548.1;Parent=gene-CYJ01_RS09915;Dbxref=GenBank:WP_014613548.1;Name=WP_014613548.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168017.1;locus_tag=CYJ01_RS09915;product=peptidylprolyl isomerase;protein_id=WP_014613548.1;transl_table=11 NZ_PJUR01000029.1 RefSeq pseudogene 29458 29634 . - . ID=gene-CYJ01_RS12300;Name=CYJ01_RS12300;end_range=29634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12300;partial=true;pseudo=true NZ_PJUR01000029.1 Protein Homology CDS 29458 29634 . - 0 ID=cds-CYJ01_RS12300;Parent=gene-CYJ01_RS12300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29634,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.7;locus_tag=CYJ01_RS12300;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 29955 30521 . - . ID=gene-CYJ01_RS09920;Name=CYJ01_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09920;old_locus_tag=CYJ01_09920 NZ_PJUR01000029.1 Protein Homology CDS 29955 30521 . - 0 ID=cds-WP_015729361.1;Parent=gene-CYJ01_RS09920;Dbxref=GenBank:WP_015729361.1;Name=WP_015729361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729361.1;locus_tag=CYJ01_RS09920;product=DUF3267 domain-containing protein;protein_id=WP_015729361.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 30570 31100 . - . ID=gene-CYJ01_RS09925;Name=CYJ01_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09925;old_locus_tag=CYJ01_09925 NZ_PJUR01000029.1 Protein Homology CDS 30570 31100 . - 0 ID=cds-WP_096548917.1;Parent=gene-CYJ01_RS09925;Dbxref=GenBank:WP_096548917.1;Name=WP_096548917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=CYJ01_RS09925;product=HTH-type transcriptional regulator Hpr;protein_id=WP_096548917.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 31202 31558 . - . ID=gene-CYJ01_RS09930;Name=CYJ01_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09930;old_locus_tag=CYJ01_09930 NZ_PJUR01000029.1 Protein Homology CDS 31202 31558 . - 0 ID=cds-WP_014613552.1;Parent=gene-CYJ01_RS09930;Dbxref=GenBank:WP_014613552.1;Name=WP_014613552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=CYJ01_RS09930;product=YtxH domain-containing protein;protein_id=WP_014613552.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 31636 32061 . - . ID=gene-CYJ01_RS09935;Name=CYJ01_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09935;old_locus_tag=CYJ01_09935 NZ_PJUR01000029.1 Protein Homology CDS 31636 32061 . - 0 ID=cds-WP_063279146.1;Parent=gene-CYJ01_RS09935;Dbxref=GenBank:WP_063279146.1;Name=WP_063279146.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=CYJ01_RS09935;product=HIT family protein;protein_id=WP_063279146.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 32197 32934 . + . ID=gene-CYJ01_RS09940;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09940;old_locus_tag=CYJ01_09940 NZ_PJUR01000029.1 Protein Homology CDS 32197 32934 . + 0 ID=cds-WP_014613554.1;Parent=gene-CYJ01_RS09940;Dbxref=GenBank:WP_014613554.1;Name=WP_014613554.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168023.1;locus_tag=CYJ01_RS09940;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_014613554.1;transl_table=11 NZ_PJUR01000029.1 RefSeq gene 32931 34145 . + . ID=gene-CYJ01_RS09945;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=CYJ01_RS09945;old_locus_tag=CYJ01_09945 NZ_PJUR01000029.1 Protein Homology CDS 32931 34145 . + 0 ID=cds-WP_014613555.1;Parent=gene-CYJ01_RS09945;Dbxref=GenBank:WP_014613555.1;Name=WP_014613555.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=CYJ01_RS09945;product=ABC transporter permease EcsB;protein_id=WP_014613555.1;transl_table=11 ##sequence-region NZ_PJUR01000003.1 1 122445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000003.1 RefSeq region 1 122445 . + . ID=NZ_PJUR01000003.1:1..122445;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000003.1 RefSeq gene 166 1131 . + . ID=gene-CYJ01_RS01650;Name=CYJ01_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01650;old_locus_tag=CYJ01_01650 NZ_PJUR01000003.1 Protein Homology CDS 166 1131 . + 0 ID=cds-WP_101457158.1;Parent=gene-CYJ01_RS01650;Dbxref=GenBank:WP_101457158.1;Name=WP_101457158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=CYJ01_RS01650;product=alpha/beta fold hydrolase;protein_id=WP_101457158.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 1161 1883 . + . ID=gene-CYJ01_RS01655;Name=CYJ01_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01655;old_locus_tag=CYJ01_01655 NZ_PJUR01000003.1 Protein Homology CDS 1161 1883 . + 0 ID=cds-WP_063284769.1;Parent=gene-CYJ01_RS01655;Dbxref=GenBank:WP_063284769.1;Name=WP_063284769.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729668.1;locus_tag=CYJ01_RS01655;product=helix-turn-helix domain-containing protein;protein_id=WP_063284769.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 2070 3992 . + . ID=gene-CYJ01_RS01660;Name=CYJ01_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01660;old_locus_tag=CYJ01_01660 NZ_PJUR01000003.1 Protein Homology CDS 2070 3992 . + 0 ID=cds-WP_101457159.1;Parent=gene-CYJ01_RS01660;Dbxref=GenBank:WP_101457159.1;Name=WP_101457159.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166501.1;locus_tag=CYJ01_RS01660;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_101457159.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 4129 5988 . + . ID=gene-CYJ01_RS01665;Name=spsA;gbkey=Gene;gene=spsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01665;old_locus_tag=CYJ01_01665 NZ_PJUR01000003.1 Protein Homology CDS 4129 5988 . + 0 ID=cds-WP_101457160.1;Parent=gene-CYJ01_RS01665;Dbxref=GenBank:WP_101457160.1;Name=WP_101457160.1;gbkey=CDS;gene=spsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612921.1;locus_tag=CYJ01_RS01665;product=LPXTG-anchored surface protein SpsA;protein_id=WP_101457160.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 6581 8656 . - . ID=gene-CYJ01_RS01670;Name=CYJ01_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01670;old_locus_tag=CYJ01_01670 NZ_PJUR01000003.1 Protein Homology CDS 6581 8656 . - 0 ID=cds-WP_101457161.1;Parent=gene-CYJ01_RS01670;Dbxref=GenBank:WP_101457161.1;Name=WP_101457161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729665.1;locus_tag=CYJ01_RS01670;product=amidase domain-containing protein;protein_id=WP_101457161.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 8985 11819 . + . ID=gene-CYJ01_RS01675;Name=CYJ01_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01675;old_locus_tag=CYJ01_01675 NZ_PJUR01000003.1 Protein Homology CDS 8985 11819 . + 0 ID=cds-WP_101457162.1;Parent=gene-CYJ01_RS01675;Dbxref=GenBank:WP_101457162.1;Name=WP_101457162.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167306.1;locus_tag=CYJ01_RS01675;product=YhgE/Pip domain-containing protein;protein_id=WP_101457162.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 12205 12834 . + . ID=gene-CYJ01_RS01680;Name=CYJ01_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01680;old_locus_tag=CYJ01_01680 NZ_PJUR01000003.1 Protein Homology CDS 12205 12834 . + 0 ID=cds-WP_065353999.1;Parent=gene-CYJ01_RS01680;Dbxref=GenBank:WP_065353999.1;Name=WP_065353999.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219449.1;locus_tag=CYJ01_RS01680;product=class I SAM-dependent methyltransferase;protein_id=WP_065353999.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 13021 13749 . + . ID=gene-CYJ01_RS01685;Name=CYJ01_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01685;old_locus_tag=CYJ01_01685 NZ_PJUR01000003.1 Protein Homology CDS 13021 13749 . + 0 ID=cds-WP_014612925.1;Parent=gene-CYJ01_RS01685;Dbxref=GenBank:WP_014612925.1;Name=WP_014612925.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612925.1;locus_tag=CYJ01_RS01685;product=epoxyqueuosine reductase QueH;protein_id=WP_014612925.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 13853 15349 . + . ID=gene-CYJ01_RS01690;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01690;old_locus_tag=CYJ01_01690 NZ_PJUR01000003.1 Protein Homology CDS 13853 15349 . + 0 ID=cds-WP_015729662.1;Parent=gene-CYJ01_RS01690;Dbxref=GenBank:WP_015729662.1;Name=WP_015729662.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=CYJ01_RS01690;product=nickel ABC transporter substrate-binding protein;protein_id=WP_015729662.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 15339 16325 . + . ID=gene-CYJ01_RS01695;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CYJ01_RS01695;old_locus_tag=CYJ01_01695 NZ_PJUR01000003.1 Protein Homology CDS 15339 16325 . + 0 ID=cds-WP_014612927.1;Parent=gene-CYJ01_RS01695;Dbxref=GenBank:WP_014612927.1;Name=WP_014612927.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167506.1;locus_tag=CYJ01_RS01695;product=nickel ABC transporter permease;protein_id=WP_014612927.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 16322 17146 . + . ID=gene-CYJ01_RS01700;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=CYJ01_RS01700;old_locus_tag=CYJ01_01700 NZ_PJUR01000003.1 Protein Homology CDS 16322 17146 . + 0 ID=cds-WP_101457163.1;Parent=gene-CYJ01_RS01700;Dbxref=GenBank:WP_101457163.1;Name=WP_101457163.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729661.1;locus_tag=CYJ01_RS01700;product=nickel transporter permease;protein_id=WP_101457163.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 17139 17915 . + . ID=gene-CYJ01_RS01705;Name=CYJ01_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01705;old_locus_tag=CYJ01_01705 NZ_PJUR01000003.1 Protein Homology CDS 17139 17915 . + 0 ID=cds-WP_070407772.1;Parent=gene-CYJ01_RS01705;Dbxref=GenBank:WP_070407772.1;Name=WP_070407772.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=CYJ01_RS01705;product=ATP-binding cassette domain-containing protein;protein_id=WP_070407772.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 17908 18597 . + . ID=gene-CYJ01_RS01710;Name=CYJ01_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01710;old_locus_tag=CYJ01_01710 NZ_PJUR01000003.1 Protein Homology CDS 17908 18597 . + 0 ID=cds-WP_014612930.1;Parent=gene-CYJ01_RS01710;Dbxref=GenBank:WP_014612930.1;Name=WP_014612930.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729659.1;locus_tag=CYJ01_RS01710;product=ATP-binding cassette domain-containing protein;protein_id=WP_014612930.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 19172 21346 . - . ID=gene-CYJ01_RS01715;Name=CYJ01_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01715;old_locus_tag=CYJ01_01715 NZ_PJUR01000003.1 Protein Homology CDS 19172 21346 . - 0 ID=cds-WP_101457164.1;Parent=gene-CYJ01_RS01715;Dbxref=GenBank:WP_101457164.1;Name=WP_101457164.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729658.1;locus_tag=CYJ01_RS01715;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_101457164.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 21575 24766 . - . ID=gene-CYJ01_RS01720;Name=CYJ01_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01720;old_locus_tag=CYJ01_01720 NZ_PJUR01000003.1 Protein Homology CDS 21575 24766 . - 0 ID=cds-WP_423830975.1;Parent=gene-CYJ01_RS01720;Dbxref=GenBank:WP_423830975.1;Name=WP_423830975.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729657.1;locus_tag=CYJ01_RS01720;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_423830975.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 24855 26267 . + . ID=gene-CYJ01_RS01725;Name=CYJ01_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01725;old_locus_tag=CYJ01_01725 NZ_PJUR01000003.1 Protein Homology CDS 24855 26267 . + 0 ID=cds-WP_101457166.1;Parent=gene-CYJ01_RS01725;Dbxref=GenBank:WP_101457166.1;Name=WP_101457166.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=CYJ01_RS01725;product=glycosyltransferase family 2 protein;protein_id=WP_101457166.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 27327 27989 . - . ID=gene-CYJ01_RS01730;Name=CYJ01_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01730;old_locus_tag=CYJ01_01730 NZ_PJUR01000003.1 Protein Homology CDS 27327 27989 . - 0 ID=cds-WP_014612939.1;Parent=gene-CYJ01_RS01730;Dbxref=GenBank:WP_014612939.1;Name=WP_014612939.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166323.1;locus_tag=CYJ01_RS01730;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014612939.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 28102 28965 . + . ID=gene-CYJ01_RS01735;Name=CYJ01_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01735;old_locus_tag=CYJ01_01735 NZ_PJUR01000003.1 Protein Homology CDS 28102 28965 . + 0 ID=cds-WP_101457167.1;Parent=gene-CYJ01_RS01735;Dbxref=GenBank:WP_101457167.1;Name=WP_101457167.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=CYJ01_RS01735;product=fructosamine kinase family protein;protein_id=WP_101457167.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 28952 29404 . + . ID=gene-CYJ01_RS01740;Name=CYJ01_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01740;old_locus_tag=CYJ01_01740 NZ_PJUR01000003.1 Protein Homology CDS 28952 29404 . + 0 ID=cds-WP_101457168.1;Parent=gene-CYJ01_RS01740;Dbxref=GenBank:WP_101457168.1;Name=WP_101457168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612941.1;locus_tag=CYJ01_RS01740;product=DUF1648 domain-containing protein;protein_id=WP_101457168.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 29463 30065 . - . ID=gene-CYJ01_RS01745;Name=CYJ01_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01745;old_locus_tag=CYJ01_01745 NZ_PJUR01000003.1 Protein Homology CDS 29463 30065 . - 0 ID=cds-WP_101457169.1;Parent=gene-CYJ01_RS01745;Dbxref=GenBank:WP_101457169.1;Name=WP_101457169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729653.1;locus_tag=CYJ01_RS01745;product=hypothetical protein;protein_id=WP_101457169.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 30243 30884 . + . ID=gene-CYJ01_RS01750;Name=CYJ01_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01750;old_locus_tag=CYJ01_01750 NZ_PJUR01000003.1 Protein Homology CDS 30243 30884 . + 0 ID=cds-WP_063284779.1;Parent=gene-CYJ01_RS01750;Dbxref=GenBank:WP_063284779.1;Name=WP_063284779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166327.1;locus_tag=CYJ01_RS01750;product=hypothetical protein;protein_id=WP_063284779.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 30992 32044 . + . ID=gene-CYJ01_RS01755;Name=CYJ01_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01755;old_locus_tag=CYJ01_01755 NZ_PJUR01000003.1 Protein Homology CDS 30992 32044 . + 0 ID=cds-WP_015729651.1;Parent=gene-CYJ01_RS01755;Dbxref=GenBank:WP_015729651.1;Name=WP_015729651.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729651.1;locus_tag=CYJ01_RS01755;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_015729651.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 32041 32736 . + . ID=gene-CYJ01_RS01760;Name=CYJ01_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01760;old_locus_tag=CYJ01_01760 NZ_PJUR01000003.1 Protein Homology CDS 32041 32736 . + 0 ID=cds-WP_014612945.1;Parent=gene-CYJ01_RS01760;Dbxref=GenBank:WP_014612945.1;Name=WP_014612945.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612945.1;locus_tag=CYJ01_RS01760;product=ABC transporter ATP-binding protein;protein_id=WP_014612945.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 32720 33895 . + . ID=gene-CYJ01_RS01765;Name=CYJ01_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01765;old_locus_tag=CYJ01_01765 NZ_PJUR01000003.1 Protein Homology CDS 32720 33895 . + 0 ID=cds-WP_063279093.1;Parent=gene-CYJ01_RS01765;Dbxref=GenBank:WP_063279093.1;Name=WP_063279093.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=CYJ01_RS01765;product=ABC transporter permease;protein_id=WP_063279093.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 34728 36815 . - . ID=gene-CYJ01_RS01770;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ01_RS01770;old_locus_tag=CYJ01_01770 NZ_PJUR01000003.1 Protein Homology CDS 34728 36815 . - 0 ID=cds-WP_015729649.1;Parent=gene-CYJ01_RS01770;Dbxref=GenBank:WP_015729649.1;Name=WP_015729649.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612947.1;locus_tag=CYJ01_RS01770;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_015729649.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 37882 39012 . - . ID=gene-CYJ01_RS01775;Name=CYJ01_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01775;old_locus_tag=CYJ01_01775 NZ_PJUR01000003.1 Protein Homology CDS 37882 39012 . - 0 ID=cds-WP_037542271.1;Parent=gene-CYJ01_RS01775;Dbxref=GenBank:WP_037542271.1;Name=WP_037542271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612982.1;locus_tag=CYJ01_RS01775;product=sugar diacid recognition domain-containing protein;protein_id=WP_037542271.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 39790 40779 . - . ID=gene-CYJ01_RS01780;Name=CYJ01_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01780;old_locus_tag=CYJ01_01780 NZ_PJUR01000003.1 Protein Homology CDS 39790 40779 . - 0 ID=cds-WP_037542272.1;Parent=gene-CYJ01_RS01780;Dbxref=GenBank:WP_037542272.1;Name=WP_037542272.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167214.1;locus_tag=CYJ01_RS01780;product=YeiH family protein;protein_id=WP_037542272.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 41013 42659 . + . ID=gene-CYJ01_RS01785;Name=CYJ01_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01785;old_locus_tag=CYJ01_01785 NZ_PJUR01000003.1 Protein Homology CDS 41013 42659 . + 0 ID=cds-WP_014612984.1;Parent=gene-CYJ01_RS01785;Dbxref=GenBank:WP_014612984.1;Name=WP_014612984.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166658.1;locus_tag=CYJ01_RS01785;product=alpha-keto acid decarboxylase family protein;protein_id=WP_014612984.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 43288 44691 . + . ID=gene-CYJ01_RS01790;Name=CYJ01_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01790;old_locus_tag=CYJ01_01790 NZ_PJUR01000003.1 Protein Homology CDS 43288 44691 . + 0 ID=cds-WP_014612985.1;Parent=gene-CYJ01_RS01790;Dbxref=GenBank:WP_014612985.1;Name=WP_014612985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=CYJ01_RS01790;product=anthranilate synthase component I;protein_id=WP_014612985.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 44688 45272 . + . ID=gene-CYJ01_RS01795;Name=CYJ01_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01795;old_locus_tag=CYJ01_01795 NZ_PJUR01000003.1 Protein Homology CDS 44688 45272 . + 0 ID=cds-WP_037542279.1;Parent=gene-CYJ01_RS01795;Dbxref=GenBank:WP_037542279.1;Name=WP_037542279.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=CYJ01_RS01795;product=anthranilate synthase component II;protein_id=WP_037542279.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 45256 46260 . + . ID=gene-CYJ01_RS01800;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CYJ01_RS01800;old_locus_tag=CYJ01_01800 NZ_PJUR01000003.1 Protein Homology CDS 45256 46260 . + 0 ID=cds-WP_014612987.1;Parent=gene-CYJ01_RS01800;Dbxref=GenBank:WP_014612987.1;Name=WP_014612987.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612987.1;locus_tag=CYJ01_RS01800;product=anthranilate phosphoribosyltransferase;protein_id=WP_014612987.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 46257 47036 . + . ID=gene-CYJ01_RS01805;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=CYJ01_RS01805;old_locus_tag=CYJ01_01805 NZ_PJUR01000003.1 Protein Homology CDS 46257 47036 . + 0 ID=cds-WP_101457170.1;Parent=gene-CYJ01_RS01805;Dbxref=GenBank:WP_101457170.1;Name=WP_101457170.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612988.1;locus_tag=CYJ01_RS01805;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_101457170.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 47038 47661 . + . ID=gene-CYJ01_RS01810;Name=CYJ01_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01810;old_locus_tag=CYJ01_01810 NZ_PJUR01000003.1 Protein Homology CDS 47038 47661 . + 0 ID=cds-WP_101457171.1;Parent=gene-CYJ01_RS01810;Dbxref=GenBank:WP_101457171.1;Name=WP_101457171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=CYJ01_RS01810;product=phosphoribosylanthranilate isomerase;protein_id=WP_101457171.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 47664 48869 . + . ID=gene-CYJ01_RS01815;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS01815;old_locus_tag=CYJ01_01815 NZ_PJUR01000003.1 Protein Homology CDS 47664 48869 . + 0 ID=cds-WP_015729625.1;Parent=gene-CYJ01_RS01815;Dbxref=GenBank:WP_015729625.1;Name=WP_015729625.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219476.1;locus_tag=CYJ01_RS01815;product=tryptophan synthase subunit beta;protein_id=WP_015729625.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 48872 49621 . + . ID=gene-CYJ01_RS01820;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01820;old_locus_tag=CYJ01_01820 NZ_PJUR01000003.1 Protein Homology CDS 48872 49621 . + 0 ID=cds-WP_101457172.1;Parent=gene-CYJ01_RS01820;Dbxref=GenBank:WP_101457172.1;Name=WP_101457172.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729624.1;locus_tag=CYJ01_RS01820;product=tryptophan synthase subunit alpha;protein_id=WP_101457172.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 49741 50451 . + . ID=gene-CYJ01_RS01825;Name=CYJ01_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01825;old_locus_tag=CYJ01_01825 NZ_PJUR01000003.1 Protein Homology CDS 49741 50451 . + 0 ID=cds-WP_014612992.1;Parent=gene-CYJ01_RS01825;Dbxref=GenBank:WP_014612992.1;Name=WP_014612992.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=CYJ01_RS01825;product=HAD family hydrolase;protein_id=WP_014612992.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 50909 51637 . + . ID=gene-CYJ01_RS01830;Name=CYJ01_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01830;old_locus_tag=CYJ01_01830 NZ_PJUR01000003.1 Protein Homology CDS 50909 51637 . + 0 ID=cds-WP_014612993.1;Parent=gene-CYJ01_RS01830;Dbxref=GenBank:WP_014612993.1;Name=WP_014612993.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165919.1;locus_tag=CYJ01_RS01830;product=S1 family peptidase;protein_id=WP_014612993.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 51928 52356 . - . ID=gene-CYJ01_RS01835;Name=CYJ01_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01835;old_locus_tag=CYJ01_01835 NZ_PJUR01000003.1 Protein Homology CDS 51928 52356 . - 0 ID=cds-WP_014612994.1;Parent=gene-CYJ01_RS01835;Dbxref=GenBank:WP_014612994.1;Name=WP_014612994.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=CYJ01_RS01835;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_014612994.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 52577 53998 . + . ID=gene-CYJ01_RS01840;Name=CYJ01_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01840;old_locus_tag=CYJ01_01840 NZ_PJUR01000003.1 Protein Homology CDS 52577 53998 . + 0 ID=cds-WP_015729622.1;Parent=gene-CYJ01_RS01840;Dbxref=GenBank:WP_015729622.1;Name=WP_015729622.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165921.1;locus_tag=CYJ01_RS01840;product=FAD-binding oxidoreductase;protein_id=WP_015729622.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 53988 55268 . + . ID=gene-CYJ01_RS01845;Name=CYJ01_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01845;old_locus_tag=CYJ01_01845 NZ_PJUR01000003.1 Protein Homology CDS 53988 55268 . + 0 ID=cds-WP_101431261.1;Parent=gene-CYJ01_RS01845;Dbxref=GenBank:WP_101431261.1;Name=WP_101431261.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612996.1;locus_tag=CYJ01_RS01845;product=(Fe-S)-binding protein;protein_id=WP_101431261.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 55424 57217 . + . ID=gene-CYJ01_RS01850;Name=CYJ01_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01850;old_locus_tag=CYJ01_01850 NZ_PJUR01000003.1 Protein Homology CDS 55424 57217 . + 0 ID=cds-WP_101457173.1;Parent=gene-CYJ01_RS01850;Dbxref=GenBank:WP_101457173.1;Name=WP_101457173.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165924.1;locus_tag=CYJ01_RS01850;product=ABC transporter ATP-binding protein;protein_id=WP_101457173.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 57198 58976 . + . ID=gene-CYJ01_RS01855;Name=CYJ01_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01855;old_locus_tag=CYJ01_01855 NZ_PJUR01000003.1 Protein Homology CDS 57198 58976 . + 0 ID=cds-WP_101457174.1;Parent=gene-CYJ01_RS01855;Dbxref=GenBank:WP_101457174.1;Name=WP_101457174.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612998.1;locus_tag=CYJ01_RS01855;product=ABC transporter ATP-binding protein;protein_id=WP_101457174.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 59948 60688 . - . ID=gene-CYJ01_RS01860;Name=CYJ01_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01860;old_locus_tag=CYJ01_01860 NZ_PJUR01000003.1 Protein Homology CDS 59948 60688 . - 0 ID=cds-WP_101457175.1;Parent=gene-CYJ01_RS01860;Dbxref=GenBank:WP_101457175.1;Name=WP_101457175.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166342.1;locus_tag=CYJ01_RS01860;product=MerR family transcriptional regulator;protein_id=WP_101457175.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 61237 61668 . - . ID=gene-CYJ01_RS01870;Name=CYJ01_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01870;old_locus_tag=CYJ01_01870 NZ_PJUR01000003.1 Protein Homology CDS 61237 61668 . - 0 ID=cds-WP_031253602.1;Parent=gene-CYJ01_RS01870;Dbxref=GenBank:WP_031253602.1;Name=WP_031253602.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=CYJ01_RS01870;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_031253602.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 62016 63410 . - . ID=gene-CYJ01_RS01875;Name=CYJ01_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01875;old_locus_tag=CYJ01_01875 NZ_PJUR01000003.1 Protein Homology CDS 62016 63410 . - 0 ID=cds-WP_101457176.1;Parent=gene-CYJ01_RS01875;Dbxref=GenBank:WP_101457176.1;Name=WP_101457176.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166345.1;locus_tag=CYJ01_RS01875;product=alanine/glycine:cation symporter family protein;protein_id=WP_101457176.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 64835 66790 . - . ID=gene-CYJ01_RS01880;Name=CYJ01_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01880;old_locus_tag=CYJ01_01880 NZ_PJUR01000003.1 Protein Homology CDS 64835 66790 . - 0 ID=cds-WP_037542294.1;Parent=gene-CYJ01_RS01880;Dbxref=GenBank:WP_037542294.1;Name=WP_037542294.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499540.1;locus_tag=CYJ01_RS01880;product=fructose-bisphosphatase class III;protein_id=WP_037542294.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 67306 68487 . + . ID=gene-CYJ01_RS01885;Name=CYJ01_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01885;old_locus_tag=CYJ01_01885 NZ_PJUR01000003.1 Protein Homology CDS 67306 68487 . + 0 ID=cds-WP_101431644.1;Parent=gene-CYJ01_RS01885;Dbxref=GenBank:WP_101431644.1;Name=WP_101431644.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166503.1;locus_tag=CYJ01_RS01885;product=MFS transporter;protein_id=WP_101431644.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 68728 69993 . + . ID=gene-CYJ01_RS01890;Name=CYJ01_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01890;old_locus_tag=CYJ01_01890 NZ_PJUR01000003.1 Protein Homology CDS 68728 69993 . + 0 ID=cds-WP_014613004.1;Parent=gene-CYJ01_RS01890;Dbxref=GenBank:WP_014613004.1;Name=WP_014613004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613004.1;locus_tag=CYJ01_RS01890;product=pyruvate MFS transporter;protein_id=WP_014613004.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 70379 70975 . + . ID=gene-CYJ01_RS01895;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01895;old_locus_tag=CYJ01_01895 NZ_PJUR01000003.1 Protein Homology CDS 70379 70975 . + 0 ID=cds-WP_065520356.1;Parent=gene-CYJ01_RS01895;Dbxref=GenBank:WP_065520356.1;Name=WP_065520356.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219480.1;locus_tag=CYJ01_RS01895;product=class A sortase SrtA;protein_id=WP_065520356.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 71146 72291 . + . ID=gene-CYJ01_RS01900;Name=CYJ01_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01900;old_locus_tag=CYJ01_01900 NZ_PJUR01000003.1 Protein Homology CDS 71146 72291 . + 0 ID=cds-WP_101431643.1;Parent=gene-CYJ01_RS01900;Dbxref=GenBank:WP_101431643.1;Name=WP_101431643.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169529.1;locus_tag=CYJ01_RS01900;product=glycerate kinase family protein;protein_id=WP_101431643.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 72296 72829 . + . ID=gene-CYJ01_RS01905;Name=CYJ01_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01905;old_locus_tag=CYJ01_01905 NZ_PJUR01000003.1 Protein Homology CDS 72296 72829 . + 0 ID=cds-WP_014613007.1;Parent=gene-CYJ01_RS01905;Dbxref=GenBank:WP_014613007.1;Name=WP_014613007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166507.1;locus_tag=CYJ01_RS01905;product=LURP-one-related family protein;protein_id=WP_014613007.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 72901 73575 . - . ID=gene-CYJ01_RS01910;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01910;old_locus_tag=CYJ01_01910 NZ_PJUR01000003.1 Protein Homology CDS 72901 73575 . - 0 ID=cds-WP_014613008.1;Parent=gene-CYJ01_RS01910;Dbxref=GenBank:WP_014613008.1;Name=WP_014613008.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166508.1;locus_tag=CYJ01_RS01910;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_014613008.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 74103 75182 . + . ID=gene-CYJ01_RS01915;Name=CYJ01_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01915;old_locus_tag=CYJ01_01915 NZ_PJUR01000003.1 Protein Homology CDS 74103 75182 . + 0 ID=cds-WP_015729615.1;Parent=gene-CYJ01_RS01915;Dbxref=GenBank:WP_015729615.1;Name=WP_015729615.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613009.1;locus_tag=CYJ01_RS01915;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_015729615.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 75503 76573 . + . ID=gene-CYJ01_RS01920;Name=CYJ01_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01920;old_locus_tag=CYJ01_01920 NZ_PJUR01000003.1 Protein Homology CDS 75503 76573 . + 0 ID=cds-WP_070407378.1;Parent=gene-CYJ01_RS01920;Dbxref=GenBank:WP_070407378.1;Name=WP_070407378.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219481.1;locus_tag=CYJ01_RS01920;product=PTS sugar transporter subunit IIC;protein_id=WP_070407378.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 76870 79119 . + . ID=gene-CYJ01_RS01925;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CYJ01_RS01925;old_locus_tag=CYJ01_01925 NZ_PJUR01000003.1 Protein Homology CDS 76870 79119 . + 0 ID=cds-WP_014613011.1;Parent=gene-CYJ01_RS01925;Dbxref=GenBank:WP_014613011.1;Name=WP_014613011.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169534.1;locus_tag=CYJ01_RS01925;product=formate C-acetyltransferase;protein_id=WP_014613011.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 79178 79939 . + . ID=gene-CYJ01_RS01930;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01930;old_locus_tag=CYJ01_01930 NZ_PJUR01000003.1 Protein Homology CDS 79178 79939 . + 0 ID=cds-WP_014613012.1;Parent=gene-CYJ01_RS01930;Dbxref=GenBank:WP_014613012.1;Name=WP_014613012.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166512.1;locus_tag=CYJ01_RS01930;product=pyruvate formate-lyase-activating protein;protein_id=WP_014613012.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 80542 81201 . + . ID=gene-CYJ01_RS01935;Name=CYJ01_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01935;old_locus_tag=CYJ01_01935 NZ_PJUR01000003.1 Protein Homology CDS 80542 81201 . + 0 ID=cds-WP_014613014.1;Parent=gene-CYJ01_RS01935;Dbxref=GenBank:WP_014613014.1;Name=WP_014613014.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169536.1;locus_tag=CYJ01_RS01935;product=SDR family oxidoreductase;protein_id=WP_014613014.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 81495 83219 . + . ID=gene-CYJ01_RS01940;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ01_RS01940;old_locus_tag=CYJ01_01940 NZ_PJUR01000003.1 Protein Homology CDS 81495 83219 . + 0 ID=cds-WP_037542303.1;Parent=gene-CYJ01_RS01940;Dbxref=GenBank:WP_037542303.1;Name=WP_037542303.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613015.1;locus_tag=CYJ01_RS01940;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_037542303.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 83347 84354 . + . ID=gene-CYJ01_RS01945;Name=CYJ01_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01945;old_locus_tag=CYJ01_01945 NZ_PJUR01000003.1 Protein Homology CDS 83347 84354 . + 0 ID=cds-WP_037544117.1;Parent=gene-CYJ01_RS01945;Dbxref=GenBank:WP_037544117.1;Name=WP_037544117.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613016.1;locus_tag=CYJ01_RS01945;product=ABC transporter ATP-binding protein;protein_id=WP_037544117.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 84351 85340 . + . ID=gene-CYJ01_RS01950;Name=CYJ01_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01950;old_locus_tag=CYJ01_01950 NZ_PJUR01000003.1 Protein Homology CDS 84351 85340 . + 0 ID=cds-WP_101457177.1;Parent=gene-CYJ01_RS01950;Dbxref=GenBank:WP_101457177.1;Name=WP_101457177.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613017.1;locus_tag=CYJ01_RS01950;product=ABC transporter ATP-binding protein;protein_id=WP_101457177.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 85337 86299 . + . ID=gene-CYJ01_RS01955;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ01_RS01955;old_locus_tag=CYJ01_01955 NZ_PJUR01000003.1 Protein Homology CDS 85337 86299 . + 0 ID=cds-WP_014613023.1;Parent=gene-CYJ01_RS01955;Dbxref=GenBank:WP_014613023.1;Name=WP_014613023.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ01_RS01955;product=oligopeptide ABC transporter permease;protein_id=WP_014613023.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 86311 87204 . + . ID=gene-CYJ01_RS01960;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ01_RS01960;old_locus_tag=CYJ01_01960 NZ_PJUR01000003.1 Protein Homology CDS 86311 87204 . + 0 ID=cds-WP_014613024.1;Parent=gene-CYJ01_RS01960;Dbxref=GenBank:WP_014613024.1;Name=WP_014613024.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613024.1;locus_tag=CYJ01_RS01960;product=oligopeptide ABC transporter permease;protein_id=WP_014613024.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 87522 87779 . + . ID=gene-CYJ01_RS01965;Name=CYJ01_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01965;old_locus_tag=CYJ01_01965 NZ_PJUR01000003.1 Protein Homology CDS 87522 87779 . + 0 ID=cds-WP_014613025.1;Parent=gene-CYJ01_RS01965;Dbxref=GenBank:WP_014613025.1;Name=WP_014613025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613025.1;locus_tag=CYJ01_RS01965;product=hypothetical protein;protein_id=WP_014613025.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 88165 89064 . - . ID=gene-CYJ01_RS01970;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ01_RS01970;old_locus_tag=CYJ01_01970 NZ_PJUR01000003.1 Protein Homology CDS 88165 89064 . - 0 ID=cds-WP_015729613.1;Parent=gene-CYJ01_RS01970;Dbxref=GenBank:WP_015729613.1;Name=WP_015729613.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=CYJ01_RS01970;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_015729613.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 89080 89757 . - . ID=gene-CYJ01_RS01975;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ01_RS01975;old_locus_tag=CYJ01_01975 NZ_PJUR01000003.1 Protein Homology CDS 89080 89757 . - 0 ID=cds-WP_020219491.1;Parent=gene-CYJ01_RS01975;Dbxref=GenBank:WP_020219491.1;Name=WP_020219491.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219491.1;locus_tag=CYJ01_RS01975;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_020219491.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 89772 90803 . - . ID=gene-CYJ01_RS01980;Name=CYJ01_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01980;old_locus_tag=CYJ01_01980 NZ_PJUR01000003.1 Protein Homology CDS 89772 90803 . - 0 ID=cds-WP_014613028.1;Parent=gene-CYJ01_RS01980;Dbxref=GenBank:WP_014613028.1;Name=WP_014613028.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=CYJ01_RS01980;product=PTS sugar transporter subunit IIC;protein_id=WP_014613028.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 91363 91542 . + . ID=gene-CYJ01_RS01985;Name=CYJ01_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01985;old_locus_tag=CYJ01_01985 NZ_PJUR01000003.1 Protein Homology CDS 91363 91542 . + 0 ID=cds-WP_014613030.1;Parent=gene-CYJ01_RS01985;Dbxref=GenBank:WP_014613030.1;Name=WP_014613030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613030.1;locus_tag=CYJ01_RS01985;product=hypothetical protein;protein_id=WP_014613030.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 91841 92662 . + . ID=gene-CYJ01_RS01990;Name=CYJ01_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01990;old_locus_tag=CYJ01_01990 NZ_PJUR01000003.1 Protein Homology CDS 91841 92662 . + 0 ID=cds-WP_101457178.1;Parent=gene-CYJ01_RS01990;Dbxref=GenBank:WP_101457178.1;Name=WP_101457178.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219492.1;locus_tag=CYJ01_RS01990;product=metallophosphoesterase;protein_id=WP_101457178.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 93442 94932 . + . ID=gene-CYJ01_RS01995;Name=CYJ01_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS01995;old_locus_tag=CYJ01_01995 NZ_PJUR01000003.1 Protein Homology CDS 93442 94932 . + 0 ID=cds-WP_101457179.1;Parent=gene-CYJ01_RS01995;Dbxref=GenBank:WP_101457179.1;Name=WP_101457179.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=CYJ01_RS01995;product=aldehyde dehydrogenase family protein;protein_id=WP_101457179.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 95529 95789 . - . ID=gene-CYJ01_RS02000;Name=CYJ01_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02000;old_locus_tag=CYJ01_02000 NZ_PJUR01000003.1 Protein Homology CDS 95529 95789 . - 0 ID=cds-WP_014613033.1;Parent=gene-CYJ01_RS02000;Dbxref=GenBank:WP_014613033.1;Name=WP_014613033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046291.3;locus_tag=CYJ01_RS02000;product=hypothetical protein;protein_id=WP_014613033.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 97108 97896 . - . ID=gene-CYJ01_RS02005;Name=CYJ01_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02005;old_locus_tag=CYJ01_02005 NZ_PJUR01000003.1 Protein Homology CDS 97108 97896 . - 0 ID=cds-WP_015729610.1;Parent=gene-CYJ01_RS02005;Dbxref=GenBank:WP_015729610.1;Name=WP_015729610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613034.1;locus_tag=CYJ01_RS02005;product=hypothetical protein;protein_id=WP_015729610.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 98005 98274 . - . ID=gene-CYJ01_RS02010;Name=CYJ01_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02010;old_locus_tag=CYJ01_02010 NZ_PJUR01000003.1 Protein Homology CDS 98005 98274 . - 0 ID=cds-WP_101431520.1;Parent=gene-CYJ01_RS02010;Dbxref=GenBank:WP_101431520.1;Name=WP_101431520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729609.1;locus_tag=CYJ01_RS02010;product=hypothetical protein;protein_id=WP_101431520.1;transl_table=11 NZ_PJUR01000003.1 RefSeq pseudogene 98421 99140 . - . ID=gene-CYJ01_RS02015;Name=CYJ01_RS02015;end_range=99140,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS02015;old_locus_tag=CYJ01_02015;partial=true;pseudo=true NZ_PJUR01000003.1 Protein Homology CDS 98421 99140 . - 0 ID=cds-CYJ01_RS02015;Parent=gene-CYJ01_RS02015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006270,GO:0003677,GO:0003916;end_range=99140,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489526.1;locus_tag=CYJ01_RS02015;partial=true;product=replication initiation factor domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 99200 100207 . + . ID=gene-CYJ01_RS02020;Name=CYJ01_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02020;old_locus_tag=CYJ01_02020 NZ_PJUR01000003.1 Protein Homology CDS 99200 100207 . + 0 ID=cds-WP_015729607.1;Parent=gene-CYJ01_RS02020;Dbxref=GenBank:WP_015729607.1;Name=WP_015729607.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729607.1;locus_tag=CYJ01_RS02020;product=PTS sugar transporter subunit IIC;protein_id=WP_015729607.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 100305 101837 . + . ID=gene-CYJ01_RS02025;Name=CYJ01_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02025;old_locus_tag=CYJ01_02025 NZ_PJUR01000003.1 Protein Homology CDS 100305 101837 . + 0 ID=cds-WP_096548332.1;Parent=gene-CYJ01_RS02025;Dbxref=GenBank:WP_096548332.1;Name=WP_096548332.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729606.1;locus_tag=CYJ01_RS02025;product=SLC13 family permease;protein_id=WP_096548332.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 102053 102877 . + . ID=gene-CYJ01_RS02030;Name=CYJ01_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02030;old_locus_tag=CYJ01_02030 NZ_PJUR01000003.1 Protein Homology CDS 102053 102877 . + 0 ID=cds-WP_101457181.1;Parent=gene-CYJ01_RS02030;Dbxref=GenBank:WP_101457181.1;Name=WP_101457181.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613039.1;locus_tag=CYJ01_RS02030;product=formate/nitrite transporter family protein;protein_id=WP_101457181.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 103102 103659 . + . ID=gene-CYJ01_RS02035;Name=CYJ01_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02035;old_locus_tag=CYJ01_02035 NZ_PJUR01000003.1 Protein Homology CDS 103102 103659 . + 0 ID=cds-WP_014613040.1;Parent=gene-CYJ01_RS02035;Dbxref=GenBank:WP_014613040.1;Name=WP_014613040.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219494.1;locus_tag=CYJ01_RS02035;product=GNAT family N-acetyltransferase;protein_id=WP_014613040.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 103828 104571 . + . ID=gene-CYJ01_RS02040;Name=CYJ01_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02040;old_locus_tag=CYJ01_02040 NZ_PJUR01000003.1 Protein Homology CDS 103828 104571 . + 0 ID=cds-WP_233275674.1;Parent=gene-CYJ01_RS02040;Dbxref=GenBank:WP_233275674.1;Name=WP_233275674.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613041.1;locus_tag=CYJ01_RS02040;product=sirohydrochlorin chelatase;protein_id=WP_233275674.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 104553 105014 . + . ID=gene-CYJ01_RS02045;Name=CYJ01_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02045;old_locus_tag=CYJ01_02045 NZ_PJUR01000003.1 Protein Homology CDS 104553 105014 . + 0 ID=cds-WP_015729604.1;Parent=gene-CYJ01_RS02045;Dbxref=GenBank:WP_015729604.1;Name=WP_015729604.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=CYJ01_RS02045;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_015729604.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 105007 107412 . + . ID=gene-CYJ01_RS02050;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02050;old_locus_tag=CYJ01_02050 NZ_PJUR01000003.1 Protein Homology CDS 105007 107412 . + 0 ID=cds-WP_101457182.1;Parent=gene-CYJ01_RS02050;Dbxref=GenBank:WP_101457182.1;Name=WP_101457182.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CYJ01_RS02050;product=nitrite reductase large subunit NirB;protein_id=WP_101457182.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 107417 107731 . + . ID=gene-CYJ01_RS02055;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02055;old_locus_tag=CYJ01_02055 NZ_PJUR01000003.1 Protein Homology CDS 107417 107731 . + 0 ID=cds-WP_014613044.1;Parent=gene-CYJ01_RS02055;Dbxref=GenBank:WP_014613044.1;Name=WP_014613044.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=CYJ01_RS02055;product=nitrite reductase small subunit NirD;protein_id=WP_014613044.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 107719 108666 . + . ID=gene-CYJ01_RS02060;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02060;old_locus_tag=CYJ01_02060 NZ_PJUR01000003.1 Protein Homology CDS 107719 108666 . + 0 ID=cds-WP_037542319.1;Parent=gene-CYJ01_RS02060;Dbxref=GenBank:WP_037542319.1;Name=WP_037542319.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613045.1;locus_tag=CYJ01_RS02060;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037542319.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 109608 111950 . + . ID=gene-CYJ01_RS02065;Name=CYJ01_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02065;old_locus_tag=CYJ01_02065 NZ_PJUR01000003.1 Protein Homology CDS 109608 111950 . + 0 ID=cds-WP_101457183.1;Parent=gene-CYJ01_RS02065;Dbxref=GenBank:WP_101457183.1;Name=WP_101457183.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=CYJ01_RS02065;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_101457183.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 112160 112666 . - . ID=gene-CYJ01_RS02070;Name=CYJ01_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02070;old_locus_tag=CYJ01_02070 NZ_PJUR01000003.1 GeneMarkS-2+ CDS 112160 112666 . - 0 ID=cds-WP_015729600.1;Parent=gene-CYJ01_RS02070;Dbxref=GenBank:WP_015729600.1;Name=WP_015729600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS02070;product=hypothetical protein;protein_id=WP_015729600.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 113416 117087 . + . ID=gene-CYJ01_RS02075;Name=CYJ01_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02075;old_locus_tag=CYJ01_02075 NZ_PJUR01000003.1 Protein Homology CDS 113416 117087 . + 0 ID=cds-WP_014613053.1;Parent=gene-CYJ01_RS02075;Dbxref=GenBank:WP_014613053.1;Name=WP_014613053.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CYJ01_RS02075;product=nitrate reductase subunit alpha;protein_id=WP_014613053.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 117077 118633 . + . ID=gene-CYJ01_RS02080;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CYJ01_RS02080;old_locus_tag=CYJ01_02080 NZ_PJUR01000003.1 Protein Homology CDS 117077 118633 . + 0 ID=cds-WP_101457184.1;Parent=gene-CYJ01_RS02080;Dbxref=GenBank:WP_101457184.1;Name=WP_101457184.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=CYJ01_RS02080;product=nitrate reductase subunit beta;protein_id=WP_101457184.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 118626 119201 . + . ID=gene-CYJ01_RS02085;Name=CYJ01_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02085;old_locus_tag=CYJ01_02085 NZ_PJUR01000003.1 Protein Homology CDS 118626 119201 . + 0 ID=cds-WP_014613055.1;Parent=gene-CYJ01_RS02085;Dbxref=GenBank:WP_014613055.1;Name=WP_014613055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=CYJ01_RS02085;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014613055.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 119194 119871 . + . ID=gene-CYJ01_RS02090;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CYJ01_RS02090;old_locus_tag=CYJ01_02090 NZ_PJUR01000003.1 Protein Homology CDS 119194 119871 . + 0 ID=cds-WP_014613056.1;Parent=gene-CYJ01_RS02090;Dbxref=GenBank:WP_014613056.1;Name=WP_014613056.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=CYJ01_RS02090;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014613056.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 119887 120348 . + . ID=gene-CYJ01_RS02095;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02095;old_locus_tag=CYJ01_02095 NZ_PJUR01000003.1 Protein Homology CDS 119887 120348 . + 0 ID=cds-WP_014613057.1;Parent=gene-CYJ01_RS02095;Dbxref=GenBank:WP_014613057.1;Name=WP_014613057.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613057.1;locus_tag=CYJ01_RS02095;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_014613057.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 120348 121382 . + . ID=gene-CYJ01_RS02100;Name=CYJ01_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02100;old_locus_tag=CYJ01_02100 NZ_PJUR01000003.1 Protein Homology CDS 120348 121382 . + 0 ID=cds-WP_014613058.1;Parent=gene-CYJ01_RS02100;Dbxref=GenBank:WP_014613058.1;Name=WP_014613058.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613058.1;locus_tag=CYJ01_RS02100;product=sensor histidine kinase;protein_id=WP_014613058.1;transl_table=11 NZ_PJUR01000003.1 RefSeq gene 121401 122051 . + . ID=gene-CYJ01_RS02105;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02105;old_locus_tag=CYJ01_02105 NZ_PJUR01000003.1 Protein Homology CDS 121401 122051 . + 0 ID=cds-WP_014613059.1;Parent=gene-CYJ01_RS02105;Dbxref=GenBank:WP_014613059.1;Name=WP_014613059.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=CYJ01_RS02105;product=nitrate respiration regulation response regulator NreC;protein_id=WP_014613059.1;transl_table=11 ##sequence-region NZ_PJUR01000030.1 1 30541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000030.1 RefSeq region 1 30541 . + . ID=NZ_PJUR01000030.1:1..30541;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000030.1 RefSeq gene 1 380 . + . ID=gene-CYJ01_RS09950;Name=CYJ01_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09950;old_locus_tag=CYJ01_09950;partial=true;start_range=.,1 NZ_PJUR01000030.1 Protein Homology CDS 1 380 . + 2 ID=cds-WP_133121617.1;Parent=gene-CYJ01_RS09950;Dbxref=GenBank:WP_133121617.1;Name=WP_133121617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012500.7;locus_tag=CYJ01_RS09950;partial=true;product=type III PLP-dependent enzyme domain-containing protein;protein_id=WP_133121617.1;start_range=.,1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 361 1704 . + . ID=gene-CYJ01_RS09955;Name=CYJ01_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09955;old_locus_tag=CYJ01_09955 NZ_PJUR01000030.1 GeneMarkS-2+ CDS 361 1704 . + 0 ID=cds-WP_037543323.1;Parent=gene-CYJ01_RS09955;Dbxref=GenBank:WP_037543323.1;Name=WP_037543323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS09955;product=alkaline phosphatase family protein;protein_id=WP_037543323.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 1701 2939 . + . ID=gene-CYJ01_RS09960;Name=CYJ01_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09960;old_locus_tag=CYJ01_09960 NZ_PJUR01000030.1 Protein Homology CDS 1701 2939 . + 0 ID=cds-WP_037543320.1;Parent=gene-CYJ01_RS09960;Dbxref=GenBank:WP_037543320.1;Name=WP_037543320.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ01_RS09960;product=MFS transporter;protein_id=WP_037543320.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 2936 3883 . + . ID=gene-CYJ01_RS09965;Name=CYJ01_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09965;old_locus_tag=CYJ01_09965 NZ_PJUR01000030.1 Protein Homology CDS 2936 3883 . + 0 ID=cds-WP_037543317.1;Parent=gene-CYJ01_RS09965;Dbxref=GenBank:WP_037543317.1;Name=WP_037543317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025114.7;locus_tag=CYJ01_RS09965;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037543317.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 3933 4076 . + . ID=gene-CYJ01_RS12015;Name=CYJ01_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12015 NZ_PJUR01000030.1 GeneMarkS-2+ CDS 3933 4076 . + 0 ID=cds-WP_157929437.1;Parent=gene-CYJ01_RS12015;Dbxref=GenBank:WP_157929437.1;Name=WP_157929437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12015;product=hypothetical protein;protein_id=WP_157929437.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 4530 6209 . - . ID=gene-CYJ01_RS09970;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09970;old_locus_tag=CYJ01_09970 NZ_PJUR01000030.1 Protein Homology CDS 4530 6209 . - 0 ID=cds-WP_014614255.1;Parent=gene-CYJ01_RS09970;Dbxref=GenBank:WP_014614255.1;Name=WP_014614255.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493055.1;locus_tag=CYJ01_RS09970;product=ribonuclease J1;protein_id=WP_014614255.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 6209 6424 . - . ID=gene-CYJ01_RS09975;Name=CYJ01_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09975;old_locus_tag=CYJ01_09975 NZ_PJUR01000030.1 Protein Homology CDS 6209 6424 . - 0 ID=cds-WP_014614254.1;Parent=gene-CYJ01_RS09975;Dbxref=GenBank:WP_014614254.1;Name=WP_014614254.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CYJ01_RS09975;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_014614254.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 6763 7035 . + . ID=gene-CYJ01_RS09980;Name=CYJ01_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09980;old_locus_tag=CYJ01_09980 NZ_PJUR01000030.1 Protein Homology CDS 6763 7035 . + 0 ID=cds-WP_096548552.1;Parent=gene-CYJ01_RS09980;Dbxref=GenBank:WP_096548552.1;Name=WP_096548552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=CYJ01_RS09980;product=hypothetical protein;protein_id=WP_096548552.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 7649 8200 . - . ID=gene-CYJ01_RS09985;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CYJ01_RS09985;old_locus_tag=CYJ01_09985 NZ_PJUR01000030.1 Protein Homology CDS 7649 8200 . - 0 ID=cds-WP_014614251.1;Parent=gene-CYJ01_RS09985;Dbxref=GenBank:WP_014614251.1;Name=WP_014614251.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=CYJ01_RS09985;product=peptide deformylase;protein_id=WP_014614251.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 8445 9077 . + . ID=gene-CYJ01_RS09990;Name=CYJ01_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS09990;old_locus_tag=CYJ01_09990 NZ_PJUR01000030.1 Protein Homology CDS 8445 9077 . + 0 ID=cds-WP_015728956.1;Parent=gene-CYJ01_RS09990;Dbxref=GenBank:WP_015728956.1;Name=WP_015728956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=CYJ01_RS09990;product=YkyA family protein;protein_id=WP_015728956.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 9241 10353 . + . ID=gene-CYJ01_RS09995;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CYJ01_RS09995;old_locus_tag=CYJ01_09995 NZ_PJUR01000030.1 Protein Homology CDS 9241 10353 . + 0 ID=cds-WP_014614249.1;Parent=gene-CYJ01_RS09995;Dbxref=GenBank:WP_014614249.1;Name=WP_014614249.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CYJ01_RS09995;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_014614249.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 10357 11334 . + . ID=gene-CYJ01_RS10000;Name=CYJ01_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10000;old_locus_tag=CYJ01_10000 NZ_PJUR01000030.1 Protein Homology CDS 10357 11334 . + 0 ID=cds-WP_014614248.1;Parent=gene-CYJ01_RS10000;Dbxref=GenBank:WP_014614248.1;Name=WP_014614248.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CYJ01_RS10000;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014614248.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 11490 12791 . + . ID=gene-CYJ01_RS10005;Name=CYJ01_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10005;old_locus_tag=CYJ01_10005 NZ_PJUR01000030.1 Protein Homology CDS 11490 12791 . + 0 ID=cds-WP_014614247.1;Parent=gene-CYJ01_RS10005;Dbxref=GenBank:WP_014614247.1;Name=WP_014614247.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CYJ01_RS10005;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_014614247.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 12795 14201 . + . ID=gene-CYJ01_RS10010;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10010;old_locus_tag=CYJ01_10010 NZ_PJUR01000030.1 Protein Homology CDS 12795 14201 . + 0 ID=cds-WP_014614246.1;Parent=gene-CYJ01_RS10010;Dbxref=GenBank:WP_014614246.1;Name=WP_014614246.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CYJ01_RS10010;product=dihydrolipoyl dehydrogenase;protein_id=WP_014614246.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 15011 15283 . + . ID=gene-CYJ01_RS10015;Name=CYJ01_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10015;old_locus_tag=CYJ01_10015 NZ_PJUR01000030.1 Protein Homology CDS 15011 15283 . + 0 ID=cds-WP_014614245.1;Parent=gene-CYJ01_RS10015;Dbxref=GenBank:WP_014614245.1;Name=WP_014614245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=CYJ01_RS10015;product=UPF0223 family protein;protein_id=WP_014614245.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 15386 15925 . + . ID=gene-CYJ01_RS10020;Name=CYJ01_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10020;old_locus_tag=CYJ01_10020 NZ_PJUR01000030.1 Protein Homology CDS 15386 15925 . + 0 ID=cds-WP_015728957.1;Parent=gene-CYJ01_RS10020;Dbxref=GenBank:WP_015728957.1;Name=WP_015728957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=CYJ01_RS10020;product=helix-turn-helix domain-containing protein;protein_id=WP_015728957.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 15940 17040 . + . ID=gene-CYJ01_RS10025;Name=CYJ01_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10025;old_locus_tag=CYJ01_10025 NZ_PJUR01000030.1 Protein Homology CDS 15940 17040 . + 0 ID=cds-WP_101457509.1;Parent=gene-CYJ01_RS10025;Dbxref=GenBank:WP_101457509.1;Name=WP_101457509.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=CYJ01_RS10025;product=ABC transporter ATP-binding protein;protein_id=WP_101457509.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 17027 17833 . + . ID=gene-CYJ01_RS10030;Name=CYJ01_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10030;old_locus_tag=CYJ01_10030 NZ_PJUR01000030.1 Protein Homology CDS 17027 17833 . + 0 ID=cds-WP_101457510.1;Parent=gene-CYJ01_RS10030;Dbxref=GenBank:WP_101457510.1;Name=WP_101457510.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=CYJ01_RS10030;product=ABC transporter permease;protein_id=WP_101457510.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 17830 18642 . + . ID=gene-CYJ01_RS10035;Name=CYJ01_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10035;old_locus_tag=CYJ01_10035 NZ_PJUR01000030.1 Protein Homology CDS 17830 18642 . + 0 ID=cds-WP_014614241.1;Parent=gene-CYJ01_RS10035;Dbxref=GenBank:WP_014614241.1;Name=WP_014614241.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=CYJ01_RS10035;product=ABC transporter permease;protein_id=WP_014614241.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 18639 19712 . + . ID=gene-CYJ01_RS10040;Name=CYJ01_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10040;old_locus_tag=CYJ01_10040 NZ_PJUR01000030.1 Protein Homology CDS 18639 19712 . + 0 ID=cds-WP_101457511.1;Parent=gene-CYJ01_RS10040;Dbxref=GenBank:WP_101457511.1;Name=WP_101457511.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=CYJ01_RS10040;product=ABC transporter substrate-binding protein;protein_id=WP_101457511.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 19784 20806 . + . ID=gene-CYJ01_RS10045;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10045;old_locus_tag=CYJ01_10045 NZ_PJUR01000030.1 Protein Homology CDS 19784 20806 . + 0 ID=cds-WP_101457512.1;Parent=gene-CYJ01_RS10045;Dbxref=GenBank:WP_101457512.1;Name=WP_101457512.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=CYJ01_RS10045;product=lipoteichoic acid stability factor AuxB;protein_id=WP_101457512.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 21034 21723 . + . ID=gene-CYJ01_RS10050;Name=CYJ01_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10050;old_locus_tag=CYJ01_10050 NZ_PJUR01000030.1 Protein Homology CDS 21034 21723 . + 0 ID=cds-WP_101457513.1;Parent=gene-CYJ01_RS10050;Dbxref=GenBank:WP_101457513.1;Name=WP_101457513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220275.1;locus_tag=CYJ01_RS10050;product=DUF4064 domain-containing protein;protein_id=WP_101457513.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 22408 23019 . - . ID=gene-CYJ01_RS10055;Name=CYJ01_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10055;old_locus_tag=CYJ01_10055 NZ_PJUR01000030.1 Protein Homology CDS 22408 23019 . - 0 ID=cds-WP_014614237.1;Parent=gene-CYJ01_RS10055;Dbxref=GenBank:WP_014614237.1;Name=WP_014614237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=CYJ01_RS10055;product=YktB family protein;protein_id=WP_014614237.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 23137 23955 . + . ID=gene-CYJ01_RS10060;Name=CYJ01_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10060;old_locus_tag=CYJ01_10060 NZ_PJUR01000030.1 Protein Homology CDS 23137 23955 . + 0 ID=cds-WP_101457514.1;Parent=gene-CYJ01_RS10060;Dbxref=GenBank:WP_101457514.1;Name=WP_101457514.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614236.1;locus_tag=CYJ01_RS10060;product=inositol monophosphatase family protein;protein_id=WP_101457514.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 24183 24374 . - . ID=gene-CYJ01_RS10065;Name=CYJ01_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10065;old_locus_tag=CYJ01_10065 NZ_PJUR01000030.1 Protein Homology CDS 24183 24374 . - 0 ID=cds-WP_225549974.1;Parent=gene-CYJ01_RS10065;Dbxref=GenBank:WP_225549974.1;Name=WP_225549974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446184.1;locus_tag=CYJ01_RS10065;product=DUF5325 family protein;protein_id=WP_225549974.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 24465 26315 . + . ID=gene-CYJ01_RS10070;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10070;old_locus_tag=CYJ01_10070 NZ_PJUR01000030.1 Protein Homology CDS 24465 26315 . + 0 ID=cds-WP_014614234.1;Parent=gene-CYJ01_RS10070;Dbxref=GenBank:WP_014614234.1;Name=WP_014614234.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614234.1;locus_tag=CYJ01_RS10070;product=translational GTPase TypA;protein_id=WP_014614234.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 26744 27871 . + . ID=gene-CYJ01_RS10075;Name=CYJ01_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10075;old_locus_tag=CYJ01_10075 NZ_PJUR01000030.1 Protein Homology CDS 26744 27871 . + 0 ID=cds-WP_101457515.1;Parent=gene-CYJ01_RS10075;Dbxref=GenBank:WP_101457515.1;Name=WP_101457515.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614233.1;locus_tag=CYJ01_RS10075;product=NADH-dependent flavin oxidoreductase;protein_id=WP_101457515.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 27995 28198 . - . ID=gene-CYJ01_RS10080;Name=CYJ01_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10080;old_locus_tag=CYJ01_10080 NZ_PJUR01000030.1 Protein Homology CDS 27995 28198 . - 0 ID=cds-WP_014614232.1;Parent=gene-CYJ01_RS10080;Dbxref=GenBank:WP_014614232.1;Name=WP_014614232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450673.1;locus_tag=CYJ01_RS10080;product=DUF2197 domain-containing protein;protein_id=WP_014614232.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 28199 28681 . - . ID=gene-CYJ01_RS10085;Name=CYJ01_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10085;old_locus_tag=CYJ01_10085 NZ_PJUR01000030.1 Protein Homology CDS 28199 28681 . - 0 ID=cds-WP_014614231.1;Parent=gene-CYJ01_RS10085;Dbxref=GenBank:WP_014614231.1;Name=WP_014614231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168169.1;locus_tag=CYJ01_RS10085;product=hypothetical protein;protein_id=WP_014614231.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 28818 29093 . + . ID=gene-CYJ01_RS10090;Name=CYJ01_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10090;old_locus_tag=CYJ01_10090 NZ_PJUR01000030.1 Protein Homology CDS 28818 29093 . + 0 ID=cds-WP_014614230.1;Parent=gene-CYJ01_RS10090;Dbxref=GenBank:WP_014614230.1;Name=WP_014614230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499608.1;locus_tag=CYJ01_RS10090;product=Fpa/YlaN family protein;protein_id=WP_014614230.1;transl_table=11 NZ_PJUR01000030.1 RefSeq gene 29164 30396 . + . ID=gene-CYJ01_RS10095;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CYJ01_RS10095;old_locus_tag=CYJ01_10095 NZ_PJUR01000030.1 Protein Homology CDS 29164 30396 . + 0 ID=cds-WP_014614229.1;Parent=gene-CYJ01_RS10095;Dbxref=GenBank:WP_014614229.1;Name=WP_014614229.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168168.1;locus_tag=CYJ01_RS10095;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_014614229.1;transl_table=11 ##sequence-region NZ_PJUR01000031.1 1 20047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000031.1 RefSeq region 1 20047 . + . ID=NZ_PJUR01000031.1:1..20047;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000031.1 RefSeq gene 618 1574 . - . ID=gene-CYJ01_RS10105;Name=CYJ01_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10105;old_locus_tag=CYJ01_10105 NZ_PJUR01000031.1 Protein Homology CDS 618 1574 . - 0 ID=cds-WP_157929458.1;Parent=gene-CYJ01_RS10105;Dbxref=GenBank:WP_157929458.1;Name=WP_157929458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012879.7;locus_tag=CYJ01_RS10105;product=insulinase family protein;protein_id=WP_157929458.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 1577 2674 . - . ID=gene-CYJ01_RS10110;Name=CYJ01_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10110;old_locus_tag=CYJ01_10110 NZ_PJUR01000031.1 GeneMarkS-2+ CDS 1577 2674 . - 0 ID=cds-WP_063284955.1;Parent=gene-CYJ01_RS10110;Dbxref=GenBank:WP_063284955.1;Name=WP_063284955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS10110;product=insulinase family protein;protein_id=WP_063284955.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 2661 3452 . - . ID=gene-CYJ01_RS11970;Name=CYJ01_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11970 NZ_PJUR01000031.1 GeneMarkS-2+ CDS 2661 3452 . - 0 ID=cds-WP_129821147.1;Parent=gene-CYJ01_RS11970;Dbxref=GenBank:WP_129821147.1;Name=WP_129821147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11970;product=hypothetical protein;protein_id=WP_129821147.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 3922 4620 . - . ID=gene-CYJ01_RS10120;Name=CYJ01_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10120;old_locus_tag=CYJ01_10120 NZ_PJUR01000031.1 Protein Homology CDS 3922 4620 . - 0 ID=cds-WP_015728576.1;Parent=gene-CYJ01_RS10120;Dbxref=GenBank:WP_015728576.1;Name=WP_015728576.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ01_RS10120;product=ATP-binding cassette domain-containing protein;protein_id=WP_015728576.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 4785 5318 . - . ID=gene-CYJ01_RS12305;Name=CYJ01_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12305 NZ_PJUR01000031.1 Protein Homology CDS 4785 5318 . - 0 ID=cds-WP_015728577.1;Parent=gene-CYJ01_RS12305;Dbxref=GenBank:WP_015728577.1;Name=WP_015728577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=CYJ01_RS12305;product=SPASM domain-containing protein;protein_id=WP_015728577.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 5348 5764 . - . ID=gene-CYJ01_RS12310;Name=CYJ01_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12310 NZ_PJUR01000031.1 Protein Homology CDS 5348 5764 . - 0 ID=cds-WP_241900538.1;Parent=gene-CYJ01_RS12310;Dbxref=GenBank:WP_241900538.1;Name=WP_241900538.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF015983.7;locus_tag=CYJ01_RS12310;product=radical SAM protein;protein_id=WP_241900538.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 5805 6119 . - . ID=gene-CYJ01_RS12315;Name=CYJ01_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12315 NZ_PJUR01000031.1 GeneMarkS-2+ CDS 5805 6119 . - 0 ID=cds-WP_241900539.1;Parent=gene-CYJ01_RS12315;Dbxref=GenBank:WP_241900539.1;Name=WP_241900539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12315;product=hypothetical protein;protein_id=WP_241900539.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 6197 6328 . - . ID=gene-CYJ01_RS10130;Name=CYJ01_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10130;old_locus_tag=CYJ01_10130 NZ_PJUR01000031.1 Protein Homology CDS 6197 6328 . - 0 ID=cds-WP_037544023.1;Parent=gene-CYJ01_RS10130;Dbxref=GenBank:WP_037544023.1;Name=WP_037544023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361779.1;locus_tag=CYJ01_RS10130;product=subtilosin A family bacteriocin;protein_id=WP_037544023.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 6454 7092 . + . ID=gene-CYJ01_RS10135;Name=CYJ01_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10135;old_locus_tag=CYJ01_10135 NZ_PJUR01000031.1 Protein Homology CDS 6454 7092 . + 0 ID=cds-WP_015728579.1;Parent=gene-CYJ01_RS10135;Dbxref=GenBank:WP_015728579.1;Name=WP_015728579.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=CYJ01_RS10135;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015728579.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 7550 8149 . + . ID=gene-CYJ01_RS10140;Name=CYJ01_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10140;old_locus_tag=CYJ01_10140 NZ_PJUR01000031.1 Protein Homology CDS 7550 8149 . + 0 ID=cds-WP_015728580.1;Parent=gene-CYJ01_RS10140;Dbxref=GenBank:WP_015728580.1;Name=WP_015728580.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.7;locus_tag=CYJ01_RS10140;product=transposase;protein_id=WP_015728580.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 8153 8473 . + . ID=gene-CYJ01_RS10145;Name=CYJ01_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10145;old_locus_tag=CYJ01_10145 NZ_PJUR01000031.1 Protein Homology CDS 8153 8473 . + 0 ID=cds-WP_070407722.1;Parent=gene-CYJ01_RS10145;Dbxref=GenBank:WP_070407722.1;Name=WP_070407722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025126.7;locus_tag=CYJ01_RS10145;product=transposase;protein_id=WP_070407722.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 8540 10801 . - . ID=gene-CYJ01_RS10150;Name=CYJ01_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10150;old_locus_tag=CYJ01_10150 NZ_PJUR01000031.1 Protein Homology CDS 8540 10801 . - 0 ID=cds-WP_063284951.1;Parent=gene-CYJ01_RS10150;Dbxref=GenBank:WP_063284951.1;Name=WP_063284951.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166373.1;locus_tag=CYJ01_RS10150;product=ATP-binding cassette domain-containing protein;protein_id=WP_063284951.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 10850 11623 . - . ID=gene-CYJ01_RS10155;Name=CYJ01_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10155;old_locus_tag=CYJ01_10155 NZ_PJUR01000031.1 Protein Homology CDS 10850 11623 . - 0 ID=cds-WP_014614837.1;Parent=gene-CYJ01_RS10155;Dbxref=GenBank:WP_014614837.1;Name=WP_014614837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=CYJ01_RS10155;product=YibE/F family protein;protein_id=WP_014614837.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 11620 12729 . - . ID=gene-CYJ01_RS10160;Name=CYJ01_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10160;old_locus_tag=CYJ01_10160 NZ_PJUR01000031.1 Protein Homology CDS 11620 12729 . - 0 ID=cds-WP_063284949.1;Parent=gene-CYJ01_RS10160;Dbxref=GenBank:WP_063284949.1;Name=WP_063284949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614836.1;locus_tag=CYJ01_RS10160;product=YibE/F family protein;protein_id=WP_063284949.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 12742 13620 . - . ID=gene-CYJ01_RS10165;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10165;old_locus_tag=CYJ01_10165 NZ_PJUR01000031.1 Protein Homology CDS 12742 13620 . - 0 ID=cds-WP_020220086.1;Parent=gene-CYJ01_RS10165;Dbxref=GenBank:WP_020220086.1;Name=WP_020220086.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=CYJ01_RS10165;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_020220086.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 13743 18248 . + . ID=gene-CYJ01_RS10170;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10170;old_locus_tag=CYJ01_10170 NZ_PJUR01000031.1 Protein Homology CDS 13743 18248 . + 0 ID=cds-WP_101457517.1;Parent=gene-CYJ01_RS10170;Dbxref=GenBank:WP_101457517.1;Name=WP_101457517.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=CYJ01_RS10170;product=glutamate synthase large subunit;protein_id=WP_101457517.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 18261 19718 . + . ID=gene-CYJ01_RS10175;Name=CYJ01_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10175;old_locus_tag=CYJ01_10175 NZ_PJUR01000031.1 Protein Homology CDS 18261 19718 . + 0 ID=cds-WP_101457518.1;Parent=gene-CYJ01_RS10175;Dbxref=GenBank:WP_101457518.1;Name=WP_101457518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503578.1;locus_tag=CYJ01_RS10175;product=glutamate synthase subunit beta;protein_id=WP_101457518.1;transl_table=11 NZ_PJUR01000031.1 RefSeq gene 19785 19877 . + . ID=gene-CYJ01_RS10180;Name=CYJ01_RS10180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10180;old_locus_tag=CYJ01_10180 NZ_PJUR01000031.1 tRNAscan-SE tRNA 19785 19877 . + . ID=rna-CYJ01_RS10180;Parent=gene-CYJ01_RS10180;anticodon=(pos:19821..19823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10180;product=tRNA-Ser NZ_PJUR01000031.1 tRNAscan-SE exon 19785 19877 . + . ID=exon-CYJ01_RS10180-1;Parent=rna-CYJ01_RS10180;anticodon=(pos:19821..19823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10180;product=tRNA-Ser NZ_PJUR01000031.1 RefSeq gene 19895 19968 . + . ID=gene-CYJ01_RS10185;Name=CYJ01_RS10185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10185;old_locus_tag=CYJ01_10185 NZ_PJUR01000031.1 tRNAscan-SE tRNA 19895 19968 . + . ID=rna-CYJ01_RS10185;Parent=gene-CYJ01_RS10185;anticodon=(pos:19929..19931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10185;product=tRNA-Met NZ_PJUR01000031.1 tRNAscan-SE exon 19895 19968 . + . ID=exon-CYJ01_RS10185-1;Parent=rna-CYJ01_RS10185;anticodon=(pos:19929..19931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10185;product=tRNA-Met ##sequence-region NZ_PJUR01000032.1 1 22611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000032.1 RefSeq region 1 22611 . + . ID=NZ_PJUR01000032.1:1..22611;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000032.1 RefSeq gene 462 1160 . - . ID=gene-CYJ01_RS10195;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10195;old_locus_tag=CYJ01_10195 NZ_PJUR01000032.1 Protein Homology CDS 462 1160 . - 0 ID=cds-WP_014614373.1;Parent=gene-CYJ01_RS10195;Dbxref=GenBank:WP_014614373.1;Name=WP_014614373.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165987.1;locus_tag=CYJ01_RS10195;product=adaptor protein MecA;protein_id=WP_014614373.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 1494 1889 . - . ID=gene-CYJ01_RS10200;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10200;old_locus_tag=CYJ01_10200 NZ_PJUR01000032.1 Protein Homology CDS 1494 1889 . - 0 ID=cds-WP_014614374.1;Parent=gene-CYJ01_RS10200;Dbxref=GenBank:WP_014614374.1;Name=WP_014614374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=CYJ01_RS10200;product=transcriptional regulator SpxA;protein_id=WP_014614374.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 2201 3190 . + . ID=gene-CYJ01_RS10205;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CYJ01_RS10205;old_locus_tag=CYJ01_10205 NZ_PJUR01000032.1 Protein Homology CDS 2201 3190 . + 0 ID=cds-WP_101457519.1;Parent=gene-CYJ01_RS10205;Dbxref=GenBank:WP_101457519.1;Name=WP_101457519.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=CYJ01_RS10205;product=tryptophan--tRNA ligase;protein_id=WP_101457519.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 3803 5467 . - . ID=gene-CYJ01_RS10210;Name=CYJ01_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10210;old_locus_tag=CYJ01_10210 NZ_PJUR01000032.1 Protein Homology CDS 3803 5467 . - 0 ID=cds-WP_020220047.1;Parent=gene-CYJ01_RS10210;Dbxref=GenBank:WP_020220047.1;Name=WP_020220047.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=CYJ01_RS10210;product=peptide ABC transporter substrate-binding protein;protein_id=WP_020220047.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 5490 6431 . - . ID=gene-CYJ01_RS10215;Name=CYJ01_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10215;old_locus_tag=CYJ01_10215 NZ_PJUR01000032.1 Protein Homology CDS 5490 6431 . - 0 ID=cds-WP_037543504.1;Parent=gene-CYJ01_RS10215;Dbxref=GenBank:WP_037543504.1;Name=WP_037543504.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614377.1;locus_tag=CYJ01_RS10215;product=ABC transporter ATP-binding protein;protein_id=WP_037543504.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 6424 7503 . - . ID=gene-CYJ01_RS10220;Name=CYJ01_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10220;old_locus_tag=CYJ01_10220 NZ_PJUR01000032.1 Protein Homology CDS 6424 7503 . - 0 ID=cds-WP_014614378.1;Parent=gene-CYJ01_RS10220;Dbxref=GenBank:WP_014614378.1;Name=WP_014614378.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614378.1;locus_tag=CYJ01_RS10220;product=ABC transporter ATP-binding protein;protein_id=WP_014614378.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 7518 8579 . - . ID=gene-CYJ01_RS10225;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=CYJ01_RS10225;old_locus_tag=CYJ01_10225 NZ_PJUR01000032.1 Protein Homology CDS 7518 8579 . - 0 ID=cds-WP_020220060.1;Parent=gene-CYJ01_RS10225;Dbxref=GenBank:WP_020220060.1;Name=WP_020220060.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=CYJ01_RS10225;product=oligopeptide ABC transporter permease;protein_id=WP_020220060.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 8579 9505 . - . ID=gene-CYJ01_RS10230;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=CYJ01_RS10230;old_locus_tag=CYJ01_10230 NZ_PJUR01000032.1 Protein Homology CDS 8579 9505 . - 0 ID=cds-WP_014614380.1;Parent=gene-CYJ01_RS10230;Dbxref=GenBank:WP_014614380.1;Name=WP_014614380.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CYJ01_RS10230;product=oligopeptide ABC transporter permease;protein_id=WP_014614380.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 9751 10128 . + . ID=gene-CYJ01_RS10235;Name=CYJ01_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10235;old_locus_tag=CYJ01_10235 NZ_PJUR01000032.1 Protein Homology CDS 9751 10128 . + 0 ID=cds-WP_014614381.1;Parent=gene-CYJ01_RS10235;Dbxref=GenBank:WP_014614381.1;Name=WP_014614381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614381.1;locus_tag=CYJ01_RS10235;product=DUF3899 domain-containing protein;protein_id=WP_014614381.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 10623 11867 . - . ID=gene-CYJ01_RS10240;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CYJ01_RS10240;old_locus_tag=CYJ01_10240 NZ_PJUR01000032.1 Protein Homology CDS 10623 11867 . - 0 ID=cds-WP_014614382.1;Parent=gene-CYJ01_RS10240;Dbxref=GenBank:WP_014614382.1;Name=WP_014614382.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=CYJ01_RS10240;product=beta-ketoacyl-ACP synthase II;protein_id=WP_014614382.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 11886 12827 . - . ID=gene-CYJ01_RS10245;Name=CYJ01_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10245;old_locus_tag=CYJ01_10245 NZ_PJUR01000032.1 Protein Homology CDS 11886 12827 . - 0 ID=cds-WP_014614383.1;Parent=gene-CYJ01_RS10245;Dbxref=GenBank:WP_014614383.1;Name=WP_014614383.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CYJ01_RS10245;product=beta-ketoacyl-ACP synthase III;protein_id=WP_014614383.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 12977 13174 . + . ID=gene-CYJ01_RS10250;Name=CYJ01_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10250;old_locus_tag=CYJ01_10250 NZ_PJUR01000032.1 Protein Homology CDS 12977 13174 . + 0 ID=cds-WP_014614384.1;Parent=gene-CYJ01_RS10250;Dbxref=GenBank:WP_014614384.1;Name=WP_014614384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614384.1;locus_tag=CYJ01_RS10250;product=DUF2929 family protein;protein_id=WP_014614384.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 13325 14230 . - . ID=gene-CYJ01_RS10255;Name=CYJ01_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10255;old_locus_tag=CYJ01_10255 NZ_PJUR01000032.1 Protein Homology CDS 13325 14230 . - 0 ID=cds-WP_014614385.1;Parent=gene-CYJ01_RS10255;Dbxref=GenBank:WP_014614385.1;Name=WP_014614385.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614385.1;locus_tag=CYJ01_RS10255;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_014614385.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 14598 17219 . - . ID=gene-CYJ01_RS10260;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10260;old_locus_tag=CYJ01_10260 NZ_PJUR01000032.1 Protein Homology CDS 14598 17219 . - 0 ID=cds-WP_101457520.1;Parent=gene-CYJ01_RS10260;Dbxref=GenBank:WP_101457520.1;Name=WP_101457520.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166000.1;locus_tag=CYJ01_RS10260;product=ATP-dependent chaperone ClpB;protein_id=WP_101457520.1;transl_table=11 NZ_PJUR01000032.1 RefSeq pseudogene 17497 17643 . + . ID=gene-CYJ01_RS12525;Name=CYJ01_RS12525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12525;partial=true;pseudo=true;start_range=.,17497 NZ_PJUR01000032.1 Protein Homology CDS 17497 17643 . + 0 ID=cds-CYJ01_RS12525;Parent=gene-CYJ01_RS12525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ01_RS12525;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,17497;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 17825 19669 . - . ID=gene-CYJ01_RS10265;Name=CYJ01_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10265;old_locus_tag=CYJ01_10265 NZ_PJUR01000032.1 Protein Homology CDS 17825 19669 . - 0 ID=cds-WP_014614388.1;Parent=gene-CYJ01_RS10265;Dbxref=GenBank:WP_014614388.1;Name=WP_014614388.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614388.1;locus_tag=CYJ01_RS10265;product=acyltransferase family protein;protein_id=WP_014614388.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 19939 20247 . - . ID=gene-CYJ01_RS10270;Name=CYJ01_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10270;old_locus_tag=CYJ01_10270 NZ_PJUR01000032.1 Protein Homology CDS 19939 20247 . - 0 ID=cds-WP_014614389.1;Parent=gene-CYJ01_RS10270;Dbxref=GenBank:WP_014614389.1;Name=WP_014614389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=CYJ01_RS10270;product=metal-sulfur cluster assembly factor;protein_id=WP_014614389.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 20361 21185 . + . ID=gene-CYJ01_RS10275;Name=CYJ01_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10275;old_locus_tag=CYJ01_10275 NZ_PJUR01000032.1 Protein Homology CDS 20361 21185 . + 0 ID=cds-WP_014614390.1;Parent=gene-CYJ01_RS10275;Dbxref=GenBank:WP_014614390.1;Name=WP_014614390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614390.1;locus_tag=CYJ01_RS10275;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014614390.1;transl_table=11 NZ_PJUR01000032.1 RefSeq gene 21216 22541 . + . ID=gene-CYJ01_RS10280;Name=CYJ01_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10280;old_locus_tag=CYJ01_10280 NZ_PJUR01000032.1 Protein Homology CDS 21216 22541 . + 0 ID=cds-WP_101457521.1;Parent=gene-CYJ01_RS10280;Dbxref=GenBank:WP_101457521.1;Name=WP_101457521.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=CYJ01_RS10280;product=CoA-disulfide reductase;protein_id=WP_101457521.1;transl_table=11 ##sequence-region NZ_PJUR01000033.1 1 18785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000033.1 RefSeq region 1 18785 . + . ID=NZ_PJUR01000033.1:1..18785;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000033.1 RefSeq gene 195 371 . - . ID=gene-CYJ01_RS12155;Name=CYJ01_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12155 NZ_PJUR01000033.1 Protein Homology CDS 195 371 . - 0 ID=cds-WP_014612966.1;Parent=gene-CYJ01_RS12155;Dbxref=GenBank:WP_014612966.1;Name=WP_014612966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=CYJ01_RS12155;product=hypothetical protein;protein_id=WP_014612966.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 946 1632 . - . ID=gene-CYJ01_RS10290;Name=CYJ01_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10290;old_locus_tag=CYJ01_10290 NZ_PJUR01000033.1 Protein Homology CDS 946 1632 . - 0 ID=cds-WP_014612965.1;Parent=gene-CYJ01_RS10290;Dbxref=GenBank:WP_014612965.1;Name=WP_014612965.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612965.1;locus_tag=CYJ01_RS10290;product=LrgB family protein;protein_id=WP_014612965.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 1629 2021 . - . ID=gene-CYJ01_RS10295;Name=CYJ01_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10295;old_locus_tag=CYJ01_10295 NZ_PJUR01000033.1 Protein Homology CDS 1629 2021 . - 0 ID=cds-WP_014612964.1;Parent=gene-CYJ01_RS10295;Dbxref=GenBank:WP_014612964.1;Name=WP_014612964.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164941.1;locus_tag=CYJ01_RS10295;product=CidA/LrgA family protein;protein_id=WP_014612964.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 2099 3028 . - . ID=gene-CYJ01_RS10300;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CYJ01_RS10300;old_locus_tag=CYJ01_10300 NZ_PJUR01000033.1 Protein Homology CDS 2099 3028 . - 0 ID=cds-WP_015729636.1;Parent=gene-CYJ01_RS10300;Dbxref=GenBank:WP_015729636.1;Name=WP_015729636.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729636.1;locus_tag=CYJ01_RS10300;product=cidABC operon transcriptional activator CidR;protein_id=WP_015729636.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 3186 4415 . + . ID=gene-CYJ01_RS10305;Name=CYJ01_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10305;old_locus_tag=CYJ01_10305 NZ_PJUR01000033.1 Protein Homology CDS 3186 4415 . + 0 ID=cds-WP_041613207.1;Parent=gene-CYJ01_RS10305;Dbxref=GenBank:WP_041613207.1;Name=WP_041613207.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167237.1;locus_tag=CYJ01_RS10305;product=MFS transporter;protein_id=WP_041613207.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 4772 6004 . - . ID=gene-CYJ01_RS10315;Name=CYJ01_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10315;old_locus_tag=CYJ01_10315 NZ_PJUR01000033.1 Protein Homology CDS 4772 6004 . - 0 ID=cds-WP_015729639.1;Parent=gene-CYJ01_RS10315;Dbxref=GenBank:WP_015729639.1;Name=WP_015729639.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612961.1;locus_tag=CYJ01_RS10315;product=ATP-grasp domain-containing protein;protein_id=WP_015729639.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 6001 7248 . - . ID=gene-CYJ01_RS10320;Name=CYJ01_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10320;old_locus_tag=CYJ01_10320 NZ_PJUR01000033.1 Protein Homology CDS 6001 7248 . - 0 ID=cds-WP_101457522.1;Parent=gene-CYJ01_RS10320;Dbxref=GenBank:WP_101457522.1;Name=WP_101457522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612960.1;locus_tag=CYJ01_RS10320;product=ATP-grasp domain-containing protein;protein_id=WP_101457522.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 7267 8952 . - . ID=gene-CYJ01_RS10325;Name=CYJ01_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10325;old_locus_tag=CYJ01_10325 NZ_PJUR01000033.1 Protein Homology CDS 7267 8952 . - 0 ID=cds-WP_101457523.1;Parent=gene-CYJ01_RS10325;Dbxref=GenBank:WP_101457523.1;Name=WP_101457523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729641.1;locus_tag=CYJ01_RS10325;product=hypothetical protein;protein_id=WP_101457523.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 8952 9212 . - . ID=gene-CYJ01_RS10330;Name=CYJ01_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10330;old_locus_tag=CYJ01_10330 NZ_PJUR01000033.1 Protein Homology CDS 8952 9212 . - 0 ID=cds-WP_020219461.1;Parent=gene-CYJ01_RS10330;Dbxref=GenBank:WP_020219461.1;Name=WP_020219461.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219461.1;locus_tag=CYJ01_RS10330;product=ferredoxin;protein_id=WP_020219461.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 9416 9838 . - . ID=gene-CYJ01_RS10335;Name=CYJ01_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10335;old_locus_tag=CYJ01_10335 NZ_PJUR01000033.1 Protein Homology CDS 9416 9838 . - 0 ID=cds-WP_014612957.1;Parent=gene-CYJ01_RS10335;Dbxref=GenBank:WP_014612957.1;Name=WP_014612957.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=CYJ01_RS10335;product=universal stress protein;protein_id=WP_014612957.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 10140 11042 . - . ID=gene-CYJ01_RS10340;Name=CYJ01_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10340;old_locus_tag=CYJ01_10340 NZ_PJUR01000033.1 Protein Homology CDS 10140 11042 . - 0 ID=cds-WP_101457524.1;Parent=gene-CYJ01_RS10340;Dbxref=GenBank:WP_101457524.1;Name=WP_101457524.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=CYJ01_RS10340;product=CobW family GTP-binding protein;protein_id=WP_101457524.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 11043 11588 . - . ID=gene-CYJ01_RS10345;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CYJ01_RS10345;old_locus_tag=CYJ01_10345 NZ_PJUR01000033.1 Protein Homology CDS 11043 11588 . - 0 ID=cds-WP_101457525.1;Parent=gene-CYJ01_RS10345;Dbxref=GenBank:WP_101457525.1;Name=WP_101457525.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=CYJ01_RS10345;product=dCTP deaminase;protein_id=WP_101457525.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 11928 13643 . - . ID=gene-CYJ01_RS10350;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10350;old_locus_tag=CYJ01_10350 NZ_PJUR01000033.1 Protein Homology CDS 11928 13643 . - 0 ID=cds-WP_014612954.1;Parent=gene-CYJ01_RS10350;Dbxref=GenBank:WP_014612954.1;Name=WP_014612954.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CYJ01_RS10350;product=urease subunit alpha;protein_id=WP_014612954.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 13640 13996 . - . ID=gene-CYJ01_RS10355;Name=CYJ01_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10355;old_locus_tag=CYJ01_10355 NZ_PJUR01000033.1 Protein Homology CDS 13640 13996 . - 0 ID=cds-WP_041614887.1;Parent=gene-CYJ01_RS10355;Dbxref=GenBank:WP_041614887.1;Name=WP_041614887.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=CYJ01_RS10355;product=urease subunit beta;protein_id=WP_041614887.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 14009 14311 . - . ID=gene-CYJ01_RS10360;Name=CYJ01_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10360;old_locus_tag=CYJ01_10360 NZ_PJUR01000033.1 Protein Homology CDS 14009 14311 . - 0 ID=cds-WP_014612952.1;Parent=gene-CYJ01_RS10360;Dbxref=GenBank:WP_014612952.1;Name=WP_014612952.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=CYJ01_RS10360;product=urease subunit gamma;protein_id=WP_014612952.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 14559 15458 . + . ID=gene-CYJ01_RS10365;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CYJ01_RS10365;old_locus_tag=CYJ01_10365 NZ_PJUR01000033.1 Protein Homology CDS 14559 15458 . + 0 ID=cds-WP_100006586.1;Parent=gene-CYJ01_RS10365;Dbxref=GenBank:WP_100006586.1;Name=WP_100006586.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612951.1;locus_tag=CYJ01_RS10365;product=urea transporter;protein_id=WP_100006586.1;transl_table=11 NZ_PJUR01000033.1 RefSeq gene 15628 16572 . - . ID=gene-CYJ01_RS10370;Name=CYJ01_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10370;old_locus_tag=CYJ01_10370 NZ_PJUR01000033.1 Protein Homology CDS 15628 16572 . - 0 ID=cds-WP_099986897.1;Parent=gene-CYJ01_RS10370;Dbxref=GenBank:WP_099986897.1;Name=WP_099986897.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=CYJ01_RS10370;product=cation diffusion facilitator family transporter;protein_id=WP_099986897.1;transl_table=11 NZ_PJUR01000033.1 RefSeq pseudogene 17091 17177 . + . ID=gene-CYJ01_RS12560;Name=CYJ01_RS12560;end_range=17177,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12560;partial=true;pseudo=true NZ_PJUR01000033.1 Protein Homology CDS 17091 17177 . + 0 ID=cds-CYJ01_RS12560;Parent=gene-CYJ01_RS12560;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17177,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=CYJ01_RS12560;partial=true;product=YSIRK-type signal peptide-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000033.1 RefSeq pseudogene 17250 18557 . + . ID=gene-CYJ01_RS10375;Name=lip;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=CYJ01_RS10375;old_locus_tag=CYJ01_10375;partial=true;pseudo=true;start_range=.,17250 NZ_PJUR01000033.1 Protein Homology CDS 17250 18557 . + 0 ID=cds-CYJ01_RS10375;Parent=gene-CYJ01_RS10375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497700.1;locus_tag=CYJ01_RS10375;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;start_range=.,17250;transl_table=11 ##sequence-region NZ_PJUR01000034.1 1 20724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000034.1 RefSeq region 1 20724 . + . ID=NZ_PJUR01000034.1:1..20724;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000034.1 RefSeq gene 1253 1624 . + . ID=gene-CYJ01_RS10380;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10380;old_locus_tag=CYJ01_10380 NZ_PJUR01000034.1 Protein Homology CDS 1253 1624 . + 0 ID=cds-WP_101457527.1;Parent=gene-CYJ01_RS10380;Dbxref=GenBank:WP_101457527.1;Name=WP_101457527.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=CYJ01_RS10380;product=global transcriptional regulator SarA;protein_id=WP_101457527.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 1835 2551 . - . ID=gene-CYJ01_RS10385;Name=CYJ01_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10385;old_locus_tag=CYJ01_10385 NZ_PJUR01000034.1 Protein Homology CDS 1835 2551 . - 0 ID=cds-WP_101457528.1;Parent=gene-CYJ01_RS10385;Dbxref=GenBank:WP_101457528.1;Name=WP_101457528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614658.1;locus_tag=CYJ01_RS10385;product=hypothetical protein;protein_id=WP_101457528.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 2640 3143 . - . ID=gene-CYJ01_RS10390;Name=CYJ01_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10390;old_locus_tag=CYJ01_10390 NZ_PJUR01000034.1 Protein Homology CDS 2640 3143 . - 0 ID=cds-WP_014614659.1;Parent=gene-CYJ01_RS10390;Dbxref=GenBank:WP_014614659.1;Name=WP_014614659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167340.1;locus_tag=CYJ01_RS10390;product=SA0570 family protein;protein_id=WP_014614659.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 3235 4035 . - . ID=gene-CYJ01_RS10395;Name=CYJ01_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10395;old_locus_tag=CYJ01_10395 NZ_PJUR01000034.1 Protein Homology CDS 3235 4035 . - 0 ID=cds-WP_014614660.1;Parent=gene-CYJ01_RS10395;Dbxref=GenBank:WP_014614660.1;Name=WP_014614660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728680.1;locus_tag=CYJ01_RS10395;product=alpha/beta fold hydrolase;protein_id=WP_014614660.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 4035 4739 . - . ID=gene-CYJ01_RS10400;Name=CYJ01_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10400;old_locus_tag=CYJ01_10400 NZ_PJUR01000034.1 Protein Homology CDS 4035 4739 . - 0 ID=cds-WP_014614661.1;Parent=gene-CYJ01_RS10400;Dbxref=GenBank:WP_014614661.1;Name=WP_014614661.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=CYJ01_RS10400;product=HAD family hydrolase;protein_id=WP_014614661.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 4796 5746 . - . ID=gene-CYJ01_RS10405;Name=CYJ01_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10405;old_locus_tag=CYJ01_10405 NZ_PJUR01000034.1 Protein Homology CDS 4796 5746 . - 0 ID=cds-WP_101457529.1;Parent=gene-CYJ01_RS10405;Dbxref=GenBank:WP_101457529.1;Name=WP_101457529.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=CYJ01_RS10405;product=FecCD family ABC transporter permease;protein_id=WP_101457529.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 5736 6617 . - . ID=gene-CYJ01_RS10410;Name=CYJ01_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10410;old_locus_tag=CYJ01_10410 NZ_PJUR01000034.1 Protein Homology CDS 5736 6617 . - 0 ID=cds-WP_101457530.1;Parent=gene-CYJ01_RS10410;Dbxref=GenBank:WP_101457530.1;Name=WP_101457530.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=CYJ01_RS10410;product=ABC transporter substrate-binding protein;protein_id=WP_101457530.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 7139 7993 . + . ID=gene-CYJ01_RS10415;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;gene_synonym=efeM,ywbM;locus_tag=CYJ01_RS10415;old_locus_tag=CYJ01_10415 NZ_PJUR01000034.1 Protein Homology CDS 7139 7993 . + 0 ID=cds-WP_101457531.1;Parent=gene-CYJ01_RS10415;Dbxref=GenBank:WP_101457531.1;Name=WP_101457531.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737198.1;locus_tag=CYJ01_RS10415;product=iron uptake system protein EfeO;protein_id=WP_101457531.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 7990 9216 . + . ID=gene-CYJ01_RS10420;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10420;old_locus_tag=CYJ01_10420 NZ_PJUR01000034.1 Protein Homology CDS 7990 9216 . + 0 ID=cds-WP_101457532.1;Parent=gene-CYJ01_RS10420;Dbxref=GenBank:WP_101457532.1;Name=WP_101457532.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166265.1;locus_tag=CYJ01_RS10420;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_101457532.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 9197 10909 . + . ID=gene-CYJ01_RS10425;Name=CYJ01_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10425;old_locus_tag=CYJ01_10425 NZ_PJUR01000034.1 Protein Homology CDS 9197 10909 . + 0 ID=cds-WP_101457533.1;Parent=gene-CYJ01_RS10425;Dbxref=GenBank:WP_101457533.1;Name=WP_101457533.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166266.1;locus_tag=CYJ01_RS10425;product=FTR1 family protein;protein_id=WP_101457533.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 11550 13286 . + . ID=gene-CYJ01_RS10430;Name=CYJ01_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10430;old_locus_tag=CYJ01_10430 NZ_PJUR01000034.1 Protein Homology CDS 11550 13286 . + 0 ID=cds-WP_014613503.1;Parent=gene-CYJ01_RS10430;Dbxref=GenBank:WP_014613503.1;Name=WP_014613503.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=CYJ01_RS10430;product=ABC transporter ATP-binding protein;protein_id=WP_014613503.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 13812 15389 . + . ID=gene-CYJ01_RS10435;Name=CYJ01_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10435;old_locus_tag=CYJ01_10435 NZ_PJUR01000034.1 Protein Homology CDS 13812 15389 . + 0 ID=cds-WP_101457534.1;Parent=gene-CYJ01_RS10435;Dbxref=GenBank:WP_101457534.1;Name=WP_101457534.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613505.1;locus_tag=CYJ01_RS10435;product=FMN-binding glutamate synthase family protein;protein_id=WP_101457534.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 15537 16631 . - . ID=gene-CYJ01_RS10440;Name=CYJ01_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10440;old_locus_tag=CYJ01_10440 NZ_PJUR01000034.1 Protein Homology CDS 15537 16631 . - 0 ID=cds-WP_014613506.1;Parent=gene-CYJ01_RS10440;Dbxref=GenBank:WP_014613506.1;Name=WP_014613506.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=CYJ01_RS10440;product=FUSC family protein;protein_id=WP_014613506.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 16725 18011 . - . ID=gene-CYJ01_RS10445;Name=CYJ01_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10445;old_locus_tag=CYJ01_10445 NZ_PJUR01000034.1 Protein Homology CDS 16725 18011 . - 0 ID=cds-WP_014613507.1;Parent=gene-CYJ01_RS10445;Dbxref=GenBank:WP_014613507.1;Name=WP_014613507.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169387.1;locus_tag=CYJ01_RS10445;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014613507.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 18094 18552 . + . ID=gene-CYJ01_RS10450;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CYJ01_RS10450;old_locus_tag=CYJ01_10450 NZ_PJUR01000034.1 Protein Homology CDS 18094 18552 . + 0 ID=cds-WP_014613508.1;Parent=gene-CYJ01_RS10450;Dbxref=GenBank:WP_014613508.1;Name=WP_014613508.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=CYJ01_RS10450;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_014613508.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 18559 19509 . + . ID=gene-CYJ01_RS10455;Name=CYJ01_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10455;old_locus_tag=CYJ01_10455 NZ_PJUR01000034.1 Protein Homology CDS 18559 19509 . + 0 ID=cds-WP_101457535.1;Parent=gene-CYJ01_RS10455;Dbxref=GenBank:WP_101457535.1;Name=WP_101457535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=CYJ01_RS10455;product=phosphoglycerate dehydrogenase;protein_id=WP_101457535.1;transl_table=11 NZ_PJUR01000034.1 RefSeq gene 19590 20048 . + . ID=gene-CYJ01_RS10460;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=CYJ01_RS10460;old_locus_tag=CYJ01_10460 NZ_PJUR01000034.1 Protein Homology CDS 19590 20048 . + 0 ID=cds-WP_014613510.1;Parent=gene-CYJ01_RS10460;Dbxref=GenBank:WP_014613510.1;Name=WP_014613510.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613510.1;locus_tag=CYJ01_RS10460;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_014613510.1;transl_table=11 ##sequence-region NZ_PJUR01000035.1 1 15863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000035.1 RefSeq region 1 15863 . + . ID=NZ_PJUR01000035.1:1..15863;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000035.1 RefSeq gene 234 1256 . - . ID=gene-CYJ01_RS10465;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CYJ01_RS10465;old_locus_tag=CYJ01_10465 NZ_PJUR01000035.1 Protein Homology CDS 234 1256 . - 0 ID=cds-WP_065354124.1;Parent=gene-CYJ01_RS10465;Dbxref=GenBank:WP_065354124.1;Name=WP_065354124.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=CYJ01_RS10465;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_065354124.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 1249 1719 . - . ID=gene-CYJ01_RS10470;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CYJ01_RS10470;old_locus_tag=CYJ01_10470 NZ_PJUR01000035.1 Protein Homology CDS 1249 1719 . - 0 ID=cds-WP_014613398.1;Parent=gene-CYJ01_RS10470;Dbxref=GenBank:WP_014613398.1;Name=WP_014613398.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613398.1;locus_tag=CYJ01_RS10470;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_014613398.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 1698 2354 . - . ID=gene-CYJ01_RS10475;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10475;old_locus_tag=CYJ01_10475 NZ_PJUR01000035.1 Protein Homology CDS 1698 2354 . - 0 ID=cds-WP_063278594.1;Parent=gene-CYJ01_RS10475;Dbxref=GenBank:WP_063278594.1;Name=WP_063278594.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729420.1;locus_tag=CYJ01_RS10475;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_063278594.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 2335 2793 . - . ID=gene-CYJ01_RS10480;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CYJ01_RS10480;old_locus_tag=CYJ01_10480 NZ_PJUR01000035.1 Protein Homology CDS 2335 2793 . - 0 ID=cds-WP_014613396.1;Parent=gene-CYJ01_RS10480;Dbxref=GenBank:WP_014613396.1;Name=WP_014613396.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167544.1;locus_tag=CYJ01_RS10480;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014613396.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 3337 5025 . + . ID=gene-CYJ01_RS10485;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CYJ01_RS10485;old_locus_tag=CYJ01_10485 NZ_PJUR01000035.1 Protein Homology CDS 3337 5025 . + 0 ID=cds-WP_101457536.1;Parent=gene-CYJ01_RS10485;Dbxref=GenBank:WP_101457536.1;Name=WP_101457536.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=CYJ01_RS10485;product=dihydroxy-acid dehydratase;protein_id=WP_101457536.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 5046 6800 . + . ID=gene-CYJ01_RS10490;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10490;old_locus_tag=CYJ01_10490 NZ_PJUR01000035.1 Protein Homology CDS 5046 6800 . + 0 ID=cds-WP_014613394.1;Parent=gene-CYJ01_RS10490;Dbxref=GenBank:WP_014613394.1;Name=WP_014613394.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167542.1;locus_tag=CYJ01_RS10490;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_014613394.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 6797 7270 . + . ID=gene-CYJ01_RS10495;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CYJ01_RS10495;old_locus_tag=CYJ01_10495 NZ_PJUR01000035.1 Protein Homology CDS 6797 7270 . + 0 ID=cds-WP_014613393.1;Parent=gene-CYJ01_RS10495;Dbxref=GenBank:WP_014613393.1;Name=WP_014613393.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=CYJ01_RS10495;product=acetolactate synthase small subunit;protein_id=WP_014613393.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 7305 8309 . + . ID=gene-CYJ01_RS10500;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10500;old_locus_tag=CYJ01_10500 NZ_PJUR01000035.1 Protein Homology CDS 7305 8309 . + 0 ID=cds-WP_063278596.1;Parent=gene-CYJ01_RS10500;Dbxref=GenBank:WP_063278596.1;Name=WP_063278596.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=CYJ01_RS10500;product=ketol-acid reductoisomerase;protein_id=WP_063278596.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 8331 9863 . + . ID=gene-CYJ01_RS10505;Name=CYJ01_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10505;old_locus_tag=CYJ01_10505 NZ_PJUR01000035.1 Protein Homology CDS 8331 9863 . + 0 ID=cds-WP_096536083.1;Parent=gene-CYJ01_RS10505;Dbxref=GenBank:WP_096536083.1;Name=WP_096536083.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167540.1;locus_tag=CYJ01_RS10505;product=2-isopropylmalate synthase;protein_id=WP_096536083.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 9860 10909 . + . ID=gene-CYJ01_RS10510;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10510;old_locus_tag=CYJ01_10510 NZ_PJUR01000035.1 Protein Homology CDS 9860 10909 . + 0 ID=cds-WP_101457537.1;Parent=gene-CYJ01_RS10510;Dbxref=GenBank:WP_101457537.1;Name=WP_101457537.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=CYJ01_RS10510;product=3-isopropylmalate dehydrogenase;protein_id=WP_101457537.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 10913 12286 . + . ID=gene-CYJ01_RS10515;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10515;old_locus_tag=CYJ01_10515 NZ_PJUR01000035.1 Protein Homology CDS 10913 12286 . + 0 ID=cds-WP_014613389.1;Parent=gene-CYJ01_RS10515;Dbxref=GenBank:WP_014613389.1;Name=WP_014613389.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613389.1;locus_tag=CYJ01_RS10515;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_014613389.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 12286 12858 . + . ID=gene-CYJ01_RS10520;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CYJ01_RS10520;old_locus_tag=CYJ01_10520 NZ_PJUR01000035.1 Protein Homology CDS 12286 12858 . + 0 ID=cds-WP_014613388.1;Parent=gene-CYJ01_RS10520;Dbxref=GenBank:WP_014613388.1;Name=WP_014613388.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167537.1;locus_tag=CYJ01_RS10520;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_014613388.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 12871 14139 . + . ID=gene-CYJ01_RS10525;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10525;old_locus_tag=CYJ01_10525 NZ_PJUR01000035.1 Protein Homology CDS 12871 14139 . + 0 ID=cds-WP_014613387.1;Parent=gene-CYJ01_RS10525;Dbxref=GenBank:WP_014613387.1;Name=WP_014613387.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CYJ01_RS10525;product=threonine ammonia-lyase IlvA;protein_id=WP_014613387.1;transl_table=11 NZ_PJUR01000035.1 RefSeq gene 14209 15393 . - . ID=gene-CYJ01_RS10530;Name=CYJ01_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10530;old_locus_tag=CYJ01_10530 NZ_PJUR01000035.1 Protein Homology CDS 14209 15393 . - 0 ID=cds-WP_101457538.1;Parent=gene-CYJ01_RS10530;Dbxref=GenBank:WP_101457538.1;Name=WP_101457538.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613386.1;locus_tag=CYJ01_RS10530;product=MFS transporter;protein_id=WP_101457538.1;transl_table=11 ##sequence-region NZ_PJUR01000036.1 1 21257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000036.1 RefSeq region 1 21257 . + . ID=NZ_PJUR01000036.1:1..21257;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000036.1 RefSeq gene 71 721 . + . ID=gene-CYJ01_RS10535;Name=CYJ01_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10535;old_locus_tag=CYJ01_10535 NZ_PJUR01000036.1 Protein Homology CDS 71 721 . + 0 ID=cds-WP_015729248.1;Parent=gene-CYJ01_RS10535;Dbxref=GenBank:WP_015729248.1;Name=WP_015729248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613782.1;locus_tag=CYJ01_RS10535;product=NfeD family protein;protein_id=WP_015729248.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 740 1735 . + . ID=gene-CYJ01_RS10540;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10540;old_locus_tag=CYJ01_10540 NZ_PJUR01000036.1 Protein Homology CDS 740 1735 . + 0 ID=cds-WP_014613783.1;Parent=gene-CYJ01_RS10540;Dbxref=GenBank:WP_014613783.1;Name=WP_014613783.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613783.1;locus_tag=CYJ01_RS10540;product=flotillin-like protein FloA;protein_id=WP_014613783.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 1749 2363 . + . ID=gene-CYJ01_RS10545;Name=CYJ01_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10545;old_locus_tag=CYJ01_10545 NZ_PJUR01000036.1 Protein Homology CDS 1749 2363 . + 0 ID=cds-WP_014613784.1;Parent=gene-CYJ01_RS10545;Dbxref=GenBank:WP_014613784.1;Name=WP_014613784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729247.1;locus_tag=CYJ01_RS10545;product=hypothetical protein;protein_id=WP_014613784.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 2714 3658 . + . ID=gene-CYJ01_RS10550;Name=CYJ01_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10550;old_locus_tag=CYJ01_10550 NZ_PJUR01000036.1 Protein Homology CDS 2714 3658 . + 0 ID=cds-WP_014613785.1;Parent=gene-CYJ01_RS10550;Dbxref=GenBank:WP_014613785.1;Name=WP_014613785.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168656.1;locus_tag=CYJ01_RS10550;product=PhoH family protein;protein_id=WP_014613785.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 3662 4123 . + . ID=gene-CYJ01_RS10555;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CYJ01_RS10555;old_locus_tag=CYJ01_10555 NZ_PJUR01000036.1 Protein Homology CDS 3662 4123 . + 0 ID=cds-WP_014613786.1;Parent=gene-CYJ01_RS10555;Dbxref=GenBank:WP_014613786.1;Name=WP_014613786.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=CYJ01_RS10555;product=rRNA maturation RNase YbeY;protein_id=WP_014613786.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 4123 4470 . + . ID=gene-CYJ01_RS10560;Name=CYJ01_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10560;old_locus_tag=CYJ01_10560 NZ_PJUR01000036.1 Protein Homology CDS 4123 4470 . + 0 ID=cds-WP_014613787.1;Parent=gene-CYJ01_RS10560;Dbxref=GenBank:WP_014613787.1;Name=WP_014613787.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165202.1;locus_tag=CYJ01_RS10560;product=diacylglycerol kinase family protein;protein_id=WP_014613787.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 4486 4893 . + . ID=gene-CYJ01_RS10565;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CYJ01_RS10565;old_locus_tag=CYJ01_10565 NZ_PJUR01000036.1 Protein Homology CDS 4486 4893 . + 0 ID=cds-WP_014613788.1;Parent=gene-CYJ01_RS10565;Dbxref=GenBank:WP_014613788.1;Name=WP_014613788.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165203.1;locus_tag=CYJ01_RS10565;product=cytidine deaminase;protein_id=WP_014613788.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 4890 5786 . + . ID=gene-CYJ01_RS10570;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CYJ01_RS10570;old_locus_tag=CYJ01_10570 NZ_PJUR01000036.1 Protein Homology CDS 4890 5786 . + 0 ID=cds-WP_014613789.1;Parent=gene-CYJ01_RS10570;Dbxref=GenBank:WP_014613789.1;Name=WP_014613789.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=CYJ01_RS10570;product=GTPase Era;protein_id=WP_014613789.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 5811 6581 . + . ID=gene-CYJ01_RS10575;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CYJ01_RS10575;old_locus_tag=CYJ01_10575 NZ_PJUR01000036.1 Protein Homology CDS 5811 6581 . + 0 ID=cds-WP_101457539.1;Parent=gene-CYJ01_RS10575;Dbxref=GenBank:WP_101457539.1;Name=WP_101457539.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=CYJ01_RS10575;product=DNA repair protein RecO;protein_id=WP_101457539.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 6797 8191 . - . ID=gene-CYJ01_RS10580;Name=CYJ01_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10580;old_locus_tag=CYJ01_10580 NZ_PJUR01000036.1 Protein Homology CDS 6797 8191 . - 0 ID=cds-WP_015729245.1;Parent=gene-CYJ01_RS10580;Dbxref=GenBank:WP_015729245.1;Name=WP_015729245.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165206.1;locus_tag=CYJ01_RS10580;product=glycine--tRNA ligase;protein_id=WP_015729245.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 8686 9306 . + . ID=gene-CYJ01_RS10585;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=CYJ01_RS10585;old_locus_tag=CYJ01_10585 NZ_PJUR01000036.1 Protein Homology CDS 8686 9306 . + 0 ID=cds-WP_101457540.1;Parent=gene-CYJ01_RS10585;Dbxref=GenBank:WP_101457540.1;Name=WP_101457540.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724599.1;locus_tag=CYJ01_RS10585;product=transcriptional regulator CcpN;protein_id=WP_101457540.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 9321 10148 . + . ID=gene-CYJ01_RS10590;Name=CYJ01_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10590;old_locus_tag=CYJ01_10590 NZ_PJUR01000036.1 Protein Homology CDS 9321 10148 . + 0 ID=cds-WP_014613793.1;Parent=gene-CYJ01_RS10590;Dbxref=GenBank:WP_014613793.1;Name=WP_014613793.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=CYJ01_RS10590;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_014613793.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 10221 12008 . + . ID=gene-CYJ01_RS10595;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CYJ01_RS10595;old_locus_tag=CYJ01_10595 NZ_PJUR01000036.1 Protein Homology CDS 10221 12008 . + 0 ID=cds-WP_014613794.1;Parent=gene-CYJ01_RS10595;Dbxref=GenBank:WP_014613794.1;Name=WP_014613794.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729243.1;locus_tag=CYJ01_RS10595;product=DNA primase;protein_id=WP_014613794.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 12026 13135 . + . ID=gene-CYJ01_RS10600;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CYJ01_RS10600;old_locus_tag=CYJ01_10600 NZ_PJUR01000036.1 Protein Homology CDS 12026 13135 . + 0 ID=cds-WP_014613795.1;Parent=gene-CYJ01_RS10600;Dbxref=GenBank:WP_014613795.1;Name=WP_014613795.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CYJ01_RS10600;product=RNA polymerase sigma factor RpoD;protein_id=WP_014613795.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 13651 14328 . + . ID=gene-CYJ01_RS10605;Name=CYJ01_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10605;old_locus_tag=CYJ01_10605 NZ_PJUR01000036.1 Protein Homology CDS 13651 14328 . + 0 ID=cds-WP_101457541.1;Parent=gene-CYJ01_RS10605;Dbxref=GenBank:WP_101457541.1;Name=WP_101457541.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=CYJ01_RS10605;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_101457541.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 14325 15428 . + . ID=gene-CYJ01_RS10610;Name=CYJ01_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10610;old_locus_tag=CYJ01_10610 NZ_PJUR01000036.1 Protein Homology CDS 14325 15428 . + 0 ID=cds-WP_101457542.1;Parent=gene-CYJ01_RS10610;Dbxref=GenBank:WP_101457542.1;Name=WP_101457542.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165212.1;locus_tag=CYJ01_RS10610;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_101457542.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 15582 16550 . - . ID=gene-CYJ01_RS10615;Name=CYJ01_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10615;old_locus_tag=CYJ01_10615 NZ_PJUR01000036.1 Protein Homology CDS 15582 16550 . - 0 ID=cds-WP_014613798.1;Parent=gene-CYJ01_RS10615;Dbxref=GenBank:WP_014613798.1;Name=WP_014613798.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=CYJ01_RS10615;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_014613798.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 16731 18065 . + . ID=gene-CYJ01_RS10620;Name=CYJ01_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10620;old_locus_tag=CYJ01_10620 NZ_PJUR01000036.1 Protein Homology CDS 16731 18065 . + 0 ID=cds-WP_014613799.1;Parent=gene-CYJ01_RS10620;Dbxref=GenBank:WP_014613799.1;Name=WP_014613799.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165214.1;locus_tag=CYJ01_RS10620;product=DEAD/DEAH box helicase;protein_id=WP_014613799.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 18090 18983 . + . ID=gene-CYJ01_RS10625;Name=CYJ01_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10625;old_locus_tag=CYJ01_10625 NZ_PJUR01000036.1 Protein Homology CDS 18090 18983 . + 0 ID=cds-WP_015729240.1;Parent=gene-CYJ01_RS10625;Dbxref=GenBank:WP_015729240.1;Name=WP_015729240.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219766.1;locus_tag=CYJ01_RS10625;product=deoxyribonuclease IV;protein_id=WP_015729240.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 19168 19938 . + . ID=gene-CYJ01_RS10630;Name=CYJ01_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10630;old_locus_tag=CYJ01_10630 NZ_PJUR01000036.1 Protein Homology CDS 19168 19938 . + 0 ID=cds-WP_014613801.1;Parent=gene-CYJ01_RS10630;Dbxref=GenBank:WP_014613801.1;Name=WP_014613801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219767.1;locus_tag=CYJ01_RS10630;product=metal ABC transporter ATP-binding protein;protein_id=WP_014613801.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 19935 20822 . + . ID=gene-CYJ01_RS10635;Name=CYJ01_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10635;old_locus_tag=CYJ01_10635 NZ_PJUR01000036.1 Protein Homology CDS 19935 20822 . + 0 ID=cds-WP_014613802.1;Parent=gene-CYJ01_RS10635;Dbxref=GenBank:WP_014613802.1;Name=WP_014613802.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=CYJ01_RS10635;product=metal ABC transporter permease;protein_id=WP_014613802.1;transl_table=11 NZ_PJUR01000036.1 RefSeq gene 20785 21198 . + . ID=gene-CYJ01_RS10640;Name=CYJ01_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10640;old_locus_tag=CYJ01_10640 NZ_PJUR01000036.1 Protein Homology CDS 20785 21198 . + 0 ID=cds-WP_020219768.1;Parent=gene-CYJ01_RS10640;Dbxref=GenBank:WP_020219768.1;Name=WP_020219768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382556.1;locus_tag=CYJ01_RS10640;product=Fur family transcriptional regulator;protein_id=WP_020219768.1;transl_table=11 ##sequence-region NZ_PJUR01000037.1 1 13358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000037.1 RefSeq region 1 13358 . + . ID=NZ_PJUR01000037.1:1..13358;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000037.1 RefSeq gene 721 1131 . + . ID=gene-CYJ01_RS10645;Name=CYJ01_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10645;old_locus_tag=CYJ01_10645 NZ_PJUR01000037.1 Protein Homology CDS 721 1131 . + 0 ID=cds-WP_101457543.1;Parent=gene-CYJ01_RS10645;Dbxref=GenBank:WP_101457543.1;Name=WP_101457543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728586.1;locus_tag=CYJ01_RS10645;product=hypothetical protein;protein_id=WP_101457543.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 1463 2803 . + . ID=gene-CYJ01_RS10650;Name=CYJ01_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10650;old_locus_tag=CYJ01_10650 NZ_PJUR01000037.1 Protein Homology CDS 1463 2803 . + 0 ID=cds-WP_101457544.1;Parent=gene-CYJ01_RS10650;Dbxref=GenBank:WP_101457544.1;Name=WP_101457544.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=CYJ01_RS10650;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_101457544.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 2806 3423 . + . ID=gene-CYJ01_RS10655;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CYJ01_RS10655;old_locus_tag=CYJ01_10655 NZ_PJUR01000037.1 Protein Homology CDS 2806 3423 . + 0 ID=cds-WP_014614823.1;Parent=gene-CYJ01_RS10655;Dbxref=GenBank:WP_014614823.1;Name=WP_014614823.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614823.1;locus_tag=CYJ01_RS10655;product=dTMP kinase;protein_id=WP_014614823.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 3493 3822 . + . ID=gene-CYJ01_RS10660;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10660;old_locus_tag=CYJ01_10660 NZ_PJUR01000037.1 Protein Homology CDS 3493 3822 . + 0 ID=cds-WP_014614822.1;Parent=gene-CYJ01_RS10660;Dbxref=GenBank:WP_014614822.1;Name=WP_014614822.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CYJ01_RS10660;product=cyclic di-AMP receptor DarA;protein_id=WP_014614822.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 4066 4998 . + . ID=gene-CYJ01_RS10665;Name=CYJ01_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10665;old_locus_tag=CYJ01_10665 NZ_PJUR01000037.1 Protein Homology CDS 4066 4998 . + 0 ID=cds-WP_037543979.1;Parent=gene-CYJ01_RS10665;Dbxref=GenBank:WP_037543979.1;Name=WP_037543979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=CYJ01_RS10665;product=DNA polymerase III delta subunit-related protein;protein_id=WP_037543979.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 5004 5807 . + . ID=gene-CYJ01_RS10670;Name=CYJ01_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10670;old_locus_tag=CYJ01_10670 NZ_PJUR01000037.1 Protein Homology CDS 5004 5807 . + 0 ID=cds-WP_014614820.1;Parent=gene-CYJ01_RS10670;Dbxref=GenBank:WP_014614820.1;Name=WP_014614820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=CYJ01_RS10670;product=PSP1 domain-containing protein;protein_id=WP_014614820.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 5820 6185 . + . ID=gene-CYJ01_RS10675;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10675;old_locus_tag=CYJ01_10675 NZ_PJUR01000037.1 Protein Homology CDS 5820 6185 . + 0 ID=cds-WP_014614819.1;Parent=gene-CYJ01_RS10675;Dbxref=GenBank:WP_014614819.1;Name=WP_014614819.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169136.1;locus_tag=CYJ01_RS10675;product=DNA replication initiation control protein YabA;protein_id=WP_014614819.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 6196 6921 . + . ID=gene-CYJ01_RS10680;Name=CYJ01_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10680;old_locus_tag=CYJ01_10680 NZ_PJUR01000037.1 Protein Homology CDS 6196 6921 . + 0 ID=cds-WP_014614818.1;Parent=gene-CYJ01_RS10680;Dbxref=GenBank:WP_014614818.1;Name=WP_014614818.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=CYJ01_RS10680;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014614818.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 6914 7162 . + . ID=gene-CYJ01_RS10685;Name=CYJ01_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10685;old_locus_tag=CYJ01_10685 NZ_PJUR01000037.1 Protein Homology CDS 6914 7162 . + 0 ID=cds-WP_014614817.1;Parent=gene-CYJ01_RS10685;Dbxref=GenBank:WP_014614817.1;Name=WP_014614817.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276773.1;locus_tag=CYJ01_RS10685;product=GIY-YIG nuclease family protein;protein_id=WP_014614817.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 7164 7997 . + . ID=gene-CYJ01_RS10690;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CYJ01_RS10690;old_locus_tag=CYJ01_10690 NZ_PJUR01000037.1 Protein Homology CDS 7164 7997 . + 0 ID=cds-WP_014614816.1;Parent=gene-CYJ01_RS10690;Dbxref=GenBank:WP_014614816.1;Name=WP_014614816.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166563.1;locus_tag=CYJ01_RS10690;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_014614816.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 8088 10061 . + . ID=gene-CYJ01_RS10695;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CYJ01_RS10695;old_locus_tag=CYJ01_10695 NZ_PJUR01000037.1 Protein Homology CDS 8088 10061 . + 0 ID=cds-WP_101457545.1;Parent=gene-CYJ01_RS10695;Dbxref=GenBank:WP_101457545.1;Name=WP_101457545.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=CYJ01_RS10695;product=methionine--tRNA ligase;protein_id=WP_101457545.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 10619 11386 . + . ID=gene-CYJ01_RS10700;Name=CYJ01_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10700;old_locus_tag=CYJ01_10700 NZ_PJUR01000037.1 Protein Homology CDS 10619 11386 . + 0 ID=cds-WP_101457546.1;Parent=gene-CYJ01_RS10700;Dbxref=GenBank:WP_101457546.1;Name=WP_101457546.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614814.1;locus_tag=CYJ01_RS10700;product=TatD family hydrolase;protein_id=WP_101457546.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 11426 11965 . + . ID=gene-CYJ01_RS10705;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CYJ01_RS10705;old_locus_tag=CYJ01_10705 NZ_PJUR01000037.1 Protein Homology CDS 11426 11965 . + 0 ID=cds-WP_014614813.1;Parent=gene-CYJ01_RS10705;Dbxref=GenBank:WP_014614813.1;Name=WP_014614813.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=CYJ01_RS10705;product=ribonuclease M5;protein_id=WP_014614813.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 11970 12860 . + . ID=gene-CYJ01_RS10710;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10710;old_locus_tag=CYJ01_10710 NZ_PJUR01000037.1 Protein Homology CDS 11970 12860 . + 0 ID=cds-WP_101457547.1;Parent=gene-CYJ01_RS10710;Dbxref=GenBank:WP_101457547.1;Name=WP_101457547.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=CYJ01_RS10710;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_101457547.1;transl_table=11 NZ_PJUR01000037.1 RefSeq gene 12960 13226 . + . ID=gene-CYJ01_RS10715;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=CYJ01_RS10715;old_locus_tag=CYJ01_10715 NZ_PJUR01000037.1 Protein Homology CDS 12960 13226 . + 0 ID=cds-WP_014614811.1;Parent=gene-CYJ01_RS10715;Dbxref=GenBank:WP_014614811.1;Name=WP_014614811.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=CYJ01_RS10715;product=biofilm formation stimulator Veg;protein_id=WP_014614811.1;transl_table=11 ##sequence-region NZ_PJUR01000038.1 1 13755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000038.1 RefSeq region 1 13755 . + . ID=NZ_PJUR01000038.1:1..13755;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000038.1 RefSeq gene 66 947 . + . ID=gene-CYJ01_RS10720;Name=CYJ01_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10720;old_locus_tag=CYJ01_10720 NZ_PJUR01000038.1 Protein Homology CDS 66 947 . + 0 ID=cds-WP_037542368.1;Parent=gene-CYJ01_RS10720;Dbxref=GenBank:WP_037542368.1;Name=WP_037542368.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167145.1;locus_tag=CYJ01_RS10720;product=LysR family transcriptional regulator;protein_id=WP_037542368.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 1136 2020 . - . ID=gene-CYJ01_RS10725;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10725;old_locus_tag=CYJ01_10725 NZ_PJUR01000038.1 Protein Homology CDS 1136 2020 . - 0 ID=cds-WP_015729563.1;Parent=gene-CYJ01_RS10725;Dbxref=GenBank:WP_015729563.1;Name=WP_015729563.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167144.1;locus_tag=CYJ01_RS10725;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_015729563.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 2426 3355 . + . ID=gene-CYJ01_RS10730;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CYJ01_RS10730;old_locus_tag=CYJ01_10730 NZ_PJUR01000038.1 Protein Homology CDS 2426 3355 . + 0 ID=cds-WP_014613127.1;Parent=gene-CYJ01_RS10730;Dbxref=GenBank:WP_014613127.1;Name=WP_014613127.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=CYJ01_RS10730;product=formimidoylglutamase;protein_id=WP_014613127.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 3465 4160 . - . ID=gene-CYJ01_RS10735;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CYJ01_RS10735;old_locus_tag=CYJ01_10735 NZ_PJUR01000038.1 Protein Homology CDS 3465 4160 . - 0 ID=cds-WP_014613126.1;Parent=gene-CYJ01_RS10735;Dbxref=GenBank:WP_014613126.1;Name=WP_014613126.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=CYJ01_RS10735;product=ribose 5-phosphate isomerase A;protein_id=WP_014613126.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 4286 4945 . + . ID=gene-CYJ01_RS10740;Name=CYJ01_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10740;old_locus_tag=CYJ01_10740 NZ_PJUR01000038.1 Protein Homology CDS 4286 4945 . + 0 ID=cds-WP_014613125.1;Parent=gene-CYJ01_RS10740;Dbxref=GenBank:WP_014613125.1;Name=WP_014613125.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613125.1;locus_tag=CYJ01_RS10740;product=MOSC domain-containing protein;protein_id=WP_014613125.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 5017 6042 . - . ID=gene-CYJ01_RS10745;Name=CYJ01_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10745;old_locus_tag=CYJ01_10745 NZ_PJUR01000038.1 Protein Homology CDS 5017 6042 . - 0 ID=cds-WP_014613124.1;Parent=gene-CYJ01_RS10745;Dbxref=GenBank:WP_014613124.1;Name=WP_014613124.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613124.1;locus_tag=CYJ01_RS10745;product=aldose epimerase family protein;protein_id=WP_014613124.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 6077 6409 . - . ID=gene-CYJ01_RS10750;Name=CYJ01_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10750;old_locus_tag=CYJ01_10750 NZ_PJUR01000038.1 Protein Homology CDS 6077 6409 . - 0 ID=cds-WP_015729565.1;Parent=gene-CYJ01_RS10750;Dbxref=GenBank:WP_015729565.1;Name=WP_015729565.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=CYJ01_RS10750;product=YnfA family protein;protein_id=WP_015729565.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 6562 7806 . - . ID=gene-CYJ01_RS10755;Name=CYJ01_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10755;old_locus_tag=CYJ01_10755 NZ_PJUR01000038.1 Protein Homology CDS 6562 7806 . - 0 ID=cds-WP_014613122.1;Parent=gene-CYJ01_RS10755;Dbxref=GenBank:WP_014613122.1;Name=WP_014613122.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=CYJ01_RS10755;product=ABC transporter permease;protein_id=WP_014613122.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 7808 8698 . - . ID=gene-CYJ01_RS10760;Name=CYJ01_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10760;old_locus_tag=CYJ01_10760 NZ_PJUR01000038.1 Protein Homology CDS 7808 8698 . - 0 ID=cds-WP_014613121.1;Parent=gene-CYJ01_RS10760;Dbxref=GenBank:WP_014613121.1;Name=WP_014613121.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613121.1;locus_tag=CYJ01_RS10760;product=ABC transporter ATP-binding protein;protein_id=WP_014613121.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 8957 9643 . - . ID=gene-CYJ01_RS10765;Name=CYJ01_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10765;old_locus_tag=CYJ01_10765 NZ_PJUR01000038.1 Protein Homology CDS 8957 9643 . - 0 ID=cds-WP_101457548.1;Parent=gene-CYJ01_RS10765;Dbxref=GenBank:WP_101457548.1;Name=WP_101457548.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613120.1;locus_tag=CYJ01_RS10765;product=DUF805 domain-containing protein;protein_id=WP_101457548.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 9823 10431 . + . ID=gene-CYJ01_RS10770;Name=CYJ01_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10770;old_locus_tag=CYJ01_10770 NZ_PJUR01000038.1 Protein Homology CDS 9823 10431 . + 0 ID=cds-WP_101457549.1;Parent=gene-CYJ01_RS10770;Dbxref=GenBank:WP_101457549.1;Name=WP_101457549.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613119.1;locus_tag=CYJ01_RS10770;product=DNA-3-methyladenine glycosylase;protein_id=WP_101457549.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 10512 11846 . - . ID=gene-CYJ01_RS10775;Name=CYJ01_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10775;old_locus_tag=CYJ01_10775 NZ_PJUR01000038.1 Protein Homology CDS 10512 11846 . - 0 ID=cds-WP_014613118.1;Parent=gene-CYJ01_RS10775;Dbxref=GenBank:WP_014613118.1;Name=WP_014613118.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613118.1;locus_tag=CYJ01_RS10775;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_014613118.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 12018 12833 . - . ID=gene-CYJ01_RS10780;Name=CYJ01_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10780;old_locus_tag=CYJ01_10780 NZ_PJUR01000038.1 Protein Homology CDS 12018 12833 . - 0 ID=cds-WP_101457550.1;Parent=gene-CYJ01_RS10780;Dbxref=GenBank:WP_101457550.1;Name=WP_101457550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729569.1;locus_tag=CYJ01_RS10780;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_101457550.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 12830 13387 . - . ID=gene-CYJ01_RS10785;Name=CYJ01_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10785;old_locus_tag=CYJ01_10785 NZ_PJUR01000038.1 Protein Homology CDS 12830 13387 . - 0 ID=cds-WP_101457551.1;Parent=gene-CYJ01_RS10785;Dbxref=GenBank:WP_101457551.1;Name=WP_101457551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167131.1;locus_tag=CYJ01_RS10785;product=HAAS signaling domain-containing protein;protein_id=WP_101457551.1;transl_table=11 NZ_PJUR01000038.1 RefSeq gene 13384 13704 . - . ID=gene-CYJ01_RS10790;Name=CYJ01_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10790;old_locus_tag=CYJ01_10790 NZ_PJUR01000038.1 Protein Homology CDS 13384 13704 . - 0 ID=cds-WP_014613115.1;Parent=gene-CYJ01_RS10790;Dbxref=GenBank:WP_014613115.1;Name=WP_014613115.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=CYJ01_RS10790;product=PadR family transcriptional regulator;protein_id=WP_014613115.1;transl_table=11 ##sequence-region NZ_PJUR01000039.1 1 2156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000039.1 RefSeq region 1 2156 . + . ID=NZ_PJUR01000039.1:1..2156;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000039.1 RefSeq gene 1 1778 . + . ID=gene-CYJ01_RS12160;Name=CYJ01_RS12160;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS12160;partial=true;start_range=.,1 NZ_PJUR01000039.1 cmsearch rRNA 1 1778 . + . ID=rna-CYJ01_RS12160;Parent=gene-CYJ01_RS12160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS12160;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUR01000039.1 cmsearch exon 1 1778 . + . ID=exon-CYJ01_RS12160-1;Parent=rna-CYJ01_RS12160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS12160;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUR01000039.1 RefSeq gene 1857 1971 . + . ID=gene-CYJ01_RS10795;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ01_RS10795;old_locus_tag=CYJ01_10800 NZ_PJUR01000039.1 cmsearch rRNA 1857 1971 . + . ID=rna-CYJ01_RS10795;Parent=gene-CYJ01_RS10795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS10795;product=5S ribosomal RNA NZ_PJUR01000039.1 cmsearch exon 1857 1971 . + . ID=exon-CYJ01_RS10795-1;Parent=rna-CYJ01_RS10795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS10795;product=5S ribosomal RNA ##sequence-region NZ_PJUR01000004.1 1 121907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000004.1 RefSeq region 1 121907 . + . ID=NZ_PJUR01000004.1:1..121907;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000004.1 RefSeq gene 575 2527 . - . ID=gene-CYJ01_RS02110;Name=spsN;gbkey=Gene;gene=spsN;gene_biotype=protein_coding;locus_tag=CYJ01_RS02110;old_locus_tag=CYJ01_02110 NZ_PJUR01000004.1 Protein Homology CDS 575 2527 . - 0 ID=cds-WP_020220137.1;Parent=gene-CYJ01_RS02110;Dbxref=GenBank:WP_020220137.1;Name=WP_020220137.1;gbkey=CDS;gene=spsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614888.1;locus_tag=CYJ01_RS02110;product=LPXTG-anchored surface protein SpsN;protein_id=WP_020220137.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 3542 4372 . + . ID=gene-CYJ01_RS02115;Name=CYJ01_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02115;old_locus_tag=CYJ01_02115 NZ_PJUR01000004.1 Protein Homology CDS 3542 4372 . + 0 ID=cds-WP_101457185.1;Parent=gene-CYJ01_RS02115;Dbxref=GenBank:WP_101457185.1;Name=WP_101457185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614889.1;locus_tag=CYJ01_RS02115;product=thermonuclease family protein;protein_id=WP_101457185.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 4793 5707 . + . ID=gene-CYJ01_RS02120;Name=CYJ01_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02120;old_locus_tag=CYJ01_02120 NZ_PJUR01000004.1 Protein Homology CDS 4793 5707 . + 0 ID=cds-WP_014614890.1;Parent=gene-CYJ01_RS02120;Dbxref=GenBank:WP_014614890.1;Name=WP_014614890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614890.1;locus_tag=CYJ01_RS02120;product=TDT family transporter;protein_id=WP_014614890.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 6115 6633 . - . ID=gene-CYJ01_RS12395;Name=CYJ01_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12395;old_locus_tag=CYJ01_02125 NZ_PJUR01000004.1 Protein Homology CDS 6115 6633 . - 0 ID=cds-WP_157929449.1;Parent=gene-CYJ01_RS12395;Dbxref=GenBank:WP_157929449.1;Name=WP_157929449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ01_RS12395;product=Abi family protein;protein_id=WP_157929449.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 6642 6965 . - . ID=gene-CYJ01_RS12400;Name=CYJ01_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12400;old_locus_tag=CYJ01_02130 NZ_PJUR01000004.1 Protein Homology CDS 6642 6965 . - 0 ID=cds-WP_157929450.1;Parent=gene-CYJ01_RS12400;Dbxref=GenBank:WP_157929450.1;Name=WP_157929450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ01_RS12400;product=Abi family protein;protein_id=WP_157929450.1;transl_table=11 NZ_PJUR01000004.1 RefSeq pseudogene 7537 7680 . + . ID=gene-CYJ01_RS12215;Name=CYJ01_RS12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12215;old_locus_tag=CYJ01_02135;partial=true;pseudo=true;start_range=.,7537 NZ_PJUR01000004.1 Protein Homology CDS 7537 7680 . + 0 ID=cds-CYJ01_RS12215;Parent=gene-CYJ01_RS12215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ01_RS12215;partial=true;product=site-specific integrase;pseudo=true;start_range=.,7537;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 7763 9304 . - . ID=gene-CYJ01_RS02140;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02140;old_locus_tag=CYJ01_02140 NZ_PJUR01000004.1 Protein Homology CDS 7763 9304 . - 0 ID=cds-WP_014614896.1;Parent=gene-CYJ01_RS02140;Dbxref=GenBank:WP_014614896.1;Name=WP_014614896.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ01_RS02140;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_014614896.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 9327 10793 . - . ID=gene-CYJ01_RS02145;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02145;old_locus_tag=CYJ01_02145 NZ_PJUR01000004.1 Protein Homology CDS 9327 10793 . - 0 ID=cds-WP_014614897.1;Parent=gene-CYJ01_RS02145;Dbxref=GenBank:WP_014614897.1;Name=WP_014614897.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CYJ01_RS02145;product=IMP dehydrogenase;protein_id=WP_014614897.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 10831 12099 . - . ID=gene-CYJ01_RS02150;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=CYJ01_RS02150;old_locus_tag=CYJ01_02150 NZ_PJUR01000004.1 Protein Homology CDS 10831 12099 . - 0 ID=cds-WP_101457187.1;Parent=gene-CYJ01_RS02150;Dbxref=GenBank:WP_101457187.1;Name=WP_101457187.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CYJ01_RS02150;product=xanthine permease PbuX;protein_id=WP_101457187.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 12096 12680 . - . ID=gene-CYJ01_RS02155;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CYJ01_RS02155;old_locus_tag=CYJ01_02155 NZ_PJUR01000004.1 Protein Homology CDS 12096 12680 . - 0 ID=cds-WP_014614899.1;Parent=gene-CYJ01_RS02155;Dbxref=GenBank:WP_014614899.1;Name=WP_014614899.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166944.1;locus_tag=CYJ01_RS02155;product=xanthine phosphoribosyltransferase;protein_id=WP_014614899.1;transl_table=11 NZ_PJUR01000004.1 cmsearch riboswitch 12864 12966 . - . ID=id-NZ_PJUR01000004.1:12864..12966;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000004.1 RefSeq gene 13141 13563 . + . ID=gene-CYJ01_RS02160;Name=CYJ01_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02160;old_locus_tag=CYJ01_02160 NZ_PJUR01000004.1 Protein Homology CDS 13141 13563 . + 0 ID=cds-WP_014614900.1;Parent=gene-CYJ01_RS02160;Dbxref=GenBank:WP_014614900.1;Name=WP_014614900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=CYJ01_RS02160;product=general stress protein;protein_id=WP_014614900.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 13759 14433 . + . ID=gene-CYJ01_RS02165;Name=CYJ01_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02165;old_locus_tag=CYJ01_02165 NZ_PJUR01000004.1 Protein Homology CDS 13759 14433 . + 0 ID=cds-WP_015728533.1;Parent=gene-CYJ01_RS02165;Dbxref=GenBank:WP_015728533.1;Name=WP_015728533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=CYJ01_RS02165;product=hypothetical protein;protein_id=WP_015728533.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 14547 15146 . + . ID=gene-CYJ01_RS02170;Name=CYJ01_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02170;old_locus_tag=CYJ01_02170 NZ_PJUR01000004.1 Protein Homology CDS 14547 15146 . + 0 ID=cds-WP_014614902.1;Parent=gene-CYJ01_RS02170;Dbxref=GenBank:WP_014614902.1;Name=WP_014614902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=CYJ01_RS02170;product=hypothetical protein;protein_id=WP_014614902.1;transl_table=11 NZ_PJUR01000004.1 cmsearch riboswitch 15227 15329 . + . ID=id-NZ_PJUR01000004.1:15227..15329;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000004.1 RefSeq gene 15420 16526 . + . ID=gene-CYJ01_RS02175;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CYJ01_RS02175;old_locus_tag=CYJ01_02175 NZ_PJUR01000004.1 Protein Homology CDS 15420 16526 . + 0 ID=cds-WP_015728532.1;Parent=gene-CYJ01_RS02175;Dbxref=GenBank:WP_015728532.1;Name=WP_015728532.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=CYJ01_RS02175;product=glycine oxidase ThiO;protein_id=WP_015728532.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 16601 17992 . + . ID=gene-CYJ01_RS02180;Name=CYJ01_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02180;old_locus_tag=CYJ01_02180 NZ_PJUR01000004.1 Protein Homology CDS 16601 17992 . + 0 ID=cds-WP_015728531.1;Parent=gene-CYJ01_RS02180;Dbxref=GenBank:WP_015728531.1;Name=WP_015728531.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=CYJ01_RS02180;product=L-cystine transporter;protein_id=WP_015728531.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 18425 19081 . - . ID=gene-CYJ01_RS02185;Name=CYJ01_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02185;old_locus_tag=CYJ01_02185 NZ_PJUR01000004.1 Protein Homology CDS 18425 19081 . - 0 ID=cds-WP_037541928.1;Parent=gene-CYJ01_RS02185;Dbxref=GenBank:WP_037541928.1;Name=WP_037541928.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571171.1;locus_tag=CYJ01_RS02185;product=ATP-binding cassette domain-containing protein;protein_id=WP_037541928.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 19078 19407 . - . ID=gene-CYJ01_RS02190;Name=CYJ01_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02190;old_locus_tag=CYJ01_02190 NZ_PJUR01000004.1 Protein Homology CDS 19078 19407 . - 0 ID=cds-WP_037541929.1;Parent=gene-CYJ01_RS02190;Dbxref=GenBank:WP_037541929.1;Name=WP_037541929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463765.1;locus_tag=CYJ01_RS02190;product=YxeA family protein;protein_id=WP_037541929.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 19411 21378 . - . ID=gene-CYJ01_RS02195;Name=CYJ01_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02195;old_locus_tag=CYJ01_02195 NZ_PJUR01000004.1 Protein Homology CDS 19411 21378 . - 0 ID=cds-WP_101457188.1;Parent=gene-CYJ01_RS02195;Dbxref=GenBank:WP_101457188.1;Name=WP_101457188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614907.1;locus_tag=CYJ01_RS02195;product=DUF1430 domain-containing protein;protein_id=WP_101457188.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 21404 21715 . - . ID=gene-CYJ01_RS02200;Name=CYJ01_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02200;old_locus_tag=CYJ01_02200 NZ_PJUR01000004.1 Protein Homology CDS 21404 21715 . - 0 ID=cds-WP_341458022.1;Parent=gene-CYJ01_RS02200;Dbxref=GenBank:WP_341458022.1;Name=WP_341458022.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01653.1;locus_tag=CYJ01_RS02200;product=lactococcin 972 family bacteriocin;protein_id=WP_341458022.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 22467 23222 . - . ID=gene-CYJ01_RS02205;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02205;old_locus_tag=CYJ01_02205 NZ_PJUR01000004.1 Protein Homology CDS 22467 23222 . - 0 ID=cds-WP_101457190.1;Parent=gene-CYJ01_RS02205;Dbxref=GenBank:WP_101457190.1;Name=WP_101457190.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276836.1;locus_tag=CYJ01_RS02205;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_101457190.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 23775 24344 . + . ID=gene-CYJ01_RS02210;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02210;old_locus_tag=CYJ01_02210 NZ_PJUR01000004.1 Protein Homology CDS 23775 24344 . + 0 ID=cds-WP_014614909.1;Parent=gene-CYJ01_RS02210;Dbxref=GenBank:WP_014614909.1;Name=WP_014614909.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CYJ01_RS02210;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_014614909.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 24359 25882 . + . ID=gene-CYJ01_RS02215;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CYJ01_RS02215;old_locus_tag=CYJ01_02215 NZ_PJUR01000004.1 Protein Homology CDS 24359 25882 . + 0 ID=cds-WP_015728526.1;Parent=gene-CYJ01_RS02215;Dbxref=GenBank:WP_015728526.1;Name=WP_015728526.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451490.1;locus_tag=CYJ01_RS02215;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_015728526.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 26083 27024 . - . ID=gene-CYJ01_RS02220;Name=CYJ01_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02220;old_locus_tag=CYJ01_02220 NZ_PJUR01000004.1 Protein Homology CDS 26083 27024 . - 0 ID=cds-WP_101457191.1;Parent=gene-CYJ01_RS02220;Dbxref=GenBank:WP_101457191.1;Name=WP_101457191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=CYJ01_RS02220;product=DUF1002 domain-containing protein;protein_id=WP_101457191.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 27142 28131 . - . ID=gene-CYJ01_RS02225;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02225;old_locus_tag=CYJ01_02225 NZ_PJUR01000004.1 Protein Homology CDS 27142 28131 . - 0 ID=cds-WP_101457192.1;Parent=gene-CYJ01_RS02225;Dbxref=GenBank:WP_101457192.1;Name=WP_101457192.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=CYJ01_RS02225;product=biotin synthase BioB;protein_id=WP_101457192.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 28337 28714 . + . ID=gene-CYJ01_RS02230;Name=CYJ01_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02230;old_locus_tag=CYJ01_02230 NZ_PJUR01000004.1 Protein Homology CDS 28337 28714 . + 0 ID=cds-WP_063279066.1;Parent=gene-CYJ01_RS02230;Dbxref=GenBank:WP_063279066.1;Name=WP_063279066.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=CYJ01_RS02230;product=iron chaperone;protein_id=WP_063279066.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 29031 30056 . + . ID=gene-CYJ01_RS02235;Name=CYJ01_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02235;old_locus_tag=CYJ01_02235 NZ_PJUR01000004.1 Protein Homology CDS 29031 30056 . + 0 ID=cds-WP_101457193.1;Parent=gene-CYJ01_RS02235;Dbxref=GenBank:WP_101457193.1;Name=WP_101457193.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166961.1;locus_tag=CYJ01_RS02235;product=methionine ABC transporter ATP-binding protein;protein_id=WP_101457193.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 30050 30709 . + . ID=gene-CYJ01_RS02240;Name=CYJ01_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02240;old_locus_tag=CYJ01_02240 NZ_PJUR01000004.1 Protein Homology CDS 30050 30709 . + 0 ID=cds-WP_063279068.1;Parent=gene-CYJ01_RS02240;Dbxref=GenBank:WP_063279068.1;Name=WP_063279068.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CYJ01_RS02240;product=methionine ABC transporter permease;protein_id=WP_063279068.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 30725 31564 . + . ID=gene-CYJ01_RS02245;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02245;old_locus_tag=CYJ01_02245 NZ_PJUR01000004.1 Protein Homology CDS 30725 31564 . + 0 ID=cds-WP_014614916.1;Parent=gene-CYJ01_RS02245;Dbxref=GenBank:WP_014614916.1;Name=WP_014614916.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425688.1;locus_tag=CYJ01_RS02245;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_014614916.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 31722 32717 . - . ID=gene-CYJ01_RS02250;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CYJ01_RS02250;old_locus_tag=CYJ01_02250 NZ_PJUR01000004.1 Protein Homology CDS 31722 32717 . - 0 ID=cds-WP_101457194.1;Parent=gene-CYJ01_RS02250;Dbxref=GenBank:WP_101457194.1;Name=WP_101457194.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728522.1;locus_tag=CYJ01_RS02250;product=adenosine deaminase;protein_id=WP_101457194.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 33110 35101 . + . ID=gene-CYJ01_RS02255;Name=CYJ01_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02255;old_locus_tag=CYJ01_02255 NZ_PJUR01000004.1 Protein Homology CDS 33110 35101 . + 0 ID=cds-WP_101457195.1;Parent=gene-CYJ01_RS02255;Dbxref=GenBank:WP_101457195.1;Name=WP_101457195.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=CYJ01_RS02255;product=catalase;protein_id=WP_101457195.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 35167 36276 . - . ID=gene-CYJ01_RS02260;Name=CYJ01_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02260;old_locus_tag=CYJ01_02260 NZ_PJUR01000004.1 Protein Homology CDS 35167 36276 . - 0 ID=cds-WP_063278725.1;Parent=gene-CYJ01_RS02260;Dbxref=GenBank:WP_063278725.1;Name=WP_063278725.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009362017.1;locus_tag=CYJ01_RS02260;product=ABC transporter ATP-binding protein;protein_id=WP_063278725.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 36395 37516 . - . ID=gene-CYJ01_RS02265;Name=CYJ01_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02265;old_locus_tag=CYJ01_02265 NZ_PJUR01000004.1 Protein Homology CDS 36395 37516 . - 0 ID=cds-WP_063278724.1;Parent=gene-CYJ01_RS02265;Dbxref=GenBank:WP_063278724.1;Name=WP_063278724.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000408.1;locus_tag=CYJ01_RS02265;product=Gfo/Idh/MocA family protein;protein_id=WP_063278724.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 37531 38358 . - . ID=gene-CYJ01_RS02270;Name=CYJ01_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02270;old_locus_tag=CYJ01_02270 NZ_PJUR01000004.1 Protein Homology CDS 37531 38358 . - 0 ID=cds-WP_063278723.1;Parent=gene-CYJ01_RS02270;Dbxref=GenBank:WP_063278723.1;Name=WP_063278723.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000409.1;locus_tag=CYJ01_RS02270;product=carbohydrate ABC transporter permease;protein_id=WP_063278723.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 38360 39259 . - . ID=gene-CYJ01_RS02275;Name=CYJ01_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02275;old_locus_tag=CYJ01_02275 NZ_PJUR01000004.1 Protein Homology CDS 38360 39259 . - 0 ID=cds-WP_063278722.1;Parent=gene-CYJ01_RS02275;Dbxref=GenBank:WP_063278722.1;Name=WP_063278722.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=CYJ01_RS02275;product=carbohydrate ABC transporter permease;protein_id=WP_063278722.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 39269 40594 . - . ID=gene-CYJ01_RS02280;Name=CYJ01_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02280;old_locus_tag=CYJ01_02280 NZ_PJUR01000004.1 Protein Homology CDS 39269 40594 . - 0 ID=cds-WP_063278721.1;Parent=gene-CYJ01_RS02280;Dbxref=GenBank:WP_063278721.1;Name=WP_063278721.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000410.1;locus_tag=CYJ01_RS02280;product=ABC transporter substrate-binding protein;protein_id=WP_063278721.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 40698 41528 . - . ID=gene-CYJ01_RS02285;Name=CYJ01_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02285;old_locus_tag=CYJ01_02285 NZ_PJUR01000004.1 Protein Homology CDS 40698 41528 . - 0 ID=cds-WP_181022581.1;Parent=gene-CYJ01_RS02285;Dbxref=GenBank:WP_181022581.1;Name=WP_181022581.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=CYJ01_RS02285;product=helix-turn-helix domain-containing protein;protein_id=WP_181022581.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 41726 41968 . - . ID=gene-CYJ01_RS02290;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CYJ01_RS02290;old_locus_tag=CYJ01_02290 NZ_PJUR01000004.1 Protein Homology CDS 41726 41968 . - 0 ID=cds-WP_014614919.1;Parent=gene-CYJ01_RS02290;Dbxref=GenBank:WP_014614919.1;Name=WP_014614919.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=CYJ01_RS02290;product=30S ribosomal protein S18;protein_id=WP_014614919.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 42022 42528 . - . ID=gene-CYJ01_RS02295;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CYJ01_RS02295;old_locus_tag=CYJ01_02295 NZ_PJUR01000004.1 Protein Homology CDS 42022 42528 . - 0 ID=cds-WP_014614920.1;Parent=gene-CYJ01_RS02295;Dbxref=GenBank:WP_014614920.1;Name=WP_014614920.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=CYJ01_RS02295;product=single-stranded DNA-binding protein;protein_id=WP_014614920.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 42551 42847 . - . ID=gene-CYJ01_RS02300;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CYJ01_RS02300;old_locus_tag=CYJ01_02300 NZ_PJUR01000004.1 Protein Homology CDS 42551 42847 . - 0 ID=cds-WP_014614921.1;Parent=gene-CYJ01_RS02300;Dbxref=GenBank:WP_014614921.1;Name=WP_014614921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=CYJ01_RS02300;product=30S ribosomal protein S6;protein_id=WP_014614921.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 43184 44710 . + . ID=gene-CYJ01_RS02305;Name=sbi;gbkey=Gene;gene=sbi;gene_biotype=protein_coding;gene_synonym=spsK;locus_tag=CYJ01_RS02305;old_locus_tag=CYJ01_02305 NZ_PJUR01000004.1 Protein Homology CDS 43184 44710 . + 0 ID=cds-WP_015728518.1;Parent=gene-CYJ01_RS02305;Dbxref=GenBank:WP_015728518.1;Name=WP_015728518.1;gbkey=CDS;gene=sbi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728518.1;locus_tag=CYJ01_RS02305;product=Ig-binding surface protein Sbi/SpsK;protein_id=WP_015728518.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 44764 45573 . - . ID=gene-CYJ01_RS02310;Name=CYJ01_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02310;old_locus_tag=CYJ01_02310 NZ_PJUR01000004.1 Protein Homology CDS 44764 45573 . - 0 ID=cds-WP_037541946.1;Parent=gene-CYJ01_RS02310;Dbxref=GenBank:WP_037541946.1;Name=WP_037541946.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220246.1;locus_tag=CYJ01_RS02310;product=ABC transporter permease subunit;protein_id=WP_037541946.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 45566 46501 . - . ID=gene-CYJ01_RS02315;Name=CYJ01_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02315;old_locus_tag=CYJ01_02315 NZ_PJUR01000004.1 Protein Homology CDS 45566 46501 . - 0 ID=cds-WP_096636734.1;Parent=gene-CYJ01_RS02315;Dbxref=GenBank:WP_096636734.1;Name=WP_096636734.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614924.1;locus_tag=CYJ01_RS02315;product=ABC transporter ATP-binding protein;protein_id=WP_096636734.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 47740 47919 . + . ID=gene-CYJ01_RS11925;Name=CYJ01_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11925 NZ_PJUR01000004.1 GeneMarkS-2+ CDS 47740 47919 . + 0 ID=cds-WP_101458530.1;Parent=gene-CYJ01_RS11925;Dbxref=GenBank:WP_101458530.1;Name=WP_101458530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11925;product=hypothetical protein;protein_id=WP_101458530.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 47921 48343 . + . ID=gene-CYJ01_RS02320;Name=CYJ01_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02320;old_locus_tag=CYJ01_02320 NZ_PJUR01000004.1 Protein Homology CDS 47921 48343 . + 0 ID=cds-WP_065354658.1;Parent=gene-CYJ01_RS02320;Dbxref=GenBank:WP_065354658.1;Name=WP_065354658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614928.1;locus_tag=CYJ01_RS02320;product=hypothetical protein;protein_id=WP_065354658.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 49099 50196 . - . ID=gene-CYJ01_RS02325;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CYJ01_RS02325;old_locus_tag=CYJ01_02325 NZ_PJUR01000004.1 Protein Homology CDS 49099 50196 . - 0 ID=cds-WP_014614930.1;Parent=gene-CYJ01_RS02325;Dbxref=GenBank:WP_014614930.1;Name=WP_014614930.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CYJ01_RS02325;product=redox-regulated ATPase YchF;protein_id=WP_014614930.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 50187 50408 . - . ID=gene-CYJ01_RS02330;Name=CYJ01_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02330;old_locus_tag=CYJ01_02330 NZ_PJUR01000004.1 Protein Homology CDS 50187 50408 . - 0 ID=cds-WP_014614931.1;Parent=gene-CYJ01_RS02330;Dbxref=GenBank:WP_014614931.1;Name=WP_014614931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614931.1;locus_tag=CYJ01_RS02330;product=DUF951 domain-containing protein;protein_id=WP_014614931.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 50421 51311 . - . ID=gene-CYJ01_RS02335;Name=CYJ01_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02335;old_locus_tag=CYJ01_02335 NZ_PJUR01000004.1 Protein Homology CDS 50421 51311 . - 0 ID=cds-WP_014614932.1;Parent=gene-CYJ01_RS02335;Dbxref=GenBank:WP_014614932.1;Name=WP_014614932.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169154.1;locus_tag=CYJ01_RS02335;product=mechanosensitive ion channel family protein;protein_id=WP_014614932.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 51377 52201 . - . ID=gene-CYJ01_RS02340;Name=CYJ01_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02340;old_locus_tag=CYJ01_02340 NZ_PJUR01000004.1 Protein Homology CDS 51377 52201 . - 0 ID=cds-WP_172968890.1;Parent=gene-CYJ01_RS02340;Dbxref=GenBank:WP_172968890.1;Name=WP_172968890.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169155.1;locus_tag=CYJ01_RS02340;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_172968890.1;transl_table=11 NZ_PJUR01000004.1 cmsearch binding_site 52387 52701 . + . ID=id-NZ_PJUR01000004.1:52387..52701;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUR01000004.1 RefSeq gene 52766 53878 . + . ID=gene-CYJ01_RS02345;Name=CYJ01_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02345;old_locus_tag=CYJ01_02345 NZ_PJUR01000004.1 Protein Homology CDS 52766 53878 . + 0 ID=cds-WP_063278716.1;Parent=gene-CYJ01_RS02345;Dbxref=GenBank:WP_063278716.1;Name=WP_063278716.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220248.1;locus_tag=CYJ01_RS02345;product=PLP-dependent transferase;protein_id=WP_063278716.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 53865 55040 . + . ID=gene-CYJ01_RS02350;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02350;old_locus_tag=CYJ01_02350 NZ_PJUR01000004.1 Protein Homology CDS 53865 55040 . + 0 ID=cds-WP_101457197.1;Parent=gene-CYJ01_RS02350;Dbxref=GenBank:WP_101457197.1;Name=WP_101457197.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728512.1;locus_tag=CYJ01_RS02350;product=cystathionine beta-lyase MetC;protein_id=WP_101457197.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 54994 56835 . + . ID=gene-CYJ01_RS02355;Name=CYJ01_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02355;old_locus_tag=CYJ01_02355 NZ_PJUR01000004.1 Protein Homology CDS 54994 56835 . + 0 ID=cds-WP_014614936.1;Parent=gene-CYJ01_RS02355;Dbxref=GenBank:WP_014614936.1;Name=WP_014614936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=CYJ01_RS02355;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_014614936.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 56829 59072 . + . ID=gene-CYJ01_RS02360;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CYJ01_RS02360;old_locus_tag=CYJ01_02360 NZ_PJUR01000004.1 Protein Homology CDS 56829 59072 . + 0 ID=cds-WP_101457198.1;Parent=gene-CYJ01_RS02360;Dbxref=GenBank:WP_101457198.1;Name=WP_101457198.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166028.1;locus_tag=CYJ01_RS02360;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_101457198.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 59630 60535 . - . ID=gene-CYJ01_RS02365;Name=CYJ01_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02365;old_locus_tag=CYJ01_02365 NZ_PJUR01000004.1 Protein Homology CDS 59630 60535 . - 0 ID=cds-WP_014613300.1;Parent=gene-CYJ01_RS02365;Dbxref=GenBank:WP_014613300.1;Name=WP_014613300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169555.1;locus_tag=CYJ01_RS02365;product=lytic transglycosylase;protein_id=WP_014613300.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 60721 61425 . + . ID=gene-CYJ01_RS02370;Name=CYJ01_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02370;old_locus_tag=CYJ01_02370 NZ_PJUR01000004.1 Protein Homology CDS 60721 61425 . + 0 ID=cds-WP_014613301.1;Parent=gene-CYJ01_RS02370;Dbxref=GenBank:WP_014613301.1;Name=WP_014613301.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169556.1;locus_tag=CYJ01_RS02370;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613301.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 61832 62770 . + . ID=gene-CYJ01_RS02375;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02375;old_locus_tag=CYJ01_02375 NZ_PJUR01000004.1 Protein Homology CDS 61832 62770 . + 0 ID=cds-WP_014613302.1;Parent=gene-CYJ01_RS02375;Dbxref=GenBank:WP_014613302.1;Name=WP_014613302.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=CYJ01_RS02375;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_014613302.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 62787 63023 . + . ID=gene-CYJ01_RS02380;Name=CYJ01_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02380;old_locus_tag=CYJ01_02380 NZ_PJUR01000004.1 Protein Homology CDS 62787 63023 . + 0 ID=cds-WP_014613303.1;Parent=gene-CYJ01_RS02380;Dbxref=GenBank:WP_014613303.1;Name=WP_014613303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729458.1;locus_tag=CYJ01_RS02380;product=hypothetical protein;protein_id=WP_014613303.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 63100 64464 . + . ID=gene-CYJ01_RS02385;Name=CYJ01_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02385;old_locus_tag=CYJ01_02385 NZ_PJUR01000004.1 Protein Homology CDS 63100 64464 . + 0 ID=cds-WP_014613304.1;Parent=gene-CYJ01_RS02385;Dbxref=GenBank:WP_014613304.1;Name=WP_014613304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=CYJ01_RS02385;product=EVE domain-containing protein;protein_id=WP_014613304.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 65194 66624 . + . ID=gene-CYJ01_RS02395;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02395;old_locus_tag=CYJ01_02395 NZ_PJUR01000004.1 Protein Homology CDS 65194 66624 . + 0 ID=cds-WP_099987232.1;Parent=gene-CYJ01_RS02395;Dbxref=GenBank:WP_099987232.1;Name=WP_099987232.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613305.1;locus_tag=CYJ01_RS02395;product=Na+/H+ antiporter NhaC;protein_id=WP_099987232.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 66689 67093 . + . ID=gene-CYJ01_RS02400;Name=CYJ01_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02400;old_locus_tag=CYJ01_02400 NZ_PJUR01000004.1 Protein Homology CDS 66689 67093 . + 0 ID=cds-WP_101457199.1;Parent=gene-CYJ01_RS02400;Dbxref=GenBank:WP_101457199.1;Name=WP_101457199.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165774.1;locus_tag=CYJ01_RS02400;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_101457199.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 67323 68033 . - . ID=gene-CYJ01_RS02405;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02405;old_locus_tag=CYJ01_02405 NZ_PJUR01000004.1 Protein Homology CDS 67323 68033 . - 0 ID=cds-WP_015729454.1;Parent=gene-CYJ01_RS02405;Dbxref=GenBank:WP_015729454.1;Name=WP_015729454.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CYJ01_RS02405;product=purine-nucleoside phosphorylase;protein_id=WP_015729454.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 68249 69550 . + . ID=gene-CYJ01_RS02410;Name=CYJ01_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02410;old_locus_tag=CYJ01_02410 NZ_PJUR01000004.1 Protein Homology CDS 68249 69550 . + 0 ID=cds-WP_014613308.1;Parent=gene-CYJ01_RS02410;Dbxref=GenBank:WP_014613308.1;Name=WP_014613308.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=CYJ01_RS02410;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_014613308.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 69562 69915 . + . ID=gene-CYJ01_RS02415;Name=CYJ01_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02415;old_locus_tag=CYJ01_02415 NZ_PJUR01000004.1 Protein Homology CDS 69562 69915 . + 0 ID=cds-WP_014613309.1;Parent=gene-CYJ01_RS02415;Dbxref=GenBank:WP_014613309.1;Name=WP_014613309.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=CYJ01_RS02415;product=DoxX family protein;protein_id=WP_014613309.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 69978 70448 . - . ID=gene-CYJ01_RS02420;Name=CYJ01_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02420;old_locus_tag=CYJ01_02420 NZ_PJUR01000004.1 Protein Homology CDS 69978 70448 . - 0 ID=cds-WP_014613310.1;Parent=gene-CYJ01_RS02420;Dbxref=GenBank:WP_014613310.1;Name=WP_014613310.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CYJ01_RS02420;product=S-ribosylhomocysteine lyase;protein_id=WP_014613310.1;transl_table=11 NZ_PJUR01000004.1 cmsearch riboswitch 70744 70849 . + . ID=id-NZ_PJUR01000004.1:70744..70849;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000004.1 RefSeq gene 71014 72132 . + . ID=gene-CYJ01_RS02425;Name=CYJ01_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02425;old_locus_tag=CYJ01_02425 NZ_PJUR01000004.1 Protein Homology CDS 71014 72132 . + 0 ID=cds-WP_051144746.1;Parent=gene-CYJ01_RS02425;Dbxref=GenBank:WP_051144746.1;Name=WP_051144746.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169567.1;locus_tag=CYJ01_RS02425;product=M20 family metallopeptidase;protein_id=WP_051144746.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 72135 73325 . + . ID=gene-CYJ01_RS02430;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=CYJ01_RS02430;old_locus_tag=CYJ01_02430 NZ_PJUR01000004.1 Protein Homology CDS 72135 73325 . + 0 ID=cds-WP_101457200.1;Parent=gene-CYJ01_RS02430;Dbxref=GenBank:WP_101457200.1;Name=WP_101457200.1;Ontology_term=GO:0006555,GO:1901605,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA,alpha-amino acid metabolic process|1901605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=CYJ01_RS02430;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_101457200.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 73442 74113 . + . ID=gene-CYJ01_RS02435;Name=CYJ01_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02435;old_locus_tag=CYJ01_02435 NZ_PJUR01000004.1 Protein Homology CDS 73442 74113 . + 0 ID=cds-WP_101457201.1;Parent=gene-CYJ01_RS02435;Dbxref=GenBank:WP_101457201.1;Name=WP_101457201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=CYJ01_RS02435;product=DUF2750 domain-containing protein;protein_id=WP_101457201.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 74523 75320 . - . ID=gene-CYJ01_RS02440;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=CYJ01_RS02440;old_locus_tag=CYJ01_02440 NZ_PJUR01000004.1 Protein Homology CDS 74523 75320 . - 0 ID=cds-WP_101457202.1;Parent=gene-CYJ01_RS02440;Dbxref=GenBank:WP_101457202.1;Name=WP_101457202.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=CYJ01_RS02440;product=type II pantothenate kinase;protein_id=WP_101457202.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 76376 77968 . - . ID=gene-CYJ01_RS02445;Name=CYJ01_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02445;old_locus_tag=CYJ01_02445 NZ_PJUR01000004.1 Protein Homology CDS 76376 77968 . - 0 ID=cds-WP_014613317.1;Parent=gene-CYJ01_RS02445;Dbxref=GenBank:WP_014613317.1;Name=WP_014613317.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=CYJ01_RS02445;product=BCCT family transporter;protein_id=WP_014613317.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 78139 79002 . + . ID=gene-CYJ01_RS02450;Name=CYJ01_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02450;old_locus_tag=CYJ01_02450 NZ_PJUR01000004.1 Protein Homology CDS 78139 79002 . + 0 ID=cds-WP_065354669.1;Parent=gene-CYJ01_RS02450;Dbxref=GenBank:WP_065354669.1;Name=WP_065354669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165785.1;locus_tag=CYJ01_RS02450;product=GNAT family N-acetyltransferase;protein_id=WP_065354669.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 79271 79813 . + . ID=gene-CYJ01_RS02455;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CYJ01_RS02455;old_locus_tag=CYJ01_02455 NZ_PJUR01000004.1 Protein Homology CDS 79271 79813 . + 0 ID=cds-WP_014613320.1;Parent=gene-CYJ01_RS02455;Dbxref=GenBank:WP_014613320.1;Name=WP_014613320.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=CYJ01_RS02455;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_014613320.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 80224 81837 . + . ID=gene-CYJ01_RS02460;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CYJ01_RS02460;old_locus_tag=CYJ01_02460 NZ_PJUR01000004.1 Protein Homology CDS 80224 81837 . + 0 ID=cds-WP_014613321.1;Parent=gene-CYJ01_RS02460;Dbxref=GenBank:WP_014613321.1;Name=WP_014613321.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613321.1;locus_tag=CYJ01_RS02460;product=CTP synthase;protein_id=WP_014613321.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 82276 83634 . + . ID=gene-CYJ01_RS02465;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CYJ01_RS02465;old_locus_tag=CYJ01_02465 NZ_PJUR01000004.1 Protein Homology CDS 82276 83634 . + 0 ID=cds-WP_065354115.1;Parent=gene-CYJ01_RS02465;Dbxref=GenBank:WP_065354115.1;Name=WP_065354115.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613322.1;locus_tag=CYJ01_RS02465;product=glycerol-3-phosphate transporter;protein_id=WP_065354115.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 84059 84583 . - . ID=gene-CYJ01_RS02470;Name=CYJ01_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02470;old_locus_tag=CYJ01_02470 NZ_PJUR01000004.1 Protein Homology CDS 84059 84583 . - 0 ID=cds-WP_101457203.1;Parent=gene-CYJ01_RS02470;Dbxref=GenBank:WP_101457203.1;Name=WP_101457203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613324.1;locus_tag=CYJ01_RS02470;product=DUF2529 family protein;protein_id=WP_101457203.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 84849 85721 . + . ID=gene-CYJ01_RS02475;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02475;old_locus_tag=CYJ01_02475 NZ_PJUR01000004.1 Protein Homology CDS 84849 85721 . + 0 ID=cds-WP_015729446.1;Parent=gene-CYJ01_RS02475;Dbxref=GenBank:WP_015729446.1;Name=WP_015729446.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=CYJ01_RS02475;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_015729446.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 86066 87331 . + . ID=gene-CYJ01_RS02480;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=CYJ01_RS02480;old_locus_tag=CYJ01_02480 NZ_PJUR01000004.1 Protein Homology CDS 86066 87331 . + 0 ID=cds-WP_070407671.1;Parent=gene-CYJ01_RS02480;Dbxref=GenBank:WP_070407671.1;Name=WP_070407671.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=CYJ01_RS02480;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_070407671.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 87379 87708 . + . ID=gene-CYJ01_RS02485;Name=CYJ01_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02485;old_locus_tag=CYJ01_02485 NZ_PJUR01000004.1 Protein Homology CDS 87379 87708 . + 0 ID=cds-WP_014613327.1;Parent=gene-CYJ01_RS02485;Dbxref=GenBank:WP_014613327.1;Name=WP_014613327.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613327.1;locus_tag=CYJ01_RS02485;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014613327.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 87889 89322 . + . ID=gene-CYJ01_RS02490;Name=CYJ01_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02490;old_locus_tag=CYJ01_02490 NZ_PJUR01000004.1 Protein Homology CDS 87889 89322 . + 0 ID=cds-WP_014613328.1;Parent=gene-CYJ01_RS02490;Dbxref=GenBank:WP_014613328.1;Name=WP_014613328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165794.1;locus_tag=CYJ01_RS02490;product=aldehyde dehydrogenase family protein;protein_id=WP_014613328.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 89413 89616 . - . ID=gene-CYJ01_RS02495;Name=CYJ01_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02495;old_locus_tag=CYJ01_02495 NZ_PJUR01000004.1 GeneMarkS-2+ CDS 89413 89616 . - 0 ID=cds-WP_096533988.1;Parent=gene-CYJ01_RS02495;Dbxref=GenBank:WP_096533988.1;Name=WP_096533988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS02495;product=hypothetical protein;protein_id=WP_096533988.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 90195 91508 . + . ID=gene-CYJ01_RS02500;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CYJ01_RS02500;old_locus_tag=CYJ01_02500 NZ_PJUR01000004.1 Protein Homology CDS 90195 91508 . + 0 ID=cds-WP_014613330.1;Parent=gene-CYJ01_RS02500;Dbxref=GenBank:WP_014613330.1;Name=WP_014613330.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613330.1;locus_tag=CYJ01_RS02500;product=transcription termination factor Rho;protein_id=WP_014613330.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 91631 91885 . + . ID=gene-CYJ01_RS02505;Name=CYJ01_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02505;old_locus_tag=CYJ01_02505 NZ_PJUR01000004.1 Protein Homology CDS 91631 91885 . + 0 ID=cds-WP_014613331.1;Parent=gene-CYJ01_RS02505;Dbxref=GenBank:WP_014613331.1;Name=WP_014613331.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=CYJ01_RS02505;product=type B 50S ribosomal protein L31;protein_id=WP_014613331.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 92233 92835 . + . ID=gene-CYJ01_RS02510;Name=CYJ01_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02510;old_locus_tag=CYJ01_02510 NZ_PJUR01000004.1 Protein Homology CDS 92233 92835 . + 0 ID=cds-WP_014613332.1;Parent=gene-CYJ01_RS02510;Dbxref=GenBank:WP_014613332.1;Name=WP_014613332.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613332.1;locus_tag=CYJ01_RS02510;product=thymidine kinase;protein_id=WP_014613332.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 92835 93911 . + . ID=gene-CYJ01_RS02515;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02515;old_locus_tag=CYJ01_02515 NZ_PJUR01000004.1 Protein Homology CDS 92835 93911 . + 0 ID=cds-WP_015729443.1;Parent=gene-CYJ01_RS02515;Dbxref=GenBank:WP_015729443.1;Name=WP_015729443.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CYJ01_RS02515;product=peptide chain release factor 1;protein_id=WP_015729443.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 93901 94743 . + . ID=gene-CYJ01_RS02520;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=CYJ01_RS02520;old_locus_tag=CYJ01_02520 NZ_PJUR01000004.1 Protein Homology CDS 93901 94743 . + 0 ID=cds-WP_096533607.1;Parent=gene-CYJ01_RS02520;Dbxref=GenBank:WP_096533607.1;Name=WP_096533607.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=CYJ01_RS02520;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_096533607.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 94909 95961 . + . ID=gene-CYJ01_RS02525;Name=CYJ01_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02525;old_locus_tag=CYJ01_02525 NZ_PJUR01000004.1 Protein Homology CDS 94909 95961 . + 0 ID=cds-WP_014613335.1;Parent=gene-CYJ01_RS02525;Dbxref=GenBank:WP_014613335.1;Name=WP_014613335.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613335.1;locus_tag=CYJ01_RS02525;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_014613335.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 95958 96383 . + . ID=gene-CYJ01_RS02530;Name=CYJ01_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02530;old_locus_tag=CYJ01_02530 NZ_PJUR01000004.1 Protein Homology CDS 95958 96383 . + 0 ID=cds-WP_101457204.1;Parent=gene-CYJ01_RS02530;Dbxref=GenBank:WP_101457204.1;Name=WP_101457204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=CYJ01_RS02530;product=low molecular weight protein arginine phosphatase;protein_id=WP_101457204.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 96501 97028 . + . ID=gene-CYJ01_RS02535;Name=CYJ01_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02535;old_locus_tag=CYJ01_02535 NZ_PJUR01000004.1 Protein Homology CDS 96501 97028 . + 0 ID=cds-WP_014613337.1;Parent=gene-CYJ01_RS02535;Dbxref=GenBank:WP_014613337.1;Name=WP_014613337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=CYJ01_RS02535;product=TIGR01440 family protein;protein_id=WP_014613337.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 97049 98287 . + . ID=gene-CYJ01_RS02540;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02540;old_locus_tag=CYJ01_02540 NZ_PJUR01000004.1 Protein Homology CDS 97049 98287 . + 0 ID=cds-WP_101457205.1;Parent=gene-CYJ01_RS02540;Dbxref=GenBank:WP_101457205.1;Name=WP_101457205.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500830.1;locus_tag=CYJ01_RS02540;product=serine hydroxymethyltransferase;protein_id=WP_101457205.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 98321 98950 . + . ID=gene-CYJ01_RS02545;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CYJ01_RS02545;old_locus_tag=CYJ01_02545 NZ_PJUR01000004.1 Protein Homology CDS 98321 98950 . + 0 ID=cds-WP_101457206.1;Parent=gene-CYJ01_RS02545;Dbxref=GenBank:WP_101457206.1;Name=WP_101457206.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=CYJ01_RS02545;product=uracil phosphoribosyltransferase;protein_id=WP_101457206.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 98973 100112 . + . ID=gene-CYJ01_RS02550;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02550;old_locus_tag=CYJ01_02550 NZ_PJUR01000004.1 Protein Homology CDS 98973 100112 . + 0 ID=cds-WP_014613340.1;Parent=gene-CYJ01_RS02550;Dbxref=GenBank:WP_014613340.1;Name=WP_014613340.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169294.1;locus_tag=CYJ01_RS02550;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_014613340.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 100281 100637 . + . ID=gene-CYJ01_RS02555;Name=CYJ01_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02555;old_locus_tag=CYJ01_02555 NZ_PJUR01000004.1 Protein Homology CDS 100281 100637 . + 0 ID=cds-WP_014613341.1;Parent=gene-CYJ01_RS02555;Dbxref=GenBank:WP_014613341.1;Name=WP_014613341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=CYJ01_RS02555;product=ATP synthase subunit I;protein_id=WP_014613341.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 100672 101394 . + . ID=gene-CYJ01_RS02560;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02560;old_locus_tag=CYJ01_02560 NZ_PJUR01000004.1 Protein Homology CDS 100672 101394 . + 0 ID=cds-WP_037542529.1;Parent=gene-CYJ01_RS02560;Dbxref=GenBank:WP_037542529.1;Name=WP_037542529.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275237.1;locus_tag=CYJ01_RS02560;product=F0F1 ATP synthase subunit A;protein_id=WP_037542529.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 101437 101649 . + . ID=gene-CYJ01_RS02565;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CYJ01_RS02565;old_locus_tag=CYJ01_02565 NZ_PJUR01000004.1 Protein Homology CDS 101437 101649 . + 0 ID=cds-WP_014613343.1;Parent=gene-CYJ01_RS02565;Dbxref=GenBank:WP_014613343.1;Name=WP_014613343.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613343.1;locus_tag=CYJ01_RS02565;product=F0F1 ATP synthase subunit C;protein_id=WP_014613343.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 101810 102334 . + . ID=gene-CYJ01_RS02570;Name=CYJ01_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02570;old_locus_tag=CYJ01_02570 NZ_PJUR01000004.1 Protein Homology CDS 101810 102334 . + 0 ID=cds-WP_096534009.1;Parent=gene-CYJ01_RS02570;Dbxref=GenBank:WP_096534009.1;Name=WP_096534009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CYJ01_RS02570;product=F0F1 ATP synthase subunit B;protein_id=WP_096534009.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 102334 102873 . + . ID=gene-CYJ01_RS02575;Name=CYJ01_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02575;old_locus_tag=CYJ01_02575 NZ_PJUR01000004.1 Protein Homology CDS 102334 102873 . + 0 ID=cds-WP_037542533.1;Parent=gene-CYJ01_RS02575;Dbxref=GenBank:WP_037542533.1;Name=WP_037542533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729438.1;locus_tag=CYJ01_RS02575;product=F0F1 ATP synthase subunit delta;protein_id=WP_037542533.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 102900 104411 . + . ID=gene-CYJ01_RS02580;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02580;old_locus_tag=CYJ01_02580 NZ_PJUR01000004.1 Protein Homology CDS 102900 104411 . + 0 ID=cds-WP_014613346.1;Parent=gene-CYJ01_RS02580;Dbxref=GenBank:WP_014613346.1;Name=WP_014613346.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=CYJ01_RS02580;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014613346.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 104449 105315 . + . ID=gene-CYJ01_RS02585;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CYJ01_RS02585;old_locus_tag=CYJ01_02585 NZ_PJUR01000004.1 Protein Homology CDS 104449 105315 . + 0 ID=cds-WP_101457207.1;Parent=gene-CYJ01_RS02585;Dbxref=GenBank:WP_101457207.1;Name=WP_101457207.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302681.1;locus_tag=CYJ01_RS02585;product=ATP synthase F1 subunit gamma;protein_id=WP_101457207.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 105340 106752 . + . ID=gene-CYJ01_RS02590;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02590;old_locus_tag=CYJ01_02590 NZ_PJUR01000004.1 Protein Homology CDS 105340 106752 . + 0 ID=cds-WP_014613348.1;Parent=gene-CYJ01_RS02590;Dbxref=GenBank:WP_014613348.1;Name=WP_014613348.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CYJ01_RS02590;product=F0F1 ATP synthase subunit beta;protein_id=WP_014613348.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 106775 107179 . + . ID=gene-CYJ01_RS02595;Name=CYJ01_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02595;old_locus_tag=CYJ01_02595 NZ_PJUR01000004.1 Protein Homology CDS 106775 107179 . + 0 ID=cds-WP_014613349.1;Parent=gene-CYJ01_RS02595;Dbxref=GenBank:WP_014613349.1;Name=WP_014613349.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094394.1;locus_tag=CYJ01_RS02595;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_014613349.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 107572 107802 . + . ID=gene-CYJ01_RS02600;Name=CYJ01_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02600;old_locus_tag=CYJ01_02600 NZ_PJUR01000004.1 Protein Homology CDS 107572 107802 . + 0 ID=cds-WP_014613350.1;Parent=gene-CYJ01_RS02600;Dbxref=GenBank:WP_014613350.1;Name=WP_014613350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613350.1;locus_tag=CYJ01_RS02600;product=DUF1146 family protein;protein_id=WP_014613350.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 107913 109178 . + . ID=gene-CYJ01_RS02605;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02605;old_locus_tag=CYJ01_02605 NZ_PJUR01000004.1 Protein Homology CDS 107913 109178 . + 0 ID=cds-WP_014613351.1;Parent=gene-CYJ01_RS02605;Dbxref=GenBank:WP_014613351.1;Name=WP_014613351.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=CYJ01_RS02605;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_014613351.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 109150 109368 . + . ID=gene-CYJ01_RS02610;Name=CYJ01_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02610;old_locus_tag=CYJ01_02610 NZ_PJUR01000004.1 Protein Homology CDS 109150 109368 . + 0 ID=cds-WP_230493221.1;Parent=gene-CYJ01_RS02610;Dbxref=GenBank:WP_230493221.1;Name=WP_230493221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=CYJ01_RS02610;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_230493221.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 109368 109811 . + . ID=gene-CYJ01_RS02615;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS02615;old_locus_tag=CYJ01_02615 NZ_PJUR01000004.1 Protein Homology CDS 109368 109811 . + 0 ID=cds-WP_014613353.1;Parent=gene-CYJ01_RS02615;Dbxref=GenBank:WP_014613353.1;Name=WP_014613353.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426460.1;locus_tag=CYJ01_RS02615;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_014613353.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 109925 110359 . - . ID=gene-CYJ01_RS02620;Name=CYJ01_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02620;old_locus_tag=CYJ01_02620 NZ_PJUR01000004.1 Protein Homology CDS 109925 110359 . - 0 ID=cds-WP_014613354.1;Parent=gene-CYJ01_RS02620;Dbxref=GenBank:WP_014613354.1;Name=WP_014613354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613354.1;locus_tag=CYJ01_RS02620;product=YwpF-like family protein;protein_id=WP_014613354.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 110540 110896 . + . ID=gene-CYJ01_RS02625;Name=CYJ01_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02625;old_locus_tag=CYJ01_02625 NZ_PJUR01000004.1 Protein Homology CDS 110540 110896 . + 0 ID=cds-WP_014613355.1;Parent=gene-CYJ01_RS02625;Dbxref=GenBank:WP_014613355.1;Name=WP_014613355.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729436.1;locus_tag=CYJ01_RS02625;product=single-stranded DNA-binding protein;protein_id=WP_014613355.1;transl_table=11 NZ_PJUR01000004.1 cmsearch riboswitch 111310 111413 . + . ID=id-NZ_PJUR01000004.1:111310..111413;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000004.1 RefSeq gene 111480 112163 . + . ID=gene-CYJ01_RS02630;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02630;old_locus_tag=CYJ01_02630 NZ_PJUR01000004.1 Protein Homology CDS 111480 112163 . + 0 ID=cds-WP_014613356.1;Parent=gene-CYJ01_RS02630;Dbxref=GenBank:WP_014613356.1;Name=WP_014613356.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729435.1;locus_tag=CYJ01_RS02630;product=thiaminase II;protein_id=WP_014613356.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 112163 112969 . + . ID=gene-CYJ01_RS02635;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02635;old_locus_tag=CYJ01_02635 NZ_PJUR01000004.1 Protein Homology CDS 112163 112969 . + 0 ID=cds-WP_101457213.1;Parent=gene-CYJ01_RS02635;Dbxref=GenBank:WP_101457213.1;Name=WP_101457213.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=CYJ01_RS02635;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_101457213.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 112971 113774 . + . ID=gene-CYJ01_RS02640;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CYJ01_RS02640;old_locus_tag=CYJ01_02640 NZ_PJUR01000004.1 Protein Homology CDS 112971 113774 . + 0 ID=cds-WP_101457208.1;Parent=gene-CYJ01_RS02640;Dbxref=GenBank:WP_101457208.1;Name=WP_101457208.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165813.1;locus_tag=CYJ01_RS02640;product=hydroxyethylthiazole kinase;protein_id=WP_101457208.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 113764 114402 . + . ID=gene-CYJ01_RS02645;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CYJ01_RS02645;old_locus_tag=CYJ01_02645 NZ_PJUR01000004.1 Protein Homology CDS 113764 114402 . + 0 ID=cds-WP_014613359.1;Parent=gene-CYJ01_RS02645;Dbxref=GenBank:WP_014613359.1;Name=WP_014613359.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613359.1;locus_tag=CYJ01_RS02645;product=thiamine phosphate synthase;protein_id=WP_014613359.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 114491 115357 . + . ID=gene-CYJ01_RS02650;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02650;old_locus_tag=CYJ01_02650 NZ_PJUR01000004.1 Protein Homology CDS 114491 115357 . + 0 ID=cds-WP_014613360.1;Parent=gene-CYJ01_RS02650;Dbxref=GenBank:WP_014613360.1;Name=WP_014613360.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729433.1;locus_tag=CYJ01_RS02650;product=membrane protein insertase YidC;protein_id=WP_014613360.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 115411 116067 . - . ID=gene-CYJ01_RS02655;Name=CYJ01_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02655;old_locus_tag=CYJ01_02655 NZ_PJUR01000004.1 Protein Homology CDS 115411 116067 . - 0 ID=cds-WP_101457209.1;Parent=gene-CYJ01_RS02655;Dbxref=GenBank:WP_101457209.1;Name=WP_101457209.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165816.1;locus_tag=CYJ01_RS02655;product=HD domain-containing protein;protein_id=WP_101457209.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 116088 117578 . - . ID=gene-CYJ01_RS02660;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ01_RS02660;old_locus_tag=CYJ01_02660 NZ_PJUR01000004.1 Protein Homology CDS 116088 117578 . - 0 ID=cds-WP_014613362.1;Parent=gene-CYJ01_RS02660;Dbxref=GenBank:WP_014613362.1;Name=WP_014613362.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=CYJ01_RS02660;product=cardiolipin synthase;protein_id=WP_014613362.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 117710 117997 . + . ID=gene-CYJ01_RS02665;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=CYJ01_RS02665;old_locus_tag=CYJ01_02665 NZ_PJUR01000004.1 Protein Homology CDS 117710 117997 . + 0 ID=cds-WP_101457210.1;Parent=gene-CYJ01_RS02665;Dbxref=GenBank:WP_101457210.1;Name=WP_101457210.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500801.1;locus_tag=CYJ01_RS02665;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_101457210.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 118010 118231 . + . ID=gene-CYJ01_RS02670;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=CYJ01_RS02670;old_locus_tag=CYJ01_02670 NZ_PJUR01000004.1 Protein Homology CDS 118010 118231 . + 0 ID=cds-WP_014613364.1;Parent=gene-CYJ01_RS02670;Dbxref=GenBank:WP_014613364.1;Name=WP_014613364.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613364.1;locus_tag=CYJ01_RS02670;product=putative copper chaperone CsoZ;protein_id=WP_014613364.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 118235 118441 . + . ID=gene-CYJ01_RS02675;Name=CYJ01_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02675;old_locus_tag=CYJ01_02675 NZ_PJUR01000004.1 Protein Homology CDS 118235 118441 . + 0 ID=cds-WP_014613365.1;Parent=gene-CYJ01_RS02675;Dbxref=GenBank:WP_014613365.1;Name=WP_014613365.1;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613365.1;locus_tag=CYJ01_RS02675;product=cation transporter;protein_id=WP_014613365.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 118542 120722 . + . ID=gene-CYJ01_RS02680;Name=CYJ01_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02680;old_locus_tag=CYJ01_02680 NZ_PJUR01000004.1 Protein Homology CDS 118542 120722 . + 0 ID=cds-WP_015729432.1;Parent=gene-CYJ01_RS02680;Dbxref=GenBank:WP_015729432.1;Name=WP_015729432.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165821.1;locus_tag=CYJ01_RS02680;product=heavy metal translocating P-type ATPase;protein_id=WP_015729432.1;transl_table=11 NZ_PJUR01000004.1 RefSeq gene 120808 120954 . + . ID=gene-CYJ01_RS12080;Name=CYJ01_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12080 NZ_PJUR01000004.1 Protein Homology CDS 120808 120954 . + 0 ID=cds-WP_014613367.1;Parent=gene-CYJ01_RS12080;Dbxref=GenBank:WP_014613367.1;Name=WP_014613367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613367.1;locus_tag=CYJ01_RS12080;product=Lmo0850 family protein;protein_id=WP_014613367.1;transl_table=11 ##sequence-region NZ_PJUR01000040.1 1 14028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000040.1 RefSeq region 1 14028 . + . ID=NZ_PJUR01000040.1:1..14028;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000040.1 RefSeq pseudogene 1 283 . + . ID=gene-CYJ01_RS12325;Name=CYJ01_RS12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12325;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000040.1 GeneMarkS-2+ CDS 1 283 . + 1 ID=cds-CYJ01_RS12325;Parent=gene-CYJ01_RS12325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12325;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 350 676 . + . ID=gene-CYJ01_RS12330;Name=CYJ01_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12330 NZ_PJUR01000040.1 Protein Homology CDS 350 676 . + 0 ID=cds-WP_241900540.1;Parent=gene-CYJ01_RS12330;Dbxref=GenBank:WP_241900540.1;Name=WP_241900540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046294.3;locus_tag=CYJ01_RS12330;product=Mu transposase domain-containing protein;protein_id=WP_241900540.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 687 1454 . + . ID=gene-CYJ01_RS10805;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=CYJ01_RS10805;old_locus_tag=CYJ01_10810 NZ_PJUR01000040.1 Protein Homology CDS 687 1454 . + 0 ID=cds-WP_101457552.1;Parent=gene-CYJ01_RS10805;Dbxref=GenBank:WP_101457552.1;Name=WP_101457552.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168928.1;locus_tag=CYJ01_RS10805;product=IS21-like element helper ATPase IstB;protein_id=WP_101457552.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 2187 2918 . - . ID=gene-CYJ01_RS10810;Name=CYJ01_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10810;old_locus_tag=CYJ01_10815 NZ_PJUR01000040.1 Protein Homology CDS 2187 2918 . - 0 ID=cds-WP_101457553.1;Parent=gene-CYJ01_RS10810;Dbxref=GenBank:WP_101457553.1;Name=WP_101457553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750883.1;locus_tag=CYJ01_RS10810;product=exotoxin;protein_id=WP_101457553.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 3642 4349 . - . ID=gene-CYJ01_RS10815;Name=CYJ01_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10815;old_locus_tag=CYJ01_10820 NZ_PJUR01000040.1 Protein Homology CDS 3642 4349 . - 0 ID=cds-WP_014612972.1;Parent=gene-CYJ01_RS10815;Dbxref=GenBank:WP_014612972.1;Name=WP_014612972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=CYJ01_RS10815;product=hypothetical protein;protein_id=WP_014612972.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 4771 6189 . + . ID=gene-CYJ01_RS10820;Name=CYJ01_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10820;old_locus_tag=CYJ01_10825 NZ_PJUR01000040.1 Protein Homology CDS 4771 6189 . + 0 ID=cds-WP_063278849.1;Parent=gene-CYJ01_RS10820;Dbxref=GenBank:WP_063278849.1;Name=WP_063278849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=CYJ01_RS10820;product=phosphate--AMP phosphotransferase;protein_id=WP_063278849.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 6293 7168 . + . ID=gene-CYJ01_RS10825;Name=CYJ01_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10825;old_locus_tag=CYJ01_10830 NZ_PJUR01000040.1 Protein Homology CDS 6293 7168 . + 0 ID=cds-WP_014612974.1;Parent=gene-CYJ01_RS10825;Dbxref=GenBank:WP_014612974.1;Name=WP_014612974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=CYJ01_RS10825;product=alpha/beta fold hydrolase;protein_id=WP_014612974.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 7250 7459 . - . ID=gene-CYJ01_RS10830;Name=CYJ01_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10830;old_locus_tag=CYJ01_10835 NZ_PJUR01000040.1 Protein Homology CDS 7250 7459 . - 0 ID=cds-WP_063278850.1;Parent=gene-CYJ01_RS10830;Dbxref=GenBank:WP_063278850.1;Name=WP_063278850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167250.1;locus_tag=CYJ01_RS10830;product=hypothetical protein;protein_id=WP_063278850.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 7646 8770 . + . ID=gene-CYJ01_RS10835;Name=CYJ01_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10835;old_locus_tag=CYJ01_10840 NZ_PJUR01000040.1 Protein Homology CDS 7646 8770 . + 0 ID=cds-WP_063278851.1;Parent=gene-CYJ01_RS10835;Dbxref=GenBank:WP_063278851.1;Name=WP_063278851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=CYJ01_RS10835;product=hypothetical protein;protein_id=WP_063278851.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 8977 10494 . - . ID=gene-CYJ01_RS10840;Name=CYJ01_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10840;old_locus_tag=CYJ01_10845 NZ_PJUR01000040.1 Protein Homology CDS 8977 10494 . - 0 ID=cds-WP_015729630.1;Parent=gene-CYJ01_RS10840;Dbxref=GenBank:WP_015729630.1;Name=WP_015729630.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=CYJ01_RS10840;product=M4 family metallopeptidase;protein_id=WP_015729630.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 10875 11759 . + . ID=gene-CYJ01_RS10845;Name=CYJ01_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10845;old_locus_tag=CYJ01_10850 NZ_PJUR01000040.1 Protein Homology CDS 10875 11759 . + 0 ID=cds-WP_096533450.1;Parent=gene-CYJ01_RS10845;Dbxref=GenBank:WP_096533450.1;Name=WP_096533450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_464196.1;locus_tag=CYJ01_RS10845;product=SDR family oxidoreductase;protein_id=WP_096533450.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 11986 13143 . + . ID=gene-CYJ01_RS10850;Name=CYJ01_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10850;old_locus_tag=CYJ01_10855 NZ_PJUR01000040.1 Protein Homology CDS 11986 13143 . + 0 ID=cds-WP_014612979.1;Parent=gene-CYJ01_RS10850;Dbxref=GenBank:WP_014612979.1;Name=WP_014612979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165895.1;locus_tag=CYJ01_RS10850;product=FAD/NAD(P)-binding protein;protein_id=WP_014612979.1;transl_table=11 NZ_PJUR01000040.1 RefSeq gene 13215 13610 . + . ID=gene-CYJ01_RS10855;Name=CYJ01_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10855;old_locus_tag=CYJ01_10860 NZ_PJUR01000040.1 Protein Homology CDS 13215 13610 . + 0 ID=cds-WP_014612980.1;Parent=gene-CYJ01_RS10855;Dbxref=GenBank:WP_014612980.1;Name=WP_014612980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=CYJ01_RS10855;product=hypothetical protein;protein_id=WP_014612980.1;transl_table=11 ##sequence-region NZ_PJUR01000041.1 1 9138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000041.1 RefSeq region 1 9138 . + . ID=NZ_PJUR01000041.1:1..9138;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000041.1 RefSeq gene 569 1165 . - . ID=gene-CYJ01_RS10860;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CYJ01_RS10860;old_locus_tag=CYJ01_10865 NZ_PJUR01000041.1 Protein Homology CDS 569 1165 . - 0 ID=cds-WP_014614826.1;Parent=gene-CYJ01_RS10860;Dbxref=GenBank:WP_014614826.1;Name=WP_014614826.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CYJ01_RS10860;product=recombination mediator RecR;protein_id=WP_014614826.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 1167 1487 . - . ID=gene-CYJ01_RS10865;Name=CYJ01_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10865;old_locus_tag=CYJ01_10870 NZ_PJUR01000041.1 Protein Homology CDS 1167 1487 . - 0 ID=cds-WP_014614827.1;Parent=gene-CYJ01_RS10865;Dbxref=GenBank:WP_014614827.1;Name=WP_014614827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=CYJ01_RS10865;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_014614827.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 1579 3282 . - . ID=gene-CYJ01_RS10870;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CYJ01_RS10870;old_locus_tag=CYJ01_10875 NZ_PJUR01000041.1 Protein Homology CDS 1579 3282 . - 0 ID=cds-WP_014614828.1;Parent=gene-CYJ01_RS10870;Dbxref=GenBank:WP_014614828.1;Name=WP_014614828.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=CYJ01_RS10870;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014614828.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 3349 3882 . - . ID=gene-CYJ01_RS10875;Name=CYJ01_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10875;old_locus_tag=CYJ01_10880 NZ_PJUR01000041.1 Protein Homology CDS 3349 3882 . - 0 ID=cds-WP_014614829.1;Parent=gene-CYJ01_RS10875;Dbxref=GenBank:WP_014614829.1;Name=WP_014614829.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=CYJ01_RS10875;product=GNAT family N-acetyltransferase;protein_id=WP_014614829.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 3984 4253 . - . ID=gene-CYJ01_RS10880;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CYJ01_RS10880;old_locus_tag=CYJ01_10885 NZ_PJUR01000041.1 cmsearch SRP_RNA 3984 4253 . - . ID=rna-CYJ01_RS10880;Parent=gene-CYJ01_RS10880;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS10880;product=signal recognition particle sRNA large type NZ_PJUR01000041.1 cmsearch exon 3984 4253 . - . ID=exon-CYJ01_RS10880-1;Parent=rna-CYJ01_RS10880;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS10880;product=signal recognition particle sRNA large type NZ_PJUR01000041.1 RefSeq gene 4339 5073 . - . ID=gene-CYJ01_RS10885;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CYJ01_RS10885;old_locus_tag=CYJ01_10890 NZ_PJUR01000041.1 Protein Homology CDS 4339 5073 . - 0 ID=cds-WP_063284944.1;Parent=gene-CYJ01_RS10885;Dbxref=GenBank:WP_063284944.1;Name=WP_063284944.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166102.1;locus_tag=CYJ01_RS10885;product=trehalose operon repressor;protein_id=WP_063284944.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 5095 6726 . - . ID=gene-CYJ01_RS10890;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CYJ01_RS10890;old_locus_tag=CYJ01_10895 NZ_PJUR01000041.1 Protein Homology CDS 5095 6726 . - 0 ID=cds-WP_096533655.1;Parent=gene-CYJ01_RS10890;Dbxref=GenBank:WP_096533655.1;Name=WP_096533655.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220085.1;locus_tag=CYJ01_RS10890;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_096533655.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 6771 8207 . - . ID=gene-CYJ01_RS10895;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=CYJ01_RS10895;old_locus_tag=CYJ01_10900 NZ_PJUR01000041.1 Protein Homology CDS 6771 8207 . - 0 ID=cds-WP_014614832.1;Parent=gene-CYJ01_RS10895;Dbxref=GenBank:WP_014614832.1;Name=WP_014614832.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614832.1;locus_tag=CYJ01_RS10895;product=PTS system trehalose-specific EIIBC component;protein_id=WP_014614832.1;transl_table=11 NZ_PJUR01000041.1 RefSeq gene 8527 8619 . - . ID=gene-CYJ01_RS10905;Name=CYJ01_RS10905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10905;old_locus_tag=CYJ01_10910 NZ_PJUR01000041.1 tRNAscan-SE tRNA 8527 8619 . - . ID=rna-CYJ01_RS10905;Parent=gene-CYJ01_RS10905;anticodon=(pos:complement(8581..8583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10905;product=tRNA-Ser NZ_PJUR01000041.1 tRNAscan-SE exon 8527 8619 . - . ID=exon-CYJ01_RS10905-1;Parent=rna-CYJ01_RS10905;anticodon=(pos:complement(8581..8583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10905;product=tRNA-Ser NZ_PJUR01000041.1 RefSeq gene 8628 8701 . - . ID=gene-CYJ01_RS10910;Name=CYJ01_RS10910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10910;old_locus_tag=CYJ01_10915 NZ_PJUR01000041.1 tRNAscan-SE tRNA 8628 8701 . - . ID=rna-CYJ01_RS10910;Parent=gene-CYJ01_RS10910;anticodon=(pos:complement(8665..8667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10910;product=tRNA-Ile NZ_PJUR01000041.1 tRNAscan-SE exon 8628 8701 . - . ID=exon-CYJ01_RS10910-1;Parent=rna-CYJ01_RS10910;anticodon=(pos:complement(8665..8667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10910;product=tRNA-Ile NZ_PJUR01000041.1 RefSeq gene 8727 8800 . - . ID=gene-CYJ01_RS10915;Name=CYJ01_RS10915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10915;old_locus_tag=CYJ01_10920 NZ_PJUR01000041.1 tRNAscan-SE tRNA 8727 8800 . - . ID=rna-CYJ01_RS10915;Parent=gene-CYJ01_RS10915;anticodon=(pos:complement(8764..8766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10915;product=tRNA-Met NZ_PJUR01000041.1 tRNAscan-SE exon 8727 8800 . - . ID=exon-CYJ01_RS10915-1;Parent=rna-CYJ01_RS10915;anticodon=(pos:complement(8764..8766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10915;product=tRNA-Met NZ_PJUR01000041.1 RefSeq gene 8831 8906 . - . ID=gene-CYJ01_RS10920;Name=CYJ01_RS10920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10920;old_locus_tag=CYJ01_10925 NZ_PJUR01000041.1 tRNAscan-SE tRNA 8831 8906 . - . ID=rna-CYJ01_RS10920;Parent=gene-CYJ01_RS10920;anticodon=(pos:complement(8871..8873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10920;product=tRNA-Ala NZ_PJUR01000041.1 tRNAscan-SE exon 8831 8906 . - . ID=exon-CYJ01_RS10920-1;Parent=rna-CYJ01_RS10920;anticodon=(pos:complement(8871..8873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10920;product=tRNA-Ala NZ_PJUR01000041.1 RefSeq gene 8929 9005 . - . ID=gene-CYJ01_RS10925;Name=CYJ01_RS10925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS10925;old_locus_tag=CYJ01_10930 NZ_PJUR01000041.1 tRNAscan-SE tRNA 8929 9005 . - . ID=rna-CYJ01_RS10925;Parent=gene-CYJ01_RS10925;anticodon=(pos:complement(8969..8971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10925;product=tRNA-Ile NZ_PJUR01000041.1 tRNAscan-SE exon 8929 9005 . - . ID=exon-CYJ01_RS10925-1;Parent=rna-CYJ01_RS10925;anticodon=(pos:complement(8969..8971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS10925;product=tRNA-Ile ##sequence-region NZ_PJUR01000042.1 1 11028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000042.1 RefSeq region 1 11028 . + . ID=NZ_PJUR01000042.1:1..11028;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000042.1 RefSeq gene 294 1340 . - . ID=gene-CYJ01_RS10935;Name=CYJ01_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10935;old_locus_tag=CYJ01_10940 NZ_PJUR01000042.1 Protein Homology CDS 294 1340 . - 0 ID=cds-WP_015728650.1;Parent=gene-CYJ01_RS10935;Dbxref=GenBank:WP_015728650.1;Name=WP_015728650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012273.7;locus_tag=CYJ01_RS10935;product=glutathione S-transferase family protein;protein_id=WP_015728650.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 1354 2664 . - . ID=gene-CYJ01_RS10940;Name=CYJ01_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10940;old_locus_tag=CYJ01_10945 NZ_PJUR01000042.1 Protein Homology CDS 1354 2664 . - 0 ID=cds-WP_015728649.1;Parent=gene-CYJ01_RS10940;Dbxref=GenBank:WP_015728649.1;Name=WP_015728649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728649.1;locus_tag=CYJ01_RS10940;product=radical SAM/SPASM domain-containing protein;protein_id=WP_015728649.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 3346 3708 . - . ID=gene-CYJ01_RS10945;Name=CYJ01_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10945;old_locus_tag=CYJ01_10950 NZ_PJUR01000042.1 Protein Homology CDS 3346 3708 . - 0 ID=cds-WP_014614702.1;Parent=gene-CYJ01_RS10945;Dbxref=GenBank:WP_014614702.1;Name=WP_014614702.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=CYJ01_RS10945;product=DUF423 domain-containing protein;protein_id=WP_014614702.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 3736 4059 . - . ID=gene-CYJ01_RS10950;Name=CYJ01_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10950;old_locus_tag=CYJ01_10955 NZ_PJUR01000042.1 Protein Homology CDS 3736 4059 . - 0 ID=cds-WP_070407643.1;Parent=gene-CYJ01_RS10950;Dbxref=GenBank:WP_070407643.1;Name=WP_070407643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=CYJ01_RS10950;product=DUF5327 family protein;protein_id=WP_070407643.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 4052 4729 . - . ID=gene-CYJ01_RS10955;Name=CYJ01_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10955;old_locus_tag=CYJ01_10960 NZ_PJUR01000042.1 Protein Homology CDS 4052 4729 . - 0 ID=cds-WP_284730715.1;Parent=gene-CYJ01_RS10955;Dbxref=GenBank:WP_284730715.1;Name=WP_284730715.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=CYJ01_RS10955;product=uracil-DNA glycosylase;protein_id=WP_284730715.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 4910 5740 . + . ID=gene-CYJ01_RS10960;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ01_RS10960;old_locus_tag=CYJ01_10965 NZ_PJUR01000042.1 Protein Homology CDS 4910 5740 . + 0 ID=cds-WP_014614705.1;Parent=gene-CYJ01_RS10960;Dbxref=GenBank:WP_014614705.1;Name=WP_014614705.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CYJ01_RS10960;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014614705.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 5885 6142 . - . ID=gene-CYJ01_RS10965;Name=CYJ01_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10965;old_locus_tag=CYJ01_10970 NZ_PJUR01000042.1 Protein Homology CDS 5885 6142 . - 0 ID=cds-WP_020219918.1;Parent=gene-CYJ01_RS10965;Dbxref=GenBank:WP_020219918.1;Name=WP_020219918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219918.1;locus_tag=CYJ01_RS10965;product=hypothetical protein;protein_id=WP_020219918.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 6142 6513 . - . ID=gene-CYJ01_RS10970;Name=CYJ01_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10970;old_locus_tag=CYJ01_10975 NZ_PJUR01000042.1 Protein Homology CDS 6142 6513 . - 0 ID=cds-WP_015728646.1;Parent=gene-CYJ01_RS10970;Dbxref=GenBank:WP_015728646.1;Name=WP_015728646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614707.1;locus_tag=CYJ01_RS10970;product=hypothetical protein;protein_id=WP_015728646.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 6482 7627 . - . ID=gene-CYJ01_RS10975;Name=CYJ01_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10975;old_locus_tag=CYJ01_10980 NZ_PJUR01000042.1 Protein Homology CDS 6482 7627 . - 0 ID=cds-WP_014614708.1;Parent=gene-CYJ01_RS10975;Dbxref=GenBank:WP_014614708.1;Name=WP_014614708.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614708.1;locus_tag=CYJ01_RS10975;product=thiolase family protein;protein_id=WP_014614708.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 7624 8973 . - . ID=gene-CYJ01_RS10980;Name=CYJ01_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10980;old_locus_tag=CYJ01_10985 NZ_PJUR01000042.1 Protein Homology CDS 7624 8973 . - 0 ID=cds-WP_101431452.1;Parent=gene-CYJ01_RS10980;Dbxref=GenBank:WP_101431452.1;Name=WP_101431452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728644.1;locus_tag=CYJ01_RS10980;product=AMP-binding protein;protein_id=WP_101431452.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 9184 9870 . - . ID=gene-CYJ01_RS10985;Name=CYJ01_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10985;old_locus_tag=CYJ01_10990 NZ_PJUR01000042.1 Protein Homology CDS 9184 9870 . - 0 ID=cds-WP_014614710.1;Parent=gene-CYJ01_RS10985;Dbxref=GenBank:WP_014614710.1;Name=WP_014614710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=CYJ01_RS10985;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_014614710.1;transl_table=11 NZ_PJUR01000042.1 RefSeq gene 10087 10944 . - . ID=gene-CYJ01_RS10990;Name=CYJ01_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10990;old_locus_tag=CYJ01_10995 NZ_PJUR01000042.1 Protein Homology CDS 10087 10944 . - 0 ID=cds-WP_015728640.1;Parent=gene-CYJ01_RS10990;Dbxref=GenBank:WP_015728640.1;Name=WP_015728640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ01_RS10990;product=oxidoreductase;protein_id=WP_015728640.1;transl_table=11 ##sequence-region NZ_PJUR01000043.1 1 12116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000043.1 RefSeq region 1 12116 . + . ID=NZ_PJUR01000043.1:1..12116;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000043.1 RefSeq gene 318 872 . + . ID=gene-CYJ01_RS10995;Name=CYJ01_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS10995;old_locus_tag=CYJ01_11000 NZ_PJUR01000043.1 Protein Homology CDS 318 872 . + 0 ID=cds-WP_015729355.1;Parent=gene-CYJ01_RS10995;Dbxref=GenBank:WP_015729355.1;Name=WP_015729355.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=CYJ01_RS10995;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_015729355.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 1213 1287 . + . ID=gene-CYJ01_RS11000;Name=CYJ01_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11000;old_locus_tag=CYJ01_11005 NZ_PJUR01000043.1 tRNAscan-SE tRNA 1213 1287 . + . ID=rna-CYJ01_RS11000;Parent=gene-CYJ01_RS11000;anticodon=(pos:1246..1248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11000;product=tRNA-Glu NZ_PJUR01000043.1 tRNAscan-SE exon 1213 1287 . + . ID=exon-CYJ01_RS11000-1;Parent=rna-CYJ01_RS11000;anticodon=(pos:1246..1248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11000;product=tRNA-Glu NZ_PJUR01000043.1 RefSeq gene 1294 1370 . + . ID=gene-CYJ01_RS11005;Name=CYJ01_RS11005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11005;old_locus_tag=CYJ01_11010 NZ_PJUR01000043.1 tRNAscan-SE tRNA 1294 1370 . + . ID=rna-CYJ01_RS11005;Parent=gene-CYJ01_RS11005;anticodon=(pos:1328..1330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11005;product=tRNA-Asp NZ_PJUR01000043.1 tRNAscan-SE exon 1294 1370 . + . ID=exon-CYJ01_RS11005-1;Parent=rna-CYJ01_RS11005;anticodon=(pos:1328..1330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11005;product=tRNA-Asp NZ_PJUR01000043.1 RefSeq gene 1381 1453 . + . ID=gene-CYJ01_RS11010;Name=CYJ01_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11010;old_locus_tag=CYJ01_11015 NZ_PJUR01000043.1 tRNAscan-SE tRNA 1381 1453 . + . ID=rna-CYJ01_RS11010;Parent=gene-CYJ01_RS11010;anticodon=(pos:1414..1416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11010;product=tRNA-Phe NZ_PJUR01000043.1 tRNAscan-SE exon 1381 1453 . + . ID=exon-CYJ01_RS11010-1;Parent=rna-CYJ01_RS11010;anticodon=(pos:1414..1416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11010;product=tRNA-Phe NZ_PJUR01000043.1 RefSeq gene 1462 1537 . + . ID=gene-CYJ01_RS11015;Name=CYJ01_RS11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11015;old_locus_tag=CYJ01_11020 NZ_PJUR01000043.1 tRNAscan-SE tRNA 1462 1537 . + . ID=rna-CYJ01_RS11015;Parent=gene-CYJ01_RS11015;anticodon=(pos:1495..1497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11015;product=tRNA-Thr NZ_PJUR01000043.1 tRNAscan-SE exon 1462 1537 . + . ID=exon-CYJ01_RS11015-1;Parent=rna-CYJ01_RS11015;anticodon=(pos:1495..1497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11015;product=tRNA-Thr NZ_PJUR01000043.1 RefSeq gene 1542 1614 . + . ID=gene-CYJ01_RS11020;Name=CYJ01_RS11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11020;old_locus_tag=CYJ01_11025 NZ_PJUR01000043.1 tRNAscan-SE tRNA 1542 1614 . + . ID=rna-CYJ01_RS11020;Parent=gene-CYJ01_RS11020;anticodon=(pos:1575..1577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11020;product=tRNA-Lys NZ_PJUR01000043.1 tRNAscan-SE exon 1542 1614 . + . ID=exon-CYJ01_RS11020-1;Parent=rna-CYJ01_RS11020;anticodon=(pos:1575..1577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11020;product=tRNA-Lys NZ_PJUR01000043.1 RefSeq gene 1993 2898 . + . ID=gene-CYJ01_RS11025;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=CYJ01_RS11025;old_locus_tag=CYJ01_11030 NZ_PJUR01000043.1 Protein Homology CDS 1993 2898 . + 0 ID=cds-WP_014613286.1;Parent=gene-CYJ01_RS11025;Dbxref=GenBank:WP_014613286.1;Name=WP_014613286.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=CYJ01_RS11025;product=arginase;protein_id=WP_014613286.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 3130 3936 . + . ID=gene-CYJ01_RS11030;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS11030;old_locus_tag=CYJ01_11035 NZ_PJUR01000043.1 Protein Homology CDS 3130 3936 . + 0 ID=cds-WP_014613287.1;Parent=gene-CYJ01_RS11030;Dbxref=GenBank:WP_014613287.1;Name=WP_014613287.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168352.1;locus_tag=CYJ01_RS11030;product=diadenylate cyclase CdaA;protein_id=WP_014613287.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 3937 4869 . + . ID=gene-CYJ01_RS11035;Name=CYJ01_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11035;old_locus_tag=CYJ01_11040 NZ_PJUR01000043.1 Protein Homology CDS 3937 4869 . + 0 ID=cds-WP_015729470.1;Parent=gene-CYJ01_RS11035;Dbxref=GenBank:WP_015729470.1;Name=WP_015729470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=CYJ01_RS11035;product=CdaR family protein;protein_id=WP_015729470.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 4897 6252 . + . ID=gene-CYJ01_RS11040;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CYJ01_RS11040;old_locus_tag=CYJ01_11045 NZ_PJUR01000043.1 Protein Homology CDS 4897 6252 . + 0 ID=cds-WP_101457555.1;Parent=gene-CYJ01_RS11040;Dbxref=GenBank:WP_101457555.1;Name=WP_101457555.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613289.1;locus_tag=CYJ01_RS11040;product=phosphoglucosamine mutase;protein_id=WP_101457555.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 6373 6600 . - . ID=gene-CYJ01_RS11045;Name=CYJ01_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11045;old_locus_tag=CYJ01_11050 NZ_PJUR01000043.1 GeneMarkS-2+ CDS 6373 6600 . - 0 ID=cds-WP_241900541.1;Parent=gene-CYJ01_RS11045;Dbxref=GenBank:WP_241900541.1;Name=WP_241900541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11045;product=hypothetical protein;protein_id=WP_241900541.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 7641 9443 . + . ID=gene-CYJ01_RS11050;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CYJ01_RS11050;old_locus_tag=CYJ01_11055 NZ_PJUR01000043.1 Protein Homology CDS 7641 9443 . + 0 ID=cds-WP_065520410.1;Parent=gene-CYJ01_RS11050;Dbxref=GenBank:WP_065520410.1;Name=WP_065520410.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CYJ01_RS11050;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_065520410.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 9649 9912 . + . ID=gene-CYJ01_RS11055;Name=CYJ01_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11055;old_locus_tag=CYJ01_11060 NZ_PJUR01000043.1 Protein Homology CDS 9649 9912 . + 0 ID=cds-WP_101457556.1;Parent=gene-CYJ01_RS11055;Dbxref=GenBank:WP_101457556.1;Name=WP_101457556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168360.1;locus_tag=CYJ01_RS11055;product=hypothetical protein;protein_id=WP_101457556.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 10024 10803 . + . ID=gene-CYJ01_RS11060;Name=CYJ01_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11060;old_locus_tag=CYJ01_11065 NZ_PJUR01000043.1 Protein Homology CDS 10024 10803 . + 0 ID=cds-WP_101457557.1;Parent=gene-CYJ01_RS11060;Dbxref=GenBank:WP_101457557.1;Name=WP_101457557.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=CYJ01_RS11060;product=ABC transporter ATP-binding protein;protein_id=WP_101457557.1;transl_table=11 NZ_PJUR01000043.1 RefSeq gene 10878 11732 . + . ID=gene-CYJ01_RS11065;Name=CYJ01_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11065;old_locus_tag=CYJ01_11070 NZ_PJUR01000043.1 Protein Homology CDS 10878 11732 . + 0 ID=cds-WP_101457558.1;Parent=gene-CYJ01_RS11065;Dbxref=GenBank:WP_101457558.1;Name=WP_101457558.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729462.1;locus_tag=CYJ01_RS11065;product=HAD family hydrolase;protein_id=WP_101457558.1;transl_table=11 ##sequence-region NZ_PJUR01000044.1 1 9494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000044.1 RefSeq region 1 9494 . + . ID=NZ_PJUR01000044.1:1..9494;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000044.1 RefSeq gene 1 889 . + . ID=gene-CYJ01_RS12020;Name=CYJ01_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12020;old_locus_tag=CYJ01_11075;partial=true;start_range=.,1 NZ_PJUR01000044.1 Protein Homology CDS 1 889 . + 1 ID=cds-WP_157929459.1;Parent=gene-CYJ01_RS12020;Dbxref=GenBank:WP_157929459.1;Name=WP_157929459.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ01_RS12020;partial=true;product=MFS transporter;protein_id=WP_157929459.1;start_range=.,1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 1251 1382 . + . ID=gene-CYJ01_RS12335;Name=CYJ01_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12335;old_locus_tag=CYJ01_11080 NZ_PJUR01000044.1 Protein Homology CDS 1251 1382 . + 0 ID=cds-WP_226957574.1;Parent=gene-CYJ01_RS12335;Dbxref=GenBank:WP_226957574.1;Name=WP_226957574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=CYJ01_RS12335;product=SH3 domain-containing protein;protein_id=WP_226957574.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 1635 3086 . - . ID=gene-CYJ01_RS11080;Name=CYJ01_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11080;old_locus_tag=CYJ01_11085 NZ_PJUR01000044.1 Protein Homology CDS 1635 3086 . - 0 ID=cds-WP_014614701.1;Parent=gene-CYJ01_RS11080;Dbxref=GenBank:WP_014614701.1;Name=WP_014614701.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166304.1;locus_tag=CYJ01_RS11080;product=APC family permease;protein_id=WP_014614701.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 3318 3881 . + . ID=gene-CYJ01_RS11085;Name=CYJ01_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11085;old_locus_tag=CYJ01_11090 NZ_PJUR01000044.1 Protein Homology CDS 3318 3881 . + 0 ID=cds-WP_096636550.1;Parent=gene-CYJ01_RS11085;Dbxref=GenBank:WP_096636550.1;Name=WP_096636550.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728653.1;locus_tag=CYJ01_RS11085;product=GNAT family N-acetyltransferase;protein_id=WP_096636550.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 4115 5284 . - . ID=gene-CYJ01_RS11090;Name=CYJ01_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11090;old_locus_tag=CYJ01_11095 NZ_PJUR01000044.1 Protein Homology CDS 4115 5284 . - 0 ID=cds-WP_063284866.1;Parent=gene-CYJ01_RS11090;Dbxref=GenBank:WP_063284866.1;Name=WP_063284866.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166302.1;locus_tag=CYJ01_RS11090;product=DUF418 domain-containing protein;protein_id=WP_063284866.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 5388 5951 . - . ID=gene-CYJ01_RS11095;Name=CYJ01_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11095;old_locus_tag=CYJ01_11100 NZ_PJUR01000044.1 Protein Homology CDS 5388 5951 . - 0 ID=cds-WP_014614699.1;Parent=gene-CYJ01_RS11095;Dbxref=GenBank:WP_014614699.1;Name=WP_014614699.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614699.1;locus_tag=CYJ01_RS11095;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014614699.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 6078 6725 . + . ID=gene-CYJ01_RS11100;Name=CYJ01_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11100;old_locus_tag=CYJ01_11105 NZ_PJUR01000044.1 Protein Homology CDS 6078 6725 . + 0 ID=cds-WP_020220353.1;Parent=gene-CYJ01_RS11100;Dbxref=GenBank:WP_020220353.1;Name=WP_020220353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=CYJ01_RS11100;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_020220353.1;transl_table=11 NZ_PJUR01000044.1 RefSeq gene 6742 8595 . + . ID=gene-CYJ01_RS11105;Name=CYJ01_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11105;old_locus_tag=CYJ01_11110 NZ_PJUR01000044.1 Protein Homology CDS 6742 8595 . + 0 ID=cds-WP_101457559.1;Parent=gene-CYJ01_RS11105;Dbxref=GenBank:WP_101457559.1;Name=WP_101457559.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728656.1;locus_tag=CYJ01_RS11105;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_101457559.1;transl_table=11 ##sequence-region NZ_PJUR01000045.1 1 1507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000045.1 RefSeq region 1 1507 . + . ID=NZ_PJUR01000045.1:1..1507;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000045.1 RefSeq gene 1 1288 . - . ID=gene-CYJ01_RS11110;Name=CYJ01_RS11110;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS11110;old_locus_tag=CYJ01_11115;partial=true;start_range=.,1 NZ_PJUR01000045.1 cmsearch rRNA 1 1288 . - . ID=rna-CYJ01_RS11110;Parent=gene-CYJ01_RS11110;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11110;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUR01000045.1 cmsearch exon 1 1288 . - . ID=exon-CYJ01_RS11110-1;Parent=rna-CYJ01_RS11110;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11110;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PJUR01000046.1 1 5016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000046.1 RefSeq region 1 5016 . + . ID=NZ_PJUR01000046.1:1..5016;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000046.1 RefSeq pseudogene 1 5016 . - . ID=gene-CYJ01_RS12340;Name=CYJ01_RS12340;end_range=5016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12340;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000046.1 Protein Homology CDS 1 5016 . - 1 ID=cds-CYJ01_RS12340;Parent=gene-CYJ01_RS12340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=5016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS12340;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000047.1 1 6772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000047.1 RefSeq region 1 6772 . + . ID=NZ_PJUR01000047.1:1..6772;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000047.1 RefSeq gene 1089 2237 . + . ID=gene-CYJ01_RS12345;Name=CYJ01_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12345;old_locus_tag=CYJ01_11130 NZ_PJUR01000047.1 GeneMarkS-2+ CDS 1089 2237 . + 0 ID=cds-WP_241900543.1;Parent=gene-CYJ01_RS12345;Dbxref=GenBank:WP_241900543.1;Name=WP_241900543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12345;product=hypothetical protein;protein_id=WP_241900543.1;transl_table=11 NZ_PJUR01000047.1 RefSeq pseudogene 2255 2338 . + . ID=gene-CYJ01_RS12530;Name=CYJ01_RS12530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12530;partial=true;pseudo=true;start_range=.,2255 NZ_PJUR01000047.1 Protein Homology CDS 2255 2338 . + 0 ID=cds-CYJ01_RS12530;Parent=gene-CYJ01_RS12530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=CYJ01_RS12530;partial=true;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;start_range=.,2255;transl_table=11 NZ_PJUR01000047.1 RefSeq gene 2416 4035 . + . ID=gene-CYJ01_RS11130;Name=CYJ01_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11130;old_locus_tag=CYJ01_11135 NZ_PJUR01000047.1 Protein Homology CDS 2416 4035 . + 0 ID=cds-WP_101457560.1;Parent=gene-CYJ01_RS11130;Dbxref=GenBank:WP_101457560.1;Name=WP_101457560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830362.1;locus_tag=CYJ01_RS11130;product=poly(glycerol-phosphate) alpha-glucosyltransferase;protein_id=WP_101457560.1;transl_table=11 NZ_PJUR01000047.1 RefSeq gene 4028 4204 . - . ID=gene-CYJ01_RS12025;Name=CYJ01_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12025 NZ_PJUR01000047.1 GeneMarkS-2+ CDS 4028 4204 . - 0 ID=cds-WP_157929460.1;Parent=gene-CYJ01_RS12025;Dbxref=GenBank:WP_157929460.1;Name=WP_157929460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12025;product=hypothetical protein;protein_id=WP_157929460.1;transl_table=11 NZ_PJUR01000047.1 RefSeq gene 4269 6332 . + . ID=gene-CYJ01_RS11135;Name=CYJ01_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11135;old_locus_tag=CYJ01_11140 NZ_PJUR01000047.1 Protein Homology CDS 4269 6332 . + 0 ID=cds-WP_101457561.1;Parent=gene-CYJ01_RS11135;Dbxref=GenBank:WP_101457561.1;Name=WP_101457561.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF019850.7;locus_tag=CYJ01_RS11135;product=Mur ligase family protein;protein_id=WP_101457561.1;transl_table=11 NZ_PJUR01000047.1 RefSeq gene 6482 6772 . - . ID=gene-CYJ01_RS11140;Name=CYJ01_RS11140;end_range=6772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11140;old_locus_tag=CYJ01_11145;partial=true NZ_PJUR01000047.1 Protein Homology CDS 6482 6772 . - 0 ID=cds-WP_157929461.1;Parent=gene-CYJ01_RS11140;Dbxref=GenBank:WP_157929461.1;Name=WP_157929461.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6772,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ01_RS11140;partial=true;product=transposase;protein_id=WP_157929461.1;transl_table=11 ##sequence-region NZ_PJUR01000048.1 1 6640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000048.1 RefSeq region 1 6640 . + . ID=NZ_PJUR01000048.1:1..6640;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000048.1 RefSeq gene 144 258 . + . ID=gene-CYJ01_RS11150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ01_RS11150;old_locus_tag=CYJ01_11155 NZ_PJUR01000048.1 cmsearch rRNA 144 258 . + . ID=rna-CYJ01_RS11150;Parent=gene-CYJ01_RS11150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11150;product=5S ribosomal RNA NZ_PJUR01000048.1 cmsearch exon 144 258 . + . ID=exon-CYJ01_RS11150-1;Parent=rna-CYJ01_RS11150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11150;product=5S ribosomal RNA NZ_PJUR01000048.1 RefSeq gene 346 2274 . + . ID=gene-CYJ01_RS11155;Name=CYJ01_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11155;old_locus_tag=CYJ01_11160 NZ_PJUR01000048.1 Protein Homology CDS 346 2274 . + 0 ID=cds-WP_015728598.1;Parent=gene-CYJ01_RS11155;Dbxref=GenBank:WP_015728598.1;Name=WP_015728598.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=CYJ01_RS11155;product=FUSC family protein;protein_id=WP_015728598.1;transl_table=11 NZ_PJUR01000048.1 RefSeq gene 2329 3738 . - . ID=gene-CYJ01_RS11160;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CYJ01_RS11160;old_locus_tag=CYJ01_11165 NZ_PJUR01000048.1 Protein Homology CDS 2329 3738 . - 0 ID=cds-WP_096548228.1;Parent=gene-CYJ01_RS11160;Dbxref=GenBank:WP_096548228.1;Name=WP_096548228.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614785.1;locus_tag=CYJ01_RS11160;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_096548228.1;transl_table=11 NZ_PJUR01000048.1 RefSeq gene 3848 4735 . + . ID=gene-CYJ01_RS11165;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=CYJ01_RS11165;old_locus_tag=CYJ01_11170 NZ_PJUR01000048.1 Protein Homology CDS 3848 4735 . + 0 ID=cds-WP_101457562.1;Parent=gene-CYJ01_RS11165;Dbxref=GenBank:WP_101457562.1;Name=WP_101457562.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CYJ01_RS11165;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_101457562.1;transl_table=11 NZ_PJUR01000048.1 RefSeq gene 4737 5294 . + . ID=gene-CYJ01_RS11170;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=CYJ01_RS11170;old_locus_tag=CYJ01_11175 NZ_PJUR01000048.1 Protein Homology CDS 4737 5294 . + 0 ID=cds-WP_014614783.1;Parent=gene-CYJ01_RS11170;Dbxref=GenBank:WP_014614783.1;Name=WP_014614783.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614783.1;locus_tag=CYJ01_RS11170;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_014614783.1;transl_table=11 NZ_PJUR01000048.1 RefSeq direct_repeat 5445 6603 . + . ID=id-NZ_PJUR01000048.1:5445..6603;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5445..5480;rpt_unit_seq=gttttagtactctgtcaaattaggtataagtgatac ##sequence-region NZ_PJUR01000049.1 1 9468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000049.1 RefSeq region 1 9468 . + . ID=NZ_PJUR01000049.1:1..9468;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000049.1 RefSeq gene 75 725 . - . ID=gene-CYJ01_RS11175;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CYJ01_RS11175;old_locus_tag=CYJ01_11180 NZ_PJUR01000049.1 Protein Homology CDS 75 725 . - 0 ID=cds-WP_101457563.1;Parent=gene-CYJ01_RS11175;Dbxref=GenBank:WP_101457563.1;Name=WP_101457563.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613812.1;locus_tag=CYJ01_RS11175;product=phosphate signaling complex protein PhoU;protein_id=WP_101457563.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 727 1569 . - . ID=gene-CYJ01_RS11180;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CYJ01_RS11180;old_locus_tag=CYJ01_11185 NZ_PJUR01000049.1 Protein Homology CDS 727 1569 . - 0 ID=cds-WP_101457564.1;Parent=gene-CYJ01_RS11180;Dbxref=GenBank:WP_101457564.1;Name=WP_101457564.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613811.1;locus_tag=CYJ01_RS11180;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_101457564.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 1587 2468 . - . ID=gene-CYJ01_RS11185;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CYJ01_RS11185;old_locus_tag=CYJ01_11190 NZ_PJUR01000049.1 Protein Homology CDS 1587 2468 . - 0 ID=cds-WP_014613810.1;Parent=gene-CYJ01_RS11185;Dbxref=GenBank:WP_014613810.1;Name=WP_014613810.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219627.1;locus_tag=CYJ01_RS11185;product=phosphate ABC transporter permease PstA;protein_id=WP_014613810.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 2468 3394 . - . ID=gene-CYJ01_RS11190;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CYJ01_RS11190;old_locus_tag=CYJ01_11195 NZ_PJUR01000049.1 Protein Homology CDS 2468 3394 . - 0 ID=cds-WP_037542861.1;Parent=gene-CYJ01_RS11190;Dbxref=GenBank:WP_037542861.1;Name=WP_037542861.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165222.1;locus_tag=CYJ01_RS11190;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_037542861.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 3512 4471 . - . ID=gene-CYJ01_RS11195;Name=CYJ01_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11195;old_locus_tag=CYJ01_11200 NZ_PJUR01000049.1 Protein Homology CDS 3512 4471 . - 0 ID=cds-WP_015729236.1;Parent=gene-CYJ01_RS11195;Dbxref=GenBank:WP_015729236.1;Name=WP_015729236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219629.1;locus_tag=CYJ01_RS11195;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_015729236.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 4740 6779 . - . ID=gene-CYJ01_RS11200;Name=CYJ01_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11200;old_locus_tag=CYJ01_11205 NZ_PJUR01000049.1 Protein Homology CDS 4740 6779 . - 0 ID=cds-WP_101457565.1;Parent=gene-CYJ01_RS11200;Dbxref=GenBank:WP_101457565.1;Name=WP_101457565.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613807.1;locus_tag=CYJ01_RS11200;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_101457565.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 7072 7671 . - . ID=gene-CYJ01_RS11205;Name=CYJ01_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11205;old_locus_tag=CYJ01_11210 NZ_PJUR01000049.1 Protein Homology CDS 7072 7671 . - 0 ID=cds-WP_014613806.1;Parent=gene-CYJ01_RS11205;Dbxref=GenBank:WP_014613806.1;Name=WP_014613806.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=CYJ01_RS11205;product=superoxide dismutase;protein_id=WP_014613806.1;transl_table=11 NZ_PJUR01000049.1 RefSeq gene 8018 9124 . + . ID=gene-CYJ01_RS11210;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CYJ01_RS11210;old_locus_tag=CYJ01_11215 NZ_PJUR01000049.1 Protein Homology CDS 8018 9124 . + 0 ID=cds-WP_014613804.1;Parent=gene-CYJ01_RS11210;Dbxref=GenBank:WP_014613804.1;Name=WP_014613804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219631.1;locus_tag=CYJ01_RS11210;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_014613804.1;transl_table=11 ##sequence-region NZ_PJUR01000005.1 1 133264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000005.1 RefSeq region 1 133264 . + . ID=NZ_PJUR01000005.1:1..133264;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000005.1 RefSeq gene 9 158 . + . ID=gene-CYJ01_RS02690;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ01_RS02690;old_locus_tag=CYJ01_02690 NZ_PJUR01000005.1 Protein Homology CDS 9 158 . + 0 ID=cds-WP_014613813.1;Parent=gene-CYJ01_RS02690;Dbxref=GenBank:WP_014613813.1;Name=WP_014613813.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ01_RS02690;product=50S ribosomal protein L33;protein_id=WP_014613813.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 308 847 . + . ID=gene-CYJ01_RS02695;Name=CYJ01_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02695;old_locus_tag=CYJ01_02695 NZ_PJUR01000005.1 Protein Homology CDS 308 847 . + 0 ID=cds-WP_037542863.1;Parent=gene-CYJ01_RS02695;Dbxref=GenBank:WP_037542863.1;Name=WP_037542863.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613814.1;locus_tag=CYJ01_RS02695;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_037542863.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 866 2305 . + . ID=gene-CYJ01_RS02700;Name=CYJ01_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02700;old_locus_tag=CYJ01_02700 NZ_PJUR01000005.1 Protein Homology CDS 866 2305 . + 0 ID=cds-WP_014613815.1;Parent=gene-CYJ01_RS02700;Dbxref=GenBank:WP_014613815.1;Name=WP_014613815.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=CYJ01_RS02700;product=rhomboid family intramembrane serine protease;protein_id=WP_014613815.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 2307 2510 . + . ID=gene-CYJ01_RS02705;Name=CYJ01_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02705;old_locus_tag=CYJ01_02705 NZ_PJUR01000005.1 Protein Homology CDS 2307 2510 . + 0 ID=cds-WP_014613816.1;Parent=gene-CYJ01_RS02705;Dbxref=GenBank:WP_014613816.1;Name=WP_014613816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=CYJ01_RS02705;product=YqgQ family protein;protein_id=WP_014613816.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 2507 3493 . + . ID=gene-CYJ01_RS02710;Name=CYJ01_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02710;old_locus_tag=CYJ01_02710 NZ_PJUR01000005.1 Protein Homology CDS 2507 3493 . + 0 ID=cds-WP_014613817.1;Parent=gene-CYJ01_RS02710;Dbxref=GenBank:WP_014613817.1;Name=WP_014613817.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=CYJ01_RS02710;product=ROK family glucokinase;protein_id=WP_014613817.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 3494 3805 . + . ID=gene-CYJ01_RS02715;Name=CYJ01_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02715;old_locus_tag=CYJ01_02715 NZ_PJUR01000005.1 Protein Homology CDS 3494 3805 . + 0 ID=cds-WP_014613818.1;Parent=gene-CYJ01_RS02715;Dbxref=GenBank:WP_014613818.1;Name=WP_014613818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613818.1;locus_tag=CYJ01_RS02715;product=MTH1187 family thiamine-binding protein;protein_id=WP_014613818.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 3818 4447 . + . ID=gene-CYJ01_RS02720;Name=CYJ01_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02720;old_locus_tag=CYJ01_02720 NZ_PJUR01000005.1 Protein Homology CDS 3818 4447 . + 0 ID=cds-WP_037542865.1;Parent=gene-CYJ01_RS02720;Dbxref=GenBank:WP_037542865.1;Name=WP_037542865.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165229.1;locus_tag=CYJ01_RS02720;product=MBL fold metallo-hydrolase;protein_id=WP_037542865.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 4608 5582 . + . ID=gene-CYJ01_RS02725;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02725;old_locus_tag=CYJ01_02725 NZ_PJUR01000005.1 Protein Homology CDS 4608 5582 . + 0 ID=cds-WP_014613820.1;Parent=gene-CYJ01_RS02725;Dbxref=GenBank:WP_014613820.1;Name=WP_014613820.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165230.1;locus_tag=CYJ01_RS02725;product=competence type IV pilus ATPase ComGA;protein_id=WP_014613820.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 5551 6618 . + . ID=gene-CYJ01_RS02730;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02730;old_locus_tag=CYJ01_02730 NZ_PJUR01000005.1 Protein Homology CDS 5551 6618 . + 0 ID=cds-WP_014613821.1;Parent=gene-CYJ01_RS02730;Dbxref=GenBank:WP_014613821.1;Name=WP_014613821.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=CYJ01_RS02730;product=competence type IV pilus assembly protein ComGB;protein_id=WP_014613821.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 6631 6954 . + . ID=gene-CYJ01_RS02735;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02735;old_locus_tag=CYJ01_02735 NZ_PJUR01000005.1 Protein Homology CDS 6631 6954 . + 0 ID=cds-WP_015729165.1;Parent=gene-CYJ01_RS02735;Dbxref=GenBank:WP_015729165.1;Name=WP_015729165.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165232.1;locus_tag=CYJ01_RS02735;product=competence type IV pilus major pilin ComGC;protein_id=WP_015729165.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 6932 7372 . + . ID=gene-CYJ01_RS02740;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02740;old_locus_tag=CYJ01_02740 NZ_PJUR01000005.1 Protein Homology CDS 6932 7372 . + 0 ID=cds-WP_101457214.1;Parent=gene-CYJ01_RS02740;Dbxref=GenBank:WP_101457214.1;Name=WP_101457214.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729164.1;locus_tag=CYJ01_RS02740;product=competence type IV pilus minor pilin ComGD;protein_id=WP_101457214.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 7477 7677 . + . ID=gene-CYJ01_RS12405;Name=CYJ01_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12405;old_locus_tag=CYJ01_02745 NZ_PJUR01000005.1 Protein Homology CDS 7477 7677 . + 0 ID=cds-WP_020219623.1;Parent=gene-CYJ01_RS12405;Dbxref=GenBank:WP_020219623.1;Name=WP_020219623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219623.1;locus_tag=CYJ01_RS12405;product=hypothetical protein;protein_id=WP_020219623.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 7583 8068 . + . ID=gene-CYJ01_RS02750;Name=CYJ01_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02750;old_locus_tag=CYJ01_02750 NZ_PJUR01000005.1 Protein Homology CDS 7583 8068 . + 0 ID=cds-WP_080552896.1;Parent=gene-CYJ01_RS02750;Dbxref=GenBank:WP_080552896.1;Name=WP_080552896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=CYJ01_RS02750;product=competence type IV pilus minor pilin ComGF;protein_id=WP_080552896.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 8232 8759 . + . ID=gene-CYJ01_RS02760;Name=CYJ01_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02760;old_locus_tag=CYJ01_02760 NZ_PJUR01000005.1 Protein Homology CDS 8232 8759 . + 0 ID=cds-WP_014613826.1;Parent=gene-CYJ01_RS02760;Dbxref=GenBank:WP_014613826.1;Name=WP_014613826.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613826.1;locus_tag=CYJ01_RS02760;product=shikimate kinase;protein_id=WP_014613826.1;transl_table=11 NZ_PJUR01000005.1 cmsearch riboswitch 8746 8841 . + . ID=id-NZ_PJUR01000005.1:8746..8841;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000005.1 RefSeq gene 8917 10008 . + . ID=gene-CYJ01_RS02765;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CYJ01_RS02765;old_locus_tag=CYJ01_02765 NZ_PJUR01000005.1 Protein Homology CDS 8917 10008 . + 0 ID=cds-WP_015729161.1;Parent=gene-CYJ01_RS02765;Dbxref=GenBank:WP_015729161.1;Name=WP_015729161.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636954.1;locus_tag=CYJ01_RS02765;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_015729161.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 10021 11370 . + . ID=gene-CYJ01_RS02770;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02770;old_locus_tag=CYJ01_02770 NZ_PJUR01000005.1 Protein Homology CDS 10021 11370 . + 0 ID=cds-WP_101457216.1;Parent=gene-CYJ01_RS02770;Dbxref=GenBank:WP_101457216.1;Name=WP_101457216.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=CYJ01_RS02770;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_101457216.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 11360 12832 . + . ID=gene-CYJ01_RS02775;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02775;old_locus_tag=CYJ01_02775 NZ_PJUR01000005.1 Protein Homology CDS 11360 12832 . + 0 ID=cds-WP_101457217.1;Parent=gene-CYJ01_RS02775;Dbxref=GenBank:WP_101457217.1;Name=WP_101457217.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500145.1;locus_tag=CYJ01_RS02775;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_101457217.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 13188 13565 . - . ID=gene-CYJ01_RS02780;Name=CYJ01_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02780;old_locus_tag=CYJ01_02780 NZ_PJUR01000005.1 Protein Homology CDS 13188 13565 . - 0 ID=cds-WP_370498505.1;Parent=gene-CYJ01_RS02780;Dbxref=GenBank:WP_370498505.1;Name=WP_370498505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449897.1;locus_tag=CYJ01_RS02780;product=rhodanese-like domain-containing protein;protein_id=WP_370498505.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 13725 14555 . + . ID=gene-CYJ01_RS02785;Name=CYJ01_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02785;old_locus_tag=CYJ01_02785 NZ_PJUR01000005.1 Protein Homology CDS 13725 14555 . + 0 ID=cds-WP_014613831.1;Parent=gene-CYJ01_RS02785;Dbxref=GenBank:WP_014613831.1;Name=WP_014613831.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=CYJ01_RS02785;product=lipoate--protein ligase family protein;protein_id=WP_014613831.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 14671 14895 . - . ID=gene-CYJ01_RS02790;Name=CYJ01_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02790;old_locus_tag=CYJ01_02790 NZ_PJUR01000005.1 Protein Homology CDS 14671 14895 . - 0 ID=cds-WP_014613832.1;Parent=gene-CYJ01_RS02790;Dbxref=GenBank:WP_014613832.1;Name=WP_014613832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613832.1;locus_tag=CYJ01_RS02790;product=SA1362 family protein;protein_id=WP_014613832.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 14916 15515 . - . ID=gene-CYJ01_RS02795;Name=CYJ01_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02795;old_locus_tag=CYJ01_02795 NZ_PJUR01000005.1 Protein Homology CDS 14916 15515 . - 0 ID=cds-WP_014613833.1;Parent=gene-CYJ01_RS02795;Dbxref=GenBank:WP_014613833.1;Name=WP_014613833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613833.1;locus_tag=CYJ01_RS02795;product=coiled-coil domain-containing 22 family protein;protein_id=WP_014613833.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 15610 16680 . + . ID=gene-CYJ01_RS02800;Name=CYJ01_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02800;old_locus_tag=CYJ01_02800 NZ_PJUR01000005.1 Protein Homology CDS 15610 16680 . + 0 ID=cds-WP_065354207.1;Parent=gene-CYJ01_RS02800;Dbxref=GenBank:WP_065354207.1;Name=WP_065354207.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613834.1;locus_tag=CYJ01_RS02800;product=M24 family metallopeptidase;protein_id=WP_065354207.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 16699 17256 . + . ID=gene-CYJ01_RS02805;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CYJ01_RS02805;old_locus_tag=CYJ01_02805 NZ_PJUR01000005.1 Protein Homology CDS 16699 17256 . + 0 ID=cds-WP_014613835.1;Parent=gene-CYJ01_RS02805;Dbxref=GenBank:WP_014613835.1;Name=WP_014613835.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=CYJ01_RS02805;product=elongation factor P;protein_id=WP_014613835.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 17589 18050 . + . ID=gene-CYJ01_RS02810;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02810;old_locus_tag=CYJ01_02810 NZ_PJUR01000005.1 Protein Homology CDS 17589 18050 . + 0 ID=cds-WP_037542948.1;Parent=gene-CYJ01_RS02810;Dbxref=GenBank:WP_037542948.1;Name=WP_037542948.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165243.1;locus_tag=CYJ01_RS02810;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542948.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 18052 19407 . + . ID=gene-CYJ01_RS02815;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02815;old_locus_tag=CYJ01_02815 NZ_PJUR01000005.1 Protein Homology CDS 18052 19407 . + 0 ID=cds-WP_101457218.1;Parent=gene-CYJ01_RS02815;Dbxref=GenBank:WP_101457218.1;Name=WP_101457218.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613837.1;locus_tag=CYJ01_RS02815;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_101457218.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 19428 19802 . + . ID=gene-CYJ01_RS02820;Name=CYJ01_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02820;old_locus_tag=CYJ01_02820 NZ_PJUR01000005.1 Protein Homology CDS 19428 19802 . + 0 ID=cds-WP_014613838.1;Parent=gene-CYJ01_RS02820;Dbxref=GenBank:WP_014613838.1;Name=WP_014613838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=CYJ01_RS02820;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613838.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 19823 20215 . + . ID=gene-CYJ01_RS02825;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02825;old_locus_tag=CYJ01_02825 NZ_PJUR01000005.1 Protein Homology CDS 19823 20215 . + 0 ID=cds-WP_014613839.1;Parent=gene-CYJ01_RS02825;Dbxref=GenBank:WP_014613839.1;Name=WP_014613839.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=CYJ01_RS02825;product=transcription antitermination factor NusB;protein_id=WP_014613839.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 20224 21570 . + . ID=gene-CYJ01_RS02830;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02830;old_locus_tag=CYJ01_02830 NZ_PJUR01000005.1 Protein Homology CDS 20224 21570 . + 0 ID=cds-WP_014613840.1;Parent=gene-CYJ01_RS02830;Dbxref=GenBank:WP_014613840.1;Name=WP_014613840.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=CYJ01_RS02830;product=exodeoxyribonuclease VII large subunit;protein_id=WP_014613840.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 21554 21778 . + . ID=gene-CYJ01_RS02835;Name=CYJ01_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02835;old_locus_tag=CYJ01_02835 NZ_PJUR01000005.1 Protein Homology CDS 21554 21778 . + 0 ID=cds-WP_014613841.1;Parent=gene-CYJ01_RS02835;Dbxref=GenBank:WP_014613841.1;Name=WP_014613841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=CYJ01_RS02835;product=exodeoxyribonuclease VII small subunit;protein_id=WP_014613841.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 21759 22640 . + . ID=gene-CYJ01_RS02840;Name=CYJ01_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02840;old_locus_tag=CYJ01_02840 NZ_PJUR01000005.1 Protein Homology CDS 21759 22640 . + 0 ID=cds-WP_101457219.1;Parent=gene-CYJ01_RS02840;Dbxref=GenBank:WP_101457219.1;Name=WP_101457219.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729158.1;locus_tag=CYJ01_RS02840;product=polyprenyl synthetase family protein;protein_id=WP_101457219.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 22710 24578 . + . ID=gene-CYJ01_RS02845;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CYJ01_RS02845;old_locus_tag=CYJ01_02845 NZ_PJUR01000005.1 Protein Homology CDS 22710 24578 . + 0 ID=cds-WP_101457220.1;Parent=gene-CYJ01_RS02845;Dbxref=GenBank:WP_101457220.1;Name=WP_101457220.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219621.1;locus_tag=CYJ01_RS02845;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_101457220.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 24862 25314 . + . ID=gene-CYJ01_RS02850;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=CYJ01_RS02850;old_locus_tag=CYJ01_02850 NZ_PJUR01000005.1 Protein Homology CDS 24862 25314 . + 0 ID=cds-WP_014613844.1;Parent=gene-CYJ01_RS02850;Dbxref=GenBank:WP_014613844.1;Name=WP_014613844.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=CYJ01_RS02850;product=transcriptional regulator AhrC/ArgR;protein_id=WP_014613844.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 25328 27010 . + . ID=gene-CYJ01_RS02855;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CYJ01_RS02855;old_locus_tag=CYJ01_02855 NZ_PJUR01000005.1 Protein Homology CDS 25328 27010 . + 0 ID=cds-WP_014613845.1;Parent=gene-CYJ01_RS02855;Dbxref=GenBank:WP_014613845.1;Name=WP_014613845.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729156.1;locus_tag=CYJ01_RS02855;product=DNA repair protein RecN;protein_id=WP_014613845.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 27017 27910 . + . ID=gene-CYJ01_RS02860;Name=CYJ01_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02860;old_locus_tag=CYJ01_02860 NZ_PJUR01000005.1 Protein Homology CDS 27017 27910 . + 0 ID=cds-WP_037542962.1;Parent=gene-CYJ01_RS02860;Dbxref=GenBank:WP_037542962.1;Name=WP_037542962.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613846.1;locus_tag=CYJ01_RS02860;product=phosphate acyltransferase;protein_id=WP_037542962.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 28484 29542 . + . ID=gene-CYJ01_RS02865;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=CYJ01_RS02865;old_locus_tag=CYJ01_02865 NZ_PJUR01000005.1 Protein Homology CDS 28484 29542 . + 0 ID=cds-WP_070407421.1;Parent=gene-CYJ01_RS02865;Dbxref=GenBank:WP_070407421.1;Name=WP_070407421.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613847.1;locus_tag=CYJ01_RS02865;product=butyrate kinase;protein_id=WP_070407421.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 29553 30971 . + . ID=gene-CYJ01_RS02870;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ01_RS02870;old_locus_tag=CYJ01_02870 NZ_PJUR01000005.1 Protein Homology CDS 29553 30971 . + 0 ID=cds-WP_101457221.1;Parent=gene-CYJ01_RS02870;Dbxref=GenBank:WP_101457221.1;Name=WP_101457221.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=CYJ01_RS02870;product=dihydrolipoyl dehydrogenase;protein_id=WP_101457221.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 30993 31991 . + . ID=gene-CYJ01_RS02875;Name=CYJ01_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02875;old_locus_tag=CYJ01_02875 NZ_PJUR01000005.1 Protein Homology CDS 30993 31991 . + 0 ID=cds-WP_014613849.1;Parent=gene-CYJ01_RS02875;Dbxref=GenBank:WP_014613849.1;Name=WP_014613849.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=CYJ01_RS02875;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014613849.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 31984 32967 . + . ID=gene-CYJ01_RS02880;Name=CYJ01_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02880;old_locus_tag=CYJ01_02880 NZ_PJUR01000005.1 Protein Homology CDS 31984 32967 . + 0 ID=cds-WP_014613850.1;Parent=gene-CYJ01_RS02880;Dbxref=GenBank:WP_014613850.1;Name=WP_014613850.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=CYJ01_RS02880;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014613850.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 32980 34254 . + . ID=gene-CYJ01_RS02885;Name=CYJ01_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02885;old_locus_tag=CYJ01_02885 NZ_PJUR01000005.1 Protein Homology CDS 32980 34254 . + 0 ID=cds-WP_063278761.1;Parent=gene-CYJ01_RS02885;Dbxref=GenBank:WP_063278761.1;Name=WP_063278761.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=CYJ01_RS02885;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_063278761.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 34480 34917 . + . ID=gene-CYJ01_RS02890;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02890;old_locus_tag=CYJ01_02890 NZ_PJUR01000005.1 Protein Homology CDS 34480 34917 . + 0 ID=cds-WP_014613852.1;Parent=gene-CYJ01_RS02890;Dbxref=GenBank:WP_014613852.1;Name=WP_014613852.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=CYJ01_RS02890;product=bacilliredoxin BrxB;protein_id=WP_014613852.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 34928 35905 . + . ID=gene-CYJ01_RS02895;Name=CYJ01_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02895;old_locus_tag=CYJ01_02895 NZ_PJUR01000005.1 Protein Homology CDS 34928 35905 . + 0 ID=cds-WP_014613853.1;Parent=gene-CYJ01_RS02895;Dbxref=GenBank:WP_014613853.1;Name=WP_014613853.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=CYJ01_RS02895;product=aromatic acid exporter family protein;protein_id=WP_014613853.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 35962 36063 . - . ID=gene-CYJ01_RS11985;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=CYJ01_RS11985 NZ_PJUR01000005.1 Protein Homology CDS 35962 36063 . - 0 ID=cds-WP_019165260.1;Parent=gene-CYJ01_RS11985;Dbxref=GenBank:WP_019165260.1;Name=WP_019165260.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=CYJ01_RS11985;product=stressosome-associated protein Prli42;protein_id=WP_019165260.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 36234 37349 . + . ID=gene-CYJ01_RS02900;Name=CYJ01_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02900;old_locus_tag=CYJ01_02900 NZ_PJUR01000005.1 Protein Homology CDS 36234 37349 . + 0 ID=cds-WP_101457222.1;Parent=gene-CYJ01_RS02900;Dbxref=GenBank:WP_101457222.1;Name=WP_101457222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613854.1;locus_tag=CYJ01_RS02900;product=tripeptidase T;protein_id=WP_101457222.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 37423 38826 . + . ID=gene-CYJ01_RS02905;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=CYJ01_RS02905;old_locus_tag=CYJ01_02905 NZ_PJUR01000005.1 Protein Homology CDS 37423 38826 . + 0 ID=cds-WP_014613855.1;Parent=gene-CYJ01_RS02905;Dbxref=GenBank:WP_014613855.1;Name=WP_014613855.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=CYJ01_RS02905;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_014613855.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 38884 39159 . - . ID=gene-CYJ01_RS02910;Name=CYJ01_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02910;old_locus_tag=CYJ01_02910 NZ_PJUR01000005.1 Protein Homology CDS 38884 39159 . - 0 ID=cds-WP_015729151.1;Parent=gene-CYJ01_RS02910;Dbxref=GenBank:WP_015729151.1;Name=WP_015729151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729151.1;locus_tag=CYJ01_RS02910;product=MFS transporter;protein_id=WP_015729151.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 39186 39656 . - . ID=gene-CYJ01_RS02915;Name=CYJ01_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02915;old_locus_tag=CYJ01_02915 NZ_PJUR01000005.1 Protein Homology CDS 39186 39656 . - 0 ID=cds-WP_070407426.1;Parent=gene-CYJ01_RS02915;Dbxref=GenBank:WP_070407426.1;Name=WP_070407426.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ01_RS02915;product=MFS transporter;protein_id=WP_070407426.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 39805 40074 . - . ID=gene-CYJ01_RS02920;Name=CYJ01_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02920;old_locus_tag=CYJ01_02920 NZ_PJUR01000005.1 Protein Homology CDS 39805 40074 . - 0 ID=cds-WP_225550015.1;Parent=gene-CYJ01_RS02920;Dbxref=GenBank:WP_225550015.1;Name=WP_225550015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729149.1;locus_tag=CYJ01_RS02920;product=MFS transporter;protein_id=WP_225550015.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 40256 41113 . - . ID=gene-CYJ01_RS02925;Name=CYJ01_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02925;old_locus_tag=CYJ01_02925 NZ_PJUR01000005.1 Protein Homology CDS 40256 41113 . - 0 ID=cds-WP_014613858.1;Parent=gene-CYJ01_RS02925;Dbxref=GenBank:WP_014613858.1;Name=WP_014613858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168734.1;locus_tag=CYJ01_RS02925;product=AraC family transcriptional regulator;protein_id=WP_014613858.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 41254 42738 . - . ID=gene-CYJ01_RS02930;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CYJ01_RS02930;old_locus_tag=CYJ01_02930 NZ_PJUR01000005.1 Protein Homology CDS 41254 42738 . - 0 ID=cds-WP_014613859.1;Parent=gene-CYJ01_RS02930;Dbxref=GenBank:WP_014613859.1;Name=WP_014613859.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165265.1;locus_tag=CYJ01_RS02930;product=glucose-6-phosphate dehydrogenase;protein_id=WP_014613859.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 42894 43811 . + . ID=gene-CYJ01_RS02935;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CYJ01_RS02935;old_locus_tag=CYJ01_02935 NZ_PJUR01000005.1 Protein Homology CDS 42894 43811 . + 0 ID=cds-WP_014613860.1;Parent=gene-CYJ01_RS02935;Dbxref=GenBank:WP_014613860.1;Name=WP_014613860.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165266.1;locus_tag=CYJ01_RS02935;product=ribonuclease Z;protein_id=WP_014613860.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 43936 44751 . - . ID=gene-CYJ01_RS02940;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CYJ01_RS02940;old_locus_tag=CYJ01_02940 NZ_PJUR01000005.1 Protein Homology CDS 43936 44751 . - 0 ID=cds-WP_014613861.1;Parent=gene-CYJ01_RS02940;Dbxref=GenBank:WP_014613861.1;Name=WP_014613861.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613861.1;locus_tag=CYJ01_RS02940;product=pyrroline-5-carboxylate reductase;protein_id=WP_014613861.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 44837 45592 . + . ID=gene-CYJ01_RS02945;Name=CYJ01_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02945;old_locus_tag=CYJ01_02945 NZ_PJUR01000005.1 Protein Homology CDS 44837 45592 . + 0 ID=cds-WP_101457223.1;Parent=gene-CYJ01_RS02945;Dbxref=GenBank:WP_101457223.1;Name=WP_101457223.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729147.1;locus_tag=CYJ01_RS02945;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_101457223.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 45589 46509 . - . ID=gene-CYJ01_RS02950;Name=CYJ01_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02950;old_locus_tag=CYJ01_02950 NZ_PJUR01000005.1 Protein Homology CDS 45589 46509 . - 0 ID=cds-WP_015729146.1;Parent=gene-CYJ01_RS02950;Dbxref=GenBank:WP_015729146.1;Name=WP_015729146.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613863.1;locus_tag=CYJ01_RS02950;product=aldo/keto reductase;protein_id=WP_015729146.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 46589 47131 . + . ID=gene-CYJ01_RS02955;Name=CYJ01_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02955;old_locus_tag=CYJ01_02955 NZ_PJUR01000005.1 Protein Homology CDS 46589 47131 . + 0 ID=cds-WP_014613864.1;Parent=gene-CYJ01_RS02955;Dbxref=GenBank:WP_014613864.1;Name=WP_014613864.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613864.1;locus_tag=CYJ01_RS02955;product=NUDIX hydrolase;protein_id=WP_014613864.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 47236 47691 . + . ID=gene-CYJ01_RS02960;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CYJ01_RS02960;old_locus_tag=CYJ01_02960 NZ_PJUR01000005.1 Protein Homology CDS 47236 47691 . + 0 ID=cds-WP_014613865.1;Parent=gene-CYJ01_RS02960;Dbxref=GenBank:WP_014613865.1;Name=WP_014613865.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613865.1;locus_tag=CYJ01_RS02960;product=ferric iron uptake transcriptional regulator;protein_id=WP_014613865.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 47731 48618 . + . ID=gene-CYJ01_RS02965;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CYJ01_RS02965;old_locus_tag=CYJ01_02965 NZ_PJUR01000005.1 Protein Homology CDS 47731 48618 . + 0 ID=cds-WP_014613866.1;Parent=gene-CYJ01_RS02965;Dbxref=GenBank:WP_014613866.1;Name=WP_014613866.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447735.1;locus_tag=CYJ01_RS02965;product=site-specific tyrosine recombinase XerD;protein_id=WP_014613866.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 48905 49411 . - . ID=gene-CYJ01_RS02970;Name=CYJ01_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02970;old_locus_tag=CYJ01_02970 NZ_PJUR01000005.1 Protein Homology CDS 48905 49411 . - 0 ID=cds-WP_096533738.1;Parent=gene-CYJ01_RS02970;Dbxref=GenBank:WP_096533738.1;Name=WP_096533738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613868.1;locus_tag=CYJ01_RS02970;product=DUF309 domain-containing protein;protein_id=WP_096533738.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 49506 50234 . + . ID=gene-CYJ01_RS02975;Name=CYJ01_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02975;old_locus_tag=CYJ01_02975 NZ_PJUR01000005.1 Protein Homology CDS 49506 50234 . + 0 ID=cds-WP_065520493.1;Parent=gene-CYJ01_RS02975;Dbxref=GenBank:WP_065520493.1;Name=WP_065520493.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168744.1;locus_tag=CYJ01_RS02975;product=segregation and condensation protein A;protein_id=WP_065520493.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 50224 50766 . + . ID=gene-CYJ01_RS02980;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CYJ01_RS02980;old_locus_tag=CYJ01_02980 NZ_PJUR01000005.1 Protein Homology CDS 50224 50766 . + 0 ID=cds-WP_063284382.1;Parent=gene-CYJ01_RS02980;Dbxref=GenBank:WP_063284382.1;Name=WP_063284382.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=CYJ01_RS02980;product=SMC-Scp complex subunit ScpB;protein_id=WP_063284382.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 50767 51513 . + . ID=gene-CYJ01_RS02985;Name=CYJ01_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02985;old_locus_tag=CYJ01_02985 NZ_PJUR01000005.1 Protein Homology CDS 50767 51513 . + 0 ID=cds-WP_101457224.1;Parent=gene-CYJ01_RS02985;Dbxref=GenBank:WP_101457224.1;Name=WP_101457224.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165277.1;locus_tag=CYJ01_RS02985;product=pseudouridine synthase;protein_id=WP_101457224.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 51625 52347 . + . ID=gene-CYJ01_RS02990;Name=CYJ01_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02990;old_locus_tag=CYJ01_02990 NZ_PJUR01000005.1 Protein Homology CDS 51625 52347 . + 0 ID=cds-WP_026066968.1;Parent=gene-CYJ01_RS02990;Dbxref=GenBank:WP_026066968.1;Name=WP_026066968.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724528.1;locus_tag=CYJ01_RS02990;product=response regulator transcription factor;protein_id=WP_026066968.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 52334 54091 . + . ID=gene-CYJ01_RS02995;Name=CYJ01_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS02995;old_locus_tag=CYJ01_02995 NZ_PJUR01000005.1 Protein Homology CDS 52334 54091 . + 0 ID=cds-WP_101457225.1;Parent=gene-CYJ01_RS02995;Dbxref=GenBank:WP_101457225.1;Name=WP_101457225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=CYJ01_RS02995;product=ATP-binding protein;protein_id=WP_101457225.1;transl_table=11 NZ_PJUR01000005.1 cmsearch riboswitch 54247 54385 . + . ID=id-NZ_PJUR01000005.1:54247..54385;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000005.1 RefSeq gene 54451 54996 . + . ID=gene-CYJ01_RS03000;Name=CYJ01_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03000;old_locus_tag=CYJ01_03000 NZ_PJUR01000005.1 Protein Homology CDS 54451 54996 . + 0 ID=cds-WP_014613874.1;Parent=gene-CYJ01_RS03000;Dbxref=GenBank:WP_014613874.1;Name=WP_014613874.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168748.1;locus_tag=CYJ01_RS03000;product=ECF transporter S component;protein_id=WP_014613874.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 55259 55507 . - . ID=gene-CYJ01_RS03005;Name=CYJ01_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03005;old_locus_tag=CYJ01_03005 NZ_PJUR01000005.1 Protein Homology CDS 55259 55507 . - 0 ID=cds-WP_014613875.1;Parent=gene-CYJ01_RS03005;Dbxref=GenBank:WP_014613875.1;Name=WP_014613875.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CYJ01_RS03005;product=ferredoxin;protein_id=WP_014613875.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 55609 56556 . + . ID=gene-CYJ01_RS03010;Name=CYJ01_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03010;old_locus_tag=CYJ01_03010 NZ_PJUR01000005.1 Protein Homology CDS 55609 56556 . + 0 ID=cds-WP_037542991.1;Parent=gene-CYJ01_RS03010;Dbxref=GenBank:WP_037542991.1;Name=WP_037542991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165280.1;locus_tag=CYJ01_RS03010;product=helix-turn-helix domain-containing protein;protein_id=WP_037542991.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 56549 57925 . + . ID=gene-CYJ01_RS03015;Name=CYJ01_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03015;old_locus_tag=CYJ01_03015 NZ_PJUR01000005.1 Protein Homology CDS 56549 57925 . + 0 ID=cds-WP_037542994.1;Parent=gene-CYJ01_RS03015;Dbxref=GenBank:WP_037542994.1;Name=WP_037542994.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165281.1;locus_tag=CYJ01_RS03015;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_037542994.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 58100 59455 . + . ID=gene-CYJ01_RS03020;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=CYJ01_RS03020;old_locus_tag=CYJ01_03020 NZ_PJUR01000005.1 Protein Homology CDS 58100 59455 . + 0 ID=cds-WP_101457226.1;Parent=gene-CYJ01_RS03020;Dbxref=GenBank:WP_101457226.1;Name=WP_101457226.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729142.1;locus_tag=CYJ01_RS03020;product=elastin-binding protein EbpS;protein_id=WP_101457226.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 59701 60687 . + . ID=gene-CYJ01_RS03025;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03025;old_locus_tag=CYJ01_03025 NZ_PJUR01000005.1 Protein Homology CDS 59701 60687 . + 0 ID=cds-WP_014613879.1;Parent=gene-CYJ01_RS03025;Dbxref=GenBank:WP_014613879.1;Name=WP_014613879.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CYJ01_RS03025;product=bacillithiol disulfide reductase YpdA;protein_id=WP_014613879.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 60984 61952 . - . ID=gene-CYJ01_RS03030;Name=CYJ01_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03030;old_locus_tag=CYJ01_03030 NZ_PJUR01000005.1 Protein Homology CDS 60984 61952 . - 0 ID=cds-WP_015729141.1;Parent=gene-CYJ01_RS03030;Dbxref=GenBank:WP_015729141.1;Name=WP_015729141.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=CYJ01_RS03030;product=asparaginase;protein_id=WP_015729141.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 62026 62685 . + . ID=gene-CYJ01_RS03035;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CYJ01_RS03035;old_locus_tag=CYJ01_03035 NZ_PJUR01000005.1 Protein Homology CDS 62026 62685 . + 0 ID=cds-WP_014613881.1;Parent=gene-CYJ01_RS03035;Dbxref=GenBank:WP_014613881.1;Name=WP_014613881.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613881.1;locus_tag=CYJ01_RS03035;product=(d)CMP kinase;protein_id=WP_014613881.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 62774 63958 . + . ID=gene-CYJ01_RS03040;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03040;old_locus_tag=CYJ01_03040 NZ_PJUR01000005.1 Protein Homology CDS 62774 63958 . + 0 ID=cds-WP_014613882.1;Parent=gene-CYJ01_RS03040;Dbxref=GenBank:WP_014613882.1;Name=WP_014613882.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729140.1;locus_tag=CYJ01_RS03040;product=30S ribosomal protein S1;protein_id=WP_014613882.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 64325 65635 . + . ID=gene-CYJ01_RS03045;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CYJ01_RS03045;old_locus_tag=CYJ01_03045 NZ_PJUR01000005.1 Protein Homology CDS 64325 65635 . + 0 ID=cds-WP_101457227.1;Parent=gene-CYJ01_RS03045;Dbxref=GenBank:WP_101457227.1;Name=WP_101457227.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CYJ01_RS03045;product=ribosome biogenesis GTPase Der;protein_id=WP_101457227.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 65651 66649 . + . ID=gene-CYJ01_RS03050;Name=CYJ01_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03050;old_locus_tag=CYJ01_03050 NZ_PJUR01000005.1 Protein Homology CDS 65651 66649 . + 0 ID=cds-WP_014613884.1;Parent=gene-CYJ01_RS03050;Dbxref=GenBank:WP_014613884.1;Name=WP_014613884.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275732.1;locus_tag=CYJ01_RS03050;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_014613884.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 66820 67092 . + . ID=gene-CYJ01_RS03055;Name=CYJ01_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03055;old_locus_tag=CYJ01_03055 NZ_PJUR01000005.1 Protein Homology CDS 66820 67092 . + 0 ID=cds-WP_014613885.1;Parent=gene-CYJ01_RS03055;Dbxref=GenBank:WP_014613885.1;Name=WP_014613885.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CYJ01_RS03055;product=HU family DNA-binding protein;protein_id=WP_014613885.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 67568 68137 . + . ID=gene-CYJ01_RS03060;Name=CYJ01_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03060;old_locus_tag=CYJ01_03060 NZ_PJUR01000005.1 Protein Homology CDS 67568 68137 . + 0 ID=cds-WP_101457228.1;Parent=gene-CYJ01_RS03060;Dbxref=GenBank:WP_101457228.1;Name=WP_101457228.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613886.1;locus_tag=CYJ01_RS03060;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_101457228.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 68147 68860 . + . ID=gene-CYJ01_RS03065;Name=CYJ01_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03065;old_locus_tag=CYJ01_03065 NZ_PJUR01000005.1 Protein Homology CDS 68147 68860 . + 0 ID=cds-WP_020219613.1;Parent=gene-CYJ01_RS03065;Dbxref=GenBank:WP_020219613.1;Name=WP_020219613.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613887.1;locus_tag=CYJ01_RS03065;product=demethylmenaquinone methyltransferase;protein_id=WP_020219613.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 68878 69834 . + . ID=gene-CYJ01_RS03070;Name=CYJ01_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03070;old_locus_tag=CYJ01_03070 NZ_PJUR01000005.1 Protein Homology CDS 68878 69834 . + 0 ID=cds-WP_014613888.1;Parent=gene-CYJ01_RS03070;Dbxref=GenBank:WP_014613888.1;Name=WP_014613888.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=CYJ01_RS03070;product=polyprenyl synthetase family protein;protein_id=WP_014613888.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 69916 70368 . + . ID=gene-CYJ01_RS03075;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CYJ01_RS03075;old_locus_tag=CYJ01_03075 NZ_PJUR01000005.1 Protein Homology CDS 69916 70368 . + 0 ID=cds-WP_101457229.1;Parent=gene-CYJ01_RS03075;Dbxref=GenBank:WP_101457229.1;Name=WP_101457229.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165294.1;locus_tag=CYJ01_RS03075;product=nucleoside-diphosphate kinase;protein_id=WP_101457229.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 70647 71813 . + . ID=gene-CYJ01_RS03080;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03080;old_locus_tag=CYJ01_03080 NZ_PJUR01000005.1 Protein Homology CDS 70647 71813 . + 0 ID=cds-WP_037544222.1;Parent=gene-CYJ01_RS03080;Dbxref=GenBank:WP_037544222.1;Name=WP_037544222.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=CYJ01_RS03080;product=chorismate synthase;protein_id=WP_037544222.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 71830 72903 . + . ID=gene-CYJ01_RS03085;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03085;old_locus_tag=CYJ01_03085 NZ_PJUR01000005.1 Protein Homology CDS 71830 72903 . + 0 ID=cds-WP_070407434.1;Parent=gene-CYJ01_RS03085;Dbxref=GenBank:WP_070407434.1;Name=WP_070407434.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=CYJ01_RS03085;product=3-dehydroquinate synthase;protein_id=WP_070407434.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 72904 74193 . + . ID=gene-CYJ01_RS03090;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03090;old_locus_tag=CYJ01_03090 NZ_PJUR01000005.1 Protein Homology CDS 72904 74193 . + 0 ID=cds-WP_065354221.1;Parent=gene-CYJ01_RS03090;Dbxref=GenBank:WP_065354221.1;Name=WP_065354221.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=CYJ01_RS03090;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_065354221.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 74195 75436 . + . ID=gene-CYJ01_RS03095;Name=CYJ01_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03095;old_locus_tag=CYJ01_03095 NZ_PJUR01000005.1 Protein Homology CDS 74195 75436 . + 0 ID=cds-WP_014613893.1;Parent=gene-CYJ01_RS03095;Dbxref=GenBank:WP_014613893.1;Name=WP_014613893.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=CYJ01_RS03095;product=tetratricopeptide repeat protein;protein_id=WP_014613893.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 75448 75669 . + . ID=gene-CYJ01_RS12410;Name=CYJ01_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12410 NZ_PJUR01000005.1 Protein Homology CDS 75448 75669 . + 0 ID=cds-WP_274539887.1;Parent=gene-CYJ01_RS12410;Dbxref=GenBank:WP_274539887.1;Name=WP_274539887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=CYJ01_RS12410;product=YpiB family protein;protein_id=WP_274539887.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 75572 76006 . + . ID=gene-CYJ01_RS03100;Name=CYJ01_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03100;old_locus_tag=CYJ01_03100 NZ_PJUR01000005.1 Protein Homology CDS 75572 76006 . + 0 ID=cds-WP_274539888.1;Parent=gene-CYJ01_RS03100;Dbxref=GenBank:WP_274539888.1;Name=WP_274539888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=CYJ01_RS03100;product=YpiB family protein;protein_id=WP_274539888.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 76035 76628 . + . ID=gene-CYJ01_RS03105;Name=CYJ01_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03105;old_locus_tag=CYJ01_03105 NZ_PJUR01000005.1 Protein Homology CDS 76035 76628 . + 0 ID=cds-WP_014613895.1;Parent=gene-CYJ01_RS03105;Dbxref=GenBank:WP_014613895.1;Name=WP_014613895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613895.1;locus_tag=CYJ01_RS03105;product=DUF1405 domain-containing protein;protein_id=WP_014613895.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 76667 77365 . + . ID=gene-CYJ01_RS03110;Name=CYJ01_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03110;old_locus_tag=CYJ01_03110 NZ_PJUR01000005.1 Protein Homology CDS 76667 77365 . + 0 ID=cds-WP_014613896.1;Parent=gene-CYJ01_RS03110;Dbxref=GenBank:WP_014613896.1;Name=WP_014613896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613896.1;locus_tag=CYJ01_RS03110;product=zinc metallopeptidase;protein_id=WP_014613896.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 77544 77867 . + . ID=gene-CYJ01_RS03115;Name=CYJ01_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03115;old_locus_tag=CYJ01_03115 NZ_PJUR01000005.1 Protein Homology CDS 77544 77867 . + 0 ID=cds-WP_014613897.1;Parent=gene-CYJ01_RS03115;Dbxref=GenBank:WP_014613897.1;Name=WP_014613897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167611.1;locus_tag=CYJ01_RS03115;product=nucleotide pyrophosphohydrolase;protein_id=WP_014613897.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 77883 79007 . + . ID=gene-CYJ01_RS03120;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03120;old_locus_tag=CYJ01_03120 NZ_PJUR01000005.1 Protein Homology CDS 77883 79007 . + 0 ID=cds-WP_101457230.1;Parent=gene-CYJ01_RS03120;Dbxref=GenBank:WP_101457230.1;Name=WP_101457230.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165302.1;locus_tag=CYJ01_RS03120;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_101457230.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 79011 80213 . + . ID=gene-CYJ01_RS03125;Name=CYJ01_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03125;old_locus_tag=CYJ01_03125 NZ_PJUR01000005.1 Protein Homology CDS 79011 80213 . + 0 ID=cds-WP_101457231.1;Parent=gene-CYJ01_RS03125;Dbxref=GenBank:WP_101457231.1;Name=WP_101457231.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219610.1;locus_tag=CYJ01_RS03125;product=CCA tRNA nucleotidyltransferase;protein_id=WP_101457231.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 80197 81168 . + . ID=gene-CYJ01_RS03130;Name=CYJ01_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03130;old_locus_tag=CYJ01_03130 NZ_PJUR01000005.1 Protein Homology CDS 80197 81168 . + 0 ID=cds-WP_101457232.1;Parent=gene-CYJ01_RS03130;Dbxref=GenBank:WP_101457232.1;Name=WP_101457232.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165304.1;locus_tag=CYJ01_RS03130;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_101457232.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 81196 83898 . + . ID=gene-CYJ01_RS03135;Name=CYJ01_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03135;old_locus_tag=CYJ01_03135 NZ_PJUR01000005.1 Protein Homology CDS 81196 83898 . + 0 ID=cds-WP_101457233.1;Parent=gene-CYJ01_RS03135;Dbxref=GenBank:WP_101457233.1;Name=WP_101457233.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729132.1;locus_tag=CYJ01_RS03135;product=helicase C-terminal domain-containing protein;protein_id=WP_101457233.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 83966 85258 . + . ID=gene-CYJ01_RS03140;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CYJ01_RS03140;old_locus_tag=CYJ01_03140 NZ_PJUR01000005.1 Protein Homology CDS 83966 85258 . + 0 ID=cds-WP_101457234.1;Parent=gene-CYJ01_RS03140;Dbxref=GenBank:WP_101457234.1;Name=WP_101457234.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=CYJ01_RS03140;product=asparagine--tRNA ligase;protein_id=WP_101457234.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 85433 86125 . + . ID=gene-CYJ01_RS03145;Name=CYJ01_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03145;old_locus_tag=CYJ01_03145 NZ_PJUR01000005.1 Protein Homology CDS 85433 86125 . + 0 ID=cds-WP_101457235.1;Parent=gene-CYJ01_RS03145;Dbxref=GenBank:WP_101457235.1;Name=WP_101457235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=CYJ01_RS03145;product=DnaD domain-containing protein;protein_id=WP_101457235.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 86115 86789 . + . ID=gene-CYJ01_RS03150;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CYJ01_RS03150;old_locus_tag=CYJ01_03150 NZ_PJUR01000005.1 Protein Homology CDS 86115 86789 . + 0 ID=cds-WP_014613904.1;Parent=gene-CYJ01_RS03150;Dbxref=GenBank:WP_014613904.1;Name=WP_014613904.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=CYJ01_RS03150;product=endonuclease III;protein_id=WP_014613904.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 86786 87121 . + . ID=gene-CYJ01_RS03155;Name=CYJ01_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03155;old_locus_tag=CYJ01_03155 NZ_PJUR01000005.1 Protein Homology CDS 86786 87121 . + 0 ID=cds-WP_014613905.1;Parent=gene-CYJ01_RS03155;Dbxref=GenBank:WP_014613905.1;Name=WP_014613905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613905.1;locus_tag=CYJ01_RS03155;product=YpoC family protein;protein_id=WP_014613905.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 87804 90026 . - . ID=gene-CYJ01_RS03160;Name=CYJ01_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03160;old_locus_tag=CYJ01_03160 NZ_PJUR01000005.1 Protein Homology CDS 87804 90026 . - 0 ID=cds-WP_014613906.1;Parent=gene-CYJ01_RS03160;Dbxref=GenBank:WP_014613906.1;Name=WP_014613906.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165310.1;locus_tag=CYJ01_RS03160;product=transglycosylase domain-containing protein;protein_id=WP_014613906.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 90023 90649 . - . ID=gene-CYJ01_RS03165;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=CYJ01_RS03165;old_locus_tag=CYJ01_03165 NZ_PJUR01000005.1 Protein Homology CDS 90023 90649 . - 0 ID=cds-WP_014613907.1;Parent=gene-CYJ01_RS03165;Dbxref=GenBank:WP_014613907.1;Name=WP_014613907.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=CYJ01_RS03165;product=Holliday junction resolvase RecU;protein_id=WP_014613907.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 90845 91186 . + . ID=gene-CYJ01_RS03170;Name=CYJ01_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03170;old_locus_tag=CYJ01_03170 NZ_PJUR01000005.1 Protein Homology CDS 90845 91186 . + 0 ID=cds-WP_101457236.1;Parent=gene-CYJ01_RS03170;Dbxref=GenBank:WP_101457236.1;Name=WP_101457236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613908.1;locus_tag=CYJ01_RS03170;product=DUF1798 family protein;protein_id=WP_101457236.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 91179 91736 . + . ID=gene-CYJ01_RS03175;Name=CYJ01_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03175;old_locus_tag=CYJ01_03175 NZ_PJUR01000005.1 Protein Homology CDS 91179 91736 . + 0 ID=cds-WP_101457237.1;Parent=gene-CYJ01_RS03175;Dbxref=GenBank:WP_101457237.1;Name=WP_101457237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165313.1;locus_tag=CYJ01_RS03175;product=SLOG family protein;protein_id=WP_101457237.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 91756 92091 . + . ID=gene-CYJ01_RS03180;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03180;old_locus_tag=CYJ01_03180 NZ_PJUR01000005.1 Protein Homology CDS 91756 92091 . + 0 ID=cds-WP_014613910.1;Parent=gene-CYJ01_RS03180;Dbxref=GenBank:WP_014613910.1;Name=WP_014613910.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CYJ01_RS03180;product=cell division regulator GpsB;protein_id=WP_014613910.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 92133 92519 . + . ID=gene-CYJ01_RS03185;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CYJ01_RS03185;old_locus_tag=CYJ01_03185 NZ_PJUR01000005.1 cmsearch RNase_P_RNA 92133 92519 . + . ID=rna-CYJ01_RS03185;Parent=gene-CYJ01_RS03185;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS03185;product=RNase P RNA component class B NZ_PJUR01000005.1 cmsearch exon 92133 92519 . + . ID=exon-CYJ01_RS03185-1;Parent=rna-CYJ01_RS03185;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS03185;product=RNase P RNA component class B NZ_PJUR01000005.1 RefSeq gene 92800 93927 . + . ID=gene-CYJ01_RS03190;Name=CYJ01_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03190;old_locus_tag=CYJ01_03190 NZ_PJUR01000005.1 Protein Homology CDS 92800 93927 . + 0 ID=cds-WP_101457238.1;Parent=gene-CYJ01_RS03190;Dbxref=GenBank:WP_101457238.1;Name=WP_101457238.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219607.1;locus_tag=CYJ01_RS03190;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_101457238.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 93961 94878 . + . ID=gene-CYJ01_RS03195;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CYJ01_RS03195;old_locus_tag=CYJ01_03195 NZ_PJUR01000005.1 Protein Homology CDS 93961 94878 . + 0 ID=cds-WP_096636491.1;Parent=gene-CYJ01_RS03195;Dbxref=GenBank:WP_096636491.1;Name=WP_096636491.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165315.1;locus_tag=CYJ01_RS03195;product=EamA family transporter RarD;protein_id=WP_096636491.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 95042 98497 . + . ID=gene-CYJ01_RS03200;Name=CYJ01_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03200;old_locus_tag=CYJ01_03200 NZ_PJUR01000005.1 Protein Homology CDS 95042 98497 . + 0 ID=cds-WP_101457239.1;Parent=gene-CYJ01_RS03200;Dbxref=GenBank:WP_101457239.1;Name=WP_101457239.1;Ontology_term=GO:0003924,GO:0005525,GO:0008289;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=CYJ01_RS03200;product=dynamin family protein;protein_id=WP_101457239.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 98502 99383 . + . ID=gene-CYJ01_RS03205;Name=CYJ01_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03205;old_locus_tag=CYJ01_03205 NZ_PJUR01000005.1 Protein Homology CDS 98502 99383 . + 0 ID=cds-WP_015729127.1;Parent=gene-CYJ01_RS03205;Dbxref=GenBank:WP_015729127.1;Name=WP_015729127.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729127.1;locus_tag=CYJ01_RS03205;product=5'-3' exonuclease;protein_id=WP_015729127.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 99513 99911 . - . ID=gene-CYJ01_RS03210;Name=CYJ01_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03210;old_locus_tag=CYJ01_03210 NZ_PJUR01000005.1 Protein Homology CDS 99513 99911 . - 0 ID=cds-WP_101457240.1;Parent=gene-CYJ01_RS03210;Dbxref=GenBank:WP_101457240.1;Name=WP_101457240.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219606.1;locus_tag=CYJ01_RS03210;product=ribonuclease HI family protein;protein_id=WP_101457240.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 99967 100665 . - . ID=gene-CYJ01_RS03215;Name=CYJ01_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03215;old_locus_tag=CYJ01_03215 NZ_PJUR01000005.1 Protein Homology CDS 99967 100665 . - 0 ID=cds-WP_014613916.1;Parent=gene-CYJ01_RS03215;Dbxref=GenBank:WP_014613916.1;Name=WP_014613916.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167630.1;locus_tag=CYJ01_RS03215;product=queuosine precursor transporter;protein_id=WP_014613916.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 100891 101076 . + . ID=gene-CYJ01_RS03220;Name=CYJ01_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03220;old_locus_tag=CYJ01_03220 NZ_PJUR01000005.1 Protein Homology CDS 100891 101076 . + 0 ID=cds-WP_014613917.1;Parent=gene-CYJ01_RS03220;Dbxref=GenBank:WP_014613917.1;Name=WP_014613917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=CYJ01_RS03220;product=zinc-finger domain-containing protein;protein_id=WP_014613917.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 101108 102226 . + . ID=gene-CYJ01_RS03225;Name=CYJ01_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03225;old_locus_tag=CYJ01_03225 NZ_PJUR01000005.1 Protein Homology CDS 101108 102226 . + 0 ID=cds-WP_014613918.1;Parent=gene-CYJ01_RS03225;Dbxref=GenBank:WP_014613918.1;Name=WP_014613918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165321.1;locus_tag=CYJ01_RS03225;product=conserved virulence factor C family protein;protein_id=WP_014613918.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 102251 102691 . + . ID=gene-CYJ01_RS03230;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03230;old_locus_tag=CYJ01_03230 NZ_PJUR01000005.1 Protein Homology CDS 102251 102691 . + 0 ID=cds-WP_070407439.1;Parent=gene-CYJ01_RS03230;Dbxref=GenBank:WP_070407439.1;Name=WP_070407439.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=CYJ01_RS03230;product=bacilliredoxin BrxA;protein_id=WP_070407439.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 103498 104451 . + . ID=gene-CYJ01_RS03235;Name=CYJ01_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03235;old_locus_tag=CYJ01_03235 NZ_PJUR01000005.1 Protein Homology CDS 103498 104451 . + 0 ID=cds-WP_014613920.1;Parent=gene-CYJ01_RS03235;Dbxref=GenBank:WP_014613920.1;Name=WP_014613920.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=CYJ01_RS03235;product=thymidylate synthase;protein_id=WP_014613920.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 104470 104949 . + . ID=gene-CYJ01_RS03240;Name=CYJ01_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03240;old_locus_tag=CYJ01_03240 NZ_PJUR01000005.1 Protein Homology CDS 104470 104949 . + 0 ID=cds-WP_015729124.1;Parent=gene-CYJ01_RS03240;Dbxref=GenBank:WP_015729124.1;Name=WP_015729124.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=CYJ01_RS03240;product=dihydrofolate reductase;protein_id=WP_015729124.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 104968 105822 . + . ID=gene-CYJ01_RS03245;Name=CYJ01_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03245;old_locus_tag=CYJ01_03245 NZ_PJUR01000005.1 Protein Homology CDS 104968 105822 . + 0 ID=cds-WP_014613922.1;Parent=gene-CYJ01_RS03245;Dbxref=GenBank:WP_014613922.1;Name=WP_014613922.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=CYJ01_RS03245;product=DegV family protein;protein_id=WP_014613922.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 105840 106364 . + . ID=gene-CYJ01_RS03250;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03250;old_locus_tag=CYJ01_03250 NZ_PJUR01000005.1 Protein Homology CDS 105840 106364 . + 0 ID=cds-WP_101457241.1;Parent=gene-CYJ01_RS03250;Dbxref=GenBank:WP_101457241.1;Name=WP_101457241.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165326.1;locus_tag=CYJ01_RS03250;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_101457241.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 106361 106789 . + . ID=gene-CYJ01_RS03255;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03255;old_locus_tag=CYJ01_03255 NZ_PJUR01000005.1 Protein Homology CDS 106361 106789 . + 0 ID=cds-WP_014613924.1;Parent=gene-CYJ01_RS03255;Dbxref=GenBank:WP_014613924.1;Name=WP_014613924.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=CYJ01_RS03255;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_014613924.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 106803 107303 . + . ID=gene-CYJ01_RS03260;Name=CYJ01_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03260;old_locus_tag=CYJ01_03260 NZ_PJUR01000005.1 Protein Homology CDS 106803 107303 . + 0 ID=cds-WP_014613925.1;Parent=gene-CYJ01_RS03260;Dbxref=GenBank:WP_014613925.1;Name=WP_014613925.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=CYJ01_RS03260;product=PTS sugar transporter subunit IIA;protein_id=WP_014613925.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 107303 107524 . + . ID=gene-CYJ01_RS03265;Name=CYJ01_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03265;old_locus_tag=CYJ01_03265 NZ_PJUR01000005.1 Protein Homology CDS 107303 107524 . + 0 ID=cds-WP_014613926.1;Parent=gene-CYJ01_RS03265;Dbxref=GenBank:WP_014613926.1;Name=WP_014613926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=CYJ01_RS03265;product=YozE family protein;protein_id=WP_014613926.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 107647 109104 . + . ID=gene-CYJ01_RS03270;Name=CYJ01_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03270;old_locus_tag=CYJ01_03270 NZ_PJUR01000005.1 Protein Homology CDS 107647 109104 . + 0 ID=cds-WP_063284467.1;Parent=gene-CYJ01_RS03270;Dbxref=GenBank:WP_063284467.1;Name=WP_063284467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342169.1;locus_tag=CYJ01_RS03270;product=S41 family peptidase;protein_id=WP_063284467.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 109104 109619 . + . ID=gene-CYJ01_RS03275;Name=CYJ01_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03275;old_locus_tag=CYJ01_03275 NZ_PJUR01000005.1 Protein Homology CDS 109104 109619 . + 0 ID=cds-WP_020219604.1;Parent=gene-CYJ01_RS03275;Dbxref=GenBank:WP_020219604.1;Name=WP_020219604.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167642.1;locus_tag=CYJ01_RS03275;product=GNAT family N-acetyltransferase;protein_id=WP_020219604.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 109629 110714 . + . ID=gene-CYJ01_RS03280;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CYJ01_RS03280;old_locus_tag=CYJ01_03280 NZ_PJUR01000005.1 Protein Homology CDS 109629 110714 . + 0 ID=cds-WP_015729120.1;Parent=gene-CYJ01_RS03280;Dbxref=GenBank:WP_015729120.1;Name=WP_015729120.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729120.1;locus_tag=CYJ01_RS03280;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_015729120.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 110711 111334 . + . ID=gene-CYJ01_RS03285;Name=CYJ01_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03285;old_locus_tag=CYJ01_03285 NZ_PJUR01000005.1 Protein Homology CDS 110711 111334 . + 0 ID=cds-WP_014613930.1;Parent=gene-CYJ01_RS03285;Dbxref=GenBank:WP_014613930.1;Name=WP_014613930.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729119.1;locus_tag=CYJ01_RS03285;product=phosphatase PAP2 family protein;protein_id=WP_014613930.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 111830 112507 . + . ID=gene-CYJ01_RS03290;Name=CYJ01_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03290;old_locus_tag=CYJ01_03290 NZ_PJUR01000005.1 Protein Homology CDS 111830 112507 . + 0 ID=cds-WP_014613931.1;Parent=gene-CYJ01_RS03290;Dbxref=GenBank:WP_014613931.1;Name=WP_014613931.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=CYJ01_RS03290;product=response regulator transcription factor;protein_id=WP_014613931.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 112504 113871 . + . ID=gene-CYJ01_RS03295;Name=CYJ01_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03295;old_locus_tag=CYJ01_03295 NZ_PJUR01000005.1 Protein Homology CDS 112504 113871 . + 0 ID=cds-WP_065354228.1;Parent=gene-CYJ01_RS03295;Dbxref=GenBank:WP_065354228.1;Name=WP_065354228.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729118.1;locus_tag=CYJ01_RS03295;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_065354228.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 113966 116752 . + . ID=gene-CYJ01_RS03300;Name=CYJ01_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03300;old_locus_tag=CYJ01_03300 NZ_PJUR01000005.1 Protein Homology CDS 113966 116752 . + 0 ID=cds-WP_101457242.1;Parent=gene-CYJ01_RS03300;Dbxref=GenBank:WP_101457242.1;Name=WP_101457242.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=CYJ01_RS03300;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_101457242.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 116767 118044 . + . ID=gene-CYJ01_RS03305;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03305;old_locus_tag=CYJ01_03305 NZ_PJUR01000005.1 Protein Homology CDS 116767 118044 . + 0 ID=cds-WP_015729116.1;Parent=gene-CYJ01_RS03305;Dbxref=GenBank:WP_015729116.1;Name=WP_015729116.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729116.1;locus_tag=CYJ01_RS03305;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_015729116.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 118243 118482 . + . ID=gene-CYJ01_RS03310;Name=CYJ01_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03310;old_locus_tag=CYJ01_03310 NZ_PJUR01000005.1 Protein Homology CDS 118243 118482 . + 0 ID=cds-WP_014613935.1;Parent=gene-CYJ01_RS03310;Dbxref=GenBank:WP_014613935.1;Name=WP_014613935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219603.1;locus_tag=CYJ01_RS03310;product=hypothetical protein;protein_id=WP_014613935.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 118547 119371 . + . ID=gene-CYJ01_RS03315;Name=CYJ01_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03315;old_locus_tag=CYJ01_03315 NZ_PJUR01000005.1 Protein Homology CDS 118547 119371 . + 0 ID=cds-WP_101457243.1;Parent=gene-CYJ01_RS03315;Dbxref=GenBank:WP_101457243.1;Name=WP_101457243.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613936.1;locus_tag=CYJ01_RS03315;product=VOC family protein;protein_id=WP_101457243.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 119375 119578 . + . ID=gene-CYJ01_RS03320;Name=CYJ01_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03320;old_locus_tag=CYJ01_03320 NZ_PJUR01000005.1 Protein Homology CDS 119375 119578 . + 0 ID=cds-WP_014613937.1;Parent=gene-CYJ01_RS03320;Dbxref=GenBank:WP_014613937.1;Name=WP_014613937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=CYJ01_RS03320;product=DUF6501 family protein;protein_id=WP_014613937.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 119676 120473 . + . ID=gene-CYJ01_RS03325;Name=CYJ01_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03325;old_locus_tag=CYJ01_03325 NZ_PJUR01000005.1 Protein Homology CDS 119676 120473 . + 0 ID=cds-WP_014613938.1;Parent=gene-CYJ01_RS03325;Dbxref=GenBank:WP_014613938.1;Name=WP_014613938.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=CYJ01_RS03325;product=ATP-binding protein;protein_id=WP_014613938.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 120485 122374 . + . ID=gene-CYJ01_RS03330;Name=CYJ01_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03330;old_locus_tag=CYJ01_03330 NZ_PJUR01000005.1 Protein Homology CDS 120485 122374 . + 0 ID=cds-WP_101457244.1;Parent=gene-CYJ01_RS03330;Dbxref=GenBank:WP_101457244.1;Name=WP_101457244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495031.1;locus_tag=CYJ01_RS03330;product=vWA domain-containing protein;protein_id=WP_101457244.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 122493 123839 . + . ID=gene-CYJ01_RS03335;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=CYJ01_RS03335;old_locus_tag=CYJ01_03335 NZ_PJUR01000005.1 Protein Homology CDS 122493 123839 . + 0 ID=cds-WP_015729113.1;Parent=gene-CYJ01_RS03335;Dbxref=GenBank:WP_015729113.1;Name=WP_015729113.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CYJ01_RS03335;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_015729113.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 123983 124180 . + . ID=gene-CYJ01_RS11930;Name=CYJ01_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11930 NZ_PJUR01000005.1 Protein Homology CDS 123983 124180 . + 0 ID=cds-WP_110144899.1;Parent=gene-CYJ01_RS11930;Dbxref=GenBank:WP_110144899.1;Name=WP_110144899.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ01_RS11930;product=BCCT family transporter;protein_id=WP_110144899.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 124196 124411 . + . ID=gene-CYJ01_RS11935;Name=CYJ01_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11935 NZ_PJUR01000005.1 Protein Homology CDS 124196 124411 . + 0 ID=cds-WP_037543060.1;Parent=gene-CYJ01_RS11935;Dbxref=GenBank:WP_037543060.1;Name=WP_037543060.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ01_RS11935;product=BCCT family transporter;protein_id=WP_037543060.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 124646 125812 . - . ID=gene-CYJ01_RS03345;Name=CYJ01_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03345;old_locus_tag=CYJ01_03345 NZ_PJUR01000005.1 Protein Homology CDS 124646 125812 . - 0 ID=cds-WP_101457245.1;Parent=gene-CYJ01_RS03345;Dbxref=GenBank:WP_101457245.1;Name=WP_101457245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613941.1;locus_tag=CYJ01_RS03345;product=toxic anion resistance protein;protein_id=WP_101457245.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 125809 126447 . - . ID=gene-CYJ01_RS03350;Name=CYJ01_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03350;old_locus_tag=CYJ01_03350 NZ_PJUR01000005.1 Protein Homology CDS 125809 126447 . - 0 ID=cds-WP_014613942.1;Parent=gene-CYJ01_RS03350;Dbxref=GenBank:WP_014613942.1;Name=WP_014613942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165344.1;locus_tag=CYJ01_RS03350;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_014613942.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 126460 126732 . - . ID=gene-CYJ01_RS03355;Name=CYJ01_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03355;old_locus_tag=CYJ01_03355 NZ_PJUR01000005.1 Protein Homology CDS 126460 126732 . - 0 ID=cds-WP_101457246.1;Parent=gene-CYJ01_RS03355;Dbxref=GenBank:WP_101457246.1;Name=WP_101457246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167657.1;locus_tag=CYJ01_RS03355;product=acylphosphatase;protein_id=WP_101457246.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 126891 127199 . + . ID=gene-CYJ01_RS03360;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03360;old_locus_tag=CYJ01_03360 NZ_PJUR01000005.1 Protein Homology CDS 126891 127199 . + 0 ID=cds-WP_014613944.1;Parent=gene-CYJ01_RS03360;Dbxref=GenBank:WP_014613944.1;Name=WP_014613944.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=CYJ01_RS03360;product=regulatory protein MsaA;protein_id=WP_014613944.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 127392 127592 . + . ID=gene-CYJ01_RS03365;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=CYJ01_RS03365;old_locus_tag=CYJ01_03365 NZ_PJUR01000005.1 Protein Homology CDS 127392 127592 . + 0 ID=cds-WP_014613945.1;Parent=gene-CYJ01_RS03365;Dbxref=GenBank:WP_014613945.1;Name=WP_014613945.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CYJ01_RS03365;product=cold shock protein CspA;protein_id=WP_014613945.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 128132 128311 . + . ID=gene-CYJ01_RS03370;Name=CYJ01_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03370;old_locus_tag=CYJ01_03370 NZ_PJUR01000005.1 Protein Homology CDS 128132 128311 . + 0 ID=cds-WP_070407448.1;Parent=gene-CYJ01_RS03370;Dbxref=GenBank:WP_070407448.1;Name=WP_070407448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729109.1;locus_tag=CYJ01_RS03370;product=hypothetical protein;protein_id=WP_070407448.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 128433 129698 . - . ID=gene-CYJ01_RS03375;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03375;old_locus_tag=CYJ01_03375 NZ_PJUR01000005.1 Protein Homology CDS 128433 129698 . - 0 ID=cds-WP_101457247.1;Parent=gene-CYJ01_RS03375;Dbxref=GenBank:WP_101457247.1;Name=WP_101457247.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=CYJ01_RS03375;product=diaminopimelate decarboxylase;protein_id=WP_101457247.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 129699 130778 . - . ID=gene-CYJ01_RS03380;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ01_RS03380;old_locus_tag=CYJ01_03380 NZ_PJUR01000005.1 Protein Homology CDS 129699 130778 . - 0 ID=cds-WP_101457248.1;Parent=gene-CYJ01_RS03380;Dbxref=GenBank:WP_101457248.1;Name=WP_101457248.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729107.1;locus_tag=CYJ01_RS03380;product=alanine racemase;protein_id=WP_101457248.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 130775 131929 . - . ID=gene-CYJ01_RS03385;Name=CYJ01_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03385;old_locus_tag=CYJ01_03385 NZ_PJUR01000005.1 Protein Homology CDS 130775 131929 . - 0 ID=cds-WP_014613950.1;Parent=gene-CYJ01_RS03385;Dbxref=GenBank:WP_014613950.1;Name=WP_014613950.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613950.1;locus_tag=CYJ01_RS03385;product=M20 metallopeptidase family protein;protein_id=WP_014613950.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 132114 132833 . - . ID=gene-CYJ01_RS03390;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CYJ01_RS03390;old_locus_tag=CYJ01_03390 NZ_PJUR01000005.1 Protein Homology CDS 132114 132833 . - 0 ID=cds-WP_014613951.1;Parent=gene-CYJ01_RS03390;Dbxref=GenBank:WP_014613951.1;Name=WP_014613951.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613951.1;locus_tag=CYJ01_RS03390;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_014613951.1;transl_table=11 NZ_PJUR01000005.1 RefSeq gene 132853 133264 . - . ID=gene-CYJ01_RS03395;Name=dapB;end_range=133264,.;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03395;old_locus_tag=CYJ01_03395;partial=true NZ_PJUR01000005.1 Protein Homology CDS 132853 133264 . - 1 ID=cds-WP_101457249.1;Parent=gene-CYJ01_RS03395;Dbxref=GenBank:WP_101457249.1;Name=WP_101457249.1;Ontology_term=GO:0009085,GO:0008839;end_range=133264,.;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275807.1;locus_tag=CYJ01_RS03395;partial=true;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_101457249.1;transl_table=11 ##sequence-region NZ_PJUR01000050.1 1 7948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000050.1 RefSeq region 1 7948 . + . ID=NZ_PJUR01000050.1:1..7948;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000050.1 RefSeq gene 1 673 . + . ID=gene-CYJ01_RS12030;Name=CYJ01_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12030;old_locus_tag=CYJ01_11220;partial=true;start_range=.,1 NZ_PJUR01000050.1 GeneMarkS-2+ CDS 1 673 . + 1 ID=cds-WP_198588001.1;Parent=gene-CYJ01_RS12030;Dbxref=GenBank:WP_198588001.1;Name=WP_198588001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12030;partial=true;product=hypothetical protein;protein_id=WP_198588001.1;start_range=.,1;transl_table=11 NZ_PJUR01000050.1 RefSeq gene 675 2189 . + . ID=gene-CYJ01_RS11220;Name=CYJ01_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11220;old_locus_tag=CYJ01_11225 NZ_PJUR01000050.1 Protein Homology CDS 675 2189 . + 0 ID=cds-WP_101457566.1;Parent=gene-CYJ01_RS11220;Dbxref=GenBank:WP_101457566.1;Name=WP_101457566.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175164.1;locus_tag=CYJ01_RS11220;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_101457566.1;transl_table=11 NZ_PJUR01000050.1 RefSeq gene 2179 3465 . + . ID=gene-CYJ01_RS11225;Name=CYJ01_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11225;old_locus_tag=CYJ01_11230 NZ_PJUR01000050.1 Protein Homology CDS 2179 3465 . + 0 ID=cds-WP_101457567.1;Parent=gene-CYJ01_RS11225;Dbxref=GenBank:WP_101457567.1;Name=WP_101457567.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504701.1;locus_tag=CYJ01_RS11225;product=restriction endonuclease subunit S;protein_id=WP_101457567.1;transl_table=11 NZ_PJUR01000050.1 RefSeq gene 3449 6571 . + . ID=gene-CYJ01_RS11230;Name=CYJ01_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11230;old_locus_tag=CYJ01_11235 NZ_PJUR01000050.1 Protein Homology CDS 3449 6571 . + 0 ID=cds-WP_101457568.1;Parent=gene-CYJ01_RS11230;Dbxref=GenBank:WP_101457568.1;Name=WP_101457568.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=CYJ01_RS11230;product=type I restriction endonuclease subunit R;protein_id=WP_101457568.1;transl_table=11 NZ_PJUR01000050.1 RefSeq gene 6875 7948 . + . ID=gene-CYJ01_RS11235;Name=CYJ01_RS11235;end_range=7948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11235;old_locus_tag=CYJ01_11240;partial=true NZ_PJUR01000050.1 Protein Homology CDS 6875 7948 . + 0 ID=cds-WP_101457569.1;Parent=gene-CYJ01_RS11235;Dbxref=GenBank:WP_101457569.1;Name=WP_101457569.1;Ontology_term=GO:0004803;end_range=7948,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1;locus_tag=CYJ01_RS11235;partial=true;product=IS110 family RNA-guided transposase;protein_id=WP_101457569.1;transl_table=11 ##sequence-region NZ_PJUR01000051.1 1 5901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000051.1 RefSeq region 1 5901 . + . ID=NZ_PJUR01000051.1:1..5901;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000051.1 RefSeq gene 1 335 . - . ID=gene-CYJ01_RS11240;Name=CYJ01_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11240;old_locus_tag=CYJ01_11245;partial=true;start_range=.,1 NZ_PJUR01000051.1 Protein Homology CDS 1 335 . - 0 ID=cds-WP_133121618.1;Parent=gene-CYJ01_RS11240;Dbxref=GenBank:WP_133121618.1;Name=WP_133121618.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613022.1;locus_tag=CYJ01_RS11240;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_133121618.1;start_range=.,1;transl_table=11 NZ_PJUR01000051.1 RefSeq gene 328 1338 . - . ID=gene-CYJ01_RS11245;Name=CYJ01_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11245;old_locus_tag=CYJ01_11250 NZ_PJUR01000051.1 Protein Homology CDS 328 1338 . - 0 ID=cds-WP_014613021.1;Parent=gene-CYJ01_RS11245;Dbxref=GenBank:WP_014613021.1;Name=WP_014613021.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613021.1;locus_tag=CYJ01_RS11245;product=ABC transporter ATP-binding protein;protein_id=WP_014613021.1;transl_table=11 NZ_PJUR01000051.1 RefSeq gene 1444 3165 . - . ID=gene-CYJ01_RS11250;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ01_RS11250;old_locus_tag=CYJ01_11255 NZ_PJUR01000051.1 Protein Homology CDS 1444 3165 . - 0 ID=cds-WP_101457570.1;Parent=gene-CYJ01_RS11250;Dbxref=GenBank:WP_101457570.1;Name=WP_101457570.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613020.1;locus_tag=CYJ01_RS11250;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_101457570.1;transl_table=11 NZ_PJUR01000051.1 RefSeq gene 3397 4290 . - . ID=gene-CYJ01_RS11255;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ01_RS11255;old_locus_tag=CYJ01_11260 NZ_PJUR01000051.1 Protein Homology CDS 3397 4290 . - 0 ID=cds-WP_014613019.1;Parent=gene-CYJ01_RS11255;Dbxref=GenBank:WP_014613019.1;Name=WP_014613019.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613019.1;locus_tag=CYJ01_RS11255;product=oligopeptide ABC transporter permease;protein_id=WP_014613019.1;transl_table=11 NZ_PJUR01000051.1 RefSeq gene 4302 5264 . - . ID=gene-CYJ01_RS11260;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ01_RS11260;old_locus_tag=CYJ01_11265 NZ_PJUR01000051.1 Protein Homology CDS 4302 5264 . - 0 ID=cds-WP_014613018.1;Parent=gene-CYJ01_RS11260;Dbxref=GenBank:WP_014613018.1;Name=WP_014613018.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ01_RS11260;product=oligopeptide ABC transporter permease;protein_id=WP_014613018.1;transl_table=11 NZ_PJUR01000051.1 RefSeq gene 5261 5901 . - . ID=gene-CYJ01_RS11265;Name=CYJ01_RS11265;end_range=5901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11265;old_locus_tag=CYJ01_11270;partial=true NZ_PJUR01000051.1 Protein Homology CDS 5261 5901 . - 2 ID=cds-WP_133121619.1;Parent=gene-CYJ01_RS11265;Dbxref=GenBank:WP_133121619.1;Name=WP_133121619.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;end_range=5901,.;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613017.1;locus_tag=CYJ01_RS11265;partial=true;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_133121619.1;transl_table=11 ##sequence-region NZ_PJUR01000052.1 1 9000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000052.1 RefSeq region 1 9000 . + . ID=NZ_PJUR01000052.1:1..9000;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000052.1 RefSeq gene 1 1115 . + . ID=gene-CYJ01_RS11270;Name=CYJ01_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11270;old_locus_tag=CYJ01_11275;partial=true;start_range=.,1 NZ_PJUR01000052.1 Protein Homology CDS 1 1115 . + 2 ID=cds-WP_133121620.1;Parent=gene-CYJ01_RS11270;Dbxref=GenBank:WP_133121620.1;Name=WP_133121620.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=CYJ01_RS11270;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_133121620.1;start_range=.,1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 1128 2996 . + . ID=gene-CYJ01_RS11275;Name=CYJ01_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11275;old_locus_tag=CYJ01_11280 NZ_PJUR01000052.1 Protein Homology CDS 1128 2996 . + 0 ID=cds-WP_230314568.1;Parent=gene-CYJ01_RS11275;Dbxref=GenBank:WP_230314568.1;Name=WP_230314568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=CYJ01_RS11275;product=hypothetical protein;protein_id=WP_230314568.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 2993 3802 . + . ID=gene-CYJ01_RS11280;Name=CYJ01_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11280;old_locus_tag=CYJ01_11285 NZ_PJUR01000052.1 Protein Homology CDS 2993 3802 . + 0 ID=cds-WP_014614302.1;Parent=gene-CYJ01_RS11280;Dbxref=GenBank:WP_014614302.1;Name=WP_014614302.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=CYJ01_RS11280;product=ABC transporter permease;protein_id=WP_014614302.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 3814 5004 . + . ID=gene-CYJ01_RS11285;Name=CYJ01_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11285;old_locus_tag=CYJ01_11290 NZ_PJUR01000052.1 Protein Homology CDS 3814 5004 . + 0 ID=cds-WP_101431322.1;Parent=gene-CYJ01_RS11285;Dbxref=GenBank:WP_101431322.1;Name=WP_101431322.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=CYJ01_RS11285;product=glycosyltransferase family 4 protein;protein_id=WP_101431322.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 5010 5930 . + . ID=gene-CYJ01_RS11290;Name=CYJ01_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11290;old_locus_tag=CYJ01_11295 NZ_PJUR01000052.1 Protein Homology CDS 5010 5930 . + 0 ID=cds-WP_014614300.1;Parent=gene-CYJ01_RS11290;Dbxref=GenBank:WP_014614300.1;Name=WP_014614300.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614300.1;locus_tag=CYJ01_RS11290;product=ABC transporter ATP-binding protein;protein_id=WP_014614300.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 5950 6765 . + . ID=gene-CYJ01_RS11295;Name=CYJ01_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11295;old_locus_tag=CYJ01_11300 NZ_PJUR01000052.1 Protein Homology CDS 5950 6765 . + 0 ID=cds-WP_101431321.1;Parent=gene-CYJ01_RS11295;Dbxref=GenBank:WP_101431321.1;Name=WP_101431321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=CYJ01_RS11295;product=glycosyl transferase;protein_id=WP_101431321.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 6813 8144 . + . ID=gene-CYJ01_RS11300;Name=CYJ01_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11300;old_locus_tag=CYJ01_11305 NZ_PJUR01000052.1 Protein Homology CDS 6813 8144 . + 0 ID=cds-WP_101431320.1;Parent=gene-CYJ01_RS11300;Dbxref=GenBank:WP_101431320.1;Name=WP_101431320.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=CYJ01_RS11300;product=glycosyltransferase;protein_id=WP_101431320.1;transl_table=11 NZ_PJUR01000052.1 RefSeq gene 8254 8889 . + . ID=gene-CYJ01_RS11305;Name=CYJ01_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11305;old_locus_tag=CYJ01_11310 NZ_PJUR01000052.1 Protein Homology CDS 8254 8889 . + 0 ID=cds-WP_014614297.1;Parent=gene-CYJ01_RS11305;Dbxref=GenBank:WP_014614297.1;Name=WP_014614297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614297.1;locus_tag=CYJ01_RS11305;product=PepSY domain-containing protein;protein_id=WP_014614297.1;transl_table=11 ##sequence-region NZ_PJUR01000053.1 1 8165 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000053.1 RefSeq region 1 8165 . + . ID=NZ_PJUR01000053.1:1..8165;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000053.1 RefSeq pseudogene 1 380 . - . ID=gene-CYJ01_RS11310;Name=CYJ01_RS11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11310;old_locus_tag=CYJ01_11315;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000053.1 Protein Homology CDS 1 380 . - 0 ID=cds-CYJ01_RS11310;Parent=gene-CYJ01_RS11310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478208.1;locus_tag=CYJ01_RS11310;partial=true;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUR01000053.1 RefSeq gene 377 1255 . - . ID=gene-CYJ01_RS11315;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CYJ01_RS11315;old_locus_tag=CYJ01_11320 NZ_PJUR01000053.1 Protein Homology CDS 377 1255 . - 0 ID=cds-WP_014613953.1;Parent=gene-CYJ01_RS11315;Dbxref=GenBank:WP_014613953.1;Name=WP_014613953.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165352.1;locus_tag=CYJ01_RS11315;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_014613953.1;transl_table=11 NZ_PJUR01000053.1 RefSeq gene 1259 2245 . - . ID=gene-CYJ01_RS11320;Name=CYJ01_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11320;old_locus_tag=CYJ01_11325 NZ_PJUR01000053.1 Protein Homology CDS 1259 2245 . - 0 ID=cds-WP_014613954.1;Parent=gene-CYJ01_RS11320;Dbxref=GenBank:WP_014613954.1;Name=WP_014613954.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165353.1;locus_tag=CYJ01_RS11320;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_014613954.1;transl_table=11 NZ_PJUR01000053.1 cmsearch riboswitch 2450 2629 . - . ID=id-NZ_PJUR01000053.1:2450..2629;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000053.1 RefSeq gene 2886 4496 . - . ID=gene-CYJ01_RS11325;Name=CYJ01_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11325;old_locus_tag=CYJ01_11330 NZ_PJUR01000053.1 Protein Homology CDS 2886 4496 . - 0 ID=cds-WP_014613955.1;Parent=gene-CYJ01_RS11325;Dbxref=GenBank:WP_014613955.1;Name=WP_014613955.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=CYJ01_RS11325;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_014613955.1;transl_table=11 NZ_PJUR01000053.1 RefSeq gene 4697 5608 . + . ID=gene-CYJ01_RS11330;Name=CYJ01_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11330;old_locus_tag=CYJ01_11335 NZ_PJUR01000053.1 Protein Homology CDS 4697 5608 . + 0 ID=cds-WP_014613956.1;Parent=gene-CYJ01_RS11330;Dbxref=GenBank:WP_014613956.1;Name=WP_014613956.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613956.1;locus_tag=CYJ01_RS11330;product=CvfB family protein;protein_id=WP_014613956.1;transl_table=11 NZ_PJUR01000053.1 RefSeq gene 5875 8165 . + . ID=gene-CYJ01_RS11335;Name=CYJ01_RS11335;end_range=8165,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11335;old_locus_tag=CYJ01_11340;partial=true NZ_PJUR01000053.1 Protein Homology CDS 5875 8165 . + 0 ID=cds-WP_101457571.1;Parent=gene-CYJ01_RS11335;Dbxref=GenBank:WP_101457571.1;Name=WP_101457571.1;end_range=8165,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=CYJ01_RS11335;partial=true;product=Ig-like domain-containing protein;protein_id=WP_101457571.1;transl_table=11 ##sequence-region NZ_PJUR01000054.1 1 7058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000054.1 RefSeq region 1 7058 . + . ID=NZ_PJUR01000054.1:1..7058;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000054.1 RefSeq pseudogene 1 430 . - . ID=gene-CYJ01_RS11340;Name=CYJ01_RS11340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11340;old_locus_tag=CYJ01_11345;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000054.1 Protein Homology CDS 1 430 . - 0 ID=cds-CYJ01_RS11340;Parent=gene-CYJ01_RS11340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215400.1;locus_tag=CYJ01_RS11340;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 888 1478 . + . ID=gene-CYJ01_RS11345;Name=CYJ01_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11345;old_locus_tag=CYJ01_11350 NZ_PJUR01000054.1 Protein Homology CDS 888 1478 . + 0 ID=cds-WP_274539893.1;Parent=gene-CYJ01_RS11345;Dbxref=GenBank:WP_274539893.1;Name=WP_274539893.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF014875.8;locus_tag=CYJ01_RS11345;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_274539893.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 1533 2312 . + . ID=gene-CYJ01_RS11350;Name=CYJ01_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11350;old_locus_tag=CYJ01_11355 NZ_PJUR01000054.1 Protein Homology CDS 1533 2312 . + 0 ID=cds-WP_130882917.1;Parent=gene-CYJ01_RS11350;Dbxref=GenBank:WP_130882917.1;Name=WP_130882917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746437.1;locus_tag=CYJ01_RS11350;product=exotoxin;protein_id=WP_130882917.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 2731 3288 . + . ID=gene-CYJ01_RS11355;Name=CYJ01_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11355;old_locus_tag=CYJ01_11360 NZ_PJUR01000054.1 Protein Homology CDS 2731 3288 . + 0 ID=cds-WP_101457573.1;Parent=gene-CYJ01_RS11355;Dbxref=GenBank:WP_101457573.1;Name=WP_101457573.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612971.1;locus_tag=CYJ01_RS11355;product=M23 family metallopeptidase;protein_id=WP_101457573.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 3598 4317 . - . ID=gene-CYJ01_RS11360;Name=CYJ01_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11360;old_locus_tag=CYJ01_11365 NZ_PJUR01000054.1 Protein Homology CDS 3598 4317 . - 0 ID=cds-WP_014612970.1;Parent=gene-CYJ01_RS11360;Dbxref=GenBank:WP_014612970.1;Name=WP_014612970.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167245.1;locus_tag=CYJ01_RS11360;product=GTP pyrophosphokinase;protein_id=WP_014612970.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 4652 5281 . - . ID=gene-CYJ01_RS11365;Name=CYJ01_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11365;old_locus_tag=CYJ01_11370 NZ_PJUR01000054.1 Protein Homology CDS 4652 5281 . - 0 ID=cds-WP_014612969.1;Parent=gene-CYJ01_RS11365;Dbxref=GenBank:WP_014612969.1;Name=WP_014612969.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729635.1;locus_tag=CYJ01_RS11365;product=nitroreductase family protein;protein_id=WP_014612969.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 5423 5872 . + . ID=gene-CYJ01_RS11370;Name=CYJ01_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11370;old_locus_tag=CYJ01_11375 NZ_PJUR01000054.1 Protein Homology CDS 5423 5872 . + 0 ID=cds-WP_014612968.1;Parent=gene-CYJ01_RS11370;Dbxref=GenBank:WP_014612968.1;Name=WP_014612968.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164946.1;locus_tag=CYJ01_RS11370;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014612968.1;transl_table=11 NZ_PJUR01000054.1 RefSeq gene 6092 6916 . - . ID=gene-CYJ01_RS11375;Name=CYJ01_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11375;old_locus_tag=CYJ01_11380 NZ_PJUR01000054.1 Protein Homology CDS 6092 6916 . - 0 ID=cds-WP_101457575.1;Parent=gene-CYJ01_RS11375;Dbxref=GenBank:WP_101457575.1;Name=WP_101457575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612967.1;locus_tag=CYJ01_RS11375;product=hypothetical protein;protein_id=WP_101457575.1;transl_table=11 ##sequence-region NZ_PJUR01000055.1 1 5534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000055.1 RefSeq region 1 5534 . + . ID=NZ_PJUR01000055.1:1..5534;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000055.1 RefSeq gene 542 2350 . - . ID=gene-CYJ01_RS11380;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ01_RS11380;old_locus_tag=CYJ01_11385 NZ_PJUR01000055.1 Protein Homology CDS 542 2350 . - 0 ID=cds-WP_015728886.1;Parent=gene-CYJ01_RS11380;Dbxref=GenBank:WP_015728886.1;Name=WP_015728886.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=CYJ01_RS11380;product=oligoendopeptidase F;protein_id=WP_015728886.1;transl_table=11 NZ_PJUR01000055.1 RefSeq gene 2424 3389 . - . ID=gene-CYJ01_RS11385;Name=CYJ01_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11385;old_locus_tag=CYJ01_11390 NZ_PJUR01000055.1 Protein Homology CDS 2424 3389 . - 0 ID=cds-WP_101457576.1;Parent=gene-CYJ01_RS11385;Dbxref=GenBank:WP_101457576.1;Name=WP_101457576.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728885.1;locus_tag=CYJ01_RS11385;product=competence protein CoiA;protein_id=WP_101457576.1;transl_table=11 NZ_PJUR01000055.1 RefSeq gene 3663 4322 . - . ID=gene-CYJ01_RS11390;Name=spsR;gbkey=Gene;gene=spsR;gene_biotype=protein_coding;locus_tag=CYJ01_RS11390;old_locus_tag=CYJ01_11395 NZ_PJUR01000055.1 Protein Homology CDS 3663 4322 . - 0 ID=cds-WP_101457577.1;Parent=gene-CYJ01_RS11390;Dbxref=GenBank:WP_101457577.1;Name=WP_101457577.1;gbkey=CDS;gene=spsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614371.1;locus_tag=CYJ01_RS11390;product=LPXTG-anchored surface protein SpsR;protein_id=WP_101457577.1;transl_table=11 NZ_PJUR01000055.1 RefSeq gene 4341 5477 . - . ID=gene-CYJ01_RS11395;Name=CYJ01_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11395;old_locus_tag=CYJ01_11400 NZ_PJUR01000055.1 Protein Homology CDS 4341 5477 . - 0 ID=cds-WP_241536264.1;Parent=gene-CYJ01_RS11395;Dbxref=GenBank:WP_241536264.1;Name=WP_241536264.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167446.1;locus_tag=CYJ01_RS11395;product=trypsin-like serine peptidase;protein_id=WP_241536264.1;transl_table=11 ##sequence-region NZ_PJUR01000056.1 1 5078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000056.1 RefSeq region 1 5078 . + . ID=NZ_PJUR01000056.1:1..5078;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000056.1 RefSeq gene 78 401 . - . ID=gene-CYJ01_RS11400;Name=CYJ01_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11400;old_locus_tag=CYJ01_11405 NZ_PJUR01000056.1 Protein Homology CDS 78 401 . - 0 ID=cds-WP_201800474.1;Parent=gene-CYJ01_RS11400;Dbxref=GenBank:WP_201800474.1;Name=WP_201800474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613525.1;locus_tag=CYJ01_RS11400;product=hypothetical protein;protein_id=WP_201800474.1;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 468 638 . - . ID=gene-CYJ01_RS11405;Name=CYJ01_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11405;old_locus_tag=CYJ01_11410 NZ_PJUR01000056.1 GeneMarkS-2+ CDS 468 638 . - 0 ID=cds-WP_179300498.1;Parent=gene-CYJ01_RS11405;Dbxref=GenBank:WP_179300498.1;Name=WP_179300498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11405;product=hypothetical protein;protein_id=WP_179300498.1;transl_table=11 NZ_PJUR01000056.1 RefSeq pseudogene 758 1681 . - . ID=gene-CYJ01_RS11410;Name=CYJ01_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11410;old_locus_tag=CYJ01_11415;pseudo=true NZ_PJUR01000056.1 Protein Homology CDS 758 1681 . - 0 ID=cds-CYJ01_RS11410;Parent=gene-CYJ01_RS11410;Note=internal stop;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458419.1;locus_tag=CYJ01_RS11410;product=peptidoglycan recognition protein family protein;pseudo=true;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 2221 2412 . - . ID=gene-CYJ01_RS11420;Name=CYJ01_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11420;old_locus_tag=CYJ01_11425 NZ_PJUR01000056.1 Protein Homology CDS 2221 2412 . - 0 ID=cds-WP_063279149.1;Parent=gene-CYJ01_RS11420;Dbxref=GenBank:WP_063279149.1;Name=WP_063279149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613521.1;locus_tag=CYJ01_RS11420;product=hypothetical protein;protein_id=WP_063279149.1;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 2452 2850 . - . ID=gene-CYJ01_RS11425;Name=CYJ01_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11425;old_locus_tag=CYJ01_11430 NZ_PJUR01000056.1 GeneMarkS-2+ CDS 2452 2850 . - 0 ID=cds-WP_070407783.1;Parent=gene-CYJ01_RS11425;Dbxref=GenBank:WP_070407783.1;Name=WP_070407783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11425;product=hypothetical protein;protein_id=WP_070407783.1;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 2862 3392 . - . ID=gene-CYJ01_RS11430;Name=CYJ01_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11430;old_locus_tag=CYJ01_11435 NZ_PJUR01000056.1 Protein Homology CDS 2862 3392 . - 0 ID=cds-WP_101431652.1;Parent=gene-CYJ01_RS11430;Dbxref=GenBank:WP_101431652.1;Name=WP_101431652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613519.1;locus_tag=CYJ01_RS11430;product=phage upper tail fiber protein;protein_id=WP_101431652.1;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 3447 3794 . - . ID=gene-CYJ01_RS11435;Name=CYJ01_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11435;old_locus_tag=CYJ01_11440 NZ_PJUR01000056.1 Protein Homology CDS 3447 3794 . - 0 ID=cds-WP_070407782.1;Parent=gene-CYJ01_RS11435;Dbxref=GenBank:WP_070407782.1;Name=WP_070407782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220229.1;locus_tag=CYJ01_RS11435;product=hypothetical protein;protein_id=WP_070407782.1;transl_table=11 NZ_PJUR01000056.1 RefSeq gene 4100 4173 . - . ID=gene-CYJ01_RS11440;Name=CYJ01_RS11440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11440;old_locus_tag=CYJ01_11445 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4100 4173 . - . ID=rna-CYJ01_RS11440;Parent=gene-CYJ01_RS11440;anticodon=(pos:complement(4139..4141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11440;product=tRNA-Gly NZ_PJUR01000056.1 tRNAscan-SE exon 4100 4173 . - . ID=exon-CYJ01_RS11440-1;Parent=rna-CYJ01_RS11440;anticodon=(pos:complement(4139..4141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11440;product=tRNA-Gly NZ_PJUR01000056.1 RefSeq gene 4207 4281 . - . ID=gene-CYJ01_RS11445;Name=CYJ01_RS11445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11445;old_locus_tag=CYJ01_11450 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4207 4281 . - . ID=rna-CYJ01_RS11445;Parent=gene-CYJ01_RS11445;anticodon=(pos:complement(4246..4248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11445;product=tRNA-Gly NZ_PJUR01000056.1 tRNAscan-SE exon 4207 4281 . - . ID=exon-CYJ01_RS11445-1;Parent=rna-CYJ01_RS11445;anticodon=(pos:complement(4246..4248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11445;product=tRNA-Gly NZ_PJUR01000056.1 RefSeq gene 4296 4370 . - . ID=gene-CYJ01_RS11450;Name=CYJ01_RS11450;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11450;old_locus_tag=CYJ01_11455 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4296 4370 . - . ID=rna-CYJ01_RS11450;Parent=gene-CYJ01_RS11450;anticodon=(pos:complement(4336..4338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11450;product=tRNA-Cys NZ_PJUR01000056.1 tRNAscan-SE exon 4296 4370 . - . ID=exon-CYJ01_RS11450-1;Parent=rna-CYJ01_RS11450;anticodon=(pos:complement(4336..4338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11450;product=tRNA-Cys NZ_PJUR01000056.1 RefSeq gene 4379 4450 . - . ID=gene-CYJ01_RS11455;Name=CYJ01_RS11455;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11455;old_locus_tag=CYJ01_11460 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4379 4450 . - . ID=rna-CYJ01_RS11455;Parent=gene-CYJ01_RS11455;anticodon=(pos:complement(4416..4418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11455;product=tRNA-Gln NZ_PJUR01000056.1 tRNAscan-SE exon 4379 4450 . - . ID=exon-CYJ01_RS11455-1;Parent=rna-CYJ01_RS11455;anticodon=(pos:complement(4416..4418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11455;product=tRNA-Gln NZ_PJUR01000056.1 RefSeq gene 4455 4538 . - . ID=gene-CYJ01_RS11460;Name=CYJ01_RS11460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11460;old_locus_tag=CYJ01_11465 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4455 4538 . - . ID=rna-CYJ01_RS11460;Parent=gene-CYJ01_RS11460;anticodon=(pos:complement(4502..4504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11460;product=tRNA-Tyr NZ_PJUR01000056.1 tRNAscan-SE exon 4455 4538 . - . ID=exon-CYJ01_RS11460-1;Parent=rna-CYJ01_RS11460;anticodon=(pos:complement(4502..4504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11460;product=tRNA-Tyr NZ_PJUR01000056.1 RefSeq gene 4545 4620 . - . ID=gene-CYJ01_RS11465;Name=CYJ01_RS11465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11465;old_locus_tag=CYJ01_11470 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4545 4620 . - . ID=rna-CYJ01_RS11465;Parent=gene-CYJ01_RS11465;anticodon=(pos:complement(4585..4587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11465;product=tRNA-Thr NZ_PJUR01000056.1 tRNAscan-SE exon 4545 4620 . - . ID=exon-CYJ01_RS11465-1;Parent=rna-CYJ01_RS11465;anticodon=(pos:complement(4585..4587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11465;product=tRNA-Thr NZ_PJUR01000056.1 RefSeq gene 4623 4698 . - . ID=gene-CYJ01_RS11470;Name=CYJ01_RS11470;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11470;old_locus_tag=CYJ01_11475 NZ_PJUR01000056.1 tRNAscan-SE tRNA 4623 4698 . - . ID=rna-CYJ01_RS11470;Parent=gene-CYJ01_RS11470;anticodon=(pos:complement(4663..4665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11470;product=tRNA-Val NZ_PJUR01000056.1 tRNAscan-SE exon 4623 4698 . - . ID=exon-CYJ01_RS11470-1;Parent=rna-CYJ01_RS11470;anticodon=(pos:complement(4663..4665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11470;product=tRNA-Val NZ_PJUR01000056.1 RefSeq gene 4708 4822 . - . ID=gene-CYJ01_RS11475;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ01_RS11475;old_locus_tag=CYJ01_11480 NZ_PJUR01000056.1 cmsearch rRNA 4708 4822 . - . ID=rna-CYJ01_RS11475;Parent=gene-CYJ01_RS11475;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11475;product=5S ribosomal RNA NZ_PJUR01000056.1 cmsearch exon 4708 4822 . - . ID=exon-CYJ01_RS11475-1;Parent=rna-CYJ01_RS11475;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11475;product=5S ribosomal RNA NZ_PJUR01000056.1 RefSeq gene 4904 5078 . - . ID=gene-CYJ01_RS11480;Name=CYJ01_RS11480;end_range=5078,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS11480;old_locus_tag=CYJ01_11485;partial=true NZ_PJUR01000056.1 cmsearch rRNA 4904 5078 . - . ID=rna-CYJ01_RS11480;Parent=gene-CYJ01_RS11480;Dbxref=RFAM:RF02541;end_range=5078,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11480;partial=true;product=23S ribosomal RNA NZ_PJUR01000056.1 cmsearch exon 4904 5078 . - . ID=exon-CYJ01_RS11480-1;Parent=rna-CYJ01_RS11480;Dbxref=RFAM:RF02541;end_range=5078,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11480;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PJUR01000057.1 1 7095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000057.1 RefSeq region 1 7095 . + . ID=NZ_PJUR01000057.1:1..7095;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000057.1 RefSeq pseudogene 1 228 . + . ID=gene-CYJ01_RS12190;Name=CYJ01_RS12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12190;old_locus_tag=CYJ01_11490;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000057.1 GeneMarkS-2+ CDS 1 228 . + 0 ID=cds-CYJ01_RS12190;Parent=gene-CYJ01_RS12190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 253 2292 . + . ID=gene-CYJ01_RS11490;Name=CYJ01_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11490;old_locus_tag=CYJ01_11495 NZ_PJUR01000057.1 Protein Homology CDS 253 2292 . + 0 ID=cds-WP_233517354.1;Parent=gene-CYJ01_RS11490;Dbxref=GenBank:WP_233517354.1;Name=WP_233517354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=CYJ01_RS11490;product=HelD family protein;protein_id=WP_233517354.1;transl_table=11 NZ_PJUR01000057.1 RefSeq pseudogene 2716 3033 . - . ID=gene-CYJ01_RS11495;Name=CYJ01_RS11495;end_range=3033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11495;old_locus_tag=CYJ01_11500;partial=true;pseudo=true NZ_PJUR01000057.1 Protein Homology CDS 2716 3033 . - 0 ID=cds-CYJ01_RS11495;Parent=gene-CYJ01_RS11495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=3033,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ01_RS11495;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 3465 3833 . + . ID=gene-CYJ01_RS11505;Name=CYJ01_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11505;old_locus_tag=CYJ01_11510 NZ_PJUR01000057.1 Protein Homology CDS 3465 3833 . + 0 ID=cds-WP_014614295.1;Parent=gene-CYJ01_RS11505;Dbxref=GenBank:WP_014614295.1;Name=WP_014614295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614295.1;locus_tag=CYJ01_RS11505;product=glycine-rich domain-containing protein;protein_id=WP_014614295.1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 3800 4624 . + . ID=gene-CYJ01_RS11510;Name=CYJ01_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11510;old_locus_tag=CYJ01_11515 NZ_PJUR01000057.1 Protein Homology CDS 3800 4624 . + 0 ID=cds-WP_101431319.1;Parent=gene-CYJ01_RS11510;Dbxref=GenBank:WP_101431319.1;Name=WP_101431319.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.7;locus_tag=CYJ01_RS11510;product=serine/threonine-protein kinase;protein_id=WP_101431319.1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 4608 5102 . - . ID=gene-CYJ01_RS11515;Name=CYJ01_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11515;old_locus_tag=CYJ01_11520 NZ_PJUR01000057.1 Protein Homology CDS 4608 5102 . - 0 ID=cds-WP_014614293.1;Parent=gene-CYJ01_RS11515;Dbxref=GenBank:WP_014614293.1;Name=WP_014614293.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.7;locus_tag=CYJ01_RS11515;product=GNAT family N-acetyltransferase;protein_id=WP_014614293.1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 5136 5612 . + . ID=gene-CYJ01_RS11520;Name=CYJ01_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11520;old_locus_tag=CYJ01_11525 NZ_PJUR01000057.1 Protein Homology CDS 5136 5612 . + 0 ID=cds-WP_101431318.1;Parent=gene-CYJ01_RS11520;Dbxref=GenBank:WP_101431318.1;Name=WP_101431318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=CYJ01_RS11520;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_101431318.1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 5587 6123 . + . ID=gene-CYJ01_RS11525;Name=CYJ01_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11525;old_locus_tag=CYJ01_11530 NZ_PJUR01000057.1 Protein Homology CDS 5587 6123 . + 0 ID=cds-WP_233506577.1;Parent=gene-CYJ01_RS11525;Dbxref=GenBank:WP_233506577.1;Name=WP_233506577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219585.1;locus_tag=CYJ01_RS11525;product=hypothetical protein;protein_id=WP_233506577.1;transl_table=11 NZ_PJUR01000057.1 RefSeq gene 6104 7095 . + . ID=gene-CYJ01_RS11530;Name=CYJ01_RS11530;end_range=7095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11530;old_locus_tag=CYJ01_11535;partial=true NZ_PJUR01000057.1 Protein Homology CDS 6104 7095 . + 0 ID=cds-WP_133121622.1;Parent=gene-CYJ01_RS11530;Dbxref=GenBank:WP_133121622.1;Name=WP_133121622.1;Ontology_term=GO:0055085,GO:0022857;end_range=7095,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ01_RS11530;partial=true;product=MFS transporter;protein_id=WP_133121622.1;transl_table=11 ##sequence-region NZ_PJUR01000058.1 1 4398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000058.1 RefSeq region 1 4398 . + . ID=NZ_PJUR01000058.1:1..4398;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000058.1 RefSeq gene 102 1505 . - . ID=gene-CYJ01_RS11535;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CYJ01_RS11535;old_locus_tag=CYJ01_11540 NZ_PJUR01000058.1 Protein Homology CDS 102 1505 . - 0 ID=cds-WP_014613560.1;Parent=gene-CYJ01_RS11535;Dbxref=GenBank:WP_014613560.1;Name=WP_014613560.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164996.1;locus_tag=CYJ01_RS11535;product=protoporphyrinogen oxidase;protein_id=WP_014613560.1;transl_table=11 NZ_PJUR01000058.1 RefSeq gene 1511 2443 . - . ID=gene-CYJ01_RS11540;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CYJ01_RS11540;old_locus_tag=CYJ01_11545 NZ_PJUR01000058.1 Protein Homology CDS 1511 2443 . - 0 ID=cds-WP_014613559.1;Parent=gene-CYJ01_RS11540;Dbxref=GenBank:WP_014613559.1;Name=WP_014613559.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=CYJ01_RS11540;product=ferrochelatase;protein_id=WP_014613559.1;transl_table=11 NZ_PJUR01000058.1 RefSeq gene 2481 3515 . - . ID=gene-CYJ01_RS11545;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CYJ01_RS11545;old_locus_tag=CYJ01_11550 NZ_PJUR01000058.1 Protein Homology CDS 2481 3515 . - 0 ID=cds-WP_014613558.1;Parent=gene-CYJ01_RS11545;Dbxref=GenBank:WP_014613558.1;Name=WP_014613558.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500461.1;locus_tag=CYJ01_RS11545;product=uroporphyrinogen decarboxylase;protein_id=WP_014613558.1;transl_table=11 NZ_PJUR01000058.1 RefSeq gene 3827 4339 . + . ID=gene-CYJ01_RS11550;Name=CYJ01_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11550;old_locus_tag=CYJ01_11555 NZ_PJUR01000058.1 Protein Homology CDS 3827 4339 . + 0 ID=cds-WP_101457578.1;Parent=gene-CYJ01_RS11550;Dbxref=GenBank:WP_101457578.1;Name=WP_101457578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613557.1;locus_tag=CYJ01_RS11550;product=antibiotic biosynthesis monooxygenase;protein_id=WP_101457578.1;transl_table=11 ##sequence-region NZ_PJUR01000059.1 1 5536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000059.1 RefSeq region 1 5536 . + . ID=NZ_PJUR01000059.1:1..5536;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000059.1 RefSeq gene 1 209 . - . ID=gene-CYJ01_RS11555;Name=CYJ01_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11555;old_locus_tag=CYJ01_11560;partial=true;start_range=.,1 NZ_PJUR01000059.1 Protein Homology CDS 1 209 . - 0 ID=cds-WP_101457579.1;Parent=gene-CYJ01_RS11555;Dbxref=GenBank:WP_101457579.1;Name=WP_101457579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503462.1;locus_tag=CYJ01_RS11555;partial=true;product=magnetosome magnetite crystal formation protein family;protein_id=WP_101457579.1;start_range=.,1;transl_table=11 NZ_PJUR01000059.1 RefSeq gene 1067 1813 . + . ID=gene-CYJ01_RS11560;Name=CYJ01_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11560;old_locus_tag=CYJ01_11565 NZ_PJUR01000059.1 Protein Homology CDS 1067 1813 . + 0 ID=cds-WP_070407765.1;Parent=gene-CYJ01_RS11560;Dbxref=GenBank:WP_070407765.1;Name=WP_070407765.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614014.1;locus_tag=CYJ01_RS11560;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_070407765.1;transl_table=11 NZ_PJUR01000059.1 RefSeq gene 1844 3136 . + . ID=gene-CYJ01_RS11565;Name=CYJ01_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11565;old_locus_tag=CYJ01_11570 NZ_PJUR01000059.1 Protein Homology CDS 1844 3136 . + 0 ID=cds-WP_101431596.1;Parent=gene-CYJ01_RS11565;Dbxref=GenBank:WP_101431596.1;Name=WP_101431596.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614013.1;locus_tag=CYJ01_RS11565;product=MFS transporter;protein_id=WP_101431596.1;transl_table=11 NZ_PJUR01000059.1 RefSeq gene 3297 3539 . + . ID=gene-CYJ01_RS11570;Name=CYJ01_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11570;old_locus_tag=CYJ01_11575 NZ_PJUR01000059.1 Protein Homology CDS 3297 3539 . + 0 ID=cds-WP_096547830.1;Parent=gene-CYJ01_RS11570;Dbxref=GenBank:WP_096547830.1;Name=WP_096547830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729073.1;locus_tag=CYJ01_RS11570;product=hypothetical protein;protein_id=WP_096547830.1;transl_table=11 NZ_PJUR01000059.1 RefSeq gene 3618 4358 . + . ID=gene-CYJ01_RS11575;Name=CYJ01_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11575;old_locus_tag=CYJ01_11580 NZ_PJUR01000059.1 Protein Homology CDS 3618 4358 . + 0 ID=cds-WP_101457580.1;Parent=gene-CYJ01_RS11575;Dbxref=GenBank:WP_101457580.1;Name=WP_101457580.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729074.1;locus_tag=CYJ01_RS11575;product=HAD family hydrolase;protein_id=WP_101457580.1;transl_table=11 NZ_PJUR01000059.1 RefSeq gene 4650 5291 . - . ID=gene-CYJ01_RS11580;Name=CYJ01_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11580;old_locus_tag=CYJ01_11585 NZ_PJUR01000059.1 Protein Homology CDS 4650 5291 . - 0 ID=cds-WP_101457581.1;Parent=gene-CYJ01_RS11580;Dbxref=GenBank:WP_101457581.1;Name=WP_101457581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614009.1;locus_tag=CYJ01_RS11580;product=thermonuclease family protein;protein_id=WP_101457581.1;transl_table=11 ##sequence-region NZ_PJUR01000006.1 1 102564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000006.1 RefSeq region 1 102564 . + . ID=NZ_PJUR01000006.1:1..102564;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000006.1 RefSeq gene 147 1451 . + . ID=gene-CYJ01_RS03400;Name=CYJ01_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03400;old_locus_tag=CYJ01_03400 NZ_PJUR01000006.1 Protein Homology CDS 147 1451 . + 0 ID=cds-WP_101457250.1;Parent=gene-CYJ01_RS03400;Dbxref=GenBank:WP_101457250.1;Name=WP_101457250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=CYJ01_RS03400;product=YjiH family protein;protein_id=WP_101457250.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 1473 3137 . + . ID=gene-CYJ01_RS03405;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CYJ01_RS03405;old_locus_tag=CYJ01_03405 NZ_PJUR01000006.1 Protein Homology CDS 1473 3137 . + 0 ID=cds-WP_161193175.1;Parent=gene-CYJ01_RS03405;Dbxref=GenBank:WP_161193175.1;Name=WP_161193175.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613131.1;locus_tag=CYJ01_RS03405;product=urocanate hydratase;protein_id=WP_161193175.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 3134 4375 . + . ID=gene-CYJ01_RS03410;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CYJ01_RS03410;old_locus_tag=CYJ01_03410 NZ_PJUR01000006.1 Protein Homology CDS 3134 4375 . + 0 ID=cds-WP_014613132.1;Parent=gene-CYJ01_RS03410;Dbxref=GenBank:WP_014613132.1;Name=WP_014613132.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729560.1;locus_tag=CYJ01_RS03410;product=imidazolonepropionase;protein_id=WP_014613132.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 4910 6100 . + . ID=gene-CYJ01_RS03415;Name=CYJ01_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03415;old_locus_tag=CYJ01_03415 NZ_PJUR01000006.1 Protein Homology CDS 4910 6100 . + 0 ID=cds-WP_241900523.1;Parent=gene-CYJ01_RS03415;Dbxref=GenBank:WP_241900523.1;Name=WP_241900523.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167149.1;locus_tag=CYJ01_RS03415;product=SulP family inorganic anion transporter;protein_id=WP_241900523.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 6090 7226 . + . ID=gene-CYJ01_RS03420;Name=CYJ01_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03420;old_locus_tag=CYJ01_03420 NZ_PJUR01000006.1 Protein Homology CDS 6090 7226 . + 0 ID=cds-WP_014613134.1;Parent=gene-CYJ01_RS03420;Dbxref=GenBank:WP_014613134.1;Name=WP_014613134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613134.1;locus_tag=CYJ01_RS03420;product=M20 peptidase aminoacylase family protein;protein_id=WP_014613134.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 7389 8690 . + . ID=gene-CYJ01_RS03425;Name=CYJ01_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03425;old_locus_tag=CYJ01_03425 NZ_PJUR01000006.1 Protein Homology CDS 7389 8690 . + 0 ID=cds-WP_101457252.1;Parent=gene-CYJ01_RS03425;Dbxref=GenBank:WP_101457252.1;Name=WP_101457252.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613135.1;locus_tag=CYJ01_RS03425;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_101457252.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 8795 9304 . + . ID=gene-CYJ01_RS03430;Name=CYJ01_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03430;old_locus_tag=CYJ01_03430 NZ_PJUR01000006.1 Protein Homology CDS 8795 9304 . + 0 ID=cds-WP_198587994.1;Parent=gene-CYJ01_RS03430;Dbxref=GenBank:WP_198587994.1;Name=WP_198587994.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219778.1;locus_tag=CYJ01_RS03430;product=SRPBCC family protein;protein_id=WP_198587994.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 9420 9947 . - . ID=gene-CYJ01_RS03435;Name=CYJ01_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03435;old_locus_tag=CYJ01_03435 NZ_PJUR01000006.1 Protein Homology CDS 9420 9947 . - 0 ID=cds-WP_101457253.1;Parent=gene-CYJ01_RS03435;Dbxref=GenBank:WP_101457253.1;Name=WP_101457253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167153.1;locus_tag=CYJ01_RS03435;product=hypothetical protein;protein_id=WP_101457253.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 10137 11057 . + . ID=gene-CYJ01_RS03440;Name=CYJ01_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03440;old_locus_tag=CYJ01_03440 NZ_PJUR01000006.1 Protein Homology CDS 10137 11057 . + 0 ID=cds-WP_101457254.1;Parent=gene-CYJ01_RS03440;Dbxref=GenBank:WP_101457254.1;Name=WP_101457254.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169620.1;locus_tag=CYJ01_RS03440;product=bile acid:sodium symporter family protein;protein_id=WP_101457254.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 11236 11514 . + . ID=gene-CYJ01_RS03445;Name=CYJ01_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03445;old_locus_tag=CYJ01_03445 NZ_PJUR01000006.1 Protein Homology CDS 11236 11514 . + 0 ID=cds-WP_014613139.1;Parent=gene-CYJ01_RS03445;Dbxref=GenBank:WP_014613139.1;Name=WP_014613139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=CYJ01_RS03445;product=hypothetical protein;protein_id=WP_014613139.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 11594 12424 . + . ID=gene-CYJ01_RS03450;Name=CYJ01_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03450;old_locus_tag=CYJ01_03450 NZ_PJUR01000006.1 Protein Homology CDS 11594 12424 . + 0 ID=cds-WP_015729555.1;Parent=gene-CYJ01_RS03450;Dbxref=GenBank:WP_015729555.1;Name=WP_015729555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=CYJ01_RS03450;product=VOC family protein;protein_id=WP_015729555.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 12470 13114 . + . ID=gene-CYJ01_RS03455;Name=CYJ01_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03455;old_locus_tag=CYJ01_03455 NZ_PJUR01000006.1 Protein Homology CDS 12470 13114 . + 0 ID=cds-WP_014613141.1;Parent=gene-CYJ01_RS03455;Dbxref=GenBank:WP_014613141.1;Name=WP_014613141.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=CYJ01_RS03455;product=HAD family hydrolase;protein_id=WP_014613141.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 13111 13302 . + . ID=gene-CYJ01_RS03460;Name=CYJ01_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03460;old_locus_tag=CYJ01_03460 NZ_PJUR01000006.1 Protein Homology CDS 13111 13302 . + 0 ID=cds-WP_014613142.1;Parent=gene-CYJ01_RS03460;Dbxref=GenBank:WP_014613142.1;Name=WP_014613142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=CYJ01_RS03460;product=hypothetical protein;protein_id=WP_014613142.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 13517 13699 . - . ID=gene-CYJ01_RS03465;Name=CYJ01_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03465;old_locus_tag=CYJ01_03465 NZ_PJUR01000006.1 Protein Homology CDS 13517 13699 . - 0 ID=cds-WP_014613143.1;Parent=gene-CYJ01_RS03465;Dbxref=GenBank:WP_014613143.1;Name=WP_014613143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=CYJ01_RS03465;product=hypothetical protein;protein_id=WP_014613143.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 13706 14041 . - . ID=gene-CYJ01_RS03470;Name=CYJ01_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03470;old_locus_tag=CYJ01_03470 NZ_PJUR01000006.1 Protein Homology CDS 13706 14041 . - 0 ID=cds-WP_015729553.1;Parent=gene-CYJ01_RS03470;Dbxref=GenBank:WP_015729553.1;Name=WP_015729553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613144.1;locus_tag=CYJ01_RS03470;product=hypothetical protein;protein_id=WP_015729553.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 14129 14971 . - . ID=gene-CYJ01_RS03475;Name=CYJ01_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03475;old_locus_tag=CYJ01_03475 NZ_PJUR01000006.1 Protein Homology CDS 14129 14971 . - 0 ID=cds-WP_037542374.1;Parent=gene-CYJ01_RS03475;Dbxref=GenBank:WP_037542374.1;Name=WP_037542374.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=CYJ01_RS03475;product=formate/nitrite transporter family protein;protein_id=WP_037542374.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 15338 16726 . + . ID=gene-CYJ01_RS03480;Name=CYJ01_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03480;old_locus_tag=CYJ01_03480 NZ_PJUR01000006.1 Protein Homology CDS 15338 16726 . + 0 ID=cds-WP_014613146.1;Parent=gene-CYJ01_RS03480;Dbxref=GenBank:WP_014613146.1;Name=WP_014613146.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=CYJ01_RS03480;product=amino acid permease;protein_id=WP_014613146.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 16922 17275 . - . ID=gene-CYJ01_RS03485;Name=CYJ01_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03485;old_locus_tag=CYJ01_03485 NZ_PJUR01000006.1 Protein Homology CDS 16922 17275 . - 0 ID=cds-WP_100007018.1;Parent=gene-CYJ01_RS03485;Dbxref=GenBank:WP_100007018.1;Name=WP_100007018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613147.1;locus_tag=CYJ01_RS03485;product=hypothetical protein;protein_id=WP_100007018.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 17419 18150 . + . ID=gene-CYJ01_RS03490;Name=CYJ01_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03490;old_locus_tag=CYJ01_03490 NZ_PJUR01000006.1 Protein Homology CDS 17419 18150 . + 0 ID=cds-WP_014613148.1;Parent=gene-CYJ01_RS03490;Dbxref=GenBank:WP_014613148.1;Name=WP_014613148.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613148.1;locus_tag=CYJ01_RS03490;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_014613148.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 18204 18905 . - . ID=gene-CYJ01_RS03495;Name=CYJ01_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03495;old_locus_tag=CYJ01_03495 NZ_PJUR01000006.1 Protein Homology CDS 18204 18905 . - 0 ID=cds-WP_014613149.1;Parent=gene-CYJ01_RS03495;Dbxref=GenBank:WP_014613149.1;Name=WP_014613149.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=CYJ01_RS03495;product=helix-turn-helix transcriptional regulator;protein_id=WP_014613149.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 19358 20152 . + . ID=gene-CYJ01_RS03500;Name=CYJ01_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03500;old_locus_tag=CYJ01_03500 NZ_PJUR01000006.1 Protein Homology CDS 19358 20152 . + 0 ID=cds-WP_096533477.1;Parent=gene-CYJ01_RS03500;Dbxref=GenBank:WP_096533477.1;Name=WP_096533477.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613150.1;locus_tag=CYJ01_RS03500;product=inositol monophosphatase family protein;protein_id=WP_096533477.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 20280 21233 . + . ID=gene-CYJ01_RS03505;Name=CYJ01_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03505;old_locus_tag=CYJ01_03505 NZ_PJUR01000006.1 Protein Homology CDS 20280 21233 . + 0 ID=cds-WP_014613151.1;Parent=gene-CYJ01_RS03505;Dbxref=GenBank:WP_014613151.1;Name=WP_014613151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613151.1;locus_tag=CYJ01_RS03505;product=LCP family glycopolymer transferase;protein_id=WP_014613151.1;transl_table=11 NZ_PJUR01000006.1 RefSeq pseudogene 21463 22170 . + . ID=gene-CYJ01_RS03510;Name=CYJ01_RS03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS03510;old_locus_tag=CYJ01_03510;pseudo=true NZ_PJUR01000006.1 Protein Homology CDS 21463 22170 . + 0 ID=cds-CYJ01_RS03510;Parent=gene-CYJ01_RS03510;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729548.1;locus_tag=CYJ01_RS03510;product=DUF969 domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 22151 23077 . + . ID=gene-CYJ01_RS03515;Name=CYJ01_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03515;old_locus_tag=CYJ01_03515 NZ_PJUR01000006.1 Protein Homology CDS 22151 23077 . + 0 ID=cds-WP_037542383.1;Parent=gene-CYJ01_RS03515;Dbxref=GenBank:WP_037542383.1;Name=WP_037542383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167169.1;locus_tag=CYJ01_RS03515;product=DUF979 domain-containing protein;protein_id=WP_037542383.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 23102 23743 . + . ID=gene-CYJ01_RS03520;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CYJ01_RS03520;old_locus_tag=CYJ01_03520 NZ_PJUR01000006.1 Protein Homology CDS 23102 23743 . + 0 ID=cds-WP_101457255.1;Parent=gene-CYJ01_RS03520;Dbxref=GenBank:WP_101457255.1;Name=WP_101457255.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=CYJ01_RS03520;product=pyroglutamyl-peptidase I;protein_id=WP_101457255.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 23940 26876 . + . ID=gene-CYJ01_RS03525;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CYJ01_RS03525;old_locus_tag=CYJ01_03525 NZ_PJUR01000006.1 Protein Homology CDS 23940 26876 . + 0 ID=cds-WP_014613154.1;Parent=gene-CYJ01_RS03525;Dbxref=GenBank:WP_014613154.1;Name=WP_014613154.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=CYJ01_RS03525;product=formate dehydrogenase subunit alpha;protein_id=WP_014613154.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 26876 27343 . + . ID=gene-CYJ01_RS03530;Name=CYJ01_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03530;old_locus_tag=CYJ01_03530 NZ_PJUR01000006.1 Protein Homology CDS 26876 27343 . + 0 ID=cds-WP_015729545.1;Parent=gene-CYJ01_RS03530;Dbxref=GenBank:WP_015729545.1;Name=WP_015729545.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729545.1;locus_tag=CYJ01_RS03530;product=helical membrane plugin domain-containing protein;protein_id=WP_015729545.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 28099 28341 . + . ID=gene-CYJ01_RS03535;Name=CYJ01_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03535;old_locus_tag=CYJ01_03535 NZ_PJUR01000006.1 Protein Homology CDS 28099 28341 . + 0 ID=cds-WP_014613156.1;Parent=gene-CYJ01_RS03535;Dbxref=GenBank:WP_014613156.1;Name=WP_014613156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=CYJ01_RS03535;product=hypothetical protein;protein_id=WP_014613156.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 28369 29148 . + . ID=gene-CYJ01_RS03540;Name=CYJ01_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03540;old_locus_tag=CYJ01_03540 NZ_PJUR01000006.1 Protein Homology CDS 28369 29148 . + 0 ID=cds-WP_014613157.1;Parent=gene-CYJ01_RS03540;Dbxref=GenBank:WP_014613157.1;Name=WP_014613157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729543.1;locus_tag=CYJ01_RS03540;product=N-acetylglucosaminidase;protein_id=WP_014613157.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 29168 30295 . + . ID=gene-CYJ01_RS03545;Name=CYJ01_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03545;old_locus_tag=CYJ01_03545 NZ_PJUR01000006.1 Protein Homology CDS 29168 30295 . + 0 ID=cds-WP_014613158.1;Parent=gene-CYJ01_RS03545;Dbxref=GenBank:WP_014613158.1;Name=WP_014613158.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=CYJ01_RS03545;product=FAD-dependent monooxygenase;protein_id=WP_014613158.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 30496 31458 . - . ID=gene-CYJ01_RS03550;Name=CYJ01_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03550;old_locus_tag=CYJ01_03550 NZ_PJUR01000006.1 Protein Homology CDS 30496 31458 . - 0 ID=cds-WP_014613159.1;Parent=gene-CYJ01_RS03550;Dbxref=GenBank:WP_014613159.1;Name=WP_014613159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613159.1;locus_tag=CYJ01_RS03550;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_014613159.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 31522 31836 . - . ID=gene-CYJ01_RS03555;Name=CYJ01_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03555;old_locus_tag=CYJ01_03555 NZ_PJUR01000006.1 Protein Homology CDS 31522 31836 . - 0 ID=cds-WP_014613160.1;Parent=gene-CYJ01_RS03555;Dbxref=GenBank:WP_014613160.1;Name=WP_014613160.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219772.1;locus_tag=CYJ01_RS03555;product=DMT family transporter;protein_id=WP_014613160.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 31833 32159 . - . ID=gene-CYJ01_RS03560;Name=CYJ01_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03560;old_locus_tag=CYJ01_03560 NZ_PJUR01000006.1 Protein Homology CDS 31833 32159 . - 0 ID=cds-WP_014613161.1;Parent=gene-CYJ01_RS03560;Dbxref=GenBank:WP_014613161.1;Name=WP_014613161.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613161.1;locus_tag=CYJ01_RS03560;product=DMT family transporter;protein_id=WP_014613161.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 32470 33048 . - . ID=gene-CYJ01_RS03565;Name=CYJ01_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03565;old_locus_tag=CYJ01_03565 NZ_PJUR01000006.1 Protein Homology CDS 32470 33048 . - 0 ID=cds-WP_101457256.1;Parent=gene-CYJ01_RS03565;Dbxref=GenBank:WP_101457256.1;Name=WP_101457256.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=CYJ01_RS03565;product=CHAP domain-containing protein;protein_id=WP_101457256.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 33719 34795 . + . ID=gene-CYJ01_RS03570;Name=CYJ01_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03570;old_locus_tag=CYJ01_03570 NZ_PJUR01000006.1 Protein Homology CDS 33719 34795 . + 0 ID=cds-WP_014613163.1;Parent=gene-CYJ01_RS03570;Dbxref=GenBank:WP_014613163.1;Name=WP_014613163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=CYJ01_RS03570;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_014613163.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 34821 36218 . + . ID=gene-CYJ01_RS03575;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03575;old_locus_tag=CYJ01_03575 NZ_PJUR01000006.1 Protein Homology CDS 34821 36218 . + 0 ID=cds-WP_065520379.1;Parent=gene-CYJ01_RS03575;Dbxref=GenBank:WP_065520379.1;Name=WP_065520379.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613164.1;locus_tag=CYJ01_RS03575;product=Na+/H+ antiporter NhaC;protein_id=WP_065520379.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 36490 36966 . + . ID=gene-CYJ01_RS03580;Name=CYJ01_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03580;old_locus_tag=CYJ01_03580 NZ_PJUR01000006.1 Protein Homology CDS 36490 36966 . + 0 ID=cds-WP_014613165.1;Parent=gene-CYJ01_RS03580;Dbxref=GenBank:WP_014613165.1;Name=WP_014613165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=CYJ01_RS03580;product=hypothetical protein;protein_id=WP_014613165.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 37130 37858 . - . ID=gene-CYJ01_RS03585;Name=CYJ01_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03585;old_locus_tag=CYJ01_03585 NZ_PJUR01000006.1 Protein Homology CDS 37130 37858 . - 0 ID=cds-WP_015729537.1;Parent=gene-CYJ01_RS03585;Dbxref=GenBank:WP_015729537.1;Name=WP_015729537.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729537.1;locus_tag=CYJ01_RS03585;product=CHAP domain-containing protein;protein_id=WP_015729537.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 38563 39615 . + . ID=gene-CYJ01_RS03590;Name=CYJ01_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03590;old_locus_tag=CYJ01_03590 NZ_PJUR01000006.1 Protein Homology CDS 38563 39615 . + 0 ID=cds-WP_014613167.1;Parent=gene-CYJ01_RS03590;Dbxref=GenBank:WP_014613167.1;Name=WP_014613167.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=CYJ01_RS03590;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613167.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 39629 39982 . + . ID=gene-CYJ01_RS03595;Name=CYJ01_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03595;old_locus_tag=CYJ01_03595 NZ_PJUR01000006.1 Protein Homology CDS 39629 39982 . + 0 ID=cds-WP_014613168.1;Parent=gene-CYJ01_RS03595;Dbxref=GenBank:WP_014613168.1;Name=WP_014613168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=CYJ01_RS03595;product=DoxX family protein;protein_id=WP_014613168.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 40445 40792 . + . ID=gene-CYJ01_RS03600;Name=CYJ01_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03600;old_locus_tag=CYJ01_03600 NZ_PJUR01000006.1 Protein Homology CDS 40445 40792 . + 0 ID=cds-WP_070407687.1;Parent=gene-CYJ01_RS03600;Dbxref=GenBank:WP_070407687.1;Name=WP_070407687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=CYJ01_RS03600;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_070407687.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 41230 42390 . + . ID=gene-CYJ01_RS03605;Name=CYJ01_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03605;old_locus_tag=CYJ01_03605 NZ_PJUR01000006.1 Protein Homology CDS 41230 42390 . + 0 ID=cds-WP_101457257.1;Parent=gene-CYJ01_RS03605;Dbxref=GenBank:WP_101457257.1;Name=WP_101457257.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166578.1;locus_tag=CYJ01_RS03605;product=acyl-CoA dehydrogenase family protein;protein_id=WP_101457257.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 42514 42891 . + . ID=gene-CYJ01_RS03610;Name=CYJ01_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03610;old_locus_tag=CYJ01_03610 NZ_PJUR01000006.1 Protein Homology CDS 42514 42891 . + 0 ID=cds-WP_014613172.1;Parent=gene-CYJ01_RS03610;Dbxref=GenBank:WP_014613172.1;Name=WP_014613172.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=CYJ01_RS03610;product=YbaN family protein;protein_id=WP_014613172.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 43162 44085 . + . ID=gene-CYJ01_RS03615;Name=CYJ01_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03615;old_locus_tag=CYJ01_03615 NZ_PJUR01000006.1 Protein Homology CDS 43162 44085 . + 0 ID=cds-WP_101457258.1;Parent=gene-CYJ01_RS03615;Dbxref=GenBank:WP_101457258.1;Name=WP_101457258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729535.1;locus_tag=CYJ01_RS03615;product=ABC transporter substrate-binding protein;protein_id=WP_101457258.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 44537 46063 . - . ID=gene-CYJ01_RS03620;Name=CYJ01_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03620;old_locus_tag=CYJ01_03620 NZ_PJUR01000006.1 Protein Homology CDS 44537 46063 . - 0 ID=cds-WP_037542402.1;Parent=gene-CYJ01_RS03620;Dbxref=GenBank:WP_037542402.1;Name=WP_037542402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220283.1;locus_tag=CYJ01_RS03620;product=sodium:solute symporter family protein;protein_id=WP_037542402.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 46205 47086 . - . ID=gene-CYJ01_RS03625;Name=CYJ01_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03625;old_locus_tag=CYJ01_03625 NZ_PJUR01000006.1 Protein Homology CDS 46205 47086 . - 0 ID=cds-WP_101457259.1;Parent=gene-CYJ01_RS03625;Dbxref=GenBank:WP_101457259.1;Name=WP_101457259.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498885.1;locus_tag=CYJ01_RS03625;product=N-acetylneuraminate lyase;protein_id=WP_101457259.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 47245 47916 . + . ID=gene-CYJ01_RS03630;Name=CYJ01_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03630;old_locus_tag=CYJ01_03630 NZ_PJUR01000006.1 Protein Homology CDS 47245 47916 . + 0 ID=cds-WP_014613176.1;Parent=gene-CYJ01_RS03630;Dbxref=GenBank:WP_014613176.1;Name=WP_014613176.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166584.1;locus_tag=CYJ01_RS03630;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613176.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 47897 48760 . + . ID=gene-CYJ01_RS03635;Name=CYJ01_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03635;old_locus_tag=CYJ01_03635 NZ_PJUR01000006.1 Protein Homology CDS 47897 48760 . + 0 ID=cds-WP_014613177.1;Parent=gene-CYJ01_RS03635;Dbxref=GenBank:WP_014613177.1;Name=WP_014613177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613177.1;locus_tag=CYJ01_RS03635;product=ROK family protein;protein_id=WP_014613177.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 48841 49401 . + . ID=gene-CYJ01_RS03640;Name=CYJ01_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03640;old_locus_tag=CYJ01_03640 NZ_PJUR01000006.1 Protein Homology CDS 48841 49401 . + 0 ID=cds-WP_037542405.1;Parent=gene-CYJ01_RS03640;Dbxref=GenBank:WP_037542405.1;Name=WP_037542405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=CYJ01_RS03640;product=biotin transporter BioY;protein_id=WP_037542405.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 49424 50197 . + . ID=gene-CYJ01_RS03645;Name=CYJ01_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03645;old_locus_tag=CYJ01_03645 NZ_PJUR01000006.1 Protein Homology CDS 49424 50197 . + 0 ID=cds-WP_101457260.1;Parent=gene-CYJ01_RS03645;Dbxref=GenBank:WP_101457260.1;Name=WP_101457260.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729531.1;locus_tag=CYJ01_RS03645;product=GNAT family N-acetyltransferase;protein_id=WP_101457260.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 50275 51072 . - . ID=gene-CYJ01_RS03650;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CYJ01_RS03650;old_locus_tag=CYJ01_03650 NZ_PJUR01000006.1 Protein Homology CDS 50275 51072 . - 0 ID=cds-WP_015729530.1;Parent=gene-CYJ01_RS03650;Dbxref=GenBank:WP_015729530.1;Name=WP_015729530.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729530.1;locus_tag=CYJ01_RS03650;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_015729530.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 51231 52265 . + . ID=gene-CYJ01_RS03655;Name=CYJ01_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03655;old_locus_tag=CYJ01_03655 NZ_PJUR01000006.1 Protein Homology CDS 51231 52265 . + 0 ID=cds-WP_020220286.1;Parent=gene-CYJ01_RS03655;Dbxref=GenBank:WP_020220286.1;Name=WP_020220286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220286.1;locus_tag=CYJ01_RS03655;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220286.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 52308 53474 . + . ID=gene-CYJ01_RS03660;Name=CYJ01_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03660;old_locus_tag=CYJ01_03660 NZ_PJUR01000006.1 Protein Homology CDS 52308 53474 . + 0 ID=cds-WP_014613182.1;Parent=gene-CYJ01_RS03660;Dbxref=GenBank:WP_014613182.1;Name=WP_014613182.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729528.1;locus_tag=CYJ01_RS03660;product=galactokinase;protein_id=WP_014613182.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 53490 54482 . + . ID=gene-CYJ01_RS03665;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CYJ01_RS03665;old_locus_tag=CYJ01_03665 NZ_PJUR01000006.1 Protein Homology CDS 53490 54482 . + 0 ID=cds-WP_015729527.1;Parent=gene-CYJ01_RS03665;Dbxref=GenBank:WP_015729527.1;Name=WP_015729527.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613183.1;locus_tag=CYJ01_RS03665;product=UDP-glucose 4-epimerase GalE;protein_id=WP_015729527.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 54495 55994 . + . ID=gene-CYJ01_RS03670;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CYJ01_RS03670;old_locus_tag=CYJ01_03670 NZ_PJUR01000006.1 Protein Homology CDS 54495 55994 . + 0 ID=cds-WP_065354085.1;Parent=gene-CYJ01_RS03670;Dbxref=GenBank:WP_065354085.1;Name=WP_065354085.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729526.1;locus_tag=CYJ01_RS03670;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_065354085.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 56085 56858 . + . ID=gene-CYJ01_RS03675;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03675;old_locus_tag=CYJ01_03675 NZ_PJUR01000006.1 Protein Homology CDS 56085 56858 . + 0 ID=cds-WP_101457261.1;Parent=gene-CYJ01_RS03675;Dbxref=GenBank:WP_101457261.1;Name=WP_101457261.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=CYJ01_RS03675;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_101457261.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 56868 57539 . + . ID=gene-CYJ01_RS03680;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03680;old_locus_tag=CYJ01_03680 NZ_PJUR01000006.1 Protein Homology CDS 56868 57539 . + 0 ID=cds-WP_101457262.1;Parent=gene-CYJ01_RS03680;Dbxref=GenBank:WP_101457262.1;Name=WP_101457262.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832420.1;locus_tag=CYJ01_RS03680;product=molybdate ABC transporter permease subunit;protein_id=WP_101457262.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 57540 58145 . + . ID=gene-CYJ01_RS03685;Name=CYJ01_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03685;old_locus_tag=CYJ01_03685 NZ_PJUR01000006.1 Protein Homology CDS 57540 58145 . + 0 ID=cds-WP_014613187.1;Parent=gene-CYJ01_RS03685;Dbxref=GenBank:WP_014613187.1;Name=WP_014613187.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=CYJ01_RS03685;product=ATP-binding cassette domain-containing protein;protein_id=WP_014613187.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 58437 59441 . + . ID=gene-CYJ01_RS03690;Name=CYJ01_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03690;old_locus_tag=CYJ01_03690 NZ_PJUR01000006.1 Protein Homology CDS 58437 59441 . + 0 ID=cds-WP_233519819.1;Parent=gene-CYJ01_RS03690;Dbxref=GenBank:WP_233519819.1;Name=WP_233519819.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431689.1;locus_tag=CYJ01_RS03690;product=ThiF family adenylyltransferase;protein_id=WP_233519819.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 59457 59957 . + . ID=gene-CYJ01_RS03695;Name=CYJ01_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03695;old_locus_tag=CYJ01_03695 NZ_PJUR01000006.1 Protein Homology CDS 59457 59957 . + 0 ID=cds-WP_014613189.1;Parent=gene-CYJ01_RS03695;Dbxref=GenBank:WP_014613189.1;Name=WP_014613189.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613189.1;locus_tag=CYJ01_RS03695;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_014613189.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 60217 60702 . - . ID=gene-CYJ01_RS03700;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03700;old_locus_tag=CYJ01_03700 NZ_PJUR01000006.1 Protein Homology CDS 60217 60702 . - 0 ID=cds-WP_014613190.1;Parent=gene-CYJ01_RS03700;Dbxref=GenBank:WP_014613190.1;Name=WP_014613190.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166598.1;locus_tag=CYJ01_RS03700;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_014613190.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 60773 62032 . + . ID=gene-CYJ01_RS03705;Name=CYJ01_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03705;old_locus_tag=CYJ01_03705 NZ_PJUR01000006.1 Protein Homology CDS 60773 62032 . + 0 ID=cds-WP_037542418.1;Parent=gene-CYJ01_RS03705;Dbxref=GenBank:WP_037542418.1;Name=WP_037542418.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729524.1;locus_tag=CYJ01_RS03705;product=molybdopterin molybdotransferase MoeA;protein_id=WP_037542418.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 62029 62505 . + . ID=gene-CYJ01_RS03710;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03710;old_locus_tag=CYJ01_03710 NZ_PJUR01000006.1 Protein Homology CDS 62029 62505 . + 0 ID=cds-WP_101457264.1;Parent=gene-CYJ01_RS03710;Dbxref=GenBank:WP_101457264.1;Name=WP_101457264.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613192.1;locus_tag=CYJ01_RS03710;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_101457264.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 62511 62969 . + . ID=gene-CYJ01_RS03715;Name=CYJ01_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03715;old_locus_tag=CYJ01_03715 NZ_PJUR01000006.1 Protein Homology CDS 62511 62969 . + 0 ID=cds-WP_014613193.1;Parent=gene-CYJ01_RS03715;Dbxref=GenBank:WP_014613193.1;Name=WP_014613193.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613193.1;locus_tag=CYJ01_RS03715;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_014613193.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 62966 63199 . + . ID=gene-CYJ01_RS03720;Name=CYJ01_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03720;old_locus_tag=CYJ01_03720 NZ_PJUR01000006.1 Protein Homology CDS 62966 63199 . + 0 ID=cds-WP_014613194.1;Parent=gene-CYJ01_RS03720;Dbxref=GenBank:WP_014613194.1;Name=WP_014613194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=CYJ01_RS03720;product=MoaD/ThiS family protein;protein_id=WP_014613194.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 63209 63814 . + . ID=gene-CYJ01_RS03725;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03725;old_locus_tag=CYJ01_03725 NZ_PJUR01000006.1 Protein Homology CDS 63209 63814 . + 0 ID=cds-WP_014613195.1;Parent=gene-CYJ01_RS03725;Dbxref=GenBank:WP_014613195.1;Name=WP_014613195.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613195.1;locus_tag=CYJ01_RS03725;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_014613195.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 63831 64853 . + . ID=gene-CYJ01_RS03730;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03730;old_locus_tag=CYJ01_03730 NZ_PJUR01000006.1 Protein Homology CDS 63831 64853 . + 0 ID=cds-WP_037542424.1;Parent=gene-CYJ01_RS03730;Dbxref=GenBank:WP_037542424.1;Name=WP_037542424.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CYJ01_RS03730;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_037542424.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 64930 66801 . - . ID=gene-CYJ01_RS03735;Name=CYJ01_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03735;old_locus_tag=CYJ01_03735 NZ_PJUR01000006.1 Protein Homology CDS 64930 66801 . - 0 ID=cds-WP_101457265.1;Parent=gene-CYJ01_RS03735;Dbxref=GenBank:WP_101457265.1;Name=WP_101457265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=CYJ01_RS03735;product=DUF8508 domain-containing protein;protein_id=WP_101457265.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 67297 67743 . - . ID=gene-CYJ01_RS03740;Name=CYJ01_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03740;old_locus_tag=CYJ01_03740 NZ_PJUR01000006.1 Protein Homology CDS 67297 67743 . - 0 ID=cds-WP_020220116.1;Parent=gene-CYJ01_RS03740;Dbxref=GenBank:WP_020220116.1;Name=WP_020220116.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220116.1;locus_tag=CYJ01_RS03740;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_020220116.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 67917 68684 . + . ID=gene-CYJ01_RS03745;Name=CYJ01_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03745;old_locus_tag=CYJ01_03745 NZ_PJUR01000006.1 Protein Homology CDS 67917 68684 . + 0 ID=cds-WP_101457266.1;Parent=gene-CYJ01_RS03745;Dbxref=GenBank:WP_101457266.1;Name=WP_101457266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169683.1;locus_tag=CYJ01_RS03745;product=VOC family protein;protein_id=WP_101457266.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 68675 68929 . - . ID=gene-CYJ01_RS03750;Name=CYJ01_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03750;old_locus_tag=CYJ01_03750 NZ_PJUR01000006.1 Protein Homology CDS 68675 68929 . - 0 ID=cds-WP_101457267.1;Parent=gene-CYJ01_RS03750;Dbxref=GenBank:WP_101457267.1;Name=WP_101457267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166608.1;locus_tag=CYJ01_RS03750;product=hypothetical protein;protein_id=WP_101457267.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 69046 70326 . + . ID=gene-CYJ01_RS03755;Name=CYJ01_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03755;old_locus_tag=CYJ01_03755 NZ_PJUR01000006.1 Protein Homology CDS 69046 70326 . + 0 ID=cds-WP_020220115.1;Parent=gene-CYJ01_RS03755;Dbxref=GenBank:WP_020220115.1;Name=WP_020220115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220115.1;locus_tag=CYJ01_RS03755;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_020220115.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 70545 73697 . + . ID=gene-CYJ01_RS03760;Name=CYJ01_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03760;old_locus_tag=CYJ01_03760 NZ_PJUR01000006.1 Protein Homology CDS 70545 73697 . + 0 ID=cds-WP_101457268.1;Parent=gene-CYJ01_RS03760;Dbxref=GenBank:WP_101457268.1;Name=WP_101457268.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=CYJ01_RS03760;product=efflux RND transporter permease subunit;protein_id=WP_101457268.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 73901 75058 . + . ID=gene-CYJ01_RS03765;Name=CYJ01_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03765;old_locus_tag=CYJ01_03765 NZ_PJUR01000006.1 Protein Homology CDS 73901 75058 . + 0 ID=cds-WP_096533503.1;Parent=gene-CYJ01_RS03765;Dbxref=GenBank:WP_096533503.1;Name=WP_096533503.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613203.1;locus_tag=CYJ01_RS03765;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_096533503.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 75197 75514 . - . ID=gene-CYJ01_RS03770;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03770;old_locus_tag=CYJ01_03770 NZ_PJUR01000006.1 Protein Homology CDS 75197 75514 . - 0 ID=cds-WP_096533504.1;Parent=gene-CYJ01_RS03770;Dbxref=GenBank:WP_096533504.1;Name=WP_096533504.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=CYJ01_RS03770;product=membrane stabilizing protein MspA;protein_id=WP_096533504.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 75584 75754 . - . ID=gene-CYJ01_RS12085;Name=CYJ01_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12085 NZ_PJUR01000006.1 Protein Homology CDS 75584 75754 . - 0 ID=cds-WP_014613205.1;Parent=gene-CYJ01_RS12085;Dbxref=GenBank:WP_014613205.1;Name=WP_014613205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613205.1;locus_tag=CYJ01_RS12085;product=SE1832 family protein;protein_id=WP_014613205.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 75861 76769 . + . ID=gene-CYJ01_RS03775;Name=CYJ01_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03775;old_locus_tag=CYJ01_03775 NZ_PJUR01000006.1 Protein Homology CDS 75861 76769 . + 0 ID=cds-WP_096533505.1;Parent=gene-CYJ01_RS03775;Dbxref=GenBank:WP_096533505.1;Name=WP_096533505.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613206.1;locus_tag=CYJ01_RS03775;product=AEC family transporter;protein_id=WP_096533505.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 76851 77711 . - . ID=gene-CYJ01_RS03780;Name=CYJ01_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03780;old_locus_tag=CYJ01_03780 NZ_PJUR01000006.1 Protein Homology CDS 76851 77711 . - 0 ID=cds-WP_101457269.1;Parent=gene-CYJ01_RS03780;Dbxref=GenBank:WP_101457269.1;Name=WP_101457269.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=CYJ01_RS03780;product=GNAT family N-acetyltransferase;protein_id=WP_101457269.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 77852 79987 . + . ID=gene-CYJ01_RS03785;Name=CYJ01_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03785;old_locus_tag=CYJ01_03785 NZ_PJUR01000006.1 Protein Homology CDS 77852 79987 . + 0 ID=cds-WP_101457270.1;Parent=gene-CYJ01_RS03785;Dbxref=GenBank:WP_101457270.1;Name=WP_101457270.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729516.1;locus_tag=CYJ01_RS03785;product=DNA topoisomerase III;protein_id=WP_101457270.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 80108 81442 . + . ID=gene-CYJ01_RS03790;Name=CYJ01_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03790;old_locus_tag=CYJ01_03790 NZ_PJUR01000006.1 Protein Homology CDS 80108 81442 . + 0 ID=cds-WP_014613209.1;Parent=gene-CYJ01_RS03790;Dbxref=GenBank:WP_014613209.1;Name=WP_014613209.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=CYJ01_RS03790;product=NCS2 family permease;protein_id=WP_014613209.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 81592 81849 . + . ID=gene-CYJ01_RS12225;Name=CYJ01_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12225 NZ_PJUR01000006.1 GeneMarkS-2+ CDS 81592 81849 . + 0 ID=cds-WP_241900524.1;Parent=gene-CYJ01_RS12225;Dbxref=GenBank:WP_241900524.1;Name=WP_241900524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12225;product=hypothetical protein;protein_id=WP_241900524.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 82003 82164 . + . ID=gene-CYJ01_RS12230;Name=CYJ01_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12230 NZ_PJUR01000006.1 Protein Homology CDS 82003 82164 . + 0 ID=cds-WP_341458023.1;Parent=gene-CYJ01_RS12230;Dbxref=GenBank:WP_341458023.1;Name=WP_341458023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.7;locus_tag=CYJ01_RS12230;product=group II intron maturase-specific domain-containing protein;protein_id=WP_341458023.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 82783 83169 . - . ID=gene-CYJ01_RS03800;Name=CYJ01_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03800;old_locus_tag=CYJ01_03800 NZ_PJUR01000006.1 Protein Homology CDS 82783 83169 . - 0 ID=cds-WP_015729513.1;Parent=gene-CYJ01_RS03800;Dbxref=GenBank:WP_015729513.1;Name=WP_015729513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729513.1;locus_tag=CYJ01_RS03800;product=hypothetical protein;protein_id=WP_015729513.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 83633 83941 . + . ID=gene-CYJ01_RS03805;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS03805;old_locus_tag=CYJ01_03805 NZ_PJUR01000006.1 Protein Homology CDS 83633 83941 . + 0 ID=cds-WP_014613211.1;Parent=gene-CYJ01_RS03805;Dbxref=GenBank:WP_014613211.1;Name=WP_014613211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CYJ01_RS03805;product=30S ribosomal protein S10;protein_id=WP_014613211.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 83969 84628 . + . ID=gene-CYJ01_RS03810;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03810;old_locus_tag=CYJ01_03810 NZ_PJUR01000006.1 Protein Homology CDS 83969 84628 . + 0 ID=cds-WP_014613212.1;Parent=gene-CYJ01_RS03810;Dbxref=GenBank:WP_014613212.1;Name=WP_014613212.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=CYJ01_RS03810;product=50S ribosomal protein L3;protein_id=WP_014613212.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 84655 85278 . + . ID=gene-CYJ01_RS03815;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CYJ01_RS03815;old_locus_tag=CYJ01_03815 NZ_PJUR01000006.1 Protein Homology CDS 84655 85278 . + 0 ID=cds-WP_014613213.1;Parent=gene-CYJ01_RS03815;Dbxref=GenBank:WP_014613213.1;Name=WP_014613213.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=CYJ01_RS03815;product=50S ribosomal protein L4;protein_id=WP_014613213.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 85278 85553 . + . ID=gene-CYJ01_RS03820;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CYJ01_RS03820;old_locus_tag=CYJ01_03820 NZ_PJUR01000006.1 Protein Homology CDS 85278 85553 . + 0 ID=cds-WP_014613214.1;Parent=gene-CYJ01_RS03820;Dbxref=GenBank:WP_014613214.1;Name=WP_014613214.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CYJ01_RS03820;product=50S ribosomal protein L23;protein_id=WP_014613214.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 85585 86418 . + . ID=gene-CYJ01_RS03825;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CYJ01_RS03825;old_locus_tag=CYJ01_03825 NZ_PJUR01000006.1 Protein Homology CDS 85585 86418 . + 0 ID=cds-WP_014613215.1;Parent=gene-CYJ01_RS03825;Dbxref=GenBank:WP_014613215.1;Name=WP_014613215.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=CYJ01_RS03825;product=50S ribosomal protein L2;protein_id=WP_014613215.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 86483 86761 . + . ID=gene-CYJ01_RS03830;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CYJ01_RS03830;old_locus_tag=CYJ01_03830 NZ_PJUR01000006.1 Protein Homology CDS 86483 86761 . + 0 ID=cds-WP_014613216.1;Parent=gene-CYJ01_RS03830;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=CYJ01_RS03830;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 86795 87148 . + . ID=gene-CYJ01_RS03835;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CYJ01_RS03835;old_locus_tag=CYJ01_03835 NZ_PJUR01000006.1 Protein Homology CDS 86795 87148 . + 0 ID=cds-WP_014613217.1;Parent=gene-CYJ01_RS03835;Dbxref=GenBank:WP_014613217.1;Name=WP_014613217.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CYJ01_RS03835;product=50S ribosomal protein L22;protein_id=WP_014613217.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 87172 87825 . + . ID=gene-CYJ01_RS03840;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03840;old_locus_tag=CYJ01_03840 NZ_PJUR01000006.1 Protein Homology CDS 87172 87825 . + 0 ID=cds-WP_014613218.1;Parent=gene-CYJ01_RS03840;Dbxref=GenBank:WP_014613218.1;Name=WP_014613218.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=CYJ01_RS03840;product=30S ribosomal protein S3;protein_id=WP_014613218.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 87828 88262 . + . ID=gene-CYJ01_RS03845;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CYJ01_RS03845;old_locus_tag=CYJ01_03845 NZ_PJUR01000006.1 Protein Homology CDS 87828 88262 . + 0 ID=cds-WP_014613219.1;Parent=gene-CYJ01_RS03845;Dbxref=GenBank:WP_014613219.1;Name=WP_014613219.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CYJ01_RS03845;product=50S ribosomal protein L16;protein_id=WP_014613219.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 88252 88461 . + . ID=gene-CYJ01_RS03850;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CYJ01_RS03850;old_locus_tag=CYJ01_03850 NZ_PJUR01000006.1 Protein Homology CDS 88252 88461 . + 0 ID=cds-WP_014613220.1;Parent=gene-CYJ01_RS03850;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CYJ01_RS03850;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 88487 88750 . + . ID=gene-CYJ01_RS03855;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS03855;old_locus_tag=CYJ01_03855 NZ_PJUR01000006.1 Protein Homology CDS 88487 88750 . + 0 ID=cds-WP_014613221.1;Parent=gene-CYJ01_RS03855;Dbxref=GenBank:WP_014613221.1;Name=WP_014613221.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CYJ01_RS03855;product=30S ribosomal protein S17;protein_id=WP_014613221.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 88779 89147 . + . ID=gene-CYJ01_RS03860;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CYJ01_RS03860;old_locus_tag=CYJ01_03860 NZ_PJUR01000006.1 Protein Homology CDS 88779 89147 . + 0 ID=cds-WP_014613222.1;Parent=gene-CYJ01_RS03860;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=CYJ01_RS03860;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 89191 89505 . + . ID=gene-CYJ01_RS03865;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CYJ01_RS03865;old_locus_tag=CYJ01_03865 NZ_PJUR01000006.1 Protein Homology CDS 89191 89505 . + 0 ID=cds-WP_014613223.1;Parent=gene-CYJ01_RS03865;Dbxref=GenBank:WP_014613223.1;Name=WP_014613223.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613223.1;locus_tag=CYJ01_RS03865;product=50S ribosomal protein L24;protein_id=WP_014613223.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 89531 90070 . + . ID=gene-CYJ01_RS03870;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CYJ01_RS03870;old_locus_tag=CYJ01_03870 NZ_PJUR01000006.1 Protein Homology CDS 89531 90070 . + 0 ID=cds-WP_014613224.1;Parent=gene-CYJ01_RS03870;Dbxref=GenBank:WP_014613224.1;Name=WP_014613224.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=CYJ01_RS03870;product=50S ribosomal protein L5;protein_id=WP_014613224.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 90092 90277 . + . ID=gene-CYJ01_RS03875;Name=CYJ01_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03875;old_locus_tag=CYJ01_03875 NZ_PJUR01000006.1 Protein Homology CDS 90092 90277 . + 0 ID=cds-WP_014613225.1;Parent=gene-CYJ01_RS03875;Dbxref=GenBank:WP_014613225.1;Name=WP_014613225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=CYJ01_RS03875;product=type Z 30S ribosomal protein S14;protein_id=WP_014613225.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 90308 90706 . + . ID=gene-CYJ01_RS03880;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CYJ01_RS03880;old_locus_tag=CYJ01_03880 NZ_PJUR01000006.1 Protein Homology CDS 90308 90706 . + 0 ID=cds-WP_014613226.1;Parent=gene-CYJ01_RS03880;Dbxref=GenBank:WP_014613226.1;Name=WP_014613226.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CYJ01_RS03880;product=30S ribosomal protein S8;protein_id=WP_014613226.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 90735 91271 . + . ID=gene-CYJ01_RS03885;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CYJ01_RS03885;old_locus_tag=CYJ01_03885 NZ_PJUR01000006.1 Protein Homology CDS 90735 91271 . + 0 ID=cds-WP_014613227.1;Parent=gene-CYJ01_RS03885;Dbxref=GenBank:WP_014613227.1;Name=WP_014613227.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CYJ01_RS03885;product=50S ribosomal protein L6;protein_id=WP_014613227.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 91303 91662 . + . ID=gene-CYJ01_RS03890;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CYJ01_RS03890;old_locus_tag=CYJ01_03890 NZ_PJUR01000006.1 Protein Homology CDS 91303 91662 . + 0 ID=cds-WP_014613228.1;Parent=gene-CYJ01_RS03890;Dbxref=GenBank:WP_014613228.1;Name=WP_014613228.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CYJ01_RS03890;product=50S ribosomal protein L18;protein_id=WP_014613228.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 91685 92185 . + . ID=gene-CYJ01_RS03895;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CYJ01_RS03895;old_locus_tag=CYJ01_03895 NZ_PJUR01000006.1 Protein Homology CDS 91685 92185 . + 0 ID=cds-WP_014613229.1;Parent=gene-CYJ01_RS03895;Dbxref=GenBank:WP_014613229.1;Name=WP_014613229.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CYJ01_RS03895;product=30S ribosomal protein S5;protein_id=WP_014613229.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 92202 92381 . + . ID=gene-CYJ01_RS03900;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CYJ01_RS03900;old_locus_tag=CYJ01_03900 NZ_PJUR01000006.1 Protein Homology CDS 92202 92381 . + 0 ID=cds-WP_014613230.1;Parent=gene-CYJ01_RS03900;Dbxref=GenBank:WP_014613230.1;Name=WP_014613230.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=CYJ01_RS03900;product=50S ribosomal protein L30;protein_id=WP_014613230.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 92398 92838 . + . ID=gene-CYJ01_RS03905;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CYJ01_RS03905;old_locus_tag=CYJ01_03905 NZ_PJUR01000006.1 Protein Homology CDS 92398 92838 . + 0 ID=cds-WP_101457271.1;Parent=gene-CYJ01_RS03905;Dbxref=GenBank:WP_101457271.1;Name=WP_101457271.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=CYJ01_RS03905;product=50S ribosomal protein L15;protein_id=WP_101457271.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 92838 94130 . + . ID=gene-CYJ01_RS03910;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CYJ01_RS03910;old_locus_tag=CYJ01_03910 NZ_PJUR01000006.1 Protein Homology CDS 92838 94130 . + 0 ID=cds-WP_101457272.1;Parent=gene-CYJ01_RS03910;Dbxref=GenBank:WP_101457272.1;Name=WP_101457272.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CYJ01_RS03910;product=preprotein translocase subunit SecY;protein_id=WP_101457272.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 94148 94801 . + . ID=gene-CYJ01_RS03915;Name=CYJ01_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03915;old_locus_tag=CYJ01_03915 NZ_PJUR01000006.1 Protein Homology CDS 94148 94801 . + 0 ID=cds-WP_014613233.1;Parent=gene-CYJ01_RS03915;Dbxref=GenBank:WP_014613233.1;Name=WP_014613233.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613233.1;locus_tag=CYJ01_RS03915;product=adenylate kinase;protein_id=WP_014613233.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 94968 95186 . + . ID=gene-CYJ01_RS03920;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03920;old_locus_tag=CYJ01_03920 NZ_PJUR01000006.1 Protein Homology CDS 94968 95186 . + 0 ID=cds-WP_001118443.1;Parent=gene-CYJ01_RS03920;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=CYJ01_RS03920;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 95218 95331 . + . ID=gene-CYJ01_RS03925;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CYJ01_RS03925;old_locus_tag=CYJ01_03925 NZ_PJUR01000006.1 Protein Homology CDS 95218 95331 . + 0 ID=cds-WP_002509257.1;Parent=gene-CYJ01_RS03925;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=CYJ01_RS03925;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 95355 95720 . + . ID=gene-CYJ01_RS03930;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CYJ01_RS03930;old_locus_tag=CYJ01_03930 NZ_PJUR01000006.1 Protein Homology CDS 95355 95720 . + 0 ID=cds-WP_014613234.1;Parent=gene-CYJ01_RS03930;Dbxref=GenBank:WP_014613234.1;Name=WP_014613234.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CYJ01_RS03930;product=30S ribosomal protein S13;protein_id=WP_014613234.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 95745 96134 . + . ID=gene-CYJ01_RS03935;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CYJ01_RS03935;old_locus_tag=CYJ01_03935 NZ_PJUR01000006.1 Protein Homology CDS 95745 96134 . + 0 ID=cds-WP_014613235.1;Parent=gene-CYJ01_RS03935;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CYJ01_RS03935;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 96210 97154 . + . ID=gene-CYJ01_RS03940;Name=CYJ01_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03940;old_locus_tag=CYJ01_03940 NZ_PJUR01000006.1 Protein Homology CDS 96210 97154 . + 0 ID=cds-WP_014613236.1;Parent=gene-CYJ01_RS03940;Dbxref=GenBank:WP_014613236.1;Name=WP_014613236.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CYJ01_RS03940;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014613236.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 97171 97539 . + . ID=gene-CYJ01_RS03945;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS03945;old_locus_tag=CYJ01_03945 NZ_PJUR01000006.1 Protein Homology CDS 97171 97539 . + 0 ID=cds-WP_014613237.1;Parent=gene-CYJ01_RS03945;Dbxref=GenBank:WP_014613237.1;Name=WP_014613237.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CYJ01_RS03945;product=50S ribosomal protein L17;protein_id=WP_014613237.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 98020 98829 . + . ID=gene-CYJ01_RS03950;Name=CYJ01_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03950;old_locus_tag=CYJ01_03950 NZ_PJUR01000006.1 Protein Homology CDS 98020 98829 . + 0 ID=cds-WP_070407675.1;Parent=gene-CYJ01_RS03950;Dbxref=GenBank:WP_070407675.1;Name=WP_070407675.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167910.1;locus_tag=CYJ01_RS03950;product=energy-coupling factor transporter ATPase;protein_id=WP_070407675.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 98826 99692 . + . ID=gene-CYJ01_RS03955;Name=CYJ01_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03955;old_locus_tag=CYJ01_03955 NZ_PJUR01000006.1 Protein Homology CDS 98826 99692 . + 0 ID=cds-WP_099986752.1;Parent=gene-CYJ01_RS03955;Dbxref=GenBank:WP_099986752.1;Name=WP_099986752.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166626.1;locus_tag=CYJ01_RS03955;product=energy-coupling factor transporter ATPase;protein_id=WP_099986752.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 99682 100485 . + . ID=gene-CYJ01_RS03960;Name=CYJ01_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03960;old_locus_tag=CYJ01_03960 NZ_PJUR01000006.1 Protein Homology CDS 99682 100485 . + 0 ID=cds-WP_014613240.1;Parent=gene-CYJ01_RS03960;Dbxref=GenBank:WP_014613240.1;Name=WP_014613240.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613240.1;locus_tag=CYJ01_RS03960;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_014613240.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 100501 101304 . + . ID=gene-CYJ01_RS03965;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CYJ01_RS03965;old_locus_tag=CYJ01_03965 NZ_PJUR01000006.1 Protein Homology CDS 100501 101304 . + 0 ID=cds-WP_063284678.1;Parent=gene-CYJ01_RS03965;Dbxref=GenBank:WP_063284678.1;Name=WP_063284678.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167913.1;locus_tag=CYJ01_RS03965;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_063284678.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 101513 101950 . + . ID=gene-CYJ01_RS03970;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CYJ01_RS03970;old_locus_tag=CYJ01_03970 NZ_PJUR01000006.1 Protein Homology CDS 101513 101950 . + 0 ID=cds-WP_014613242.1;Parent=gene-CYJ01_RS03970;Dbxref=GenBank:WP_014613242.1;Name=WP_014613242.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CYJ01_RS03970;product=50S ribosomal protein L13;protein_id=WP_014613242.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 101970 102362 . + . ID=gene-CYJ01_RS03975;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ01_RS03975;old_locus_tag=CYJ01_03975 NZ_PJUR01000006.1 Protein Homology CDS 101970 102362 . + 0 ID=cds-WP_037542446.1;Parent=gene-CYJ01_RS03975;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=CYJ01_RS03975;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11 NZ_PJUR01000006.1 RefSeq gene 102376 102564 . - . ID=gene-CYJ01_RS12180;Name=CYJ01_RS12180;end_range=102564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12180;partial=true NZ_PJUR01000006.1 GeneMarkS-2+ CDS 102376 102564 . - 0 ID=cds-WP_206747266.1;Parent=gene-CYJ01_RS12180;Dbxref=GenBank:WP_206747266.1;Name=WP_206747266.1;end_range=102564,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12180;partial=true;product=hypothetical protein;protein_id=WP_206747266.1;transl_table=11 ##sequence-region NZ_PJUR01000060.1 1 3762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000060.1 RefSeq region 1 3762 . + . ID=NZ_PJUR01000060.1:1..3762;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000060.1 RefSeq gene 1 2988 . - . ID=gene-CYJ01_RS11585;Name=CYJ01_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11585;old_locus_tag=CYJ01_11590;partial=true;start_range=.,1 NZ_PJUR01000060.1 Protein Homology CDS 1 2988 . - 0 ID=cds-WP_101457582.1;Parent=gene-CYJ01_RS11585;Dbxref=GenBank:WP_101457582.1;Name=WP_101457582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ01_RS11585;partial=true;product=SdrD B-like domain-containing protein;protein_id=WP_101457582.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000061.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000061.1 RefSeq region 1 291 . + . ID=NZ_PJUR01000061.1:1..291;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000061.1 RefSeq gene 1 291 . - . ID=gene-CYJ01_RS11590;Name=CYJ01_RS11590;end_range=291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11590;old_locus_tag=CYJ01_11595;partial=true;start_range=.,1 NZ_PJUR01000061.1 Protein Homology CDS 1 291 . - 2 ID=cds-WP_133121623.1;Parent=gene-CYJ01_RS11590;Dbxref=GenBank:WP_133121623.1;Name=WP_133121623.1;end_range=291,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ01_RS11590;partial=true;product=YPDG domain-containing protein;protein_id=WP_133121623.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000062.1 1 5366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000062.1 RefSeq region 1 5366 . + . ID=NZ_PJUR01000062.1:1..5366;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000062.1 RefSeq pseudogene 1 85 . - . ID=gene-CYJ01_RS12350;Name=CYJ01_RS12350;end_range=85,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12350;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000062.1 Protein Homology CDS 1 85 . - 0 ID=cds-CYJ01_RS12350;Parent=gene-CYJ01_RS12350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=85,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500605.1;locus_tag=CYJ01_RS12350;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUR01000062.1 RefSeq gene 618 1985 . - . ID=gene-CYJ01_RS11595;Name=CYJ01_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11595;old_locus_tag=CYJ01_11600 NZ_PJUR01000062.1 Protein Homology CDS 618 1985 . - 0 ID=cds-WP_181137781.1;Parent=gene-CYJ01_RS11595;Dbxref=GenBank:WP_181137781.1;Name=WP_181137781.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ01_RS11595;product=ATP-binding cassette domain-containing protein;protein_id=WP_181137781.1;transl_table=11 NZ_PJUR01000062.1 RefSeq gene 1999 3189 . - . ID=gene-CYJ01_RS11600;Name=CYJ01_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11600;old_locus_tag=CYJ01_11605 NZ_PJUR01000062.1 Protein Homology CDS 1999 3189 . - 0 ID=cds-WP_101457584.1;Parent=gene-CYJ01_RS11600;Dbxref=GenBank:WP_101457584.1;Name=WP_101457584.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ01_RS11600;product=MFS transporter;protein_id=WP_101457584.1;transl_table=11 NZ_PJUR01000062.1 RefSeq gene 3200 4243 . - . ID=gene-CYJ01_RS11605;Name=CYJ01_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11605;old_locus_tag=CYJ01_11610 NZ_PJUR01000062.1 Protein Homology CDS 3200 4243 . - 0 ID=cds-WP_014613464.1;Parent=gene-CYJ01_RS11605;Dbxref=GenBank:WP_014613464.1;Name=WP_014613464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014661.7;locus_tag=CYJ01_RS11605;product=YcaO-like family protein;protein_id=WP_014613464.1;transl_table=11 NZ_PJUR01000062.1 RefSeq gene 4296 5045 . - . ID=gene-CYJ01_RS11610;Name=CYJ01_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11610;old_locus_tag=CYJ01_11615 NZ_PJUR01000062.1 GeneMarkS-2+ CDS 4296 5045 . - 0 ID=cds-WP_037542633.1;Parent=gene-CYJ01_RS11610;Dbxref=GenBank:WP_037542633.1;Name=WP_037542633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11610;product=hypothetical protein;protein_id=WP_037542633.1;transl_table=11 ##sequence-region NZ_PJUR01000063.1 1 4070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000063.1 RefSeq region 1 4070 . + . ID=NZ_PJUR01000063.1:1..4070;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000063.1 RefSeq gene 212 1486 . + . ID=gene-CYJ01_RS11615;Name=CYJ01_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11615;old_locus_tag=CYJ01_11620 NZ_PJUR01000063.1 Protein Homology CDS 212 1486 . + 0 ID=cds-WP_096536214.1;Parent=gene-CYJ01_RS11615;Dbxref=GenBank:WP_096536214.1;Name=WP_096536214.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728936.1;locus_tag=CYJ01_RS11615;product=nucleotide sugar dehydrogenase;protein_id=WP_096536214.1;transl_table=11 NZ_PJUR01000063.1 RefSeq gene 1617 2549 . + . ID=gene-CYJ01_RS11620;Name=CYJ01_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11620;old_locus_tag=CYJ01_11625 NZ_PJUR01000063.1 Protein Homology CDS 1617 2549 . + 0 ID=cds-WP_063278794.1;Parent=gene-CYJ01_RS11620;Dbxref=GenBank:WP_063278794.1;Name=WP_063278794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=CYJ01_RS11620;product=hypothetical protein;protein_id=WP_063278794.1;transl_table=11 NZ_PJUR01000063.1 RefSeq gene 2551 4070 . + . ID=gene-CYJ01_RS11625;Name=CYJ01_RS11625;end_range=4070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11625;old_locus_tag=CYJ01_11630;partial=true NZ_PJUR01000063.1 Protein Homology CDS 2551 4070 . + 0 ID=cds-WP_423830986.1;Parent=gene-CYJ01_RS11625;Dbxref=GenBank:WP_423830986.1;Name=WP_423830986.1;end_range=4070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=CYJ01_RS11625;partial=true;product=CgeB family protein;protein_id=WP_423830986.1;transl_table=11 ##sequence-region NZ_PJUR01000064.1 1 1857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000064.1 RefSeq region 1 1857 . + . ID=NZ_PJUR01000064.1:1..1857;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000064.1 RefSeq pseudogene 1 1857 . + . ID=gene-CYJ01_RS12355;Name=CYJ01_RS12355;end_range=1857,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12355;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000064.1 GeneMarkS-2+ CDS 1 1857 . + 2 ID=cds-CYJ01_RS12355;Parent=gene-CYJ01_RS12355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1857,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12355;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000065.1 1 3632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000065.1 RefSeq region 1 3632 . + . ID=NZ_PJUR01000065.1:1..3632;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000065.1 RefSeq gene 76 150 . + . ID=gene-CYJ01_RS11635;Name=CYJ01_RS11635;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11635;old_locus_tag=CYJ01_11640 NZ_PJUR01000065.1 tRNAscan-SE tRNA 76 150 . + . ID=rna-CYJ01_RS11635;Parent=gene-CYJ01_RS11635;anticodon=(pos:108..110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11635;product=tRNA-Asn NZ_PJUR01000065.1 tRNAscan-SE exon 76 150 . + . ID=exon-CYJ01_RS11635-1;Parent=rna-CYJ01_RS11635;anticodon=(pos:108..110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11635;product=tRNA-Asn NZ_PJUR01000065.1 RefSeq gene 152 223 . + . ID=gene-CYJ01_RS11640;Name=CYJ01_RS11640;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11640;old_locus_tag=CYJ01_11645 NZ_PJUR01000065.1 tRNAscan-SE tRNA 152 223 . + . ID=rna-CYJ01_RS11640;Parent=gene-CYJ01_RS11640;anticodon=(pos:185..187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11640;product=tRNA-Glu NZ_PJUR01000065.1 tRNAscan-SE exon 152 223 . + . ID=exon-CYJ01_RS11640-1;Parent=rna-CYJ01_RS11640;anticodon=(pos:185..187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11640;product=tRNA-Glu NZ_PJUR01000065.1 RefSeq gene 273 361 . + . ID=gene-CYJ01_RS11645;Name=CYJ01_RS11645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11645;old_locus_tag=CYJ01_11650 NZ_PJUR01000065.1 tRNAscan-SE tRNA 273 361 . + . ID=rna-CYJ01_RS11645;Parent=gene-CYJ01_RS11645;anticodon=(pos:308..310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11645;product=tRNA-Ser NZ_PJUR01000065.1 tRNAscan-SE exon 273 361 . + . ID=exon-CYJ01_RS11645-1;Parent=rna-CYJ01_RS11645;anticodon=(pos:308..310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11645;product=tRNA-Ser NZ_PJUR01000065.1 RefSeq gene 979 1083 . + . ID=gene-CYJ01_RS11650;Name=CYJ01_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11650;old_locus_tag=CYJ01_11655 NZ_PJUR01000065.1 Protein Homology CDS 979 1083 . + 0 ID=cds-WP_101431332.1;Parent=gene-CYJ01_RS11650;Dbxref=GenBank:WP_101431332.1;Name=WP_101431332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.7;locus_tag=CYJ01_RS11650;product=putative holin-like toxin;protein_id=WP_101431332.1;transl_table=11 NZ_PJUR01000065.1 RefSeq gene 1458 2852 . + . ID=gene-CYJ01_RS11655;Name=CYJ01_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11655;old_locus_tag=CYJ01_11660 NZ_PJUR01000065.1 Protein Homology CDS 1458 2852 . + 0 ID=cds-WP_241900546.1;Parent=gene-CYJ01_RS11655;Dbxref=GenBank:WP_241900546.1;Name=WP_241900546.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219639.1;locus_tag=CYJ01_RS11655;product=minor capsid protein;protein_id=WP_241900546.1;transl_table=11 NZ_PJUR01000065.1 RefSeq gene 2864 3106 . + . ID=gene-CYJ01_RS11660;Name=CYJ01_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11660;old_locus_tag=CYJ01_11665 NZ_PJUR01000065.1 Protein Homology CDS 2864 3106 . + 0 ID=cds-WP_020219638.1;Parent=gene-CYJ01_RS11660;Dbxref=GenBank:WP_020219638.1;Name=WP_020219638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219638.1;locus_tag=CYJ01_RS11660;product=hypothetical protein;protein_id=WP_020219638.1;transl_table=11 NZ_PJUR01000065.1 RefSeq gene 3291 3632 . + . ID=gene-CYJ01_RS11665;Name=CYJ01_RS11665;end_range=3632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11665;old_locus_tag=CYJ01_11670;partial=true NZ_PJUR01000065.1 Protein Homology CDS 3291 3632 . + 0 ID=cds-WP_133121624.1;Parent=gene-CYJ01_RS11665;Dbxref=GenBank:WP_133121624.1;Name=WP_133121624.1;end_range=3632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ01_RS11665;partial=true;product=capsid assembly scaffolding protein Gp46 family protein;protein_id=WP_133121624.1;transl_table=11 ##sequence-region NZ_PJUR01000066.1 1 3237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000066.1 RefSeq region 1 3237 . + . ID=NZ_PJUR01000066.1:1..3237;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000066.1 RefSeq gene 1 69 . + . ID=gene-CYJ01_RS11670;Name=CYJ01_RS11670;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11670;old_locus_tag=CYJ01_11675 NZ_PJUR01000066.1 tRNAscan-SE tRNA 1 69 . + . ID=rna-CYJ01_RS11670;Parent=gene-CYJ01_RS11670;anticodon=(pos:30..32);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11670;product=tRNA-Phe NZ_PJUR01000066.1 tRNAscan-SE exon 1 69 . + . ID=exon-CYJ01_RS11670-1;Parent=rna-CYJ01_RS11670;anticodon=(pos:30..32);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11670;product=tRNA-Phe NZ_PJUR01000066.1 RefSeq gene 84 156 . + . ID=gene-CYJ01_RS11675;Name=CYJ01_RS11675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11675;old_locus_tag=CYJ01_11680 NZ_PJUR01000066.1 tRNAscan-SE tRNA 84 156 . + . ID=rna-CYJ01_RS11675;Parent=gene-CYJ01_RS11675;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11675;product=tRNA-His NZ_PJUR01000066.1 tRNAscan-SE exon 84 156 . + . ID=exon-CYJ01_RS11675-1;Parent=rna-CYJ01_RS11675;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11675;product=tRNA-His NZ_PJUR01000066.1 RefSeq gene 176 249 . + . ID=gene-CYJ01_RS11680;Name=CYJ01_RS11680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11680;old_locus_tag=CYJ01_11685 NZ_PJUR01000066.1 tRNAscan-SE tRNA 176 249 . + . ID=rna-CYJ01_RS11680;Parent=gene-CYJ01_RS11680;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11680;product=tRNA-Gly NZ_PJUR01000066.1 tRNAscan-SE exon 176 249 . + . ID=exon-CYJ01_RS11680-1;Parent=rna-CYJ01_RS11680;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11680;product=tRNA-Gly NZ_PJUR01000066.1 RefSeq gene 257 331 . + . ID=gene-CYJ01_RS11685;Name=CYJ01_RS11685;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11685;old_locus_tag=CYJ01_11690 NZ_PJUR01000066.1 tRNAscan-SE tRNA 257 331 . + . ID=rna-CYJ01_RS11685;Parent=gene-CYJ01_RS11685;anticodon=(pos:289..291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11685;product=tRNA-Asn NZ_PJUR01000066.1 tRNAscan-SE exon 257 331 . + . ID=exon-CYJ01_RS11685-1;Parent=rna-CYJ01_RS11685;anticodon=(pos:289..291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11685;product=tRNA-Asn NZ_PJUR01000066.1 RefSeq gene 333 421 . + . ID=gene-CYJ01_RS11690;Name=CYJ01_RS11690;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11690;old_locus_tag=CYJ01_11695 NZ_PJUR01000066.1 tRNAscan-SE tRNA 333 421 . + . ID=rna-CYJ01_RS11690;Parent=gene-CYJ01_RS11690;anticodon=(pos:368..370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11690;product=tRNA-Ser NZ_PJUR01000066.1 tRNAscan-SE exon 333 421 . + . ID=exon-CYJ01_RS11690-1;Parent=rna-CYJ01_RS11690;anticodon=(pos:368..370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11690;product=tRNA-Ser NZ_PJUR01000066.1 RefSeq gene 967 1143 . - . ID=gene-CYJ01_RS12535;Name=CYJ01_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12535;old_locus_tag=CYJ01_11700 NZ_PJUR01000066.1 Protein Homology CDS 967 1143 . - 0 ID=cds-WP_373408584.1;Parent=gene-CYJ01_RS12535;Dbxref=GenBank:WP_373408584.1;Name=WP_373408584.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=CYJ01_RS12535;product=helix-turn-helix domain-containing protein;protein_id=WP_373408584.1;transl_table=11 NZ_PJUR01000066.1 RefSeq gene 1201 1635 . - . ID=gene-CYJ01_RS11700;Name=CYJ01_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11700;old_locus_tag=CYJ01_11705 NZ_PJUR01000066.1 Protein Homology CDS 1201 1635 . - 0 ID=cds-WP_101457586.1;Parent=gene-CYJ01_RS11700;Dbxref=GenBank:WP_101457586.1;Name=WP_101457586.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ01_RS11700;product=ATP-binding protein;protein_id=WP_101457586.1;transl_table=11 NZ_PJUR01000066.1 RefSeq pseudogene 1656 1787 . + . ID=gene-CYJ01_RS11705;Name=CYJ01_RS11705;end_range=1787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11705;old_locus_tag=CYJ01_11710;partial=true;pseudo=true;start_range=.,1656 NZ_PJUR01000066.1 Protein Homology CDS 1656 1787 . + 0 ID=cds-CYJ01_RS11705;Parent=gene-CYJ01_RS11705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479751.1;locus_tag=CYJ01_RS11705;partial=true;product=transposase;pseudo=true;start_range=.,1656;transl_table=11 NZ_PJUR01000066.1 RefSeq pseudogene 2188 2337 . - . ID=gene-CYJ01_RS12540;Name=CYJ01_RS12540;end_range=2337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12540;partial=true;pseudo=true NZ_PJUR01000066.1 Protein Homology CDS 2188 2337 . - 0 ID=cds-CYJ01_RS12540;Parent=gene-CYJ01_RS12540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=2337,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ01_RS12540;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUR01000066.1 RefSeq gene 2815 3237 . - . ID=gene-CYJ01_RS11715;Name=CYJ01_RS11715;end_range=3237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11715;old_locus_tag=CYJ01_11720;partial=true NZ_PJUR01000066.1 Protein Homology CDS 2815 3237 . - 0 ID=cds-WP_198588002.1;Parent=gene-CYJ01_RS11715;Dbxref=GenBank:WP_198588002.1;Name=WP_198588002.1;end_range=3237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ01_RS11715;partial=true;product=transposase;protein_id=WP_198588002.1;transl_table=11 ##sequence-region NZ_PJUR01000067.1 1 2341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000067.1 RefSeq region 1 2341 . + . ID=NZ_PJUR01000067.1:1..2341;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000067.1 RefSeq gene 145 1323 . - . ID=gene-CYJ01_RS11720;Name=CYJ01_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11720;old_locus_tag=CYJ01_11725 NZ_PJUR01000067.1 Protein Homology CDS 145 1323 . - 0 ID=cds-WP_014613064.1;Parent=gene-CYJ01_RS11720;Dbxref=GenBank:WP_014613064.1;Name=WP_014613064.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613064.1;locus_tag=CYJ01_RS11720;product=nitrate/nitrite transporter;protein_id=WP_014613064.1;transl_table=11 NZ_PJUR01000067.1 RefSeq pseudogene 1573 1731 . - . ID=gene-CYJ01_RS12545;Name=CYJ01_RS12545;end_range=1731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12545;partial=true;pseudo=true NZ_PJUR01000067.1 Protein Homology CDS 1573 1731 . - 0 ID=cds-CYJ01_RS12545;Parent=gene-CYJ01_RS12545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1731,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020567.8;locus_tag=CYJ01_RS12545;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000068.1 1 3446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000068.1 RefSeq region 1 3446 . + . ID=NZ_PJUR01000068.1:1..3446;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000068.1 RefSeq gene 270 728 . - . ID=gene-CYJ01_RS11730;Name=CYJ01_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11730;old_locus_tag=CYJ01_11735 NZ_PJUR01000068.1 Protein Homology CDS 270 728 . - 0 ID=cds-WP_038024174.1;Parent=gene-CYJ01_RS11730;Dbxref=GenBank:WP_038024174.1;Name=WP_038024174.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592130.1;locus_tag=CYJ01_RS11730;product=GNAT family N-acetyltransferase;protein_id=WP_038024174.1;transl_table=11 NZ_PJUR01000068.1 RefSeq gene 773 1522 . - . ID=gene-CYJ01_RS11735;Name=CYJ01_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11735;old_locus_tag=CYJ01_11740 NZ_PJUR01000068.1 Protein Homology CDS 773 1522 . - 0 ID=cds-WP_101457589.1;Parent=gene-CYJ01_RS11735;Dbxref=GenBank:WP_101457589.1;Name=WP_101457589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702010.1;locus_tag=CYJ01_RS11735;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_101457589.1;transl_table=11 NZ_PJUR01000068.1 RefSeq gene 1525 2091 . - . ID=gene-CYJ01_RS11740;Name=CYJ01_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11740;old_locus_tag=CYJ01_11745 NZ_PJUR01000068.1 Protein Homology CDS 1525 2091 . - 0 ID=cds-WP_101457590.1;Parent=gene-CYJ01_RS11740;Dbxref=GenBank:WP_101457590.1;Name=WP_101457590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502671.1;locus_tag=CYJ01_RS11740;product=Pycsar system effector family protein;protein_id=WP_101457590.1;transl_table=11 NZ_PJUR01000068.1 RefSeq pseudogene 2391 3446 . + . ID=gene-CYJ01_RS12550;Name=CYJ01_RS12550;end_range=3446,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12550;old_locus_tag=CYJ01_11750;partial=true;pseudo=true NZ_PJUR01000068.1 Protein Homology CDS 2391 3446 . + 0 ID=cds-CYJ01_RS12550;Parent=gene-CYJ01_RS12550;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3446,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ01_RS12550;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000069.1 1 2072 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000069.1 RefSeq region 1 2072 . + . ID=NZ_PJUR01000069.1:1..2072;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000069.1 RefSeq gene 78 257 . - . ID=gene-CYJ01_RS11750;Name=CYJ01_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11750;old_locus_tag=CYJ01_11755 NZ_PJUR01000069.1 Protein Homology CDS 78 257 . - 0 ID=cds-WP_014614017.1;Parent=gene-CYJ01_RS11750;Dbxref=GenBank:WP_014614017.1;Name=WP_014614017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614017.1;locus_tag=CYJ01_RS11750;product=DUF1381 domain-containing protein;protein_id=WP_014614017.1;transl_table=11 NZ_PJUR01000069.1 RefSeq gene 1061 1609 . + . ID=gene-CYJ01_RS12370;Name=CYJ01_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12370;old_locus_tag=CYJ01_11760 NZ_PJUR01000069.1 Protein Homology CDS 1061 1609 . + 0 ID=cds-WP_240621186.1;Parent=gene-CYJ01_RS12370;Dbxref=GenBank:WP_240621186.1;Name=WP_240621186.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=CYJ01_RS12370;product=tyrosine-type recombinase/integrase;protein_id=WP_240621186.1;transl_table=11 NZ_PJUR01000069.1 RefSeq gene 1738 2072 . - . ID=gene-CYJ01_RS11760;Name=CYJ01_RS11760;end_range=2072,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11760;old_locus_tag=CYJ01_11765;partial=true NZ_PJUR01000069.1 Protein Homology CDS 1738 2072 . - 2 ID=cds-WP_274539894.1;Parent=gene-CYJ01_RS11760;Dbxref=GenBank:WP_274539894.1;Name=WP_274539894.1;end_range=2072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11760;partial=true;product=group II intron maturase-specific domain-containing protein;protein_id=WP_274539894.1;transl_table=11 ##sequence-region NZ_PJUR01000007.1 1 83404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000007.1 RefSeq region 1 83404 . + . ID=NZ_PJUR01000007.1:1..83404;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000007.1 RefSeq gene 113 442 . - . ID=gene-CYJ01_RS03980;Name=CYJ01_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03980;old_locus_tag=CYJ01_03980 NZ_PJUR01000007.1 Protein Homology CDS 113 442 . - 0 ID=cds-WP_019167490.1;Parent=gene-CYJ01_RS03980;Dbxref=GenBank:WP_019167490.1;Name=WP_019167490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612916.1;locus_tag=CYJ01_RS03980;product=antibiotic biosynthesis monooxygenase;protein_id=WP_019167490.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 609 914 . - . ID=gene-CYJ01_RS03985;Name=CYJ01_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03985;old_locus_tag=CYJ01_03985 NZ_PJUR01000007.1 Protein Homology CDS 609 914 . - 0 ID=cds-WP_037542214.1;Parent=gene-CYJ01_RS03985;Dbxref=GenBank:WP_037542214.1;Name=WP_037542214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167489.1;locus_tag=CYJ01_RS03985;product=hypothetical protein;protein_id=WP_037542214.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 1046 2434 . - . ID=gene-CYJ01_RS03990;Name=CYJ01_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03990;old_locus_tag=CYJ01_03990 NZ_PJUR01000007.1 Protein Homology CDS 1046 2434 . - 0 ID=cds-WP_101457274.1;Parent=gene-CYJ01_RS03990;Dbxref=GenBank:WP_101457274.1;Name=WP_101457274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=CYJ01_RS03990;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_101457274.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 2587 2937 . + . ID=gene-CYJ01_RS03995;Name=CYJ01_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS03995;old_locus_tag=CYJ01_03995 NZ_PJUR01000007.1 Protein Homology CDS 2587 2937 . + 0 ID=cds-WP_015729673.1;Parent=gene-CYJ01_RS03995;Dbxref=GenBank:WP_015729673.1;Name=WP_015729673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729673.1;locus_tag=CYJ01_RS03995;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_015729673.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 3004 3363 . - . ID=gene-CYJ01_RS04000;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=CYJ01_RS04000;old_locus_tag=CYJ01_04000 NZ_PJUR01000007.1 Protein Homology CDS 3004 3363 . - 0 ID=cds-WP_014612912.1;Parent=gene-CYJ01_RS04000;Dbxref=GenBank:WP_014612912.1;Name=WP_014612912.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124171.1;locus_tag=CYJ01_RS04000;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_014612912.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 3360 3941 . - . ID=gene-CYJ01_RS04005;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CYJ01_RS04005;old_locus_tag=CYJ01_04005 NZ_PJUR01000007.1 Protein Homology CDS 3360 3941 . - 0 ID=cds-WP_014612911.1;Parent=gene-CYJ01_RS04005;Dbxref=GenBank:WP_014612911.1;Name=WP_014612911.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166492.1;locus_tag=CYJ01_RS04005;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_014612911.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 3964 4926 . - . ID=gene-CYJ01_RS04010;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=CYJ01_RS04010;old_locus_tag=CYJ01_04010 NZ_PJUR01000007.1 Protein Homology CDS 3964 4926 . - 0 ID=cds-WP_101457275.1;Parent=gene-CYJ01_RS04010;Dbxref=GenBank:WP_101457275.1;Name=WP_101457275.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=CYJ01_RS04010;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_101457275.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 5093 5794 . - . ID=gene-CYJ01_RS04015;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04015;old_locus_tag=CYJ01_04015 NZ_PJUR01000007.1 Protein Homology CDS 5093 5794 . - 0 ID=cds-WP_014612909.1;Parent=gene-CYJ01_RS04015;Dbxref=GenBank:WP_014612909.1;Name=WP_014612909.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498828.1;locus_tag=CYJ01_RS04015;product=antiholin-like protein LrgB;protein_id=WP_014612909.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 5787 6221 . - . ID=gene-CYJ01_RS04020;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04020;old_locus_tag=CYJ01_04020 NZ_PJUR01000007.1 Protein Homology CDS 5787 6221 . - 0 ID=cds-WP_014612908.1;Parent=gene-CYJ01_RS04020;Dbxref=GenBank:WP_014612908.1;Name=WP_014612908.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612908.1;locus_tag=CYJ01_RS04020;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_014612908.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 6871 7605 . - . ID=gene-CYJ01_RS04030;Name=CYJ01_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04030;old_locus_tag=CYJ01_04030 NZ_PJUR01000007.1 Protein Homology CDS 6871 7605 . - 0 ID=cds-WP_096533817.1;Parent=gene-CYJ01_RS04030;Dbxref=GenBank:WP_096533817.1;Name=WP_096533817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612907.1;locus_tag=CYJ01_RS04030;product=response regulator transcription factor LytR;protein_id=WP_096533817.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 7609 9360 . - . ID=gene-CYJ01_RS04035;Name=CYJ01_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04035;old_locus_tag=CYJ01_04035 NZ_PJUR01000007.1 Protein Homology CDS 7609 9360 . - 0 ID=cds-WP_014612906.1;Parent=gene-CYJ01_RS04035;Dbxref=GenBank:WP_014612906.1;Name=WP_014612906.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166488.1;locus_tag=CYJ01_RS04035;product=sensor histidine kinase;protein_id=WP_014612906.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 9836 11014 . - . ID=gene-CYJ01_RS04040;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04040;old_locus_tag=CYJ01_04040 NZ_PJUR01000007.1 Protein Homology CDS 9836 11014 . - 0 ID=cds-WP_014612904.1;Parent=gene-CYJ01_RS04040;Dbxref=GenBank:WP_014612904.1;Name=WP_014612904.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=CYJ01_RS04040;product=phosphopentomutase;protein_id=WP_014612904.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 11048 11710 . - . ID=gene-CYJ01_RS04045;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04045;old_locus_tag=CYJ01_04045 NZ_PJUR01000007.1 Protein Homology CDS 11048 11710 . - 0 ID=cds-WP_014612903.1;Parent=gene-CYJ01_RS04045;Dbxref=GenBank:WP_014612903.1;Name=WP_014612903.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=CYJ01_RS04045;product=deoxyribose-phosphate aldolase;protein_id=WP_014612903.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 12041 12850 . + . ID=gene-CYJ01_RS04050;Name=CYJ01_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04050;old_locus_tag=CYJ01_04050 NZ_PJUR01000007.1 Protein Homology CDS 12041 12850 . + 0 ID=cds-WP_037542205.1;Parent=gene-CYJ01_RS04050;Dbxref=GenBank:WP_037542205.1;Name=WP_037542205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=CYJ01_RS04050;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_037542205.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 12866 13480 . + . ID=gene-CYJ01_RS04055;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CYJ01_RS04055;old_locus_tag=CYJ01_04055 NZ_PJUR01000007.1 Protein Homology CDS 12866 13480 . + 0 ID=cds-WP_063284764.1;Parent=gene-CYJ01_RS04055;Dbxref=GenBank:WP_063284764.1;Name=WP_063284764.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=CYJ01_RS04055;product=ATP phosphoribosyltransferase;protein_id=WP_063284764.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 13470 14729 . + . ID=gene-CYJ01_RS04060;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04060;old_locus_tag=CYJ01_04060 NZ_PJUR01000007.1 Protein Homology CDS 13470 14729 . + 0 ID=cds-WP_101457277.1;Parent=gene-CYJ01_RS04060;Dbxref=GenBank:WP_101457277.1;Name=WP_101457277.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=CYJ01_RS04060;product=histidinol dehydrogenase;protein_id=WP_101457277.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 14726 15739 . + . ID=gene-CYJ01_RS04065;Name=CYJ01_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04065;old_locus_tag=CYJ01_04065 NZ_PJUR01000007.1 Protein Homology CDS 14726 15739 . + 0 ID=cds-WP_101457278.1;Parent=gene-CYJ01_RS04065;Dbxref=GenBank:WP_101457278.1;Name=WP_101457278.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=CYJ01_RS04065;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_101457278.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 15723 16304 . + . ID=gene-CYJ01_RS04070;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04070;old_locus_tag=CYJ01_04070 NZ_PJUR01000007.1 Protein Homology CDS 15723 16304 . + 0 ID=cds-WP_101457279.1;Parent=gene-CYJ01_RS04070;Dbxref=GenBank:WP_101457279.1;Name=WP_101457279.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167083.1;locus_tag=CYJ01_RS04070;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_101457279.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 16301 16876 . + . ID=gene-CYJ01_RS04075;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CYJ01_RS04075;old_locus_tag=CYJ01_04075 NZ_PJUR01000007.1 Protein Homology CDS 16301 16876 . + 0 ID=cds-WP_101457280.1;Parent=gene-CYJ01_RS04075;Dbxref=GenBank:WP_101457280.1;Name=WP_101457280.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=CYJ01_RS04075;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_101457280.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 16869 17573 . + . ID=gene-CYJ01_RS04080;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04080;old_locus_tag=CYJ01_04080 NZ_PJUR01000007.1 Protein Homology CDS 16869 17573 . + 0 ID=cds-WP_101457281.1;Parent=gene-CYJ01_RS04080;Dbxref=GenBank:WP_101457281.1;Name=WP_101457281.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=CYJ01_RS04080;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_101457281.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 17570 18334 . + . ID=gene-CYJ01_RS12465;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CYJ01_RS12465;old_locus_tag=CYJ01_04085 NZ_PJUR01000007.1 Protein Homology CDS 17570 18334 . + 0 ID=cds-WP_014612895.1;Parent=gene-CYJ01_RS12465;Dbxref=GenBank:WP_014612895.1;Name=WP_014612895.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168443.1;locus_tag=CYJ01_RS12465;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_014612895.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 18325 18954 . + . ID=gene-CYJ01_RS12470;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CYJ01_RS12470;old_locus_tag=CYJ01_04090 NZ_PJUR01000007.1 Protein Homology CDS 18325 18954 . + 0 ID=cds-WP_101457282.1;Parent=gene-CYJ01_RS12470;Dbxref=GenBank:WP_101457282.1;Name=WP_101457282.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=CYJ01_RS12470;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_101457282.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 19068 20069 . - . ID=gene-CYJ01_RS04095;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ01_RS04095;old_locus_tag=CYJ01_04095 NZ_PJUR01000007.1 Protein Homology CDS 19068 20069 . - 0 ID=cds-WP_198587995.1;Parent=gene-CYJ01_RS04095;Dbxref=GenBank:WP_198587995.1;Name=WP_198587995.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508858.1;locus_tag=CYJ01_RS04095;product=ornithine carbamoyltransferase;protein_id=WP_198587995.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 20419 22113 . - . ID=gene-CYJ01_RS04100;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04100;old_locus_tag=CYJ01_04100 NZ_PJUR01000007.1 Protein Homology CDS 20419 22113 . - 0 ID=cds-WP_014612892.1;Parent=gene-CYJ01_RS04100;Dbxref=GenBank:WP_014612892.1;Name=WP_014612892.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=CYJ01_RS04100;product=choline dehydrogenase;protein_id=WP_014612892.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 22241 23734 . - . ID=gene-CYJ01_RS04105;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04105;old_locus_tag=CYJ01_04105 NZ_PJUR01000007.1 Protein Homology CDS 22241 23734 . - 0 ID=cds-WP_014612891.1;Parent=gene-CYJ01_RS04105;Dbxref=GenBank:WP_014612891.1;Name=WP_014612891.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167076.1;locus_tag=CYJ01_RS04105;product=betaine-aldehyde dehydrogenase;protein_id=WP_014612891.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 23956 24507 . + . ID=gene-CYJ01_RS04110;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=CYJ01_RS04110;old_locus_tag=CYJ01_04110 NZ_PJUR01000007.1 Protein Homology CDS 23956 24507 . + 0 ID=cds-WP_014612890.1;Parent=gene-CYJ01_RS04110;Dbxref=GenBank:WP_014612890.1;Name=WP_014612890.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168438.1;locus_tag=CYJ01_RS04110;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_014612890.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 26215 27819 . - . ID=gene-CYJ01_RS04115;Name=CYJ01_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04115;old_locus_tag=CYJ01_04115 NZ_PJUR01000007.1 Protein Homology CDS 26215 27819 . - 0 ID=cds-WP_233509222.1;Parent=gene-CYJ01_RS04115;Dbxref=GenBank:WP_233509222.1;Name=WP_233509222.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384111.1;locus_tag=CYJ01_RS04115;product=BCCT family transporter;protein_id=WP_233509222.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 28232 29554 . - . ID=gene-CYJ01_RS04120;Name=CYJ01_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04120;old_locus_tag=CYJ01_04120 NZ_PJUR01000007.1 Protein Homology CDS 28232 29554 . - 0 ID=cds-WP_065353983.1;Parent=gene-CYJ01_RS04120;Dbxref=GenBank:WP_065353983.1;Name=WP_065353983.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167072.1;locus_tag=CYJ01_RS04120;product=Nramp family divalent metal transporter;protein_id=WP_065353983.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 29716 32580 . - . ID=gene-CYJ01_RS04125;Name=CYJ01_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04125;old_locus_tag=CYJ01_04125 NZ_PJUR01000007.1 Protein Homology CDS 29716 32580 . - 0 ID=cds-WP_101457285.1;Parent=gene-CYJ01_RS04125;Dbxref=GenBank:WP_101457285.1;Name=WP_101457285.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=CYJ01_RS04125;product=DEAD/DEAH box helicase;protein_id=WP_101457285.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 32585 32977 . - . ID=gene-CYJ01_RS04130;Name=CYJ01_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04130;old_locus_tag=CYJ01_04130 NZ_PJUR01000007.1 Protein Homology CDS 32585 32977 . - 0 ID=cds-WP_014612885.1;Parent=gene-CYJ01_RS04130;Dbxref=GenBank:WP_014612885.1;Name=WP_014612885.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612885.1;locus_tag=CYJ01_RS04130;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_014612885.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 33129 34550 . - . ID=gene-CYJ01_RS04135;Name=CYJ01_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04135;old_locus_tag=CYJ01_04135 NZ_PJUR01000007.1 Protein Homology CDS 33129 34550 . - 0 ID=cds-WP_101457286.1;Parent=gene-CYJ01_RS04135;Dbxref=GenBank:WP_101457286.1;Name=WP_101457286.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612884.1;locus_tag=CYJ01_RS04135;product=alkaline phosphatase;protein_id=WP_101457286.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 34998 35633 . + . ID=gene-CYJ01_RS04140;Name=CYJ01_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04140;old_locus_tag=CYJ01_04140 NZ_PJUR01000007.1 Protein Homology CDS 34998 35633 . + 0 ID=cds-WP_014612883.1;Parent=gene-CYJ01_RS04140;Dbxref=GenBank:WP_014612883.1;Name=WP_014612883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729699.1;locus_tag=CYJ01_RS04140;product=hypothetical protein;protein_id=WP_014612883.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 35787 36374 . - . ID=gene-CYJ01_RS04145;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04145;old_locus_tag=CYJ01_04145 NZ_PJUR01000007.1 Protein Homology CDS 35787 36374 . - 0 ID=cds-WP_101457287.1;Parent=gene-CYJ01_RS04145;Dbxref=GenBank:WP_101457287.1;Name=WP_101457287.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612882.1;locus_tag=CYJ01_RS04145;product=signal peptidase I;protein_id=WP_101457287.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 36483 37031 . - . ID=gene-CYJ01_RS04150;Name=CYJ01_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04150;old_locus_tag=CYJ01_04150 NZ_PJUR01000007.1 Protein Homology CDS 36483 37031 . - 0 ID=cds-WP_015729701.1;Parent=gene-CYJ01_RS04150;Dbxref=GenBank:WP_015729701.1;Name=WP_015729701.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168425.1;locus_tag=CYJ01_RS04150;product=helix-turn-helix domain-containing protein;protein_id=WP_015729701.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 37140 38318 . + . ID=gene-CYJ01_RS04155;Name=CYJ01_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04155;old_locus_tag=CYJ01_04155 NZ_PJUR01000007.1 Protein Homology CDS 37140 38318 . + 0 ID=cds-WP_101457288.1;Parent=gene-CYJ01_RS04155;Dbxref=GenBank:WP_101457288.1;Name=WP_101457288.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612880.1;locus_tag=CYJ01_RS04155;product=CynX/NimT family MFS transporter;protein_id=WP_101457288.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 38472 39482 . - . ID=gene-CYJ01_RS04160;Name=CYJ01_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04160;old_locus_tag=CYJ01_04160 NZ_PJUR01000007.1 Protein Homology CDS 38472 39482 . - 0 ID=cds-WP_101457289.1;Parent=gene-CYJ01_RS04160;Dbxref=GenBank:WP_101457289.1;Name=WP_101457289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729703.1;locus_tag=CYJ01_RS04160;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_101457289.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 39696 41432 . - . ID=gene-CYJ01_RS04165;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04165;old_locus_tag=CYJ01_04165 NZ_PJUR01000007.1 Protein Homology CDS 39696 41432 . - 0 ID=cds-WP_101457290.1;Parent=gene-CYJ01_RS04165;Dbxref=GenBank:WP_101457290.1;Name=WP_101457290.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=CYJ01_RS04165;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_101457290.1;transl_table=11 NZ_PJUR01000007.1 cmsearch riboswitch 41629 41732 . - . ID=id-NZ_PJUR01000007.1:41629..41732;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000007.1 RefSeq gene 42200 43690 . - . ID=gene-CYJ01_RS04170;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ01_RS04170;old_locus_tag=CYJ01_04170 NZ_PJUR01000007.1 Protein Homology CDS 42200 43690 . - 0 ID=cds-WP_014612876.1;Parent=gene-CYJ01_RS04170;Dbxref=GenBank:WP_014612876.1;Name=WP_014612876.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=CYJ01_RS04170;product=cardiolipin synthase;protein_id=WP_014612876.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 43836 44678 . + . ID=gene-CYJ01_RS04175;Name=CYJ01_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04175;old_locus_tag=CYJ01_04175 NZ_PJUR01000007.1 Protein Homology CDS 43836 44678 . + 0 ID=cds-WP_101457291.1;Parent=gene-CYJ01_RS04175;Dbxref=GenBank:WP_101457291.1;Name=WP_101457291.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612875.1;locus_tag=CYJ01_RS04175;product=alpha/beta hydrolase;protein_id=WP_101457291.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 44874 45821 . + . ID=gene-CYJ01_RS04180;Name=CYJ01_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04180;old_locus_tag=CYJ01_04180 NZ_PJUR01000007.1 Protein Homology CDS 44874 45821 . + 0 ID=cds-WP_101457292.1;Parent=gene-CYJ01_RS04180;Dbxref=GenBank:WP_101457292.1;Name=WP_101457292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612874.1;locus_tag=CYJ01_RS04180;product=nucleoside hydrolase;protein_id=WP_101457292.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 45935 48931 . - . ID=gene-CYJ01_RS04185;Name=CYJ01_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04185;old_locus_tag=CYJ01_04185 NZ_PJUR01000007.1 Protein Homology CDS 45935 48931 . - 0 ID=cds-WP_101457293.1;Parent=gene-CYJ01_RS04185;Dbxref=GenBank:WP_101457293.1;Name=WP_101457293.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612873.1;locus_tag=CYJ01_RS04185;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=WP_101457293.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 48959 50338 . - . ID=gene-CYJ01_RS04190;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04190;old_locus_tag=CYJ01_04190 NZ_PJUR01000007.1 Protein Homology CDS 48959 50338 . - 0 ID=cds-WP_014612872.1;Parent=gene-CYJ01_RS04190;Dbxref=GenBank:WP_014612872.1;Name=WP_014612872.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612872.1;locus_tag=CYJ01_RS04190;product=melibiose:sodium transporter MelB;protein_id=WP_014612872.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 50857 52047 . + . ID=gene-CYJ01_RS04195;Name=CYJ01_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04195;old_locus_tag=CYJ01_04195 NZ_PJUR01000007.1 Protein Homology CDS 50857 52047 . + 0 ID=cds-WP_101457294.1;Parent=gene-CYJ01_RS04195;Dbxref=GenBank:WP_101457294.1;Name=WP_101457294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167057.1;locus_tag=CYJ01_RS04195;product=YbfB/YjiJ family MFS transporter;protein_id=WP_101457294.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 52203 53510 . - . ID=gene-CYJ01_RS04200;Name=CYJ01_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04200;old_locus_tag=CYJ01_04200 NZ_PJUR01000007.1 Protein Homology CDS 52203 53510 . - 0 ID=cds-WP_101457295.1;Parent=gene-CYJ01_RS04200;Dbxref=GenBank:WP_101457295.1;Name=WP_101457295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168641.1;locus_tag=CYJ01_RS04200;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_101457295.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 53700 54563 . - . ID=gene-CYJ01_RS04205;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CYJ01_RS04205;old_locus_tag=CYJ01_04205 NZ_PJUR01000007.1 Protein Homology CDS 53700 54563 . - 0 ID=cds-WP_014612869.1;Parent=gene-CYJ01_RS04205;Dbxref=GenBank:WP_014612869.1;Name=WP_014612869.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729709.1;locus_tag=CYJ01_RS04205;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_014612869.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 54942 55895 . + . ID=gene-CYJ01_RS04210;Name=CYJ01_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04210;old_locus_tag=CYJ01_04210 NZ_PJUR01000007.1 Protein Homology CDS 54942 55895 . + 0 ID=cds-WP_101457296.1;Parent=gene-CYJ01_RS04210;Dbxref=GenBank:WP_101457296.1;Name=WP_101457296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837111.1;locus_tag=CYJ01_RS04210;product=extracellular solute-binding protein;protein_id=WP_101457296.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 55892 57445 . + . ID=gene-CYJ01_RS04215;Name=CYJ01_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04215;old_locus_tag=CYJ01_04215 NZ_PJUR01000007.1 Protein Homology CDS 55892 57445 . + 0 ID=cds-WP_020219424.1;Parent=gene-CYJ01_RS04215;Dbxref=GenBank:WP_020219424.1;Name=WP_020219424.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612867.1;locus_tag=CYJ01_RS04215;product=sensor histidine kinase;protein_id=WP_020219424.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 57438 58181 . + . ID=gene-CYJ01_RS04220;Name=CYJ01_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04220;old_locus_tag=CYJ01_04220 NZ_PJUR01000007.1 Protein Homology CDS 57438 58181 . + 0 ID=cds-WP_101457297.1;Parent=gene-CYJ01_RS04220;Dbxref=GenBank:WP_101457297.1;Name=WP_101457297.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612866.1;locus_tag=CYJ01_RS04220;product=response regulator transcription factor;protein_id=WP_101457297.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 58384 59763 . - . ID=gene-CYJ01_RS04225;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CYJ01_RS04225;old_locus_tag=CYJ01_04225 NZ_PJUR01000007.1 Protein Homology CDS 58384 59763 . - 0 ID=cds-WP_014612865.1;Parent=gene-CYJ01_RS04225;Dbxref=GenBank:WP_014612865.1;Name=WP_014612865.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=CYJ01_RS04225;product=hexose-6-phosphate:phosphate antiporter UhpT;protein_id=WP_014612865.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 60033 60968 . + . ID=gene-CYJ01_RS04230;Name=CYJ01_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04230;old_locus_tag=CYJ01_04230 NZ_PJUR01000007.1 Protein Homology CDS 60033 60968 . + 0 ID=cds-WP_014612864.1;Parent=gene-CYJ01_RS04230;Dbxref=GenBank:WP_014612864.1;Name=WP_014612864.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=CYJ01_RS04230;product=ketopantoate reductase family protein;protein_id=WP_014612864.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 61459 62145 . + . ID=gene-CYJ01_RS04235;Name=CYJ01_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04235;old_locus_tag=CYJ01_04235 NZ_PJUR01000007.1 Protein Homology CDS 61459 62145 . + 0 ID=cds-WP_014612863.1;Parent=gene-CYJ01_RS04235;Dbxref=GenBank:WP_014612863.1;Name=WP_014612863.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169009.1;locus_tag=CYJ01_RS04235;product=acetolactate decarboxylase;protein_id=WP_014612863.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 62552 63442 . + . ID=gene-CYJ01_RS04240;Name=CYJ01_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04240;old_locus_tag=CYJ01_04240 NZ_PJUR01000007.1 Protein Homology CDS 62552 63442 . + 0 ID=cds-WP_101457298.1;Parent=gene-CYJ01_RS04240;Dbxref=GenBank:WP_101457298.1;Name=WP_101457298.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729712.1;locus_tag=CYJ01_RS04240;product=fructose bisphosphate aldolase;protein_id=WP_101457298.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 63917 65572 . - . ID=gene-CYJ01_RS04245;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04245;old_locus_tag=CYJ01_04245 NZ_PJUR01000007.1 Protein Homology CDS 63917 65572 . - 0 ID=cds-WP_100006598.1;Parent=gene-CYJ01_RS04245;Dbxref=GenBank:WP_100006598.1;Name=WP_100006598.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729713.1;locus_tag=CYJ01_RS04245;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=WP_100006598.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 65848 66540 . - . ID=gene-CYJ01_RS04250;Name=CYJ01_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04250;old_locus_tag=CYJ01_04250 NZ_PJUR01000007.1 Protein Homology CDS 65848 66540 . - 0 ID=cds-WP_104052138.1;Parent=gene-CYJ01_RS04250;Dbxref=GenBank:WP_104052138.1;Name=WP_104052138.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=CYJ01_RS04250;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_104052138.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 66905 67294 . - . ID=gene-CYJ01_RS04255;Name=CYJ01_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04255;old_locus_tag=CYJ01_04255 NZ_PJUR01000007.1 Protein Homology CDS 66905 67294 . - 0 ID=cds-WP_020219423.1;Parent=gene-CYJ01_RS04255;Dbxref=GenBank:WP_020219423.1;Name=WP_020219423.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219423.1;locus_tag=CYJ01_RS04255;product=tautomerase family protein;protein_id=WP_020219423.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 67410 68906 . - . ID=gene-CYJ01_RS04260;Name=CYJ01_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04260;old_locus_tag=CYJ01_04260 NZ_PJUR01000007.1 Protein Homology CDS 67410 68906 . - 0 ID=cds-WP_101457299.1;Parent=gene-CYJ01_RS04260;Dbxref=GenBank:WP_101457299.1;Name=WP_101457299.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729716.1;locus_tag=CYJ01_RS04260;product=sodium:solute symporter family protein;protein_id=WP_101457299.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 68917 70296 . - . ID=gene-CYJ01_RS04265;Name=CYJ01_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04265;old_locus_tag=CYJ01_04265 NZ_PJUR01000007.1 Protein Homology CDS 68917 70296 . - 0 ID=cds-WP_014612856.1;Parent=gene-CYJ01_RS04265;Dbxref=GenBank:WP_014612856.1;Name=WP_014612856.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729717.1;locus_tag=CYJ01_RS04265;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014612856.1;transl_table=11 NZ_PJUR01000007.1 cmsearch riboswitch 70342 70442 . - . ID=id-NZ_PJUR01000007.1:70342..70442;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000007.1 RefSeq gene 70599 71876 . - . ID=gene-CYJ01_RS04270;Name=CYJ01_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04270;old_locus_tag=CYJ01_04270 NZ_PJUR01000007.1 Protein Homology CDS 70599 71876 . - 0 ID=cds-WP_101457300.1;Parent=gene-CYJ01_RS04270;Dbxref=GenBank:WP_101457300.1;Name=WP_101457300.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=CYJ01_RS04270;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_101457300.1;transl_table=11 NZ_PJUR01000007.1 cmsearch riboswitch 71940 72038 . - . ID=id-NZ_PJUR01000007.1:71940..72038;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000007.1 RefSeq gene 72237 72776 . - . ID=gene-CYJ01_RS04275;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CYJ01_RS04275;old_locus_tag=CYJ01_04275 NZ_PJUR01000007.1 Protein Homology CDS 72237 72776 . - 0 ID=cds-WP_101457301.1;Parent=gene-CYJ01_RS04275;Dbxref=GenBank:WP_101457301.1;Name=WP_101457301.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612853.1;locus_tag=CYJ01_RS04275;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_101457301.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 72773 74623 . - . ID=gene-CYJ01_RS04280;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04280;old_locus_tag=CYJ01_04280 NZ_PJUR01000007.1 Protein Homology CDS 72773 74623 . - 0 ID=cds-WP_014612852.1;Parent=gene-CYJ01_RS04280;Dbxref=GenBank:WP_014612852.1;Name=WP_014612852.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=CYJ01_RS04280;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_014612852.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 75437 75550 . + . ID=gene-CYJ01_RS11940;Name=CYJ01_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11940 NZ_PJUR01000007.1 Protein Homology CDS 75437 75550 . + 0 ID=cds-WP_110144662.1;Parent=gene-CYJ01_RS11940;Dbxref=GenBank:WP_110144662.1;Name=WP_110144662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033608.1;locus_tag=CYJ01_RS11940;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_110144662.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 75678 77039 . - . ID=gene-CYJ01_RS04285;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ01_RS04285;old_locus_tag=CYJ01_04285 NZ_PJUR01000007.1 Protein Homology CDS 75678 77039 . - 0 ID=cds-WP_014612850.1;Parent=gene-CYJ01_RS04285;Dbxref=GenBank:WP_014612850.1;Name=WP_014612850.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219422.1;locus_tag=CYJ01_RS04285;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014612850.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 77058 77342 . - . ID=gene-CYJ01_RS04290;Name=CYJ01_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04290;old_locus_tag=CYJ01_04290 NZ_PJUR01000007.1 Protein Homology CDS 77058 77342 . - 0 ID=cds-WP_014612849.1;Parent=gene-CYJ01_RS04290;Dbxref=GenBank:WP_014612849.1;Name=WP_014612849.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=CYJ01_RS04290;product=PTS sugar transporter subunit IIB;protein_id=WP_014612849.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 77339 77788 . - . ID=gene-CYJ01_RS04295;Name=CYJ01_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04295;old_locus_tag=CYJ01_04295 NZ_PJUR01000007.1 Protein Homology CDS 77339 77788 . - 0 ID=cds-WP_014612848.1;Parent=gene-CYJ01_RS04295;Dbxref=GenBank:WP_014612848.1;Name=WP_014612848.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612848.1;locus_tag=CYJ01_RS04295;product=PTS sugar transporter subunit IIA;protein_id=WP_014612848.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 77801 79735 . - . ID=gene-CYJ01_RS04300;Name=CYJ01_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04300;old_locus_tag=CYJ01_04300 NZ_PJUR01000007.1 Protein Homology CDS 77801 79735 . - 0 ID=cds-WP_015729721.1;Parent=gene-CYJ01_RS04300;Dbxref=GenBank:WP_015729721.1;Name=WP_015729721.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729721.1;locus_tag=CYJ01_RS04300;product=BglG family transcription antiterminator;protein_id=WP_015729721.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 80239 81273 . - . ID=gene-CYJ01_RS04305;Name=CYJ01_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04305;old_locus_tag=CYJ01_04305 NZ_PJUR01000007.1 Protein Homology CDS 80239 81273 . - 0 ID=cds-WP_014612846.1;Parent=gene-CYJ01_RS04305;Dbxref=GenBank:WP_014612846.1;Name=WP_014612846.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612846.1;locus_tag=CYJ01_RS04305;product=sensor histidine kinase;protein_id=WP_014612846.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 81274 81960 . - . ID=gene-CYJ01_RS04310;Name=CYJ01_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04310;old_locus_tag=CYJ01_04310 NZ_PJUR01000007.1 Protein Homology CDS 81274 81960 . - 0 ID=cds-WP_101457302.1;Parent=gene-CYJ01_RS04310;Dbxref=GenBank:WP_101457302.1;Name=WP_101457302.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729722.1;locus_tag=CYJ01_RS04310;product=response regulator transcription factor;protein_id=WP_101457302.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 81938 82396 . - . ID=gene-CYJ01_RS04315;Name=CYJ01_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04315;old_locus_tag=CYJ01_04315 NZ_PJUR01000007.1 Protein Homology CDS 81938 82396 . - 0 ID=cds-WP_014612844.1;Parent=gene-CYJ01_RS04315;Dbxref=GenBank:WP_014612844.1;Name=WP_014612844.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612844.1;locus_tag=CYJ01_RS04315;product=DoxX family protein;protein_id=WP_014612844.1;transl_table=11 NZ_PJUR01000007.1 RefSeq gene 82436 82888 . - . ID=gene-CYJ01_RS04320;Name=CYJ01_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04320;old_locus_tag=CYJ01_04320 NZ_PJUR01000007.1 Protein Homology CDS 82436 82888 . - 0 ID=cds-WP_014612843.1;Parent=gene-CYJ01_RS04320;Dbxref=GenBank:WP_014612843.1;Name=WP_014612843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093553.1;locus_tag=CYJ01_RS04320;product=DM13 domain-containing protein;protein_id=WP_014612843.1;transl_table=11 ##sequence-region NZ_PJUR01000070.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000070.1 RefSeq region 1 741 . + . ID=NZ_PJUR01000070.1:1..741;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000070.1 RefSeq pseudogene 1 741 . + . ID=gene-CYJ01_RS11765;Name=ltrA;end_range=741,.;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=CYJ01_RS11765;old_locus_tag=CYJ01_11770;partial=true;pseudo=true NZ_PJUR01000070.1 Protein Homology CDS 1 741 . + 0 ID=cds-CYJ01_RS11765;Parent=gene-CYJ01_RS11765;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0000373,GO:0003964;end_range=741,.;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11765;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000071.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000071.1 RefSeq region 1 617 . + . ID=NZ_PJUR01000071.1:1..617;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000071.1 RefSeq gene 1 617 . - . ID=gene-CYJ01_RS11770;Name=CYJ01_RS11770;end_range=617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11770;old_locus_tag=CYJ01_11775;partial=true;start_range=.,1 NZ_PJUR01000071.1 Protein Homology CDS 1 617 . - 2 ID=cds-WP_341458035.1;Parent=gene-CYJ01_RS11770;Dbxref=GenBank:WP_341458035.1;Name=WP_341458035.1;end_range=617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11770;partial=true;product=group II intron maturase-specific domain-containing protein;protein_id=WP_341458035.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000072.1 1 643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000072.1 RefSeq region 1 643 . + . ID=NZ_PJUR01000072.1:1..643;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000072.1 RefSeq gene 506 643 . + . ID=gene-CYJ01_RS12170;Name=CYJ01_RS12170;end_range=643,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS12170;partial=true NZ_PJUR01000072.1 cmsearch rRNA 506 643 . + . ID=rna-CYJ01_RS12170;Parent=gene-CYJ01_RS12170;Dbxref=RFAM:RF02541;end_range=643,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS12170;partial=true;product=23S ribosomal RNA NZ_PJUR01000072.1 cmsearch exon 506 643 . + . ID=exon-CYJ01_RS12170-1;Parent=rna-CYJ01_RS12170;Dbxref=RFAM:RF02541;end_range=643,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS12170;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PJUR01000073.1 1 3068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000073.1 RefSeq region 1 3068 . + . ID=NZ_PJUR01000073.1:1..3068;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000073.1 RefSeq gene 1 851 . - . ID=gene-CYJ01_RS11775;Name=CYJ01_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11775;old_locus_tag=CYJ01_11785;partial=true;start_range=.,1 NZ_PJUR01000073.1 Protein Homology CDS 1 851 . - 0 ID=cds-WP_101457592.1;Parent=gene-CYJ01_RS11775;Dbxref=GenBank:WP_101457592.1;Name=WP_101457592.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=CYJ01_RS11775;partial=true;product=MFS transporter;protein_id=WP_101457592.1;start_range=.,1;transl_table=11 NZ_PJUR01000073.1 RefSeq pseudogene 848 1234 . - . ID=gene-CYJ01_RS11780;Name=CYJ01_RS11780;end_range=1234,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11780;old_locus_tag=CYJ01_11790;partial=true;pseudo=true NZ_PJUR01000073.1 Protein Homology CDS 848 1234 . - 0 ID=cds-CYJ01_RS11780;Parent=gene-CYJ01_RS11780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1234,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012936.7;locus_tag=CYJ01_RS11780;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUR01000073.1 RefSeq pseudogene 2151 2303 . + . ID=gene-CYJ01_RS11785;Name=CYJ01_RS11785;end_range=2303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11785;old_locus_tag=CYJ01_11795;partial=true;pseudo=true NZ_PJUR01000073.1 Protein Homology CDS 2151 2303 . + 0 ID=cds-CYJ01_RS11785;Parent=gene-CYJ01_RS11785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ01_RS11785;partial=true;product=2-dehydropantoate 2-reductase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_PJUR01000073.1 RefSeq pseudogene 2717 3068 . - . ID=gene-CYJ01_RS11795;Name=CYJ01_RS11795;end_range=3068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11795;old_locus_tag=CYJ01_11805;partial=true;pseudo=true NZ_PJUR01000073.1 Protein Homology CDS 2717 3068 . - 1 ID=cds-CYJ01_RS11795;Parent=gene-CYJ01_RS11795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=CYJ01_RS11795;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000074.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000074.1 RefSeq region 1 735 . + . ID=NZ_PJUR01000074.1:1..735;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000074.1 RefSeq pseudogene 1 735 . + . ID=gene-CYJ01_RS12380;Name=CYJ01_RS12380;end_range=735,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12380;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000074.1 Protein Homology CDS 1 735 . + 2 ID=cds-CYJ01_RS12380;Parent=gene-CYJ01_RS12380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS12380;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000075.1 1 2914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000075.1 RefSeq region 1 2914 . + . ID=NZ_PJUR01000075.1:1..2914;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000075.1 RefSeq gene 118 870 . + . ID=gene-CYJ01_RS11810;Name=CYJ01_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11810;old_locus_tag=CYJ01_11820 NZ_PJUR01000075.1 Protein Homology CDS 118 870 . + 0 ID=cds-WP_101457594.1;Parent=gene-CYJ01_RS11810;Dbxref=GenBank:WP_101457594.1;Name=WP_101457594.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800379.1;locus_tag=CYJ01_RS11810;product=S8 family peptidase;protein_id=WP_101457594.1;transl_table=11 NZ_PJUR01000075.1 RefSeq gene 867 1676 . + . ID=gene-CYJ01_RS11815;Name=CYJ01_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11815;old_locus_tag=CYJ01_11825 NZ_PJUR01000075.1 Protein Homology CDS 867 1676 . + 0 ID=cds-WP_101457595.1;Parent=gene-CYJ01_RS11815;Dbxref=GenBank:WP_101457595.1;Name=WP_101457595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_198462579.1;locus_tag=CYJ01_RS11815;product=SAR2788 family putative toxin;protein_id=WP_101457595.1;transl_table=11 NZ_PJUR01000075.1 RefSeq gene 1677 2102 . + . ID=gene-CYJ01_RS11820;Name=CYJ01_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11820;old_locus_tag=CYJ01_11830 NZ_PJUR01000075.1 Protein Homology CDS 1677 2102 . + 0 ID=cds-WP_101457596.1;Parent=gene-CYJ01_RS11820;Dbxref=GenBank:WP_101457596.1;Name=WP_101457596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424552.1;locus_tag=CYJ01_RS11820;product=hypothetical protein;protein_id=WP_101457596.1;transl_table=11 NZ_PJUR01000075.1 RefSeq pseudogene 2329 2775 . - . ID=gene-CYJ01_RS11825;Name=CYJ01_RS11825;end_range=2775,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11825;old_locus_tag=CYJ01_11835;partial=true;pseudo=true NZ_PJUR01000075.1 Protein Homology CDS 2329 2775 . - 0 ID=cds-CYJ01_RS11825;Parent=gene-CYJ01_RS11825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=2775,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454296.1;locus_tag=CYJ01_RS11825;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000076.1 1 391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000076.1 RefSeq region 1 391 . + . ID=NZ_PJUR01000076.1:1..391;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000076.1 RefSeq gene 1 391 . + . ID=gene-CYJ01_RS11830;Name=CYJ01_RS11830;end_range=391,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11830;old_locus_tag=CYJ01_11840;partial=true;start_range=.,1 NZ_PJUR01000076.1 Protein Homology CDS 1 391 . + 1 ID=cds-WP_241900550.1;Parent=gene-CYJ01_RS11830;Dbxref=GenBank:WP_241900550.1;Name=WP_241900550.1;end_range=391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11830;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241900550.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000077.1 1 878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000077.1 RefSeq region 1 878 . + . ID=NZ_PJUR01000077.1:1..878;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000077.1 RefSeq pseudogene 1 878 . - . ID=gene-CYJ01_RS12385;Name=CYJ01_RS12385;end_range=878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12385;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000077.1 Protein Homology CDS 1 878 . - 0 ID=cds-CYJ01_RS12385;Parent=gene-CYJ01_RS12385;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS12385;partial=true;product=accessory Sec-dependent LPXTG-anchored adhesin;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000078.1 1 843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000078.1 RefSeq region 1 843 . + . ID=NZ_PJUR01000078.1:1..843;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000078.1 RefSeq gene 1 843 . + . ID=gene-CYJ01_RS11845;Name=CYJ01_RS11845;end_range=843,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11845;old_locus_tag=CYJ01_11855;partial=true;start_range=.,1 NZ_PJUR01000078.1 Protein Homology CDS 1 843 . + 1 ID=cds-WP_198588003.1;Parent=gene-CYJ01_RS11845;Dbxref=GenBank:WP_198588003.1;Name=WP_198588003.1;end_range=843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ01_RS11845;partial=true;product=SdrD B-like domain-containing protein;protein_id=WP_198588003.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000008.1 1 106236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000008.1 RefSeq region 1 106236 . + . ID=NZ_PJUR01000008.1:1..106236;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000008.1 RefSeq gene 615 2198 . - . ID=gene-CYJ01_RS04330;Name=CYJ01_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04330;old_locus_tag=CYJ01_04330 NZ_PJUR01000008.1 Protein Homology CDS 615 2198 . - 0 ID=cds-WP_101457303.1;Parent=gene-CYJ01_RS04330;Dbxref=GenBank:WP_101457303.1;Name=WP_101457303.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613401.1;locus_tag=CYJ01_RS04330;product=MutS-related protein;protein_id=WP_101457303.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 2561 4513 . - . ID=gene-CYJ01_RS04335;Name=CYJ01_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04335;old_locus_tag=CYJ01_04335 NZ_PJUR01000008.1 Protein Homology CDS 2561 4513 . - 0 ID=cds-WP_101457304.1;Parent=gene-CYJ01_RS04335;Dbxref=GenBank:WP_101457304.1;Name=WP_101457304.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729418.1;locus_tag=CYJ01_RS04335;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_101457304.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 4667 5314 . + . ID=gene-CYJ01_RS04340;Name=CYJ01_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04340;old_locus_tag=CYJ01_04340 NZ_PJUR01000008.1 Protein Homology CDS 4667 5314 . + 0 ID=cds-WP_101457305.1;Parent=gene-CYJ01_RS04340;Dbxref=GenBank:WP_101457305.1;Name=WP_101457305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613403.1;locus_tag=CYJ01_RS04340;product=redox-sensing transcriptional repressor Rex;protein_id=WP_101457305.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 5434 5658 . - . ID=gene-CYJ01_RS04345;Name=CYJ01_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04345;old_locus_tag=CYJ01_04345 NZ_PJUR01000008.1 Protein Homology CDS 5434 5658 . - 0 ID=cds-WP_101457306.1;Parent=gene-CYJ01_RS04345;Dbxref=GenBank:WP_101457306.1;Name=WP_101457306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=CYJ01_RS04345;product=sulfurtransferase TusA family protein;protein_id=WP_101457306.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 5683 6768 . - . ID=gene-CYJ01_RS04350;Name=CYJ01_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04350;old_locus_tag=CYJ01_04350 NZ_PJUR01000008.1 Protein Homology CDS 5683 6768 . - 0 ID=cds-WP_101457307.1;Parent=gene-CYJ01_RS04350;Dbxref=GenBank:WP_101457307.1;Name=WP_101457307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167552.1;locus_tag=CYJ01_RS04350;product=YeeE/YedE family protein;protein_id=WP_101457307.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 7000 7947 . + . ID=gene-CYJ01_RS04355;Name=CYJ01_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04355;old_locus_tag=CYJ01_04355 NZ_PJUR01000008.1 Protein Homology CDS 7000 7947 . + 0 ID=cds-WP_099997326.1;Parent=gene-CYJ01_RS04355;Dbxref=GenBank:WP_099997326.1;Name=WP_099997326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613408.1;locus_tag=CYJ01_RS04355;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_099997326.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 8003 9487 . + . ID=gene-CYJ01_RS04360;Name=CYJ01_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04360;old_locus_tag=CYJ01_04360 NZ_PJUR01000008.1 Protein Homology CDS 8003 9487 . + 0 ID=cds-WP_101457308.1;Parent=gene-CYJ01_RS04360;Dbxref=GenBank:WP_101457308.1;Name=WP_101457308.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613409.1;locus_tag=CYJ01_RS04360;product=sucrose-6-phosphate hydrolase;protein_id=WP_101457308.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 9491 10435 . + . ID=gene-CYJ01_RS04365;Name=CYJ01_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04365;old_locus_tag=CYJ01_04365 NZ_PJUR01000008.1 Protein Homology CDS 9491 10435 . + 0 ID=cds-WP_063278587.1;Parent=gene-CYJ01_RS04365;Dbxref=GenBank:WP_063278587.1;Name=WP_063278587.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166402.1;locus_tag=CYJ01_RS04365;product=carbohydrate kinase family protein;protein_id=WP_063278587.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 10495 11211 . - . ID=gene-CYJ01_RS04370;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04370;old_locus_tag=CYJ01_04370 NZ_PJUR01000008.1 Protein Homology CDS 10495 11211 . - 0 ID=cds-WP_037542586.1;Parent=gene-CYJ01_RS04370;Dbxref=GenBank:WP_037542586.1;Name=WP_037542586.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CYJ01_RS04370;product=quorum-sensing response regulator AgrA;protein_id=WP_037542586.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 11225 12517 . - . ID=gene-CYJ01_RS04375;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04375;old_locus_tag=CYJ01_04375 NZ_PJUR01000008.1 Protein Homology CDS 11225 12517 . - 0 ID=cds-WP_037542588.1;Parent=gene-CYJ01_RS04375;Dbxref=GenBank:WP_037542588.1;Name=WP_037542588.1;gbkey=CDS;gene=agrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729415.1;locus_tag=CYJ01_RS04375;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_037542588.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 12541 12678 . - . ID=gene-CYJ01_RS04380;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04380;old_locus_tag=CYJ01_04380 NZ_PJUR01000008.1 Protein Homology CDS 12541 12678 . - 0 ID=cds-WP_014613413.1;Parent=gene-CYJ01_RS04380;Dbxref=GenBank:WP_014613413.1;Name=WP_014613413.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=CYJ01_RS04380;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_014613413.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 12680 13246 . - . ID=gene-CYJ01_RS04385;Name=CYJ01_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04385;old_locus_tag=CYJ01_04385 NZ_PJUR01000008.1 Protein Homology CDS 12680 13246 . - 0 ID=cds-WP_014613414.1;Parent=gene-CYJ01_RS04385;Dbxref=GenBank:WP_014613414.1;Name=WP_014613414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613414.1;locus_tag=CYJ01_RS04385;product=accessory gene regulator AgrB;protein_id=WP_014613414.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 13638 13718 . + . ID=gene-CYJ01_RS12475;Name=CYJ01_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12475 NZ_PJUR01000008.1 Protein Homology CDS 13638 13718 . + 0 ID=cds-WP_367884996.1;Parent=gene-CYJ01_RS12475;Dbxref=GenBank:WP_367884996.1;Name=WP_367884996.1;Note=Members of this family are produced with retention of the N-formyl-methionine at the N-terminus.;Ontology_term=GO:0019836,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: protein motif:HMM:NF017210.7;locus_tag=CYJ01_RS12475;product=delta-lysin family phenol-soluble modulin;protein_id=WP_367884996.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 14003 14806 . - . ID=gene-CYJ01_RS04390;Name=CYJ01_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04390;old_locus_tag=CYJ01_04390 NZ_PJUR01000008.1 Protein Homology CDS 14003 14806 . - 0 ID=cds-WP_014613416.1;Parent=gene-CYJ01_RS04390;Dbxref=GenBank:WP_014613416.1;Name=WP_014613416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=CYJ01_RS04390;product=carbon-nitrogen family hydrolase;protein_id=WP_014613416.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 14971 16332 . + . ID=gene-CYJ01_RS04395;Name=CYJ01_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04395;old_locus_tag=CYJ01_04395 NZ_PJUR01000008.1 Protein Homology CDS 14971 16332 . + 0 ID=cds-WP_070407746.1;Parent=gene-CYJ01_RS04395;Dbxref=GenBank:WP_070407746.1;Name=WP_070407746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613417.1;locus_tag=CYJ01_RS04395;product=SdrH family protein;protein_id=WP_070407746.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 16444 17211 . - . ID=gene-CYJ01_RS04400;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=CYJ01_RS04400;old_locus_tag=CYJ01_04400 NZ_PJUR01000008.1 Protein Homology CDS 16444 17211 . - 0 ID=cds-WP_014613418.1;Parent=gene-CYJ01_RS04400;Dbxref=GenBank:WP_014613418.1;Name=WP_014613418.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166409.1;locus_tag=CYJ01_RS04400;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_014613418.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 17381 17668 . + . ID=gene-CYJ01_RS04405;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=CYJ01_RS04405;old_locus_tag=CYJ01_04405 NZ_PJUR01000008.1 Protein Homology CDS 17381 17668 . + 0 ID=cds-WP_015729412.1;Parent=gene-CYJ01_RS04405;Dbxref=GenBank:WP_015729412.1;Name=WP_015729412.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=CYJ01_RS04405;product=co-chaperone GroES;protein_id=WP_015729412.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 17717 19336 . + . ID=gene-CYJ01_RS04410;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CYJ01_RS04410;old_locus_tag=CYJ01_04410 NZ_PJUR01000008.1 Protein Homology CDS 17717 19336 . + 0 ID=cds-WP_014613420.1;Parent=gene-CYJ01_RS04410;Dbxref=GenBank:WP_014613420.1;Name=WP_014613420.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CYJ01_RS04410;product=chaperonin GroEL;protein_id=WP_014613420.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 19746 20168 . + . ID=gene-CYJ01_RS04415;Name=CYJ01_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04415;old_locus_tag=CYJ01_04415 NZ_PJUR01000008.1 Protein Homology CDS 19746 20168 . + 0 ID=cds-WP_101457309.1;Parent=gene-CYJ01_RS04415;Dbxref=GenBank:WP_101457309.1;Name=WP_101457309.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613421.1;locus_tag=CYJ01_RS04415;product=GNAT family N-acetyltransferase;protein_id=WP_101457309.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 20347 21579 . - . ID=gene-CYJ01_RS04420;Name=CYJ01_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04420;old_locus_tag=CYJ01_04420 NZ_PJUR01000008.1 Protein Homology CDS 20347 21579 . - 0 ID=cds-WP_100007035.1;Parent=gene-CYJ01_RS04420;Dbxref=GenBank:WP_100007035.1;Name=WP_100007035.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166413.1;locus_tag=CYJ01_RS04420;product=acetylornithine deacetylase;protein_id=WP_100007035.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 21560 22081 . - . ID=gene-CYJ01_RS04425;Name=CYJ01_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04425;old_locus_tag=CYJ01_04425 NZ_PJUR01000008.1 Protein Homology CDS 21560 22081 . - 0 ID=cds-WP_014613423.1;Parent=gene-CYJ01_RS04425;Dbxref=GenBank:WP_014613423.1;Name=WP_014613423.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613423.1;locus_tag=CYJ01_RS04425;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_014613423.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 22097 22921 . - . ID=gene-CYJ01_RS04430;Name=CYJ01_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04430;old_locus_tag=CYJ01_04430 NZ_PJUR01000008.1 Protein Homology CDS 22097 22921 . - 0 ID=cds-WP_014613424.1;Parent=gene-CYJ01_RS04430;Dbxref=GenBank:WP_014613424.1;Name=WP_014613424.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=CYJ01_RS04430;product=SPL family radical SAM protein;protein_id=WP_014613424.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 22980 24269 . - . ID=gene-CYJ01_RS04435;Name=CYJ01_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04435;old_locus_tag=CYJ01_04435 NZ_PJUR01000008.1 Protein Homology CDS 22980 24269 . - 0 ID=cds-WP_015729405.1;Parent=gene-CYJ01_RS04435;Dbxref=GenBank:WP_015729405.1;Name=WP_015729405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=CYJ01_RS04435;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_015729405.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 24482 24613 . + . ID=gene-CYJ01_RS12240;Name=CYJ01_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12240 NZ_PJUR01000008.1 Protein Homology CDS 24482 24613 . + 0 ID=cds-WP_020219903.1;Parent=gene-CYJ01_RS12240;Dbxref=GenBank:WP_020219903.1;Name=WP_020219903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047567.1;locus_tag=CYJ01_RS12240;product=Trp-rich small protein;protein_id=WP_020219903.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 24872 25045 . + . ID=gene-CYJ01_RS12090;Name=CYJ01_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12090 NZ_PJUR01000008.1 Protein Homology CDS 24872 25045 . + 0 ID=cds-WP_014613426.1;Parent=gene-CYJ01_RS12090;Dbxref=GenBank:WP_014613426.1;Name=WP_014613426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166418.1;locus_tag=CYJ01_RS12090;product=SE1626 family protein;protein_id=WP_014613426.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 25489 26364 . + . ID=gene-CYJ01_RS04440;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04440;old_locus_tag=CYJ01_04440 NZ_PJUR01000008.1 Protein Homology CDS 25489 26364 . + 0 ID=cds-WP_014613427.1;Parent=gene-CYJ01_RS04440;Dbxref=GenBank:WP_014613427.1;Name=WP_014613427.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166419.1;locus_tag=CYJ01_RS04440;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_014613427.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 26361 27089 . + . ID=gene-CYJ01_RS04445;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04445;old_locus_tag=CYJ01_04445 NZ_PJUR01000008.1 Protein Homology CDS 26361 27089 . + 0 ID=cds-WP_101457310.1;Parent=gene-CYJ01_RS04445;Dbxref=GenBank:WP_101457310.1;Name=WP_101457310.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613428.1;locus_tag=CYJ01_RS04445;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_101457310.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 27507 28184 . + . ID=gene-CYJ01_RS04450;Name=CYJ01_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04450;old_locus_tag=CYJ01_04450 NZ_PJUR01000008.1 Protein Homology CDS 27507 28184 . + 0 ID=cds-WP_014613429.1;Parent=gene-CYJ01_RS04450;Dbxref=GenBank:WP_014613429.1;Name=WP_014613429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=CYJ01_RS04450;product=GntR family transcriptional regulator;protein_id=WP_014613429.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 28208 29758 . + . ID=gene-CYJ01_RS04455;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CYJ01_RS04455;old_locus_tag=CYJ01_04455 NZ_PJUR01000008.1 Protein Homology CDS 28208 29758 . + 0 ID=cds-WP_014613430.1;Parent=gene-CYJ01_RS04455;Dbxref=GenBank:WP_014613430.1;Name=WP_014613430.1;Ontology_term=GO:0009255,GO:0019521,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166422.1;locus_tag=CYJ01_RS04455;product=gluconokinase;protein_id=WP_014613430.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 29769 31130 . + . ID=gene-CYJ01_RS04460;Name=CYJ01_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04460;old_locus_tag=CYJ01_04460 NZ_PJUR01000008.1 Protein Homology CDS 29769 31130 . + 0 ID=cds-WP_014613431.1;Parent=gene-CYJ01_RS04460;Dbxref=GenBank:WP_014613431.1;Name=WP_014613431.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=CYJ01_RS04460;product=gluconate:H+ symporter;protein_id=WP_014613431.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 31218 31775 . - . ID=gene-CYJ01_RS04465;Name=CYJ01_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04465;old_locus_tag=CYJ01_04465 NZ_PJUR01000008.1 Protein Homology CDS 31218 31775 . - 0 ID=cds-WP_101457311.1;Parent=gene-CYJ01_RS04465;Dbxref=GenBank:WP_101457311.1;Name=WP_101457311.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166424.1;locus_tag=CYJ01_RS04465;product=thioredoxin family protein;protein_id=WP_101457311.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 31955 32518 . + . ID=gene-CYJ01_RS04470;Name=CYJ01_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04470;old_locus_tag=CYJ01_04470 NZ_PJUR01000008.1 Protein Homology CDS 31955 32518 . + 0 ID=cds-WP_014613433.1;Parent=gene-CYJ01_RS04470;Dbxref=GenBank:WP_014613433.1;Name=WP_014613433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=CYJ01_RS04470;product=HAAS signaling domain-containing protein;protein_id=WP_014613433.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 32515 33357 . + . ID=gene-CYJ01_RS04475;Name=CYJ01_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04475;old_locus_tag=CYJ01_04475 NZ_PJUR01000008.1 Protein Homology CDS 32515 33357 . + 0 ID=cds-WP_014613434.1;Parent=gene-CYJ01_RS04475;Dbxref=GenBank:WP_014613434.1;Name=WP_014613434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169323.1;locus_tag=CYJ01_RS04475;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_014613434.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 33459 34502 . - . ID=gene-CYJ01_RS04480;Name=CYJ01_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04480;old_locus_tag=CYJ01_04480 NZ_PJUR01000008.1 Protein Homology CDS 33459 34502 . - 0 ID=cds-WP_015729403.1;Parent=gene-CYJ01_RS04480;Dbxref=GenBank:WP_015729403.1;Name=WP_015729403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613435.1;locus_tag=CYJ01_RS04480;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_015729403.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 35215 35604 . - . ID=gene-CYJ01_RS04485;Name=CYJ01_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04485;old_locus_tag=CYJ01_04485 NZ_PJUR01000008.1 Protein Homology CDS 35215 35604 . - 0 ID=cds-WP_014613436.1;Parent=gene-CYJ01_RS04485;Dbxref=GenBank:WP_014613436.1;Name=WP_014613436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=CYJ01_RS04485;product=hypothetical protein;protein_id=WP_014613436.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 35771 35944 . + . ID=gene-CYJ01_RS12095;Name=CYJ01_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12095 NZ_PJUR01000008.1 Protein Homology CDS 35771 35944 . + 0 ID=cds-WP_014613437.1;Parent=gene-CYJ01_RS12095;Dbxref=GenBank:WP_014613437.1;Name=WP_014613437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613437.1;locus_tag=CYJ01_RS12095;product=hypothetical protein;protein_id=WP_014613437.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 36163 37212 . + . ID=gene-CYJ01_RS04490;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=CYJ01_RS04490;old_locus_tag=CYJ01_04490 NZ_PJUR01000008.1 Protein Homology CDS 36163 37212 . + 0 ID=cds-WP_101457312.1;Parent=gene-CYJ01_RS04490;Dbxref=GenBank:WP_101457312.1;Name=WP_101457312.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169327.1;locus_tag=CYJ01_RS04490;product=6-phosphogluconolactonase;protein_id=WP_101457312.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 37319 38698 . - . ID=gene-CYJ01_RS04495;Name=CYJ01_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04495;old_locus_tag=CYJ01_04495 NZ_PJUR01000008.1 Protein Homology CDS 37319 38698 . - 0 ID=cds-WP_014613439.1;Parent=gene-CYJ01_RS04495;Dbxref=GenBank:WP_014613439.1;Name=WP_014613439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219898.1;locus_tag=CYJ01_RS04495;product=aldehyde dehydrogenase;protein_id=WP_014613439.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 38968 39249 . - . ID=gene-CYJ01_RS04500;Name=CYJ01_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04500;old_locus_tag=CYJ01_04500 NZ_PJUR01000008.1 Protein Homology CDS 38968 39249 . - 0 ID=cds-WP_014613440.1;Parent=gene-CYJ01_RS04500;Dbxref=GenBank:WP_014613440.1;Name=WP_014613440.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166431.1;locus_tag=CYJ01_RS04500;product=GNAT family N-acetyltransferase;protein_id=WP_014613440.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 39279 40205 . - . ID=gene-CYJ01_RS04505;Name=CYJ01_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04505;old_locus_tag=CYJ01_04505 NZ_PJUR01000008.1 Protein Homology CDS 39279 40205 . - 0 ID=cds-WP_172425815.1;Parent=gene-CYJ01_RS04505;Dbxref=GenBank:WP_172425815.1;Name=WP_172425815.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445415.1;locus_tag=CYJ01_RS04505;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_172425815.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 40263 40814 . - . ID=gene-CYJ01_RS04510;Name=CYJ01_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04510;old_locus_tag=CYJ01_04510 NZ_PJUR01000008.1 Protein Homology CDS 40263 40814 . - 0 ID=cds-WP_014613442.1;Parent=gene-CYJ01_RS04510;Dbxref=GenBank:WP_014613442.1;Name=WP_014613442.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=CYJ01_RS04510;product=cysteine hydrolase family protein;protein_id=WP_014613442.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 40895 42001 . + . ID=gene-CYJ01_RS04515;Name=CYJ01_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04515;old_locus_tag=CYJ01_04515 NZ_PJUR01000008.1 Protein Homology CDS 40895 42001 . + 0 ID=cds-WP_101457313.1;Parent=gene-CYJ01_RS04515;Dbxref=GenBank:WP_101457313.1;Name=WP_101457313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613443.1;locus_tag=CYJ01_RS04515;product=glycosyl hydrolase family 28-related protein;protein_id=WP_101457313.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 42054 42857 . - . ID=gene-CYJ01_RS04520;Name=CYJ01_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04520;old_locus_tag=CYJ01_04520 NZ_PJUR01000008.1 Protein Homology CDS 42054 42857 . - 0 ID=cds-WP_014613444.1;Parent=gene-CYJ01_RS04520;Dbxref=GenBank:WP_014613444.1;Name=WP_014613444.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804670.1;locus_tag=CYJ01_RS04520;product=prephenate dehydratase;protein_id=WP_014613444.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 42901 43971 . - . ID=gene-CYJ01_RS04525;Name=CYJ01_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04525;old_locus_tag=CYJ01_04525 NZ_PJUR01000008.1 Protein Homology CDS 42901 43971 . - 0 ID=cds-WP_101457314.1;Parent=gene-CYJ01_RS04525;Dbxref=GenBank:WP_101457314.1;Name=WP_101457314.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=CYJ01_RS04525;product=nitric oxide synthase oxygenase;protein_id=WP_101457314.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 44603 46078 . + . ID=gene-CYJ01_RS04530;Name=CYJ01_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04530;old_locus_tag=CYJ01_04530 NZ_PJUR01000008.1 Protein Homology CDS 44603 46078 . + 0 ID=cds-WP_101457315.1;Parent=gene-CYJ01_RS04530;Dbxref=GenBank:WP_101457315.1;Name=WP_101457315.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169335.1;locus_tag=CYJ01_RS04530;product=nicotinate phosphoribosyltransferase;protein_id=WP_101457315.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 46071 46901 . + . ID=gene-CYJ01_RS04535;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CYJ01_RS04535;old_locus_tag=CYJ01_04535 NZ_PJUR01000008.1 Protein Homology CDS 46071 46901 . + 0 ID=cds-WP_037544162.1;Parent=gene-CYJ01_RS04535;Dbxref=GenBank:WP_037544162.1;Name=WP_037544162.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169336.1;locus_tag=CYJ01_RS04535;product=NAD(+) synthase;protein_id=WP_037544162.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 46963 47532 . + . ID=gene-CYJ01_RS04540;Name=CYJ01_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04540;old_locus_tag=CYJ01_04540 NZ_PJUR01000008.1 Protein Homology CDS 46963 47532 . + 0 ID=cds-WP_014613448.1;Parent=gene-CYJ01_RS04540;Dbxref=GenBank:WP_014613448.1;Name=WP_014613448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=CYJ01_RS04540;product=DUF2179 domain-containing protein;protein_id=WP_014613448.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 47522 47710 . + . ID=gene-CYJ01_RS04545;Name=CYJ01_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04545;old_locus_tag=CYJ01_04545 NZ_PJUR01000008.1 Protein Homology CDS 47522 47710 . + 0 ID=cds-WP_014613449.1;Parent=gene-CYJ01_RS04545;Dbxref=GenBank:WP_014613449.1;Name=WP_014613449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166440.1;locus_tag=CYJ01_RS04545;product=NETI motif-containing protein;protein_id=WP_014613449.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 48133 49428 . + . ID=gene-CYJ01_RS04550;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04550;old_locus_tag=CYJ01_04550 NZ_PJUR01000008.1 Protein Homology CDS 48133 49428 . + 0 ID=cds-WP_101457316.1;Parent=gene-CYJ01_RS04550;Dbxref=GenBank:WP_101457316.1;Name=WP_101457316.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275349.1;locus_tag=CYJ01_RS04550;product=adenylosuccinate lyase;protein_id=WP_101457316.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 49496 49798 . + . ID=gene-CYJ01_RS04555;Name=CYJ01_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04555;old_locus_tag=CYJ01_04555 NZ_PJUR01000008.1 Protein Homology CDS 49496 49798 . + 0 ID=cds-WP_014613451.1;Parent=gene-CYJ01_RS04555;Dbxref=GenBank:WP_014613451.1;Name=WP_014613451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166442.1;locus_tag=CYJ01_RS04555;product=YerC/YecD family TrpR-related protein;protein_id=WP_014613451.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 50730 51419 . + . ID=gene-CYJ01_RS04560;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04560;old_locus_tag=CYJ01_04560 NZ_PJUR01000008.1 Protein Homology CDS 50730 51419 . + 0 ID=cds-WP_014613453.1;Parent=gene-CYJ01_RS04560;Dbxref=GenBank:WP_014613453.1;Name=WP_014613453.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=CYJ01_RS04560;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_014613453.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 51419 53614 . + . ID=gene-CYJ01_RS04565;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04565;old_locus_tag=CYJ01_04565 NZ_PJUR01000008.1 Protein Homology CDS 51419 53614 . + 0 ID=cds-WP_065520431.1;Parent=gene-CYJ01_RS04565;Dbxref=GenBank:WP_065520431.1;Name=WP_065520431.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=CYJ01_RS04565;product=DNA helicase PcrA;protein_id=WP_065520431.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 53618 55621 . + . ID=gene-CYJ01_RS04570;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04570;old_locus_tag=CYJ01_04570 NZ_PJUR01000008.1 Protein Homology CDS 53618 55621 . + 0 ID=cds-WP_101457317.1;Parent=gene-CYJ01_RS04570;Dbxref=GenBank:WP_101457317.1;Name=WP_101457317.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166445.1;locus_tag=CYJ01_RS04570;product=NAD-dependent DNA ligase LigA;protein_id=WP_101457317.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 55633 56838 . + . ID=gene-CYJ01_RS04575;Name=CYJ01_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04575;old_locus_tag=CYJ01_04575 NZ_PJUR01000008.1 Protein Homology CDS 55633 56838 . + 0 ID=cds-WP_014613456.1;Parent=gene-CYJ01_RS04575;Dbxref=GenBank:WP_014613456.1;Name=WP_014613456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664913.1;locus_tag=CYJ01_RS04575;product=CamS family sex pheromone protein;protein_id=WP_014613456.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 57227 58780 . - . ID=gene-CYJ01_RS04580;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CYJ01_RS04580;old_locus_tag=CYJ01_04580 NZ_PJUR01000008.1 Protein Homology CDS 57227 58780 . - 0 ID=cds-WP_020219895.1;Parent=gene-CYJ01_RS04580;Dbxref=GenBank:WP_020219895.1;Name=WP_020219895.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219895.1;locus_tag=CYJ01_RS04580;product=sodium/proline symporter PutP;protein_id=WP_020219895.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 59135 59437 . + . ID=gene-CYJ01_RS04585;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04585;old_locus_tag=CYJ01_04585 NZ_PJUR01000008.1 Protein Homology CDS 59135 59437 . + 0 ID=cds-WP_014613458.1;Parent=gene-CYJ01_RS04585;Dbxref=GenBank:WP_014613458.1;Name=WP_014613458.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=CYJ01_RS04585;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014613458.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 59440 60900 . + . ID=gene-CYJ01_RS04590;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04590;old_locus_tag=CYJ01_04590 NZ_PJUR01000008.1 Protein Homology CDS 59440 60900 . + 0 ID=cds-WP_014613459.1;Parent=gene-CYJ01_RS04590;Dbxref=GenBank:WP_014613459.1;Name=WP_014613459.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CYJ01_RS04590;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_014613459.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 60914 62341 . + . ID=gene-CYJ01_RS04595;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04595;old_locus_tag=CYJ01_04595 NZ_PJUR01000008.1 Protein Homology CDS 60914 62341 . + 0 ID=cds-WP_014613460.1;Parent=gene-CYJ01_RS04595;Dbxref=GenBank:WP_014613460.1;Name=WP_014613460.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=CYJ01_RS04595;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014613460.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 63019 63951 . + . ID=gene-CYJ01_RS04600;Name=CYJ01_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04600;old_locus_tag=CYJ01_04600 NZ_PJUR01000008.1 Protein Homology CDS 63019 63951 . + 0 ID=cds-WP_014613461.1;Parent=gene-CYJ01_RS04600;Dbxref=GenBank:WP_014613461.1;Name=WP_014613461.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=CYJ01_RS04600;product=diacylglycerol kinase;protein_id=WP_014613461.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 64123 65487 . + . ID=gene-CYJ01_RS04605;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04605;old_locus_tag=CYJ01_04605 NZ_PJUR01000008.1 Protein Homology CDS 64123 65487 . + 0 ID=cds-WP_015729392.1;Parent=gene-CYJ01_RS04605;Dbxref=GenBank:WP_015729392.1;Name=WP_015729392.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613462.1;locus_tag=CYJ01_RS04605;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_015729392.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 65960 66844 . + . ID=gene-CYJ01_RS04610;Name=CYJ01_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04610;old_locus_tag=CYJ01_04610 NZ_PJUR01000008.1 Protein Homology CDS 65960 66844 . + 0 ID=cds-WP_101457318.1;Parent=gene-CYJ01_RS04610;Dbxref=GenBank:WP_101457318.1;Name=WP_101457318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01716.1;locus_tag=CYJ01_RS04610;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=WP_101457318.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 66917 67042 . + . ID=gene-CYJ01_RS12480;Name=CYJ01_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12480 NZ_PJUR01000008.1 Protein Homology CDS 66917 67042 . + 0 ID=cds-WP_014613468.1;Parent=gene-CYJ01_RS12480;Dbxref=GenBank:WP_014613468.1;Name=WP_014613468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041055.1;locus_tag=CYJ01_RS12480;product=ryptide family R-Y-crosslinked RiPP peptide;protein_id=WP_014613468.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 67060 67227 . + . ID=gene-CYJ01_RS12100;Name=CYJ01_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12100 NZ_PJUR01000008.1 GeneMarkS-2+ CDS 67060 67227 . + 0 ID=cds-WP_198587996.1;Parent=gene-CYJ01_RS12100;Dbxref=GenBank:WP_198587996.1;Name=WP_198587996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS12100;product=hypothetical protein;protein_id=WP_198587996.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 67238 68014 . + . ID=gene-CYJ01_RS12245;Name=CYJ01_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12245 NZ_PJUR01000008.1 Protein Homology CDS 67238 68014 . + 0 ID=cds-WP_232331244.1;Parent=gene-CYJ01_RS12245;Dbxref=GenBank:WP_232331244.1;Name=WP_232331244.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: protein motif:HMM:NF015983.7;locus_tag=CYJ01_RS12245;product=radical SAM protein;protein_id=WP_232331244.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 68082 68453 . + . ID=gene-CYJ01_RS12250;Name=CYJ01_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12250 NZ_PJUR01000008.1 Protein Homology CDS 68082 68453 . + 0 ID=cds-WP_241900527.1;Parent=gene-CYJ01_RS12250;Dbxref=GenBank:WP_241900527.1;Name=WP_241900527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=CYJ01_RS12250;product=SPASM domain-containing protein;protein_id=WP_241900527.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 68446 69624 . + . ID=gene-CYJ01_RS04620;Name=CYJ01_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04620;old_locus_tag=CYJ01_04620 NZ_PJUR01000008.1 Protein Homology CDS 68446 69624 . + 0 ID=cds-WP_101457319.1;Parent=gene-CYJ01_RS04620;Dbxref=GenBank:WP_101457319.1;Name=WP_101457319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613470.1;locus_tag=CYJ01_RS04620;product=ryptide export MFS transporter;protein_id=WP_101457319.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 70014 70556 . + . ID=gene-CYJ01_RS04625;Name=CYJ01_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04625;old_locus_tag=CYJ01_04625 NZ_PJUR01000008.1 Protein Homology CDS 70014 70556 . + 0 ID=cds-WP_014613471.1;Parent=gene-CYJ01_RS04625;Dbxref=GenBank:WP_014613471.1;Name=WP_014613471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613471.1;locus_tag=CYJ01_RS04625;product=metalloprotease family protein;protein_id=WP_014613471.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 70661 71731 . + . ID=gene-CYJ01_RS04630;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04630;old_locus_tag=CYJ01_04630 NZ_PJUR01000008.1 Protein Homology CDS 70661 71731 . + 0 ID=cds-WP_014613472.1;Parent=gene-CYJ01_RS04630;Dbxref=GenBank:WP_014613472.1;Name=WP_014613472.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=CYJ01_RS04630;product=DNA polymerase IV;protein_id=WP_014613472.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 71726 72286 . - . ID=gene-CYJ01_RS04635;Name=CYJ01_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04635;old_locus_tag=CYJ01_04635 NZ_PJUR01000008.1 Protein Homology CDS 71726 72286 . - 0 ID=cds-WP_014613473.1;Parent=gene-CYJ01_RS04635;Dbxref=GenBank:WP_014613473.1;Name=WP_014613473.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=CYJ01_RS04635;product=3'-5' exonuclease;protein_id=WP_014613473.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 72575 73078 . - . ID=gene-CYJ01_RS04640;Name=CYJ01_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04640;old_locus_tag=CYJ01_04640 NZ_PJUR01000008.1 Protein Homology CDS 72575 73078 . - 0 ID=cds-WP_014613474.1;Parent=gene-CYJ01_RS04640;Dbxref=GenBank:WP_014613474.1;Name=WP_014613474.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613474.1;locus_tag=CYJ01_RS04640;product=ferritin;protein_id=WP_014613474.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 73275 74585 . + . ID=gene-CYJ01_RS04645;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=CYJ01_RS04645;old_locus_tag=CYJ01_04645 NZ_PJUR01000008.1 Protein Homology CDS 73275 74585 . + 0 ID=cds-WP_014613475.1;Parent=gene-CYJ01_RS04645;Dbxref=GenBank:WP_014613475.1;Name=WP_014613475.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166457.1;locus_tag=CYJ01_RS04645;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_014613475.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 74587 75309 . + . ID=gene-CYJ01_RS04650;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04650;old_locus_tag=CYJ01_04650 NZ_PJUR01000008.1 Protein Homology CDS 74587 75309 . + 0 ID=cds-WP_014613476.1;Parent=gene-CYJ01_RS04650;Dbxref=GenBank:WP_014613476.1;Name=WP_014613476.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613476.1;locus_tag=CYJ01_RS04650;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_014613476.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 76277 77275 . - . ID=gene-CYJ01_RS04655;Name=CYJ01_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04655;old_locus_tag=CYJ01_04655 NZ_PJUR01000008.1 Protein Homology CDS 76277 77275 . - 0 ID=cds-WP_014613477.1;Parent=gene-CYJ01_RS04655;Dbxref=GenBank:WP_014613477.1;Name=WP_014613477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169359.1;locus_tag=CYJ01_RS04655;product=FUSC family protein;protein_id=WP_014613477.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 77372 78133 . + . ID=gene-CYJ01_RS04660;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CYJ01_RS04660;old_locus_tag=CYJ01_04660 NZ_PJUR01000008.1 Protein Homology CDS 77372 78133 . + 0 ID=cds-WP_014613478.1;Parent=gene-CYJ01_RS04660;Dbxref=GenBank:WP_014613478.1;Name=WP_014613478.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169360.1;locus_tag=CYJ01_RS04660;product=type I methionyl aminopeptidase;protein_id=WP_014613478.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 78231 78620 . + . ID=gene-CYJ01_RS04665;Name=CYJ01_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04665;old_locus_tag=CYJ01_04665 NZ_PJUR01000008.1 Protein Homology CDS 78231 78620 . + 0 ID=cds-WP_014613479.1;Parent=gene-CYJ01_RS04665;Dbxref=GenBank:WP_014613479.1;Name=WP_014613479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613479.1;locus_tag=CYJ01_RS04665;product=hypothetical protein;protein_id=WP_014613479.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 78633 79334 . + . ID=gene-CYJ01_RS04670;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=CYJ01_RS04670;old_locus_tag=CYJ01_04670 NZ_PJUR01000008.1 Protein Homology CDS 78633 79334 . + 0 ID=cds-WP_014613480.1;Parent=gene-CYJ01_RS04670;Dbxref=GenBank:WP_014613480.1;Name=WP_014613480.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=CYJ01_RS04670;product=cell wall-active antibiotics response protein VraT;protein_id=WP_014613480.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 79331 80374 . + . ID=gene-CYJ01_RS04675;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=CYJ01_RS04675;old_locus_tag=CYJ01_04675 NZ_PJUR01000008.1 Protein Homology CDS 79331 80374 . + 0 ID=cds-WP_014613481.1;Parent=gene-CYJ01_RS04675;Dbxref=GenBank:WP_014613481.1;Name=WP_014613481.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=CYJ01_RS04675;product=sensor histidine kinase VraS;protein_id=WP_014613481.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 80364 80993 . + . ID=gene-CYJ01_RS04680;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=CYJ01_RS04680;old_locus_tag=CYJ01_04680 NZ_PJUR01000008.1 Protein Homology CDS 80364 80993 . + 0 ID=cds-WP_014613482.1;Parent=gene-CYJ01_RS04680;Dbxref=GenBank:WP_014613482.1;Name=WP_014613482.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=CYJ01_RS04680;product=response regulator transcription factor VraR;protein_id=WP_014613482.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 81560 82141 . - . ID=gene-CYJ01_RS04685;Name=CYJ01_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04685;old_locus_tag=CYJ01_04685 NZ_PJUR01000008.1 Protein Homology CDS 81560 82141 . - 0 ID=cds-WP_070407816.1;Parent=gene-CYJ01_RS04685;Dbxref=GenBank:WP_070407816.1;Name=WP_070407816.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729388.1;locus_tag=CYJ01_RS04685;product=beta-class carbonic anhydrase;protein_id=WP_070407816.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 82174 83511 . - . ID=gene-CYJ01_RS04690;Name=CYJ01_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04690;old_locus_tag=CYJ01_04690 NZ_PJUR01000008.1 Protein Homology CDS 82174 83511 . - 0 ID=cds-WP_015729387.1;Parent=gene-CYJ01_RS04690;Dbxref=GenBank:WP_015729387.1;Name=WP_015729387.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729387.1;locus_tag=CYJ01_RS04690;product=YihY/virulence factor BrkB family protein;protein_id=WP_015729387.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 83727 84014 . - . ID=gene-CYJ01_RS04695;Name=CYJ01_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04695;old_locus_tag=CYJ01_04695 NZ_PJUR01000008.1 Protein Homology CDS 83727 84014 . - 0 ID=cds-WP_014613485.1;Parent=gene-CYJ01_RS04695;Dbxref=GenBank:WP_014613485.1;Name=WP_014613485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169367.1;locus_tag=CYJ01_RS04695;product=YtxH domain-containing protein;protein_id=WP_014613485.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 84022 84480 . - . ID=gene-CYJ01_RS04700;Name=CYJ01_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04700;old_locus_tag=CYJ01_04700 NZ_PJUR01000008.1 Protein Homology CDS 84022 84480 . - 0 ID=cds-WP_101457320.1;Parent=gene-CYJ01_RS04700;Dbxref=GenBank:WP_101457320.1;Name=WP_101457320.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=CYJ01_RS04700;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_101457320.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 84614 84817 . + . ID=gene-CYJ01_RS04705;Name=CYJ01_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04705;old_locus_tag=CYJ01_04705 NZ_PJUR01000008.1 Protein Homology CDS 84614 84817 . + 0 ID=cds-WP_014613487.1;Parent=gene-CYJ01_RS04705;Dbxref=GenBank:WP_014613487.1;Name=WP_014613487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482850.1;locus_tag=CYJ01_RS04705;product=DUF1128 family protein;protein_id=WP_014613487.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 84839 86071 . + . ID=gene-CYJ01_RS04710;Name=CYJ01_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04710;old_locus_tag=CYJ01_04710 NZ_PJUR01000008.1 Protein Homology CDS 84839 86071 . + 0 ID=cds-WP_096536100.1;Parent=gene-CYJ01_RS04710;Dbxref=GenBank:WP_096536100.1;Name=WP_096536100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729386.1;locus_tag=CYJ01_RS04710;product=aminopeptidase;protein_id=WP_096536100.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 86090 86611 . + . ID=gene-CYJ01_RS04715;Name=CYJ01_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04715;old_locus_tag=CYJ01_04715 NZ_PJUR01000008.1 Protein Homology CDS 86090 86611 . + 0 ID=cds-WP_014613489.1;Parent=gene-CYJ01_RS04715;Dbxref=GenBank:WP_014613489.1;Name=WP_014613489.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166469.1;locus_tag=CYJ01_RS04715;product=acyl-CoA thioesterase;protein_id=WP_014613489.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 86676 87815 . - . ID=gene-CYJ01_RS04720;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04720;old_locus_tag=CYJ01_04720 NZ_PJUR01000008.1 Protein Homology CDS 86676 87815 . - 0 ID=cds-WP_101457321.1;Parent=gene-CYJ01_RS04720;Dbxref=GenBank:WP_101457321.1;Name=WP_101457321.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219887.1;locus_tag=CYJ01_RS04720;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_101457321.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 87931 88092 . + . ID=gene-CYJ01_RS12105;Name=CYJ01_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12105 NZ_PJUR01000008.1 Protein Homology CDS 87931 88092 . + 0 ID=cds-WP_015729384.1;Parent=gene-CYJ01_RS12105;Dbxref=GenBank:WP_015729384.1;Name=WP_015729384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=CYJ01_RS12105;product=SE1561 family protein;protein_id=WP_015729384.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 88168 88683 . + . ID=gene-CYJ01_RS04725;Name=CYJ01_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04725;old_locus_tag=CYJ01_04725 NZ_PJUR01000008.1 Protein Homology CDS 88168 88683 . + 0 ID=cds-WP_100006625.1;Parent=gene-CYJ01_RS04725;Dbxref=GenBank:WP_100006625.1;Name=WP_100006625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500510.1;locus_tag=CYJ01_RS04725;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_100006625.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 89258 91003 . - . ID=gene-CYJ01_RS04730;Name=CYJ01_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04730;old_locus_tag=CYJ01_04730 NZ_PJUR01000008.1 Protein Homology CDS 89258 91003 . - 0 ID=cds-WP_015729383.1;Parent=gene-CYJ01_RS04730;Dbxref=GenBank:WP_015729383.1;Name=WP_015729383.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=CYJ01_RS04730;product=pyruvate oxidase;protein_id=WP_015729383.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 91204 92001 . + . ID=gene-CYJ01_RS04735;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04735;old_locus_tag=CYJ01_04735 NZ_PJUR01000008.1 Protein Homology CDS 91204 92001 . + 0 ID=cds-WP_101457322.1;Parent=gene-CYJ01_RS04735;Dbxref=GenBank:WP_101457322.1;Name=WP_101457322.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166474.1;locus_tag=CYJ01_RS04735;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_101457322.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 92186 92989 . + . ID=gene-CYJ01_RS04740;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CYJ01_RS04740;old_locus_tag=CYJ01_04740 NZ_PJUR01000008.1 Protein Homology CDS 92186 92989 . + 0 ID=cds-WP_015729382.1;Parent=gene-CYJ01_RS04740;Dbxref=GenBank:WP_015729382.1;Name=WP_015729382.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=CYJ01_RS04740;product=recombination regulator RecX;protein_id=WP_015729382.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 92982 93296 . + . ID=gene-CYJ01_RS04745;Name=CYJ01_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04745;old_locus_tag=CYJ01_04745 NZ_PJUR01000008.1 Protein Homology CDS 92982 93296 . + 0 ID=cds-WP_014613497.1;Parent=gene-CYJ01_RS04745;Dbxref=GenBank:WP_014613497.1;Name=WP_014613497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509976.1;locus_tag=CYJ01_RS04745;product=YfhH family protein;protein_id=WP_014613497.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 93312 94841 . + . ID=gene-CYJ01_RS04750;Name=CYJ01_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04750;old_locus_tag=CYJ01_04750 NZ_PJUR01000008.1 Protein Homology CDS 93312 94841 . + 0 ID=cds-WP_101457323.1;Parent=gene-CYJ01_RS04750;Dbxref=GenBank:WP_101457323.1;Name=WP_101457323.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613498.1;locus_tag=CYJ01_RS04750;product=ATP-binding cassette domain-containing protein;protein_id=WP_101457323.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 94845 95648 . + . ID=gene-CYJ01_RS04755;Name=CYJ01_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04755;old_locus_tag=CYJ01_04755 NZ_PJUR01000008.1 Protein Homology CDS 94845 95648 . + 0 ID=cds-WP_201800441.1;Parent=gene-CYJ01_RS04755;Dbxref=GenBank:WP_201800441.1;Name=WP_201800441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=CYJ01_RS04755;product=teichoic acid translocation permease;protein_id=WP_201800441.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 96119 97096 . - . ID=gene-CYJ01_RS04760;Name=CYJ01_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04760;old_locus_tag=CYJ01_04760 NZ_PJUR01000008.1 Protein Homology CDS 96119 97096 . - 0 ID=cds-WP_101457324.1;Parent=gene-CYJ01_RS04760;Dbxref=GenBank:WP_101457324.1;Name=WP_101457324.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=CYJ01_RS04760;product=metal-dependent hydrolase;protein_id=WP_101457324.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 97187 98233 . + . ID=gene-CYJ01_RS04765;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CYJ01_RS04765;old_locus_tag=CYJ01_04765 NZ_PJUR01000008.1 Protein Homology CDS 97187 98233 . + 0 ID=cds-WP_096636776.1;Parent=gene-CYJ01_RS04765;Dbxref=GenBank:WP_096636776.1;Name=WP_096636776.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166479.1;locus_tag=CYJ01_RS04765;product=A/G-specific adenine glycosylase;protein_id=WP_096636776.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 98299 98841 . + . ID=gene-CYJ01_RS04770;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=CYJ01_RS04770;old_locus_tag=CYJ01_04770 NZ_PJUR01000008.1 Protein Homology CDS 98299 98841 . + 0 ID=cds-WP_014613502.1;Parent=gene-CYJ01_RS04770;Dbxref=GenBank:WP_014613502.1;Name=WP_014613502.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CYJ01_RS04770;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_014613502.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 99571 100713 . - . ID=gene-CYJ01_RS04775;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04775;old_locus_tag=CYJ01_04775 NZ_PJUR01000008.1 Protein Homology CDS 99571 100713 . - 0 ID=cds-WP_101457325.1;Parent=gene-CYJ01_RS04775;Dbxref=GenBank:WP_101457325.1;Name=WP_101457325.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614339.1;locus_tag=CYJ01_RS04775;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_101457325.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 100710 100946 . - . ID=gene-CYJ01_RS04780;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04780;old_locus_tag=CYJ01_04780 NZ_PJUR01000008.1 Protein Homology CDS 100710 100946 . - 0 ID=cds-WP_015728919.1;Parent=gene-CYJ01_RS04780;Dbxref=GenBank:WP_015728919.1;Name=WP_015728919.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CYJ01_RS04780;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_015728919.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 100959 102176 . - . ID=gene-CYJ01_RS04785;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04785;old_locus_tag=CYJ01_04785 NZ_PJUR01000008.1 Protein Homology CDS 100959 102176 . - 0 ID=cds-WP_037543462.1;Parent=gene-CYJ01_RS04785;Dbxref=GenBank:WP_037543462.1;Name=WP_037543462.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=CYJ01_RS04785;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_037543462.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 102173 103627 . - . ID=gene-CYJ01_RS04790;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04790;old_locus_tag=CYJ01_04790 NZ_PJUR01000008.1 Protein Homology CDS 102173 103627 . - 0 ID=cds-WP_015728921.1;Parent=gene-CYJ01_RS04790;Dbxref=GenBank:WP_015728921.1;Name=WP_015728921.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614336.1;locus_tag=CYJ01_RS04790;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_015728921.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 103647 103775 . - . ID=gene-CYJ01_RS04795;Name=CYJ01_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04795;old_locus_tag=CYJ01_04795 NZ_PJUR01000008.1 Protein Homology CDS 103647 103775 . - 0 ID=cds-WP_014614335.1;Parent=gene-CYJ01_RS04795;Dbxref=GenBank:WP_014614335.1;Name=WP_014614335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=CYJ01_RS04795;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_014614335.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 104129 105643 . + . ID=gene-CYJ01_RS04800;Name=CYJ01_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04800;old_locus_tag=CYJ01_04800 NZ_PJUR01000008.1 Protein Homology CDS 104129 105643 . + 0 ID=cds-WP_063284627.1;Parent=gene-CYJ01_RS04800;Dbxref=GenBank:WP_063284627.1;Name=WP_063284627.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614334.1;locus_tag=CYJ01_RS04800;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_063284627.1;transl_table=11 NZ_PJUR01000008.1 RefSeq gene 105739 106236 . - . ID=gene-CYJ01_RS04805;Name=CYJ01_RS04805;end_range=106236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04805;old_locus_tag=CYJ01_04805;partial=true NZ_PJUR01000008.1 Protein Homology CDS 105739 106236 . - 0 ID=cds-WP_133121610.1;Parent=gene-CYJ01_RS04805;Dbxref=GenBank:WP_133121610.1;Name=WP_133121610.1;Ontology_term=GO:0009986;end_range=106236,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ01_RS04805;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_133121610.1;transl_table=11 ##sequence-region NZ_PJUR01000079.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000079.1 RefSeq region 1 265 . + . ID=NZ_PJUR01000079.1:1..265;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000079.1 RefSeq gene 1 265 . + . ID=gene-CYJ01_RS12045;Name=CYJ01_RS12045;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12045;old_locus_tag=CYJ01_11860;partial=true;start_range=.,1 NZ_PJUR01000079.1 Protein Homology CDS 1 265 . + 2 ID=cds-WP_198588004.1;Parent=gene-CYJ01_RS12045;Dbxref=GenBank:WP_198588004.1;Name=WP_198588004.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038186.1;locus_tag=CYJ01_RS12045;partial=true;product=YPDG domain-containing protein;protein_id=WP_198588004.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000080.1 1 1901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000080.1 RefSeq region 1 1901 . + . ID=NZ_PJUR01000080.1:1..1901;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000080.1 RefSeq gene 271 789 . - . ID=gene-CYJ01_RS11855;Name=CYJ01_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11855;old_locus_tag=CYJ01_11865 NZ_PJUR01000080.1 GeneMarkS-2+ CDS 271 789 . - 0 ID=cds-WP_241900552.1;Parent=gene-CYJ01_RS11855;Dbxref=GenBank:WP_241900552.1;Name=WP_241900552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11855;product=hypothetical protein;protein_id=WP_241900552.1;transl_table=11 NZ_PJUR01000080.1 RefSeq pseudogene 839 1629 . + . ID=gene-CYJ01_RS11860;Name=CYJ01_RS11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11860;old_locus_tag=CYJ01_11870;pseudo=true NZ_PJUR01000080.1 Protein Homology CDS 839 1629 . + 0 ID=cds-CYJ01_RS11860;Parent=gene-CYJ01_RS11860;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000111526.1;locus_tag=CYJ01_RS11860;product=ParA family protein;pseudo=true;transl_table=11 NZ_PJUR01000080.1 RefSeq pseudogene 1639 1823 . + . ID=gene-CYJ01_RS11865;Name=CYJ01_RS11865;end_range=1823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11865;old_locus_tag=CYJ01_11875;partial=true;pseudo=true NZ_PJUR01000080.1 Protein Homology CDS 1639 1823 . + 0 ID=cds-CYJ01_RS11865;Parent=gene-CYJ01_RS11865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448025.1;locus_tag=CYJ01_RS11865;partial=true;product=plasmid replication-associated protein;pseudo=true;transl_table=11 ##sequence-region NZ_PJUR01000081.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000081.1 RefSeq region 1 277 . + . ID=NZ_PJUR01000081.1:1..277;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000081.1 RefSeq gene 1 277 . + . ID=gene-CYJ01_RS11870;Name=CYJ01_RS11870;end_range=277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11870;old_locus_tag=CYJ01_11880;partial=true;start_range=.,1 NZ_PJUR01000081.1 Protein Homology CDS 1 277 . + 2 ID=cds-WP_241900553.1;Parent=gene-CYJ01_RS11870;Dbxref=GenBank:WP_241900553.1;Name=WP_241900553.1;end_range=277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11870;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241900553.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000082.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000082.1 RefSeq region 1 347 . + . ID=NZ_PJUR01000082.1:1..347;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N ##sequence-region NZ_PJUR01000083.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000083.1 RefSeq region 1 236 . + . ID=NZ_PJUR01000083.1:1..236;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N ##sequence-region NZ_PJUR01000084.1 1 584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000084.1 RefSeq region 1 584 . + . ID=NZ_PJUR01000084.1:1..584;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000084.1 RefSeq gene 118 584 . + . ID=gene-CYJ01_RS11875;Name=CYJ01_RS11875;end_range=584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11875;old_locus_tag=CYJ01_11885;partial=true NZ_PJUR01000084.1 Protein Homology CDS 118 584 . + 0 ID=cds-WP_241900554.1;Parent=gene-CYJ01_RS11875;Dbxref=GenBank:WP_241900554.1;Name=WP_241900554.1;end_range=584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS11875;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241900554.1;transl_table=11 ##sequence-region NZ_PJUR01000085.1 1 216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000085.1 RefSeq region 1 216 . + . ID=NZ_PJUR01000085.1:1..216;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000085.1 RefSeq pseudogene 1 216 . - . ID=gene-CYJ01_RS12175;Name=CYJ01_RS12175;end_range=216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12175;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000085.1 Protein Homology CDS 1 216 . - 0 ID=cds-CYJ01_RS12175;Parent=gene-CYJ01_RS12175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220337.1;locus_tag=CYJ01_RS12175;partial=true;product=MSCRAMM family adhesin SdrC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000086.1 1 204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000086.1 RefSeq region 1 204 . + . ID=NZ_PJUR01000086.1:1..204;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000086.1 RefSeq pseudogene 1 204 . - . ID=gene-CYJ01_RS11885;Name=CYJ01_RS11885;end_range=204,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS11885;old_locus_tag=CYJ01_11895;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000086.1 Protein Homology CDS 1 204 . - 2 ID=cds-CYJ01_RS11885;Parent=gene-CYJ01_RS11885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=204,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ01_RS11885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000087.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000087.1 RefSeq region 1 277 . + . ID=NZ_PJUR01000087.1:1..277;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000087.1 RefSeq gene 133 277 . - . ID=gene-CYJ01_RS11890;Name=CYJ01_RS11890;end_range=277,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ01_RS11890;old_locus_tag=CYJ01_11900;partial=true NZ_PJUR01000087.1 cmsearch rRNA 133 277 . - . ID=rna-CYJ01_RS11890;Parent=gene-CYJ01_RS11890;Dbxref=RFAM:RF02541;end_range=277,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11890;partial=true;product=23S ribosomal RNA NZ_PJUR01000087.1 cmsearch exon 133 277 . - . ID=exon-CYJ01_RS11890-1;Parent=rna-CYJ01_RS11890;Dbxref=RFAM:RF02541;end_range=277,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ01_RS11890;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PJUR01000009.1 1 80050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000009.1 RefSeq region 1 80050 . + . ID=NZ_PJUR01000009.1:1..80050;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000009.1 RefSeq pseudogene 954 1336 . - . ID=gene-CYJ01_RS12485;Name=CYJ01_RS12485;end_range=1336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12485;partial=true;pseudo=true;start_range=.,954 NZ_PJUR01000009.1 Protein Homology CDS 954 1336 . - 0 ID=cds-CYJ01_RS12485;Parent=gene-CYJ01_RS12485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ01_RS12485;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,954;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 1451 3388 . - . ID=gene-CYJ01_RS04815;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=CYJ01_RS04815;old_locus_tag=CYJ01_04815 NZ_PJUR01000009.1 Protein Homology CDS 1451 3388 . - 0 ID=cds-WP_037543783.1;Parent=gene-CYJ01_RS04815;Dbxref=GenBank:WP_037543783.1;Name=WP_037543783.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834931.1;locus_tag=CYJ01_RS04815;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_037543783.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 3733 4737 . - . ID=gene-CYJ01_RS04820;Name=CYJ01_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04820;old_locus_tag=CYJ01_04820 NZ_PJUR01000009.1 Protein Homology CDS 3733 4737 . - 0 ID=cds-WP_101457327.1;Parent=gene-CYJ01_RS04820;Dbxref=GenBank:WP_101457327.1;Name=WP_101457327.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=CYJ01_RS04820;product=5-oxoprolinase subunit C family protein;protein_id=WP_101457327.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 4734 5417 . - . ID=gene-CYJ01_RS04825;Name=CYJ01_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04825;old_locus_tag=CYJ01_04825 NZ_PJUR01000009.1 Protein Homology CDS 4734 5417 . - 0 ID=cds-WP_014614544.1;Parent=gene-CYJ01_RS04825;Dbxref=GenBank:WP_014614544.1;Name=WP_014614544.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166150.1;locus_tag=CYJ01_RS04825;product=5-oxoprolinase subunit B family protein;protein_id=WP_014614544.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 5428 5637 . - . ID=gene-CYJ01_RS04830;Name=CYJ01_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04830;old_locus_tag=CYJ01_04830 NZ_PJUR01000009.1 Protein Homology CDS 5428 5637 . - 0 ID=cds-WP_014614545.1;Parent=gene-CYJ01_RS04830;Dbxref=GenBank:WP_014614545.1;Name=WP_014614545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614545.1;locus_tag=CYJ01_RS04830;product=hypothetical protein;protein_id=WP_014614545.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 5646 6260 . - . ID=gene-CYJ01_RS04835;Name=CYJ01_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04835;old_locus_tag=CYJ01_04835 NZ_PJUR01000009.1 Protein Homology CDS 5646 6260 . - 0 ID=cds-WP_065354524.1;Parent=gene-CYJ01_RS04835;Dbxref=GenBank:WP_065354524.1;Name=WP_065354524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166152.1;locus_tag=CYJ01_RS04835;product=aminotransferase class IV;protein_id=WP_065354524.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 6257 7405 . - . ID=gene-CYJ01_RS04840;Name=CYJ01_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04840;old_locus_tag=CYJ01_04840 NZ_PJUR01000009.1 Protein Homology CDS 6257 7405 . - 0 ID=cds-WP_037543791.1;Parent=gene-CYJ01_RS04840;Dbxref=GenBank:WP_037543791.1;Name=WP_037543791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=CYJ01_RS04840;product=chorismate-binding protein;protein_id=WP_037543791.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 7389 7982 . - . ID=gene-CYJ01_RS04845;Name=CYJ01_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04845;old_locus_tag=CYJ01_04845 NZ_PJUR01000009.1 Protein Homology CDS 7389 7982 . - 0 ID=cds-WP_101457328.1;Parent=gene-CYJ01_RS04845;Dbxref=GenBank:WP_101457328.1;Name=WP_101457328.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=CYJ01_RS04845;product=anthranilate synthase component II;protein_id=WP_101457328.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 8243 8911 . + . ID=gene-CYJ01_RS04850;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CYJ01_RS04850;old_locus_tag=CYJ01_04850 NZ_PJUR01000009.1 Protein Homology CDS 8243 8911 . + 0 ID=cds-WP_014614548.1;Parent=gene-CYJ01_RS04850;Dbxref=GenBank:WP_014614548.1;Name=WP_014614548.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166155.1;locus_tag=CYJ01_RS04850;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_014614548.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 8911 9342 . + . ID=gene-CYJ01_RS04855;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CYJ01_RS04855;old_locus_tag=CYJ01_04855 NZ_PJUR01000009.1 Protein Homology CDS 8911 9342 . + 0 ID=cds-WP_014614549.1;Parent=gene-CYJ01_RS04855;Dbxref=GenBank:WP_014614549.1;Name=WP_014614549.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=CYJ01_RS04855;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_014614549.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 9335 10048 . + . ID=gene-CYJ01_RS04860;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CYJ01_RS04860;old_locus_tag=CYJ01_04860 NZ_PJUR01000009.1 Protein Homology CDS 9335 10048 . + 0 ID=cds-WP_014614550.1;Parent=gene-CYJ01_RS04860;Dbxref=GenBank:WP_014614550.1;Name=WP_014614550.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445901.1;locus_tag=CYJ01_RS04860;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_014614550.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 10196 10795 . + . ID=gene-CYJ01_RS04865;Name=CYJ01_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04865;old_locus_tag=CYJ01_04865 NZ_PJUR01000009.1 Protein Homology CDS 10196 10795 . + 0 ID=cds-WP_037543793.1;Parent=gene-CYJ01_RS04865;Dbxref=GenBank:WP_037543793.1;Name=WP_037543793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614551.1;locus_tag=CYJ01_RS04865;product=hypothetical protein;protein_id=WP_037543793.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 10865 11119 . + . ID=gene-CYJ01_RS04870;Name=CYJ01_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04870;old_locus_tag=CYJ01_04870 NZ_PJUR01000009.1 Protein Homology CDS 10865 11119 . + 0 ID=cds-WP_014614552.1;Parent=gene-CYJ01_RS04870;Dbxref=GenBank:WP_014614552.1;Name=WP_014614552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424461.1;locus_tag=CYJ01_RS04870;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_014614552.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 11292 12272 . - . ID=gene-CYJ01_RS04875;Name=CYJ01_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04875;old_locus_tag=CYJ01_04875 NZ_PJUR01000009.1 Protein Homology CDS 11292 12272 . - 0 ID=cds-WP_063279013.1;Parent=gene-CYJ01_RS04875;Dbxref=GenBank:WP_063279013.1;Name=WP_063279013.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=CYJ01_RS04875;product=glycosyltransferase family 2 protein;protein_id=WP_063279013.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 13089 14444 . - . ID=gene-CYJ01_RS04880;Name=CYJ01_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04880;old_locus_tag=CYJ01_04880 NZ_PJUR01000009.1 Protein Homology CDS 13089 14444 . - 0 ID=cds-WP_014614554.1;Parent=gene-CYJ01_RS04880;Dbxref=GenBank:WP_014614554.1;Name=WP_014614554.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168550.1;locus_tag=CYJ01_RS04880;product=hemolysin family protein;protein_id=WP_014614554.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 14863 16761 . - . ID=gene-CYJ01_RS04885;Name=CYJ01_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04885;old_locus_tag=CYJ01_04885 NZ_PJUR01000009.1 Protein Homology CDS 14863 16761 . - 0 ID=cds-WP_099987382.1;Parent=gene-CYJ01_RS04885;Dbxref=GenBank:WP_099987382.1;Name=WP_099987382.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168551.1;locus_tag=CYJ01_RS04885;product=PTS fructose transporter subunit IIABC;protein_id=WP_099987382.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 16763 17686 . - . ID=gene-CYJ01_RS04890;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CYJ01_RS04890;old_locus_tag=CYJ01_04890 NZ_PJUR01000009.1 Protein Homology CDS 16763 17686 . - 0 ID=cds-WP_101457329.1;Parent=gene-CYJ01_RS04890;Dbxref=GenBank:WP_101457329.1;Name=WP_101457329.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=CYJ01_RS04890;product=1-phosphofructokinase;protein_id=WP_101457329.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 17686 18438 . - . ID=gene-CYJ01_RS04895;Name=CYJ01_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04895;old_locus_tag=CYJ01_04895 NZ_PJUR01000009.1 Protein Homology CDS 17686 18438 . - 0 ID=cds-WP_014614557.1;Parent=gene-CYJ01_RS04895;Dbxref=GenBank:WP_014614557.1;Name=WP_014614557.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614557.1;locus_tag=CYJ01_RS04895;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014614557.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 18691 18909 . + . ID=gene-CYJ01_RS04900;Name=CYJ01_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04900;old_locus_tag=CYJ01_04900 NZ_PJUR01000009.1 Protein Homology CDS 18691 18909 . + 0 ID=cds-WP_241900528.1;Parent=gene-CYJ01_RS04900;Dbxref=GenBank:WP_241900528.1;Name=WP_241900528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614558.1;locus_tag=CYJ01_RS04900;product=DUF6007 family protein;protein_id=WP_241900528.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 19021 19224 . + . ID=gene-CYJ01_RS04905;Name=CYJ01_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04905;old_locus_tag=CYJ01_04905 NZ_PJUR01000009.1 Protein Homology CDS 19021 19224 . + 0 ID=cds-WP_037543799.1;Parent=gene-CYJ01_RS04905;Dbxref=GenBank:WP_037543799.1;Name=WP_037543799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614559.1;locus_tag=CYJ01_RS04905;product=hypothetical protein;protein_id=WP_037543799.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 19270 19449 . - . ID=gene-CYJ01_RS04910;Name=CYJ01_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04910;old_locus_tag=CYJ01_04910 NZ_PJUR01000009.1 Protein Homology CDS 19270 19449 . - 0 ID=cds-WP_101457342.1;Parent=gene-CYJ01_RS04910;Dbxref=GenBank:WP_101457342.1;Name=WP_101457342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166167.1;locus_tag=CYJ01_RS04910;product=VraH family peptide resistance protein;protein_id=WP_101457342.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 19599 20078 . - . ID=gene-CYJ01_RS04915;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CYJ01_RS04915;old_locus_tag=CYJ01_04915 NZ_PJUR01000009.1 Protein Homology CDS 19599 20078 . - 0 ID=cds-WP_014614561.1;Parent=gene-CYJ01_RS04915;Dbxref=GenBank:WP_014614561.1;Name=WP_014614561.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614561.1;locus_tag=CYJ01_RS04915;product=Cys-tRNA(Pro) deacylase;protein_id=WP_014614561.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 20101 22425 . - . ID=gene-CYJ01_RS04920;Name=CYJ01_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04920;old_locus_tag=CYJ01_04920 NZ_PJUR01000009.1 Protein Homology CDS 20101 22425 . - 0 ID=cds-WP_063284907.1;Parent=gene-CYJ01_RS04920;Dbxref=GenBank:WP_063284907.1;Name=WP_063284907.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=CYJ01_RS04920;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_063284907.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 22563 23729 . - . ID=gene-CYJ01_RS04925;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04925;old_locus_tag=CYJ01_04925 NZ_PJUR01000009.1 Protein Homology CDS 22563 23729 . - 0 ID=cds-WP_100006809.1;Parent=gene-CYJ01_RS04925;Dbxref=GenBank:WP_100006809.1;Name=WP_100006809.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=CYJ01_RS04925;product=multidrug efflux MFS transporter NorA;protein_id=WP_100006809.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 24047 24664 . + . ID=gene-CYJ01_RS04930;Name=CYJ01_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04930;old_locus_tag=CYJ01_04930 NZ_PJUR01000009.1 Protein Homology CDS 24047 24664 . + 0 ID=cds-WP_020219822.1;Parent=gene-CYJ01_RS04930;Dbxref=GenBank:WP_020219822.1;Name=WP_020219822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=CYJ01_RS04930;product=DUF1361 domain-containing protein;protein_id=WP_020219822.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 24974 25678 . + . ID=gene-CYJ01_RS04940;Name=CYJ01_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04940;old_locus_tag=CYJ01_04940 NZ_PJUR01000009.1 Protein Homology CDS 24974 25678 . + 0 ID=cds-WP_225549916.1;Parent=gene-CYJ01_RS04940;Dbxref=GenBank:WP_225549916.1;Name=WP_225549916.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166173.1;locus_tag=CYJ01_RS04940;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_225549916.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 25809 26747 . - . ID=gene-CYJ01_RS04945;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CYJ01_RS04945;old_locus_tag=CYJ01_04945 NZ_PJUR01000009.1 Protein Homology CDS 25809 26747 . - 0 ID=cds-WP_014614567.1;Parent=gene-CYJ01_RS04945;Dbxref=GenBank:WP_014614567.1;Name=WP_014614567.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=CYJ01_RS04945;product=malate dehydrogenase;protein_id=WP_014614567.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 27135 27716 . - . ID=gene-CYJ01_RS04950;Name=CYJ01_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04950;old_locus_tag=CYJ01_04950 NZ_PJUR01000009.1 Protein Homology CDS 27135 27716 . - 0 ID=cds-WP_133121611.1;Parent=gene-CYJ01_RS04950;Dbxref=GenBank:WP_133121611.1;Name=WP_133121611.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.7;locus_tag=CYJ01_RS04950;product=AAA family ATPase;protein_id=WP_133121611.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 27775 27981 . - . ID=gene-CYJ01_RS04955;Name=CYJ01_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04955;old_locus_tag=CYJ01_04955 NZ_PJUR01000009.1 GeneMarkS-2+ CDS 27775 27981 . - 0 ID=cds-WP_096535848.1;Parent=gene-CYJ01_RS04955;Dbxref=GenBank:WP_096535848.1;Name=WP_096535848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS04955;product=hypothetical protein;protein_id=WP_096535848.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 28181 28303 . - . ID=gene-CYJ01_RS12490;Name=CYJ01_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS12490 NZ_PJUR01000009.1 Protein Homology CDS 28181 28303 . - 0 ID=cds-WP_157929451.1;Parent=gene-CYJ01_RS12490;Dbxref=GenBank:WP_157929451.1;Name=WP_157929451.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.7;locus_tag=CYJ01_RS12490;product=AAA family ATPase;protein_id=WP_157929451.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 28650 28931 . - . ID=gene-CYJ01_RS04960;Name=CYJ01_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04960;old_locus_tag=CYJ01_04960 NZ_PJUR01000009.1 Protein Homology CDS 28650 28931 . - 0 ID=cds-WP_014614570.1;Parent=gene-CYJ01_RS04960;Dbxref=GenBank:WP_014614570.1;Name=WP_014614570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=CYJ01_RS04960;product=hypothetical protein;protein_id=WP_014614570.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 29014 29922 . - . ID=gene-CYJ01_RS04965;Name=CYJ01_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04965;old_locus_tag=CYJ01_04965 NZ_PJUR01000009.1 Protein Homology CDS 29014 29922 . - 0 ID=cds-WP_015728721.1;Parent=gene-CYJ01_RS04965;Dbxref=GenBank:WP_015728721.1;Name=WP_015728721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614571.1;locus_tag=CYJ01_RS04965;product=aldo/keto reductase;protein_id=WP_015728721.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 29949 30878 . - . ID=gene-CYJ01_RS04970;Name=CYJ01_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04970;old_locus_tag=CYJ01_04970 NZ_PJUR01000009.1 Protein Homology CDS 29949 30878 . - 0 ID=cds-WP_101457332.1;Parent=gene-CYJ01_RS04970;Dbxref=GenBank:WP_101457332.1;Name=WP_101457332.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614572.1;locus_tag=CYJ01_RS04970;product=CobW family GTP-binding protein;protein_id=WP_101457332.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 31110 31547 . + . ID=gene-CYJ01_RS04975;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CYJ01_RS04975;old_locus_tag=CYJ01_04975 NZ_PJUR01000009.1 Protein Homology CDS 31110 31547 . + 0 ID=cds-WP_014614573.1;Parent=gene-CYJ01_RS04975;Dbxref=GenBank:WP_014614573.1;Name=WP_014614573.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=CYJ01_RS04975;product=global transcriptional regulator MgrA;protein_id=WP_014614573.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 31933 33594 . - . ID=gene-CYJ01_RS04985;Name=CYJ01_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04985;old_locus_tag=CYJ01_04985 NZ_PJUR01000009.1 Protein Homology CDS 31933 33594 . - 0 ID=cds-WP_101457333.1;Parent=gene-CYJ01_RS04985;Dbxref=GenBank:WP_101457333.1;Name=WP_101457333.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=CYJ01_RS04985;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_101457333.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 33595 35232 . - . ID=gene-CYJ01_RS04990;Name=CYJ01_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04990;old_locus_tag=CYJ01_04990 NZ_PJUR01000009.1 Protein Homology CDS 33595 35232 . - 0 ID=cds-WP_014614575.1;Parent=gene-CYJ01_RS04990;Dbxref=GenBank:WP_014614575.1;Name=WP_014614575.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614575.1;locus_tag=CYJ01_RS04990;product=ABC transporter ATP-binding protein/permease;protein_id=WP_014614575.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 35511 36365 . + . ID=gene-CYJ01_RS04995;Name=CYJ01_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS04995;old_locus_tag=CYJ01_04995 NZ_PJUR01000009.1 Protein Homology CDS 35511 36365 . + 0 ID=cds-WP_037543807.1;Parent=gene-CYJ01_RS04995;Dbxref=GenBank:WP_037543807.1;Name=WP_037543807.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=CYJ01_RS04995;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_037543807.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 36749 37738 . + . ID=gene-CYJ01_RS05000;Name=CYJ01_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05000;old_locus_tag=CYJ01_05000 NZ_PJUR01000009.1 Protein Homology CDS 36749 37738 . + 0 ID=cds-WP_101457334.1;Parent=gene-CYJ01_RS05000;Dbxref=GenBank:WP_101457334.1;Name=WP_101457334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614577.1;locus_tag=CYJ01_RS05000;product=hypothetical protein;protein_id=WP_101457334.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 37739 38185 . + . ID=gene-CYJ01_RS05005;Name=CYJ01_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05005;old_locus_tag=CYJ01_05005 NZ_PJUR01000009.1 Protein Homology CDS 37739 38185 . + 0 ID=cds-WP_014614578.1;Parent=gene-CYJ01_RS05005;Dbxref=GenBank:WP_014614578.1;Name=WP_014614578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166183.1;locus_tag=CYJ01_RS05005;product=YaiI/YqxD family protein;protein_id=WP_014614578.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 38286 38852 . + . ID=gene-CYJ01_RS05010;Name=CYJ01_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05010;old_locus_tag=CYJ01_05010 NZ_PJUR01000009.1 Protein Homology CDS 38286 38852 . + 0 ID=cds-WP_031253776.1;Parent=gene-CYJ01_RS05010;Dbxref=GenBank:WP_031253776.1;Name=WP_031253776.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=CYJ01_RS05010;product=LOG family protein;protein_id=WP_031253776.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 39663 40211 . - . ID=gene-CYJ01_RS05015;Name=CYJ01_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05015;old_locus_tag=CYJ01_05015 NZ_PJUR01000009.1 Protein Homology CDS 39663 40211 . - 0 ID=cds-WP_014614580.1;Parent=gene-CYJ01_RS05015;Dbxref=GenBank:WP_014614580.1;Name=WP_014614580.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614580.1;locus_tag=CYJ01_RS05015;product=GNAT family N-acetyltransferase;protein_id=WP_014614580.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 40421 40720 . - . ID=gene-CYJ01_RS05020;Name=CYJ01_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05020;old_locus_tag=CYJ01_05020 NZ_PJUR01000009.1 Protein Homology CDS 40421 40720 . - 0 ID=cds-WP_014614581.1;Parent=gene-CYJ01_RS05020;Dbxref=GenBank:WP_014614581.1;Name=WP_014614581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=CYJ01_RS05020;product=hypothetical protein;protein_id=WP_014614581.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 40843 41178 . - . ID=gene-CYJ01_RS05025;Name=CYJ01_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05025;old_locus_tag=CYJ01_05025 NZ_PJUR01000009.1 Protein Homology CDS 40843 41178 . - 0 ID=cds-WP_037543809.1;Parent=gene-CYJ01_RS05025;Dbxref=GenBank:WP_037543809.1;Name=WP_037543809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614582.1;locus_tag=CYJ01_RS05025;product=SA0632 family lipoprotein;protein_id=WP_037543809.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 41248 41703 . - . ID=gene-CYJ01_RS05030;Name=CYJ01_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05030;old_locus_tag=CYJ01_05030 NZ_PJUR01000009.1 Protein Homology CDS 41248 41703 . - 0 ID=cds-WP_014614583.1;Parent=gene-CYJ01_RS05030;Dbxref=GenBank:WP_014614583.1;Name=WP_014614583.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166188.1;locus_tag=CYJ01_RS05030;product=GNAT family N-acetyltransferase;protein_id=WP_014614583.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 41802 42485 . + . ID=gene-CYJ01_RS05035;Name=CYJ01_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05035;old_locus_tag=CYJ01_05035 NZ_PJUR01000009.1 Protein Homology CDS 41802 42485 . + 0 ID=cds-WP_014614584.1;Parent=gene-CYJ01_RS05035;Dbxref=GenBank:WP_014614584.1;Name=WP_014614584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=CYJ01_RS05035;product=DUF1129 family protein;protein_id=WP_014614584.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 42570 43061 . - . ID=gene-CYJ01_RS05040;Name=CYJ01_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05040;old_locus_tag=CYJ01_05040 NZ_PJUR01000009.1 Protein Homology CDS 42570 43061 . - 0 ID=cds-WP_015728715.1;Parent=gene-CYJ01_RS05040;Dbxref=GenBank:WP_015728715.1;Name=WP_015728715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168579.1;locus_tag=CYJ01_RS05040;product=DUF456 domain-containing protein;protein_id=WP_015728715.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 43083 44288 . - . ID=gene-CYJ01_RS05045;Name=CYJ01_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05045;old_locus_tag=CYJ01_05045 NZ_PJUR01000009.1 Protein Homology CDS 43083 44288 . - 0 ID=cds-WP_037543811.1;Parent=gene-CYJ01_RS05045;Dbxref=GenBank:WP_037543811.1;Name=WP_037543811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166191.1;locus_tag=CYJ01_RS05045;product=sugar efflux transporter;protein_id=WP_037543811.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 44368 45237 . - . ID=gene-CYJ01_RS05050;Name=CYJ01_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05050;old_locus_tag=CYJ01_05050 NZ_PJUR01000009.1 Protein Homology CDS 44368 45237 . - 0 ID=cds-WP_014614587.1;Parent=gene-CYJ01_RS05050;Dbxref=GenBank:WP_014614587.1;Name=WP_014614587.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614587.1;locus_tag=CYJ01_RS05050;product=LysR family transcriptional regulator;protein_id=WP_014614587.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 45326 45922 . - . ID=gene-CYJ01_RS05055;Name=CYJ01_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05055;old_locus_tag=CYJ01_05055 NZ_PJUR01000009.1 Protein Homology CDS 45326 45922 . - 0 ID=cds-WP_014614588.1;Parent=gene-CYJ01_RS05055;Dbxref=GenBank:WP_014614588.1;Name=WP_014614588.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=CYJ01_RS05055;product=ribonuclease FAU-1 family protein;protein_id=WP_014614588.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 46245 46724 . - . ID=gene-CYJ01_RS05060;Name=CYJ01_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05060;old_locus_tag=CYJ01_05060 NZ_PJUR01000009.1 Protein Homology CDS 46245 46724 . - 0 ID=cds-WP_015728712.1;Parent=gene-CYJ01_RS05060;Dbxref=GenBank:WP_015728712.1;Name=WP_015728712.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728712.1;locus_tag=CYJ01_RS05060;product=cupin domain-containing protein;protein_id=WP_015728712.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 46743 47459 . - . ID=gene-CYJ01_RS05065;Name=CYJ01_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05065;old_locus_tag=CYJ01_05065 NZ_PJUR01000009.1 Protein Homology CDS 46743 47459 . - 0 ID=cds-WP_014614590.1;Parent=gene-CYJ01_RS05065;Dbxref=GenBank:WP_014614590.1;Name=WP_014614590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383182.1;locus_tag=CYJ01_RS05065;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_014614590.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 47535 48539 . - . ID=gene-CYJ01_RS05070;Name=CYJ01_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05070;old_locus_tag=CYJ01_05070 NZ_PJUR01000009.1 Protein Homology CDS 47535 48539 . - 0 ID=cds-WP_014614591.1;Parent=gene-CYJ01_RS05070;Dbxref=GenBank:WP_014614591.1;Name=WP_014614591.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=CYJ01_RS05070;product=ThiF family adenylyltransferase;protein_id=WP_014614591.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 48539 49306 . - . ID=gene-CYJ01_RS05075;Name=CYJ01_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05075;old_locus_tag=CYJ01_05075 NZ_PJUR01000009.1 Protein Homology CDS 48539 49306 . - 0 ID=cds-WP_015728710.1;Parent=gene-CYJ01_RS05075;Dbxref=GenBank:WP_015728710.1;Name=WP_015728710.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=CYJ01_RS05075;product=thiazole synthase;protein_id=WP_015728710.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 49310 49510 . - . ID=gene-CYJ01_RS05080;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CYJ01_RS05080;old_locus_tag=CYJ01_05080 NZ_PJUR01000009.1 Protein Homology CDS 49310 49510 . - 0 ID=cds-WP_014614593.1;Parent=gene-CYJ01_RS05080;Dbxref=GenBank:WP_014614593.1;Name=WP_014614593.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614593.1;locus_tag=CYJ01_RS05080;product=sulfur carrier protein ThiS;protein_id=WP_014614593.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 49511 50101 . - . ID=gene-CYJ01_RS05085;Name=CYJ01_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05085;old_locus_tag=CYJ01_05085 NZ_PJUR01000009.1 Protein Homology CDS 49511 50101 . - 0 ID=cds-WP_063278885.1;Parent=gene-CYJ01_RS05085;Dbxref=GenBank:WP_063278885.1;Name=WP_063278885.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728709.1;locus_tag=CYJ01_RS05085;product=thiamine phosphate synthase;protein_id=WP_063278885.1;transl_table=11 NZ_PJUR01000009.1 cmsearch riboswitch 50179 50287 . - . ID=id-NZ_PJUR01000009.1:50179..50287;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUR01000009.1 RefSeq gene 50306 50926 . - . ID=gene-CYJ01_RS05090;Name=CYJ01_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05090;old_locus_tag=CYJ01_05090 NZ_PJUR01000009.1 Protein Homology CDS 50306 50926 . - 0 ID=cds-WP_063278884.1;Parent=gene-CYJ01_RS05090;Dbxref=GenBank:WP_063278884.1;Name=WP_063278884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166200.1;locus_tag=CYJ01_RS05090;product=Bax inhibitor-1/YccA family protein;protein_id=WP_063278884.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 51267 52094 . + . ID=gene-CYJ01_RS05095;Name=CYJ01_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05095;old_locus_tag=CYJ01_05095 NZ_PJUR01000009.1 Protein Homology CDS 51267 52094 . + 0 ID=cds-WP_014614596.1;Parent=gene-CYJ01_RS05095;Dbxref=GenBank:WP_014614596.1;Name=WP_014614596.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166201.1;locus_tag=CYJ01_RS05095;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614596.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 52353 53354 . - . ID=gene-CYJ01_RS05100;Name=CYJ01_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05100;old_locus_tag=CYJ01_05100 NZ_PJUR01000009.1 Protein Homology CDS 52353 53354 . - 0 ID=cds-WP_096538011.1;Parent=gene-CYJ01_RS05100;Dbxref=GenBank:WP_096538011.1;Name=WP_096538011.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=CYJ01_RS05100;product=inorganic phosphate transporter;protein_id=WP_096538011.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 53369 53986 . - . ID=gene-CYJ01_RS05105;Name=CYJ01_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05105;old_locus_tag=CYJ01_05105 NZ_PJUR01000009.1 Protein Homology CDS 53369 53986 . - 0 ID=cds-WP_014614598.1;Parent=gene-CYJ01_RS05105;Dbxref=GenBank:WP_014614598.1;Name=WP_014614598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=CYJ01_RS05105;product=DUF47 domain-containing protein;protein_id=WP_014614598.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 54740 56638 . - . ID=gene-CYJ01_RS05110;Name=CYJ01_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05110;old_locus_tag=CYJ01_05110 NZ_PJUR01000009.1 Protein Homology CDS 54740 56638 . - 0 ID=cds-WP_101457335.1;Parent=gene-CYJ01_RS05110;Dbxref=GenBank:WP_101457335.1;Name=WP_101457335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614599.1;locus_tag=CYJ01_RS05110;product=FtsX-like permease family protein;protein_id=WP_101457335.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 56628 57389 . - . ID=gene-CYJ01_RS05115;Name=CYJ01_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05115;old_locus_tag=CYJ01_05115 NZ_PJUR01000009.1 Protein Homology CDS 56628 57389 . - 0 ID=cds-WP_014614600.1;Parent=gene-CYJ01_RS05115;Dbxref=GenBank:WP_014614600.1;Name=WP_014614600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166204.1;locus_tag=CYJ01_RS05115;product=ABC transporter ATP-binding protein;protein_id=WP_014614600.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 57495 58517 . - . ID=gene-CYJ01_RS05120;Name=CYJ01_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05120;old_locus_tag=CYJ01_05120 NZ_PJUR01000009.1 Protein Homology CDS 57495 58517 . - 0 ID=cds-WP_014614601.1;Parent=gene-CYJ01_RS05120;Dbxref=GenBank:WP_014614601.1;Name=WP_014614601.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614601.1;locus_tag=CYJ01_RS05120;product=sensor histidine kinase;protein_id=WP_014614601.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 58504 59184 . - . ID=gene-CYJ01_RS05125;Name=CYJ01_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05125;old_locus_tag=CYJ01_05125 NZ_PJUR01000009.1 Protein Homology CDS 58504 59184 . - 0 ID=cds-WP_014614602.1;Parent=gene-CYJ01_RS05125;Dbxref=GenBank:WP_014614602.1;Name=WP_014614602.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614602.1;locus_tag=CYJ01_RS05125;product=response regulator transcription factor;protein_id=WP_014614602.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 59190 60110 . - . ID=gene-CYJ01_RS05130;Name=CYJ01_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05130;old_locus_tag=CYJ01_05130 NZ_PJUR01000009.1 Protein Homology CDS 59190 60110 . - 0 ID=cds-WP_101457336.1;Parent=gene-CYJ01_RS05130;Dbxref=GenBank:WP_101457336.1;Name=WP_101457336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614603.1;locus_tag=CYJ01_RS05130;product=NAD(P)H-binding protein;protein_id=WP_101457336.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 60271 60792 . + . ID=gene-CYJ01_RS05135;Name=CYJ01_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05135;old_locus_tag=CYJ01_05135 NZ_PJUR01000009.1 Protein Homology CDS 60271 60792 . + 0 ID=cds-WP_020220153.1;Parent=gene-CYJ01_RS05135;Dbxref=GenBank:WP_020220153.1;Name=WP_020220153.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=CYJ01_RS05135;product=GNAT family N-acetyltransferase;protein_id=WP_020220153.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 61057 62082 . - . ID=gene-CYJ01_RS05140;Name=CYJ01_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05140;old_locus_tag=CYJ01_05140 NZ_PJUR01000009.1 Protein Homology CDS 61057 62082 . - 0 ID=cds-WP_014614605.1;Parent=gene-CYJ01_RS05140;Dbxref=GenBank:WP_014614605.1;Name=WP_014614605.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=CYJ01_RS05140;product=alpha/beta hydrolase;protein_id=WP_014614605.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 62125 63192 . - . ID=gene-CYJ01_RS05145;Name=CYJ01_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05145;old_locus_tag=CYJ01_05145 NZ_PJUR01000009.1 Protein Homology CDS 62125 63192 . - 0 ID=cds-WP_020220154.1;Parent=gene-CYJ01_RS05145;Dbxref=GenBank:WP_020220154.1;Name=WP_020220154.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=CYJ01_RS05145;product=YkvI family membrane protein;protein_id=WP_020220154.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 63699 65147 . - . ID=gene-CYJ01_RS05150;Name=CYJ01_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05150;old_locus_tag=CYJ01_05150 NZ_PJUR01000009.1 Protein Homology CDS 63699 65147 . - 0 ID=cds-WP_014614607.1;Parent=gene-CYJ01_RS05150;Dbxref=GenBank:WP_014614607.1;Name=WP_014614607.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614607.1;locus_tag=CYJ01_RS05150;product=MDR family MFS transporter;protein_id=WP_014614607.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 65432 65929 . - . ID=gene-CYJ01_RS05155;Name=CYJ01_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05155;old_locus_tag=CYJ01_05155 NZ_PJUR01000009.1 Protein Homology CDS 65432 65929 . - 0 ID=cds-WP_014614608.1;Parent=gene-CYJ01_RS05155;Dbxref=GenBank:WP_014614608.1;Name=WP_014614608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614608.1;locus_tag=CYJ01_RS05155;product=hypothetical protein;protein_id=WP_014614608.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 66096 67112 . - . ID=gene-CYJ01_RS05160;Name=CYJ01_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05160;old_locus_tag=CYJ01_05160 NZ_PJUR01000009.1 Protein Homology CDS 66096 67112 . - 0 ID=cds-WP_014614609.1;Parent=gene-CYJ01_RS05160;Dbxref=GenBank:WP_014614609.1;Name=WP_014614609.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=CYJ01_RS05160;product=FecCD family ABC transporter permease;protein_id=WP_014614609.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 67109 68113 . - . ID=gene-CYJ01_RS05165;Name=CYJ01_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05165;old_locus_tag=CYJ01_05165 NZ_PJUR01000009.1 Protein Homology CDS 67109 68113 . - 0 ID=cds-WP_101457337.1;Parent=gene-CYJ01_RS05165;Dbxref=GenBank:WP_101457337.1;Name=WP_101457337.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168605.1;locus_tag=CYJ01_RS05165;product=FecCD family ABC transporter permease;protein_id=WP_101457337.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 68139 68942 . - . ID=gene-CYJ01_RS05170;Name=CYJ01_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05170;old_locus_tag=CYJ01_05170 NZ_PJUR01000009.1 Protein Homology CDS 68139 68942 . - 0 ID=cds-WP_014614611.1;Parent=gene-CYJ01_RS05170;Dbxref=GenBank:WP_014614611.1;Name=WP_014614611.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166215.1;locus_tag=CYJ01_RS05170;product=ABC transporter ATP-binding protein;protein_id=WP_014614611.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 69309 70142 . - . ID=gene-CYJ01_RS05175;Name=CYJ01_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05175;old_locus_tag=CYJ01_05175 NZ_PJUR01000009.1 Protein Homology CDS 69309 70142 . - 0 ID=cds-WP_096636579.1;Parent=gene-CYJ01_RS05175;Dbxref=GenBank:WP_096636579.1;Name=WP_096636579.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=CYJ01_RS05175;product=YitT family protein;protein_id=WP_096636579.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 70616 71842 . - . ID=gene-CYJ01_RS05180;Name=CYJ01_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05180;old_locus_tag=CYJ01_05180 NZ_PJUR01000009.1 Protein Homology CDS 70616 71842 . - 0 ID=cds-WP_020220157.1;Parent=gene-CYJ01_RS05180;Dbxref=GenBank:WP_020220157.1;Name=WP_020220157.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=CYJ01_RS05180;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_020220157.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 72118 72354 . + . ID=gene-CYJ01_RS05185;Name=CYJ01_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05185;old_locus_tag=CYJ01_05185 NZ_PJUR01000009.1 Protein Homology CDS 72118 72354 . + 0 ID=cds-WP_014614614.1;Parent=gene-CYJ01_RS05185;Dbxref=GenBank:WP_014614614.1;Name=WP_014614614.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=CYJ01_RS05185;product=FeoA family protein;protein_id=WP_014614614.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 72347 74341 . + . ID=gene-CYJ01_RS05190;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CYJ01_RS05190;old_locus_tag=CYJ01_05190 NZ_PJUR01000009.1 Protein Homology CDS 72347 74341 . + 0 ID=cds-WP_101457338.1;Parent=gene-CYJ01_RS05190;Dbxref=GenBank:WP_101457338.1;Name=WP_101457338.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728703.1;locus_tag=CYJ01_RS05190;product=ferrous iron transport protein B;protein_id=WP_101457338.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 74354 74512 . + . ID=gene-CYJ01_RS05195;Name=CYJ01_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05195;old_locus_tag=CYJ01_05195 NZ_PJUR01000009.1 Protein Homology CDS 74354 74512 . + 0 ID=cds-WP_014614616.1;Parent=gene-CYJ01_RS05195;Dbxref=GenBank:WP_014614616.1;Name=WP_014614616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166220.1;locus_tag=CYJ01_RS05195;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_014614616.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 74670 76424 . - . ID=gene-CYJ01_RS05200;Name=CYJ01_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05200;old_locus_tag=CYJ01_05200 NZ_PJUR01000009.1 Protein Homology CDS 74670 76424 . - 0 ID=cds-WP_101457339.1;Parent=gene-CYJ01_RS05200;Dbxref=GenBank:WP_101457339.1;Name=WP_101457339.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=CYJ01_RS05200;product=ABC transporter ATP-binding protein;protein_id=WP_101457339.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 76699 77976 . + . ID=gene-CYJ01_RS05205;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=CYJ01_RS05205;old_locus_tag=CYJ01_05205 NZ_PJUR01000009.1 Protein Homology CDS 76699 77976 . + 0 ID=cds-WP_101457340.1;Parent=gene-CYJ01_RS05205;Dbxref=GenBank:WP_101457340.1;Name=WP_101457340.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166222.1;locus_tag=CYJ01_RS05205;product=penicillin-binding protein PBP4;protein_id=WP_101457340.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 78638 79840 . - . ID=gene-CYJ01_RS05210;Name=CYJ01_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05210;old_locus_tag=CYJ01_05210 NZ_PJUR01000009.1 Protein Homology CDS 78638 79840 . - 0 ID=cds-WP_101457341.1;Parent=gene-CYJ01_RS05210;Dbxref=GenBank:WP_101457341.1;Name=WP_101457341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728701.1;locus_tag=CYJ01_RS05210;product=MFS transporter;protein_id=WP_101457341.1;transl_table=11 NZ_PJUR01000009.1 RefSeq gene 79840 80050 . - . ID=gene-CYJ01_RS05215;Name=CYJ01_RS05215;end_range=80050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS05215;old_locus_tag=CYJ01_05215;partial=true NZ_PJUR01000009.1 GeneMarkS-2+ CDS 79840 80050 . - 1 ID=cds-WP_241900529.1;Parent=gene-CYJ01_RS05215;Dbxref=GenBank:WP_241900529.1;Name=WP_241900529.1;end_range=80050,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS05215;partial=true;product=hypothetical protein;protein_id=WP_241900529.1;transl_table=11 ##sequence-region NZ_PJUR01000088.1 1 886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000088.1 RefSeq region 1 886 . + . ID=NZ_PJUR01000088.1:1..886;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000088.1 RefSeq gene 1 705 . - . ID=gene-CYJ01_RS11895;Name=CYJ01_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11895;old_locus_tag=CYJ01_11905;partial=true;start_range=.,1 NZ_PJUR01000088.1 Protein Homology CDS 1 705 . - 0 ID=cds-WP_198588005.1;Parent=gene-CYJ01_RS11895;Dbxref=GenBank:WP_198588005.1;Name=WP_198588005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.7;locus_tag=CYJ01_RS11895;partial=true;product=alanine racemase;protein_id=WP_198588005.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000089.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000089.1 RefSeq region 1 742 . + . ID=NZ_PJUR01000089.1:1..742;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000089.1 RefSeq direct_repeat 74 705 . + . ID=id-NZ_PJUR01000089.1:74..705;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=74..109;rpt_unit_seq=gtatcacttatacctaatttgacagagtactaaaac ##sequence-region NZ_PJUR01000090.1 1 223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000090.1 RefSeq region 1 223 . + . ID=NZ_PJUR01000090.1:1..223;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000090.1 RefSeq pseudogene 1 223 . - . ID=gene-CYJ01_RS12050;Name=CYJ01_RS12050;end_range=223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12050;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000090.1 Protein Homology CDS 1 223 . - 2 ID=cds-CYJ01_RS12050;Parent=gene-CYJ01_RS12050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220337.1;locus_tag=CYJ01_RS12050;partial=true;product=MSCRAMM family adhesin SdrC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000091.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000091.1 RefSeq region 1 231 . + . ID=NZ_PJUR01000091.1:1..231;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000091.1 RefSeq pseudogene 1 231 . + . ID=gene-CYJ01_RS12055;Name=CYJ01_RS12055;end_range=231,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12055;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000091.1 Protein Homology CDS 1 231 . + 1 ID=cds-CYJ01_RS12055;Parent=gene-CYJ01_RS12055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220337.1;locus_tag=CYJ01_RS12055;partial=true;product=MSCRAMM family adhesin SdrC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000092.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000092.1 RefSeq region 1 233 . + . ID=NZ_PJUR01000092.1:1..233;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000092.1 RefSeq pseudogene 1 233 . - . ID=gene-CYJ01_RS12440;Name=CYJ01_RS12440;end_range=233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ01_RS12440;partial=true;pseudo=true;start_range=.,1 NZ_PJUR01000092.1 Protein Homology CDS 1 233 . - 1 ID=cds-CYJ01_RS12440;Parent=gene-CYJ01_RS12440;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ01_RS12440;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUR01000093.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000093.1 RefSeq region 1 329 . + . ID=NZ_PJUR01000093.1:1..329;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000093.1 RefSeq gene 49 228 . + . ID=gene-CYJ01_RS11915;Name=CYJ01_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ01_RS11915;old_locus_tag=CYJ01_11925 NZ_PJUR01000093.1 GeneMarkS-2+ CDS 49 228 . + 0 ID=cds-WP_101457598.1;Parent=gene-CYJ01_RS11915;Dbxref=GenBank:WP_101457598.1;Name=WP_101457598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ01_RS11915;product=hypothetical protein;protein_id=WP_101457598.1;transl_table=11 ##sequence-region NZ_PJUR01000094.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUR01000094.1 RefSeq region 1 268 . + . ID=NZ_PJUR01000094.1:1..268;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=113N NZ_PJUR01000094.1 RefSeq gene 112 188 . + . ID=gene-CYJ01_RS11920;Name=CYJ01_RS11920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ01_RS11920;old_locus_tag=CYJ01_11930 NZ_PJUR01000094.1 tRNAscan-SE tRNA 112 188 . + . ID=rna-CYJ01_RS11920;Parent=gene-CYJ01_RS11920;anticodon=(pos:146..148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11920;product=tRNA-Ile NZ_PJUR01000094.1 tRNAscan-SE exon 112 188 . + . ID=exon-CYJ01_RS11920-1;Parent=rna-CYJ01_RS11920;anticodon=(pos:146..148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ01_RS11920;product=tRNA-Ile ###