##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM284720v2
#!genome-build-accession NCBI_Assembly:GCF_002847205.2
#!annotation-date 06/14/2026 18:43:34
#!annotation-source NCBI RefSeq GCF_002847205.2-RS_2026_06_14
##sequence-region NZ_PJUS02000149.1 1 40963
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000149.1	RefSeq	region	1	40963	.	+	.	ID=NZ_PJUS02000149.1:1..40963;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000149.1	RefSeq	gene	387	866	.	-	.	ID=gene-CYJ00_RS04040;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CYJ00_RS04040;old_locus_tag=CYJ00_004045
NZ_PJUS02000149.1	Protein Homology	CDS	387	866	.	-	0	ID=cds-WP_037542001.1;Parent=gene-CYJ00_RS04040;Dbxref=GenBank:WP_037542001.1;Name=WP_037542001.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CYJ00_RS04040;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_037542001.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	1578	2360	.	-	.	ID=gene-CYJ00_RS04045;Name=CYJ00_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04045;old_locus_tag=CYJ00_004050
NZ_PJUS02000149.1	Protein Homology	CDS	1578	2360	.	-	0	ID=cds-WP_101457636.1;Parent=gene-CYJ00_RS04045;Dbxref=GenBank:WP_101457636.1;Name=WP_101457636.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=CYJ00_RS04045;product=MBL fold metallo-hydrolase;protein_id=WP_101457636.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	2383	3162	.	-	.	ID=gene-CYJ00_RS04050;Name=CYJ00_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04050;old_locus_tag=CYJ00_004055
NZ_PJUS02000149.1	Protein Homology	CDS	2383	3162	.	-	0	ID=cds-WP_014612684.1;Parent=gene-CYJ00_RS04050;Dbxref=GenBank:WP_014612684.1;Name=WP_014612684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=CYJ00_RS04050;product=two-component system regulatory protein YycI;protein_id=WP_014612684.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	3159	4496	.	-	.	ID=gene-CYJ00_RS04055;Name=CYJ00_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04055;old_locus_tag=CYJ00_004060
NZ_PJUS02000149.1	Protein Homology	CDS	3159	4496	.	-	0	ID=cds-WP_101431574.1;Parent=gene-CYJ00_RS04055;Dbxref=GenBank:WP_101431574.1;Name=WP_101431574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=CYJ00_RS04055;product=YycH family regulatory protein;protein_id=WP_101431574.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	4486	6318	.	-	.	ID=gene-CYJ00_RS04060;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=CYJ00_RS04060;old_locus_tag=CYJ00_004065
NZ_PJUS02000149.1	Protein Homology	CDS	4486	6318	.	-	0	ID=cds-WP_015729822.1;Parent=gene-CYJ00_RS04060;Dbxref=GenBank:WP_015729822.1;Name=WP_015729822.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612682.1;locus_tag=CYJ00_RS04060;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_015729822.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	6331	7032	.	-	.	ID=gene-CYJ00_RS04065;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=CYJ00_RS04065;old_locus_tag=CYJ00_004070
NZ_PJUS02000149.1	Protein Homology	CDS	6331	7032	.	-	0	ID=cds-WP_014612681.1;Parent=gene-CYJ00_RS04065;Dbxref=GenBank:WP_014612681.1;Name=WP_014612681.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=CYJ00_RS04065;product=response regulator YycF;protein_id=WP_014612681.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	7183	7521	.	-	.	ID=gene-CYJ00_RS04070;Name=CYJ00_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04070;old_locus_tag=CYJ00_004075
NZ_PJUS02000149.1	Protein Homology	CDS	7183	7521	.	-	0	ID=cds-WP_014612680.1;Parent=gene-CYJ00_RS04070;Dbxref=GenBank:WP_014612680.1;Name=WP_014612680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729823.1;locus_tag=CYJ00_RS04070;product=SdpI family protein;protein_id=WP_014612680.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	7960	8033	.	-	.	ID=gene-CYJ00_RS04075;Name=CYJ00_RS04075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS04075;old_locus_tag=CYJ00_004080
NZ_PJUS02000149.1	tRNAscan-SE	tRNA	7960	8033	.	-	.	ID=rna-CYJ00_RS04075;Parent=gene-CYJ00_RS04075;anticodon=(pos:complement(7997..7999));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS04075;product=tRNA-Asp
NZ_PJUS02000149.1	tRNAscan-SE	exon	7960	8033	.	-	.	ID=exon-CYJ00_RS04075-1;Parent=rna-CYJ00_RS04075;anticodon=(pos:complement(7997..7999));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS04075;product=tRNA-Asp
NZ_PJUS02000149.1	RefSeq	gene	8040	8114	.	-	.	ID=gene-CYJ00_RS04080;Name=CYJ00_RS04080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS04080;old_locus_tag=CYJ00_004085
NZ_PJUS02000149.1	tRNAscan-SE	tRNA	8040	8114	.	-	.	ID=rna-CYJ00_RS04080;Parent=gene-CYJ00_RS04080;anticodon=(pos:complement(8079..8081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS04080;product=tRNA-Glu
NZ_PJUS02000149.1	tRNAscan-SE	exon	8040	8114	.	-	.	ID=exon-CYJ00_RS04080-1;Parent=rna-CYJ00_RS04080;anticodon=(pos:complement(8079..8081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS04080;product=tRNA-Glu
NZ_PJUS02000149.1	RefSeq	gene	8221	9114	.	+	.	ID=gene-CYJ00_RS04085;Name=CYJ00_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04085;old_locus_tag=CYJ00_004090
NZ_PJUS02000149.1	Protein Homology	CDS	8221	9114	.	+	0	ID=cds-WP_096548378.1;Parent=gene-CYJ00_RS04085;Dbxref=GenBank:WP_096548378.1;Name=WP_096548378.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729824.1;locus_tag=CYJ00_RS04085;product=YitT family protein;protein_id=WP_096548378.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	9333	10616	.	-	.	ID=gene-CYJ00_RS04090;Name=CYJ00_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04090;old_locus_tag=CYJ00_004095
NZ_PJUS02000149.1	Protein Homology	CDS	9333	10616	.	-	0	ID=cds-WP_014612678.1;Parent=gene-CYJ00_RS04090;Dbxref=GenBank:WP_014612678.1;Name=WP_014612678.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CYJ00_RS04090;product=adenylosuccinate synthase;protein_id=WP_014612678.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	10988	12388	.	-	.	ID=gene-CYJ00_RS04095;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04095;old_locus_tag=CYJ00_004100
NZ_PJUS02000149.1	Protein Homology	CDS	10988	12388	.	-	0	ID=cds-WP_014612677.1;Parent=gene-CYJ00_RS04095;Dbxref=GenBank:WP_014612677.1;Name=WP_014612677.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=CYJ00_RS04095;product=replicative DNA helicase;protein_id=WP_014612677.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	12544	12747	.	-	.	ID=gene-CYJ00_RS13560;Name=CYJ00_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13560;old_locus_tag=CYJ00_004105
NZ_PJUS02000149.1	Protein Homology	CDS	12544	12747	.	-	0	ID=cds-WP_081248051.1;Parent=gene-CYJ00_RS13560;Dbxref=GenBank:WP_081248051.1;Name=WP_081248051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=CYJ00_RS13560;product=DUF6007 family protein;protein_id=WP_081248051.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	12849	13295	.	-	.	ID=gene-CYJ00_RS04105;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CYJ00_RS04105;old_locus_tag=CYJ00_004110
NZ_PJUS02000149.1	Protein Homology	CDS	12849	13295	.	-	0	ID=cds-WP_014612676.1;Parent=gene-CYJ00_RS04105;Dbxref=GenBank:WP_014612676.1;Name=WP_014612676.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=CYJ00_RS04105;product=50S ribosomal protein L9;protein_id=WP_014612676.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	13292	15259	.	-	.	ID=gene-CYJ00_RS04110;Name=CYJ00_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04110;old_locus_tag=CYJ00_004115
NZ_PJUS02000149.1	Protein Homology	CDS	13292	15259	.	-	0	ID=cds-WP_014612675.1;Parent=gene-CYJ00_RS04110;Dbxref=GenBank:WP_014612675.1;Name=WP_014612675.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CYJ00_RS04110;product=DHH family phosphoesterase;protein_id=WP_014612675.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	15264	16175	.	-	.	ID=gene-CYJ00_RS04115;Name=CYJ00_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04115;old_locus_tag=CYJ00_004120
NZ_PJUS02000149.1	Protein Homology	CDS	15264	16175	.	-	0	ID=cds-WP_096636813.1;Parent=gene-CYJ00_RS04115;Dbxref=GenBank:WP_096636813.1;Name=WP_096636813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=CYJ00_RS04115;product=DUF2232 domain-containing protein;protein_id=WP_096636813.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	16407	17372	.	-	.	ID=gene-CYJ00_RS04120;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=CYJ00_RS04120;old_locus_tag=CYJ00_004125
NZ_PJUS02000149.1	Protein Homology	CDS	16407	17372	.	-	0	ID=cds-WP_014612673.1;Parent=gene-CYJ00_RS04120;Dbxref=GenBank:WP_014612673.1;Name=WP_014612673.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=CYJ00_RS04120;product=homoserine O-acetyltransferase MetX;protein_id=WP_014612673.1;transl_table=11
NZ_PJUS02000149.1	cmsearch	riboswitch	17456	17560	.	-	.	ID=id-NZ_PJUS02000149.1:17456..17560;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000149.1	RefSeq	gene	17627	17956	.	-	.	ID=gene-CYJ00_RS04125;Name=CYJ00_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04125;old_locus_tag=CYJ00_004130
NZ_PJUS02000149.1	Protein Homology	CDS	17627	17956	.	-	0	ID=cds-WP_101457637.1;Parent=gene-CYJ00_RS04125;Dbxref=GenBank:WP_101457637.1;Name=WP_101457637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166060.1;locus_tag=CYJ00_RS04125;product=AzlD domain-containing protein;protein_id=WP_101457637.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	17953	18645	.	-	.	ID=gene-CYJ00_RS04130;Name=CYJ00_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04130;old_locus_tag=CYJ00_004135
NZ_PJUS02000149.1	Protein Homology	CDS	17953	18645	.	-	0	ID=cds-WP_014612671.1;Parent=gene-CYJ00_RS04130;Dbxref=GenBank:WP_014612671.1;Name=WP_014612671.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498766.1;locus_tag=CYJ00_RS04130;product=AzlC family ABC transporter permease;protein_id=WP_014612671.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	18959	20239	.	-	.	ID=gene-CYJ00_RS04135;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CYJ00_RS04135;old_locus_tag=CYJ00_004140
NZ_PJUS02000149.1	Protein Homology	CDS	18959	20239	.	-	0	ID=cds-WP_015729830.1;Parent=gene-CYJ00_RS04135;Dbxref=GenBank:WP_015729830.1;Name=WP_015729830.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=CYJ00_RS04135;product=serine--tRNA ligase;protein_id=WP_015729830.1;transl_table=11
NZ_PJUS02000149.1	cmsearch	binding_site	20314	20507	.	-	.	ID=id-NZ_PJUS02000149.1:20314..20507;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000149.1	RefSeq	gene	20557	22059	.	-	.	ID=gene-CYJ00_RS04140;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CYJ00_RS04140;old_locus_tag=CYJ00_004145
NZ_PJUS02000149.1	Protein Homology	CDS	20557	22059	.	-	0	ID=cds-WP_020219988.1;Parent=gene-CYJ00_RS04140;Dbxref=GenBank:WP_020219988.1;Name=WP_020219988.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729831.1;locus_tag=CYJ00_RS04140;product=histidine ammonia-lyase;protein_id=WP_020219988.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	22409	23224	.	+	.	ID=gene-CYJ00_RS04145;Name=CYJ00_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04145;old_locus_tag=CYJ00_004150
NZ_PJUS02000149.1	Protein Homology	CDS	22409	23224	.	+	0	ID=cds-WP_014612668.1;Parent=gene-CYJ00_RS04145;Dbxref=GenBank:WP_014612668.1;Name=WP_014612668.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612668.1;locus_tag=CYJ00_RS04145;product=NAD(P)H-hydrate dehydratase;protein_id=WP_014612668.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	23476	26112	.	-	.	ID=gene-CYJ00_RS04150;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04150;old_locus_tag=CYJ00_004155
NZ_PJUS02000149.1	Protein Homology	CDS	23476	26112	.	-	0	ID=cds-WP_096548382.1;Parent=gene-CYJ00_RS04150;Dbxref=GenBank:WP_096548382.1;Name=WP_096548382.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729832.1;locus_tag=CYJ00_RS04150;product=DNA gyrase subunit A;protein_id=WP_096548382.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	26148	28079	.	-	.	ID=gene-CYJ00_RS04155;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04155;old_locus_tag=CYJ00_004160
NZ_PJUS02000149.1	Protein Homology	CDS	26148	28079	.	-	0	ID=cds-WP_370863201.1;Parent=gene-CYJ00_RS04155;Dbxref=GenBank:WP_370863201.1;Name=WP_370863201.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=CYJ00_RS04155;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_370863201.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	28093	29208	.	-	.	ID=gene-CYJ00_RS04160;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CYJ00_RS04160;old_locus_tag=CYJ00_004165
NZ_PJUS02000149.1	Protein Homology	CDS	28093	29208	.	-	0	ID=cds-WP_014612665.1;Parent=gene-CYJ00_RS04160;Dbxref=GenBank:WP_014612665.1;Name=WP_014612665.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169017.1;locus_tag=CYJ00_RS04160;product=DNA replication/repair protein RecF;protein_id=WP_014612665.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	29205	29444	.	-	.	ID=gene-CYJ00_RS04165;Name=CYJ00_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04165;old_locus_tag=CYJ00_004170
NZ_PJUS02000149.1	Protein Homology	CDS	29205	29444	.	-	0	ID=cds-WP_019166052.1;Parent=gene-CYJ00_RS04165;Dbxref=GenBank:WP_019166052.1;Name=WP_019166052.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425730.1;locus_tag=CYJ00_RS04165;product=RNA-binding S4 domain-containing protein;protein_id=WP_019166052.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	29564	30253	.	-	.	ID=gene-CYJ00_RS04170;Name=CYJ00_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04170;old_locus_tag=CYJ00_004175
NZ_PJUS02000149.1	Protein Homology	CDS	29564	30253	.	-	0	ID=cds-WP_037541974.1;Parent=gene-CYJ00_RS04170;Dbxref=GenBank:WP_037541974.1;Name=WP_037541974.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729834.1;locus_tag=CYJ00_RS04170;product=DsbA family protein;protein_id=WP_037541974.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	30536	31669	.	-	.	ID=gene-CYJ00_RS04175;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CYJ00_RS04175;old_locus_tag=CYJ00_004180
NZ_PJUS02000149.1	Protein Homology	CDS	30536	31669	.	-	0	ID=cds-WP_014612662.1;Parent=gene-CYJ00_RS04175;Dbxref=GenBank:WP_014612662.1;Name=WP_014612662.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CYJ00_RS04175;product=DNA polymerase III subunit beta;protein_id=WP_014612662.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	31841	33184	.	-	.	ID=gene-CYJ00_RS04180;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04180;old_locus_tag=CYJ00_004185
NZ_PJUS02000149.1	Protein Homology	CDS	31841	33184	.	-	0	ID=cds-WP_099986593.1;Parent=gene-CYJ00_RS04180;Dbxref=GenBank:WP_099986593.1;Name=WP_099986593.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168324.1;locus_tag=CYJ00_RS04180;product=chromosomal replication initiator protein DnaA;protein_id=WP_099986593.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	33728	33865	.	+	.	ID=gene-CYJ00_RS04185;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CYJ00_RS04185;old_locus_tag=CYJ00_004190
NZ_PJUS02000149.1	Protein Homology	CDS	33728	33865	.	+	0	ID=cds-WP_000240855.1;Parent=gene-CYJ00_RS04185;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CYJ00_RS04185;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	34039	34386	.	+	.	ID=gene-CYJ00_RS04190;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04190;old_locus_tag=CYJ00_004195
NZ_PJUS02000149.1	Protein Homology	CDS	34039	34386	.	+	0	ID=cds-WP_015728500.1;Parent=gene-CYJ00_RS04190;Dbxref=GenBank:WP_015728500.1;Name=WP_015728500.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=CYJ00_RS04190;product=ribonuclease P protein component;protein_id=WP_015728500.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	34522	35943	.	+	.	ID=gene-CYJ00_RS04195;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CYJ00_RS04195;old_locus_tag=CYJ00_004200
NZ_PJUS02000149.1	Protein Homology	CDS	34522	35943	.	+	0	ID=cds-WP_070407305.1;Parent=gene-CYJ00_RS04195;Dbxref=GenBank:WP_070407305.1;Name=WP_070407305.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=CYJ00_RS04195;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_070407305.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	35962	37836	.	+	.	ID=gene-CYJ00_RS04200;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04200;old_locus_tag=CYJ00_004205
NZ_PJUS02000149.1	Protein Homology	CDS	35962	37836	.	+	0	ID=cds-WP_015728502.1;Parent=gene-CYJ00_RS04200;Dbxref=GenBank:WP_015728502.1;Name=WP_015728502.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=CYJ00_RS04200;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_015728502.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	37837	38556	.	+	.	ID=gene-CYJ00_RS04205;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04205;old_locus_tag=CYJ00_004210
NZ_PJUS02000149.1	Protein Homology	CDS	37837	38556	.	+	0	ID=cds-WP_037541963.1;Parent=gene-CYJ00_RS04205;Dbxref=GenBank:WP_037541963.1;Name=WP_037541963.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=CYJ00_RS04205;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_037541963.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	38594	39445	.	+	.	ID=gene-CYJ00_RS04210;Name=CYJ00_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04210;old_locus_tag=CYJ00_004215
NZ_PJUS02000149.1	Protein Homology	CDS	38594	39445	.	+	0	ID=cds-WP_014614952.1;Parent=gene-CYJ00_RS04210;Dbxref=GenBank:WP_014614952.1;Name=WP_014614952.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=CYJ00_RS04210;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014614952.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	40084	40398	.	+	.	ID=gene-CYJ00_RS04215;Name=CYJ00_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04215;old_locus_tag=CYJ00_004220
NZ_PJUS02000149.1	Protein Homology	CDS	40084	40398	.	+	0	ID=cds-WP_014614950.1;Parent=gene-CYJ00_RS04215;Dbxref=GenBank:WP_014614950.1;Name=WP_014614950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614950.1;locus_tag=CYJ00_RS04215;product=hypothetical protein;protein_id=WP_014614950.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	gene	40548	40736	.	+	.	ID=gene-CYJ00_RS04220;Name=CYJ00_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04220;old_locus_tag=CYJ00_004225
NZ_PJUS02000149.1	Protein Homology	CDS	40548	40736	.	+	0	ID=cds-WP_080552883.1;Parent=gene-CYJ00_RS04220;Dbxref=GenBank:WP_080552883.1;Name=WP_080552883.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469691.1;locus_tag=CYJ00_RS04220;product=helix-turn-helix transcriptional regulator;protein_id=WP_080552883.1;transl_table=11
NZ_PJUS02000149.1	RefSeq	pseudogene	40743	40963	.	+	.	ID=gene-CYJ00_RS13440;Name=CYJ00_RS13440;end_range=40963,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13440;old_locus_tag=CYJ00_004230;partial=true;pseudo=true
NZ_PJUS02000149.1	Protein Homology	CDS	40743	40963	.	+	0	ID=cds-CYJ00_RS13440;Parent=gene-CYJ00_RS13440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=40963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614948.1;locus_tag=CYJ00_RS13440;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000412.1 1 21530
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000412.1	RefSeq	region	1	21530	.	+	.	ID=NZ_PJUS02000412.1:1..21530;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000412.1	RefSeq	pseudogene	1	661	.	+	.	ID=gene-CYJ00_RS12070;Name=CYJ00_RS12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12070;old_locus_tag=CYJ00_012075;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000412.1	Protein Homology	CDS	1	661	.	+	1	ID=cds-CYJ00_RS12070;Parent=gene-CYJ00_RS12070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000980137.1;locus_tag=CYJ00_RS12070;partial=true;product=YkvI family membrane protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	704	1729	.	+	.	ID=gene-CYJ00_RS12075;Name=CYJ00_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12075;old_locus_tag=CYJ00_012080
NZ_PJUS02000412.1	Protein Homology	CDS	704	1729	.	+	0	ID=cds-WP_014614605.1;Parent=gene-CYJ00_RS12075;Dbxref=GenBank:WP_014614605.1;Name=WP_014614605.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=CYJ00_RS12075;product=alpha/beta hydrolase;protein_id=WP_014614605.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	1994	2515	.	-	.	ID=gene-CYJ00_RS12080;Name=CYJ00_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12080;old_locus_tag=CYJ00_012085
NZ_PJUS02000412.1	Protein Homology	CDS	1994	2515	.	-	0	ID=cds-WP_020220153.1;Parent=gene-CYJ00_RS12080;Dbxref=GenBank:WP_020220153.1;Name=WP_020220153.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=CYJ00_RS12080;product=GNAT family N-acetyltransferase;protein_id=WP_020220153.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	2676	3596	.	+	.	ID=gene-CYJ00_RS12085;Name=CYJ00_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12085;old_locus_tag=CYJ00_012090
NZ_PJUS02000412.1	Protein Homology	CDS	2676	3596	.	+	0	ID=cds-WP_014614603.1;Parent=gene-CYJ00_RS12085;Dbxref=GenBank:WP_014614603.1;Name=WP_014614603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614603.1;locus_tag=CYJ00_RS12085;product=NAD(P)H-binding protein;protein_id=WP_014614603.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	3602	4282	.	+	.	ID=gene-CYJ00_RS12090;Name=CYJ00_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12090;old_locus_tag=CYJ00_012095
NZ_PJUS02000412.1	Protein Homology	CDS	3602	4282	.	+	0	ID=cds-WP_014614602.1;Parent=gene-CYJ00_RS12090;Dbxref=GenBank:WP_014614602.1;Name=WP_014614602.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614602.1;locus_tag=CYJ00_RS12090;product=response regulator transcription factor;protein_id=WP_014614602.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	4269	5291	.	+	.	ID=gene-CYJ00_RS12095;Name=CYJ00_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12095;old_locus_tag=CYJ00_012100
NZ_PJUS02000412.1	Protein Homology	CDS	4269	5291	.	+	0	ID=cds-WP_101457656.1;Parent=gene-CYJ00_RS12095;Dbxref=GenBank:WP_101457656.1;Name=WP_101457656.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614601.1;locus_tag=CYJ00_RS12095;product=sensor histidine kinase;protein_id=WP_101457656.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	5397	6158	.	+	.	ID=gene-CYJ00_RS12100;Name=CYJ00_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12100;old_locus_tag=CYJ00_012105
NZ_PJUS02000412.1	Protein Homology	CDS	5397	6158	.	+	0	ID=cds-WP_014614600.1;Parent=gene-CYJ00_RS12100;Dbxref=GenBank:WP_014614600.1;Name=WP_014614600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166204.1;locus_tag=CYJ00_RS12100;product=ABC transporter ATP-binding protein;protein_id=WP_014614600.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	6148	8046	.	+	.	ID=gene-CYJ00_RS12105;Name=CYJ00_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12105;old_locus_tag=CYJ00_012110
NZ_PJUS02000412.1	Protein Homology	CDS	6148	8046	.	+	0	ID=cds-WP_065354538.1;Parent=gene-CYJ00_RS12105;Dbxref=GenBank:WP_065354538.1;Name=WP_065354538.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614599.1;locus_tag=CYJ00_RS12105;product=FtsX-like permease family protein;protein_id=WP_065354538.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	8800	9417	.	+	.	ID=gene-CYJ00_RS12110;Name=CYJ00_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12110;old_locus_tag=CYJ00_012115
NZ_PJUS02000412.1	Protein Homology	CDS	8800	9417	.	+	0	ID=cds-WP_014614598.1;Parent=gene-CYJ00_RS12110;Dbxref=GenBank:WP_014614598.1;Name=WP_014614598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=CYJ00_RS12110;product=DUF47 domain-containing protein;protein_id=WP_014614598.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	9432	10433	.	+	.	ID=gene-CYJ00_RS12115;Name=CYJ00_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12115;old_locus_tag=CYJ00_012120
NZ_PJUS02000412.1	Protein Homology	CDS	9432	10433	.	+	0	ID=cds-WP_014614597.1;Parent=gene-CYJ00_RS12115;Dbxref=GenBank:WP_014614597.1;Name=WP_014614597.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=CYJ00_RS12115;product=inorganic phosphate transporter;protein_id=WP_014614597.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	10694	11521	.	-	.	ID=gene-CYJ00_RS12120;Name=CYJ00_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12120;old_locus_tag=CYJ00_012125
NZ_PJUS02000412.1	Protein Homology	CDS	10694	11521	.	-	0	ID=cds-WP_014614596.1;Parent=gene-CYJ00_RS12120;Dbxref=GenBank:WP_014614596.1;Name=WP_014614596.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166201.1;locus_tag=CYJ00_RS12120;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614596.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	11862	12482	.	+	.	ID=gene-CYJ00_RS12125;Name=CYJ00_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12125;old_locus_tag=CYJ00_012130
NZ_PJUS02000412.1	Protein Homology	CDS	11862	12482	.	+	0	ID=cds-WP_063278884.1;Parent=gene-CYJ00_RS12125;Dbxref=GenBank:WP_063278884.1;Name=WP_063278884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166200.1;locus_tag=CYJ00_RS12125;product=Bax inhibitor-1/YccA family protein;protein_id=WP_063278884.1;transl_table=11
NZ_PJUS02000412.1	cmsearch	riboswitch	12501	12609	.	+	.	ID=id-NZ_PJUS02000412.1:12501..12609;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000412.1	RefSeq	gene	12687	13277	.	+	.	ID=gene-CYJ00_RS12130;Name=CYJ00_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12130;old_locus_tag=CYJ00_012135
NZ_PJUS02000412.1	Protein Homology	CDS	12687	13277	.	+	0	ID=cds-WP_063278885.1;Parent=gene-CYJ00_RS12130;Dbxref=GenBank:WP_063278885.1;Name=WP_063278885.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728709.1;locus_tag=CYJ00_RS12130;product=thiamine phosphate synthase;protein_id=WP_063278885.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	13278	13478	.	+	.	ID=gene-CYJ00_RS12135;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CYJ00_RS12135;old_locus_tag=CYJ00_012140
NZ_PJUS02000412.1	Protein Homology	CDS	13278	13478	.	+	0	ID=cds-WP_014614593.1;Parent=gene-CYJ00_RS12135;Dbxref=GenBank:WP_014614593.1;Name=WP_014614593.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614593.1;locus_tag=CYJ00_RS12135;product=sulfur carrier protein ThiS;protein_id=WP_014614593.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	13482	14249	.	+	.	ID=gene-CYJ00_RS12140;Name=CYJ00_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12140;old_locus_tag=CYJ00_012145
NZ_PJUS02000412.1	Protein Homology	CDS	13482	14249	.	+	0	ID=cds-WP_015728710.1;Parent=gene-CYJ00_RS12140;Dbxref=GenBank:WP_015728710.1;Name=WP_015728710.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=CYJ00_RS12140;product=thiazole synthase;protein_id=WP_015728710.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	14249	15253	.	+	.	ID=gene-CYJ00_RS12145;Name=CYJ00_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12145;old_locus_tag=CYJ00_012150
NZ_PJUS02000412.1	Protein Homology	CDS	14249	15253	.	+	0	ID=cds-WP_014614591.1;Parent=gene-CYJ00_RS12145;Dbxref=GenBank:WP_014614591.1;Name=WP_014614591.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=CYJ00_RS12145;product=ThiF family adenylyltransferase;protein_id=WP_014614591.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	15329	16045	.	+	.	ID=gene-CYJ00_RS12150;Name=CYJ00_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12150;old_locus_tag=CYJ00_012155
NZ_PJUS02000412.1	Protein Homology	CDS	15329	16045	.	+	0	ID=cds-WP_014614590.1;Parent=gene-CYJ00_RS12150;Dbxref=GenBank:WP_014614590.1;Name=WP_014614590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383182.1;locus_tag=CYJ00_RS12150;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_014614590.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	16064	16543	.	+	.	ID=gene-CYJ00_RS12155;Name=CYJ00_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12155;old_locus_tag=CYJ00_012160
NZ_PJUS02000412.1	Protein Homology	CDS	16064	16543	.	+	0	ID=cds-WP_015728712.1;Parent=gene-CYJ00_RS12155;Dbxref=GenBank:WP_015728712.1;Name=WP_015728712.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728712.1;locus_tag=CYJ00_RS12155;product=cupin domain-containing protein;protein_id=WP_015728712.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	16866	17462	.	+	.	ID=gene-CYJ00_RS12160;Name=CYJ00_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12160;old_locus_tag=CYJ00_012165
NZ_PJUS02000412.1	Protein Homology	CDS	16866	17462	.	+	0	ID=cds-WP_014614588.1;Parent=gene-CYJ00_RS12160;Dbxref=GenBank:WP_014614588.1;Name=WP_014614588.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=CYJ00_RS12160;product=ribonuclease FAU-1 family protein;protein_id=WP_014614588.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	17551	18420	.	+	.	ID=gene-CYJ00_RS12165;Name=CYJ00_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12165;old_locus_tag=CYJ00_012170
NZ_PJUS02000412.1	Protein Homology	CDS	17551	18420	.	+	0	ID=cds-WP_014614587.1;Parent=gene-CYJ00_RS12165;Dbxref=GenBank:WP_014614587.1;Name=WP_014614587.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614587.1;locus_tag=CYJ00_RS12165;product=LysR family transcriptional regulator;protein_id=WP_014614587.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	18500	19705	.	+	.	ID=gene-CYJ00_RS12170;Name=CYJ00_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12170;old_locus_tag=CYJ00_012175
NZ_PJUS02000412.1	Protein Homology	CDS	18500	19705	.	+	0	ID=cds-WP_101457657.1;Parent=gene-CYJ00_RS12170;Dbxref=GenBank:WP_101457657.1;Name=WP_101457657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166191.1;locus_tag=CYJ00_RS12170;product=sugar efflux transporter;protein_id=WP_101457657.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	19727	20218	.	+	.	ID=gene-CYJ00_RS12175;Name=CYJ00_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12175;old_locus_tag=CYJ00_012180
NZ_PJUS02000412.1	Protein Homology	CDS	19727	20218	.	+	0	ID=cds-WP_015728715.1;Parent=gene-CYJ00_RS12175;Dbxref=GenBank:WP_015728715.1;Name=WP_015728715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168579.1;locus_tag=CYJ00_RS12175;product=DUF456 domain-containing protein;protein_id=WP_015728715.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	20303	20986	.	-	.	ID=gene-CYJ00_RS12180;Name=CYJ00_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12180;old_locus_tag=CYJ00_012185
NZ_PJUS02000412.1	Protein Homology	CDS	20303	20986	.	-	0	ID=cds-WP_014614584.1;Parent=gene-CYJ00_RS12180;Dbxref=GenBank:WP_014614584.1;Name=WP_014614584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=CYJ00_RS12180;product=DUF1129 family protein;protein_id=WP_014614584.1;transl_table=11
NZ_PJUS02000412.1	RefSeq	gene	21085	21530	.	+	.	ID=gene-CYJ00_RS12185;Name=CYJ00_RS12185;end_range=21530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12185;old_locus_tag=CYJ00_012190;partial=true
NZ_PJUS02000412.1	Protein Homology	CDS	21085	21530	.	+	0	ID=cds-WP_101457658.1;Parent=gene-CYJ00_RS12185;Dbxref=GenBank:WP_101457658.1;Name=WP_101457658.1;Ontology_term=GO:0008080,GO:0016746;end_range=21530,.;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166188.1;locus_tag=CYJ00_RS12185;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_101457658.1;transl_table=11
##sequence-region NZ_PJUS02000117.1 1 7895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000117.1	RefSeq	region	1	7895	.	+	.	ID=NZ_PJUS02000117.1:1..7895;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000117.1	RefSeq	gene	1	559	.	+	.	ID=gene-CYJ00_RS03345;Name=CYJ00_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03345;old_locus_tag=CYJ00_003350;partial=true;start_range=.,1
NZ_PJUS02000117.1	Protein Homology	CDS	1	559	.	+	1	ID=cds-WP_101457814.1;Parent=gene-CYJ00_RS03345;Dbxref=GenBank:WP_101457814.1;Name=WP_101457814.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=CYJ00_RS03345;partial=true;product=anthranilate synthase component II;protein_id=WP_101457814.1;start_range=.,1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	543	1691	.	+	.	ID=gene-CYJ00_RS03350;Name=CYJ00_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03350;old_locus_tag=CYJ00_003355
NZ_PJUS02000117.1	Protein Homology	CDS	543	1691	.	+	0	ID=cds-WP_037543791.1;Parent=gene-CYJ00_RS03350;Dbxref=GenBank:WP_037543791.1;Name=WP_037543791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=CYJ00_RS03350;product=chorismate-binding protein;protein_id=WP_037543791.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	1688	2302	.	+	.	ID=gene-CYJ00_RS03355;Name=CYJ00_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03355;old_locus_tag=CYJ00_003360
NZ_PJUS02000117.1	Protein Homology	CDS	1688	2302	.	+	0	ID=cds-WP_065520666.1;Parent=gene-CYJ00_RS03355;Dbxref=GenBank:WP_065520666.1;Name=WP_065520666.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166152.1;locus_tag=CYJ00_RS03355;product=aminotransferase class IV;protein_id=WP_065520666.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	2311	2520	.	+	.	ID=gene-CYJ00_RS03360;Name=CYJ00_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03360;old_locus_tag=CYJ00_003365
NZ_PJUS02000117.1	Protein Homology	CDS	2311	2520	.	+	0	ID=cds-WP_014614545.1;Parent=gene-CYJ00_RS03360;Dbxref=GenBank:WP_014614545.1;Name=WP_014614545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614545.1;locus_tag=CYJ00_RS03360;product=hypothetical protein;protein_id=WP_014614545.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	2531	3214	.	+	.	ID=gene-CYJ00_RS03365;Name=CYJ00_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03365;old_locus_tag=CYJ00_003370
NZ_PJUS02000117.1	Protein Homology	CDS	2531	3214	.	+	0	ID=cds-WP_014614544.1;Parent=gene-CYJ00_RS03365;Dbxref=GenBank:WP_014614544.1;Name=WP_014614544.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166150.1;locus_tag=CYJ00_RS03365;product=5-oxoprolinase subunit B family protein;protein_id=WP_014614544.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	3211	4215	.	+	.	ID=gene-CYJ00_RS03370;Name=CYJ00_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03370;old_locus_tag=CYJ00_003375
NZ_PJUS02000117.1	Protein Homology	CDS	3211	4215	.	+	0	ID=cds-WP_014614543.1;Parent=gene-CYJ00_RS03370;Dbxref=GenBank:WP_014614543.1;Name=WP_014614543.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=CYJ00_RS03370;product=5-oxoprolinase subunit C family protein;protein_id=WP_014614543.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	gene	4560	6497	.	+	.	ID=gene-CYJ00_RS03375;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=CYJ00_RS03375;old_locus_tag=CYJ00_003380
NZ_PJUS02000117.1	Protein Homology	CDS	4560	6497	.	+	0	ID=cds-WP_101457815.1;Parent=gene-CYJ00_RS03375;Dbxref=GenBank:WP_101457815.1;Name=WP_101457815.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834931.1;locus_tag=CYJ00_RS03375;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_101457815.1;transl_table=11
NZ_PJUS02000117.1	RefSeq	pseudogene	6611	6988	.	+	.	ID=gene-CYJ00_RS13885;Name=CYJ00_RS13885;end_range=6988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13885;old_locus_tag=CYJ00_003385;partial=true;pseudo=true;start_range=.,6611
NZ_PJUS02000117.1	Protein Homology	CDS	6611	6988	.	+	0	ID=cds-CYJ00_RS13885;Parent=gene-CYJ00_RS13885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ00_RS13885;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,6611;transl_table=11
##sequence-region NZ_PJUS02000043.1 1 8348
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000043.1	RefSeq	region	1	8348	.	+	.	ID=NZ_PJUS02000043.1:1..8348;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000043.1	RefSeq	gene	54	578	.	-	.	ID=gene-CYJ00_RS01145;Name=CYJ00_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01145;old_locus_tag=CYJ00_001145
NZ_PJUS02000043.1	Protein Homology	CDS	54	578	.	-	0	ID=cds-WP_096534009.1;Parent=gene-CYJ00_RS01145;Dbxref=GenBank:WP_096534009.1;Name=WP_096534009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CYJ00_RS01145;product=F0F1 ATP synthase subunit B;protein_id=WP_096534009.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	739	951	.	-	.	ID=gene-CYJ00_RS01150;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CYJ00_RS01150;old_locus_tag=CYJ00_001150
NZ_PJUS02000043.1	Protein Homology	CDS	739	951	.	-	0	ID=cds-WP_014613343.1;Parent=gene-CYJ00_RS01150;Dbxref=GenBank:WP_014613343.1;Name=WP_014613343.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613343.1;locus_tag=CYJ00_RS01150;product=F0F1 ATP synthase subunit C;protein_id=WP_014613343.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	994	1716	.	-	.	ID=gene-CYJ00_RS01155;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01155;old_locus_tag=CYJ00_001155
NZ_PJUS02000043.1	Protein Homology	CDS	994	1716	.	-	0	ID=cds-WP_037542529.1;Parent=gene-CYJ00_RS01155;Dbxref=GenBank:WP_037542529.1;Name=WP_037542529.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275237.1;locus_tag=CYJ00_RS01155;product=F0F1 ATP synthase subunit A;protein_id=WP_037542529.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	1751	2107	.	-	.	ID=gene-CYJ00_RS01160;Name=CYJ00_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01160;old_locus_tag=CYJ00_001160
NZ_PJUS02000043.1	Protein Homology	CDS	1751	2107	.	-	0	ID=cds-WP_014613341.1;Parent=gene-CYJ00_RS01160;Dbxref=GenBank:WP_014613341.1;Name=WP_014613341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=CYJ00_RS01160;product=ATP synthase subunit I;protein_id=WP_014613341.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	2276	3415	.	-	.	ID=gene-CYJ00_RS01165;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01165;old_locus_tag=CYJ00_001165
NZ_PJUS02000043.1	Protein Homology	CDS	2276	3415	.	-	0	ID=cds-WP_015729441.1;Parent=gene-CYJ00_RS01165;Dbxref=GenBank:WP_015729441.1;Name=WP_015729441.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169294.1;locus_tag=CYJ00_RS01165;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_015729441.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	3438	4067	.	-	.	ID=gene-CYJ00_RS01170;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CYJ00_RS01170;old_locus_tag=CYJ00_001170
NZ_PJUS02000043.1	Protein Homology	CDS	3438	4067	.	-	0	ID=cds-WP_014613339.1;Parent=gene-CYJ00_RS01170;Dbxref=GenBank:WP_014613339.1;Name=WP_014613339.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=CYJ00_RS01170;product=uracil phosphoribosyltransferase;protein_id=WP_014613339.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	4101	5339	.	-	.	ID=gene-CYJ00_RS01175;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01175;old_locus_tag=CYJ00_001175
NZ_PJUS02000043.1	Protein Homology	CDS	4101	5339	.	-	0	ID=cds-WP_014613338.1;Parent=gene-CYJ00_RS01175;Dbxref=GenBank:WP_014613338.1;Name=WP_014613338.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500830.1;locus_tag=CYJ00_RS01175;product=serine hydroxymethyltransferase;protein_id=WP_014613338.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	5360	5887	.	-	.	ID=gene-CYJ00_RS01180;Name=CYJ00_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01180;old_locus_tag=CYJ00_001180
NZ_PJUS02000043.1	Protein Homology	CDS	5360	5887	.	-	0	ID=cds-WP_014613337.1;Parent=gene-CYJ00_RS01180;Dbxref=GenBank:WP_014613337.1;Name=WP_014613337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=CYJ00_RS01180;product=TIGR01440 family protein;protein_id=WP_014613337.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	6005	6430	.	-	.	ID=gene-CYJ00_RS01185;Name=CYJ00_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01185;old_locus_tag=CYJ00_001185
NZ_PJUS02000043.1	Protein Homology	CDS	6005	6430	.	-	0	ID=cds-WP_099986635.1;Parent=gene-CYJ00_RS01185;Dbxref=GenBank:WP_099986635.1;Name=WP_099986635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=CYJ00_RS01185;product=low molecular weight protein arginine phosphatase;protein_id=WP_099986635.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	6427	7479	.	-	.	ID=gene-CYJ00_RS01190;Name=CYJ00_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01190;old_locus_tag=CYJ00_001190
NZ_PJUS02000043.1	Protein Homology	CDS	6427	7479	.	-	0	ID=cds-WP_014613335.1;Parent=gene-CYJ00_RS01190;Dbxref=GenBank:WP_014613335.1;Name=WP_014613335.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613335.1;locus_tag=CYJ00_RS01190;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_014613335.1;transl_table=11
NZ_PJUS02000043.1	RefSeq	gene	7645	8348	.	-	.	ID=gene-CYJ00_RS01195;Name=prmC;end_range=8348,.;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=CYJ00_RS01195;old_locus_tag=CYJ00_001195;partial=true
NZ_PJUS02000043.1	Protein Homology	CDS	7645	8348	.	-	2	ID=cds-WP_101457816.1;Parent=gene-CYJ00_RS01195;Dbxref=GenBank:WP_101457816.1;Name=WP_101457816.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;end_range=8348,.;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=CYJ00_RS01195;partial=true;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_101457816.1;transl_table=11
##sequence-region NZ_PJUS02000337.1 1 8781
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000337.1	RefSeq	region	1	8781	.	+	.	ID=NZ_PJUS02000337.1:1..8781;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000337.1	RefSeq	gene	293	2914	.	-	.	ID=gene-CYJ00_RS10310;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10310;old_locus_tag=CYJ00_010320
NZ_PJUS02000337.1	Protein Homology	CDS	293	2914	.	-	0	ID=cds-WP_101457817.1;Parent=gene-CYJ00_RS10310;Dbxref=GenBank:WP_101457817.1;Name=WP_101457817.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166000.1;locus_tag=CYJ00_RS10310;product=ATP-dependent chaperone ClpB;protein_id=WP_101457817.1;transl_table=11
NZ_PJUS02000337.1	RefSeq	pseudogene	3192	3338	.	+	.	ID=gene-CYJ00_RS13750;Name=CYJ00_RS13750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13750;old_locus_tag=CYJ00_010325;partial=true;pseudo=true;start_range=.,3192
NZ_PJUS02000337.1	Protein Homology	CDS	3192	3338	.	+	0	ID=cds-CYJ00_RS13750;Parent=gene-CYJ00_RS13750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ00_RS13750;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,3192;transl_table=11
NZ_PJUS02000337.1	RefSeq	gene	3519	5363	.	-	.	ID=gene-CYJ00_RS10320;Name=CYJ00_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10320;old_locus_tag=CYJ00_010330
NZ_PJUS02000337.1	Protein Homology	CDS	3519	5363	.	-	0	ID=cds-WP_014614388.1;Parent=gene-CYJ00_RS10320;Dbxref=GenBank:WP_014614388.1;Name=WP_014614388.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614388.1;locus_tag=CYJ00_RS10320;product=acyltransferase family protein;protein_id=WP_014614388.1;transl_table=11
NZ_PJUS02000337.1	RefSeq	gene	5633	5941	.	-	.	ID=gene-CYJ00_RS10325;Name=CYJ00_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10325;old_locus_tag=CYJ00_010335
NZ_PJUS02000337.1	Protein Homology	CDS	5633	5941	.	-	0	ID=cds-WP_014614389.1;Parent=gene-CYJ00_RS10325;Dbxref=GenBank:WP_014614389.1;Name=WP_014614389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=CYJ00_RS10325;product=metal-sulfur cluster assembly factor;protein_id=WP_014614389.1;transl_table=11
NZ_PJUS02000337.1	RefSeq	gene	6055	6879	.	+	.	ID=gene-CYJ00_RS10330;Name=CYJ00_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10330;old_locus_tag=CYJ00_010340
NZ_PJUS02000337.1	Protein Homology	CDS	6055	6879	.	+	0	ID=cds-WP_014614390.1;Parent=gene-CYJ00_RS10330;Dbxref=GenBank:WP_014614390.1;Name=WP_014614390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614390.1;locus_tag=CYJ00_RS10330;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014614390.1;transl_table=11
NZ_PJUS02000337.1	RefSeq	gene	6910	8235	.	+	.	ID=gene-CYJ00_RS10335;Name=CYJ00_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10335;old_locus_tag=CYJ00_010345
NZ_PJUS02000337.1	Protein Homology	CDS	6910	8235	.	+	0	ID=cds-WP_014614391.1;Parent=gene-CYJ00_RS10335;Dbxref=GenBank:WP_014614391.1;Name=WP_014614391.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=CYJ00_RS10335;product=CoA-disulfide reductase;protein_id=WP_014614391.1;transl_table=11
NZ_PJUS02000337.1	RefSeq	gene	8339	8728	.	-	.	ID=gene-CYJ00_RS10340;Name=CYJ00_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10340;old_locus_tag=CYJ00_010350
NZ_PJUS02000337.1	Protein Homology	CDS	8339	8728	.	-	0	ID=cds-WP_014614393.1;Parent=gene-CYJ00_RS10340;Dbxref=GenBank:WP_014614393.1;Name=WP_014614393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=CYJ00_RS10340;product=YisL family protein;protein_id=WP_014614393.1;transl_table=11
##sequence-region NZ_PJUS02000245.1 1 8792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000245.1	RefSeq	region	1	8792	.	+	.	ID=NZ_PJUS02000245.1:1..8792;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000245.1	RefSeq	gene	1	771	.	+	.	ID=gene-CYJ00_RS06740;Name=CYJ00_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06740;old_locus_tag=CYJ00_006745;partial=true;start_range=.,1
NZ_PJUS02000245.1	Protein Homology	CDS	1	771	.	+	0	ID=cds-WP_133158336.1;Parent=gene-CYJ00_RS06740;Dbxref=GenBank:WP_133158336.1;Name=WP_133158336.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=CYJ00_RS06740;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_133158336.1;start_range=.,1;transl_table=11
NZ_PJUS02000245.1	RefSeq	gene	895	2103	.	+	.	ID=gene-CYJ00_RS06745;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=CYJ00_RS06745;old_locus_tag=CYJ00_006750
NZ_PJUS02000245.1	Protein Homology	CDS	895	2103	.	+	0	ID=cds-WP_037544107.1;Parent=gene-CYJ00_RS06745;Dbxref=GenBank:WP_037544107.1;Name=WP_037544107.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916108.1;locus_tag=CYJ00_RS06745;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_037544107.1;transl_table=11
NZ_PJUS02000245.1	RefSeq	gene	2114	3679	.	+	.	ID=gene-CYJ00_RS06750;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CYJ00_RS06750;old_locus_tag=CYJ00_006755
NZ_PJUS02000245.1	Protein Homology	CDS	2114	3679	.	+	0	ID=cds-WP_015729742.1;Parent=gene-CYJ00_RS06750;Dbxref=GenBank:WP_015729742.1;Name=WP_015729742.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612820.1;locus_tag=CYJ00_RS06750;product=accessory Sec system protein Asp1;protein_id=WP_015729742.1;transl_table=11
NZ_PJUS02000245.1	RefSeq	gene	3663	5207	.	+	.	ID=gene-CYJ00_RS06755;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CYJ00_RS06755;old_locus_tag=CYJ00_006760
NZ_PJUS02000245.1	Protein Homology	CDS	3663	5207	.	+	0	ID=cds-WP_063284745.1;Parent=gene-CYJ00_RS06755;Dbxref=GenBank:WP_063284745.1;Name=WP_063284745.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612821.1;locus_tag=CYJ00_RS06755;product=accessory Sec system protein Asp2;protein_id=WP_063284745.1;transl_table=11
NZ_PJUS02000245.1	RefSeq	gene	5197	6123	.	+	.	ID=gene-CYJ00_RS06760;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CYJ00_RS06760;old_locus_tag=CYJ00_006765
NZ_PJUS02000245.1	Protein Homology	CDS	5197	6123	.	+	0	ID=cds-WP_096536584.1;Parent=gene-CYJ00_RS06760;Dbxref=GenBank:WP_096536584.1;Name=WP_096536584.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729740.1;locus_tag=CYJ00_RS06760;product=accessory Sec system protein Asp3;protein_id=WP_096536584.1;transl_table=11
NZ_PJUS02000245.1	RefSeq	gene	6120	8507	.	+	.	ID=gene-CYJ00_RS06765;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CYJ00_RS06765;old_locus_tag=CYJ00_006770
NZ_PJUS02000245.1	Protein Homology	CDS	6120	8507	.	+	0	ID=cds-WP_015729739.1;Parent=gene-CYJ00_RS06765;Dbxref=GenBank:WP_015729739.1;Name=WP_015729739.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=CYJ00_RS06765;product=accessory Sec system translocase SecA2;protein_id=WP_015729739.1;transl_table=11
NZ_PJUS02000245.1	RefSeq	pseudogene	8523	8792	.	+	.	ID=gene-CYJ00_RS06770;Name=CYJ00_RS06770;end_range=8792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06770;old_locus_tag=CYJ00_006775;partial=true;pseudo=true
NZ_PJUS02000245.1	Protein Homology	CDS	8523	8792	.	+	0	ID=cds-CYJ00_RS06770;Parent=gene-CYJ00_RS06770;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612824.1;locus_tag=CYJ00_RS06770;partial=true;product=accessory Sec system glycosyltransferase GtfA;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000203.1 1 9127
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000203.1	RefSeq	region	1	9127	.	+	.	ID=NZ_PJUS02000203.1:1..9127;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000203.1	RefSeq	gene	83	481	.	+	.	ID=gene-CYJ00_RS05615;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CYJ00_RS05615;old_locus_tag=CYJ00_005620
NZ_PJUS02000203.1	Protein Homology	CDS	83	481	.	+	0	ID=cds-WP_014614524.1;Parent=gene-CYJ00_RS05615;Dbxref=GenBank:WP_014614524.1;Name=WP_014614524.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CYJ00_RS05615;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_014614524.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	444	2549	.	+	.	ID=gene-CYJ00_RS05620;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CYJ00_RS05620;old_locus_tag=CYJ00_005625
NZ_PJUS02000203.1	Protein Homology	CDS	444	2549	.	+	0	ID=cds-WP_014614523.1;Parent=gene-CYJ00_RS05620;Dbxref=GenBank:WP_014614523.1;Name=WP_014614523.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=CYJ00_RS05620;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014614523.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	2777	3739	.	+	.	ID=gene-CYJ00_RS05625;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CYJ00_RS05625;old_locus_tag=CYJ00_005630
NZ_PJUS02000203.1	Protein Homology	CDS	2777	3739	.	+	0	ID=cds-WP_014614522.1;Parent=gene-CYJ00_RS05625;Dbxref=GenBank:WP_014614522.1;Name=WP_014614522.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166133.1;locus_tag=CYJ00_RS05625;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_014614522.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	4120	4434	.	-	.	ID=gene-CYJ00_RS05630;Name=CYJ00_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05630;old_locus_tag=CYJ00_005635
NZ_PJUS02000203.1	Protein Homology	CDS	4120	4434	.	-	0	ID=cds-WP_014614521.1;Parent=gene-CYJ00_RS05630;Dbxref=GenBank:WP_014614521.1;Name=WP_014614521.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614521.1;locus_tag=CYJ00_RS05630;product=CHY zinc finger protein;protein_id=WP_014614521.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	4459	5388	.	-	.	ID=gene-CYJ00_RS05635;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05635;old_locus_tag=CYJ00_005640
NZ_PJUS02000203.1	Protein Homology	CDS	4459	5388	.	-	0	ID=cds-WP_423830913.1;Parent=gene-CYJ00_RS05635;Dbxref=GenBank:WP_423830913.1;Name=WP_423830913.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219843.1;locus_tag=CYJ00_RS05635;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_423830913.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	5533	6051	.	-	.	ID=gene-CYJ00_RS05640;Name=CYJ00_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05640;old_locus_tag=CYJ00_005645
NZ_PJUS02000203.1	Protein Homology	CDS	5533	6051	.	-	0	ID=cds-WP_014614519.1;Parent=gene-CYJ00_RS05640;Dbxref=GenBank:WP_014614519.1;Name=WP_014614519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168519.1;locus_tag=CYJ00_RS05640;product=GrpB family protein;protein_id=WP_014614519.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	6162	7055	.	+	.	ID=gene-CYJ00_RS05645;Name=CYJ00_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05645;old_locus_tag=CYJ00_005650
NZ_PJUS02000203.1	Protein Homology	CDS	6162	7055	.	+	0	ID=cds-WP_014614518.1;Parent=gene-CYJ00_RS05645;Dbxref=GenBank:WP_014614518.1;Name=WP_014614518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614518.1;locus_tag=CYJ00_RS05645;product=EMYY motif lipoprotein;protein_id=WP_014614518.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	7220	7540	.	+	.	ID=gene-CYJ00_RS05650;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS05650;old_locus_tag=CYJ00_005655
NZ_PJUS02000203.1	Protein Homology	CDS	7220	7540	.	+	0	ID=cds-WP_014614517.1;Parent=gene-CYJ00_RS05650;Dbxref=GenBank:WP_014614517.1;Name=WP_014614517.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=CYJ00_RS05650;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_014614517.1;transl_table=11
NZ_PJUS02000203.1	RefSeq	gene	7895	9010	.	+	.	ID=gene-CYJ00_RS05655;Name=CYJ00_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05655;old_locus_tag=CYJ00_005660
NZ_PJUS02000203.1	Protein Homology	CDS	7895	9010	.	+	0	ID=cds-WP_014614516.1;Parent=gene-CYJ00_RS05655;Dbxref=GenBank:WP_014614516.1;Name=WP_014614516.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166128.1;locus_tag=CYJ00_RS05655;product=glycerate kinase;protein_id=WP_014614516.1;transl_table=11
##sequence-region NZ_PJUS02000083.1 1 8113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000083.1	RefSeq	region	1	8113	.	+	.	ID=NZ_PJUS02000083.1:1..8113;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000083.1	RefSeq	gene	1	2134	.	+	.	ID=gene-CYJ00_RS02285;Name=CYJ00_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02285;old_locus_tag=CYJ00_002285;partial=true;start_range=.,1
NZ_PJUS02000083.1	Protein Homology	CDS	1	2134	.	+	1	ID=cds-WP_101457819.1;Parent=gene-CYJ00_RS02285;Dbxref=GenBank:WP_101457819.1;Name=WP_101457819.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=CYJ00_RS02285;partial=true;product=Na+/H+ antiporter subunit A;protein_id=WP_101457819.1;start_range=.,1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	2097	2543	.	+	.	ID=gene-CYJ00_RS02290;Name=CYJ00_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02290;old_locus_tag=CYJ00_002290
NZ_PJUS02000083.1	Protein Homology	CDS	2097	2543	.	+	0	ID=cds-WP_014614415.1;Parent=gene-CYJ00_RS02290;Dbxref=GenBank:WP_014614415.1;Name=WP_014614415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=CYJ00_RS02290;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_014614415.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	2543	2890	.	+	.	ID=gene-CYJ00_RS02295;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=CYJ00_RS02295;old_locus_tag=CYJ00_002295
NZ_PJUS02000083.1	Protein Homology	CDS	2543	2890	.	+	0	ID=cds-WP_014614416.1;Parent=gene-CYJ00_RS02295;Dbxref=GenBank:WP_014614416.1;Name=WP_014614416.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=CYJ00_RS02295;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_014614416.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	2880	4379	.	+	.	ID=gene-CYJ00_RS02300;Name=CYJ00_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02300;old_locus_tag=CYJ00_002300
NZ_PJUS02000083.1	Protein Homology	CDS	2880	4379	.	+	0	ID=cds-WP_014614417.1;Parent=gene-CYJ00_RS02300;Dbxref=GenBank:WP_014614417.1;Name=WP_014614417.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166977.1;locus_tag=CYJ00_RS02300;product=Na+/H+ antiporter subunit D;protein_id=WP_014614417.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	4381	4860	.	+	.	ID=gene-CYJ00_RS02305;Name=CYJ00_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02305;old_locus_tag=CYJ00_002305
NZ_PJUS02000083.1	Protein Homology	CDS	4381	4860	.	+	0	ID=cds-WP_014614418.1;Parent=gene-CYJ00_RS02305;Dbxref=GenBank:WP_014614418.1;Name=WP_014614418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=CYJ00_RS02305;product=Na+/H+ antiporter subunit E;protein_id=WP_014614418.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	4860	5153	.	+	.	ID=gene-CYJ00_RS02310;Name=CYJ00_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02310;old_locus_tag=CYJ00_002310
NZ_PJUS02000083.1	Protein Homology	CDS	4860	5153	.	+	0	ID=cds-WP_014614419.1;Parent=gene-CYJ00_RS02310;Dbxref=GenBank:WP_014614419.1;Name=WP_014614419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=CYJ00_RS02310;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_014614419.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	5131	5487	.	+	.	ID=gene-CYJ00_RS02315;Name=CYJ00_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02315;old_locus_tag=CYJ00_002315
NZ_PJUS02000083.1	Protein Homology	CDS	5131	5487	.	+	0	ID=cds-WP_014614420.1;Parent=gene-CYJ00_RS02315;Dbxref=GenBank:WP_014614420.1;Name=WP_014614420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=CYJ00_RS02315;product=Na+/H+ antiporter subunit G1;protein_id=WP_014614420.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	6424	6801	.	-	.	ID=gene-CYJ00_RS02320;Name=CYJ00_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02320;old_locus_tag=CYJ00_002320
NZ_PJUS02000083.1	Protein Homology	CDS	6424	6801	.	-	0	ID=cds-WP_037543544.1;Parent=gene-CYJ00_RS02320;Dbxref=GenBank:WP_037543544.1;Name=WP_037543544.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728863.1;locus_tag=CYJ00_RS02320;product=PaaI family thioesterase;protein_id=WP_037543544.1;transl_table=11
NZ_PJUS02000083.1	RefSeq	gene	6825	8111	.	-	.	ID=gene-CYJ00_RS02325;Name=CYJ00_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02325;old_locus_tag=CYJ00_002325
NZ_PJUS02000083.1	Protein Homology	CDS	6825	8111	.	-	0	ID=cds-WP_241956932.1;Parent=gene-CYJ00_RS02325;Dbxref=GenBank:WP_241956932.1;Name=WP_241956932.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=CYJ00_RS02325;product=Na+/H+ antiporter family protein;protein_id=WP_241956932.1;transl_table=11
##sequence-region NZ_PJUS02000408.1 1 9048
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000408.1	RefSeq	region	1	9048	.	+	.	ID=NZ_PJUS02000408.1:1..9048;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000408.1	RefSeq	gene	81	470	.	-	.	ID=gene-CYJ00_RS11930;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CYJ00_RS11930;old_locus_tag=CYJ00_011935
NZ_PJUS02000408.1	Protein Homology	CDS	81	470	.	-	0	ID=cds-WP_014613235.1;Parent=gene-CYJ00_RS11930;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CYJ00_RS11930;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	495	860	.	-	.	ID=gene-CYJ00_RS11935;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CYJ00_RS11935;old_locus_tag=CYJ00_011940
NZ_PJUS02000408.1	Protein Homology	CDS	495	860	.	-	0	ID=cds-WP_014613234.1;Parent=gene-CYJ00_RS11935;Dbxref=GenBank:WP_014613234.1;Name=WP_014613234.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CYJ00_RS11935;product=30S ribosomal protein S13;protein_id=WP_014613234.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	884	997	.	-	.	ID=gene-CYJ00_RS11940;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS11940;old_locus_tag=CYJ00_011945
NZ_PJUS02000408.1	Protein Homology	CDS	884	997	.	-	0	ID=cds-WP_002509257.1;Parent=gene-CYJ00_RS11940;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=CYJ00_RS11940;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	1029	1247	.	-	.	ID=gene-CYJ00_RS11945;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CYJ00_RS11945;old_locus_tag=CYJ00_011950
NZ_PJUS02000408.1	Protein Homology	CDS	1029	1247	.	-	0	ID=cds-WP_001118443.1;Parent=gene-CYJ00_RS11945;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=CYJ00_RS11945;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	1414	2067	.	-	.	ID=gene-CYJ00_RS11950;Name=CYJ00_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11950;old_locus_tag=CYJ00_011955
NZ_PJUS02000408.1	Protein Homology	CDS	1414	2067	.	-	0	ID=cds-WP_101431503.1;Parent=gene-CYJ00_RS11950;Dbxref=GenBank:WP_101431503.1;Name=WP_101431503.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613233.1;locus_tag=CYJ00_RS11950;product=adenylate kinase;protein_id=WP_101431503.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	2085	3377	.	-	.	ID=gene-CYJ00_RS11955;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CYJ00_RS11955;old_locus_tag=CYJ00_011960
NZ_PJUS02000408.1	Protein Homology	CDS	2085	3377	.	-	0	ID=cds-WP_014613232.1;Parent=gene-CYJ00_RS11955;Dbxref=GenBank:WP_014613232.1;Name=WP_014613232.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CYJ00_RS11955;product=preprotein translocase subunit SecY;protein_id=WP_014613232.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	3377	3817	.	-	.	ID=gene-CYJ00_RS11960;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CYJ00_RS11960;old_locus_tag=CYJ00_011965
NZ_PJUS02000408.1	Protein Homology	CDS	3377	3817	.	-	0	ID=cds-WP_014613231.1;Parent=gene-CYJ00_RS11960;Dbxref=GenBank:WP_014613231.1;Name=WP_014613231.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=CYJ00_RS11960;product=50S ribosomal protein L15;protein_id=WP_014613231.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	3834	4013	.	-	.	ID=gene-CYJ00_RS11965;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CYJ00_RS11965;old_locus_tag=CYJ00_011970
NZ_PJUS02000408.1	Protein Homology	CDS	3834	4013	.	-	0	ID=cds-WP_014613230.1;Parent=gene-CYJ00_RS11965;Dbxref=GenBank:WP_014613230.1;Name=WP_014613230.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=CYJ00_RS11965;product=50S ribosomal protein L30;protein_id=WP_014613230.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	4030	4530	.	-	.	ID=gene-CYJ00_RS11970;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CYJ00_RS11970;old_locus_tag=CYJ00_011975
NZ_PJUS02000408.1	Protein Homology	CDS	4030	4530	.	-	0	ID=cds-WP_014613229.1;Parent=gene-CYJ00_RS11970;Dbxref=GenBank:WP_014613229.1;Name=WP_014613229.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CYJ00_RS11970;product=30S ribosomal protein S5;protein_id=WP_014613229.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	4553	4912	.	-	.	ID=gene-CYJ00_RS11975;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CYJ00_RS11975;old_locus_tag=CYJ00_011980
NZ_PJUS02000408.1	Protein Homology	CDS	4553	4912	.	-	0	ID=cds-WP_014613228.1;Parent=gene-CYJ00_RS11975;Dbxref=GenBank:WP_014613228.1;Name=WP_014613228.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CYJ00_RS11975;product=50S ribosomal protein L18;protein_id=WP_014613228.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	4944	5480	.	-	.	ID=gene-CYJ00_RS11980;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CYJ00_RS11980;old_locus_tag=CYJ00_011985
NZ_PJUS02000408.1	Protein Homology	CDS	4944	5480	.	-	0	ID=cds-WP_014613227.1;Parent=gene-CYJ00_RS11980;Dbxref=GenBank:WP_014613227.1;Name=WP_014613227.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CYJ00_RS11980;product=50S ribosomal protein L6;protein_id=WP_014613227.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	5509	5907	.	-	.	ID=gene-CYJ00_RS11985;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CYJ00_RS11985;old_locus_tag=CYJ00_011990
NZ_PJUS02000408.1	Protein Homology	CDS	5509	5907	.	-	0	ID=cds-WP_014613226.1;Parent=gene-CYJ00_RS11985;Dbxref=GenBank:WP_014613226.1;Name=WP_014613226.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CYJ00_RS11985;product=30S ribosomal protein S8;protein_id=WP_014613226.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	5938	6123	.	-	.	ID=gene-CYJ00_RS11990;Name=CYJ00_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11990;old_locus_tag=CYJ00_011995
NZ_PJUS02000408.1	Protein Homology	CDS	5938	6123	.	-	0	ID=cds-WP_014613225.1;Parent=gene-CYJ00_RS11990;Dbxref=GenBank:WP_014613225.1;Name=WP_014613225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=CYJ00_RS11990;product=type Z 30S ribosomal protein S14;protein_id=WP_014613225.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	6145	6684	.	-	.	ID=gene-CYJ00_RS11995;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CYJ00_RS11995;old_locus_tag=CYJ00_012000
NZ_PJUS02000408.1	Protein Homology	CDS	6145	6684	.	-	0	ID=cds-WP_014613224.1;Parent=gene-CYJ00_RS11995;Dbxref=GenBank:WP_014613224.1;Name=WP_014613224.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=CYJ00_RS11995;product=50S ribosomal protein L5;protein_id=WP_014613224.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	6710	7024	.	-	.	ID=gene-CYJ00_RS12000;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CYJ00_RS12000;old_locus_tag=CYJ00_012005
NZ_PJUS02000408.1	Protein Homology	CDS	6710	7024	.	-	0	ID=cds-WP_014613223.1;Parent=gene-CYJ00_RS12000;Dbxref=GenBank:WP_014613223.1;Name=WP_014613223.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613223.1;locus_tag=CYJ00_RS12000;product=50S ribosomal protein L24;protein_id=WP_014613223.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	7068	7436	.	-	.	ID=gene-CYJ00_RS12005;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CYJ00_RS12005;old_locus_tag=CYJ00_012010
NZ_PJUS02000408.1	Protein Homology	CDS	7068	7436	.	-	0	ID=cds-WP_014613222.1;Parent=gene-CYJ00_RS12005;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=CYJ00_RS12005;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	7465	7728	.	-	.	ID=gene-CYJ00_RS12010;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS12010;old_locus_tag=CYJ00_012015
NZ_PJUS02000408.1	Protein Homology	CDS	7465	7728	.	-	0	ID=cds-WP_014613221.1;Parent=gene-CYJ00_RS12010;Dbxref=GenBank:WP_014613221.1;Name=WP_014613221.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CYJ00_RS12010;product=30S ribosomal protein S17;protein_id=WP_014613221.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	7754	7963	.	-	.	ID=gene-CYJ00_RS12015;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12015;old_locus_tag=CYJ00_012020
NZ_PJUS02000408.1	Protein Homology	CDS	7754	7963	.	-	0	ID=cds-WP_014613220.1;Parent=gene-CYJ00_RS12015;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CYJ00_RS12015;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	7953	8387	.	-	.	ID=gene-CYJ00_RS12020;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CYJ00_RS12020;old_locus_tag=CYJ00_012025
NZ_PJUS02000408.1	Protein Homology	CDS	7953	8387	.	-	0	ID=cds-WP_014613219.1;Parent=gene-CYJ00_RS12020;Dbxref=GenBank:WP_014613219.1;Name=WP_014613219.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CYJ00_RS12020;product=50S ribosomal protein L16;protein_id=WP_014613219.1;transl_table=11
NZ_PJUS02000408.1	RefSeq	gene	8390	9031	.	-	.	ID=gene-CYJ00_RS12025;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12025;old_locus_tag=CYJ00_012030
NZ_PJUS02000408.1	Protein Homology	CDS	8390	9031	.	-	0	ID=cds-WP_101457821.1;Parent=gene-CYJ00_RS12025;Dbxref=GenBank:WP_101457821.1;Name=WP_101457821.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=CYJ00_RS12025;product=30S ribosomal protein S3;protein_id=WP_101457821.1;transl_table=11
##sequence-region NZ_PJUS02000306.1 1 6398
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000306.1	RefSeq	region	1	6398	.	+	.	ID=NZ_PJUS02000306.1:1..6398;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000306.1	RefSeq	gene	158	272	.	+	.	ID=gene-CYJ00_RS08280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ00_RS08280;old_locus_tag=CYJ00_008285
NZ_PJUS02000306.1	cmsearch	rRNA	158	272	.	+	.	ID=rna-CYJ00_RS08280;Parent=gene-CYJ00_RS08280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08280;product=5S ribosomal RNA
NZ_PJUS02000306.1	cmsearch	exon	158	272	.	+	.	ID=exon-CYJ00_RS08280-1;Parent=rna-CYJ00_RS08280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08280;product=5S ribosomal RNA
NZ_PJUS02000306.1	RefSeq	gene	360	2288	.	+	.	ID=gene-CYJ00_RS08285;Name=CYJ00_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08285;old_locus_tag=CYJ00_008290
NZ_PJUS02000306.1	Protein Homology	CDS	360	2288	.	+	0	ID=cds-WP_099991752.1;Parent=gene-CYJ00_RS08285;Dbxref=GenBank:WP_099991752.1;Name=WP_099991752.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=CYJ00_RS08285;product=FUSC family protein;protein_id=WP_099991752.1;transl_table=11
NZ_PJUS02000306.1	RefSeq	gene	2342	3751	.	-	.	ID=gene-CYJ00_RS08290;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CYJ00_RS08290;old_locus_tag=CYJ00_008295
NZ_PJUS02000306.1	Protein Homology	CDS	2342	3751	.	-	0	ID=cds-WP_063284840.1;Parent=gene-CYJ00_RS08290;Dbxref=GenBank:WP_063284840.1;Name=WP_063284840.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614785.1;locus_tag=CYJ00_RS08290;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_063284840.1;transl_table=11
NZ_PJUS02000306.1	RefSeq	gene	3861	4748	.	+	.	ID=gene-CYJ00_RS08295;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08295;old_locus_tag=CYJ00_008300
NZ_PJUS02000306.1	Protein Homology	CDS	3861	4748	.	+	0	ID=cds-WP_014614784.1;Parent=gene-CYJ00_RS08295;Dbxref=GenBank:WP_014614784.1;Name=WP_014614784.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CYJ00_RS08295;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_014614784.1;transl_table=11
NZ_PJUS02000306.1	RefSeq	gene	4750	5307	.	+	.	ID=gene-CYJ00_RS08300;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=CYJ00_RS08300;old_locus_tag=CYJ00_008305
NZ_PJUS02000306.1	Protein Homology	CDS	4750	5307	.	+	0	ID=cds-WP_014614783.1;Parent=gene-CYJ00_RS08300;Dbxref=GenBank:WP_014614783.1;Name=WP_014614783.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614783.1;locus_tag=CYJ00_RS08300;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_014614783.1;transl_table=11
NZ_PJUS02000306.1	RefSeq	gene	5450	6208	.	-	.	ID=gene-CYJ00_RS08305;Name=CYJ00_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08305;old_locus_tag=CYJ00_008310
NZ_PJUS02000306.1	Protein Homology	CDS	5450	6208	.	-	0	ID=cds-WP_063284841.1;Parent=gene-CYJ00_RS08305;Dbxref=GenBank:WP_063284841.1;Name=WP_063284841.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614782.1;locus_tag=CYJ00_RS08305;product=trypsin-like serine peptidase;protein_id=WP_063284841.1;transl_table=11
##sequence-region NZ_PJUS02000133.1 1 4846
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000133.1	RefSeq	region	1	4846	.	+	.	ID=NZ_PJUS02000133.1:1..4846;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000133.1	RefSeq	gene	491	1318	.	-	.	ID=gene-CYJ00_RS03715;Name=CYJ00_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03715;old_locus_tag=CYJ00_003720
NZ_PJUS02000133.1	Protein Homology	CDS	491	1318	.	-	0	ID=cds-WP_374761573.1;Parent=gene-CYJ00_RS03715;Dbxref=GenBank:WP_374761573.1;Name=WP_374761573.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=CYJ00_RS03715;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_374761573.1;transl_table=11
NZ_PJUS02000133.1	RefSeq	gene	1308	3932	.	-	.	ID=gene-CYJ00_RS03720;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=CYJ00_RS03720;old_locus_tag=CYJ00_003725
NZ_PJUS02000133.1	Protein Homology	CDS	1308	3932	.	-	0	ID=cds-WP_101457823.1;Parent=gene-CYJ00_RS03720;Dbxref=GenBank:WP_101457823.1;Name=WP_101457823.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728560.1;locus_tag=CYJ00_RS03720;product=pyruvate%2C phosphate dikinase;protein_id=WP_101457823.1;transl_table=11
NZ_PJUS02000133.1	RefSeq	gene	4168	4332	.	+	.	ID=gene-CYJ00_RS13550;Name=CYJ00_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13550
NZ_PJUS02000133.1	GeneMarkS-2+	CDS	4168	4332	.	+	0	ID=cds-WP_237614615.1;Parent=gene-CYJ00_RS13550;Dbxref=GenBank:WP_237614615.1;Name=WP_237614615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13550;product=hypothetical protein;protein_id=WP_237614615.1;transl_table=11
##sequence-region NZ_PJUS02000305.1 1 8427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000305.1	RefSeq	region	1	8427	.	+	.	ID=NZ_PJUS02000305.1:1..8427;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000305.1	RefSeq	gene	616	681	.	+	.	ID=gene-CYJ00_RS13950;Name=CYJ00_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13950;old_locus_tag=CYJ00_008245
NZ_PJUS02000305.1	Protein Homology	CDS	616	681	.	+	0	ID=cds-WP_095658924.1;Parent=gene-CYJ00_RS13950;Dbxref=GenBank:WP_095658924.1;Name=WP_095658924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=CYJ00_RS13950;product=epsilon family phenol-soluble modulin;protein_id=WP_095658924.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	872	1381	.	-	.	ID=gene-CYJ00_RS08245;Name=CYJ00_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08245;old_locus_tag=CYJ00_008250
NZ_PJUS02000305.1	Protein Homology	CDS	872	1381	.	-	0	ID=cds-WP_014614197.1;Parent=gene-CYJ00_RS08245;Dbxref=GenBank:WP_014614197.1;Name=WP_014614197.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166348.1;locus_tag=CYJ00_RS08245;product=YfcE family phosphodiesterase;protein_id=WP_014614197.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	1378	1962	.	-	.	ID=gene-CYJ00_RS08250;Name=CYJ00_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08250;old_locus_tag=CYJ00_008255
NZ_PJUS02000305.1	Protein Homology	CDS	1378	1962	.	-	0	ID=cds-WP_014614198.1;Parent=gene-CYJ00_RS08250;Dbxref=GenBank:WP_014614198.1;Name=WP_014614198.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614198.1;locus_tag=CYJ00_RS08250;product=XTP/dITP diphosphatase;protein_id=WP_014614198.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	1974	2771	.	-	.	ID=gene-CYJ00_RS08255;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=CYJ00_RS08255;old_locus_tag=CYJ00_008260
NZ_PJUS02000305.1	Protein Homology	CDS	1974	2771	.	-	0	ID=cds-WP_014614199.1;Parent=gene-CYJ00_RS08255;Dbxref=GenBank:WP_014614199.1;Name=WP_014614199.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166350.1;locus_tag=CYJ00_RS08255;product=glutamate racemase;protein_id=WP_014614199.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	3022	3837	.	-	.	ID=gene-CYJ00_RS08260;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08260;old_locus_tag=CYJ00_008265
NZ_PJUS02000305.1	Protein Homology	CDS	3022	3837	.	-	0	ID=cds-WP_014614200.1;Parent=gene-CYJ00_RS08260;Dbxref=GenBank:WP_014614200.1;Name=WP_014614200.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365172.1;locus_tag=CYJ00_RS08260;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_014614200.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	3837	5603	.	-	.	ID=gene-CYJ00_RS08265;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08265;old_locus_tag=CYJ00_008270
NZ_PJUS02000305.1	Protein Homology	CDS	3837	5603	.	-	0	ID=cds-WP_014614201.1;Parent=gene-CYJ00_RS08265;Dbxref=GenBank:WP_014614201.1;Name=WP_014614201.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=CYJ00_RS08265;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_014614201.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	5636	6247	.	-	.	ID=gene-CYJ00_RS08270;Name=CYJ00_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08270;old_locus_tag=CYJ00_008275
NZ_PJUS02000305.1	Protein Homology	CDS	5636	6247	.	-	0	ID=cds-WP_014614202.1;Parent=gene-CYJ00_RS08270;Dbxref=GenBank:WP_014614202.1;Name=WP_014614202.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637638.1;locus_tag=CYJ00_RS08270;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_014614202.1;transl_table=11
NZ_PJUS02000305.1	RefSeq	gene	6411	8198	.	-	.	ID=gene-CYJ00_RS08275;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CYJ00_RS08275;old_locus_tag=CYJ00_008280
NZ_PJUS02000305.1	Protein Homology	CDS	6411	8198	.	-	0	ID=cds-WP_014614203.1;Parent=gene-CYJ00_RS08275;Dbxref=GenBank:WP_014614203.1;Name=WP_014614203.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614203.1;locus_tag=CYJ00_RS08275;product=excinuclease ABC subunit UvrC;protein_id=WP_014614203.1;transl_table=11
##sequence-region NZ_PJUS02000141.1 1 21951
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000141.1	RefSeq	region	1	21951	.	+	.	ID=NZ_PJUS02000141.1:1..21951;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000141.1	RefSeq	gene	1	350	.	+	.	ID=gene-CYJ00_RS03830;Name=CYJ00_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03830;old_locus_tag=CYJ00_003835;partial=true;start_range=.,1
NZ_PJUS02000141.1	Protein Homology	CDS	1	350	.	+	2	ID=cds-WP_101457659.1;Parent=gene-CYJ00_RS03830;Dbxref=GenBank:WP_101457659.1;Name=WP_101457659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612844.1;locus_tag=CYJ00_RS03830;partial=true;product=DoxX family protein;protein_id=WP_101457659.1;start_range=.,1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	328	1014	.	+	.	ID=gene-CYJ00_RS03835;Name=CYJ00_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03835;old_locus_tag=CYJ00_003840
NZ_PJUS02000141.1	Protein Homology	CDS	328	1014	.	+	0	ID=cds-WP_015729722.1;Parent=gene-CYJ00_RS03835;Dbxref=GenBank:WP_015729722.1;Name=WP_015729722.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729722.1;locus_tag=CYJ00_RS03835;product=response regulator transcription factor;protein_id=WP_015729722.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	1015	2049	.	+	.	ID=gene-CYJ00_RS03840;Name=CYJ00_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03840;old_locus_tag=CYJ00_003845
NZ_PJUS02000141.1	Protein Homology	CDS	1015	2049	.	+	0	ID=cds-WP_014612846.1;Parent=gene-CYJ00_RS03840;Dbxref=GenBank:WP_014612846.1;Name=WP_014612846.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612846.1;locus_tag=CYJ00_RS03840;product=sensor histidine kinase;protein_id=WP_014612846.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	2553	4487	.	+	.	ID=gene-CYJ00_RS03845;Name=CYJ00_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03845;old_locus_tag=CYJ00_003850
NZ_PJUS02000141.1	Protein Homology	CDS	2553	4487	.	+	0	ID=cds-WP_101457660.1;Parent=gene-CYJ00_RS03845;Dbxref=GenBank:WP_101457660.1;Name=WP_101457660.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729721.1;locus_tag=CYJ00_RS03845;product=BglG family transcription antiterminator;protein_id=WP_101457660.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	4500	4949	.	+	.	ID=gene-CYJ00_RS03850;Name=CYJ00_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03850;old_locus_tag=CYJ00_003855
NZ_PJUS02000141.1	Protein Homology	CDS	4500	4949	.	+	0	ID=cds-WP_014612848.1;Parent=gene-CYJ00_RS03850;Dbxref=GenBank:WP_014612848.1;Name=WP_014612848.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612848.1;locus_tag=CYJ00_RS03850;product=PTS sugar transporter subunit IIA;protein_id=WP_014612848.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	4946	5230	.	+	.	ID=gene-CYJ00_RS03855;Name=CYJ00_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03855;old_locus_tag=CYJ00_003860
NZ_PJUS02000141.1	Protein Homology	CDS	4946	5230	.	+	0	ID=cds-WP_014612849.1;Parent=gene-CYJ00_RS03855;Dbxref=GenBank:WP_014612849.1;Name=WP_014612849.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=CYJ00_RS03855;product=PTS sugar transporter subunit IIB;protein_id=WP_014612849.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	5249	6610	.	+	.	ID=gene-CYJ00_RS03860;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ00_RS03860;old_locus_tag=CYJ00_003865
NZ_PJUS02000141.1	Protein Homology	CDS	5249	6610	.	+	0	ID=cds-WP_014612850.1;Parent=gene-CYJ00_RS03860;Dbxref=GenBank:WP_014612850.1;Name=WP_014612850.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219422.1;locus_tag=CYJ00_RS03860;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014612850.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	6738	6851	.	-	.	ID=gene-CYJ00_RS12980;Name=CYJ00_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12980
NZ_PJUS02000141.1	Protein Homology	CDS	6738	6851	.	-	0	ID=cds-WP_110144662.1;Parent=gene-CYJ00_RS12980;Dbxref=GenBank:WP_110144662.1;Name=WP_110144662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033608.1;locus_tag=CYJ00_RS12980;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_110144662.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	7665	9515	.	+	.	ID=gene-CYJ00_RS03865;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CYJ00_RS03865;old_locus_tag=CYJ00_003870
NZ_PJUS02000141.1	Protein Homology	CDS	7665	9515	.	+	0	ID=cds-WP_014612852.1;Parent=gene-CYJ00_RS03865;Dbxref=GenBank:WP_014612852.1;Name=WP_014612852.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=CYJ00_RS03865;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_014612852.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	9512	10051	.	+	.	ID=gene-CYJ00_RS03870;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CYJ00_RS03870;old_locus_tag=CYJ00_003875
NZ_PJUS02000141.1	Protein Homology	CDS	9512	10051	.	+	0	ID=cds-WP_014612853.1;Parent=gene-CYJ00_RS03870;Dbxref=GenBank:WP_014612853.1;Name=WP_014612853.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612853.1;locus_tag=CYJ00_RS03870;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_014612853.1;transl_table=11
NZ_PJUS02000141.1	cmsearch	riboswitch	10249	10347	.	+	.	ID=id-NZ_PJUS02000141.1:10249..10347;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000141.1	RefSeq	gene	10411	11688	.	+	.	ID=gene-CYJ00_RS03875;Name=CYJ00_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03875;old_locus_tag=CYJ00_003880
NZ_PJUS02000141.1	Protein Homology	CDS	10411	11688	.	+	0	ID=cds-WP_014612854.1;Parent=gene-CYJ00_RS03875;Dbxref=GenBank:WP_014612854.1;Name=WP_014612854.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=CYJ00_RS03875;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_014612854.1;transl_table=11
NZ_PJUS02000141.1	cmsearch	riboswitch	11845	11945	.	+	.	ID=id-NZ_PJUS02000141.1:11845..11945;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000141.1	RefSeq	gene	11991	13370	.	+	.	ID=gene-CYJ00_RS03880;Name=CYJ00_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03880;old_locus_tag=CYJ00_003885
NZ_PJUS02000141.1	Protein Homology	CDS	11991	13370	.	+	0	ID=cds-WP_101457661.1;Parent=gene-CYJ00_RS03880;Dbxref=GenBank:WP_101457661.1;Name=WP_101457661.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729717.1;locus_tag=CYJ00_RS03880;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_101457661.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	pseudogene	13381	14881	.	+	.	ID=gene-CYJ00_RS03885;Name=CYJ00_RS03885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03885;old_locus_tag=CYJ00_003890;pseudo=true
NZ_PJUS02000141.1	Protein Homology	CDS	13381	14881	.	+	0	ID=cds-CYJ00_RS03885;Parent=gene-CYJ00_RS03885;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729716.1;locus_tag=CYJ00_RS03885;product=sodium:solute symporter family protein;pseudo=true;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	14997	15386	.	+	.	ID=gene-CYJ00_RS03890;Name=CYJ00_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03890;old_locus_tag=CYJ00_003895
NZ_PJUS02000141.1	Protein Homology	CDS	14997	15386	.	+	0	ID=cds-WP_020219423.1;Parent=gene-CYJ00_RS03890;Dbxref=GenBank:WP_020219423.1;Name=WP_020219423.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219423.1;locus_tag=CYJ00_RS03890;product=tautomerase family protein;protein_id=WP_020219423.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	15751	16443	.	+	.	ID=gene-CYJ00_RS03895;Name=CYJ00_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03895;old_locus_tag=CYJ00_003900
NZ_PJUS02000141.1	Protein Homology	CDS	15751	16443	.	+	0	ID=cds-WP_172426190.1;Parent=gene-CYJ00_RS03895;Dbxref=GenBank:WP_172426190.1;Name=WP_172426190.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=CYJ00_RS03895;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_172426190.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	16719	18338	.	+	.	ID=gene-CYJ00_RS03900;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03900;old_locus_tag=CYJ00_003905
NZ_PJUS02000141.1	Protein Homology	CDS	16719	18338	.	+	0	ID=cds-WP_070407509.1;Parent=gene-CYJ00_RS03900;Dbxref=GenBank:WP_070407509.1;Name=WP_070407509.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729713.1;locus_tag=CYJ00_RS03900;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=WP_070407509.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	18830	19720	.	-	.	ID=gene-CYJ00_RS03905;Name=CYJ00_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03905;old_locus_tag=CYJ00_003910
NZ_PJUS02000141.1	Protein Homology	CDS	18830	19720	.	-	0	ID=cds-WP_014612862.1;Parent=gene-CYJ00_RS03905;Dbxref=GenBank:WP_014612862.1;Name=WP_014612862.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729712.1;locus_tag=CYJ00_RS03905;product=fructose bisphosphate aldolase;protein_id=WP_014612862.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	20127	20813	.	-	.	ID=gene-CYJ00_RS03910;Name=CYJ00_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03910;old_locus_tag=CYJ00_003915
NZ_PJUS02000141.1	Protein Homology	CDS	20127	20813	.	-	0	ID=cds-WP_014612863.1;Parent=gene-CYJ00_RS03910;Dbxref=GenBank:WP_014612863.1;Name=WP_014612863.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169009.1;locus_tag=CYJ00_RS03910;product=acetolactate decarboxylase;protein_id=WP_014612863.1;transl_table=11
NZ_PJUS02000141.1	RefSeq	gene	21304	21951	.	-	.	ID=gene-CYJ00_RS03915;Name=CYJ00_RS03915;end_range=21951,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03915;old_locus_tag=CYJ00_003920;partial=true
NZ_PJUS02000141.1	Protein Homology	CDS	21304	21951	.	-	0	ID=cds-WP_101457662.1;Parent=gene-CYJ00_RS03915;Dbxref=GenBank:WP_101457662.1;Name=WP_101457662.1;Ontology_term=GO:0016491;end_range=21951,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=CYJ00_RS03915;partial=true;product=ketopantoate reductase family protein;protein_id=WP_101457662.1;transl_table=11
##sequence-region NZ_PJUS02000431.1 1 9291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000431.1	RefSeq	region	1	9291	.	+	.	ID=NZ_PJUS02000431.1:1..9291;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000431.1	RefSeq	gene	94	167	.	+	.	ID=gene-CYJ00_RS12815;Name=CYJ00_RS12815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12815;old_locus_tag=CYJ00_012820
NZ_PJUS02000431.1	tRNAscan-SE	tRNA	94	167	.	+	.	ID=rna-CYJ00_RS12815;Parent=gene-CYJ00_RS12815;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12815;product=tRNA-Arg
NZ_PJUS02000431.1	tRNAscan-SE	exon	94	167	.	+	.	ID=exon-CYJ00_RS12815-1;Parent=rna-CYJ00_RS12815;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12815;product=tRNA-Arg
NZ_PJUS02000431.1	RefSeq	gene	592	921	.	-	.	ID=gene-CYJ00_RS12820;Name=CYJ00_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12820;old_locus_tag=CYJ00_012825
NZ_PJUS02000431.1	Protein Homology	CDS	592	921	.	-	0	ID=cds-WP_096535802.1;Parent=gene-CYJ00_RS12820;Dbxref=GenBank:WP_096535802.1;Name=WP_096535802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495128.1;locus_tag=CYJ00_RS12820;product=hypothetical protein;protein_id=WP_096535802.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	937	1461	.	-	.	ID=gene-CYJ00_RS13390;Name=CYJ00_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13390
NZ_PJUS02000431.1	Protein Homology	CDS	937	1461	.	-	0	ID=cds-WP_172968899.1;Parent=gene-CYJ00_RS13390;Dbxref=GenBank:WP_172968899.1;Name=WP_172968899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728980.1;locus_tag=CYJ00_RS13390;product=YqxI family protein;protein_id=WP_172968899.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	1677	2624	.	-	.	ID=gene-CYJ00_RS12835;Name=CYJ00_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12835;old_locus_tag=CYJ00_012840
NZ_PJUS02000431.1	Protein Homology	CDS	1677	2624	.	-	0	ID=cds-WP_101457825.1;Parent=gene-CYJ00_RS12835;Dbxref=GenBank:WP_101457825.1;Name=WP_101457825.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219525.1;locus_tag=CYJ00_RS12835;product=peptidoglycan recognition protein family protein;protein_id=WP_101457825.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	2640	3074	.	-	.	ID=gene-CYJ00_RS12840;Name=CYJ00_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12840;old_locus_tag=CYJ00_012845
NZ_PJUS02000431.1	Protein Homology	CDS	2640	3074	.	-	0	ID=cds-WP_101457826.1;Parent=gene-CYJ00_RS12840;Dbxref=GenBank:WP_101457826.1;Name=WP_101457826.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722742.1;locus_tag=CYJ00_RS12840;product=phage holin family protein;protein_id=WP_101457826.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	3086	4591	.	-	.	ID=gene-CYJ00_RS12845;Name=CYJ00_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12845;old_locus_tag=CYJ00_012850
NZ_PJUS02000431.1	GeneMarkS-2+	CDS	3086	4591	.	-	0	ID=cds-WP_101457827.1;Parent=gene-CYJ00_RS12845;Dbxref=GenBank:WP_101457827.1;Name=WP_101457827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS12845;product=hypothetical protein;protein_id=WP_101457827.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	4639	5919	.	-	.	ID=gene-CYJ00_RS12850;Name=CYJ00_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12850;old_locus_tag=CYJ00_012855
NZ_PJUS02000431.1	Protein Homology	CDS	4639	5919	.	-	0	ID=cds-WP_101457828.1;Parent=gene-CYJ00_RS12850;Dbxref=GenBank:WP_101457828.1;Name=WP_101457828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484785.1;locus_tag=CYJ00_RS12850;product=phage baseplate upper protein;protein_id=WP_101457828.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	5938	6936	.	-	.	ID=gene-CYJ00_RS12855;Name=CYJ00_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12855;old_locus_tag=CYJ00_012860
NZ_PJUS02000431.1	Protein Homology	CDS	5938	6936	.	-	0	ID=cds-WP_101457829.1;Parent=gene-CYJ00_RS12855;Dbxref=GenBank:WP_101457829.1;Name=WP_101457829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493689.1;locus_tag=CYJ00_RS12855;product=SGNH/GDSL hydrolase family protein;protein_id=WP_101457829.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	6947	7588	.	-	.	ID=gene-CYJ00_RS12860;Name=CYJ00_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12860;old_locus_tag=CYJ00_012865
NZ_PJUS02000431.1	Protein Homology	CDS	6947	7588	.	-	0	ID=cds-WP_037543732.1;Parent=gene-CYJ00_RS12860;Dbxref=GenBank:WP_037543732.1;Name=WP_037543732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458424.1;locus_tag=CYJ00_RS12860;product=hypothetical protein;protein_id=WP_037543732.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	gene	7591	9006	.	-	.	ID=gene-CYJ00_RS12865;Name=CYJ00_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12865;old_locus_tag=CYJ00_012870
NZ_PJUS02000431.1	Protein Homology	CDS	7591	9006	.	-	0	ID=cds-WP_101457830.1;Parent=gene-CYJ00_RS12865;Dbxref=GenBank:WP_101457830.1;Name=WP_101457830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018329.9;locus_tag=CYJ00_RS12865;product=tail tube TT1 domain-containing protein;protein_id=WP_101457830.1;transl_table=11
NZ_PJUS02000431.1	RefSeq	pseudogene	9021	9291	.	-	.	ID=gene-CYJ00_RS12870;Name=CYJ00_RS12870;end_range=9291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12870;old_locus_tag=CYJ00_012875;partial=true;pseudo=true
NZ_PJUS02000431.1	GeneMarkS-2+	CDS	9021	9291	.	-	1	ID=cds-CYJ00_RS12870;Parent=gene-CYJ00_RS12870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9291,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS12870;partial=true;product=phage tail domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000077.1 1 9062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000077.1	RefSeq	region	1	9062	.	+	.	ID=NZ_PJUS02000077.1:1..9062;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000077.1	RefSeq	gene	39	446	.	-	.	ID=gene-CYJ00_RS02025;Name=CYJ00_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02025;old_locus_tag=CYJ00_002025
NZ_PJUS02000077.1	Protein Homology	CDS	39	446	.	-	0	ID=cds-WP_014613965.1;Parent=gene-CYJ00_RS02025;Dbxref=GenBank:WP_014613965.1;Name=WP_014613965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=CYJ00_RS02025;product=sporulation protein;protein_id=WP_014613965.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	558	743	.	+	.	ID=gene-CYJ00_RS02030;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=CYJ00_RS02030;old_locus_tag=CYJ00_002030
NZ_PJUS02000077.1	Protein Homology	CDS	558	743	.	+	0	ID=cds-WP_015729095.1;Parent=gene-CYJ00_RS02030;Dbxref=GenBank:WP_015729095.1;Name=WP_015729095.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CYJ00_RS02030;product=2-hydroxymuconate tautomerase;protein_id=WP_015729095.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	799	1770	.	-	.	ID=gene-CYJ00_RS02035;Name=CYJ00_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02035;old_locus_tag=CYJ00_002035
NZ_PJUS02000077.1	Protein Homology	CDS	799	1770	.	-	0	ID=cds-WP_014613967.1;Parent=gene-CYJ00_RS02035;Dbxref=GenBank:WP_014613967.1;Name=WP_014613967.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219592.1;locus_tag=CYJ00_RS02035;product=LCP family protein;protein_id=WP_014613967.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	1909	2427	.	+	.	ID=gene-CYJ00_RS02040;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02040;old_locus_tag=CYJ00_002040
NZ_PJUS02000077.1	Protein Homology	CDS	1909	2427	.	+	0	ID=cds-WP_014613968.1;Parent=gene-CYJ00_RS02040;Dbxref=GenBank:WP_014613968.1;Name=WP_014613968.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613968.1;locus_tag=CYJ00_RS02040;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014613968.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	2674	5193	.	-	.	ID=gene-CYJ00_RS02045;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=CYJ00_RS02045;old_locus_tag=CYJ00_002045
NZ_PJUS02000077.1	Protein Homology	CDS	2674	5193	.	-	0	ID=cds-WP_099991920.1;Parent=gene-CYJ00_RS02045;Dbxref=GenBank:WP_099991920.1;Name=WP_099991920.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729094.1;locus_tag=CYJ00_RS02045;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_099991920.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	5289	6491	.	-	.	ID=gene-CYJ00_RS02050;Name=CYJ00_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02050;old_locus_tag=CYJ00_002050
NZ_PJUS02000077.1	Protein Homology	CDS	5289	6491	.	-	0	ID=cds-WP_015729093.1;Parent=gene-CYJ00_RS02050;Dbxref=GenBank:WP_015729093.1;Name=WP_015729093.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729093.1;locus_tag=CYJ00_RS02050;product=AI-2E family transporter;protein_id=WP_015729093.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	6764	8803	.	-	.	ID=gene-CYJ00_RS02055;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ00_RS02055;old_locus_tag=CYJ00_002055
NZ_PJUS02000077.1	Protein Homology	CDS	6764	8803	.	-	0	ID=cds-WP_014613971.1;Parent=gene-CYJ00_RS02055;Dbxref=GenBank:WP_014613971.1;Name=WP_014613971.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166551.1;locus_tag=CYJ00_RS02055;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_014613971.1;transl_table=11
NZ_PJUS02000077.1	RefSeq	gene	8914	9062	.	-	.	ID=gene-CYJ00_RS02060;Name=CYJ00_RS02060;end_range=9062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02060;old_locus_tag=CYJ00_002060;partial=true
NZ_PJUS02000077.1	Protein Homology	CDS	8914	9062	.	-	2	ID=cds-WP_133158314.1;Parent=gene-CYJ00_RS02060;Dbxref=GenBank:WP_133158314.1;Name=WP_133158314.1;Ontology_term=GO:0006355;end_range=9062,.;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=CYJ00_RS02060;partial=true;product=PRD domain-containing protein;protein_id=WP_133158314.1;transl_table=11
##sequence-region NZ_PJUS02000205.1 1 8671
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000205.1	RefSeq	region	1	8671	.	+	.	ID=NZ_PJUS02000205.1:1..8671;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000205.1	RefSeq	gene	28	846	.	-	.	ID=gene-CYJ00_RS05660;Name=CYJ00_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05660;old_locus_tag=CYJ00_005665
NZ_PJUS02000205.1	Protein Homology	CDS	28	846	.	-	0	ID=cds-WP_020219509.1;Parent=gene-CYJ00_RS05660;Dbxref=GenBank:WP_020219509.1;Name=WP_020219509.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614449.1;locus_tag=CYJ00_RS05660;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_020219509.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	975	1796	.	-	.	ID=gene-CYJ00_RS05665;Name=CYJ00_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05665;old_locus_tag=CYJ00_005670
NZ_PJUS02000205.1	Protein Homology	CDS	975	1796	.	-	0	ID=cds-WP_014614450.1;Parent=gene-CYJ00_RS05665;Dbxref=GenBank:WP_014614450.1;Name=WP_014614450.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276309.1;locus_tag=CYJ00_RS05665;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014614450.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	1816	2511	.	-	.	ID=gene-CYJ00_RS05670;Name=CYJ00_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05670;old_locus_tag=CYJ00_005675
NZ_PJUS02000205.1	Protein Homology	CDS	1816	2511	.	-	0	ID=cds-WP_014614451.1;Parent=gene-CYJ00_RS05670;Dbxref=GenBank:WP_014614451.1;Name=WP_014614451.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CYJ00_RS05670;product=methionine ABC transporter permease;protein_id=WP_014614451.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	2504	3532	.	-	.	ID=gene-CYJ00_RS05675;Name=CYJ00_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05675;old_locus_tag=CYJ00_005680
NZ_PJUS02000205.1	Protein Homology	CDS	2504	3532	.	-	0	ID=cds-WP_065520635.1;Parent=gene-CYJ00_RS05675;Dbxref=GenBank:WP_065520635.1;Name=WP_065520635.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006189870.1;locus_tag=CYJ00_RS05675;product=methionine ABC transporter ATP-binding protein;protein_id=WP_065520635.1;transl_table=11
NZ_PJUS02000205.1	cmsearch	riboswitch	3628	3737	.	-	.	ID=id-NZ_PJUS02000205.1:3628..3737;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000205.1	RefSeq	gene	3775	4092	.	-	.	ID=gene-CYJ00_RS05680;Name=CYJ00_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05680;old_locus_tag=CYJ00_005685
NZ_PJUS02000205.1	Protein Homology	CDS	3775	4092	.	-	0	ID=cds-WP_014614454.1;Parent=gene-CYJ00_RS05680;Dbxref=GenBank:WP_014614454.1;Name=WP_014614454.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=CYJ00_RS05680;product=thioredoxin family protein;protein_id=WP_014614454.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	4058	4453	.	-	.	ID=gene-CYJ00_RS05685;Name=CYJ00_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05685;old_locus_tag=CYJ00_005690
NZ_PJUS02000205.1	Protein Homology	CDS	4058	4453	.	-	0	ID=cds-WP_014614455.1;Parent=gene-CYJ00_RS05685;Dbxref=GenBank:WP_014614455.1;Name=WP_014614455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=CYJ00_RS05685;product=toprim domain-containing protein;protein_id=WP_014614455.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	4532	4912	.	-	.	ID=gene-CYJ00_RS05690;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CYJ00_RS05690;old_locus_tag=CYJ00_005695
NZ_PJUS02000205.1	Protein Homology	CDS	4532	4912	.	-	0	ID=cds-WP_014614456.1;Parent=gene-CYJ00_RS05690;Dbxref=GenBank:WP_014614456.1;Name=WP_014614456.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499390.1;locus_tag=CYJ00_RS05690;product=glycine cleavage system protein GcvH;protein_id=WP_014614456.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	4986	5342	.	-	.	ID=gene-CYJ00_RS05695;Name=CYJ00_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05695;old_locus_tag=CYJ00_005700
NZ_PJUS02000205.1	Protein Homology	CDS	4986	5342	.	-	0	ID=cds-WP_031253623.1;Parent=gene-CYJ00_RS05695;Dbxref=GenBank:WP_031253623.1;Name=WP_031253623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479305.1;locus_tag=CYJ00_RS05695;product=arsenate reductase family protein;protein_id=WP_031253623.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	5626	5946	.	+	.	ID=gene-CYJ00_RS05700;Name=CYJ00_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05700;old_locus_tag=CYJ00_005705
NZ_PJUS02000205.1	Protein Homology	CDS	5626	5946	.	+	0	ID=cds-WP_014614458.1;Parent=gene-CYJ00_RS05700;Dbxref=GenBank:WP_014614458.1;Name=WP_014614458.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168947.1;locus_tag=CYJ00_RS05700;product=thioredoxin family protein;protein_id=WP_014614458.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	6076	6621	.	-	.	ID=gene-CYJ00_RS05705;Name=CYJ00_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05705;old_locus_tag=CYJ00_005710
NZ_PJUS02000205.1	Protein Homology	CDS	6076	6621	.	-	0	ID=cds-WP_014614459.1;Parent=gene-CYJ00_RS05705;Dbxref=GenBank:WP_014614459.1;Name=WP_014614459.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614459.1;locus_tag=CYJ00_RS05705;product=nitroreductase family protein;protein_id=WP_014614459.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	6676	7401	.	-	.	ID=gene-CYJ00_RS05710;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CYJ00_RS05710;old_locus_tag=CYJ00_005715
NZ_PJUS02000205.1	Protein Homology	CDS	6676	7401	.	-	0	ID=cds-WP_096533925.1;Parent=gene-CYJ00_RS05710;Dbxref=GenBank:WP_096533925.1;Name=WP_096533925.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=CYJ00_RS05710;product=type I 3-dehydroquinate dehydratase;protein_id=WP_096533925.1;transl_table=11
NZ_PJUS02000205.1	RefSeq	gene	7422	8426	.	-	.	ID=gene-CYJ00_RS05715;Name=CYJ00_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05715;old_locus_tag=CYJ00_005720
NZ_PJUS02000205.1	Protein Homology	CDS	7422	8426	.	-	0	ID=cds-WP_101457832.1;Parent=gene-CYJ00_RS05715;Dbxref=GenBank:WP_101457832.1;Name=WP_101457832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614461.1;locus_tag=CYJ00_RS05715;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_101457832.1;transl_table=11
##sequence-region NZ_PJUS02000296.1 1 7082
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000296.1	RefSeq	region	1	7082	.	+	.	ID=NZ_PJUS02000296.1:1..7082;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000296.1	RefSeq	gene	261	1178	.	-	.	ID=gene-CYJ00_RS07840;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=CYJ00_RS07840;old_locus_tag=CYJ00_007845
NZ_PJUS02000296.1	Protein Homology	CDS	261	1178	.	-	0	ID=cds-WP_037544291.1;Parent=gene-CYJ00_RS07840;Dbxref=GenBank:WP_037544291.1;Name=WP_037544291.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501435.1;locus_tag=CYJ00_RS07840;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037544291.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	1178	2017	.	-	.	ID=gene-CYJ00_RS07845;Name=CYJ00_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07845;old_locus_tag=CYJ00_007850
NZ_PJUS02000296.1	Protein Homology	CDS	1178	2017	.	-	0	ID=cds-WP_014614643.1;Parent=gene-CYJ00_RS07845;Dbxref=GenBank:WP_014614643.1;Name=WP_014614643.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=CYJ00_RS07845;product=metal ABC transporter permease;protein_id=WP_014614643.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	1992	2768	.	-	.	ID=gene-CYJ00_RS07850;Name=CYJ00_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07850;old_locus_tag=CYJ00_007855
NZ_PJUS02000296.1	Protein Homology	CDS	1992	2768	.	-	0	ID=cds-WP_014614642.1;Parent=gene-CYJ00_RS07850;Dbxref=GenBank:WP_014614642.1;Name=WP_014614642.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167322.1;locus_tag=CYJ00_RS07850;product=metal ABC transporter ATP-binding protein;protein_id=WP_014614642.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	2890	3537	.	+	.	ID=gene-CYJ00_RS07855;Name=CYJ00_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07855;old_locus_tag=CYJ00_007860
NZ_PJUS02000296.1	Protein Homology	CDS	2890	3537	.	+	0	ID=cds-WP_014614641.1;Parent=gene-CYJ00_RS07855;Dbxref=GenBank:WP_014614641.1;Name=WP_014614641.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220035.1;locus_tag=CYJ00_RS07855;product=metal-dependent transcriptional regulator;protein_id=WP_014614641.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	3933	4931	.	-	.	ID=gene-CYJ00_RS07860;Name=CYJ00_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07860;old_locus_tag=CYJ00_007865
NZ_PJUS02000296.1	Protein Homology	CDS	3933	4931	.	-	0	ID=cds-WP_101457833.1;Parent=gene-CYJ00_RS07860;Dbxref=GenBank:WP_101457833.1;Name=WP_101457833.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728687.1;locus_tag=CYJ00_RS07860;product=FecCD family ABC transporter permease;protein_id=WP_101457833.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	4928	5923	.	-	.	ID=gene-CYJ00_RS07865;Name=CYJ00_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07865;old_locus_tag=CYJ00_007870
NZ_PJUS02000296.1	Protein Homology	CDS	4928	5923	.	-	0	ID=cds-WP_096636569.1;Parent=gene-CYJ00_RS07865;Dbxref=GenBank:WP_096636569.1;Name=WP_096636569.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580228.1;locus_tag=CYJ00_RS07865;product=FecCD family ABC transporter permease;protein_id=WP_096636569.1;transl_table=11
NZ_PJUS02000296.1	RefSeq	gene	5940	6923	.	-	.	ID=gene-CYJ00_RS07870;Name=CYJ00_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07870;old_locus_tag=CYJ00_007875
NZ_PJUS02000296.1	Protein Homology	CDS	5940	6923	.	-	0	ID=cds-WP_015728689.1;Parent=gene-CYJ00_RS07870;Dbxref=GenBank:WP_015728689.1;Name=WP_015728689.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728689.1;locus_tag=CYJ00_RS07870;product=ABC transporter substrate-binding protein;protein_id=WP_015728689.1;transl_table=11
##sequence-region NZ_PJUS02000395.1 1 6393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000395.1	RefSeq	region	1	6393	.	+	.	ID=NZ_PJUS02000395.1:1..6393;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000395.1	RefSeq	gene	240	1445	.	-	.	ID=gene-CYJ00_RS11575;Name=CYJ00_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11575;old_locus_tag=CYJ00_011580
NZ_PJUS02000395.1	Protein Homology	CDS	240	1445	.	-	0	ID=cds-WP_014614780.1;Parent=gene-CYJ00_RS11575;Dbxref=GenBank:WP_014614780.1;Name=WP_014614780.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CYJ00_RS11575;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014614780.1;transl_table=11
NZ_PJUS02000395.1	RefSeq	gene	1610	2071	.	+	.	ID=gene-CYJ00_RS11580;Name=CYJ00_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11580;old_locus_tag=CYJ00_011585
NZ_PJUS02000395.1	Protein Homology	CDS	1610	2071	.	+	0	ID=cds-WP_014614779.1;Parent=gene-CYJ00_RS11580;Dbxref=GenBank:WP_014614779.1;Name=WP_014614779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CYJ00_RS11580;product=CtsR family transcriptional regulator;protein_id=WP_014614779.1;transl_table=11
NZ_PJUS02000395.1	RefSeq	gene	2085	2615	.	+	.	ID=gene-CYJ00_RS11585;Name=CYJ00_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11585;old_locus_tag=CYJ00_011590
NZ_PJUS02000395.1	Protein Homology	CDS	2085	2615	.	+	0	ID=cds-WP_063284842.1;Parent=gene-CYJ00_RS11585;Dbxref=GenBank:WP_063284842.1;Name=WP_063284842.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169091.1;locus_tag=CYJ00_RS11585;product=UvrB/UvrC motif-containing protein;protein_id=WP_063284842.1;transl_table=11
NZ_PJUS02000395.1	RefSeq	gene	2605	3609	.	+	.	ID=gene-CYJ00_RS11590;Name=CYJ00_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11590;old_locus_tag=CYJ00_011595
NZ_PJUS02000395.1	Protein Homology	CDS	2605	3609	.	+	0	ID=cds-WP_015728601.1;Parent=gene-CYJ00_RS11590;Dbxref=GenBank:WP_015728601.1;Name=WP_015728601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169090.1;locus_tag=CYJ00_RS11590;product=protein arginine kinase;protein_id=WP_015728601.1;transl_table=11
NZ_PJUS02000395.1	RefSeq	gene	3625	6084	.	+	.	ID=gene-CYJ00_RS11595;Name=CYJ00_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11595;old_locus_tag=CYJ00_011600
NZ_PJUS02000395.1	Protein Homology	CDS	3625	6084	.	+	0	ID=cds-WP_014614776.1;Parent=gene-CYJ00_RS11595;Dbxref=GenBank:WP_014614776.1;Name=WP_014614776.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499078.1;locus_tag=CYJ00_RS11595;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_014614776.1;transl_table=11
##sequence-region NZ_PJUS02000162.1 1 5993
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000162.1	RefSeq	region	1	5993	.	+	.	ID=NZ_PJUS02000162.1:1..5993;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000162.1	RefSeq	gene	1	478	.	-	.	ID=gene-CYJ00_RS04575;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04575;old_locus_tag=CYJ00_004580;partial=true;start_range=.,1
NZ_PJUS02000162.1	Protein Homology	CDS	1	478	.	-	0	ID=cds-WP_101457834.1;Parent=gene-CYJ00_RS04575;Dbxref=GenBank:WP_101457834.1;Name=WP_101457834.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612882.1;locus_tag=CYJ00_RS04575;partial=true;product=signal peptidase I;protein_id=WP_101457834.1;start_range=.,1;transl_table=11
NZ_PJUS02000162.1	RefSeq	gene	587	1135	.	-	.	ID=gene-CYJ00_RS04580;Name=CYJ00_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04580;old_locus_tag=CYJ00_004585
NZ_PJUS02000162.1	Protein Homology	CDS	587	1135	.	-	0	ID=cds-WP_014612881.1;Parent=gene-CYJ00_RS04580;Dbxref=GenBank:WP_014612881.1;Name=WP_014612881.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168425.1;locus_tag=CYJ00_RS04580;product=helix-turn-helix domain-containing protein;protein_id=WP_014612881.1;transl_table=11
NZ_PJUS02000162.1	RefSeq	gene	1244	2422	.	+	.	ID=gene-CYJ00_RS04585;Name=CYJ00_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04585;old_locus_tag=CYJ00_004590
NZ_PJUS02000162.1	Protein Homology	CDS	1244	2422	.	+	0	ID=cds-WP_063278624.1;Parent=gene-CYJ00_RS04585;Dbxref=GenBank:WP_063278624.1;Name=WP_063278624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612880.1;locus_tag=CYJ00_RS04585;product=CynX/NimT family MFS transporter;protein_id=WP_063278624.1;transl_table=11
NZ_PJUS02000162.1	RefSeq	gene	2576	3586	.	-	.	ID=gene-CYJ00_RS04590;Name=CYJ00_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04590;old_locus_tag=CYJ00_004595
NZ_PJUS02000162.1	Protein Homology	CDS	2576	3586	.	-	0	ID=cds-WP_096536242.1;Parent=gene-CYJ00_RS04590;Dbxref=GenBank:WP_096536242.1;Name=WP_096536242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729703.1;locus_tag=CYJ00_RS04590;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_096536242.1;transl_table=11
NZ_PJUS02000162.1	RefSeq	gene	3800	5536	.	-	.	ID=gene-CYJ00_RS04595;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04595;old_locus_tag=CYJ00_004600
NZ_PJUS02000162.1	Protein Homology	CDS	3800	5536	.	-	0	ID=cds-WP_014612878.1;Parent=gene-CYJ00_RS04595;Dbxref=GenBank:WP_014612878.1;Name=WP_014612878.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=CYJ00_RS04595;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_014612878.1;transl_table=11
NZ_PJUS02000162.1	cmsearch	riboswitch	5733	5836	.	-	.	ID=id-NZ_PJUS02000162.1:5733..5836;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
##sequence-region NZ_PJUS02000274.1 1 6177
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000274.1	RefSeq	region	1	6177	.	+	.	ID=NZ_PJUS02000274.1:1..6177;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000274.1	RefSeq	pseudogene	1	149	.	-	.	ID=gene-CYJ00_RS13605;Name=CYJ00_RS13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13605;old_locus_tag=CYJ00_007370;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000274.1	Protein Homology	CDS	1	149	.	-	0	ID=cds-CYJ00_RS13605;Parent=gene-CYJ00_RS13605;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275995.1;locus_tag=CYJ00_RS13605;partial=true;product=orotidine-5'-phosphate decarboxylase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000274.1	RefSeq	gene	151	1071	.	-	.	ID=gene-CYJ00_RS07370;Name=CYJ00_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07370;old_locus_tag=CYJ00_007375
NZ_PJUS02000274.1	Protein Homology	CDS	151	1071	.	-	0	ID=cds-WP_014614152.1;Parent=gene-CYJ00_RS07370;Dbxref=GenBank:WP_014614152.1;Name=WP_014614152.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=CYJ00_RS07370;product=dihydroorotate dehydrogenase;protein_id=WP_014614152.1;transl_table=11
NZ_PJUS02000274.1	RefSeq	gene	1068	1832	.	-	.	ID=gene-CYJ00_RS07375;Name=CYJ00_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07375;old_locus_tag=CYJ00_007380
NZ_PJUS02000274.1	Protein Homology	CDS	1068	1832	.	-	0	ID=cds-WP_014614153.1;Parent=gene-CYJ00_RS07375;Dbxref=GenBank:WP_014614153.1;Name=WP_014614153.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=CYJ00_RS07375;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_014614153.1;transl_table=11
NZ_PJUS02000274.1	RefSeq	gene	1846	5019	.	-	.	ID=gene-CYJ00_RS07380;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07380;old_locus_tag=CYJ00_007385
NZ_PJUS02000274.1	Protein Homology	CDS	1846	5019	.	-	0	ID=cds-WP_014614154.1;Parent=gene-CYJ00_RS07380;Dbxref=GenBank:WP_014614154.1;Name=WP_014614154.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=CYJ00_RS07380;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_014614154.1;transl_table=11
NZ_PJUS02000274.1	RefSeq	gene	5012	6112	.	-	.	ID=gene-CYJ00_RS07385;Name=CYJ00_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07385;old_locus_tag=CYJ00_007390
NZ_PJUS02000274.1	Protein Homology	CDS	5012	6112	.	-	0	ID=cds-WP_014614155.1;Parent=gene-CYJ00_RS07385;Dbxref=GenBank:WP_014614155.1;Name=WP_014614155.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=CYJ00_RS07385;product=carbamoyl phosphate synthase small subunit;protein_id=WP_014614155.1;transl_table=11
##sequence-region NZ_PJUS02000079.1 1 8110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000079.1	RefSeq	region	1	8110	.	+	.	ID=NZ_PJUS02000079.1:1..8110;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000079.1	RefSeq	gene	1	2366	.	+	.	ID=gene-CYJ00_RS02160;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02160;old_locus_tag=CYJ00_002160;partial=true;start_range=.,1
NZ_PJUS02000079.1	Protein Homology	CDS	1	2366	.	+	2	ID=cds-WP_101457835.1;Parent=gene-CYJ00_RS02160;Dbxref=GenBank:WP_101457835.1;Name=WP_101457835.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=CYJ00_RS02160;partial=true;product=DNA polymerase I;protein_id=WP_101457835.1;start_range=.,1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	2386	3258	.	+	.	ID=gene-CYJ00_RS02165;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CYJ00_RS02165;old_locus_tag=CYJ00_002165
NZ_PJUS02000079.1	Protein Homology	CDS	2386	3258	.	+	0	ID=cds-WP_063284416.1;Parent=gene-CYJ00_RS02165;Dbxref=GenBank:WP_063284416.1;Name=WP_063284416.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=CYJ00_RS02165;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_063284416.1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	3272	3895	.	+	.	ID=gene-CYJ00_RS02170;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CYJ00_RS02170;old_locus_tag=CYJ00_002170
NZ_PJUS02000079.1	Protein Homology	CDS	3272	3895	.	+	0	ID=cds-WP_014613685.1;Parent=gene-CYJ00_RS02170;Dbxref=GenBank:WP_014613685.1;Name=WP_014613685.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613685.1;locus_tag=CYJ00_RS02170;product=dephospho-CoA kinase;protein_id=WP_014613685.1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	4102	5118	.	+	.	ID=gene-CYJ00_RS02175;Name=CYJ00_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02175;old_locus_tag=CYJ00_002175
NZ_PJUS02000079.1	Protein Homology	CDS	4102	5118	.	+	0	ID=cds-WP_037542830.1;Parent=gene-CYJ00_RS02175;Dbxref=GenBank:WP_037542830.1;Name=WP_037542830.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=CYJ00_RS02175;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037542830.1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	5315	5782	.	+	.	ID=gene-CYJ00_RS02180;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CYJ00_RS02180;old_locus_tag=CYJ00_002180
NZ_PJUS02000079.1	Protein Homology	CDS	5315	5782	.	+	0	ID=cds-WP_014613687.1;Parent=gene-CYJ00_RS02180;Dbxref=GenBank:WP_014613687.1;Name=WP_014613687.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=CYJ00_RS02180;product=transcriptional regulator NrdR;protein_id=WP_014613687.1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	5786	7159	.	+	.	ID=gene-CYJ00_RS02185;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02185;old_locus_tag=CYJ00_002185
NZ_PJUS02000079.1	Protein Homology	CDS	5786	7159	.	+	0	ID=cds-WP_015729291.1;Parent=gene-CYJ00_RS02185;Dbxref=GenBank:WP_015729291.1;Name=WP_015729291.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=CYJ00_RS02185;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_015729291.1;transl_table=11
NZ_PJUS02000079.1	RefSeq	gene	7159	8082	.	+	.	ID=gene-CYJ00_RS02190;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=CYJ00_RS02190;old_locus_tag=CYJ00_002190
NZ_PJUS02000079.1	Protein Homology	CDS	7159	8082	.	+	0	ID=cds-WP_014613689.1;Parent=gene-CYJ00_RS02190;Dbxref=GenBank:WP_014613689.1;Name=WP_014613689.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670575.1;locus_tag=CYJ00_RS02190;product=primosomal protein DnaI;protein_id=WP_014613689.1;transl_table=11
##sequence-region NZ_PJUS02000351.1 1 5156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000351.1	RefSeq	region	1	5156	.	+	.	ID=NZ_PJUS02000351.1:1..5156;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000351.1	RefSeq	gene	92	2065	.	+	.	ID=gene-CYJ00_RS10685;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CYJ00_RS10685;old_locus_tag=CYJ00_010690
NZ_PJUS02000351.1	Protein Homology	CDS	92	2065	.	+	0	ID=cds-WP_101457836.1;Parent=gene-CYJ00_RS10685;Dbxref=GenBank:WP_101457836.1;Name=WP_101457836.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=CYJ00_RS10685;product=methionine--tRNA ligase;protein_id=WP_101457836.1;transl_table=11
NZ_PJUS02000351.1	RefSeq	gene	2509	3276	.	+	.	ID=gene-CYJ00_RS10690;Name=CYJ00_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10690;old_locus_tag=CYJ00_010695
NZ_PJUS02000351.1	Protein Homology	CDS	2509	3276	.	+	0	ID=cds-WP_015728591.1;Parent=gene-CYJ00_RS10690;Dbxref=GenBank:WP_015728591.1;Name=WP_015728591.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614814.1;locus_tag=CYJ00_RS10690;product=TatD family hydrolase;protein_id=WP_015728591.1;transl_table=11
NZ_PJUS02000351.1	RefSeq	gene	3316	3855	.	+	.	ID=gene-CYJ00_RS10695;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CYJ00_RS10695;old_locus_tag=CYJ00_010700
NZ_PJUS02000351.1	Protein Homology	CDS	3316	3855	.	+	0	ID=cds-WP_014614813.1;Parent=gene-CYJ00_RS10695;Dbxref=GenBank:WP_014614813.1;Name=WP_014614813.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=CYJ00_RS10695;product=ribonuclease M5;protein_id=WP_014614813.1;transl_table=11
NZ_PJUS02000351.1	RefSeq	gene	3860	4750	.	+	.	ID=gene-CYJ00_RS10700;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10700;old_locus_tag=CYJ00_010705
NZ_PJUS02000351.1	Protein Homology	CDS	3860	4750	.	+	0	ID=cds-WP_014614812.1;Parent=gene-CYJ00_RS10700;Dbxref=GenBank:WP_014614812.1;Name=WP_014614812.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=CYJ00_RS10700;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_014614812.1;transl_table=11
NZ_PJUS02000351.1	RefSeq	gene	4850	5116	.	+	.	ID=gene-CYJ00_RS10705;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=CYJ00_RS10705;old_locus_tag=CYJ00_010710
NZ_PJUS02000351.1	Protein Homology	CDS	4850	5116	.	+	0	ID=cds-WP_014614811.1;Parent=gene-CYJ00_RS10705;Dbxref=GenBank:WP_014614811.1;Name=WP_014614811.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=CYJ00_RS10705;product=biofilm formation stimulator Veg;protein_id=WP_014614811.1;transl_table=11
##sequence-region NZ_PJUS02000273.1 1 9462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000273.1	RefSeq	region	1	9462	.	+	.	ID=NZ_PJUS02000273.1:1..9462;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000273.1	RefSeq	gene	572	1036	.	+	.	ID=gene-CYJ00_RS07330;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07330;old_locus_tag=CYJ00_007335
NZ_PJUS02000273.1	Protein Homology	CDS	572	1036	.	+	0	ID=cds-WP_014613542.1;Parent=gene-CYJ00_RS07330;Dbxref=GenBank:WP_014613542.1;Name=WP_014613542.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=CYJ00_RS07330;product=XRE family transcriptional regulator XdrA;protein_id=WP_014613542.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	1261	2391	.	+	.	ID=gene-CYJ00_RS07335;Name=CYJ00_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07335;old_locus_tag=CYJ00_007340
NZ_PJUS02000273.1	Protein Homology	CDS	1261	2391	.	+	0	ID=cds-WP_063284461.1;Parent=gene-CYJ00_RS07335;Dbxref=GenBank:WP_063284461.1;Name=WP_063284461.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168012.1;locus_tag=CYJ00_RS07335;product=DUF445 domain-containing protein;protein_id=WP_063284461.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	2480	2824	.	+	.	ID=gene-CYJ00_RS07340;Name=CYJ00_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07340;old_locus_tag=CYJ00_007345
NZ_PJUS02000273.1	Protein Homology	CDS	2480	2824	.	+	0	ID=cds-WP_014613544.1;Parent=gene-CYJ00_RS07340;Dbxref=GenBank:WP_014613544.1;Name=WP_014613544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CYJ00_RS07340;product=YlbF/YmcA family competence regulator;protein_id=WP_014613544.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	3078	4271	.	+	.	ID=gene-CYJ00_RS07345;Name=CYJ00_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07345;old_locus_tag=CYJ00_007350
NZ_PJUS02000273.1	Protein Homology	CDS	3078	4271	.	+	0	ID=cds-WP_101457837.1;Parent=gene-CYJ00_RS07345;Dbxref=GenBank:WP_101457837.1;Name=WP_101457837.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015581881.1;locus_tag=CYJ00_RS07345;product=metallophosphoesterase family protein;protein_id=WP_101457837.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	4268	7192	.	+	.	ID=gene-CYJ00_RS07350;Name=CYJ00_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07350;old_locus_tag=CYJ00_007355
NZ_PJUS02000273.1	Protein Homology	CDS	4268	7192	.	+	0	ID=cds-WP_015729362.1;Parent=gene-CYJ00_RS07350;Dbxref=GenBank:WP_015729362.1;Name=WP_015729362.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=CYJ00_RS07350;product=AAA family ATPase;protein_id=WP_015729362.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	7211	8152	.	+	.	ID=gene-CYJ00_RS07355;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=CYJ00_RS07355;old_locus_tag=CYJ00_007360
NZ_PJUS02000273.1	Protein Homology	CDS	7211	8152	.	+	0	ID=cds-WP_014613547.1;Parent=gene-CYJ00_RS07355;Dbxref=GenBank:WP_014613547.1;Name=WP_014613547.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CYJ00_RS07355;product=3'-5' exoribonuclease YhaM;protein_id=WP_014613547.1;transl_table=11
NZ_PJUS02000273.1	RefSeq	gene	8362	9318	.	-	.	ID=gene-CYJ00_RS07360;Name=CYJ00_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07360;old_locus_tag=CYJ00_007365
NZ_PJUS02000273.1	Protein Homology	CDS	8362	9318	.	-	0	ID=cds-WP_014613548.1;Parent=gene-CYJ00_RS07360;Dbxref=GenBank:WP_014613548.1;Name=WP_014613548.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168017.1;locus_tag=CYJ00_RS07360;product=peptidylprolyl isomerase;protein_id=WP_014613548.1;transl_table=11
##sequence-region NZ_PJUS02000267.1 1 17126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000267.1	RefSeq	region	1	17126	.	+	.	ID=NZ_PJUS02000267.1:1..17126;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000267.1	RefSeq	gene	1	681	.	+	.	ID=gene-CYJ00_RS07160;Name=CYJ00_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07160;old_locus_tag=CYJ00_007165;partial=true;start_range=.,1
NZ_PJUS02000267.1	Protein Homology	CDS	1	681	.	+	0	ID=cds-WP_101457663.1;Parent=gene-CYJ00_RS07160;Dbxref=GenBank:WP_101457663.1;Name=WP_101457663.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612756.1;locus_tag=CYJ00_RS07160;partial=true;product=GntR family transcriptional regulator;protein_id=WP_101457663.1;start_range=.,1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	710	1825	.	+	.	ID=gene-CYJ00_RS07165;Name=CYJ00_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07165;old_locus_tag=CYJ00_007170
NZ_PJUS02000267.1	Protein Homology	CDS	710	1825	.	+	0	ID=cds-WP_065353941.1;Parent=gene-CYJ00_RS07165;Dbxref=GenBank:WP_065353941.1;Name=WP_065353941.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166802.1;locus_tag=CYJ00_RS07165;product=SIS domain-containing protein;protein_id=WP_065353941.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	1832	2770	.	+	.	ID=gene-CYJ00_RS07170;Name=CYJ00_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07170;old_locus_tag=CYJ00_007175
NZ_PJUS02000267.1	Protein Homology	CDS	1832	2770	.	+	0	ID=cds-WP_014612758.1;Parent=gene-CYJ00_RS07170;Dbxref=GenBank:WP_014612758.1;Name=WP_014612758.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168840.1;locus_tag=CYJ00_RS07170;product=1-phosphofructokinase family hexose kinase;protein_id=WP_014612758.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	2764	3705	.	+	.	ID=gene-CYJ00_RS07175;Name=CYJ00_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07175;old_locus_tag=CYJ00_007180
NZ_PJUS02000267.1	Protein Homology	CDS	2764	3705	.	+	0	ID=cds-WP_014612759.1;Parent=gene-CYJ00_RS07175;Dbxref=GenBank:WP_014612759.1;Name=WP_014612759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612759.1;locus_tag=CYJ00_RS07175;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_014612759.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	3718	5490	.	+	.	ID=gene-CYJ00_RS07180;Name=CYJ00_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07180;old_locus_tag=CYJ00_007185
NZ_PJUS02000267.1	Protein Homology	CDS	3718	5490	.	+	0	ID=cds-WP_020219968.1;Parent=gene-CYJ00_RS07180;Dbxref=GenBank:WP_020219968.1;Name=WP_020219968.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166805.1;locus_tag=CYJ00_RS07180;product=glycoside hydrolase family 35 protein;protein_id=WP_020219968.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	5505	5984	.	+	.	ID=gene-CYJ00_RS07185;Name=CYJ00_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07185;old_locus_tag=CYJ00_007190
NZ_PJUS02000267.1	Protein Homology	CDS	5505	5984	.	+	0	ID=cds-WP_014612761.1;Parent=gene-CYJ00_RS07185;Dbxref=GenBank:WP_014612761.1;Name=WP_014612761.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=CYJ00_RS07185;product=PTS sugar transporter subunit IIB;protein_id=WP_014612761.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	6006	6905	.	+	.	ID=gene-CYJ00_RS07190;Name=CYJ00_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07190;old_locus_tag=CYJ00_007195
NZ_PJUS02000267.1	Protein Homology	CDS	6006	6905	.	+	0	ID=cds-WP_014612762.1;Parent=gene-CYJ00_RS07190;Dbxref=GenBank:WP_014612762.1;Name=WP_014612762.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=CYJ00_RS07190;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_014612762.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	6892	7776	.	+	.	ID=gene-CYJ00_RS07195;Name=CYJ00_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07195;old_locus_tag=CYJ00_007200
NZ_PJUS02000267.1	Protein Homology	CDS	6892	7776	.	+	0	ID=cds-WP_014612763.1;Parent=gene-CYJ00_RS07195;Dbxref=GenBank:WP_014612763.1;Name=WP_014612763.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=CYJ00_RS07195;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014612763.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	7798	8199	.	+	.	ID=gene-CYJ00_RS07200;Name=CYJ00_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07200;old_locus_tag=CYJ00_007205
NZ_PJUS02000267.1	Protein Homology	CDS	7798	8199	.	+	0	ID=cds-WP_020219969.1;Parent=gene-CYJ00_RS07200;Dbxref=GenBank:WP_020219969.1;Name=WP_020219969.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612764.1;locus_tag=CYJ00_RS07200;product=PTS sugar transporter subunit IIA;protein_id=WP_020219969.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	8231	9385	.	+	.	ID=gene-CYJ00_RS07205;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07205;old_locus_tag=CYJ00_007210
NZ_PJUS02000267.1	Protein Homology	CDS	8231	9385	.	+	0	ID=cds-WP_096533291.1;Parent=gene-CYJ00_RS07205;Dbxref=GenBank:WP_096533291.1;Name=WP_096533291.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612765.1;locus_tag=CYJ00_RS07205;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_096533291.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	9572	10087	.	-	.	ID=gene-CYJ00_RS07210;Name=CYJ00_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07210;old_locus_tag=CYJ00_007215
NZ_PJUS02000267.1	Protein Homology	CDS	9572	10087	.	-	0	ID=cds-WP_014612766.1;Parent=gene-CYJ00_RS07210;Dbxref=GenBank:WP_014612766.1;Name=WP_014612766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446907.1;locus_tag=CYJ00_RS07210;product=YceI family protein;protein_id=WP_014612766.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	10486	12546	.	+	.	ID=gene-CYJ00_RS07215;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ00_RS07215;old_locus_tag=CYJ00_007220
NZ_PJUS02000267.1	Protein Homology	CDS	10486	12546	.	+	0	ID=cds-WP_096538175.1;Parent=gene-CYJ00_RS07215;Dbxref=GenBank:WP_096538175.1;Name=WP_096538175.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166817.1;locus_tag=CYJ00_RS07215;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_096538175.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	12987	13919	.	+	.	ID=gene-CYJ00_RS07220;Name=CYJ00_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07220;old_locus_tag=CYJ00_007225
NZ_PJUS02000267.1	Protein Homology	CDS	12987	13919	.	+	0	ID=cds-WP_014612768.1;Parent=gene-CYJ00_RS07220;Dbxref=GenBank:WP_014612768.1;Name=WP_014612768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612768.1;locus_tag=CYJ00_RS07220;product=lactate/malate family dehydrogenase;protein_id=WP_014612768.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	13954	15312	.	+	.	ID=gene-CYJ00_RS07225;Name=CYJ00_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07225;old_locus_tag=CYJ00_007230
NZ_PJUS02000267.1	Protein Homology	CDS	13954	15312	.	+	0	ID=cds-WP_198597689.1;Parent=gene-CYJ00_RS07225;Dbxref=GenBank:WP_198597689.1;Name=WP_198597689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166820.1;locus_tag=CYJ00_RS07225;product=YjiH family protein;protein_id=WP_198597689.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	15343	16110	.	+	.	ID=gene-CYJ00_RS07230;Name=CYJ00_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07230;old_locus_tag=CYJ00_007235
NZ_PJUS02000267.1	Protein Homology	CDS	15343	16110	.	+	0	ID=cds-WP_014612770.1;Parent=gene-CYJ00_RS07230;Dbxref=GenBank:WP_014612770.1;Name=WP_014612770.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612770.1;locus_tag=CYJ00_RS07230;product=IclR family transcriptional regulator;protein_id=WP_014612770.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	16370	16573	.	+	.	ID=gene-CYJ00_RS07235;Name=CYJ00_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07235;old_locus_tag=CYJ00_007240
NZ_PJUS02000267.1	Protein Homology	CDS	16370	16573	.	+	0	ID=cds-WP_014612771.1;Parent=gene-CYJ00_RS07235;Dbxref=GenBank:WP_014612771.1;Name=WP_014612771.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=CYJ00_RS07235;product=helix-turn-helix transcriptional regulator;protein_id=WP_014612771.1;transl_table=11
NZ_PJUS02000267.1	RefSeq	gene	16570	17126	.	+	.	ID=gene-CYJ00_RS07240;Name=CYJ00_RS07240;end_range=17126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07240;old_locus_tag=CYJ00_007245;partial=true
NZ_PJUS02000267.1	Protein Homology	CDS	16570	17126	.	+	0	ID=cds-WP_101457665.1;Parent=gene-CYJ00_RS07240;Dbxref=GenBank:WP_101457665.1;Name=WP_101457665.1;end_range=17126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612772.1;locus_tag=CYJ00_RS07240;partial=true;product=DUF3169 family protein;protein_id=WP_101457665.1;transl_table=11
##sequence-region NZ_PJUS02000169.1 1 6943
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000169.1	RefSeq	region	1	6943	.	+	.	ID=NZ_PJUS02000169.1:1..6943;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000169.1	RefSeq	gene	640	786	.	-	.	ID=gene-CYJ00_RS13225;Name=CYJ00_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13225
NZ_PJUS02000169.1	Protein Homology	CDS	640	786	.	-	0	ID=cds-WP_014613367.1;Parent=gene-CYJ00_RS13225;Dbxref=GenBank:WP_014613367.1;Name=WP_014613367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613367.1;locus_tag=CYJ00_RS13225;product=Lmo0850 family protein;protein_id=WP_014613367.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	872	3052	.	-	.	ID=gene-CYJ00_RS04760;Name=CYJ00_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04760;old_locus_tag=CYJ00_004765
NZ_PJUS02000169.1	Protein Homology	CDS	872	3052	.	-	0	ID=cds-WP_063279127.1;Parent=gene-CYJ00_RS04760;Dbxref=GenBank:WP_063279127.1;Name=WP_063279127.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165821.1;locus_tag=CYJ00_RS04760;product=heavy metal translocating P-type ATPase;protein_id=WP_063279127.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	3153	3359	.	-	.	ID=gene-CYJ00_RS04765;Name=CYJ00_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04765;old_locus_tag=CYJ00_004770
NZ_PJUS02000169.1	Protein Homology	CDS	3153	3359	.	-	0	ID=cds-WP_014613365.1;Parent=gene-CYJ00_RS04765;Dbxref=GenBank:WP_014613365.1;Name=WP_014613365.1;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613365.1;locus_tag=CYJ00_RS04765;product=cation transporter;protein_id=WP_014613365.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	3363	3584	.	-	.	ID=gene-CYJ00_RS04770;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS04770;old_locus_tag=CYJ00_004775
NZ_PJUS02000169.1	Protein Homology	CDS	3363	3584	.	-	0	ID=cds-WP_014613364.1;Parent=gene-CYJ00_RS04770;Dbxref=GenBank:WP_014613364.1;Name=WP_014613364.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613364.1;locus_tag=CYJ00_RS04770;product=putative copper chaperone CsoZ;protein_id=WP_014613364.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	3597	3884	.	-	.	ID=gene-CYJ00_RS04775;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=CYJ00_RS04775;old_locus_tag=CYJ00_004780
NZ_PJUS02000169.1	Protein Homology	CDS	3597	3884	.	-	0	ID=cds-WP_014613363.1;Parent=gene-CYJ00_RS04775;Dbxref=GenBank:WP_014613363.1;Name=WP_014613363.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500801.1;locus_tag=CYJ00_RS04775;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_014613363.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	4016	5506	.	+	.	ID=gene-CYJ00_RS04780;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ00_RS04780;old_locus_tag=CYJ00_004785
NZ_PJUS02000169.1	Protein Homology	CDS	4016	5506	.	+	0	ID=cds-WP_099986639.1;Parent=gene-CYJ00_RS04780;Dbxref=GenBank:WP_099986639.1;Name=WP_099986639.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=CYJ00_RS04780;product=cardiolipin synthase;protein_id=WP_099986639.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	5527	6183	.	+	.	ID=gene-CYJ00_RS04785;Name=CYJ00_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04785;old_locus_tag=CYJ00_004790
NZ_PJUS02000169.1	Protein Homology	CDS	5527	6183	.	+	0	ID=cds-WP_014613361.1;Parent=gene-CYJ00_RS04785;Dbxref=GenBank:WP_014613361.1;Name=WP_014613361.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165816.1;locus_tag=CYJ00_RS04785;product=HD domain-containing protein;protein_id=WP_014613361.1;transl_table=11
NZ_PJUS02000169.1	RefSeq	gene	6237	6943	.	-	.	ID=gene-CYJ00_RS04790;Name=yidC;end_range=6943,.;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04790;old_locus_tag=CYJ00_004795;partial=true
NZ_PJUS02000169.1	Protein Homology	CDS	6237	6943	.	-	2	ID=cds-WP_101457838.1;Parent=gene-CYJ00_RS04790;Dbxref=GenBank:WP_101457838.1;Name=WP_101457838.1;Ontology_term=GO:0051205,GO:0016020;end_range=6943,.;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729433.1;locus_tag=CYJ00_RS04790;partial=true;product=membrane protein insertase YidC;protein_id=WP_101457838.1;transl_table=11
##sequence-region NZ_PJUS02000382.1 1 8033
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000382.1	RefSeq	region	1	8033	.	+	.	ID=NZ_PJUS02000382.1:1..8033;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000382.1	RefSeq	gene	1	751	.	-	.	ID=gene-CYJ00_RS11315;Name=CYJ00_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11315;old_locus_tag=CYJ00_011320;partial=true;start_range=.,1
NZ_PJUS02000382.1	Protein Homology	CDS	1	751	.	-	0	ID=cds-WP_101457839.1;Parent=gene-CYJ00_RS11315;Dbxref=GenBank:WP_101457839.1;Name=WP_101457839.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500243.1;locus_tag=CYJ00_RS11315;partial=true;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_101457839.1;start_range=.,1;transl_table=11
NZ_PJUS02000382.1	RefSeq	gene	834	1026	.	-	.	ID=gene-CYJ00_RS11320;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CYJ00_RS11320;old_locus_tag=CYJ00_011325
NZ_PJUS02000382.1	cmsearch	ncRNA	834	1026	.	-	.	ID=rna-CYJ00_RS11320;Parent=gene-CYJ00_RS11320;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS11320;product=6S RNA
NZ_PJUS02000382.1	cmsearch	exon	834	1026	.	-	.	ID=exon-CYJ00_RS11320-1;Parent=rna-CYJ00_RS11320;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS11320;product=6S RNA
NZ_PJUS02000382.1	RefSeq	gene	1097	2863	.	-	.	ID=gene-CYJ00_RS11325;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CYJ00_RS11325;old_locus_tag=CYJ00_011330
NZ_PJUS02000382.1	Protein Homology	CDS	1097	2863	.	-	0	ID=cds-WP_014613731.1;Parent=gene-CYJ00_RS11325;Dbxref=GenBank:WP_014613731.1;Name=WP_014613731.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=CYJ00_RS11325;product=aspartate--tRNA ligase;protein_id=WP_014613731.1;transl_table=11
NZ_PJUS02000382.1	RefSeq	gene	2863	4134	.	-	.	ID=gene-CYJ00_RS11330;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CYJ00_RS11330;old_locus_tag=CYJ00_011335
NZ_PJUS02000382.1	Protein Homology	CDS	2863	4134	.	-	0	ID=cds-WP_014613730.1;Parent=gene-CYJ00_RS11330;Dbxref=GenBank:WP_014613730.1;Name=WP_014613730.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=CYJ00_RS11330;product=histidine--tRNA ligase;protein_id=WP_014613730.1;transl_table=11
NZ_PJUS02000382.1	RefSeq	gene	4496	5371	.	-	.	ID=gene-CYJ00_RS11335;Name=CYJ00_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11335;old_locus_tag=CYJ00_011340
NZ_PJUS02000382.1	Protein Homology	CDS	4496	5371	.	-	0	ID=cds-WP_037542837.1;Parent=gene-CYJ00_RS11335;Dbxref=GenBank:WP_037542837.1;Name=WP_037542837.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=CYJ00_RS11335;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_037542837.1;transl_table=11
NZ_PJUS02000382.1	RefSeq	gene	5368	5820	.	-	.	ID=gene-CYJ00_RS11340;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CYJ00_RS11340;old_locus_tag=CYJ00_011345
NZ_PJUS02000382.1	Protein Homology	CDS	5368	5820	.	-	0	ID=cds-WP_014613728.1;Parent=gene-CYJ00_RS11340;Dbxref=GenBank:WP_014613728.1;Name=WP_014613728.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302954.1;locus_tag=CYJ00_RS11340;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014613728.1;transl_table=11
NZ_PJUS02000382.1	RefSeq	gene	5833	8022	.	-	.	ID=gene-CYJ00_RS11345;Name=CYJ00_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11345;old_locus_tag=CYJ00_011350
NZ_PJUS02000382.1	Protein Homology	CDS	5833	8022	.	-	0	ID=cds-WP_014613727.1;Parent=gene-CYJ00_RS11345;Dbxref=GenBank:WP_014613727.1;Name=WP_014613727.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=CYJ00_RS11345;product=RelA/SpoT family protein;protein_id=WP_014613727.1;transl_table=11
##sequence-region NZ_PJUS02000281.1 1 7310
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000281.1	RefSeq	region	1	7310	.	+	.	ID=NZ_PJUS02000281.1:1..7310;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000281.1	RefSeq	gene	1	1545	.	-	.	ID=gene-CYJ00_RS07515;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07515;old_locus_tag=CYJ00_007520
NZ_PJUS02000281.1	Protein Homology	CDS	1	1545	.	-	0	ID=cds-WP_014614405.1;Parent=gene-CYJ00_RS07515;Dbxref=GenBank:WP_014614405.1;Name=WP_014614405.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=CYJ00_RS07515;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_014614405.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	1955	2344	.	+	.	ID=gene-CYJ00_RS07520;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=CYJ00_RS07520;old_locus_tag=CYJ00_007525
NZ_PJUS02000281.1	Protein Homology	CDS	1955	2344	.	+	0	ID=cds-WP_014614406.1;Parent=gene-CYJ00_RS07520;Dbxref=GenBank:WP_014614406.1;Name=WP_014614406.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=CYJ00_RS07520;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_014614406.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	2776	3021	.	-	.	ID=gene-CYJ00_RS07530;Name=CYJ00_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07530;old_locus_tag=CYJ00_007535
NZ_PJUS02000281.1	Protein Homology	CDS	2776	3021	.	-	0	ID=cds-WP_014614407.1;Parent=gene-CYJ00_RS07530;Dbxref=GenBank:WP_014614407.1;Name=WP_014614407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614407.1;locus_tag=CYJ00_RS07530;product=hypothetical protein;protein_id=WP_014614407.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	3655	3855	.	+	.	ID=gene-CYJ00_RS07535;Name=CYJ00_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07535;old_locus_tag=CYJ00_007540
NZ_PJUS02000281.1	Protein Homology	CDS	3655	3855	.	+	0	ID=cds-WP_014614408.1;Parent=gene-CYJ00_RS07535;Dbxref=GenBank:WP_014614408.1;Name=WP_014614408.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=CYJ00_RS07535;product=cold-shock protein;protein_id=WP_014614408.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	3916	4182	.	-	.	ID=gene-CYJ00_RS07540;Name=CYJ00_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07540;old_locus_tag=CYJ00_007545
NZ_PJUS02000281.1	Protein Homology	CDS	3916	4182	.	-	0	ID=cds-WP_014614409.1;Parent=gene-CYJ00_RS07540;Dbxref=GenBank:WP_014614409.1;Name=WP_014614409.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=CYJ00_RS07540;product=FmdB family zinc ribbon protein;protein_id=WP_014614409.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	4182	5372	.	-	.	ID=gene-CYJ00_RS07545;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07545;old_locus_tag=CYJ00_007550
NZ_PJUS02000281.1	Protein Homology	CDS	4182	5372	.	-	0	ID=cds-WP_100006781.1;Parent=gene-CYJ00_RS07545;Dbxref=GenBank:WP_100006781.1;Name=WP_100006781.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728867.1;locus_tag=CYJ00_RS07545;product=formamidase;protein_id=WP_100006781.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	5556	5816	.	-	.	ID=gene-CYJ00_RS07550;Name=CYJ00_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07550;old_locus_tag=CYJ00_007555
NZ_PJUS02000281.1	Protein Homology	CDS	5556	5816	.	-	0	ID=cds-WP_015728866.1;Parent=gene-CYJ00_RS07550;Dbxref=GenBank:WP_015728866.1;Name=WP_015728866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=CYJ00_RS07550;product=DUF1871 family protein;protein_id=WP_015728866.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	5838	6431	.	-	.	ID=gene-CYJ00_RS07555;Name=CYJ00_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07555;old_locus_tag=CYJ00_007560
NZ_PJUS02000281.1	Protein Homology	CDS	5838	6431	.	-	0	ID=cds-WP_014614412.1;Parent=gene-CYJ00_RS07555;Dbxref=GenBank:WP_014614412.1;Name=WP_014614412.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=CYJ00_RS07555;product=peptidylprolyl isomerase;protein_id=WP_014614412.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	gene	6505	6885	.	+	.	ID=gene-CYJ00_RS07560;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07560;old_locus_tag=CYJ00_007565
NZ_PJUS02000281.1	Protein Homology	CDS	6505	6885	.	+	0	ID=cds-WP_014614413.1;Parent=gene-CYJ00_RS07560;Dbxref=GenBank:WP_014614413.1;Name=WP_014614413.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614413.1;locus_tag=CYJ00_RS07560;product=sporulation phosphorelay system protein KapB;protein_id=WP_014614413.1;transl_table=11
NZ_PJUS02000281.1	RefSeq	pseudogene	7012	7310	.	+	.	ID=gene-CYJ00_RS07565;Name=CYJ00_RS07565;end_range=7310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS07565;old_locus_tag=CYJ00_007570;partial=true;pseudo=true
NZ_PJUS02000281.1	Protein Homology	CDS	7012	7310	.	+	0	ID=cds-CYJ00_RS07565;Parent=gene-CYJ00_RS07565;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=CYJ00_RS07565;partial=true;product=Na+/H+ antiporter subunit A;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000197.1 1 9090
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000197.1	RefSeq	region	1	9090	.	+	.	ID=NZ_PJUS02000197.1:1..9090;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000197.1	RefSeq	gene	11	3466	.	+	.	ID=gene-CYJ00_RS05360;Name=CYJ00_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05360;old_locus_tag=CYJ00_005365
NZ_PJUS02000197.1	Protein Homology	CDS	11	3466	.	+	0	ID=cds-WP_101457840.1;Parent=gene-CYJ00_RS05360;Dbxref=GenBank:WP_101457840.1;Name=WP_101457840.1;Ontology_term=GO:0003924,GO:0005525,GO:0008289;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=CYJ00_RS05360;product=dynamin family protein;protein_id=WP_101457840.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	3471	4352	.	+	.	ID=gene-CYJ00_RS05365;Name=CYJ00_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05365;old_locus_tag=CYJ00_005370
NZ_PJUS02000197.1	Protein Homology	CDS	3471	4352	.	+	0	ID=cds-WP_014613914.1;Parent=gene-CYJ00_RS05365;Dbxref=GenBank:WP_014613914.1;Name=WP_014613914.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729127.1;locus_tag=CYJ00_RS05365;product=5'-3' exonuclease;protein_id=WP_014613914.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	4482	4880	.	-	.	ID=gene-CYJ00_RS05370;Name=CYJ00_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05370;old_locus_tag=CYJ00_005375
NZ_PJUS02000197.1	Protein Homology	CDS	4482	4880	.	-	0	ID=cds-WP_020219606.1;Parent=gene-CYJ00_RS05370;Dbxref=GenBank:WP_020219606.1;Name=WP_020219606.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219606.1;locus_tag=CYJ00_RS05370;product=ribonuclease HI family protein;protein_id=WP_020219606.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	4936	5634	.	-	.	ID=gene-CYJ00_RS05375;Name=CYJ00_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05375;old_locus_tag=CYJ00_005380
NZ_PJUS02000197.1	Protein Homology	CDS	4936	5634	.	-	0	ID=cds-WP_014613916.1;Parent=gene-CYJ00_RS05375;Dbxref=GenBank:WP_014613916.1;Name=WP_014613916.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167630.1;locus_tag=CYJ00_RS05375;product=queuosine precursor transporter;protein_id=WP_014613916.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	5860	6045	.	+	.	ID=gene-CYJ00_RS05380;Name=CYJ00_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05380;old_locus_tag=CYJ00_005385
NZ_PJUS02000197.1	Protein Homology	CDS	5860	6045	.	+	0	ID=cds-WP_014613917.1;Parent=gene-CYJ00_RS05380;Dbxref=GenBank:WP_014613917.1;Name=WP_014613917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=CYJ00_RS05380;product=zinc-finger domain-containing protein;protein_id=WP_014613917.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	6077	7195	.	+	.	ID=gene-CYJ00_RS05385;Name=CYJ00_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05385;old_locus_tag=CYJ00_005390
NZ_PJUS02000197.1	Protein Homology	CDS	6077	7195	.	+	0	ID=cds-WP_101457841.1;Parent=gene-CYJ00_RS05385;Dbxref=GenBank:WP_101457841.1;Name=WP_101457841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165321.1;locus_tag=CYJ00_RS05385;product=conserved virulence factor C family protein;protein_id=WP_101457841.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	7220	7660	.	+	.	ID=gene-CYJ00_RS05390;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05390;old_locus_tag=CYJ00_005395
NZ_PJUS02000197.1	Protein Homology	CDS	7220	7660	.	+	0	ID=cds-WP_070407439.1;Parent=gene-CYJ00_RS05390;Dbxref=GenBank:WP_070407439.1;Name=WP_070407439.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=CYJ00_RS05390;product=bacilliredoxin BrxA;protein_id=WP_070407439.1;transl_table=11
NZ_PJUS02000197.1	RefSeq	gene	8468	9090	.	+	.	ID=gene-CYJ00_RS05395;Name=CYJ00_RS05395;end_range=9090,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05395;old_locus_tag=CYJ00_005400;partial=true
NZ_PJUS02000197.1	Protein Homology	CDS	8468	9090	.	+	0	ID=cds-WP_101457842.1;Parent=gene-CYJ00_RS05395;Dbxref=GenBank:WP_101457842.1;Name=WP_101457842.1;Ontology_term=GO:0006231,GO:0004799;end_range=9090,.;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=CYJ00_RS05395;partial=true;product=thymidylate synthase;protein_id=WP_101457842.1;transl_table=11
##sequence-region NZ_PJUS02000001.1 1 7146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000001.1	RefSeq	region	1	7146	.	+	.	ID=NZ_PJUS02000001.1:1..7146;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000001.1	RefSeq	gene	9	323	.	-	.	ID=gene-CYJ00_RS00005;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00005;old_locus_tag=CYJ00_000005
NZ_PJUS02000001.1	Protein Homology	CDS	9	323	.	-	0	ID=cds-WP_014614204.1;Parent=gene-CYJ00_RS00005;Dbxref=GenBank:WP_014614204.1;Name=WP_014614204.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=CYJ00_RS00005;product=thioredoxin;protein_id=WP_014614204.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	402	2750	.	-	.	ID=gene-CYJ00_RS00010;Name=CYJ00_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00010;old_locus_tag=CYJ00_000010
NZ_PJUS02000001.1	Protein Homology	CDS	402	2750	.	-	0	ID=cds-WP_015728972.1;Parent=gene-CYJ00_RS00010;Dbxref=GenBank:WP_015728972.1;Name=WP_015728972.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=CYJ00_RS00010;product=endonuclease MutS2;protein_id=WP_015728972.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	2766	4475	.	-	.	ID=gene-CYJ00_RS00015;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=CYJ00_RS00015;old_locus_tag=CYJ00_000015
NZ_PJUS02000001.1	Protein Homology	CDS	2766	4475	.	-	0	ID=cds-WP_014614206.1;Parent=gene-CYJ00_RS00015;Dbxref=GenBank:WP_014614206.1;Name=WP_014614206.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614206.1;locus_tag=CYJ00_RS00015;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_014614206.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	4548	5069	.	-	.	ID=gene-CYJ00_RS00020;Name=CYJ00_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00020;old_locus_tag=CYJ00_000020
NZ_PJUS02000001.1	Protein Homology	CDS	4548	5069	.	-	0	ID=cds-WP_037543270.1;Parent=gene-CYJ00_RS00020;Dbxref=GenBank:WP_037543270.1;Name=WP_037543270.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166358.1;locus_tag=CYJ00_RS00020;product=CvpA family protein;protein_id=WP_037543270.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	5071	5337	.	-	.	ID=gene-CYJ00_RS00025;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00025;old_locus_tag=CYJ00_000025
NZ_PJUS02000001.1	Protein Homology	CDS	5071	5337	.	-	0	ID=cds-WP_019166359.1;Parent=gene-CYJ00_RS00025;Dbxref=GenBank:WP_019166359.1;Name=WP_019166359.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614208.1;locus_tag=CYJ00_RS00025;product=cell division protein ZapA;protein_id=WP_019166359.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	5480	6418	.	+	.	ID=gene-CYJ00_RS00030;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00030;old_locus_tag=CYJ00_000030
NZ_PJUS02000001.1	Protein Homology	CDS	5480	6418	.	+	0	ID=cds-WP_014614209.1;Parent=gene-CYJ00_RS00030;Dbxref=GenBank:WP_014614209.1;Name=WP_014614209.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728969.1;locus_tag=CYJ00_RS00030;product=ribonuclease HIII;protein_id=WP_014614209.1;transl_table=11
NZ_PJUS02000001.1	RefSeq	gene	6930	7146	.	+	.	ID=gene-CYJ00_RS13395;Name=CYJ00_RS13395;end_range=7146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13395;old_locus_tag=CYJ00_000035;partial=true
NZ_PJUS02000001.1	Protein Homology	CDS	6930	7146	.	+	0	ID=cds-WP_101457843.1;Parent=gene-CYJ00_RS13395;Dbxref=GenBank:WP_101457843.1;Name=WP_101457843.1;end_range=7146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581821.1;locus_tag=CYJ00_RS13395;partial=true;product=hypothetical protein;protein_id=WP_101457843.1;transl_table=11
##sequence-region NZ_PJUS02000433.1 1 7435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000433.1	RefSeq	region	1	7435	.	+	.	ID=NZ_PJUS02000433.1:1..7435;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000433.1	RefSeq	pseudogene	1	168	.	+	.	ID=gene-CYJ00_RS13870;Name=CYJ00_RS13870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13870;old_locus_tag=CYJ00_012915;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000433.1	Protein Homology	CDS	1	168	.	+	0	ID=cds-CYJ00_RS13870;Parent=gene-CYJ00_RS13870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ00_RS13870;partial=true;product=phage capsid protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	183	1130	.	+	.	ID=gene-CYJ00_RS13785;Name=CYJ00_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13785
NZ_PJUS02000433.1	Protein Homology	CDS	183	1130	.	+	0	ID=cds-WP_241956998.1;Parent=gene-CYJ00_RS13785;Dbxref=GenBank:WP_241956998.1;Name=WP_241956998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044072.1;locus_tag=CYJ00_RS13785;product=sugar-binding protein;protein_id=WP_241956998.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	1150	1473	.	+	.	ID=gene-CYJ00_RS12920;Name=CYJ00_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12920;old_locus_tag=CYJ00_012925
NZ_PJUS02000433.1	Protein Homology	CDS	1150	1473	.	+	0	ID=cds-WP_020219859.1;Parent=gene-CYJ00_RS12920;Dbxref=GenBank:WP_020219859.1;Name=WP_020219859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219859.1;locus_tag=CYJ00_RS12920;product=phage head-tail connector protein;protein_id=WP_020219859.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	1470	1793	.	+	.	ID=gene-CYJ00_RS12925;Name=CYJ00_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12925;old_locus_tag=CYJ00_012930
NZ_PJUS02000433.1	GeneMarkS-2+	CDS	1470	1793	.	+	0	ID=cds-WP_100006820.1;Parent=gene-CYJ00_RS12925;Dbxref=GenBank:WP_100006820.1;Name=WP_100006820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS12925;product=hypothetical protein;protein_id=WP_100006820.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	1771	2121	.	+	.	ID=gene-CYJ00_RS12930;Name=CYJ00_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12930;old_locus_tag=CYJ00_012935
NZ_PJUS02000433.1	Protein Homology	CDS	1771	2121	.	+	0	ID=cds-WP_306419683.1;Parent=gene-CYJ00_RS12930;Dbxref=GenBank:WP_306419683.1;Name=WP_306419683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475992.1;locus_tag=CYJ00_RS12930;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_306419683.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	2130	2516	.	+	.	ID=gene-CYJ00_RS12935;Name=CYJ00_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12935;old_locus_tag=CYJ00_012940
NZ_PJUS02000433.1	GeneMarkS-2+	CDS	2130	2516	.	+	0	ID=cds-WP_100006821.1;Parent=gene-CYJ00_RS12935;Dbxref=GenBank:WP_100006821.1;Name=WP_100006821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS12935;product=hypothetical protein;protein_id=WP_100006821.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	2534	3082	.	+	.	ID=gene-CYJ00_RS12940;Name=CYJ00_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12940;old_locus_tag=CYJ00_012945
NZ_PJUS02000433.1	Protein Homology	CDS	2534	3082	.	+	0	ID=cds-WP_157939021.1;Parent=gene-CYJ00_RS12940;Dbxref=GenBank:WP_157939021.1;Name=WP_157939021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017961.7;locus_tag=CYJ00_RS12940;product=phage tail tube protein;protein_id=WP_157939021.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	3136	3489	.	+	.	ID=gene-CYJ00_RS12945;Name=CYJ00_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12945;old_locus_tag=CYJ00_012950
NZ_PJUS02000433.1	Protein Homology	CDS	3136	3489	.	+	0	ID=cds-WP_100006823.1;Parent=gene-CYJ00_RS12945;Dbxref=GenBank:WP_100006823.1;Name=WP_100006823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219533.1;locus_tag=CYJ00_RS12945;product=tail assembly chaperone;protein_id=WP_100006823.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	3600	3905	.	+	.	ID=gene-CYJ00_RS12950;Name=CYJ00_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12950;old_locus_tag=CYJ00_012955
NZ_PJUS02000433.1	Protein Homology	CDS	3600	3905	.	+	0	ID=cds-WP_233509769.1;Parent=gene-CYJ00_RS12950;Dbxref=GenBank:WP_233509769.1;Name=WP_233509769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808026.1;locus_tag=CYJ00_RS12950;product=hypothetical protein;protein_id=WP_233509769.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	3918	6761	.	+	.	ID=gene-CYJ00_RS12955;Name=CYJ00_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12955;old_locus_tag=CYJ00_012960
NZ_PJUS02000433.1	GeneMarkS-2+	CDS	3918	6761	.	+	0	ID=cds-WP_101457844.1;Parent=gene-CYJ00_RS12955;Dbxref=GenBank:WP_101457844.1;Name=WP_101457844.1;Ontology_term=GO:0098003,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS12955;product=phage tail protein;protein_id=WP_101457844.1;transl_table=11
NZ_PJUS02000433.1	RefSeq	gene	6774	7435	.	+	.	ID=gene-CYJ00_RS12960;Name=CYJ00_RS12960;end_range=7435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12960;old_locus_tag=CYJ00_012965;partial=true
NZ_PJUS02000433.1	Protein Homology	CDS	6774	7435	.	+	0	ID=cds-WP_101457845.1;Parent=gene-CYJ00_RS12960;Dbxref=GenBank:WP_101457845.1;Name=WP_101457845.1;end_range=7435,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017520.7;locus_tag=CYJ00_RS12960;partial=true;product=phage tail domain-containing protein;protein_id=WP_101457845.1;transl_table=11
##sequence-region NZ_PJUS02000066.1 1 6625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000066.1	RefSeq	region	1	6625	.	+	.	ID=NZ_PJUS02000066.1:1..6625;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000066.1	RefSeq	gene	57	1427	.	-	.	ID=gene-CYJ00_RS01750;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01750;old_locus_tag=CYJ00_001750
NZ_PJUS02000066.1	Protein Homology	CDS	57	1427	.	-	0	ID=cds-WP_014614769.1;Parent=gene-CYJ00_RS01750;Dbxref=GenBank:WP_014614769.1;Name=WP_014614769.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166689.1;locus_tag=CYJ00_RS01750;product=DNA repair protein RadA;protein_id=WP_014614769.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	gene	1814	2560	.	-	.	ID=gene-CYJ00_RS01755;Name=CYJ00_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01755;old_locus_tag=CYJ00_001755
NZ_PJUS02000066.1	Protein Homology	CDS	1814	2560	.	-	0	ID=cds-WP_101457846.1;Parent=gene-CYJ00_RS01755;Dbxref=GenBank:WP_101457846.1;Name=WP_101457846.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728605.1;locus_tag=CYJ00_RS01755;product=ABC transporter permease;protein_id=WP_101457846.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	gene	2547	3251	.	-	.	ID=gene-CYJ00_RS01760;Name=CYJ00_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01760;old_locus_tag=CYJ00_001760
NZ_PJUS02000066.1	Protein Homology	CDS	2547	3251	.	-	0	ID=cds-WP_014614771.1;Parent=gene-CYJ00_RS01760;Dbxref=GenBank:WP_014614771.1;Name=WP_014614771.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614771.1;locus_tag=CYJ00_RS01760;product=ABC transporter ATP-binding protein;protein_id=WP_014614771.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	gene	3266	4225	.	-	.	ID=gene-CYJ00_RS01765;Name=CYJ00_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01765;old_locus_tag=CYJ00_001765
NZ_PJUS02000066.1	Protein Homology	CDS	3266	4225	.	-	0	ID=cds-WP_233508785.1;Parent=gene-CYJ00_RS01765;Dbxref=GenBank:WP_233508785.1;Name=WP_233508785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614772.1;locus_tag=CYJ00_RS01765;product=hypothetical protein;protein_id=WP_233508785.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	gene	4225	5037	.	-	.	ID=gene-CYJ00_RS01770;Name=CYJ00_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01770;old_locus_tag=CYJ00_001770
NZ_PJUS02000066.1	Protein Homology	CDS	4225	5037	.	-	0	ID=cds-WP_063284844.1;Parent=gene-CYJ00_RS01770;Dbxref=GenBank:WP_063284844.1;Name=WP_063284844.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614773.1;locus_tag=CYJ00_RS01770;product=SagB family peptide dehydrogenase;protein_id=WP_063284844.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	gene	5057	6277	.	-	.	ID=gene-CYJ00_RS01775;Name=CYJ00_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01775;old_locus_tag=CYJ00_001775
NZ_PJUS02000066.1	Protein Homology	CDS	5057	6277	.	-	0	ID=cds-WP_063284843.1;Parent=gene-CYJ00_RS01775;Dbxref=GenBank:WP_063284843.1;Name=WP_063284843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614774.1;locus_tag=CYJ00_RS01775;product=YcaO-like family protein;protein_id=WP_063284843.1;transl_table=11
NZ_PJUS02000066.1	RefSeq	pseudogene	6274	6625	.	-	.	ID=gene-CYJ00_RS01780;Name=CYJ00_RS01780;end_range=6625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS01780;old_locus_tag=CYJ00_001780;partial=true;pseudo=true
NZ_PJUS02000066.1	Protein Homology	CDS	6274	6625	.	-	1	ID=cds-CYJ00_RS01780;Parent=gene-CYJ00_RS01780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728602.1;locus_tag=CYJ00_RS01780;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000198.1 1 8220
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000198.1	RefSeq	region	1	8220	.	+	.	ID=NZ_PJUS02000198.1:1..8220;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000198.1	RefSeq	gene	31	633	.	-	.	ID=gene-CYJ00_RS05400;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CYJ00_RS05400;old_locus_tag=CYJ00_005405
NZ_PJUS02000198.1	Protein Homology	CDS	31	633	.	-	0	ID=cds-WP_014613654.1;Parent=gene-CYJ00_RS05400;Dbxref=GenBank:WP_014613654.1;Name=WP_014613654.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CYJ00_RS05400;product=30S ribosomal protein S4;protein_id=WP_014613654.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	868	1323	.	-	.	ID=gene-CYJ00_RS05405;Name=CYJ00_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05405;old_locus_tag=CYJ00_005410
NZ_PJUS02000198.1	Protein Homology	CDS	868	1323	.	-	0	ID=cds-WP_063278930.1;Parent=gene-CYJ00_RS05405;Dbxref=GenBank:WP_063278930.1;Name=WP_063278930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613655.1;locus_tag=CYJ00_RS05405;product=GAF domain-containing protein;protein_id=WP_063278930.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	1506	3206	.	+	.	ID=gene-CYJ00_RS05410;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05410;old_locus_tag=CYJ00_005415
NZ_PJUS02000198.1	Protein Homology	CDS	1506	3206	.	+	0	ID=cds-WP_014613656.1;Parent=gene-CYJ00_RS05410;Dbxref=GenBank:WP_014613656.1;Name=WP_014613656.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613656.1;locus_tag=CYJ00_RS05410;product=septation ring formation regulator EzrA;protein_id=WP_014613656.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	3431	4567	.	+	.	ID=gene-CYJ00_RS05415;Name=CYJ00_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05415;old_locus_tag=CYJ00_005420
NZ_PJUS02000198.1	Protein Homology	CDS	3431	4567	.	+	0	ID=cds-WP_065354171.1;Parent=gene-CYJ00_RS05415;Dbxref=GenBank:WP_065354171.1;Name=WP_065354171.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=CYJ00_RS05415;product=cysteine desulfurase family protein;protein_id=WP_065354171.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	4564	5784	.	+	.	ID=gene-CYJ00_RS05420;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CYJ00_RS05420;old_locus_tag=CYJ00_005425
NZ_PJUS02000198.1	Protein Homology	CDS	4564	5784	.	+	0	ID=cds-WP_014613658.1;Parent=gene-CYJ00_RS05420;Dbxref=GenBank:WP_014613658.1;Name=WP_014613658.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165374.1;locus_tag=CYJ00_RS05420;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_014613658.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	5800	6573	.	+	.	ID=gene-CYJ00_RS05425;Name=CYJ00_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05425;old_locus_tag=CYJ00_005430
NZ_PJUS02000198.1	Protein Homology	CDS	5800	6573	.	+	0	ID=cds-WP_037542816.1;Parent=gene-CYJ00_RS05425;Dbxref=GenBank:WP_037542816.1;Name=WP_037542816.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613659.1;locus_tag=CYJ00_RS05425;product=TSUP family transporter;protein_id=WP_037542816.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	6730	7722	.	+	.	ID=gene-CYJ00_RS05430;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05430;old_locus_tag=CYJ00_005435
NZ_PJUS02000198.1	Protein Homology	CDS	6730	7722	.	+	0	ID=cds-WP_100006547.1;Parent=gene-CYJ00_RS05430;Dbxref=GenBank:WP_100006547.1;Name=WP_100006547.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613660.1;locus_tag=CYJ00_RS05430;product=signal peptide peptidase SppA;protein_id=WP_100006547.1;transl_table=11
NZ_PJUS02000198.1	RefSeq	gene	7732	8220	.	+	.	ID=gene-CYJ00_RS05435;Name=CYJ00_RS05435;end_range=8220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05435;old_locus_tag=CYJ00_005440;partial=true
NZ_PJUS02000198.1	Protein Homology	CDS	7732	8220	.	+	0	ID=cds-WP_101457847.1;Parent=gene-CYJ00_RS05435;Dbxref=GenBank:WP_101457847.1;Name=WP_101457847.1;Ontology_term=GO:0005886;end_range=8220,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613661.1;locus_tag=CYJ00_RS05435;partial=true;product=RDD family protein;protein_id=WP_101457847.1;transl_table=11
##sequence-region NZ_PJUS02000282.1 1 7807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000282.1	RefSeq	region	1	7807	.	+	.	ID=NZ_PJUS02000282.1:1..7807;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000282.1	RefSeq	gene	1	648	.	-	.	ID=gene-CYJ00_RS07570;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=CYJ00_RS07570;old_locus_tag=CYJ00_007575;partial=true;start_range=.,1
NZ_PJUS02000282.1	Protein Homology	CDS	1	648	.	-	0	ID=cds-WP_101457848.1;Parent=gene-CYJ00_RS07570;Dbxref=GenBank:WP_101457848.1;Name=WP_101457848.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=CYJ00_RS07570;partial=true;product=ribosome biogenesis GTPase YqeH;protein_id=WP_101457848.1;start_range=.,1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	649	1176	.	-	.	ID=gene-CYJ00_RS07575;Name=CYJ00_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07575;old_locus_tag=CYJ00_007580
NZ_PJUS02000282.1	Protein Homology	CDS	649	1176	.	-	0	ID=cds-WP_014613759.1;Parent=gene-CYJ00_RS07575;Dbxref=GenBank:WP_014613759.1;Name=WP_014613759.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=CYJ00_RS07575;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_014613759.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	1249	1935	.	-	.	ID=gene-CYJ00_RS07580;Name=CYJ00_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07580;old_locus_tag=CYJ00_007585
NZ_PJUS02000282.1	Protein Homology	CDS	1249	1935	.	-	0	ID=cds-WP_014613758.1;Parent=gene-CYJ00_RS07580;Dbxref=GenBank:WP_014613758.1;Name=WP_014613758.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302980.1;locus_tag=CYJ00_RS07580;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_014613758.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	2185	3423	.	-	.	ID=gene-CYJ00_RS07585;Name=CYJ00_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07585;old_locus_tag=CYJ00_007590
NZ_PJUS02000282.1	Protein Homology	CDS	2185	3423	.	-	0	ID=cds-WP_014613757.1;Parent=gene-CYJ00_RS07585;Dbxref=GenBank:WP_014613757.1;Name=WP_014613757.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169721.1;locus_tag=CYJ00_RS07585;product=NRAMP family divalent metal transporter;protein_id=WP_014613757.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	3427	4185	.	-	.	ID=gene-CYJ00_RS07590;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07590;old_locus_tag=CYJ00_007595
NZ_PJUS02000282.1	Protein Homology	CDS	3427	4185	.	-	0	ID=cds-WP_014613756.1;Parent=gene-CYJ00_RS07590;Dbxref=GenBank:WP_014613756.1;Name=WP_014613756.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165174.1;locus_tag=CYJ00_RS07590;product=5-oxoprolinase subunit PxpA;protein_id=WP_014613756.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	4175	5545	.	-	.	ID=gene-CYJ00_RS07595;Name=CYJ00_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07595;old_locus_tag=CYJ00_007600
NZ_PJUS02000282.1	Protein Homology	CDS	4175	5545	.	-	0	ID=cds-WP_014613755.1;Parent=gene-CYJ00_RS07595;Dbxref=GenBank:WP_014613755.1;Name=WP_014613755.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=CYJ00_RS07595;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_014613755.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	5559	6005	.	-	.	ID=gene-CYJ00_RS07600;Name=CYJ00_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07600;old_locus_tag=CYJ00_007605
NZ_PJUS02000282.1	Protein Homology	CDS	5559	6005	.	-	0	ID=cds-WP_037542842.1;Parent=gene-CYJ00_RS07600;Dbxref=GenBank:WP_037542842.1;Name=WP_037542842.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613754.1;locus_tag=CYJ00_RS07600;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542842.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	5996	7021	.	-	.	ID=gene-CYJ00_RS07605;Name=CYJ00_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07605;old_locus_tag=CYJ00_007610
NZ_PJUS02000282.1	Protein Homology	CDS	5996	7021	.	-	0	ID=cds-WP_037542841.1;Parent=gene-CYJ00_RS07605;Dbxref=GenBank:WP_037542841.1;Name=WP_037542841.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=CYJ00_RS07605;product=5-oxoprolinase subunit C family protein;protein_id=WP_037542841.1;transl_table=11
NZ_PJUS02000282.1	RefSeq	gene	7011	7745	.	-	.	ID=gene-CYJ00_RS07610;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07610;old_locus_tag=CYJ00_007615
NZ_PJUS02000282.1	Protein Homology	CDS	7011	7745	.	-	0	ID=cds-WP_100006540.1;Parent=gene-CYJ00_RS07610;Dbxref=GenBank:WP_100006540.1;Name=WP_100006540.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=CYJ00_RS07610;product=5-oxoprolinase subunit PxpB;protein_id=WP_100006540.1;transl_table=11
##sequence-region NZ_PJUS02000379.1 1 6959
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000379.1	RefSeq	region	1	6959	.	+	.	ID=NZ_PJUS02000379.1:1..6959;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000379.1	RefSeq	gene	50	2047	.	+	.	ID=gene-CYJ00_RS11285;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CYJ00_RS11285;old_locus_tag=CYJ00_011290
NZ_PJUS02000379.1	Protein Homology	CDS	50	2047	.	+	0	ID=cds-WP_015729091.1;Parent=gene-CYJ00_RS11285;Dbxref=GenBank:WP_015729091.1;Name=WP_015729091.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=CYJ00_RS11285;product=DNA topoisomerase IV subunit B;protein_id=WP_015729091.1;transl_table=11
NZ_PJUS02000379.1	RefSeq	gene	2047	4458	.	+	.	ID=gene-CYJ00_RS11290;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CYJ00_RS11290;old_locus_tag=CYJ00_011295
NZ_PJUS02000379.1	Protein Homology	CDS	2047	4458	.	+	0	ID=cds-WP_063279036.1;Parent=gene-CYJ00_RS11290;Dbxref=GenBank:WP_063279036.1;Name=WP_063279036.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=CYJ00_RS11290;product=DNA topoisomerase IV subunit A;protein_id=WP_063279036.1;transl_table=11
NZ_PJUS02000379.1	RefSeq	gene	4561	6024	.	+	.	ID=gene-CYJ00_RS11295;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=CYJ00_RS11295;old_locus_tag=CYJ00_011300
NZ_PJUS02000379.1	Protein Homology	CDS	4561	6024	.	+	0	ID=cds-WP_014613973.1;Parent=gene-CYJ00_RS11295;Dbxref=GenBank:WP_014613973.1;Name=WP_014613973.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166553.1;locus_tag=CYJ00_RS11295;product=glutamine transporter AlsT;protein_id=WP_014613973.1;transl_table=11
NZ_PJUS02000379.1	RefSeq	gene	6220	6959	.	+	.	ID=gene-CYJ00_RS11300;Name=CYJ00_RS11300;end_range=6959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11300;old_locus_tag=CYJ00_011305;partial=true
NZ_PJUS02000379.1	Protein Homology	CDS	6220	6959	.	+	0	ID=cds-WP_101457849.1;Parent=gene-CYJ00_RS11300;Dbxref=GenBank:WP_101457849.1;Name=WP_101457849.1;Ontology_term=GO:0006355;end_range=6959,.;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=CYJ00_RS11300;partial=true;product=PRD domain-containing protein;protein_id=WP_101457849.1;transl_table=11
##sequence-region NZ_PJUS02000364.1 1 15639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000364.1	RefSeq	region	1	15639	.	+	.	ID=NZ_PJUS02000364.1:1..15639;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000364.1	RefSeq	gene	1	691	.	+	.	ID=gene-CYJ00_RS10975;Name=CYJ00_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10975;old_locus_tag=CYJ00_010980;partial=true;start_range=.,1
NZ_PJUS02000364.1	Protein Homology	CDS	1	691	.	+	1	ID=cds-WP_198597697.1;Parent=gene-CYJ00_RS10975;Dbxref=GenBank:WP_198597697.1;Name=WP_198597697.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612824.1;locus_tag=CYJ00_RS10975;partial=true;product=glycosyltransferase;protein_id=WP_198597697.1;start_range=.,1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	684	2015	.	+	.	ID=gene-CYJ00_RS10980;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10980;old_locus_tag=CYJ00_010985
NZ_PJUS02000364.1	Protein Homology	CDS	684	2015	.	+	0	ID=cds-WP_014612825.1;Parent=gene-CYJ00_RS10980;Dbxref=GenBank:WP_014612825.1;Name=WP_014612825.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=CYJ00_RS10980;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_014612825.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	2077	3258	.	-	.	ID=gene-CYJ00_RS10985;Name=CYJ00_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10985;old_locus_tag=CYJ00_010990
NZ_PJUS02000364.1	Protein Homology	CDS	2077	3258	.	-	0	ID=cds-WP_096536583.1;Parent=gene-CYJ00_RS10985;Dbxref=GenBank:WP_096536583.1;Name=WP_096536583.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612826.1;locus_tag=CYJ00_RS10985;product=thiolase family protein;protein_id=WP_096536583.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	3282	5543	.	-	.	ID=gene-CYJ00_RS10990;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10990;old_locus_tag=CYJ00_010995
NZ_PJUS02000364.1	Protein Homology	CDS	3282	5543	.	-	0	ID=cds-WP_096536581.1;Parent=gene-CYJ00_RS10990;Dbxref=GenBank:WP_096536581.1;Name=WP_096536581.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612827.1;locus_tag=CYJ00_RS10990;product=3-hydroxyacyl-CoA dehydrogenase/crotonase FadB;protein_id=WP_096536581.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	pseudogene	5589	6804	.	-	.	ID=gene-CYJ00_RS10995;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=pseudogene;locus_tag=CYJ00_RS10995;old_locus_tag=CYJ00_011000;pseudo=true
NZ_PJUS02000364.1	Protein Homology	CDS	5589	6804	.	-	0	ID=cds-CYJ00_RS10995;Parent=gene-CYJ00_RS10995;Note=frameshifted;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167102.1;locus_tag=CYJ00_RS10995;product=acyl-CoA dehydrogenase FadE;pseudo=true;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	6841	8355	.	-	.	ID=gene-CYJ00_RS11000;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CYJ00_RS11000;old_locus_tag=CYJ00_011005
NZ_PJUS02000364.1	Protein Homology	CDS	6841	8355	.	-	0	ID=cds-WP_014612829.1;Parent=gene-CYJ00_RS11000;Dbxref=GenBank:WP_014612829.1;Name=WP_014612829.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612829.1;locus_tag=CYJ00_RS11000;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_014612829.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	8374	9945	.	-	.	ID=gene-CYJ00_RS11005;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=CYJ00_RS11005;old_locus_tag=CYJ00_011010
NZ_PJUS02000364.1	Protein Homology	CDS	8374	9945	.	-	0	ID=cds-WP_014612830.1;Parent=gene-CYJ00_RS11005;Dbxref=GenBank:WP_014612830.1;Name=WP_014612830.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729734.1;locus_tag=CYJ00_RS11005;product=fatty acid degradation protein FadX;protein_id=WP_014612830.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	10233	11405	.	-	.	ID=gene-CYJ00_RS11010;Name=CYJ00_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11010;old_locus_tag=CYJ00_011015
NZ_PJUS02000364.1	Protein Homology	CDS	10233	11405	.	-	0	ID=cds-WP_014612831.1;Parent=gene-CYJ00_RS11010;Dbxref=GenBank:WP_014612831.1;Name=WP_014612831.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729733.1;locus_tag=CYJ00_RS11010;product=MFS transporter;protein_id=WP_014612831.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	11750	12793	.	-	.	ID=gene-CYJ00_RS11015;Name=CYJ00_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11015;old_locus_tag=CYJ00_011020
NZ_PJUS02000364.1	Protein Homology	CDS	11750	12793	.	-	0	ID=cds-WP_063279032.1;Parent=gene-CYJ00_RS11015;Dbxref=GenBank:WP_063279032.1;Name=WP_063279032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612832.1;locus_tag=CYJ00_RS11015;product=acyl-CoA dehydrogenase family protein;protein_id=WP_063279032.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	12813	13577	.	-	.	ID=gene-CYJ00_RS11020;Name=CYJ00_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11020;old_locus_tag=CYJ00_011025
NZ_PJUS02000364.1	Protein Homology	CDS	12813	13577	.	-	0	ID=cds-WP_101457666.1;Parent=gene-CYJ00_RS11020;Dbxref=GenBank:WP_101457666.1;Name=WP_101457666.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729730.1;locus_tag=CYJ00_RS11020;product=ABC transporter permease;protein_id=WP_101457666.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	13583	14530	.	-	.	ID=gene-CYJ00_RS11025;Name=CYJ00_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11025;old_locus_tag=CYJ00_011030
NZ_PJUS02000364.1	Protein Homology	CDS	13583	14530	.	-	0	ID=cds-WP_096536575.1;Parent=gene-CYJ00_RS11025;Dbxref=GenBank:WP_096536575.1;Name=WP_096536575.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612834.1;locus_tag=CYJ00_RS11025;product=ABC transporter substrate-binding protein;protein_id=WP_096536575.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	14544	15284	.	-	.	ID=gene-CYJ00_RS11030;Name=CYJ00_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11030;old_locus_tag=CYJ00_011035
NZ_PJUS02000364.1	Protein Homology	CDS	14544	15284	.	-	0	ID=cds-WP_063279033.1;Parent=gene-CYJ00_RS11030;Dbxref=GenBank:WP_063279033.1;Name=WP_063279033.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590849.1;locus_tag=CYJ00_RS11030;product=ABC transporter ATP-binding protein;protein_id=WP_063279033.1;transl_table=11
NZ_PJUS02000364.1	RefSeq	gene	15455	15639	.	-	.	ID=gene-CYJ00_RS11035;Name=CYJ00_RS11035;end_range=15639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11035;old_locus_tag=CYJ00_011040;partial=true
NZ_PJUS02000364.1	Protein Homology	CDS	15455	15639	.	-	2	ID=cds-WP_133158354.1;Parent=gene-CYJ00_RS11035;Dbxref=GenBank:WP_133158354.1;Name=WP_133158354.1;end_range=15639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498735.1;locus_tag=CYJ00_RS11035;partial=true;product=DUF4242 domain-containing protein;protein_id=WP_133158354.1;transl_table=11
##sequence-region NZ_PJUS02000114.1 1 8348
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000114.1	RefSeq	region	1	8348	.	+	.	ID=NZ_PJUS02000114.1:1..8348;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000114.1	RefSeq	gene	62	523	.	+	.	ID=gene-CYJ00_RS03285;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03285;old_locus_tag=CYJ00_003290
NZ_PJUS02000114.1	Protein Homology	CDS	62	523	.	+	0	ID=cds-WP_037542948.1;Parent=gene-CYJ00_RS03285;Dbxref=GenBank:WP_037542948.1;Name=WP_037542948.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165243.1;locus_tag=CYJ00_RS03285;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542948.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	525	1880	.	+	.	ID=gene-CYJ00_RS03290;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03290;old_locus_tag=CYJ00_003295
NZ_PJUS02000114.1	Protein Homology	CDS	525	1880	.	+	0	ID=cds-WP_063284394.1;Parent=gene-CYJ00_RS03290;Dbxref=GenBank:WP_063284394.1;Name=WP_063284394.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613837.1;locus_tag=CYJ00_RS03290;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_063284394.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	1901	2275	.	+	.	ID=gene-CYJ00_RS03295;Name=CYJ00_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03295;old_locus_tag=CYJ00_003300
NZ_PJUS02000114.1	Protein Homology	CDS	1901	2275	.	+	0	ID=cds-WP_014613838.1;Parent=gene-CYJ00_RS03295;Dbxref=GenBank:WP_014613838.1;Name=WP_014613838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=CYJ00_RS03295;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613838.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	2296	2688	.	+	.	ID=gene-CYJ00_RS03300;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03300;old_locus_tag=CYJ00_003305
NZ_PJUS02000114.1	Protein Homology	CDS	2296	2688	.	+	0	ID=cds-WP_014613839.1;Parent=gene-CYJ00_RS03300;Dbxref=GenBank:WP_014613839.1;Name=WP_014613839.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=CYJ00_RS03300;product=transcription antitermination factor NusB;protein_id=WP_014613839.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	2697	4043	.	+	.	ID=gene-CYJ00_RS03305;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03305;old_locus_tag=CYJ00_003310
NZ_PJUS02000114.1	Protein Homology	CDS	2697	4043	.	+	0	ID=cds-WP_014613840.1;Parent=gene-CYJ00_RS03305;Dbxref=GenBank:WP_014613840.1;Name=WP_014613840.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=CYJ00_RS03305;product=exodeoxyribonuclease VII large subunit;protein_id=WP_014613840.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	4027	4251	.	+	.	ID=gene-CYJ00_RS03310;Name=CYJ00_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03310;old_locus_tag=CYJ00_003315
NZ_PJUS02000114.1	Protein Homology	CDS	4027	4251	.	+	0	ID=cds-WP_014613841.1;Parent=gene-CYJ00_RS03310;Dbxref=GenBank:WP_014613841.1;Name=WP_014613841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=CYJ00_RS03310;product=exodeoxyribonuclease VII small subunit;protein_id=WP_014613841.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	4232	5113	.	+	.	ID=gene-CYJ00_RS03315;Name=CYJ00_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03315;old_locus_tag=CYJ00_003320
NZ_PJUS02000114.1	Protein Homology	CDS	4232	5113	.	+	0	ID=cds-WP_041613228.1;Parent=gene-CYJ00_RS03315;Dbxref=GenBank:WP_041613228.1;Name=WP_041613228.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729158.1;locus_tag=CYJ00_RS03315;product=polyprenyl synthetase family protein;protein_id=WP_041613228.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	5183	7051	.	+	.	ID=gene-CYJ00_RS03320;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CYJ00_RS03320;old_locus_tag=CYJ00_003325
NZ_PJUS02000114.1	Protein Homology	CDS	5183	7051	.	+	0	ID=cds-WP_037542957.1;Parent=gene-CYJ00_RS03320;Dbxref=GenBank:WP_037542957.1;Name=WP_037542957.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219621.1;locus_tag=CYJ00_RS03320;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_037542957.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	7336	7788	.	+	.	ID=gene-CYJ00_RS03325;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=CYJ00_RS03325;old_locus_tag=CYJ00_003330
NZ_PJUS02000114.1	Protein Homology	CDS	7336	7788	.	+	0	ID=cds-WP_014613844.1;Parent=gene-CYJ00_RS03325;Dbxref=GenBank:WP_014613844.1;Name=WP_014613844.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=CYJ00_RS03325;product=transcriptional regulator AhrC/ArgR;protein_id=WP_014613844.1;transl_table=11
NZ_PJUS02000114.1	RefSeq	gene	7802	8348	.	+	.	ID=gene-CYJ00_RS03330;Name=CYJ00_RS03330;end_range=8348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03330;old_locus_tag=CYJ00_003335;partial=true
NZ_PJUS02000114.1	Protein Homology	CDS	7802	8348	.	+	0	ID=cds-WP_157938998.1;Parent=gene-CYJ00_RS03330;Dbxref=GenBank:WP_157938998.1;Name=WP_157938998.1;Ontology_term=GO:0006302,GO:0016887;end_range=8348,.;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500130.1;locus_tag=CYJ00_RS03330;partial=true;product=AAA family ATPase;protein_id=WP_157938998.1;transl_table=11
##sequence-region NZ_PJUS02000212.1 1 6255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000212.1	RefSeq	region	1	6255	.	+	.	ID=NZ_PJUS02000212.1:1..6255;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000212.1	RefSeq	gene	159	1436	.	-	.	ID=gene-CYJ00_RS05875;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=CYJ00_RS05875;old_locus_tag=CYJ00_005880
NZ_PJUS02000212.1	Protein Homology	CDS	159	1436	.	-	0	ID=cds-WP_063284890.1;Parent=gene-CYJ00_RS05875;Dbxref=GenBank:WP_063284890.1;Name=WP_063284890.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166222.1;locus_tag=CYJ00_RS05875;product=penicillin-binding protein PBP4;protein_id=WP_063284890.1;transl_table=11
NZ_PJUS02000212.1	RefSeq	gene	1711	3465	.	+	.	ID=gene-CYJ00_RS05880;Name=CYJ00_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05880;old_locus_tag=CYJ00_005885
NZ_PJUS02000212.1	Protein Homology	CDS	1711	3465	.	+	0	ID=cds-WP_096636575.1;Parent=gene-CYJ00_RS05880;Dbxref=GenBank:WP_096636575.1;Name=WP_096636575.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=CYJ00_RS05880;product=ABC transporter ATP-binding protein;protein_id=WP_096636575.1;transl_table=11
NZ_PJUS02000212.1	RefSeq	gene	3623	3781	.	-	.	ID=gene-CYJ00_RS05885;Name=CYJ00_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05885;old_locus_tag=CYJ00_005890
NZ_PJUS02000212.1	Protein Homology	CDS	3623	3781	.	-	0	ID=cds-WP_096636576.1;Parent=gene-CYJ00_RS05885;Dbxref=GenBank:WP_096636576.1;Name=WP_096636576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166220.1;locus_tag=CYJ00_RS05885;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_096636576.1;transl_table=11
NZ_PJUS02000212.1	RefSeq	gene	3794	5788	.	-	.	ID=gene-CYJ00_RS05890;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05890;old_locus_tag=CYJ00_005895
NZ_PJUS02000212.1	Protein Homology	CDS	3794	5788	.	-	0	ID=cds-WP_096636577.1;Parent=gene-CYJ00_RS05890;Dbxref=GenBank:WP_096636577.1;Name=WP_096636577.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728703.1;locus_tag=CYJ00_RS05890;product=ferrous iron transport protein B;protein_id=WP_096636577.1;transl_table=11
NZ_PJUS02000212.1	RefSeq	gene	5781	6017	.	-	.	ID=gene-CYJ00_RS05895;Name=CYJ00_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05895;old_locus_tag=CYJ00_005900
NZ_PJUS02000212.1	Protein Homology	CDS	5781	6017	.	-	0	ID=cds-WP_014614614.1;Parent=gene-CYJ00_RS05895;Dbxref=GenBank:WP_014614614.1;Name=WP_014614614.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=CYJ00_RS05895;product=FeoA family protein;protein_id=WP_014614614.1;transl_table=11
##sequence-region NZ_PJUS02000294.1 1 8362
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000294.1	RefSeq	region	1	8362	.	+	.	ID=NZ_PJUS02000294.1:1..8362;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000294.1	RefSeq	gene	13	507	.	+	.	ID=gene-CYJ00_RS07790;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CYJ00_RS07790;old_locus_tag=CYJ00_007795
NZ_PJUS02000294.1	Protein Homology	CDS	13	507	.	+	0	ID=cds-WP_014613662.1;Parent=gene-CYJ00_RS07790;Dbxref=GenBank:WP_014613662.1;Name=WP_014613662.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446674.1;locus_tag=CYJ00_RS07790;product=thiol peroxidase;protein_id=WP_014613662.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	715	1662	.	+	.	ID=gene-CYJ00_RS07795;Name=CYJ00_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07795;old_locus_tag=CYJ00_007800
NZ_PJUS02000294.1	Protein Homology	CDS	715	1662	.	+	0	ID=cds-WP_101457850.1;Parent=gene-CYJ00_RS07795;Dbxref=GenBank:WP_101457850.1;Name=WP_101457850.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722135.1;locus_tag=CYJ00_RS07795;product=class I SAM-dependent methyltransferase;protein_id=WP_101457850.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	1741	2943	.	+	.	ID=gene-CYJ00_RS07800;Name=CYJ00_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07800;old_locus_tag=CYJ00_007805
NZ_PJUS02000294.1	Protein Homology	CDS	1741	2943	.	+	0	ID=cds-WP_015729302.1;Parent=gene-CYJ00_RS07800;Dbxref=GenBank:WP_015729302.1;Name=WP_015729302.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729302.1;locus_tag=CYJ00_RS07800;product=acetate kinase;protein_id=WP_015729302.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	3203	3706	.	-	.	ID=gene-CYJ00_RS07805;Name=CYJ00_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07805;old_locus_tag=CYJ00_007810
NZ_PJUS02000294.1	Protein Homology	CDS	3203	3706	.	-	0	ID=cds-WP_014613665.1;Parent=gene-CYJ00_RS07805;Dbxref=GenBank:WP_014613665.1;Name=WP_014613665.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=CYJ00_RS07805;product=universal stress protein;protein_id=WP_014613665.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	3854	4975	.	+	.	ID=gene-CYJ00_RS07810;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CYJ00_RS07810;old_locus_tag=CYJ00_007815
NZ_PJUS02000294.1	Protein Homology	CDS	3854	4975	.	+	0	ID=cds-WP_101457851.1;Parent=gene-CYJ00_RS07810;Dbxref=GenBank:WP_101457851.1;Name=WP_101457851.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613666.1;locus_tag=CYJ00_RS07810;product=alanine dehydrogenase;protein_id=WP_101457851.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	5068	5703	.	-	.	ID=gene-CYJ00_RS07815;Name=CYJ00_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07815;old_locus_tag=CYJ00_007820
NZ_PJUS02000294.1	Protein Homology	CDS	5068	5703	.	-	0	ID=cds-WP_015729300.1;Parent=gene-CYJ00_RS07815;Dbxref=GenBank:WP_015729300.1;Name=WP_015729300.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220142.1;locus_tag=CYJ00_RS07815;product=copper homeostasis protein CutC;protein_id=WP_015729300.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	5700	6755	.	-	.	ID=gene-CYJ00_RS07820;Name=CYJ00_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07820;old_locus_tag=CYJ00_007825
NZ_PJUS02000294.1	Protein Homology	CDS	5700	6755	.	-	0	ID=cds-WP_014613668.1;Parent=gene-CYJ00_RS07820;Dbxref=GenBank:WP_014613668.1;Name=WP_014613668.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=CYJ00_RS07820;product=M24 family metallopeptidase;protein_id=WP_014613668.1;transl_table=11
NZ_PJUS02000294.1	RefSeq	gene	7012	7701	.	+	.	ID=gene-CYJ00_RS07825;Name=CYJ00_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07825;old_locus_tag=CYJ00_007830
NZ_PJUS02000294.1	Protein Homology	CDS	7012	7701	.	+	0	ID=cds-WP_101457852.1;Parent=gene-CYJ00_RS07825;Dbxref=GenBank:WP_101457852.1;Name=WP_101457852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613669.1;locus_tag=CYJ00_RS07825;product=metal-dependent hydrolase;protein_id=WP_101457852.1;transl_table=11
##sequence-region NZ_PJUS02000339.1 1 5781
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000339.1	RefSeq	region	1	5781	.	+	.	ID=NZ_PJUS02000339.1:1..5781;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000339.1	RefSeq	pseudogene	458	601	.	+	.	ID=gene-CYJ00_RS13755;Name=CYJ00_RS13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13755;old_locus_tag=CYJ00_010380;partial=true;pseudo=true;start_range=.,458
NZ_PJUS02000339.1	Protein Homology	CDS	458	601	.	+	0	ID=cds-CYJ00_RS13755;Parent=gene-CYJ00_RS13755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ00_RS13755;partial=true;product=site-specific integrase;pseudo=true;start_range=.,458;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	991	1305	.	+	.	ID=gene-CYJ00_RS10375;Name=CYJ00_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10375;old_locus_tag=CYJ00_010385
NZ_PJUS02000339.1	Protein Homology	CDS	991	1305	.	+	0	ID=cds-WP_000421280.1;Parent=gene-CYJ00_RS10375;Dbxref=GenBank:WP_000421280.1;Name=WP_000421280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018705633.1;locus_tag=CYJ00_RS10375;product=YdcP family protein;protein_id=WP_000421280.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	1326	1703	.	+	.	ID=gene-CYJ00_RS10380;Name=CYJ00_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10380;old_locus_tag=CYJ00_010390
NZ_PJUS02000339.1	Protein Homology	CDS	1326	1703	.	+	0	ID=cds-WP_001234189.1;Parent=gene-CYJ00_RS10380;Dbxref=GenBank:WP_001234189.1;Name=WP_001234189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009925013.1;locus_tag=CYJ00_RS10380;product=YdcP family protein;protein_id=WP_001234189.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	1713	2486	.	+	.	ID=gene-CYJ00_RS10385;Name=CYJ00_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10385;old_locus_tag=CYJ00_010395
NZ_PJUS02000339.1	Protein Homology	CDS	1713	2486	.	+	0	ID=cds-WP_000185760.1;Parent=gene-CYJ00_RS10385;Dbxref=GenBank:WP_000185760.1;Name=WP_000185760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388713.1;locus_tag=CYJ00_RS10385;product=Mom family adenine methylcarbamoylation protein;protein_id=WP_000185760.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	2508	3911	.	+	.	ID=gene-CYJ00_RS10390;Name=CYJ00_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10390;old_locus_tag=CYJ00_010400
NZ_PJUS02000339.1	Protein Homology	CDS	2508	3911	.	+	0	ID=cds-WP_001130247.1;Parent=gene-CYJ00_RS10390;Dbxref=GenBank:WP_001130247.1;Name=WP_001130247.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130245.1;locus_tag=CYJ00_RS10390;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_001130247.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	4093	5277	.	+	.	ID=gene-CYJ00_RS10395;Name=mobT;gbkey=Gene;gene=mobT;gene_biotype=protein_coding;locus_tag=CYJ00_RS10395;old_locus_tag=CYJ00_010405
NZ_PJUS02000339.1	Protein Homology	CDS	4093	5277	.	+	0	ID=cds-WP_000426691.1;Parent=gene-CYJ00_RS10395;Dbxref=GenBank:WP_000426691.1;Name=WP_000426691.1;Ontology_term=GO:0006270,GO:0003677;gbkey=CDS;gene=mobT;go_function=DNA binding|0003677||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426690.1;locus_tag=CYJ00_RS10395;product=MobT family relaxase;protein_id=WP_000426691.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	5274	5546	.	+	.	ID=gene-CYJ00_RS10400;Name=CYJ00_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10400;old_locus_tag=CYJ00_010410
NZ_PJUS02000339.1	GeneMarkS-2+	CDS	5274	5546	.	+	0	ID=cds-WP_000055367.1;Parent=gene-CYJ00_RS10400;Dbxref=GenBank:WP_000055367.1;Name=WP_000055367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10400;product=hypothetical protein;protein_id=WP_000055367.1;transl_table=11
NZ_PJUS02000339.1	RefSeq	gene	5543	5764	.	+	.	ID=gene-CYJ00_RS10405;Name=CYJ00_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10405;old_locus_tag=CYJ00_010415
NZ_PJUS02000339.1	Protein Homology	CDS	5543	5764	.	+	0	ID=cds-WP_001009054.1;Parent=gene-CYJ00_RS10405;Dbxref=GenBank:WP_001009054.1;Name=WP_001009054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002405428.1;locus_tag=CYJ00_RS10405;product=hypothetical protein;protein_id=WP_001009054.1;transl_table=11
##sequence-region NZ_PJUS02000029.1 1 5719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000029.1	RefSeq	region	1	5719	.	+	.	ID=NZ_PJUS02000029.1:1..5719;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000029.1	RefSeq	pseudogene	29	1019	.	+	.	ID=gene-CYJ00_RS00830;Name=CYJ00_RS00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS00830;old_locus_tag=CYJ00_000830;pseudo=true
NZ_PJUS02000029.1	Protein Homology	CDS	29	1019	.	+	0	ID=cds-CYJ00_RS00830;Parent=gene-CYJ00_RS00830;Note=frameshifted;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166322.1;locus_tag=CYJ00_RS00830;product=tripartite tricarboxylate transporter substrate binding protein;pseudo=true;transl_table=11
NZ_PJUS02000029.1	RefSeq	gene	1038	1481	.	+	.	ID=gene-CYJ00_RS00835;Name=CYJ00_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00835;old_locus_tag=CYJ00_000835
NZ_PJUS02000029.1	Protein Homology	CDS	1038	1481	.	+	0	ID=cds-WP_014612937.1;Parent=gene-CYJ00_RS00835;Dbxref=GenBank:WP_014612937.1;Name=WP_014612937.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612937.1;locus_tag=CYJ00_RS00835;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_014612937.1;transl_table=11
NZ_PJUS02000029.1	RefSeq	gene	1494	2993	.	+	.	ID=gene-CYJ00_RS00840;Name=CYJ00_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00840;old_locus_tag=CYJ00_000840
NZ_PJUS02000029.1	Protein Homology	CDS	1494	2993	.	+	0	ID=cds-WP_065354003.1;Parent=gene-CYJ00_RS00840;Dbxref=GenBank:WP_065354003.1;Name=WP_065354003.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219451.1;locus_tag=CYJ00_RS00840;product=tripartite tricarboxylate transporter permease;protein_id=WP_065354003.1;transl_table=11
NZ_PJUS02000029.1	RefSeq	gene	3050	5572	.	-	.	ID=gene-CYJ00_RS00845;Name=CYJ00_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00845;old_locus_tag=CYJ00_000845
NZ_PJUS02000029.1	Protein Homology	CDS	3050	5572	.	-	0	ID=cds-WP_082239513.1;Parent=gene-CYJ00_RS00845;Dbxref=GenBank:WP_082239513.1;Name=WP_082239513.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612935.1;locus_tag=CYJ00_RS00845;product=glycosyltransferase;protein_id=WP_082239513.1;transl_table=11
##sequence-region NZ_PJUS02000173.1 1 5767
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000173.1	RefSeq	region	1	5767	.	+	.	ID=NZ_PJUS02000173.1:1..5767;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000173.1	RefSeq	gene	1	1658	.	-	.	ID=gene-CYJ00_RS04825;Name=CYJ00_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04825;old_locus_tag=CYJ00_004830;partial=true;start_range=.,1
NZ_PJUS02000173.1	Protein Homology	CDS	1	1658	.	-	0	ID=cds-WP_101457854.1;Parent=gene-CYJ00_RS04825;Dbxref=GenBank:WP_101457854.1;Name=WP_101457854.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=CYJ00_RS04825;partial=true;product=peptide ABC transporter substrate-binding protein;protein_id=WP_101457854.1;start_range=.,1;transl_table=11
NZ_PJUS02000173.1	RefSeq	gene	1681	2622	.	-	.	ID=gene-CYJ00_RS04830;Name=CYJ00_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04830;old_locus_tag=CYJ00_004835
NZ_PJUS02000173.1	Protein Homology	CDS	1681	2622	.	-	0	ID=cds-WP_037543504.1;Parent=gene-CYJ00_RS04830;Dbxref=GenBank:WP_037543504.1;Name=WP_037543504.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614377.1;locus_tag=CYJ00_RS04830;product=ABC transporter ATP-binding protein;protein_id=WP_037543504.1;transl_table=11
NZ_PJUS02000173.1	RefSeq	gene	2615	3694	.	-	.	ID=gene-CYJ00_RS04835;Name=CYJ00_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04835;old_locus_tag=CYJ00_004840
NZ_PJUS02000173.1	Protein Homology	CDS	2615	3694	.	-	0	ID=cds-WP_014614378.1;Parent=gene-CYJ00_RS04835;Dbxref=GenBank:WP_014614378.1;Name=WP_014614378.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614378.1;locus_tag=CYJ00_RS04835;product=ABC transporter ATP-binding protein;protein_id=WP_014614378.1;transl_table=11
NZ_PJUS02000173.1	RefSeq	gene	3709	4770	.	-	.	ID=gene-CYJ00_RS04840;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=CYJ00_RS04840;old_locus_tag=CYJ00_004845
NZ_PJUS02000173.1	Protein Homology	CDS	3709	4770	.	-	0	ID=cds-WP_020220060.1;Parent=gene-CYJ00_RS04840;Dbxref=GenBank:WP_020220060.1;Name=WP_020220060.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=CYJ00_RS04840;product=oligopeptide ABC transporter permease;protein_id=WP_020220060.1;transl_table=11
NZ_PJUS02000173.1	RefSeq	gene	4770	5696	.	-	.	ID=gene-CYJ00_RS04845;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=CYJ00_RS04845;old_locus_tag=CYJ00_004850
NZ_PJUS02000173.1	Protein Homology	CDS	4770	5696	.	-	0	ID=cds-WP_014614380.1;Parent=gene-CYJ00_RS04845;Dbxref=GenBank:WP_014614380.1;Name=WP_014614380.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CYJ00_RS04845;product=oligopeptide ABC transporter permease;protein_id=WP_014614380.1;transl_table=11
##sequence-region NZ_PJUS02000069.1 1 7617
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000069.1	RefSeq	region	1	7617	.	+	.	ID=NZ_PJUS02000069.1:1..7617;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000069.1	RefSeq	gene	1	681	.	-	.	ID=gene-CYJ00_RS01840;Name=CYJ00_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01840;old_locus_tag=CYJ00_001840;partial=true;start_range=.,1
NZ_PJUS02000069.1	Protein Homology	CDS	1	681	.	-	0	ID=cds-WP_101457855.1;Parent=gene-CYJ00_RS01840;Dbxref=GenBank:WP_101457855.1;Name=WP_101457855.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612786.1;locus_tag=CYJ00_RS01840;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_101457855.1;start_range=.,1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	1254	1778	.	-	.	ID=gene-CYJ00_RS01845;Name=CYJ00_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01845;old_locus_tag=CYJ00_001845
NZ_PJUS02000069.1	Protein Homology	CDS	1254	1778	.	-	0	ID=cds-WP_020219979.1;Parent=gene-CYJ00_RS01845;Dbxref=GenBank:WP_020219979.1;Name=WP_020219979.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612788.1;locus_tag=CYJ00_RS01845;product=DoxX family protein;protein_id=WP_020219979.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	2162	2788	.	-	.	ID=gene-CYJ00_RS01850;Name=CYJ00_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01850;old_locus_tag=CYJ00_001850
NZ_PJUS02000069.1	Protein Homology	CDS	2162	2788	.	-	0	ID=cds-WP_014612789.1;Parent=gene-CYJ00_RS01850;Dbxref=GenBank:WP_014612789.1;Name=WP_014612789.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=CYJ00_RS01850;product=FMN-dependent NADH-azoreductase;protein_id=WP_014612789.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	3049	3741	.	+	.	ID=gene-CYJ00_RS01855;Name=CYJ00_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01855;old_locus_tag=CYJ00_001855
NZ_PJUS02000069.1	Protein Homology	CDS	3049	3741	.	+	0	ID=cds-WP_101457856.1;Parent=gene-CYJ00_RS01855;Dbxref=GenBank:WP_101457856.1;Name=WP_101457856.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612790.1;locus_tag=CYJ00_RS01855;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_101457856.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	4003	4419	.	+	.	ID=gene-CYJ00_RS01860;Name=CYJ00_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01860;old_locus_tag=CYJ00_001860
NZ_PJUS02000069.1	Protein Homology	CDS	4003	4419	.	+	0	ID=cds-WP_014612791.1;Parent=gene-CYJ00_RS01860;Dbxref=GenBank:WP_014612791.1;Name=WP_014612791.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612791.1;locus_tag=CYJ00_RS01860;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014612791.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	4504	5931	.	-	.	ID=gene-CYJ00_RS01865;Name=CYJ00_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01865;old_locus_tag=CYJ00_001865
NZ_PJUS02000069.1	Protein Homology	CDS	4504	5931	.	-	0	ID=cds-WP_015729759.1;Parent=gene-CYJ00_RS01865;Dbxref=GenBank:WP_015729759.1;Name=WP_015729759.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612792.1;locus_tag=CYJ00_RS01865;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_015729759.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	6194	6502	.	-	.	ID=gene-CYJ00_RS01870;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=CYJ00_RS01870;old_locus_tag=CYJ00_001870
NZ_PJUS02000069.1	Protein Homology	CDS	6194	6502	.	-	0	ID=cds-WP_037542108.1;Parent=gene-CYJ00_RS01870;Dbxref=GenBank:WP_037542108.1;Name=WP_037542108.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612793.1;locus_tag=CYJ00_RS01870;product=SPIN family peroxidase inhibitor;protein_id=WP_037542108.1;transl_table=11
NZ_PJUS02000069.1	RefSeq	gene	6877	7311	.	-	.	ID=gene-CYJ00_RS01875;Name=CYJ00_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01875;old_locus_tag=CYJ00_001875
NZ_PJUS02000069.1	Protein Homology	CDS	6877	7311	.	-	0	ID=cds-WP_014612794.1;Parent=gene-CYJ00_RS01875;Dbxref=GenBank:WP_014612794.1;Name=WP_014612794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=CYJ00_RS01875;product=Hsp20/alpha crystallin family protein;protein_id=WP_014612794.1;transl_table=11
##sequence-region NZ_PJUS02000388.1 1 5722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000388.1	RefSeq	region	1	5722	.	+	.	ID=NZ_PJUS02000388.1:1..5722;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000388.1	RefSeq	gene	334	1782	.	-	.	ID=gene-CYJ00_RS11480;Name=CYJ00_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11480;old_locus_tag=CYJ00_011485
NZ_PJUS02000388.1	Protein Homology	CDS	334	1782	.	-	0	ID=cds-WP_101457857.1;Parent=gene-CYJ00_RS11480;Dbxref=GenBank:WP_101457857.1;Name=WP_101457857.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614607.1;locus_tag=CYJ00_RS11480;product=MDR family MFS transporter;protein_id=WP_101457857.1;transl_table=11
NZ_PJUS02000388.1	RefSeq	gene	2067	2564	.	-	.	ID=gene-CYJ00_RS11485;Name=CYJ00_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11485;old_locus_tag=CYJ00_011490
NZ_PJUS02000388.1	Protein Homology	CDS	2067	2564	.	-	0	ID=cds-WP_014614608.1;Parent=gene-CYJ00_RS11485;Dbxref=GenBank:WP_014614608.1;Name=WP_014614608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614608.1;locus_tag=CYJ00_RS11485;product=hypothetical protein;protein_id=WP_014614608.1;transl_table=11
NZ_PJUS02000388.1	RefSeq	gene	2731	3747	.	-	.	ID=gene-CYJ00_RS11490;Name=CYJ00_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11490;old_locus_tag=CYJ00_011495
NZ_PJUS02000388.1	Protein Homology	CDS	2731	3747	.	-	0	ID=cds-WP_065354541.1;Parent=gene-CYJ00_RS11490;Dbxref=GenBank:WP_065354541.1;Name=WP_065354541.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=CYJ00_RS11490;product=FecCD family ABC transporter permease;protein_id=WP_065354541.1;transl_table=11
NZ_PJUS02000388.1	RefSeq	gene	3744	4748	.	-	.	ID=gene-CYJ00_RS11495;Name=CYJ00_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11495;old_locus_tag=CYJ00_011500
NZ_PJUS02000388.1	Protein Homology	CDS	3744	4748	.	-	0	ID=cds-WP_015728704.1;Parent=gene-CYJ00_RS11495;Dbxref=GenBank:WP_015728704.1;Name=WP_015728704.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168605.1;locus_tag=CYJ00_RS11495;product=FecCD family ABC transporter permease;protein_id=WP_015728704.1;transl_table=11
NZ_PJUS02000388.1	RefSeq	gene	4774	5577	.	-	.	ID=gene-CYJ00_RS11500;Name=CYJ00_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11500;old_locus_tag=CYJ00_011505
NZ_PJUS02000388.1	Protein Homology	CDS	4774	5577	.	-	0	ID=cds-WP_014614611.1;Parent=gene-CYJ00_RS11500;Dbxref=GenBank:WP_014614611.1;Name=WP_014614611.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166215.1;locus_tag=CYJ00_RS11500;product=ABC transporter ATP-binding protein;protein_id=WP_014614611.1;transl_table=11
##sequence-region NZ_PJUS02000262.1 1 4177
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000262.1	RefSeq	region	1	4177	.	+	.	ID=NZ_PJUS02000262.1:1..4177;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000262.1	RefSeq	gene	399	1496	.	-	.	ID=gene-CYJ00_RS07100;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CYJ00_RS07100;old_locus_tag=CYJ00_007105
NZ_PJUS02000262.1	Protein Homology	CDS	399	1496	.	-	0	ID=cds-WP_014614930.1;Parent=gene-CYJ00_RS07100;Dbxref=GenBank:WP_014614930.1;Name=WP_014614930.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CYJ00_RS07100;product=redox-regulated ATPase YchF;protein_id=WP_014614930.1;transl_table=11
NZ_PJUS02000262.1	RefSeq	gene	1487	1708	.	-	.	ID=gene-CYJ00_RS07105;Name=CYJ00_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07105;old_locus_tag=CYJ00_007110
NZ_PJUS02000262.1	Protein Homology	CDS	1487	1708	.	-	0	ID=cds-WP_014614931.1;Parent=gene-CYJ00_RS07105;Dbxref=GenBank:WP_014614931.1;Name=WP_014614931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614931.1;locus_tag=CYJ00_RS07105;product=DUF951 domain-containing protein;protein_id=WP_014614931.1;transl_table=11
NZ_PJUS02000262.1	RefSeq	gene	1721	2611	.	-	.	ID=gene-CYJ00_RS07110;Name=CYJ00_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07110;old_locus_tag=CYJ00_007115
NZ_PJUS02000262.1	Protein Homology	CDS	1721	2611	.	-	0	ID=cds-WP_014614932.1;Parent=gene-CYJ00_RS07110;Dbxref=GenBank:WP_014614932.1;Name=WP_014614932.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169154.1;locus_tag=CYJ00_RS07110;product=mechanosensitive ion channel family protein;protein_id=WP_014614932.1;transl_table=11
NZ_PJUS02000262.1	RefSeq	gene	2677	3627	.	-	.	ID=gene-CYJ00_RS07115;Name=CYJ00_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07115;old_locus_tag=CYJ00_007120
NZ_PJUS02000262.1	Protein Homology	CDS	2677	3627	.	-	0	ID=cds-WP_101457858.1;Parent=gene-CYJ00_RS07115;Dbxref=GenBank:WP_101457858.1;Name=WP_101457858.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614933.1;locus_tag=CYJ00_RS07115;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_101457858.1;transl_table=11
NZ_PJUS02000262.1	cmsearch	binding_site	3687	4001	.	+	.	ID=id-NZ_PJUS02000262.1:3687..4001;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000262.1	RefSeq	pseudogene	4066	4158	.	+	.	ID=gene-CYJ00_RS13600;Name=CYJ00_RS13600;end_range=4158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13600;partial=true;pseudo=true
NZ_PJUS02000262.1	Protein Homology	CDS	4066	4158	.	+	0	ID=cds-CYJ00_RS13600;Parent=gene-CYJ00_RS13600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498931.1;locus_tag=CYJ00_RS13600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000150.1 1 6621
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000150.1	RefSeq	region	1	6621	.	+	.	ID=NZ_PJUS02000150.1:1..6621;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000150.1	RefSeq	gene	207	1382	.	+	.	ID=gene-CYJ00_RS04230;Name=CYJ00_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04230;old_locus_tag=CYJ00_004235
NZ_PJUS02000150.1	Protein Homology	CDS	207	1382	.	+	0	ID=cds-WP_063279084.1;Parent=gene-CYJ00_RS04230;Dbxref=GenBank:WP_063279084.1;Name=WP_063279084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167265.1;locus_tag=CYJ00_RS04230;product=diglucosyl diacylglycerol synthase;protein_id=WP_063279084.1;transl_table=11
NZ_PJUS02000150.1	RefSeq	gene	1360	2544	.	+	.	ID=gene-CYJ00_RS04235;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04235;old_locus_tag=CYJ00_004240
NZ_PJUS02000150.1	Protein Homology	CDS	1360	2544	.	+	0	ID=cds-WP_198597676.1;Parent=gene-CYJ00_RS04235;Dbxref=GenBank:WP_198597676.1;Name=WP_198597676.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614347.1;locus_tag=CYJ00_RS04235;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_198597676.1;transl_table=11
NZ_PJUS02000150.1	RefSeq	gene	2950	4437	.	+	.	ID=gene-CYJ00_RS04240;Name=CYJ00_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04240;old_locus_tag=CYJ00_004245
NZ_PJUS02000150.1	Protein Homology	CDS	2950	4437	.	+	0	ID=cds-WP_101457860.1;Parent=gene-CYJ00_RS04240;Dbxref=GenBank:WP_101457860.1;Name=WP_101457860.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165969.1;locus_tag=CYJ00_RS04240;product=arylsulfatase;protein_id=WP_101457860.1;transl_table=11
NZ_PJUS02000150.1	RefSeq	gene	4542	5438	.	+	.	ID=gene-CYJ00_RS04245;Name=CYJ00_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04245;old_locus_tag=CYJ00_004250
NZ_PJUS02000150.1	Protein Homology	CDS	4542	5438	.	+	0	ID=cds-WP_015728906.1;Parent=gene-CYJ00_RS04245;Dbxref=GenBank:WP_015728906.1;Name=WP_015728906.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168844.1;locus_tag=CYJ00_RS04245;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_015728906.1;transl_table=11
NZ_PJUS02000150.1	RefSeq	gene	5425	6318	.	+	.	ID=gene-CYJ00_RS04250;Name=CYJ00_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04250;old_locus_tag=CYJ00_004255
NZ_PJUS02000150.1	Protein Homology	CDS	5425	6318	.	+	0	ID=cds-WP_037543485.1;Parent=gene-CYJ00_RS04250;Dbxref=GenBank:WP_037543485.1;Name=WP_037543485.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165971.1;locus_tag=CYJ00_RS04250;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_037543485.1;transl_table=11
##sequence-region NZ_PJUS02000035.1 1 5044
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000035.1	RefSeq	region	1	5044	.	+	.	ID=NZ_PJUS02000035.1:1..5044;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000035.1	RefSeq	gene	40	114	.	-	.	ID=gene-CYJ00_RS01030;Name=CYJ00_RS01030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01030;old_locus_tag=CYJ00_001030
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	40	114	.	-	.	ID=rna-CYJ00_RS01030;Parent=gene-CYJ00_RS01030;anticodon=(pos:complement(80..82));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01030;product=tRNA-Gly
NZ_PJUS02000035.1	tRNAscan-SE	exon	40	114	.	-	.	ID=exon-CYJ00_RS01030-1;Parent=rna-CYJ00_RS01030;anticodon=(pos:complement(80..82));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01030;product=tRNA-Gly
NZ_PJUS02000035.1	RefSeq	gene	118	199	.	-	.	ID=gene-CYJ00_RS01035;Name=CYJ00_RS01035;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01035;old_locus_tag=CYJ00_001035
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	118	199	.	-	.	ID=rna-CYJ00_RS01035;Parent=gene-CYJ00_RS01035;anticodon=(pos:complement(163..165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01035;product=tRNA-Leu
NZ_PJUS02000035.1	tRNAscan-SE	exon	118	199	.	-	.	ID=exon-CYJ00_RS01035-1;Parent=rna-CYJ00_RS01035;anticodon=(pos:complement(163..165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01035;product=tRNA-Leu
NZ_PJUS02000035.1	RefSeq	gene	204	276	.	-	.	ID=gene-CYJ00_RS01040;Name=CYJ00_RS01040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01040;old_locus_tag=CYJ00_001040
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	204	276	.	-	.	ID=rna-CYJ00_RS01040;Parent=gene-CYJ00_RS01040;anticodon=(pos:complement(241..243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01040;product=tRNA-Lys
NZ_PJUS02000035.1	tRNAscan-SE	exon	204	276	.	-	.	ID=exon-CYJ00_RS01040-1;Parent=rna-CYJ00_RS01040;anticodon=(pos:complement(241..243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01040;product=tRNA-Lys
NZ_PJUS02000035.1	RefSeq	gene	283	358	.	-	.	ID=gene-CYJ00_RS01045;Name=CYJ00_RS01045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01045;old_locus_tag=CYJ00_001045
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	283	358	.	-	.	ID=rna-CYJ00_RS01045;Parent=gene-CYJ00_RS01045;anticodon=(pos:complement(323..325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01045;product=tRNA-Thr
NZ_PJUS02000035.1	tRNAscan-SE	exon	283	358	.	-	.	ID=exon-CYJ00_RS01045-1;Parent=rna-CYJ00_RS01045;anticodon=(pos:complement(323..325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01045;product=tRNA-Thr
NZ_PJUS02000035.1	RefSeq	gene	367	439	.	-	.	ID=gene-CYJ00_RS01050;Name=CYJ00_RS01050;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01050;old_locus_tag=CYJ00_001050
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	367	439	.	-	.	ID=rna-CYJ00_RS01050;Parent=gene-CYJ00_RS01050;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01050;product=tRNA-Phe
NZ_PJUS02000035.1	tRNAscan-SE	exon	367	439	.	-	.	ID=exon-CYJ00_RS01050-1;Parent=rna-CYJ00_RS01050;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01050;product=tRNA-Phe
NZ_PJUS02000035.1	RefSeq	gene	450	526	.	-	.	ID=gene-CYJ00_RS01055;Name=CYJ00_RS01055;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01055;old_locus_tag=CYJ00_001055
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	450	526	.	-	.	ID=rna-CYJ00_RS01055;Parent=gene-CYJ00_RS01055;anticodon=(pos:complement(490..492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01055;product=tRNA-Asp
NZ_PJUS02000035.1	tRNAscan-SE	exon	450	526	.	-	.	ID=exon-CYJ00_RS01055-1;Parent=rna-CYJ00_RS01055;anticodon=(pos:complement(490..492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01055;product=tRNA-Asp
NZ_PJUS02000035.1	RefSeq	gene	538	611	.	-	.	ID=gene-CYJ00_RS01060;Name=CYJ00_RS01060;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01060;old_locus_tag=CYJ00_001060
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	538	611	.	-	.	ID=rna-CYJ00_RS01060;Parent=gene-CYJ00_RS01060;anticodon=(pos:complement(575..577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01060;product=tRNA-Met
NZ_PJUS02000035.1	tRNAscan-SE	exon	538	611	.	-	.	ID=exon-CYJ00_RS01060-1;Parent=rna-CYJ00_RS01060;anticodon=(pos:complement(575..577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01060;product=tRNA-Met
NZ_PJUS02000035.1	RefSeq	gene	629	721	.	-	.	ID=gene-CYJ00_RS01065;Name=CYJ00_RS01065;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01065;old_locus_tag=CYJ00_001065
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	629	721	.	-	.	ID=rna-CYJ00_RS01065;Parent=gene-CYJ00_RS01065;anticodon=(pos:complement(683..685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01065;product=tRNA-Ser
NZ_PJUS02000035.1	tRNAscan-SE	exon	629	721	.	-	.	ID=exon-CYJ00_RS01065-1;Parent=rna-CYJ00_RS01065;anticodon=(pos:complement(683..685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01065;product=tRNA-Ser
NZ_PJUS02000035.1	RefSeq	gene	730	803	.	-	.	ID=gene-CYJ00_RS01070;Name=CYJ00_RS01070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01070;old_locus_tag=CYJ00_001070
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	730	803	.	-	.	ID=rna-CYJ00_RS01070;Parent=gene-CYJ00_RS01070;anticodon=(pos:complement(767..769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01070;product=tRNA-Ile
NZ_PJUS02000035.1	tRNAscan-SE	exon	730	803	.	-	.	ID=exon-CYJ00_RS01070-1;Parent=rna-CYJ00_RS01070;anticodon=(pos:complement(767..769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01070;product=tRNA-Ile
NZ_PJUS02000035.1	RefSeq	gene	829	902	.	-	.	ID=gene-CYJ00_RS01075;Name=CYJ00_RS01075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01075;old_locus_tag=CYJ00_001075
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	829	902	.	-	.	ID=rna-CYJ00_RS01075;Parent=gene-CYJ00_RS01075;anticodon=(pos:complement(866..868));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01075;product=tRNA-Met
NZ_PJUS02000035.1	tRNAscan-SE	exon	829	902	.	-	.	ID=exon-CYJ00_RS01075-1;Parent=rna-CYJ00_RS01075;anticodon=(pos:complement(866..868));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01075;product=tRNA-Met
NZ_PJUS02000035.1	RefSeq	gene	933	1008	.	-	.	ID=gene-CYJ00_RS01080;Name=CYJ00_RS01080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01080;old_locus_tag=CYJ00_001080
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	933	1008	.	-	.	ID=rna-CYJ00_RS01080;Parent=gene-CYJ00_RS01080;anticodon=(pos:complement(973..975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01080;product=tRNA-Ala
NZ_PJUS02000035.1	tRNAscan-SE	exon	933	1008	.	-	.	ID=exon-CYJ00_RS01080-1;Parent=rna-CYJ00_RS01080;anticodon=(pos:complement(973..975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01080;product=tRNA-Ala
NZ_PJUS02000035.1	RefSeq	gene	1031	1107	.	-	.	ID=gene-CYJ00_RS01085;Name=CYJ00_RS01085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01085;old_locus_tag=CYJ00_001085
NZ_PJUS02000035.1	tRNAscan-SE	tRNA	1031	1107	.	-	.	ID=rna-CYJ00_RS01085;Parent=gene-CYJ00_RS01085;anticodon=(pos:complement(1071..1073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01085;product=tRNA-Ile
NZ_PJUS02000035.1	tRNAscan-SE	exon	1031	1107	.	-	.	ID=exon-CYJ00_RS01085-1;Parent=rna-CYJ00_RS01085;anticodon=(pos:complement(1071..1073));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01085;product=tRNA-Ile
NZ_PJUS02000035.1	RefSeq	gene	1199	2750	.	-	.	ID=gene-CYJ00_RS01090;Name=CYJ00_RS01090;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ00_RS01090;old_locus_tag=CYJ00_001090
NZ_PJUS02000035.1	cmsearch	rRNA	1199	2750	.	-	.	ID=rna-CYJ00_RS01090;Parent=gene-CYJ00_RS01090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS01090;product=16S ribosomal RNA
NZ_PJUS02000035.1	cmsearch	exon	1199	2750	.	-	.	ID=exon-CYJ00_RS01090-1;Parent=rna-CYJ00_RS01090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS01090;product=16S ribosomal RNA
NZ_PJUS02000035.1	RefSeq	gene	3279	4343	.	-	.	ID=gene-CYJ00_RS01095;Name=CYJ00_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01095;old_locus_tag=CYJ00_001095
NZ_PJUS02000035.1	Protein Homology	CDS	3279	4343	.	-	0	ID=cds-WP_014613285.1;Parent=gene-CYJ00_RS01095;Dbxref=GenBank:WP_014613285.1;Name=WP_014613285.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=CYJ00_RS01095;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_014613285.1;transl_table=11
NZ_PJUS02000035.1	RefSeq	pseudogene	4662	5044	.	-	.	ID=gene-CYJ00_RS01100;Name=CYJ00_RS01100;end_range=5044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS01100;old_locus_tag=CYJ00_001100;partial=true;pseudo=true
NZ_PJUS02000035.1	Protein Homology	CDS	4662	5044	.	-	2	ID=cds-CYJ00_RS01100;Parent=gene-CYJ00_RS01100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ00_RS01100;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000046.1 1 8028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000046.1	RefSeq	region	1	8028	.	+	.	ID=NZ_PJUS02000046.1:1..8028;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000046.1	RefSeq	gene	194	370	.	-	.	ID=gene-CYJ00_RS01230;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CYJ00_RS01230;old_locus_tag=CYJ00_001230
NZ_PJUS02000046.1	Protein Homology	CDS	194	370	.	-	0	ID=cds-WP_002471046.1;Parent=gene-CYJ00_RS01230;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CYJ00_RS01230;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	579	1928	.	-	.	ID=gene-CYJ00_RS01235;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01235;old_locus_tag=CYJ00_001235
NZ_PJUS02000046.1	Protein Homology	CDS	579	1928	.	-	0	ID=cds-WP_015729250.1;Parent=gene-CYJ00_RS01235;Dbxref=GenBank:WP_015729250.1;Name=WP_015729250.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729250.1;locus_tag=CYJ00_RS01235;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_015729250.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	1933	2685	.	-	.	ID=gene-CYJ00_RS01240;Name=CYJ00_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01240;old_locus_tag=CYJ00_001240
NZ_PJUS02000046.1	Protein Homology	CDS	1933	2685	.	-	0	ID=cds-WP_014613779.1;Parent=gene-CYJ00_RS01240;Dbxref=GenBank:WP_014613779.1;Name=WP_014613779.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=CYJ00_RS01240;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_014613779.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	2687	3619	.	-	.	ID=gene-CYJ00_RS01245;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01245;old_locus_tag=CYJ00_001245
NZ_PJUS02000046.1	Protein Homology	CDS	2687	3619	.	-	0	ID=cds-WP_014613778.1;Parent=gene-CYJ00_RS01245;Dbxref=GenBank:WP_014613778.1;Name=WP_014613778.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613778.1;locus_tag=CYJ00_RS01245;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_014613778.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	3623	4756	.	-	.	ID=gene-CYJ00_RS01250;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS01250;old_locus_tag=CYJ00_001250
NZ_PJUS02000046.1	Protein Homology	CDS	3623	4756	.	-	0	ID=cds-WP_015729251.1;Parent=gene-CYJ00_RS01250;Dbxref=GenBank:WP_015729251.1;Name=WP_015729251.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CYJ00_RS01250;product=molecular chaperone DnaJ;protein_id=WP_015729251.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	4866	6698	.	-	.	ID=gene-CYJ00_RS01255;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CYJ00_RS01255;old_locus_tag=CYJ00_001255
NZ_PJUS02000046.1	Protein Homology	CDS	4866	6698	.	-	0	ID=cds-WP_014613776.1;Parent=gene-CYJ00_RS01255;Dbxref=GenBank:WP_014613776.1;Name=WP_014613776.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729252.1;locus_tag=CYJ00_RS01255;product=molecular chaperone DnaK;protein_id=WP_014613776.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	gene	6762	7403	.	-	.	ID=gene-CYJ00_RS01260;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CYJ00_RS01260;old_locus_tag=CYJ00_001260
NZ_PJUS02000046.1	Protein Homology	CDS	6762	7403	.	-	0	ID=cds-WP_015729253.1;Parent=gene-CYJ00_RS01260;Dbxref=GenBank:WP_015729253.1;Name=WP_015729253.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613775.1;locus_tag=CYJ00_RS01260;product=nucleotide exchange factor GrpE;protein_id=WP_015729253.1;transl_table=11
NZ_PJUS02000046.1	RefSeq	pseudogene	7418	8028	.	-	.	ID=gene-CYJ00_RS01265;Name=CYJ00_RS01265;end_range=8028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS01265;old_locus_tag=CYJ00_001265;partial=true;pseudo=true
NZ_PJUS02000046.1	Protein Homology	CDS	7418	8028	.	-	2	ID=cds-CYJ00_RS01265;Parent=gene-CYJ00_RS01265;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=CYJ00_RS01265;partial=true;product=heat-inducible transcriptional repressor HrcA;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000356.1 1 6025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000356.1	RefSeq	region	1	6025	.	+	.	ID=NZ_PJUS02000356.1:1..6025;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000356.1	RefSeq	gene	175	1662	.	-	.	ID=gene-CYJ00_RS10800;Name=CYJ00_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10800;old_locus_tag=CYJ00_010805
NZ_PJUS02000356.1	Protein Homology	CDS	175	1662	.	-	0	ID=cds-WP_101457861.1;Parent=gene-CYJ00_RS10800;Dbxref=GenBank:WP_101457861.1;Name=WP_101457861.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0046872,GO:0070006,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=manganese ion binding|0030145||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614423.1;locus_tag=CYJ00_RS10800;product=leucyl aminopeptidase family protein;protein_id=WP_101457861.1;transl_table=11
NZ_PJUS02000356.1	RefSeq	gene	1927	3129	.	-	.	ID=gene-CYJ00_RS10805;Name=CYJ00_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10805;old_locus_tag=CYJ00_010810
NZ_PJUS02000356.1	Protein Homology	CDS	1927	3129	.	-	0	ID=cds-WP_014614424.1;Parent=gene-CYJ00_RS10805;Dbxref=GenBank:WP_014614424.1;Name=WP_014614424.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=CYJ00_RS10805;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014614424.1;transl_table=11
NZ_PJUS02000356.1	RefSeq	gene	3550	3909	.	-	.	ID=gene-CYJ00_RS10810;Name=CYJ00_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10810;old_locus_tag=CYJ00_010815
NZ_PJUS02000356.1	Protein Homology	CDS	3550	3909	.	-	0	ID=cds-WP_014614425.1;Parent=gene-CYJ00_RS10810;Dbxref=GenBank:WP_014614425.1;Name=WP_014614425.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=CYJ00_RS10810;product=HesB/IscA family protein;protein_id=WP_014614425.1;transl_table=11
NZ_PJUS02000356.1	RefSeq	gene	3922	4158	.	-	.	ID=gene-CYJ00_RS10815;Name=CYJ00_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10815;old_locus_tag=CYJ00_010820
NZ_PJUS02000356.1	Protein Homology	CDS	3922	4158	.	-	0	ID=cds-WP_014614426.1;Parent=gene-CYJ00_RS10815;Dbxref=GenBank:WP_014614426.1;Name=WP_014614426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483813.1;locus_tag=CYJ00_RS10815;product=YuzB family protein;protein_id=WP_014614426.1;transl_table=11
NZ_PJUS02000356.1	RefSeq	gene	4449	5513	.	+	.	ID=gene-CYJ00_RS10820;Name=CYJ00_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10820;old_locus_tag=CYJ00_010825
NZ_PJUS02000356.1	Protein Homology	CDS	4449	5513	.	+	0	ID=cds-WP_101457862.1;Parent=gene-CYJ00_RS10820;Dbxref=GenBank:WP_101457862.1;Name=WP_101457862.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483814.1;locus_tag=CYJ00_RS10820;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101457862.1;transl_table=11
NZ_PJUS02000356.1	RefSeq	gene	5873	6025	.	-	.	ID=gene-CYJ00_RS10825;Name=CYJ00_RS10825;end_range=6025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10825;old_locus_tag=CYJ00_010830;partial=true
NZ_PJUS02000356.1	Protein Homology	CDS	5873	6025	.	-	0	ID=cds-WP_133158352.1;Parent=gene-CYJ00_RS10825;Dbxref=GenBank:WP_133158352.1;Name=WP_133158352.1;end_range=6025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614428.1;locus_tag=CYJ00_RS10825;partial=true;product=DUF1462 family protein;protein_id=WP_133158352.1;transl_table=11
##sequence-region NZ_PJUS02000194.1 1 6248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000194.1	RefSeq	region	1	6248	.	+	.	ID=NZ_PJUS02000194.1:1..6248;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000194.1	RefSeq	gene	12	956	.	+	.	ID=gene-CYJ00_RS05305;Name=CYJ00_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05305;old_locus_tag=CYJ00_005310
NZ_PJUS02000194.1	Protein Homology	CDS	12	956	.	+	0	ID=cds-WP_014613236.1;Parent=gene-CYJ00_RS05305;Dbxref=GenBank:WP_014613236.1;Name=WP_014613236.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CYJ00_RS05305;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014613236.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	973	1341	.	+	.	ID=gene-CYJ00_RS05310;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS05310;old_locus_tag=CYJ00_005315
NZ_PJUS02000194.1	Protein Homology	CDS	973	1341	.	+	0	ID=cds-WP_014613237.1;Parent=gene-CYJ00_RS05310;Dbxref=GenBank:WP_014613237.1;Name=WP_014613237.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CYJ00_RS05310;product=50S ribosomal protein L17;protein_id=WP_014613237.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	1822	2631	.	+	.	ID=gene-CYJ00_RS05315;Name=CYJ00_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05315;old_locus_tag=CYJ00_005320
NZ_PJUS02000194.1	Protein Homology	CDS	1822	2631	.	+	0	ID=cds-WP_070407675.1;Parent=gene-CYJ00_RS05315;Dbxref=GenBank:WP_070407675.1;Name=WP_070407675.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167910.1;locus_tag=CYJ00_RS05315;product=energy-coupling factor transporter ATPase;protein_id=WP_070407675.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	2628	3494	.	+	.	ID=gene-CYJ00_RS05320;Name=CYJ00_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05320;old_locus_tag=CYJ00_005325
NZ_PJUS02000194.1	Protein Homology	CDS	2628	3494	.	+	0	ID=cds-WP_101457863.1;Parent=gene-CYJ00_RS05320;Dbxref=GenBank:WP_101457863.1;Name=WP_101457863.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166626.1;locus_tag=CYJ00_RS05320;product=energy-coupling factor transporter ATPase;protein_id=WP_101457863.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	3484	4287	.	+	.	ID=gene-CYJ00_RS05325;Name=CYJ00_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05325;old_locus_tag=CYJ00_005330
NZ_PJUS02000194.1	Protein Homology	CDS	3484	4287	.	+	0	ID=cds-WP_014613240.1;Parent=gene-CYJ00_RS05325;Dbxref=GenBank:WP_014613240.1;Name=WP_014613240.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613240.1;locus_tag=CYJ00_RS05325;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_014613240.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	4303	5106	.	+	.	ID=gene-CYJ00_RS05330;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05330;old_locus_tag=CYJ00_005335
NZ_PJUS02000194.1	Protein Homology	CDS	4303	5106	.	+	0	ID=cds-WP_101457864.1;Parent=gene-CYJ00_RS05330;Dbxref=GenBank:WP_101457864.1;Name=WP_101457864.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167913.1;locus_tag=CYJ00_RS05330;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_101457864.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	5315	5752	.	+	.	ID=gene-CYJ00_RS05335;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CYJ00_RS05335;old_locus_tag=CYJ00_005340
NZ_PJUS02000194.1	Protein Homology	CDS	5315	5752	.	+	0	ID=cds-WP_014613242.1;Parent=gene-CYJ00_RS05335;Dbxref=GenBank:WP_014613242.1;Name=WP_014613242.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CYJ00_RS05335;product=50S ribosomal protein L13;protein_id=WP_014613242.1;transl_table=11
NZ_PJUS02000194.1	RefSeq	gene	5772	6164	.	+	.	ID=gene-CYJ00_RS05340;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ00_RS05340;old_locus_tag=CYJ00_005345
NZ_PJUS02000194.1	Protein Homology	CDS	5772	6164	.	+	0	ID=cds-WP_037542446.1;Parent=gene-CYJ00_RS05340;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=CYJ00_RS05340;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11
##sequence-region NZ_PJUS02000101.1 1 5655
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000101.1	RefSeq	region	1	5655	.	+	.	ID=NZ_PJUS02000101.1:1..5655;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000101.1	RefSeq	gene	1	276	.	-	.	ID=gene-CYJ00_RS02830;Name=CYJ00_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02830;old_locus_tag=CYJ00_002830;partial=true;start_range=.,1
NZ_PJUS02000101.1	Protein Homology	CDS	1	276	.	-	0	ID=cds-WP_198597672.1;Parent=gene-CYJ00_RS02830;Dbxref=GenBank:WP_198597672.1;Name=WP_198597672.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=CYJ00_RS02830;partial=true;product=ketopantoate reductase family protein;protein_id=WP_198597672.1;start_range=.,1;transl_table=11
NZ_PJUS02000101.1	RefSeq	gene	546	1925	.	+	.	ID=gene-CYJ00_RS02835;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CYJ00_RS02835;old_locus_tag=CYJ00_002835
NZ_PJUS02000101.1	Protein Homology	CDS	546	1925	.	+	0	ID=cds-WP_014612865.1;Parent=gene-CYJ00_RS02835;Dbxref=GenBank:WP_014612865.1;Name=WP_014612865.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=CYJ00_RS02835;product=hexose-6-phosphate:phosphate antiporter UhpT;protein_id=WP_014612865.1;transl_table=11
NZ_PJUS02000101.1	RefSeq	gene	2128	2871	.	-	.	ID=gene-CYJ00_RS02840;Name=CYJ00_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02840;old_locus_tag=CYJ00_002840
NZ_PJUS02000101.1	Protein Homology	CDS	2128	2871	.	-	0	ID=cds-WP_037542172.1;Parent=gene-CYJ00_RS02840;Dbxref=GenBank:WP_037542172.1;Name=WP_037542172.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612866.1;locus_tag=CYJ00_RS02840;product=response regulator transcription factor;protein_id=WP_037542172.1;transl_table=11
NZ_PJUS02000101.1	RefSeq	gene	2864	4417	.	-	.	ID=gene-CYJ00_RS02845;Name=CYJ00_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02845;old_locus_tag=CYJ00_002845
NZ_PJUS02000101.1	Protein Homology	CDS	2864	4417	.	-	0	ID=cds-WP_101457865.1;Parent=gene-CYJ00_RS02845;Dbxref=GenBank:WP_101457865.1;Name=WP_101457865.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612867.1;locus_tag=CYJ00_RS02845;product=sensor histidine kinase;protein_id=WP_101457865.1;transl_table=11
NZ_PJUS02000101.1	RefSeq	gene	4414	5367	.	-	.	ID=gene-CYJ00_RS02850;Name=CYJ00_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02850;old_locus_tag=CYJ00_002850
NZ_PJUS02000101.1	Protein Homology	CDS	4414	5367	.	-	0	ID=cds-WP_099997450.1;Parent=gene-CYJ00_RS02850;Dbxref=GenBank:WP_099997450.1;Name=WP_099997450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837111.1;locus_tag=CYJ00_RS02850;product=extracellular solute-binding protein;protein_id=WP_099997450.1;transl_table=11
##sequence-region NZ_PJUS02000268.1 1 7076
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000268.1	RefSeq	region	1	7076	.	+	.	ID=NZ_PJUS02000268.1:1..7076;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000268.1	RefSeq	gene	185	568	.	+	.	ID=gene-CYJ00_RS07245;Name=CYJ00_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07245;old_locus_tag=CYJ00_007250
NZ_PJUS02000268.1	Protein Homology	CDS	185	568	.	+	0	ID=cds-WP_014614095.1;Parent=gene-CYJ00_RS07245;Dbxref=GenBank:WP_014614095.1;Name=WP_014614095.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=CYJ00_RS07245;product=GtrA family protein;protein_id=WP_014614095.1;transl_table=11
NZ_PJUS02000268.1	RefSeq	gene	588	3197	.	+	.	ID=gene-CYJ00_RS07250;Name=CYJ00_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07250;old_locus_tag=CYJ00_007255
NZ_PJUS02000268.1	Protein Homology	CDS	588	3197	.	+	0	ID=cds-WP_101457866.1;Parent=gene-CYJ00_RS07250;Dbxref=GenBank:WP_101457866.1;Name=WP_101457866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=CYJ00_RS07250;product=YfhO family protein;protein_id=WP_101457866.1;transl_table=11
NZ_PJUS02000268.1	RefSeq	gene	3194	5788	.	+	.	ID=gene-CYJ00_RS07255;Name=CYJ00_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07255;old_locus_tag=CYJ00_007260
NZ_PJUS02000268.1	Protein Homology	CDS	3194	5788	.	+	0	ID=cds-WP_063284335.1;Parent=gene-CYJ00_RS07255;Dbxref=GenBank:WP_063284335.1;Name=WP_063284335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729034.1;locus_tag=CYJ00_RS07255;product=YfhO family protein;protein_id=WP_063284335.1;transl_table=11
NZ_PJUS02000268.1	RefSeq	gene	6016	6648	.	+	.	ID=gene-CYJ00_RS07260;Name=CYJ00_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07260;old_locus_tag=CYJ00_007265
NZ_PJUS02000268.1	Protein Homology	CDS	6016	6648	.	+	0	ID=cds-WP_063284334.1;Parent=gene-CYJ00_RS07260;Dbxref=GenBank:WP_063284334.1;Name=WP_063284334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219877.1;locus_tag=CYJ00_RS07260;product=hypothetical protein;protein_id=WP_063284334.1;transl_table=11
##sequence-region NZ_PJUS02000365.1 1 6995
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000365.1	RefSeq	region	1	6995	.	+	.	ID=NZ_PJUS02000365.1:1..6995;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000365.1	RefSeq	gene	1	372	.	-	.	ID=gene-CYJ00_RS11040;Name=CYJ00_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11040;old_locus_tag=CYJ00_011045;partial=true;start_range=.,1
NZ_PJUS02000365.1	Protein Homology	CDS	1	372	.	-	0	ID=cds-WP_133158355.1;Parent=gene-CYJ00_RS11040;Dbxref=GenBank:WP_133158355.1;Name=WP_133158355.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613498.1;locus_tag=CYJ00_RS11040;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_133158355.1;start_range=.,1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	388	702	.	-	.	ID=gene-CYJ00_RS11045;Name=CYJ00_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11045;old_locus_tag=CYJ00_011050
NZ_PJUS02000365.1	Protein Homology	CDS	388	702	.	-	0	ID=cds-WP_014613497.1;Parent=gene-CYJ00_RS11045;Dbxref=GenBank:WP_014613497.1;Name=WP_014613497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509976.1;locus_tag=CYJ00_RS11045;product=YfhH family protein;protein_id=WP_014613497.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	695	1498	.	-	.	ID=gene-CYJ00_RS11050;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CYJ00_RS11050;old_locus_tag=CYJ00_011055
NZ_PJUS02000365.1	Protein Homology	CDS	695	1498	.	-	0	ID=cds-WP_015729382.1;Parent=gene-CYJ00_RS11050;Dbxref=GenBank:WP_015729382.1;Name=WP_015729382.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=CYJ00_RS11050;product=recombination regulator RecX;protein_id=WP_015729382.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	1683	2480	.	-	.	ID=gene-CYJ00_RS11055;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=CYJ00_RS11055;old_locus_tag=CYJ00_011060
NZ_PJUS02000365.1	Protein Homology	CDS	1683	2480	.	-	0	ID=cds-WP_101457867.1;Parent=gene-CYJ00_RS11055;Dbxref=GenBank:WP_101457867.1;Name=WP_101457867.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166474.1;locus_tag=CYJ00_RS11055;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_101457867.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	2681	4426	.	+	.	ID=gene-CYJ00_RS11060;Name=CYJ00_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11060;old_locus_tag=CYJ00_011065
NZ_PJUS02000365.1	Protein Homology	CDS	2681	4426	.	+	0	ID=cds-WP_015729383.1;Parent=gene-CYJ00_RS11060;Dbxref=GenBank:WP_015729383.1;Name=WP_015729383.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=CYJ00_RS11060;product=pyruvate oxidase;protein_id=WP_015729383.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	5002	5517	.	-	.	ID=gene-CYJ00_RS11065;Name=CYJ00_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11065;old_locus_tag=CYJ00_011070
NZ_PJUS02000365.1	Protein Homology	CDS	5002	5517	.	-	0	ID=cds-WP_096533566.1;Parent=gene-CYJ00_RS11065;Dbxref=GenBank:WP_096533566.1;Name=WP_096533566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500510.1;locus_tag=CYJ00_RS11065;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_096533566.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	5593	5754	.	-	.	ID=gene-CYJ00_RS13365;Name=CYJ00_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13365
NZ_PJUS02000365.1	Protein Homology	CDS	5593	5754	.	-	0	ID=cds-WP_015729384.1;Parent=gene-CYJ00_RS13365;Dbxref=GenBank:WP_015729384.1;Name=WP_015729384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=CYJ00_RS13365;product=SE1561 family protein;protein_id=WP_015729384.1;transl_table=11
NZ_PJUS02000365.1	RefSeq	gene	5870	6995	.	+	.	ID=gene-CYJ00_RS11070;Name=yfkAB;end_range=6995,.;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CYJ00_RS11070;old_locus_tag=CYJ00_011075;partial=true
NZ_PJUS02000365.1	Protein Homology	CDS	5870	6995	.	+	0	ID=cds-WP_101457868.1;Parent=gene-CYJ00_RS11070;Dbxref=GenBank:WP_101457868.1;Name=WP_101457868.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;end_range=6995,.;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219887.1;locus_tag=CYJ00_RS11070;partial=true;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_101457868.1;transl_table=11
##sequence-region NZ_PJUS02000045.1 1 5402
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000045.1	RefSeq	region	1	5402	.	+	.	ID=NZ_PJUS02000045.1:1..5402;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000045.1	RefSeq	gene	1	677	.	-	.	ID=gene-CYJ00_RS01200;Name=CYJ00_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01200;old_locus_tag=CYJ00_001200;partial=true;start_range=.,1
NZ_PJUS02000045.1	Protein Homology	CDS	1	677	.	-	0	ID=cds-WP_101457869.1;Parent=gene-CYJ00_RS01200;Dbxref=GenBank:WP_101457869.1;Name=WP_101457869.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165728.1;locus_tag=CYJ00_RS01200;partial=true;product=ABC transporter permease;protein_id=WP_101457869.1;start_range=.,1;transl_table=11
NZ_PJUS02000045.1	RefSeq	gene	674	1546	.	-	.	ID=gene-CYJ00_RS01205;Name=CYJ00_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01205;old_locus_tag=CYJ00_001205
NZ_PJUS02000045.1	Protein Homology	CDS	674	1546	.	-	0	ID=cds-WP_015729793.1;Parent=gene-CYJ00_RS01205;Dbxref=GenBank:WP_015729793.1;Name=WP_015729793.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220079.1;locus_tag=CYJ00_RS01205;product=ABC transporter ATP-binding protein;protein_id=WP_015729793.1;transl_table=11
NZ_PJUS02000045.1	RefSeq	gene	1773	2096	.	-	.	ID=gene-CYJ00_RS01210;Name=CYJ00_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01210;old_locus_tag=CYJ00_001210
NZ_PJUS02000045.1	Protein Homology	CDS	1773	2096	.	-	0	ID=cds-WP_014612722.1;Parent=gene-CYJ00_RS01210;Dbxref=GenBank:WP_014612722.1;Name=WP_014612722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165730.1;locus_tag=CYJ00_RS01210;product=magnetosome magnetite crystal formation protein family;protein_id=WP_014612722.1;transl_table=11
NZ_PJUS02000045.1	RefSeq	gene	2691	3524	.	+	.	ID=gene-CYJ00_RS01215;Name=CYJ00_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01215;old_locus_tag=CYJ00_001215
NZ_PJUS02000045.1	Protein Homology	CDS	2691	3524	.	+	0	ID=cds-WP_101457870.1;Parent=gene-CYJ00_RS01215;Dbxref=GenBank:WP_101457870.1;Name=WP_101457870.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729791.1;locus_tag=CYJ00_RS01215;product=peptidoglycan recognition protein family protein;protein_id=WP_101457870.1;transl_table=11
NZ_PJUS02000045.1	RefSeq	gene	3579	4079	.	-	.	ID=gene-CYJ00_RS01220;Name=CYJ00_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01220;old_locus_tag=CYJ00_001220
NZ_PJUS02000045.1	Protein Homology	CDS	3579	4079	.	-	0	ID=cds-WP_014612724.1;Parent=gene-CYJ00_RS01220;Dbxref=GenBank:WP_014612724.1;Name=WP_014612724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612724.1;locus_tag=CYJ00_RS01220;product=YagU family protein;protein_id=WP_014612724.1;transl_table=11
NZ_PJUS02000045.1	RefSeq	gene	4462	5019	.	+	.	ID=gene-CYJ00_RS01225;Name=CYJ00_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01225;old_locus_tag=CYJ00_001225
NZ_PJUS02000045.1	Protein Homology	CDS	4462	5019	.	+	0	ID=cds-WP_014612725.1;Parent=gene-CYJ00_RS01225;Dbxref=GenBank:WP_014612725.1;Name=WP_014612725.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165735.1;locus_tag=CYJ00_RS01225;product=NADPH-dependent FMN reductase;protein_id=WP_014612725.1;transl_table=11
##sequence-region NZ_PJUS02000119.1 1 4129
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000119.1	RefSeq	region	1	4129	.	+	.	ID=NZ_PJUS02000119.1:1..4129;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000119.1	RefSeq	gene	90	1067	.	+	.	ID=gene-CYJ00_RS03420;Name=sbnA;gbkey=Gene;gene=sbnA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03420;old_locus_tag=CYJ00_003425
NZ_PJUS02000119.1	Protein Homology	CDS	90	1067	.	+	0	ID=cds-WP_015728690.1;Parent=gene-CYJ00_RS03420;Dbxref=GenBank:WP_015728690.1;Name=WP_015728690.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=sbnA;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614637.1;locus_tag=CYJ00_RS03420;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=WP_015728690.1;transl_table=11
NZ_PJUS02000119.1	RefSeq	gene	1069	2079	.	+	.	ID=gene-CYJ00_RS03425;Name=sbnB;gbkey=Gene;gene=sbnB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03425;old_locus_tag=CYJ00_003430
NZ_PJUS02000119.1	Protein Homology	CDS	1069	2079	.	+	0	ID=cds-WP_101457871.1;Parent=gene-CYJ00_RS03425;Dbxref=GenBank:WP_101457871.1;Name=WP_101457871.1;Ontology_term=GO:0019290,GO:0016491;gbkey=CDS;gene=sbnB;go_function=oxidoreductase activity|0016491||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614636.1;locus_tag=CYJ00_RS03425;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=WP_101457871.1;transl_table=11
NZ_PJUS02000119.1	RefSeq	gene	2091	3866	.	+	.	ID=gene-CYJ00_RS03430;Name=sbnC;gbkey=Gene;gene=sbnC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03430;old_locus_tag=CYJ00_003435
NZ_PJUS02000119.1	Protein Homology	CDS	2091	3866	.	+	0	ID=cds-WP_101457872.1;Parent=gene-CYJ00_RS03430;Dbxref=GenBank:WP_101457872.1;Name=WP_101457872.1;gbkey=CDS;gene=sbnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728691.1;locus_tag=CYJ00_RS03430;product=staphyloferrin B biosynthesis protein SbnC;protein_id=WP_101457872.1;transl_table=11
NZ_PJUS02000119.1	RefSeq	gene	3895	4129	.	+	.	ID=gene-CYJ00_RS03435;Name=CYJ00_RS03435;end_range=4129,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03435;old_locus_tag=CYJ00_003440;partial=true
NZ_PJUS02000119.1	Protein Homology	CDS	3895	4129	.	+	0	ID=cds-WP_423830912.1;Parent=gene-CYJ00_RS03435;Dbxref=GenBank:WP_423830912.1;Name=WP_423830912.1;Ontology_term=GO:0055085,GO:0022857;end_range=4129,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498678.1;locus_tag=CYJ00_RS03435;partial=true;product=MFS transporter;protein_id=WP_423830912.1;transl_table=11
##sequence-region NZ_PJUS02000229.1 1 10370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000229.1	RefSeq	region	1	10370	.	+	.	ID=NZ_PJUS02000229.1:1..10370;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000229.1	RefSeq	pseudogene	1	290	.	-	.	ID=gene-CYJ00_RS06270;Name=CYJ00_RS06270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06270;old_locus_tag=CYJ00_006275;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000229.1	Protein Homology	CDS	1	290	.	-	0	ID=cds-CYJ00_RS06270;Parent=gene-CYJ00_RS06270;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656820.1;locus_tag=CYJ00_RS06270;partial=true;product=DnaD domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	321	770	.	-	.	ID=gene-CYJ00_RS06275;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CYJ00_RS06275;old_locus_tag=CYJ00_006280
NZ_PJUS02000229.1	Protein Homology	CDS	321	770	.	-	0	ID=cds-WP_101457873.1;Parent=gene-CYJ00_RS06275;Dbxref=GenBank:WP_101457873.1;Name=WP_101457873.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528748.1;locus_tag=CYJ00_RS06275;product=single-stranded DNA-binding protein;protein_id=WP_101457873.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	763	1407	.	-	.	ID=gene-CYJ00_RS06280;Name=CYJ00_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06280;old_locus_tag=CYJ00_006285
NZ_PJUS02000229.1	Protein Homology	CDS	763	1407	.	-	0	ID=cds-WP_101457874.1;Parent=gene-CYJ00_RS06280;Dbxref=GenBank:WP_101457874.1;Name=WP_101457874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729213.1;locus_tag=CYJ00_RS06280;product=MBL fold metallo-hydrolase;protein_id=WP_101457874.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	1470	2384	.	-	.	ID=gene-CYJ00_RS06285;Name=CYJ00_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06285;old_locus_tag=CYJ00_006290
NZ_PJUS02000229.1	Protein Homology	CDS	1470	2384	.	-	0	ID=cds-WP_015729214.1;Parent=gene-CYJ00_RS06285;Dbxref=GenBank:WP_015729214.1;Name=WP_015729214.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180600.1;locus_tag=CYJ00_RS06285;product=RecT family recombinase;protein_id=WP_015729214.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	2398	2598	.	-	.	ID=gene-CYJ00_RS13925;Name=CYJ00_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13925;old_locus_tag=CYJ00_006295
NZ_PJUS02000229.1	Protein Homology	CDS	2398	2598	.	-	0	ID=cds-WP_015729215.1;Parent=gene-CYJ00_RS13925;Dbxref=GenBank:WP_015729215.1;Name=WP_015729215.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=CYJ00_RS13925;product=helix-turn-helix domain-containing protein;protein_id=WP_015729215.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	2592	4538	.	-	.	ID=gene-CYJ00_RS06295;Name=CYJ00_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06295;old_locus_tag=CYJ00_006300
NZ_PJUS02000229.1	Protein Homology	CDS	2592	4538	.	-	0	ID=cds-WP_101457875.1;Parent=gene-CYJ00_RS06295;Dbxref=GenBank:WP_101457875.1;Name=WP_101457875.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729216.1;locus_tag=CYJ00_RS06295;product=AAA family ATPase;protein_id=WP_101457875.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	4554	4811	.	-	.	ID=gene-CYJ00_RS06300;Name=CYJ00_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06300;old_locus_tag=CYJ00_006305
NZ_PJUS02000229.1	Protein Homology	CDS	4554	4811	.	-	0	ID=cds-WP_037542870.1;Parent=gene-CYJ00_RS06300;Dbxref=GenBank:WP_037542870.1;Name=WP_037542870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729217.1;locus_tag=CYJ00_RS06300;product=DUF1108 family protein;protein_id=WP_037542870.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	4891	5190	.	-	.	ID=gene-CYJ00_RS06305;Name=CYJ00_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06305;old_locus_tag=CYJ00_006310
NZ_PJUS02000229.1	Protein Homology	CDS	4891	5190	.	-	0	ID=cds-WP_157939004.1;Parent=gene-CYJ00_RS06305;Dbxref=GenBank:WP_157939004.1;Name=WP_157939004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022121.6;locus_tag=CYJ00_RS06305;product=DUF2482 family protein;protein_id=WP_157939004.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	5207	5383	.	-	.	ID=gene-CYJ00_RS13250;Name=CYJ00_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13250
NZ_PJUS02000229.1	Protein Homology	CDS	5207	5383	.	-	0	ID=cds-WP_165479882.1;Parent=gene-CYJ00_RS13250;Dbxref=GenBank:WP_165479882.1;Name=WP_165479882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729219.1;locus_tag=CYJ00_RS13250;product=hypothetical protein;protein_id=WP_165479882.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	5398	5607	.	-	.	ID=gene-CYJ00_RS06310;Name=CYJ00_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06310;old_locus_tag=CYJ00_006315
NZ_PJUS02000229.1	Protein Homology	CDS	5398	5607	.	-	0	ID=cds-WP_100006864.1;Parent=gene-CYJ00_RS06310;Dbxref=GenBank:WP_100006864.1;Name=WP_100006864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468742.1;locus_tag=CYJ00_RS06310;product=hypothetical protein;protein_id=WP_100006864.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	5677	5904	.	+	.	ID=gene-CYJ00_RS06315;Name=CYJ00_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06315;old_locus_tag=CYJ00_006320
NZ_PJUS02000229.1	GeneMarkS-2+	CDS	5677	5904	.	+	0	ID=cds-WP_096548968.1;Parent=gene-CYJ00_RS06315;Dbxref=GenBank:WP_096548968.1;Name=WP_096548968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS06315;product=hypothetical protein;protein_id=WP_096548968.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	5901	6068	.	-	.	ID=gene-CYJ00_RS13255;Name=CYJ00_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13255
NZ_PJUS02000229.1	Protein Homology	CDS	5901	6068	.	-	0	ID=cds-WP_165443333.1;Parent=gene-CYJ00_RS13255;Dbxref=GenBank:WP_165443333.1;Name=WP_165443333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500258.1;locus_tag=CYJ00_RS13255;product=hypothetical protein;protein_id=WP_165443333.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	6199	6969	.	-	.	ID=gene-CYJ00_RS06320;Name=CYJ00_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06320;old_locus_tag=CYJ00_006325
NZ_PJUS02000229.1	Protein Homology	CDS	6199	6969	.	-	0	ID=cds-WP_101457877.1;Parent=gene-CYJ00_RS06320;Dbxref=GenBank:WP_101457877.1;Name=WP_101457877.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439159.1;locus_tag=CYJ00_RS06320;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_101457877.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	7026	7526	.	+	.	ID=gene-CYJ00_RS06325;Name=CYJ00_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06325;old_locus_tag=CYJ00_006330
NZ_PJUS02000229.1	GeneMarkS-2+	CDS	7026	7526	.	+	0	ID=cds-WP_096533155.1;Parent=gene-CYJ00_RS06325;Dbxref=GenBank:WP_096533155.1;Name=WP_096533155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS06325;product=hypothetical protein;protein_id=WP_096533155.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	7483	7725	.	-	.	ID=gene-CYJ00_RS06330;Name=CYJ00_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06330;old_locus_tag=CYJ00_006335
NZ_PJUS02000229.1	GeneMarkS-2+	CDS	7483	7725	.	-	0	ID=cds-WP_100002386.1;Parent=gene-CYJ00_RS06330;Dbxref=GenBank:WP_100002386.1;Name=WP_100002386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS06330;product=hypothetical protein;protein_id=WP_100002386.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	7742	7981	.	-	.	ID=gene-CYJ00_RS06335;Name=CYJ00_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06335;old_locus_tag=CYJ00_006340
NZ_PJUS02000229.1	Protein Homology	CDS	7742	7981	.	-	0	ID=cds-WP_096548970.1;Parent=gene-CYJ00_RS06335;Dbxref=GenBank:WP_096548970.1;Name=WP_096548970.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493407.1;locus_tag=CYJ00_RS06335;product=helix-turn-helix domain-containing protein;protein_id=WP_096548970.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	8174	8506	.	+	.	ID=gene-CYJ00_RS06340;Name=CYJ00_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06340;old_locus_tag=CYJ00_006345
NZ_PJUS02000229.1	Protein Homology	CDS	8174	8506	.	+	0	ID=cds-WP_101457878.1;Parent=gene-CYJ00_RS06340;Dbxref=GenBank:WP_101457878.1;Name=WP_101457878.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170686.1;locus_tag=CYJ00_RS06340;product=helix-turn-helix domain-containing protein;protein_id=WP_101457878.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	8520	8981	.	+	.	ID=gene-CYJ00_RS06345;Name=CYJ00_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06345;old_locus_tag=CYJ00_006350
NZ_PJUS02000229.1	Protein Homology	CDS	8520	8981	.	+	0	ID=cds-WP_096636864.1;Parent=gene-CYJ00_RS06345;Dbxref=GenBank:WP_096636864.1;Name=WP_096636864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729225.1;locus_tag=CYJ00_RS06345;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_096636864.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	gene	9028	9651	.	+	.	ID=gene-CYJ00_RS06350;Name=CYJ00_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06350;old_locus_tag=CYJ00_006355
NZ_PJUS02000229.1	Protein Homology	CDS	9028	9651	.	+	0	ID=cds-WP_096548972.1;Parent=gene-CYJ00_RS06350;Dbxref=GenBank:WP_096548972.1;Name=WP_096548972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829359.1;locus_tag=CYJ00_RS06350;product=DUF4352 domain-containing protein;protein_id=WP_096548972.1;transl_table=11
NZ_PJUS02000229.1	RefSeq	pseudogene	9716	10370	.	+	.	ID=gene-CYJ00_RS06355;Name=CYJ00_RS06355;end_range=10370,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06355;old_locus_tag=CYJ00_006360;partial=true;pseudo=true
NZ_PJUS02000229.1	Protein Homology	CDS	9716	10370	.	+	0	ID=cds-CYJ00_RS06355;Parent=gene-CYJ00_RS06355;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456358.1;locus_tag=CYJ00_RS06355;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000340.1 1 4944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000340.1	RefSeq	region	1	4944	.	+	.	ID=NZ_PJUS02000340.1:1..4944;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000340.1	RefSeq	gene	12	1271	.	-	.	ID=gene-CYJ00_RS10410;Name=CYJ00_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10410;old_locus_tag=CYJ00_010420
NZ_PJUS02000340.1	Protein Homology	CDS	12	1271	.	-	0	ID=cds-WP_014613191.1;Parent=gene-CYJ00_RS10410;Dbxref=GenBank:WP_014613191.1;Name=WP_014613191.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729524.1;locus_tag=CYJ00_RS10410;product=molybdopterin molybdotransferase MoeA;protein_id=WP_014613191.1;transl_table=11
NZ_PJUS02000340.1	RefSeq	gene	1342	1827	.	+	.	ID=gene-CYJ00_RS10415;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CYJ00_RS10415;old_locus_tag=CYJ00_010425
NZ_PJUS02000340.1	Protein Homology	CDS	1342	1827	.	+	0	ID=cds-WP_014613190.1;Parent=gene-CYJ00_RS10415;Dbxref=GenBank:WP_014613190.1;Name=WP_014613190.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166598.1;locus_tag=CYJ00_RS10415;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_014613190.1;transl_table=11
NZ_PJUS02000340.1	RefSeq	gene	2087	2587	.	-	.	ID=gene-CYJ00_RS10420;Name=CYJ00_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10420;old_locus_tag=CYJ00_010430
NZ_PJUS02000340.1	Protein Homology	CDS	2087	2587	.	-	0	ID=cds-WP_014613189.1;Parent=gene-CYJ00_RS10420;Dbxref=GenBank:WP_014613189.1;Name=WP_014613189.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613189.1;locus_tag=CYJ00_RS10420;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_014613189.1;transl_table=11
NZ_PJUS02000340.1	RefSeq	gene	2603	3607	.	-	.	ID=gene-CYJ00_RS10425;Name=CYJ00_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10425;old_locus_tag=CYJ00_010435
NZ_PJUS02000340.1	Protein Homology	CDS	2603	3607	.	-	0	ID=cds-WP_014613188.1;Parent=gene-CYJ00_RS10425;Dbxref=GenBank:WP_014613188.1;Name=WP_014613188.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431689.1;locus_tag=CYJ00_RS10425;product=ThiF family adenylyltransferase;protein_id=WP_014613188.1;transl_table=11
NZ_PJUS02000340.1	RefSeq	gene	3899	4504	.	-	.	ID=gene-CYJ00_RS10430;Name=CYJ00_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10430;old_locus_tag=CYJ00_010440
NZ_PJUS02000340.1	Protein Homology	CDS	3899	4504	.	-	0	ID=cds-WP_101457879.1;Parent=gene-CYJ00_RS10430;Dbxref=GenBank:WP_101457879.1;Name=WP_101457879.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=CYJ00_RS10430;product=ATP-binding cassette domain-containing protein;protein_id=WP_101457879.1;transl_table=11
NZ_PJUS02000340.1	RefSeq	gene	4505	4944	.	-	.	ID=gene-CYJ00_RS10435;Name=CYJ00_RS10435;end_range=4944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10435;old_locus_tag=CYJ00_010445;partial=true
NZ_PJUS02000340.1	Protein Homology	CDS	4505	4944	.	-	2	ID=cds-WP_101457880.1;Parent=gene-CYJ00_RS10435;Dbxref=GenBank:WP_101457880.1;Name=WP_101457880.1;Ontology_term=GO:0015689,GO:0015098,GO:0042626,GO:0140359,GO:0016020,GO:0043190;end_range=4944,.;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166594.1;locus_tag=CYJ00_RS10435;partial=true;product=molybdate ABC transporter permease subunit;protein_id=WP_101457880.1;transl_table=11
##sequence-region NZ_PJUS02000178.1 1 19178
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000178.1	RefSeq	region	1	19178	.	+	.	ID=NZ_PJUS02000178.1:1..19178;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000178.1	RefSeq	gene	71	445	.	+	.	ID=gene-CYJ00_RS04890;Name=CYJ00_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04890;old_locus_tag=CYJ00_004895
NZ_PJUS02000178.1	Protein Homology	CDS	71	445	.	+	0	ID=cds-WP_014614132.1;Parent=gene-CYJ00_RS04890;Dbxref=GenBank:WP_014614132.1;Name=WP_014614132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=CYJ00_RS04890;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014614132.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	458	2122	.	+	.	ID=gene-CYJ00_RS04895;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04895;old_locus_tag=CYJ00_004900
NZ_PJUS02000178.1	Protein Homology	CDS	458	2122	.	+	0	ID=cds-WP_101457668.1;Parent=gene-CYJ00_RS04895;Dbxref=GenBank:WP_101457668.1;Name=WP_101457668.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303292.1;locus_tag=CYJ00_RS04895;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_101457668.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	3096	3761	.	+	.	ID=gene-CYJ00_RS04900;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04900;old_locus_tag=CYJ00_004905
NZ_PJUS02000178.1	Protein Homology	CDS	3096	3761	.	+	0	ID=cds-WP_014614130.1;Parent=gene-CYJ00_RS04900;Dbxref=GenBank:WP_014614130.1;Name=WP_014614130.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614130.1;locus_tag=CYJ00_RS04900;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_014614130.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	3780	4649	.	+	.	ID=gene-CYJ00_RS04905;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04905;old_locus_tag=CYJ00_004910
NZ_PJUS02000178.1	Protein Homology	CDS	3780	4649	.	+	0	ID=cds-WP_031254141.1;Parent=gene-CYJ00_RS04905;Dbxref=GenBank:WP_031254141.1;Name=WP_031254141.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=CYJ00_RS04905;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_031254141.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	4652	6697	.	+	.	ID=gene-CYJ00_RS04910;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04910;old_locus_tag=CYJ00_004915
NZ_PJUS02000178.1	Protein Homology	CDS	4652	6697	.	+	0	ID=cds-WP_014614128.1;Parent=gene-CYJ00_RS04910;Dbxref=GenBank:WP_014614128.1;Name=WP_014614128.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CYJ00_RS04910;product=ATP-dependent DNA helicase RecG;protein_id=WP_014614128.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	6824	7384	.	+	.	ID=gene-CYJ00_RS04915;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=CYJ00_RS04915;old_locus_tag=CYJ00_004920
NZ_PJUS02000178.1	Protein Homology	CDS	6824	7384	.	+	0	ID=cds-WP_026066989.1;Parent=gene-CYJ00_RS04915;Dbxref=GenBank:WP_026066989.1;Name=WP_026066989.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275971.1;locus_tag=CYJ00_RS04915;product=transcription factor FapR;protein_id=WP_026066989.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	7386	8372	.	+	.	ID=gene-CYJ00_RS04920;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CYJ00_RS04920;old_locus_tag=CYJ00_004925
NZ_PJUS02000178.1	Protein Homology	CDS	7386	8372	.	+	0	ID=cds-WP_063284328.1;Parent=gene-CYJ00_RS04920;Dbxref=GenBank:WP_063284328.1;Name=WP_063284328.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729017.1;locus_tag=CYJ00_RS04920;product=phosphate acyltransferase PlsX;protein_id=WP_063284328.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	8365	9291	.	+	.	ID=gene-CYJ00_RS04925;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CYJ00_RS04925;old_locus_tag=CYJ00_004930
NZ_PJUS02000178.1	Protein Homology	CDS	8365	9291	.	+	0	ID=cds-WP_101457669.1;Parent=gene-CYJ00_RS04925;Dbxref=GenBank:WP_101457669.1;Name=WP_101457669.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614125.1;locus_tag=CYJ00_RS04925;product=ACP S-malonyltransferase;protein_id=WP_101457669.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	9284	10021	.	+	.	ID=gene-CYJ00_RS04930;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04930;old_locus_tag=CYJ00_004935
NZ_PJUS02000178.1	Protein Homology	CDS	9284	10021	.	+	0	ID=cds-WP_014614124.1;Parent=gene-CYJ00_RS04930;Dbxref=GenBank:WP_014614124.1;Name=WP_014614124.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=CYJ00_RS04930;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_014614124.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	10250	10483	.	+	.	ID=gene-CYJ00_RS04935;Name=CYJ00_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04935;old_locus_tag=CYJ00_004940
NZ_PJUS02000178.1	Protein Homology	CDS	10250	10483	.	+	0	ID=cds-WP_014614123.1;Parent=gene-CYJ00_RS04935;Dbxref=GenBank:WP_014614123.1;Name=WP_014614123.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CYJ00_RS04935;product=acyl carrier protein;protein_id=WP_014614123.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	11377	12108	.	+	.	ID=gene-CYJ00_RS04940;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CYJ00_RS04940;old_locus_tag=CYJ00_004945
NZ_PJUS02000178.1	Protein Homology	CDS	11377	12108	.	+	0	ID=cds-WP_014614122.1;Parent=gene-CYJ00_RS04940;Dbxref=GenBank:WP_014614122.1;Name=WP_014614122.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165652.1;locus_tag=CYJ00_RS04940;product=ribonuclease III;protein_id=WP_014614122.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	12112	15684	.	+	.	ID=gene-CYJ00_RS04945;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CYJ00_RS04945;old_locus_tag=CYJ00_004950
NZ_PJUS02000178.1	Protein Homology	CDS	12112	15684	.	+	0	ID=cds-WP_101457670.1;Parent=gene-CYJ00_RS04945;Dbxref=GenBank:WP_101457670.1;Name=WP_101457670.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=CYJ00_RS04945;product=chromosome segregation protein SMC;protein_id=WP_101457670.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	15686	16885	.	+	.	ID=gene-CYJ00_RS04950;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CYJ00_RS04950;old_locus_tag=CYJ00_004955
NZ_PJUS02000178.1	Protein Homology	CDS	15686	16885	.	+	0	ID=cds-WP_063278821.1;Parent=gene-CYJ00_RS04950;Dbxref=GenBank:WP_063278821.1;Name=WP_063278821.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614120.1;locus_tag=CYJ00_RS04950;product=signal recognition particle-docking protein FtsY;protein_id=WP_063278821.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	16889	17224	.	+	.	ID=gene-CYJ00_RS04955;Name=CYJ00_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04955;old_locus_tag=CYJ00_004960
NZ_PJUS02000178.1	Protein Homology	CDS	16889	17224	.	+	0	ID=cds-WP_014614119.1;Parent=gene-CYJ00_RS04955;Dbxref=GenBank:WP_014614119.1;Name=WP_014614119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614119.1;locus_tag=CYJ00_RS04955;product=putative DNA-binding protein;protein_id=WP_014614119.1;transl_table=11
NZ_PJUS02000178.1	RefSeq	gene	17238	18605	.	+	.	ID=gene-CYJ00_RS04960;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CYJ00_RS04960;old_locus_tag=CYJ00_004965
NZ_PJUS02000178.1	Protein Homology	CDS	17238	18605	.	+	0	ID=cds-WP_015729019.1;Parent=gene-CYJ00_RS04960;Dbxref=GenBank:WP_015729019.1;Name=WP_015729019.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CYJ00_RS04960;product=signal recognition particle protein;protein_id=WP_015729019.1;transl_table=11
##sequence-region NZ_PJUS02000206.1 1 6252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000206.1	RefSeq	region	1	6252	.	+	.	ID=NZ_PJUS02000206.1:1..6252;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000206.1	RefSeq	gene	292	2229	.	+	.	ID=gene-CYJ00_RS05720;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CYJ00_RS05720;old_locus_tag=CYJ00_005725
NZ_PJUS02000206.1	Protein Homology	CDS	292	2229	.	+	0	ID=cds-WP_014613690.1;Parent=gene-CYJ00_RS05720;Dbxref=GenBank:WP_014613690.1;Name=WP_014613690.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=CYJ00_RS05720;product=threonine--tRNA ligase;protein_id=WP_014613690.1;transl_table=11
NZ_PJUS02000206.1	cmsearch	riboswitch	2290	2461	.	+	.	ID=id-NZ_PJUS02000206.1:2290..2461;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000206.1	RefSeq	gene	2597	4105	.	+	.	ID=gene-CYJ00_RS05725;Name=CYJ00_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05725;old_locus_tag=CYJ00_005730
NZ_PJUS02000206.1	Protein Homology	CDS	2597	4105	.	+	0	ID=cds-WP_014613691.1;Parent=gene-CYJ00_RS05725;Dbxref=GenBank:WP_014613691.1;Name=WP_014613691.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613691.1;locus_tag=CYJ00_RS05725;product=amino acid permease;protein_id=WP_014613691.1;transl_table=11
NZ_PJUS02000206.1	cmsearch	sequence_feature	4147	4283	.	+	.	ID=id-NZ_PJUS02000206.1:4147..4283;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000206.1	RefSeq	gene	4308	4835	.	+	.	ID=gene-CYJ00_RS05730;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CYJ00_RS05730;old_locus_tag=CYJ00_005735
NZ_PJUS02000206.1	Protein Homology	CDS	4308	4835	.	+	0	ID=cds-WP_014613693.1;Parent=gene-CYJ00_RS05730;Dbxref=GenBank:WP_014613693.1;Name=WP_014613693.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=CYJ00_RS05730;product=translation initiation factor IF-3;protein_id=WP_014613693.1;transl_table=11
NZ_PJUS02000206.1	RefSeq	gene	4861	5061	.	+	.	ID=gene-CYJ00_RS05735;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CYJ00_RS05735;old_locus_tag=CYJ00_005740
NZ_PJUS02000206.1	Protein Homology	CDS	4861	5061	.	+	0	ID=cds-WP_014613694.1;Parent=gene-CYJ00_RS05735;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CYJ00_RS05735;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11
NZ_PJUS02000206.1	RefSeq	gene	5136	5492	.	+	.	ID=gene-CYJ00_RS05740;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CYJ00_RS05740;old_locus_tag=CYJ00_005745
NZ_PJUS02000206.1	Protein Homology	CDS	5136	5492	.	+	0	ID=cds-WP_014613695.1;Parent=gene-CYJ00_RS05740;Dbxref=GenBank:WP_014613695.1;Name=WP_014613695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=CYJ00_RS05740;product=50S ribosomal protein L20;protein_id=WP_014613695.1;transl_table=11
NZ_PJUS02000206.1	RefSeq	gene	5602	6213	.	+	.	ID=gene-CYJ00_RS05745;Name=CYJ00_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05745;old_locus_tag=CYJ00_005750
NZ_PJUS02000206.1	Protein Homology	CDS	5602	6213	.	+	0	ID=cds-WP_014613696.1;Parent=gene-CYJ00_RS05745;Dbxref=GenBank:WP_014613696.1;Name=WP_014613696.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169473.1;locus_tag=CYJ00_RS05745;product=NUDIX domain-containing protein;protein_id=WP_014613696.1;transl_table=11
##sequence-region NZ_PJUS02000310.1 1 6346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000310.1	RefSeq	region	1	6346	.	+	.	ID=NZ_PJUS02000310.1:1..6346;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000310.1	RefSeq	gene	249	1307	.	+	.	ID=gene-CYJ00_RS08380;Name=CYJ00_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08380;old_locus_tag=CYJ00_008385
NZ_PJUS02000310.1	Protein Homology	CDS	249	1307	.	+	0	ID=cds-WP_037543770.1;Parent=gene-CYJ00_RS08380;Dbxref=GenBank:WP_037543770.1;Name=WP_037543770.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614511.1;locus_tag=CYJ00_RS08380;product=glycosyltransferase family 4 protein;protein_id=WP_037543770.1;transl_table=11
NZ_PJUS02000310.1	RefSeq	gene	1463	2098	.	-	.	ID=gene-CYJ00_RS08385;Name=CYJ00_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08385;old_locus_tag=CYJ00_008390
NZ_PJUS02000310.1	Protein Homology	CDS	1463	2098	.	-	0	ID=cds-WP_014614510.1;Parent=gene-CYJ00_RS08385;Dbxref=GenBank:WP_014614510.1;Name=WP_014614510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424513.1;locus_tag=CYJ00_RS08385;product=YigZ family protein;protein_id=WP_014614510.1;transl_table=11
NZ_PJUS02000310.1	RefSeq	gene	2396	3280	.	+	.	ID=gene-CYJ00_RS08390;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=CYJ00_RS08390;old_locus_tag=CYJ00_008395
NZ_PJUS02000310.1	Protein Homology	CDS	2396	3280	.	+	0	ID=cds-WP_041614914.1;Parent=gene-CYJ00_RS08390;Dbxref=GenBank:WP_041614914.1;Name=WP_041614914.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=CYJ00_RS08390;product=fatty acid kinase binding subunit FakB1;protein_id=WP_041614914.1;transl_table=11
NZ_PJUS02000310.1	RefSeq	gene	3435	4721	.	+	.	ID=gene-CYJ00_RS08395;Name=CYJ00_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08395;old_locus_tag=CYJ00_008400
NZ_PJUS02000310.1	Protein Homology	CDS	3435	4721	.	+	0	ID=cds-WP_015728758.1;Parent=gene-CYJ00_RS08395;Dbxref=GenBank:WP_015728758.1;Name=WP_015728758.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166120.1;locus_tag=CYJ00_RS08395;product=DEAD/DEAH box helicase family protein;protein_id=WP_015728758.1;transl_table=11
NZ_PJUS02000310.1	RefSeq	gene	4970	5386	.	+	.	ID=gene-CYJ00_RS13625;Name=CYJ00_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13625
NZ_PJUS02000310.1	GeneMarkS-2+	CDS	4970	5386	.	+	0	ID=cds-WP_225549922.1;Parent=gene-CYJ00_RS13625;Dbxref=GenBank:WP_225549922.1;Name=WP_225549922.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13625;product=ComF family protein;protein_id=WP_225549922.1;transl_table=11
NZ_PJUS02000310.1	RefSeq	gene	5451	6011	.	+	.	ID=gene-CYJ00_RS08405;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CYJ00_RS08405;old_locus_tag=CYJ00_008410
NZ_PJUS02000310.1	Protein Homology	CDS	5451	6011	.	+	0	ID=cds-WP_014614506.1;Parent=gene-CYJ00_RS08405;Dbxref=GenBank:WP_014614506.1;Name=WP_014614506.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424517.1;locus_tag=CYJ00_RS08405;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_014614506.1;transl_table=11
##sequence-region NZ_PJUS02000417.1 1 5872
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000417.1	RefSeq	region	1	5872	.	+	.	ID=NZ_PJUS02000417.1:1..5872;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000417.1	RefSeq	gene	54	539	.	+	.	ID=gene-CYJ00_RS12415;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12415;old_locus_tag=CYJ00_012420
NZ_PJUS02000417.1	Protein Homology	CDS	54	539	.	+	0	ID=cds-WP_014614161.1;Parent=gene-CYJ00_RS12415;Dbxref=GenBank:WP_014614161.1;Name=WP_014614161.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=CYJ00_RS12415;product=signal peptidase II;protein_id=WP_014614161.1;transl_table=11
NZ_PJUS02000417.1	RefSeq	gene	539	1456	.	+	.	ID=gene-CYJ00_RS12420;Name=CYJ00_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12420;old_locus_tag=CYJ00_012425
NZ_PJUS02000417.1	Protein Homology	CDS	539	1456	.	+	0	ID=cds-WP_015729003.1;Parent=gene-CYJ00_RS12420;Dbxref=GenBank:WP_015729003.1;Name=WP_015729003.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614160.1;locus_tag=CYJ00_RS12420;product=RluA family pseudouridine synthase;protein_id=WP_015729003.1;transl_table=11
NZ_PJUS02000417.1	RefSeq	gene	1742	2266	.	+	.	ID=gene-CYJ00_RS12425;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=CYJ00_RS12425;old_locus_tag=CYJ00_012430
NZ_PJUS02000417.1	Protein Homology	CDS	1742	2266	.	+	0	ID=cds-WP_014614159.1;Parent=gene-CYJ00_RS12425;Dbxref=GenBank:WP_014614159.1;Name=WP_014614159.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830167.1;locus_tag=CYJ00_RS12425;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_014614159.1;transl_table=11
NZ_PJUS02000417.1	RefSeq	gene	2444	3736	.	+	.	ID=gene-CYJ00_RS12430;Name=CYJ00_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12430;old_locus_tag=CYJ00_012435
NZ_PJUS02000417.1	Protein Homology	CDS	2444	3736	.	+	0	ID=cds-WP_100006726.1;Parent=gene-CYJ00_RS12430;Dbxref=GenBank:WP_100006726.1;Name=WP_100006726.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165552.1;locus_tag=CYJ00_RS12430;product=uracil-xanthine permease family protein;protein_id=WP_100006726.1;transl_table=11
NZ_PJUS02000417.1	RefSeq	gene	3758	4636	.	+	.	ID=gene-CYJ00_RS12435;Name=CYJ00_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12435;old_locus_tag=CYJ00_012440
NZ_PJUS02000417.1	Protein Homology	CDS	3758	4636	.	+	0	ID=cds-WP_014614157.1;Parent=gene-CYJ00_RS12435;Dbxref=GenBank:WP_014614157.1;Name=WP_014614157.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614157.1;locus_tag=CYJ00_RS12435;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014614157.1;transl_table=11
NZ_PJUS02000417.1	RefSeq	gene	4652	5872	.	+	.	ID=gene-CYJ00_RS12440;Name=pyrC;end_range=5872,.;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12440;old_locus_tag=CYJ00_012445;partial=true
NZ_PJUS02000417.1	Protein Homology	CDS	4652	5872	.	+	0	ID=cds-WP_101457881.1;Parent=gene-CYJ00_RS12440;Dbxref=GenBank:WP_101457881.1;Name=WP_101457881.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;end_range=5872,.;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=CYJ00_RS12440;partial=true;product=dihydroorotase;protein_id=WP_101457881.1;transl_table=11
##sequence-region NZ_PJUS02000326.1 1 7531
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000326.1	RefSeq	region	1	7531	.	+	.	ID=NZ_PJUS02000326.1:1..7531;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000326.1	RefSeq	gene	451	762	.	-	.	ID=gene-CYJ00_RS08725;Name=CYJ00_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08725;old_locus_tag=CYJ00_008730
NZ_PJUS02000326.1	Protein Homology	CDS	451	762	.	-	0	ID=cds-WP_015729339.1;Parent=gene-CYJ00_RS08725;Dbxref=GenBank:WP_015729339.1;Name=WP_015729339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187674.1;locus_tag=CYJ00_RS08725;product=rhodanese-like domain-containing protein;protein_id=WP_015729339.1;transl_table=11
NZ_PJUS02000326.1	RefSeq	gene	789	3203	.	-	.	ID=gene-CYJ00_RS08730;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08730;old_locus_tag=CYJ00_008735
NZ_PJUS02000326.1	Protein Homology	CDS	789	3203	.	-	0	ID=cds-WP_198597691.1;Parent=gene-CYJ00_RS08730;Dbxref=GenBank:WP_198597691.1;Name=WP_198597691.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=CYJ00_RS08730;product=leucine--tRNA ligase;protein_id=WP_198597691.1;transl_table=11
NZ_PJUS02000326.1	cmsearch	binding_site	3251	3442	.	-	.	ID=id-NZ_PJUS02000326.1:3251..3442;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000326.1	RefSeq	gene	3512	4693	.	-	.	ID=gene-CYJ00_RS08735;Name=CYJ00_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08735;old_locus_tag=CYJ00_008740
NZ_PJUS02000326.1	Protein Homology	CDS	3512	4693	.	-	0	ID=cds-WP_015729341.1;Parent=gene-CYJ00_RS08735;Dbxref=GenBank:WP_015729341.1;Name=WP_015729341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729341.1;locus_tag=CYJ00_RS08735;product=MDR family MFS transporter;protein_id=WP_015729341.1;transl_table=11
NZ_PJUS02000326.1	RefSeq	gene	4841	5794	.	+	.	ID=gene-CYJ00_RS08740;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CYJ00_RS08740;old_locus_tag=CYJ00_008745
NZ_PJUS02000326.1	Protein Homology	CDS	4841	5794	.	+	0	ID=cds-WP_101457883.1;Parent=gene-CYJ00_RS08740;Dbxref=GenBank:WP_101457883.1;Name=WP_101457883.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613608.1;locus_tag=CYJ00_RS08740;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_101457883.1;transl_table=11
NZ_PJUS02000326.1	RefSeq	gene	5791	6354	.	+	.	ID=gene-CYJ00_RS08745;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=CYJ00_RS08745;old_locus_tag=CYJ00_008750
NZ_PJUS02000326.1	Protein Homology	CDS	5791	6354	.	+	0	ID=cds-WP_101457884.1;Parent=gene-CYJ00_RS08745;Dbxref=GenBank:WP_101457884.1;Name=WP_101457884.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=CYJ00_RS08745;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_101457884.1;transl_table=11
NZ_PJUS02000326.1	RefSeq	gene	6853	7263	.	-	.	ID=gene-CYJ00_RS08750;Name=CYJ00_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08750;old_locus_tag=CYJ00_008755
NZ_PJUS02000326.1	Protein Homology	CDS	6853	7263	.	-	0	ID=cds-WP_014613606.1;Parent=gene-CYJ00_RS08750;Dbxref=GenBank:WP_014613606.1;Name=WP_014613606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613606.1;locus_tag=CYJ00_RS08750;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613606.1;transl_table=11
##sequence-region NZ_PJUS02000236.1 1 5552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000236.1	RefSeq	region	1	5552	.	+	.	ID=NZ_PJUS02000236.1:1..5552;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000236.1	RefSeq	gene	1	748	.	+	.	ID=gene-CYJ00_RS06445;Name=CYJ00_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06445;old_locus_tag=CYJ00_006450;partial=true;start_range=.,1
NZ_PJUS02000236.1	Protein Homology	CDS	1	748	.	+	1	ID=cds-WP_241956945.1;Parent=gene-CYJ00_RS06445;Dbxref=GenBank:WP_241956945.1;Name=WP_241956945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ00_RS06445;partial=true;product=Abi family protein;protein_id=WP_241956945.1;start_range=.,1;transl_table=11
NZ_PJUS02000236.1	RefSeq	gene	962	2953	.	-	.	ID=gene-CYJ00_RS06450;Name=CYJ00_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06450;old_locus_tag=CYJ00_006455
NZ_PJUS02000236.1	Protein Homology	CDS	962	2953	.	-	0	ID=cds-WP_014614918.1;Parent=gene-CYJ00_RS06450;Dbxref=GenBank:WP_014614918.1;Name=WP_014614918.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=CYJ00_RS06450;product=catalase;protein_id=WP_014614918.1;transl_table=11
NZ_PJUS02000236.1	RefSeq	gene	3347	4342	.	+	.	ID=gene-CYJ00_RS06455;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CYJ00_RS06455;old_locus_tag=CYJ00_006460
NZ_PJUS02000236.1	Protein Homology	CDS	3347	4342	.	+	0	ID=cds-WP_101457885.1;Parent=gene-CYJ00_RS06455;Dbxref=GenBank:WP_101457885.1;Name=WP_101457885.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728522.1;locus_tag=CYJ00_RS06455;product=adenosine deaminase;protein_id=WP_101457885.1;transl_table=11
NZ_PJUS02000236.1	RefSeq	gene	4500	5339	.	-	.	ID=gene-CYJ00_RS06460;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=CYJ00_RS06460;old_locus_tag=CYJ00_006465
NZ_PJUS02000236.1	Protein Homology	CDS	4500	5339	.	-	0	ID=cds-WP_014614916.1;Parent=gene-CYJ00_RS06460;Dbxref=GenBank:WP_014614916.1;Name=WP_014614916.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425688.1;locus_tag=CYJ00_RS06460;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_014614916.1;transl_table=11
NZ_PJUS02000236.1	RefSeq	pseudogene	5355	5525	.	-	.	ID=gene-CYJ00_RS06465;Name=CYJ00_RS06465;end_range=5525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06465;old_locus_tag=CYJ00_006470;partial=true;pseudo=true
NZ_PJUS02000236.1	Protein Homology	CDS	5355	5525	.	-	0	ID=cds-CYJ00_RS06465;Parent=gene-CYJ00_RS06465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CYJ00_RS06465;partial=true;product=methionine ABC transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000108.1 1 4134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000108.1	RefSeq	region	1	4134	.	+	.	ID=NZ_PJUS02000108.1:1..4134;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000108.1	RefSeq	gene	1	782	.	-	.	ID=gene-CYJ00_RS03060;Name=CYJ00_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03060;old_locus_tag=CYJ00_003065;partial=true;start_range=.,1
NZ_PJUS02000108.1	Protein Homology	CDS	1	782	.	-	0	ID=cds-WP_101457887.1;Parent=gene-CYJ00_RS03060;Dbxref=GenBank:WP_101457887.1;Name=WP_101457887.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=CYJ00_RS03060;partial=true;product=CobW family GTP-binding protein;protein_id=WP_101457887.1;start_range=.,1;transl_table=11
NZ_PJUS02000108.1	RefSeq	gene	783	1328	.	-	.	ID=gene-CYJ00_RS03065;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CYJ00_RS03065;old_locus_tag=CYJ00_003070
NZ_PJUS02000108.1	Protein Homology	CDS	783	1328	.	-	0	ID=cds-WP_014612955.1;Parent=gene-CYJ00_RS03065;Dbxref=GenBank:WP_014612955.1;Name=WP_014612955.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=CYJ00_RS03065;product=dCTP deaminase;protein_id=WP_014612955.1;transl_table=11
NZ_PJUS02000108.1	RefSeq	gene	1668	3383	.	-	.	ID=gene-CYJ00_RS03070;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03070;old_locus_tag=CYJ00_003075
NZ_PJUS02000108.1	Protein Homology	CDS	1668	3383	.	-	0	ID=cds-WP_096536063.1;Parent=gene-CYJ00_RS03070;Dbxref=GenBank:WP_096536063.1;Name=WP_096536063.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CYJ00_RS03070;product=urease subunit alpha;protein_id=WP_096536063.1;transl_table=11
NZ_PJUS02000108.1	RefSeq	gene	3380	3736	.	-	.	ID=gene-CYJ00_RS03075;Name=CYJ00_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03075;old_locus_tag=CYJ00_003080
NZ_PJUS02000108.1	Protein Homology	CDS	3380	3736	.	-	0	ID=cds-WP_014612953.1;Parent=gene-CYJ00_RS03075;Dbxref=GenBank:WP_014612953.1;Name=WP_014612953.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=CYJ00_RS03075;product=urease subunit beta;protein_id=WP_014612953.1;transl_table=11
NZ_PJUS02000108.1	RefSeq	gene	3749	4051	.	-	.	ID=gene-CYJ00_RS03080;Name=CYJ00_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03080;old_locus_tag=CYJ00_003085
NZ_PJUS02000108.1	Protein Homology	CDS	3749	4051	.	-	0	ID=cds-WP_014612952.1;Parent=gene-CYJ00_RS03080;Dbxref=GenBank:WP_014612952.1;Name=WP_014612952.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=CYJ00_RS03080;product=urease subunit gamma;protein_id=WP_014612952.1;transl_table=11
##sequence-region NZ_PJUS02000425.1 1 3828
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000425.1	RefSeq	region	1	3828	.	+	.	ID=NZ_PJUS02000425.1:1..3828;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000425.1	RefSeq	gene	106	1221	.	+	.	ID=gene-CYJ00_RS12580;Name=CYJ00_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12580;old_locus_tag=CYJ00_012585
NZ_PJUS02000425.1	Protein Homology	CDS	106	1221	.	+	0	ID=cds-WP_101457888.1;Parent=gene-CYJ00_RS12580;Dbxref=GenBank:WP_101457888.1;Name=WP_101457888.1;Ontology_term=GO:0042853,GO:0000286,GO:0051287;gbkey=CDS;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA,NAD binding|0051287||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166648.1;locus_tag=CYJ00_RS12580;product=alanine dehydrogenase;protein_id=WP_101457888.1;transl_table=11
NZ_PJUS02000425.1	RefSeq	gene	1258	2298	.	+	.	ID=gene-CYJ00_RS12585;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12585;old_locus_tag=CYJ00_012590
NZ_PJUS02000425.1	Protein Homology	CDS	1258	2298	.	+	0	ID=cds-WP_014612692.1;Parent=gene-CYJ00_RS12585;Dbxref=GenBank:WP_014612692.1;Name=WP_014612692.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210816.1;locus_tag=CYJ00_RS12585;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_014612692.1;transl_table=11
NZ_PJUS02000425.1	RefSeq	gene	2331	3653	.	+	.	ID=gene-CYJ00_RS12590;Name=CYJ00_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12590;old_locus_tag=CYJ00_012595
NZ_PJUS02000425.1	Protein Homology	CDS	2331	3653	.	+	0	ID=cds-WP_065520735.1;Parent=gene-CYJ00_RS12590;Dbxref=GenBank:WP_065520735.1;Name=WP_065520735.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612693.1;locus_tag=CYJ00_RS12590;product=APC family permease;protein_id=WP_065520735.1;transl_table=11
##sequence-region NZ_PJUS02000307.1 1 6695
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000307.1	RefSeq	region	1	6695	.	+	.	ID=NZ_PJUS02000307.1:1..6695;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000307.1	RefSeq	gene	3	611	.	+	.	ID=gene-CYJ00_RS08310;Name=CYJ00_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08310;old_locus_tag=CYJ00_008315
NZ_PJUS02000307.1	Protein Homology	CDS	3	611	.	+	0	ID=cds-WP_241956950.1;Parent=gene-CYJ00_RS08310;Dbxref=GenBank:WP_241956950.1;Name=WP_241956950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425209.1;locus_tag=CYJ00_RS08310;product=hypothetical protein;protein_id=WP_241956950.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	962	1906	.	+	.	ID=gene-CYJ00_RS08315;Name=CYJ00_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08315;old_locus_tag=CYJ00_008320
NZ_PJUS02000307.1	Protein Homology	CDS	962	1906	.	+	0	ID=cds-WP_014613785.1;Parent=gene-CYJ00_RS08315;Dbxref=GenBank:WP_014613785.1;Name=WP_014613785.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168656.1;locus_tag=CYJ00_RS08315;product=PhoH family protein;protein_id=WP_014613785.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	1910	2371	.	+	.	ID=gene-CYJ00_RS08320;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CYJ00_RS08320;old_locus_tag=CYJ00_008325
NZ_PJUS02000307.1	Protein Homology	CDS	1910	2371	.	+	0	ID=cds-WP_014613786.1;Parent=gene-CYJ00_RS08320;Dbxref=GenBank:WP_014613786.1;Name=WP_014613786.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=CYJ00_RS08320;product=rRNA maturation RNase YbeY;protein_id=WP_014613786.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	2371	2718	.	+	.	ID=gene-CYJ00_RS08325;Name=CYJ00_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08325;old_locus_tag=CYJ00_008330
NZ_PJUS02000307.1	Protein Homology	CDS	2371	2718	.	+	0	ID=cds-WP_014613787.1;Parent=gene-CYJ00_RS08325;Dbxref=GenBank:WP_014613787.1;Name=WP_014613787.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165202.1;locus_tag=CYJ00_RS08325;product=diacylglycerol kinase family protein;protein_id=WP_014613787.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	2734	3141	.	+	.	ID=gene-CYJ00_RS08330;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CYJ00_RS08330;old_locus_tag=CYJ00_008335
NZ_PJUS02000307.1	Protein Homology	CDS	2734	3141	.	+	0	ID=cds-WP_014613788.1;Parent=gene-CYJ00_RS08330;Dbxref=GenBank:WP_014613788.1;Name=WP_014613788.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165203.1;locus_tag=CYJ00_RS08330;product=cytidine deaminase;protein_id=WP_014613788.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	3138	4034	.	+	.	ID=gene-CYJ00_RS08335;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CYJ00_RS08335;old_locus_tag=CYJ00_008340
NZ_PJUS02000307.1	Protein Homology	CDS	3138	4034	.	+	0	ID=cds-WP_014613789.1;Parent=gene-CYJ00_RS08335;Dbxref=GenBank:WP_014613789.1;Name=WP_014613789.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=CYJ00_RS08335;product=GTPase Era;protein_id=WP_014613789.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	4059	4829	.	+	.	ID=gene-CYJ00_RS08340;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CYJ00_RS08340;old_locus_tag=CYJ00_008345
NZ_PJUS02000307.1	Protein Homology	CDS	4059	4829	.	+	0	ID=cds-WP_101431351.1;Parent=gene-CYJ00_RS08340;Dbxref=GenBank:WP_101431351.1;Name=WP_101431351.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=CYJ00_RS08340;product=DNA repair protein RecO;protein_id=WP_101431351.1;transl_table=11
NZ_PJUS02000307.1	RefSeq	gene	5045	6439	.	-	.	ID=gene-CYJ00_RS08345;Name=CYJ00_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08345;old_locus_tag=CYJ00_008350
NZ_PJUS02000307.1	Protein Homology	CDS	5045	6439	.	-	0	ID=cds-WP_015729245.1;Parent=gene-CYJ00_RS08345;Dbxref=GenBank:WP_015729245.1;Name=WP_015729245.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165206.1;locus_tag=CYJ00_RS08345;product=glycine--tRNA ligase;protein_id=WP_015729245.1;transl_table=11
##sequence-region NZ_PJUS02000200.1 1 6746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000200.1	RefSeq	region	1	6746	.	+	.	ID=NZ_PJUS02000200.1:1..6746;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000200.1	RefSeq	gene	41	1240	.	+	.	ID=gene-CYJ00_RS05475;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CYJ00_RS05475;old_locus_tag=CYJ00_005480
NZ_PJUS02000200.1	Protein Homology	CDS	41	1240	.	+	0	ID=cds-WP_020219664.1;Parent=gene-CYJ00_RS05475;Dbxref=GenBank:WP_020219664.1;Name=WP_020219664.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=CYJ00_RS05475;product=methionine adenosyltransferase;protein_id=WP_020219664.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	1328	2239	.	+	.	ID=gene-CYJ00_RS05480;Name=CYJ00_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05480;old_locus_tag=CYJ00_005485
NZ_PJUS02000200.1	Protein Homology	CDS	1328	2239	.	+	0	ID=cds-WP_014613585.1;Parent=gene-CYJ00_RS05480;Dbxref=GenBank:WP_014613585.1;Name=WP_014613585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219663.1;locus_tag=CYJ00_RS05480;product=NERD domain-containing protein;protein_id=WP_014613585.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	2381	3217	.	+	.	ID=gene-CYJ00_RS05485;Name=CYJ00_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05485;old_locus_tag=CYJ00_005490
NZ_PJUS02000200.1	Protein Homology	CDS	2381	3217	.	+	0	ID=cds-WP_063284448.1;Parent=gene-CYJ00_RS05485;Dbxref=GenBank:WP_063284448.1;Name=WP_063284448.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=CYJ00_RS05485;product=aldo/keto reductase;protein_id=WP_063284448.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	3319	3666	.	-	.	ID=gene-CYJ00_RS05490;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05490;old_locus_tag=CYJ00_005495
NZ_PJUS02000200.1	Protein Homology	CDS	3319	3666	.	-	0	ID=cds-WP_014613587.1;Parent=gene-CYJ00_RS05490;Dbxref=GenBank:WP_014613587.1;Name=WP_014613587.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219661.1;locus_tag=CYJ00_RS05490;product=fluoride efflux transporter CrcB;protein_id=WP_014613587.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	3663	4028	.	-	.	ID=gene-CYJ00_RS05495;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05495;old_locus_tag=CYJ00_005500
NZ_PJUS02000200.1	Protein Homology	CDS	3663	4028	.	-	0	ID=cds-WP_014613588.1;Parent=gene-CYJ00_RS05495;Dbxref=GenBank:WP_014613588.1;Name=WP_014613588.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613588.1;locus_tag=CYJ00_RS05495;product=fluoride efflux transporter CrcB;protein_id=WP_014613588.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	4061	4363	.	-	.	ID=gene-CYJ00_RS05500;Name=CYJ00_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05500;old_locus_tag=CYJ00_005505
NZ_PJUS02000200.1	Protein Homology	CDS	4061	4363	.	-	0	ID=cds-WP_014613589.1;Parent=gene-CYJ00_RS05500;Dbxref=GenBank:WP_014613589.1;Name=WP_014613589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=CYJ00_RS05500;product=hypothetical protein;protein_id=WP_014613589.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	4516	5226	.	+	.	ID=gene-CYJ00_RS05505;Name=CYJ00_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05505;old_locus_tag=CYJ00_005510
NZ_PJUS02000200.1	Protein Homology	CDS	4516	5226	.	+	0	ID=cds-WP_014613590.1;Parent=gene-CYJ00_RS05505;Dbxref=GenBank:WP_014613590.1;Name=WP_014613590.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CYJ00_RS05505;product=transaldolase;protein_id=WP_014613590.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	5393	5842	.	+	.	ID=gene-CYJ00_RS05510;Name=CYJ00_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05510;old_locus_tag=CYJ00_005515
NZ_PJUS02000200.1	Protein Homology	CDS	5393	5842	.	+	0	ID=cds-WP_014613591.1;Parent=gene-CYJ00_RS05510;Dbxref=GenBank:WP_014613591.1;Name=WP_014613591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165953.1;locus_tag=CYJ00_RS05510;product=hypothetical protein;protein_id=WP_014613591.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	5845	6276	.	-	.	ID=gene-CYJ00_RS05515;Name=CYJ00_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05515;old_locus_tag=CYJ00_005520
NZ_PJUS02000200.1	Protein Homology	CDS	5845	6276	.	-	0	ID=cds-WP_014613592.1;Parent=gene-CYJ00_RS05515;Dbxref=GenBank:WP_014613592.1;Name=WP_014613592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165954.1;locus_tag=CYJ00_RS05515;product=competence protein ComK;protein_id=WP_014613592.1;transl_table=11
NZ_PJUS02000200.1	RefSeq	gene	6279	6746	.	-	.	ID=gene-CYJ00_RS05520;Name=CYJ00_RS05520;end_range=6746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05520;old_locus_tag=CYJ00_005525;partial=true
NZ_PJUS02000200.1	Protein Homology	CDS	6279	6746	.	-	0	ID=cds-WP_241956942.1;Parent=gene-CYJ00_RS05520;Dbxref=GenBank:WP_241956942.1;Name=WP_241956942.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=6746,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425400.1;locus_tag=CYJ00_RS05520;partial=true;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_241956942.1;transl_table=11
##sequence-region NZ_PJUS02000071.1 1 4836
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000071.1	RefSeq	region	1	4836	.	+	.	ID=NZ_PJUS02000071.1:1..4836;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000071.1	RefSeq	gene	27	1511	.	+	.	ID=gene-CYJ00_RS01925;Name=CYJ00_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01925;old_locus_tag=CYJ00_001925
NZ_PJUS02000071.1	Protein Homology	CDS	27	1511	.	+	0	ID=cds-WP_063284624.1;Parent=gene-CYJ00_RS01925;Dbxref=GenBank:WP_063284624.1;Name=WP_063284624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=CYJ00_RS01925;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_063284624.1;transl_table=11
NZ_PJUS02000071.1	RefSeq	gene	1501	1740	.	+	.	ID=gene-CYJ00_RS01930;Name=CYJ00_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01930;old_locus_tag=CYJ00_001930
NZ_PJUS02000071.1	Protein Homology	CDS	1501	1740	.	+	0	ID=cds-WP_014614344.1;Parent=gene-CYJ00_RS01930;Dbxref=GenBank:WP_014614344.1;Name=WP_014614344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=CYJ00_RS01930;product=YueH family protein;protein_id=WP_014614344.1;transl_table=11
NZ_PJUS02000071.1	RefSeq	gene	1761	3323	.	+	.	ID=gene-CYJ00_RS01935;Name=CYJ00_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01935;old_locus_tag=CYJ00_001935
NZ_PJUS02000071.1	Protein Homology	CDS	1761	3323	.	+	0	ID=cds-WP_014614343.1;Parent=gene-CYJ00_RS01935;Dbxref=GenBank:WP_014614343.1;Name=WP_014614343.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=CYJ00_RS01935;product=peptide chain release factor 3;protein_id=WP_014614343.1;transl_table=11
NZ_PJUS02000071.1	RefSeq	gene	3786	4595	.	+	.	ID=gene-CYJ00_RS01940;Name=CYJ00_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01940;old_locus_tag=CYJ00_001940
NZ_PJUS02000071.1	Protein Homology	CDS	3786	4595	.	+	0	ID=cds-WP_172425808.1;Parent=gene-CYJ00_RS01940;Dbxref=GenBank:WP_172425808.1;Name=WP_172425808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614342.1;locus_tag=CYJ00_RS01940;product=TerC family protein;protein_id=WP_172425808.1;transl_table=11
##sequence-region NZ_PJUS02000140.1 1 15070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000140.1	RefSeq	region	1	15070	.	+	.	ID=NZ_PJUS02000140.1:1..15070;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000140.1	RefSeq	gene	289	570	.	-	.	ID=gene-CYJ00_RS03765;Name=CYJ00_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03765;old_locus_tag=CYJ00_003770
NZ_PJUS02000140.1	Protein Homology	CDS	289	570	.	-	0	ID=cds-WP_233275657.1;Parent=gene-CYJ00_RS03765;Dbxref=GenBank:WP_233275657.1;Name=WP_233275657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166378.1;locus_tag=CYJ00_RS03765;product=hypothetical protein;protein_id=WP_233275657.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	1091	2233	.	-	.	ID=gene-CYJ00_RS03770;Name=CYJ00_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03770;old_locus_tag=CYJ00_003775
NZ_PJUS02000140.1	Protein Homology	CDS	1091	2233	.	-	0	ID=cds-WP_014614844.1;Parent=gene-CYJ00_RS03770;Dbxref=GenBank:WP_014614844.1;Name=WP_014614844.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036666.1;locus_tag=CYJ00_RS03770;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_014614844.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	2226	3131	.	-	.	ID=gene-CYJ00_RS03775;Name=CYJ00_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03775;old_locus_tag=CYJ00_003780
NZ_PJUS02000140.1	Protein Homology	CDS	2226	3131	.	-	0	ID=cds-WP_014614845.1;Parent=gene-CYJ00_RS03775;Dbxref=GenBank:WP_014614845.1;Name=WP_014614845.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=CYJ00_RS03775;product=PLP-dependent cysteine synthase family protein;protein_id=WP_014614845.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	3414	4739	.	+	.	ID=gene-CYJ00_RS03780;Name=CYJ00_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03780;old_locus_tag=CYJ00_003785
NZ_PJUS02000140.1	Protein Homology	CDS	3414	4739	.	+	0	ID=cds-WP_014614846.1;Parent=gene-CYJ00_RS03780;Dbxref=GenBank:WP_014614846.1;Name=WP_014614846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166897.1;locus_tag=CYJ00_RS03780;product=carboxylesterase family protein;protein_id=WP_014614846.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	4889	6217	.	-	.	ID=gene-CYJ00_RS03785;Name=CYJ00_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03785;old_locus_tag=CYJ00_003790
NZ_PJUS02000140.1	Protein Homology	CDS	4889	6217	.	-	0	ID=cds-WP_014614848.1;Parent=gene-CYJ00_RS03785;Dbxref=GenBank:WP_014614848.1;Name=WP_014614848.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169210.1;locus_tag=CYJ00_RS03785;product=sodium-dependent transporter;protein_id=WP_014614848.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	6401	6589	.	+	.	ID=gene-CYJ00_RS03790;Name=CYJ00_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03790;old_locus_tag=CYJ00_003795
NZ_PJUS02000140.1	Protein Homology	CDS	6401	6589	.	+	0	ID=cds-WP_014614849.1;Parent=gene-CYJ00_RS03790;Dbxref=GenBank:WP_014614849.1;Name=WP_014614849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614849.1;locus_tag=CYJ00_RS03790;product=hypothetical protein;protein_id=WP_014614849.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	6781	7470	.	-	.	ID=gene-CYJ00_RS03795;Name=CYJ00_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03795;old_locus_tag=CYJ00_003800
NZ_PJUS02000140.1	Protein Homology	CDS	6781	7470	.	-	0	ID=cds-WP_070407720.1;Parent=gene-CYJ00_RS03795;Dbxref=GenBank:WP_070407720.1;Name=WP_070407720.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166900.1;locus_tag=CYJ00_RS03795;product=response regulator transcription factor;protein_id=WP_070407720.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	7484	10117	.	-	.	ID=gene-CYJ00_RS03800;Name=CYJ00_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03800;old_locus_tag=CYJ00_003805
NZ_PJUS02000140.1	Protein Homology	CDS	7484	10117	.	-	0	ID=cds-WP_370498300.1;Parent=gene-CYJ00_RS03800;Dbxref=GenBank:WP_370498300.1;Name=WP_370498300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190763.1;locus_tag=CYJ00_RS03800;product=sensor histidine kinase;protein_id=WP_370498300.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	10276	10356	.	+	.	ID=gene-CYJ00_RS13895;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CYJ00_RS13895;old_locus_tag=CYJ00_003810
NZ_PJUS02000140.1	Protein Homology	CDS	10276	10356	.	+	0	ID=cds-WP_064485063.1;Parent=gene-CYJ00_RS13895;Dbxref=GenBank:WP_064485063.1;Name=WP_064485063.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=CYJ00_RS13895;product=K(+)-transporting ATPase subunit F;protein_id=WP_064485063.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	10382	12058	.	+	.	ID=gene-CYJ00_RS03810;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03810;old_locus_tag=CYJ00_003815
NZ_PJUS02000140.1	Protein Homology	CDS	10382	12058	.	+	0	ID=cds-WP_015728565.1;Parent=gene-CYJ00_RS03810;Dbxref=GenBank:WP_015728565.1;Name=WP_015728565.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402656.1;locus_tag=CYJ00_RS03810;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_015728565.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	12074	14098	.	+	.	ID=gene-CYJ00_RS03815;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03815;old_locus_tag=CYJ00_003820
NZ_PJUS02000140.1	Protein Homology	CDS	12074	14098	.	+	0	ID=cds-WP_070407719.1;Parent=gene-CYJ00_RS03815;Dbxref=GenBank:WP_070407719.1;Name=WP_070407719.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802702.1;locus_tag=CYJ00_RS03815;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_070407719.1;transl_table=11
NZ_PJUS02000140.1	RefSeq	gene	14109	14669	.	+	.	ID=gene-CYJ00_RS03820;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03820;old_locus_tag=CYJ00_003825
NZ_PJUS02000140.1	Protein Homology	CDS	14109	14669	.	+	0	ID=cds-WP_096536602.1;Parent=gene-CYJ00_RS03820;Dbxref=GenBank:WP_096536602.1;Name=WP_096536602.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728563.1;locus_tag=CYJ00_RS03820;product=K(+)-transporting ATPase subunit C;protein_id=WP_096536602.1;transl_table=11
##sequence-region NZ_PJUS02000350.1 1 7723
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000350.1	RefSeq	region	1	7723	.	+	.	ID=NZ_PJUS02000350.1:1..7723;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000350.1	RefSeq	gene	50	640	.	-	.	ID=gene-CYJ00_RS10655;Name=CYJ00_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10655;old_locus_tag=CYJ00_010660
NZ_PJUS02000350.1	Protein Homology	CDS	50	640	.	-	0	ID=cds-WP_019168879.1;Parent=gene-CYJ00_RS10655;Dbxref=GenBank:WP_019168879.1;Name=WP_019168879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810447.1;locus_tag=CYJ00_RS10655;product=hypothetical protein;protein_id=WP_019168879.1;transl_table=11
NZ_PJUS02000350.1	RefSeq	gene	645	1688	.	-	.	ID=gene-CYJ00_RS10660;Name=CYJ00_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10660;old_locus_tag=CYJ00_010665
NZ_PJUS02000350.1	Protein Homology	CDS	645	1688	.	-	0	ID=cds-WP_101431672.1;Parent=gene-CYJ00_RS10660;Dbxref=GenBank:WP_101431672.1;Name=WP_101431672.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247473.1;locus_tag=CYJ00_RS10660;product=CHAP domain-containing protein;protein_id=WP_101431672.1;transl_table=11
NZ_PJUS02000350.1	RefSeq	gene	1678	3555	.	-	.	ID=gene-CYJ00_RS10665;Name=CYJ00_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10665;old_locus_tag=CYJ00_010670
NZ_PJUS02000350.1	Protein Homology	CDS	1678	3555	.	-	0	ID=cds-WP_101457891.1;Parent=gene-CYJ00_RS10665;Dbxref=GenBank:WP_101457891.1;Name=WP_101457891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681156.1;locus_tag=CYJ00_RS10665;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_101457891.1;transl_table=11
NZ_PJUS02000350.1	RefSeq	gene	3577	4971	.	-	.	ID=gene-CYJ00_RS10670;Name=CYJ00_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10670;old_locus_tag=CYJ00_010675
NZ_PJUS02000350.1	Protein Homology	CDS	3577	4971	.	-	0	ID=cds-WP_101431670.1;Parent=gene-CYJ00_RS10670;Dbxref=GenBank:WP_101431670.1;Name=WP_101431670.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168876.1;locus_tag=CYJ00_RS10670;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_101431670.1;transl_table=11
NZ_PJUS02000350.1	RefSeq	gene	4986	7481	.	-	.	ID=gene-CYJ00_RS10675;Name=CYJ00_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10675;old_locus_tag=CYJ00_010680
NZ_PJUS02000350.1	Protein Homology	CDS	4986	7481	.	-	0	ID=cds-WP_101431669.1;Parent=gene-CYJ00_RS10675;Dbxref=GenBank:WP_101431669.1;Name=WP_101431669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049261.1;locus_tag=CYJ00_RS10675;product=ATP-binding protein;protein_id=WP_101431669.1;transl_table=11
NZ_PJUS02000350.1	RefSeq	pseudogene	7516	7723	.	-	.	ID=gene-CYJ00_RS13500;Name=CYJ00_RS13500;end_range=7723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13500;old_locus_tag=CYJ00_010685;partial=true;pseudo=true
NZ_PJUS02000350.1	Protein Homology	CDS	7516	7723	.	-	1	ID=cds-CYJ00_RS13500;Parent=gene-CYJ00_RS13500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015581841.1;locus_tag=CYJ00_RS13500;partial=true;product=TcpE family conjugal transfer membrane protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000277.1 1 4892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000277.1	RefSeq	region	1	4892	.	+	.	ID=NZ_PJUS02000277.1:1..4892;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000277.1	RefSeq	gene	1	482	.	+	.	ID=gene-CYJ00_RS07395;Name=CYJ00_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07395;old_locus_tag=CYJ00_007400;partial=true;start_range=.,1
NZ_PJUS02000277.1	Protein Homology	CDS	1	482	.	+	2	ID=cds-WP_101457892.1;Parent=gene-CYJ00_RS07395;Dbxref=GenBank:WP_101457892.1;Name=WP_101457892.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=CYJ00_RS07395;partial=true;product=NAD kinase;protein_id=WP_101457892.1;start_range=.,1;transl_table=11
NZ_PJUS02000277.1	RefSeq	gene	479	1333	.	+	.	ID=gene-CYJ00_RS07400;Name=CYJ00_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07400;old_locus_tag=CYJ00_007405
NZ_PJUS02000277.1	Protein Homology	CDS	479	1333	.	+	0	ID=cds-WP_096533220.1;Parent=gene-CYJ00_RS07400;Dbxref=GenBank:WP_096533220.1;Name=WP_096533220.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=CYJ00_RS07400;product=RluA family pseudouridine synthase;protein_id=WP_096533220.1;transl_table=11
NZ_PJUS02000277.1	RefSeq	gene	1404	2747	.	+	.	ID=gene-CYJ00_RS07405;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07405;old_locus_tag=CYJ00_007410
NZ_PJUS02000277.1	Protein Homology	CDS	1404	2747	.	+	0	ID=cds-WP_233509812.1;Parent=gene-CYJ00_RS07405;Dbxref=GenBank:WP_233509812.1;Name=WP_233509812.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165978.1;locus_tag=CYJ00_RS07405;product=magnesium transporter;protein_id=WP_233509812.1;transl_table=11
NZ_PJUS02000277.1	RefSeq	gene	2758	4593	.	+	.	ID=gene-CYJ00_RS07410;Name=CYJ00_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07410;old_locus_tag=CYJ00_007415
NZ_PJUS02000277.1	Protein Homology	CDS	2758	4593	.	+	0	ID=cds-WP_101457893.1;Parent=gene-CYJ00_RS07410;Dbxref=GenBank:WP_101457893.1;Name=WP_101457893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165977.1;locus_tag=CYJ00_RS07410;product=monovalent cation:proton antiporter family protein;protein_id=WP_101457893.1;transl_table=11
NZ_PJUS02000277.1	RefSeq	gene	4740	4892	.	+	.	ID=gene-CYJ00_RS07415;Name=CYJ00_RS07415;end_range=4892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07415;old_locus_tag=CYJ00_007420;partial=true
NZ_PJUS02000277.1	Protein Homology	CDS	4740	4892	.	+	0	ID=cds-WP_341351419.1;Parent=gene-CYJ00_RS07415;Dbxref=GenBank:WP_341351419.1;Name=WP_341351419.1;end_range=4892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=CYJ00_RS07415;partial=true;product=SDR family oxidoreductase;protein_id=WP_341351419.1;transl_table=11
##sequence-region NZ_PJUS02000016.1 1 5103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000016.1	RefSeq	region	1	5103	.	+	.	ID=NZ_PJUS02000016.1:1..5103;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000016.1	RefSeq	gene	1	618	.	+	.	ID=gene-CYJ00_RS00475;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CYJ00_RS00475;old_locus_tag=CYJ00_000475;partial=true;start_range=.,1
NZ_PJUS02000016.1	Protein Homology	CDS	1	618	.	+	0	ID=cds-WP_101457894.1;Parent=gene-CYJ00_RS00475;Dbxref=GenBank:WP_101457894.1;Name=WP_101457894.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614151.1;locus_tag=CYJ00_RS00475;partial=true;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_101457894.1;start_range=.,1;transl_table=11
NZ_PJUS02000016.1	RefSeq	gene	606	1214	.	+	.	ID=gene-CYJ00_RS00480;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CYJ00_RS00480;old_locus_tag=CYJ00_000480
NZ_PJUS02000016.1	Protein Homology	CDS	606	1214	.	+	0	ID=cds-WP_014614150.1;Parent=gene-CYJ00_RS00480;Dbxref=GenBank:WP_014614150.1;Name=WP_014614150.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=CYJ00_RS00480;product=orotate phosphoribosyltransferase;protein_id=WP_014614150.1;transl_table=11
NZ_PJUS02000016.1	RefSeq	gene	1649	2062	.	+	.	ID=gene-CYJ00_RS00485;Name=CYJ00_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00485;old_locus_tag=CYJ00_000485
NZ_PJUS02000016.1	Protein Homology	CDS	1649	2062	.	+	0	ID=cds-WP_014614149.1;Parent=gene-CYJ00_RS00485;Dbxref=GenBank:WP_014614149.1;Name=WP_014614149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=CYJ00_RS00485;product=VOC family protein;protein_id=WP_014614149.1;transl_table=11
NZ_PJUS02000016.1	RefSeq	gene	2146	3849	.	-	.	ID=gene-CYJ00_RS00490;Name=CYJ00_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00490;old_locus_tag=CYJ00_000490
NZ_PJUS02000016.1	Protein Homology	CDS	2146	3849	.	-	0	ID=cds-WP_065354400.1;Parent=gene-CYJ00_RS00490;Dbxref=GenBank:WP_065354400.1;Name=WP_065354400.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729006.1;locus_tag=CYJ00_RS00490;product=Rqc2 family fibronectin-binding protein;protein_id=WP_065354400.1;transl_table=11
NZ_PJUS02000016.1	RefSeq	gene	4009	4632	.	+	.	ID=gene-CYJ00_RS00495;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CYJ00_RS00495;old_locus_tag=CYJ00_000495
NZ_PJUS02000016.1	Protein Homology	CDS	4009	4632	.	+	0	ID=cds-WP_014614147.1;Parent=gene-CYJ00_RS00495;Dbxref=GenBank:WP_014614147.1;Name=WP_014614147.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=CYJ00_RS00495;product=guanylate kinase;protein_id=WP_014614147.1;transl_table=11
NZ_PJUS02000016.1	RefSeq	gene	4632	4841	.	+	.	ID=gene-CYJ00_RS00500;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS00500;old_locus_tag=CYJ00_000500
NZ_PJUS02000016.1	Protein Homology	CDS	4632	4841	.	+	0	ID=cds-WP_014614146.1;Parent=gene-CYJ00_RS00500;Dbxref=GenBank:WP_014614146.1;Name=WP_014614146.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=CYJ00_RS00500;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_014614146.1;transl_table=11
##sequence-region NZ_PJUS02000342.1 1 8465
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000342.1	RefSeq	region	1	8465	.	+	.	ID=NZ_PJUS02000342.1:1..8465;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000342.1	RefSeq	gene	25	999	.	+	.	ID=gene-CYJ00_RS10485;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10485;old_locus_tag=CYJ00_010495
NZ_PJUS02000342.1	Protein Homology	CDS	25	999	.	+	0	ID=cds-WP_014613820.1;Parent=gene-CYJ00_RS10485;Dbxref=GenBank:WP_014613820.1;Name=WP_014613820.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165230.1;locus_tag=CYJ00_RS10485;product=competence type IV pilus ATPase ComGA;protein_id=WP_014613820.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	968	2035	.	+	.	ID=gene-CYJ00_RS10490;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10490;old_locus_tag=CYJ00_010500
NZ_PJUS02000342.1	Protein Homology	CDS	968	2035	.	+	0	ID=cds-WP_063284398.1;Parent=gene-CYJ00_RS10490;Dbxref=GenBank:WP_063284398.1;Name=WP_063284398.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=CYJ00_RS10490;product=competence type IV pilus assembly protein ComGB;protein_id=WP_063284398.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	2048	2371	.	+	.	ID=gene-CYJ00_RS10495;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=CYJ00_RS10495;old_locus_tag=CYJ00_010505
NZ_PJUS02000342.1	Protein Homology	CDS	2048	2371	.	+	0	ID=cds-WP_015729165.1;Parent=gene-CYJ00_RS10495;Dbxref=GenBank:WP_015729165.1;Name=WP_015729165.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165232.1;locus_tag=CYJ00_RS10495;product=competence type IV pilus major pilin ComGC;protein_id=WP_015729165.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	2349	2789	.	+	.	ID=gene-CYJ00_RS10500;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=CYJ00_RS10500;old_locus_tag=CYJ00_010510
NZ_PJUS02000342.1	Protein Homology	CDS	2349	2789	.	+	0	ID=cds-WP_063284397.1;Parent=gene-CYJ00_RS10500;Dbxref=GenBank:WP_063284397.1;Name=WP_063284397.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729164.1;locus_tag=CYJ00_RS10500;product=competence type IV pilus minor pilin ComGD;protein_id=WP_063284397.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	2894	3094	.	+	.	ID=gene-CYJ00_RS10505;Name=CYJ00_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10505;old_locus_tag=CYJ00_010515
NZ_PJUS02000342.1	Protein Homology	CDS	2894	3094	.	+	0	ID=cds-WP_020219623.1;Parent=gene-CYJ00_RS10505;Dbxref=GenBank:WP_020219623.1;Name=WP_020219623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219623.1;locus_tag=CYJ00_RS10505;product=hypothetical protein;protein_id=WP_020219623.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	3000	3485	.	+	.	ID=gene-CYJ00_RS10510;Name=CYJ00_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10510;old_locus_tag=CYJ00_010520
NZ_PJUS02000342.1	Protein Homology	CDS	3000	3485	.	+	0	ID=cds-WP_080552896.1;Parent=gene-CYJ00_RS10510;Dbxref=GenBank:WP_080552896.1;Name=WP_080552896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=CYJ00_RS10510;product=competence type IV pilus minor pilin ComGF;protein_id=WP_080552896.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	3649	4176	.	+	.	ID=gene-CYJ00_RS10520;Name=CYJ00_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10520;old_locus_tag=CYJ00_010525
NZ_PJUS02000342.1	Protein Homology	CDS	3649	4176	.	+	0	ID=cds-WP_014613826.1;Parent=gene-CYJ00_RS10520;Dbxref=GenBank:WP_014613826.1;Name=WP_014613826.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613826.1;locus_tag=CYJ00_RS10520;product=shikimate kinase;protein_id=WP_014613826.1;transl_table=11
NZ_PJUS02000342.1	cmsearch	riboswitch	4163	4258	.	+	.	ID=id-NZ_PJUS02000342.1:4163..4258;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000342.1	RefSeq	gene	4334	5425	.	+	.	ID=gene-CYJ00_RS10525;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CYJ00_RS10525;old_locus_tag=CYJ00_010530
NZ_PJUS02000342.1	Protein Homology	CDS	4334	5425	.	+	0	ID=cds-WP_063284396.1;Parent=gene-CYJ00_RS10525;Dbxref=GenBank:WP_063284396.1;Name=WP_063284396.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636954.1;locus_tag=CYJ00_RS10525;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_063284396.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	5438	6787	.	+	.	ID=gene-CYJ00_RS10530;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10530;old_locus_tag=CYJ00_010535
NZ_PJUS02000342.1	Protein Homology	CDS	5438	6787	.	+	0	ID=cds-WP_099997513.1;Parent=gene-CYJ00_RS10530;Dbxref=GenBank:WP_099997513.1;Name=WP_099997513.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=CYJ00_RS10530;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_099997513.1;transl_table=11
NZ_PJUS02000342.1	RefSeq	gene	6777	8249	.	+	.	ID=gene-CYJ00_RS10535;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10535;old_locus_tag=CYJ00_010540
NZ_PJUS02000342.1	Protein Homology	CDS	6777	8249	.	+	0	ID=cds-WP_015729160.1;Parent=gene-CYJ00_RS10535;Dbxref=GenBank:WP_015729160.1;Name=WP_015729160.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500145.1;locus_tag=CYJ00_RS10535;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_015729160.1;transl_table=11
##sequence-region NZ_PJUS02000251.1 1 5264
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000251.1	RefSeq	region	1	5264	.	+	.	ID=NZ_PJUS02000251.1:1..5264;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000251.1	RefSeq	gene	150	764	.	+	.	ID=gene-CYJ00_RS06895;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CYJ00_RS06895;old_locus_tag=CYJ00_006900
NZ_PJUS02000251.1	Protein Homology	CDS	150	764	.	+	0	ID=cds-WP_256726599.1;Parent=gene-CYJ00_RS06895;Dbxref=GenBank:WP_256726599.1;Name=WP_256726599.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614489.1;locus_tag=CYJ00_RS06895;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_256726599.1;transl_table=11
NZ_PJUS02000251.1	RefSeq	gene	861	1358	.	+	.	ID=gene-CYJ00_RS06900;Name=CYJ00_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06900;old_locus_tag=CYJ00_006905
NZ_PJUS02000251.1	Protein Homology	CDS	861	1358	.	+	0	ID=cds-WP_014614488.1;Parent=gene-CYJ00_RS06900;Dbxref=GenBank:WP_014614488.1;Name=WP_014614488.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165690.1;locus_tag=CYJ00_RS06900;product=GNAT family N-acetyltransferase;protein_id=WP_014614488.1;transl_table=11
NZ_PJUS02000251.1	RefSeq	gene	1961	2863	.	-	.	ID=gene-CYJ00_RS06905;Name=CYJ00_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06905;old_locus_tag=CYJ00_006910
NZ_PJUS02000251.1	Protein Homology	CDS	1961	2863	.	-	0	ID=cds-WP_101457895.1;Parent=gene-CYJ00_RS06905;Dbxref=GenBank:WP_101457895.1;Name=WP_101457895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816312.1;locus_tag=CYJ00_RS06905;product=TIGR01777 family oxidoreductase;protein_id=WP_101457895.1;transl_table=11
NZ_PJUS02000251.1	RefSeq	gene	3674	4342	.	+	.	ID=gene-CYJ00_RS06910;Name=CYJ00_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06910;old_locus_tag=CYJ00_006915
NZ_PJUS02000251.1	Protein Homology	CDS	3674	4342	.	+	0	ID=cds-WP_096536132.1;Parent=gene-CYJ00_RS06910;Dbxref=GenBank:WP_096536132.1;Name=WP_096536132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614485.1;locus_tag=CYJ00_RS06910;product=DUF4887 domain-containing protein;protein_id=WP_096536132.1;transl_table=11
NZ_PJUS02000251.1	RefSeq	gene	4441	4683	.	-	.	ID=gene-CYJ00_RS06915;Name=CYJ00_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06915;old_locus_tag=CYJ00_006920
NZ_PJUS02000251.1	Protein Homology	CDS	4441	4683	.	-	0	ID=cds-WP_101457896.1;Parent=gene-CYJ00_RS06915;Dbxref=GenBank:WP_101457896.1;Name=WP_101457896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168483.1;locus_tag=CYJ00_RS06915;product=hypothetical protein;protein_id=WP_101457896.1;transl_table=11
NZ_PJUS02000251.1	RefSeq	pseudogene	4985	5264	.	+	.	ID=gene-CYJ00_RS06920;Name=CYJ00_RS06920;end_range=5264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06920;old_locus_tag=CYJ00_006925;partial=true;pseudo=true
NZ_PJUS02000251.1	Protein Homology	CDS	4985	5264	.	+	0	ID=cds-CYJ00_RS06920;Parent=gene-CYJ00_RS06920;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614484.1;locus_tag=CYJ00_RS06920;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000157.1 1 7262
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000157.1	RefSeq	region	1	7262	.	+	.	ID=NZ_PJUS02000157.1:1..7262;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000157.1	RefSeq	gene	1	454	.	-	.	ID=gene-CYJ00_RS04410;Name=CYJ00_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04410;old_locus_tag=CYJ00_004415;partial=true;start_range=.,1
NZ_PJUS02000157.1	Protein Homology	CDS	1	454	.	-	0	ID=cds-WP_101457897.1;Parent=gene-CYJ00_RS04410;Dbxref=GenBank:WP_101457897.1;Name=WP_101457897.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613814.1;locus_tag=CYJ00_RS04410;partial=true;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_101457897.1;start_range=.,1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	604	768	.	-	.	ID=gene-CYJ00_RS04415;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04415;old_locus_tag=CYJ00_004420
NZ_PJUS02000157.1	Protein Homology	CDS	604	768	.	-	0	ID=cds-WP_256726578.1;Parent=gene-CYJ00_RS04415;Dbxref=GenBank:WP_256726578.1;Name=WP_256726578.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ00_RS04415;product=50S ribosomal protein L33;protein_id=WP_256726578.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	825	1475	.	-	.	ID=gene-CYJ00_RS04420;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CYJ00_RS04420;old_locus_tag=CYJ00_004425
NZ_PJUS02000157.1	Protein Homology	CDS	825	1475	.	-	0	ID=cds-WP_014613812.1;Parent=gene-CYJ00_RS04420;Dbxref=GenBank:WP_014613812.1;Name=WP_014613812.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613812.1;locus_tag=CYJ00_RS04420;product=phosphate signaling complex protein PhoU;protein_id=WP_014613812.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	1477	2319	.	-	.	ID=gene-CYJ00_RS04425;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04425;old_locus_tag=CYJ00_004430
NZ_PJUS02000157.1	Protein Homology	CDS	1477	2319	.	-	0	ID=cds-WP_014613811.1;Parent=gene-CYJ00_RS04425;Dbxref=GenBank:WP_014613811.1;Name=WP_014613811.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613811.1;locus_tag=CYJ00_RS04425;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_014613811.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	2337	3218	.	-	.	ID=gene-CYJ00_RS04430;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04430;old_locus_tag=CYJ00_004435
NZ_PJUS02000157.1	Protein Homology	CDS	2337	3218	.	-	0	ID=cds-WP_014613810.1;Parent=gene-CYJ00_RS04430;Dbxref=GenBank:WP_014613810.1;Name=WP_014613810.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219627.1;locus_tag=CYJ00_RS04430;product=phosphate ABC transporter permease PstA;protein_id=WP_014613810.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	3218	4144	.	-	.	ID=gene-CYJ00_RS04435;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04435;old_locus_tag=CYJ00_004440
NZ_PJUS02000157.1	Protein Homology	CDS	3218	4144	.	-	0	ID=cds-WP_014613809.1;Parent=gene-CYJ00_RS04435;Dbxref=GenBank:WP_014613809.1;Name=WP_014613809.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204623.1;locus_tag=CYJ00_RS04435;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_014613809.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	4262	5221	.	-	.	ID=gene-CYJ00_RS04440;Name=CYJ00_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04440;old_locus_tag=CYJ00_004445
NZ_PJUS02000157.1	Protein Homology	CDS	4262	5221	.	-	0	ID=cds-WP_015729236.1;Parent=gene-CYJ00_RS04440;Dbxref=GenBank:WP_015729236.1;Name=WP_015729236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219629.1;locus_tag=CYJ00_RS04440;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_015729236.1;transl_table=11
NZ_PJUS02000157.1	RefSeq	gene	5490	7262	.	-	.	ID=gene-CYJ00_RS04445;Name=CYJ00_RS04445;end_range=7262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04445;old_locus_tag=CYJ00_004450;partial=true
NZ_PJUS02000157.1	Protein Homology	CDS	5490	7262	.	-	0	ID=cds-WP_101457898.1;Parent=gene-CYJ00_RS04445;Dbxref=GenBank:WP_101457898.1;Name=WP_101457898.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;end_range=7262,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613807.1;locus_tag=CYJ00_RS04445;partial=true;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_101457898.1;transl_table=11
##sequence-region NZ_PJUS02000030.1 1 5397
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000030.1	RefSeq	region	1	5397	.	+	.	ID=NZ_PJUS02000030.1:1..5397;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000030.1	RefSeq	gene	1	313	.	-	.	ID=gene-CYJ00_RS00850;Name=CYJ00_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00850;old_locus_tag=CYJ00_000850;partial=true;start_range=.,1
NZ_PJUS02000030.1	Protein Homology	CDS	1	313	.	-	0	ID=cds-WP_490327962.1;Parent=gene-CYJ00_RS00850;Dbxref=GenBank:WP_490327962.1;Name=WP_490327962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449171.1;locus_tag=CYJ00_RS00850;partial=true;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_490327962.1;start_range=.,1;transl_table=11
NZ_PJUS02000030.1	RefSeq	gene	306	1862	.	-	.	ID=gene-CYJ00_RS00855;Name=CYJ00_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00855;old_locus_tag=CYJ00_000855
NZ_PJUS02000030.1	Protein Homology	CDS	306	1862	.	-	0	ID=cds-WP_096535770.1;Parent=gene-CYJ00_RS00855;Dbxref=GenBank:WP_096535770.1;Name=WP_096535770.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028656.1;locus_tag=CYJ00_RS00855;product=type I restriction-modification system subunit M;protein_id=WP_096535770.1;transl_table=11
NZ_PJUS02000030.1	RefSeq	gene	2306	5098	.	-	.	ID=gene-CYJ00_RS00860;Name=CYJ00_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00860;old_locus_tag=CYJ00_000860
NZ_PJUS02000030.1	Protein Homology	CDS	2306	5098	.	-	0	ID=cds-WP_096535772.1;Parent=gene-CYJ00_RS00860;Dbxref=GenBank:WP_096535772.1;Name=WP_096535772.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511775.1;locus_tag=CYJ00_RS00860;product=type I restriction endonuclease subunit R;protein_id=WP_096535772.1;transl_table=11
##sequence-region NZ_PJUS02000407.1 1 4097
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000407.1	RefSeq	region	1	4097	.	+	.	ID=NZ_PJUS02000407.1:1..4097;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000407.1	RefSeq	gene	221	1192	.	+	.	ID=gene-CYJ00_RS11915;Name=CYJ00_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11915;old_locus_tag=CYJ00_011920
NZ_PJUS02000407.1	Protein Homology	CDS	221	1192	.	+	0	ID=cds-WP_101457899.1;Parent=gene-CYJ00_RS11915;Dbxref=GenBank:WP_101457899.1;Name=WP_101457899.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=CYJ00_RS11915;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_101457899.1;transl_table=11
NZ_PJUS02000407.1	RefSeq	gene	1192	2076	.	+	.	ID=gene-CYJ00_RS11920;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CYJ00_RS11920;old_locus_tag=CYJ00_011925
NZ_PJUS02000407.1	Protein Homology	CDS	1192	2076	.	+	0	ID=cds-WP_041614892.1;Parent=gene-CYJ00_RS11920;Dbxref=GenBank:WP_041614892.1;Name=WP_041614892.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612840.1;locus_tag=CYJ00_RS11920;product=ribokinase;protein_id=WP_041614892.1;transl_table=11
NZ_PJUS02000407.1	RefSeq	pseudogene	2069	2458	.	+	.	ID=gene-CYJ00_RS11925;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=CYJ00_RS11925;old_locus_tag=CYJ00_011930;pseudo=true
NZ_PJUS02000407.1	Protein Homology	CDS	2069	2458	.	+	0	ID=cds-CYJ00_RS11925;Parent=gene-CYJ00_RS11925;Note=internal stop;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=CYJ00_RS11925;product=D-ribose pyranase;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000308.1 1 6174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000308.1	RefSeq	region	1	6174	.	+	.	ID=NZ_PJUS02000308.1:1..6174;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000308.1	RefSeq	gene	50	1282	.	+	.	ID=gene-CYJ00_RS08350;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CYJ00_RS08350;old_locus_tag=CYJ00_008355
NZ_PJUS02000308.1	Protein Homology	CDS	50	1282	.	+	0	ID=cds-WP_063284349.1;Parent=gene-CYJ00_RS08350;Dbxref=GenBank:WP_063284349.1;Name=WP_063284349.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165422.1;locus_tag=CYJ00_RS08350;product=GTPase HflX;protein_id=WP_063284349.1;transl_table=11
NZ_PJUS02000308.1	RefSeq	gene	1300	2547	.	+	.	ID=gene-CYJ00_RS08355;Name=CYJ00_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08355;old_locus_tag=CYJ00_008360
NZ_PJUS02000308.1	Protein Homology	CDS	1300	2547	.	+	0	ID=cds-WP_063284350.1;Parent=gene-CYJ00_RS08355;Dbxref=GenBank:WP_063284350.1;Name=WP_063284350.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614021.1;locus_tag=CYJ00_RS08355;product=methionine gamma-lyase family protein;protein_id=WP_063284350.1;transl_table=11
NZ_PJUS02000308.1	RefSeq	gene	2723	3091	.	+	.	ID=gene-CYJ00_RS08360;Name=CYJ00_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08360;old_locus_tag=CYJ00_008365
NZ_PJUS02000308.1	Protein Homology	CDS	2723	3091	.	+	0	ID=cds-WP_014614020.1;Parent=gene-CYJ00_RS08360;Dbxref=GenBank:WP_014614020.1;Name=WP_014614020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424965.1;locus_tag=CYJ00_RS08360;product=MerR family transcriptional regulator;protein_id=WP_014614020.1;transl_table=11
NZ_PJUS02000308.1	RefSeq	gene	3115	4455	.	+	.	ID=gene-CYJ00_RS08365;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08365;old_locus_tag=CYJ00_008370
NZ_PJUS02000308.1	Protein Homology	CDS	3115	4455	.	+	0	ID=cds-WP_014614019.1;Parent=gene-CYJ00_RS08365;Dbxref=GenBank:WP_014614019.1;Name=WP_014614019.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=CYJ00_RS08365;product=type I glutamate--ammonia ligase;protein_id=WP_014614019.1;transl_table=11
NZ_PJUS02000308.1	RefSeq	gene	4636	5262	.	-	.	ID=gene-CYJ00_RS08370;Name=CYJ00_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08370;old_locus_tag=CYJ00_008375
NZ_PJUS02000308.1	Protein Homology	CDS	4636	5262	.	-	0	ID=cds-WP_233536002.1;Parent=gene-CYJ00_RS08370;Dbxref=GenBank:WP_233536002.1;Name=WP_233536002.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=CYJ00_RS08370;product=tyrosine-type recombinase/integrase;protein_id=WP_233536002.1;transl_table=11
NZ_PJUS02000308.1	RefSeq	gene	5903	6082	.	+	.	ID=gene-CYJ00_RS08375;Name=CYJ00_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08375;old_locus_tag=CYJ00_008380
NZ_PJUS02000308.1	Protein Homology	CDS	5903	6082	.	+	0	ID=cds-WP_014614017.1;Parent=gene-CYJ00_RS08375;Dbxref=GenBank:WP_014614017.1;Name=WP_014614017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614017.1;locus_tag=CYJ00_RS08375;product=DUF1381 domain-containing protein;protein_id=WP_014614017.1;transl_table=11
##sequence-region NZ_PJUS02000201.1 1 5020
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000201.1	RefSeq	region	1	5020	.	+	.	ID=NZ_PJUS02000201.1:1..5020;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000201.1	RefSeq	gene	48	368	.	+	.	ID=gene-CYJ00_RS05525;Name=CYJ00_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05525;old_locus_tag=CYJ00_005530
NZ_PJUS02000201.1	Protein Homology	CDS	48	368	.	+	0	ID=cds-WP_014613115.1;Parent=gene-CYJ00_RS05525;Dbxref=GenBank:WP_014613115.1;Name=WP_014613115.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=CYJ00_RS05525;product=PadR family transcriptional regulator;protein_id=WP_014613115.1;transl_table=11
NZ_PJUS02000201.1	RefSeq	gene	365	922	.	+	.	ID=gene-CYJ00_RS05530;Name=CYJ00_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05530;old_locus_tag=CYJ00_005535
NZ_PJUS02000201.1	Protein Homology	CDS	365	922	.	+	0	ID=cds-WP_070407365.1;Parent=gene-CYJ00_RS05530;Dbxref=GenBank:WP_070407365.1;Name=WP_070407365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167131.1;locus_tag=CYJ00_RS05530;product=HAAS signaling domain-containing protein;protein_id=WP_070407365.1;transl_table=11
NZ_PJUS02000201.1	RefSeq	gene	919	1734	.	+	.	ID=gene-CYJ00_RS05535;Name=CYJ00_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05535;old_locus_tag=CYJ00_005540
NZ_PJUS02000201.1	Protein Homology	CDS	919	1734	.	+	0	ID=cds-WP_101457900.1;Parent=gene-CYJ00_RS05535;Dbxref=GenBank:WP_101457900.1;Name=WP_101457900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729569.1;locus_tag=CYJ00_RS05535;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_101457900.1;transl_table=11
NZ_PJUS02000201.1	RefSeq	gene	1906	3240	.	+	.	ID=gene-CYJ00_RS05540;Name=CYJ00_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05540;old_locus_tag=CYJ00_005545
NZ_PJUS02000201.1	Protein Homology	CDS	1906	3240	.	+	0	ID=cds-WP_014613118.1;Parent=gene-CYJ00_RS05540;Dbxref=GenBank:WP_014613118.1;Name=WP_014613118.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613118.1;locus_tag=CYJ00_RS05540;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_014613118.1;transl_table=11
NZ_PJUS02000201.1	RefSeq	gene	3321	3929	.	-	.	ID=gene-CYJ00_RS05545;Name=CYJ00_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05545;old_locus_tag=CYJ00_005550
NZ_PJUS02000201.1	Protein Homology	CDS	3321	3929	.	-	0	ID=cds-WP_020219785.1;Parent=gene-CYJ00_RS05545;Dbxref=GenBank:WP_020219785.1;Name=WP_020219785.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613119.1;locus_tag=CYJ00_RS05545;product=DNA-3-methyladenine glycosylase;protein_id=WP_020219785.1;transl_table=11
NZ_PJUS02000201.1	RefSeq	gene	4109	4795	.	+	.	ID=gene-CYJ00_RS05550;Name=CYJ00_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05550;old_locus_tag=CYJ00_005555
NZ_PJUS02000201.1	Protein Homology	CDS	4109	4795	.	+	0	ID=cds-WP_015729567.1;Parent=gene-CYJ00_RS05550;Dbxref=GenBank:WP_015729567.1;Name=WP_015729567.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613120.1;locus_tag=CYJ00_RS05550;product=DUF805 domain-containing protein;protein_id=WP_015729567.1;transl_table=11
##sequence-region NZ_PJUS02000005.1 1 14457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000005.1	RefSeq	region	1	14457	.	+	.	ID=NZ_PJUS02000005.1:1..14457;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000005.1	RefSeq	gene	1	283	.	+	.	ID=gene-CYJ00_RS00120;Name=CYJ00_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00120;old_locus_tag=CYJ00_000120;partial=true;start_range=.,1
NZ_PJUS02000005.1	Protein Homology	CDS	1	283	.	+	1	ID=cds-WP_198597661.1;Parent=gene-CYJ00_RS00120;Dbxref=GenBank:WP_198597661.1;Name=WP_198597661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CYJ00_RS00120;partial=true;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_198597661.1;start_range=.,1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	428	688	.	-	.	ID=gene-CYJ00_RS00125;Name=CYJ00_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00125;old_locus_tag=CYJ00_000125
NZ_PJUS02000005.1	Protein Homology	CDS	428	688	.	-	0	ID=cds-WP_230493161.1;Parent=gene-CYJ00_RS00125;Dbxref=GenBank:WP_230493161.1;Name=WP_230493161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219918.1;locus_tag=CYJ00_RS00125;product=hypothetical protein;protein_id=WP_230493161.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	685	1056	.	-	.	ID=gene-CYJ00_RS00130;Name=CYJ00_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00130;old_locus_tag=CYJ00_000130
NZ_PJUS02000005.1	Protein Homology	CDS	685	1056	.	-	0	ID=cds-WP_096536634.1;Parent=gene-CYJ00_RS00130;Dbxref=GenBank:WP_096536634.1;Name=WP_096536634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614707.1;locus_tag=CYJ00_RS00130;product=hypothetical protein;protein_id=WP_096536634.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	1025	2170	.	-	.	ID=gene-CYJ00_RS00135;Name=CYJ00_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00135;old_locus_tag=CYJ00_000135
NZ_PJUS02000005.1	Protein Homology	CDS	1025	2170	.	-	0	ID=cds-WP_014614708.1;Parent=gene-CYJ00_RS00135;Dbxref=GenBank:WP_014614708.1;Name=WP_014614708.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614708.1;locus_tag=CYJ00_RS00135;product=thiolase family protein;protein_id=WP_014614708.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	2167	3516	.	-	.	ID=gene-CYJ00_RS00140;Name=CYJ00_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00140;old_locus_tag=CYJ00_000140
NZ_PJUS02000005.1	Protein Homology	CDS	2167	3516	.	-	0	ID=cds-WP_101457671.1;Parent=gene-CYJ00_RS00140;Dbxref=GenBank:WP_101457671.1;Name=WP_101457671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728644.1;locus_tag=CYJ00_RS00140;product=AMP-binding protein;protein_id=WP_101457671.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	3727	4413	.	-	.	ID=gene-CYJ00_RS00145;Name=CYJ00_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00145;old_locus_tag=CYJ00_000145
NZ_PJUS02000005.1	Protein Homology	CDS	3727	4413	.	-	0	ID=cds-WP_015728643.1;Parent=gene-CYJ00_RS00145;Dbxref=GenBank:WP_015728643.1;Name=WP_015728643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=CYJ00_RS00145;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_015728643.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	4630	5487	.	-	.	ID=gene-CYJ00_RS00150;Name=CYJ00_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00150;old_locus_tag=CYJ00_000150
NZ_PJUS02000005.1	Protein Homology	CDS	4630	5487	.	-	0	ID=cds-WP_015728640.1;Parent=gene-CYJ00_RS00150;Dbxref=GenBank:WP_015728640.1;Name=WP_015728640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ00_RS00150;product=oxidoreductase;protein_id=WP_015728640.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	5980	6663	.	-	.	ID=gene-CYJ00_RS00155;Name=CYJ00_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00155;old_locus_tag=CYJ00_000155
NZ_PJUS02000005.1	Protein Homology	CDS	5980	6663	.	-	0	ID=cds-WP_014614720.1;Parent=gene-CYJ00_RS00155;Dbxref=GenBank:WP_014614720.1;Name=WP_014614720.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219923.1;locus_tag=CYJ00_RS00155;product=flavin reductase family protein;protein_id=WP_014614720.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	6961	7509	.	-	.	ID=gene-CYJ00_RS00160;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00160;old_locus_tag=CYJ00_000160
NZ_PJUS02000005.1	Protein Homology	CDS	6961	7509	.	-	0	ID=cds-WP_101457672.1;Parent=gene-CYJ00_RS00160;Dbxref=GenBank:WP_101457672.1;Name=WP_101457672.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169036.1;locus_tag=CYJ00_RS00160;product=6-phospho-3-hexuloisomerase;protein_id=WP_101457672.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	7511	8149	.	-	.	ID=gene-CYJ00_RS00165;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00165;old_locus_tag=CYJ00_000165
NZ_PJUS02000005.1	Protein Homology	CDS	7511	8149	.	-	0	ID=cds-WP_014614722.1;Parent=gene-CYJ00_RS00165;Dbxref=GenBank:WP_014614722.1;Name=WP_014614722.1;Ontology_term=GO:0005975,GO:0019647,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation via ribulose monophosphate cycle|0019647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CYJ00_RS00165;product=3-hexulose-6-phosphate synthase;protein_id=WP_014614722.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	8248	8982	.	-	.	ID=gene-CYJ00_RS00170;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00170;old_locus_tag=CYJ00_000170
NZ_PJUS02000005.1	Protein Homology	CDS	8248	8982	.	-	0	ID=cds-WP_014614723.1;Parent=gene-CYJ00_RS00170;Dbxref=GenBank:WP_014614723.1;Name=WP_014614723.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614723.1;locus_tag=CYJ00_RS00170;product=glucosamine-6-phosphate deaminase;protein_id=WP_014614723.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	8988	9662	.	-	.	ID=gene-CYJ00_RS00175;Name=CYJ00_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00175;old_locus_tag=CYJ00_000175
NZ_PJUS02000005.1	Protein Homology	CDS	8988	9662	.	-	0	ID=cds-WP_014614724.1;Parent=gene-CYJ00_RS00175;Dbxref=GenBank:WP_014614724.1;Name=WP_014614724.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728633.1;locus_tag=CYJ00_RS00175;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_014614724.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	9663	11201	.	-	.	ID=gene-CYJ00_RS00180;Name=CYJ00_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00180;old_locus_tag=CYJ00_000180
NZ_PJUS02000005.1	Protein Homology	CDS	9663	11201	.	-	0	ID=cds-WP_014614725.1;Parent=gene-CYJ00_RS00180;Dbxref=GenBank:WP_014614725.1;Name=WP_014614725.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166666.1;locus_tag=CYJ00_RS00180;product=PTS transporter subunit EIIC;protein_id=WP_014614725.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	11321	12160	.	+	.	ID=gene-CYJ00_RS00185;Name=CYJ00_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00185;old_locus_tag=CYJ00_000185
NZ_PJUS02000005.1	Protein Homology	CDS	11321	12160	.	+	0	ID=cds-WP_063278639.1;Parent=gene-CYJ00_RS00185;Dbxref=GenBank:WP_063278639.1;Name=WP_063278639.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728631.1;locus_tag=CYJ00_RS00185;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063278639.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	12246	12605	.	+	.	ID=gene-CYJ00_RS00190;Name=CYJ00_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00190;old_locus_tag=CYJ00_000190
NZ_PJUS02000005.1	Protein Homology	CDS	12246	12605	.	+	0	ID=cds-WP_014614727.1;Parent=gene-CYJ00_RS00190;Dbxref=GenBank:WP_014614727.1;Name=WP_014614727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166668.1;locus_tag=CYJ00_RS00190;product=YojF family protein;protein_id=WP_014614727.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	12624	13301	.	+	.	ID=gene-CYJ00_RS00195;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CYJ00_RS00195;old_locus_tag=CYJ00_000195
NZ_PJUS02000005.1	Protein Homology	CDS	12624	13301	.	+	0	ID=cds-WP_041613367.1;Parent=gene-CYJ00_RS00195;Dbxref=GenBank:WP_041613367.1;Name=WP_041613367.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169043.1;locus_tag=CYJ00_RS00195;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_041613367.1;transl_table=11
NZ_PJUS02000005.1	RefSeq	gene	13347	14225	.	+	.	ID=gene-CYJ00_RS00200;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=CYJ00_RS00200;old_locus_tag=CYJ00_000200
NZ_PJUS02000005.1	Protein Homology	CDS	13347	14225	.	+	0	ID=cds-WP_014614729.1;Parent=gene-CYJ00_RS00200;Dbxref=GenBank:WP_014614729.1;Name=WP_014614729.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CYJ00_RS00200;product=GTP cyclohydrolase FolE2;protein_id=WP_014614729.1;transl_table=11
##sequence-region NZ_PJUS02000094.1 1 5458
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000094.1	RefSeq	region	1	5458	.	+	.	ID=NZ_PJUS02000094.1:1..5458;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000094.1	RefSeq	gene	1	307	.	+	.	ID=gene-CYJ00_RS02470;Name=CYJ00_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02470;old_locus_tag=CYJ00_002470;partial=true;start_range=.,1
NZ_PJUS02000094.1	Protein Homology	CDS	1	307	.	+	1	ID=cds-WP_198597670.1;Parent=gene-CYJ00_RS02470;Dbxref=GenBank:WP_198597670.1;Name=WP_198597670.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165352.1;locus_tag=CYJ00_RS02470;partial=true;product=dihydrodipicolinate synthase family protein;protein_id=WP_198597670.1;start_range=.,1;transl_table=11
NZ_PJUS02000094.1	RefSeq	gene	304	1026	.	+	.	ID=gene-CYJ00_RS02475;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02475;old_locus_tag=CYJ00_002475
NZ_PJUS02000094.1	Protein Homology	CDS	304	1026	.	+	0	ID=cds-WP_014613952.1;Parent=gene-CYJ00_RS02475;Dbxref=GenBank:WP_014613952.1;Name=WP_014613952.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275807.1;locus_tag=CYJ00_RS02475;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_014613952.1;transl_table=11
NZ_PJUS02000094.1	RefSeq	gene	1046	1765	.	+	.	ID=gene-CYJ00_RS02480;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CYJ00_RS02480;old_locus_tag=CYJ00_002480
NZ_PJUS02000094.1	Protein Homology	CDS	1046	1765	.	+	0	ID=cds-WP_014613951.1;Parent=gene-CYJ00_RS02480;Dbxref=GenBank:WP_014613951.1;Name=WP_014613951.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613951.1;locus_tag=CYJ00_RS02480;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_014613951.1;transl_table=11
NZ_PJUS02000094.1	RefSeq	gene	1951	3105	.	+	.	ID=gene-CYJ00_RS02485;Name=CYJ00_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02485;old_locus_tag=CYJ00_002485
NZ_PJUS02000094.1	Protein Homology	CDS	1951	3105	.	+	0	ID=cds-WP_014613950.1;Parent=gene-CYJ00_RS02485;Dbxref=GenBank:WP_014613950.1;Name=WP_014613950.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613950.1;locus_tag=CYJ00_RS02485;product=M20 metallopeptidase family protein;protein_id=WP_014613950.1;transl_table=11
NZ_PJUS02000094.1	RefSeq	gene	3102	4178	.	+	.	ID=gene-CYJ00_RS02490;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ00_RS02490;old_locus_tag=CYJ00_002490
NZ_PJUS02000094.1	Protein Homology	CDS	3102	4178	.	+	0	ID=cds-WP_096535672.1;Parent=gene-CYJ00_RS02490;Dbxref=GenBank:WP_096535672.1;Name=WP_096535672.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729107.1;locus_tag=CYJ00_RS02490;product=alanine racemase;protein_id=WP_096535672.1;transl_table=11
NZ_PJUS02000094.1	RefSeq	gene	4179	5444	.	+	.	ID=gene-CYJ00_RS02495;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02495;old_locus_tag=CYJ00_002495
NZ_PJUS02000094.1	Protein Homology	CDS	4179	5444	.	+	0	ID=cds-WP_101457901.1;Parent=gene-CYJ00_RS02495;Dbxref=GenBank:WP_101457901.1;Name=WP_101457901.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=CYJ00_RS02495;product=diaminopimelate decarboxylase;protein_id=WP_101457901.1;transl_table=11
##sequence-region NZ_PJUS02000338.1 1 5115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000338.1	RefSeq	region	1	5115	.	+	.	ID=NZ_PJUS02000338.1:1..5115;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000338.1	RefSeq	gene	1	492	.	+	.	ID=gene-CYJ00_RS10345;Name=CYJ00_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10345;old_locus_tag=CYJ00_010355;partial=true;start_range=.,1
NZ_PJUS02000338.1	Protein Homology	CDS	1	492	.	+	0	ID=cds-WP_101457902.1;Parent=gene-CYJ00_RS10345;Dbxref=GenBank:WP_101457902.1;Name=WP_101457902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729438.1;locus_tag=CYJ00_RS10345;partial=true;product=F0F1 ATP synthase subunit delta;protein_id=WP_101457902.1;start_range=.,1;transl_table=11
NZ_PJUS02000338.1	RefSeq	gene	519	2030	.	+	.	ID=gene-CYJ00_RS10350;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10350;old_locus_tag=CYJ00_010360
NZ_PJUS02000338.1	Protein Homology	CDS	519	2030	.	+	0	ID=cds-WP_101457903.1;Parent=gene-CYJ00_RS10350;Dbxref=GenBank:WP_101457903.1;Name=WP_101457903.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=CYJ00_RS10350;product=F0F1 ATP synthase subunit alpha;protein_id=WP_101457903.1;transl_table=11
NZ_PJUS02000338.1	RefSeq	gene	2068	2934	.	+	.	ID=gene-CYJ00_RS10355;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CYJ00_RS10355;old_locus_tag=CYJ00_010365
NZ_PJUS02000338.1	Protein Homology	CDS	2068	2934	.	+	0	ID=cds-WP_026067008.1;Parent=gene-CYJ00_RS10355;Dbxref=GenBank:WP_026067008.1;Name=WP_026067008.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302681.1;locus_tag=CYJ00_RS10355;product=ATP synthase F1 subunit gamma;protein_id=WP_026067008.1;transl_table=11
NZ_PJUS02000338.1	RefSeq	gene	2959	4371	.	+	.	ID=gene-CYJ00_RS10360;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CYJ00_RS10360;old_locus_tag=CYJ00_010370
NZ_PJUS02000338.1	Protein Homology	CDS	2959	4371	.	+	0	ID=cds-WP_014613348.1;Parent=gene-CYJ00_RS10360;Dbxref=GenBank:WP_014613348.1;Name=WP_014613348.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CYJ00_RS10360;product=F0F1 ATP synthase subunit beta;protein_id=WP_014613348.1;transl_table=11
NZ_PJUS02000338.1	RefSeq	gene	4394	4798	.	+	.	ID=gene-CYJ00_RS10365;Name=CYJ00_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10365;old_locus_tag=CYJ00_010375
NZ_PJUS02000338.1	Protein Homology	CDS	4394	4798	.	+	0	ID=cds-WP_014613349.1;Parent=gene-CYJ00_RS10365;Dbxref=GenBank:WP_014613349.1;Name=WP_014613349.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094394.1;locus_tag=CYJ00_RS10365;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_014613349.1;transl_table=11
##sequence-region NZ_PJUS02000093.1 1 5566
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000093.1	RefSeq	region	1	5566	.	+	.	ID=NZ_PJUS02000093.1:1..5566;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000093.1	RefSeq	gene	230	1486	.	-	.	ID=gene-CYJ00_RS02445;Name=CYJ00_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02445;old_locus_tag=CYJ00_002445
NZ_PJUS02000093.1	Protein Homology	CDS	230	1486	.	-	0	ID=cds-WP_063278942.1;Parent=gene-CYJ00_RS02445;Dbxref=GenBank:WP_063278942.1;Name=WP_063278942.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613612.1;locus_tag=CYJ00_RS02445;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063278942.1;transl_table=11
NZ_PJUS02000093.1	RefSeq	gene	1603	3237	.	+	.	ID=gene-CYJ00_RS02450;Name=CYJ00_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02450;old_locus_tag=CYJ00_002450
NZ_PJUS02000093.1	Protein Homology	CDS	1603	3237	.	+	0	ID=cds-WP_101457904.1;Parent=gene-CYJ00_RS02450;Dbxref=GenBank:WP_101457904.1;Name=WP_101457904.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168401.1;locus_tag=CYJ00_RS02450;product=putative polysaccharide biosynthesis protein;protein_id=WP_101457904.1;transl_table=11
NZ_PJUS02000093.1	RefSeq	gene	3237	3935	.	+	.	ID=gene-CYJ00_RS02455;Name=CYJ00_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02455;old_locus_tag=CYJ00_002455
NZ_PJUS02000093.1	Protein Homology	CDS	3237	3935	.	+	0	ID=cds-WP_101457905.1;Parent=gene-CYJ00_RS02455;Dbxref=GenBank:WP_101457905.1;Name=WP_101457905.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165027.1;locus_tag=CYJ00_RS02455;product=pseudouridine synthase;protein_id=WP_101457905.1;transl_table=11
NZ_PJUS02000093.1	RefSeq	gene	4019	4417	.	+	.	ID=gene-CYJ00_RS02460;Name=CYJ00_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02460;old_locus_tag=CYJ00_002460
NZ_PJUS02000093.1	Protein Homology	CDS	4019	4417	.	+	0	ID=cds-WP_101457906.1;Parent=gene-CYJ00_RS02460;Dbxref=GenBank:WP_101457906.1;Name=WP_101457906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168403.1;locus_tag=CYJ00_RS02460;product=YtxH domain-containing protein;protein_id=WP_101457906.1;transl_table=11
NZ_PJUS02000093.1	RefSeq	gene	4740	5566	.	+	.	ID=gene-CYJ00_RS02465;Name=CYJ00_RS02465;end_range=5566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02465;old_locus_tag=CYJ00_002465;partial=true
NZ_PJUS02000093.1	Protein Homology	CDS	4740	5566	.	+	0	ID=cds-WP_133158319.1;Parent=gene-CYJ00_RS02465;Dbxref=GenBank:WP_133158319.1;Name=WP_133158319.1;Ontology_term=GO:0008270,GO:0016805;end_range=5566,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000265409.1;locus_tag=CYJ00_RS02465;partial=true;product=Sapep family Mn(2+)-dependent dipeptidase;protein_id=WP_133158319.1;transl_table=11
##sequence-region NZ_PJUS02000199.1 1 5994
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000199.1	RefSeq	region	1	5994	.	+	.	ID=NZ_PJUS02000199.1:1..5994;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000199.1	RefSeq	pseudogene	1	89	.	-	.	ID=gene-CYJ00_RS13850;Name=CYJ00_RS13850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13850;old_locus_tag=CYJ00_005445;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000199.1	Protein Homology	CDS	1	89	.	-	0	ID=cds-CYJ00_RS13850;Parent=gene-CYJ00_RS13850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=CYJ00_RS13850;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	86	892	.	-	.	ID=gene-CYJ00_RS05445;Name=CYJ00_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05445;old_locus_tag=CYJ00_005450
NZ_PJUS02000199.1	Protein Homology	CDS	86	892	.	-	0	ID=cds-WP_014614242.1;Parent=gene-CYJ00_RS05445;Dbxref=GenBank:WP_014614242.1;Name=WP_014614242.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=CYJ00_RS05445;product=ABC transporter permease;protein_id=WP_014614242.1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	879	1979	.	-	.	ID=gene-CYJ00_RS05450;Name=CYJ00_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05450;old_locus_tag=CYJ00_005455
NZ_PJUS02000199.1	Protein Homology	CDS	879	1979	.	-	0	ID=cds-WP_014614243.1;Parent=gene-CYJ00_RS05450;Dbxref=GenBank:WP_014614243.1;Name=WP_014614243.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=CYJ00_RS05450;product=ABC transporter ATP-binding protein;protein_id=WP_014614243.1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	1994	2533	.	-	.	ID=gene-CYJ00_RS05455;Name=CYJ00_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05455;old_locus_tag=CYJ00_005460
NZ_PJUS02000199.1	Protein Homology	CDS	1994	2533	.	-	0	ID=cds-WP_015728957.1;Parent=gene-CYJ00_RS05455;Dbxref=GenBank:WP_015728957.1;Name=WP_015728957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=CYJ00_RS05455;product=helix-turn-helix domain-containing protein;protein_id=WP_015728957.1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	2636	2908	.	-	.	ID=gene-CYJ00_RS05460;Name=CYJ00_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05460;old_locus_tag=CYJ00_005465
NZ_PJUS02000199.1	Protein Homology	CDS	2636	2908	.	-	0	ID=cds-WP_096536141.1;Parent=gene-CYJ00_RS05460;Dbxref=GenBank:WP_096536141.1;Name=WP_096536141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=CYJ00_RS05460;product=UPF0223 family protein;protein_id=WP_096536141.1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	3718	5124	.	-	.	ID=gene-CYJ00_RS05465;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05465;old_locus_tag=CYJ00_005470
NZ_PJUS02000199.1	Protein Homology	CDS	3718	5124	.	-	0	ID=cds-WP_014614246.1;Parent=gene-CYJ00_RS05465;Dbxref=GenBank:WP_014614246.1;Name=WP_014614246.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CYJ00_RS05465;product=dihydrolipoyl dehydrogenase;protein_id=WP_014614246.1;transl_table=11
NZ_PJUS02000199.1	RefSeq	gene	5128	5994	.	-	.	ID=gene-CYJ00_RS05470;Name=CYJ00_RS05470;end_range=5994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05470;old_locus_tag=CYJ00_005475;partial=true
NZ_PJUS02000199.1	Protein Homology	CDS	5128	5994	.	-	0	ID=cds-WP_101457907.1;Parent=gene-CYJ00_RS05470;Dbxref=GenBank:WP_101457907.1;Name=WP_101457907.1;Ontology_term=GO:0016407,GO:0045240;end_range=5994,.;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CYJ00_RS05470;partial=true;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_101457907.1;transl_table=11
##sequence-region NZ_PJUS02000322.1 1 4619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000322.1	RefSeq	region	1	4619	.	+	.	ID=NZ_PJUS02000322.1:1..4619;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000322.1	RefSeq	pseudogene	1	267	.	+	.	ID=gene-CYJ00_RS13495;Name=CYJ00_RS13495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13495;old_locus_tag=CYJ00_008605;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000322.1	Protein Homology	CDS	1	267	.	+	0	ID=cds-CYJ00_RS13495;Parent=gene-CYJ00_RS13495;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614948.1;locus_tag=CYJ00_RS13495;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	331	918	.	-	.	ID=gene-CYJ00_RS08605;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=CYJ00_RS08605;old_locus_tag=CYJ00_008610
NZ_PJUS02000322.1	Protein Homology	CDS	331	918	.	-	0	ID=cds-WP_014614947.1;Parent=gene-CYJ00_RS08605;Dbxref=GenBank:WP_014614947.1;Name=WP_014614947.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=CYJ00_RS08605;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_014614947.1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	940	1557	.	-	.	ID=gene-CYJ00_RS08610;Name=CYJ00_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08610;old_locus_tag=CYJ00_008615
NZ_PJUS02000322.1	Protein Homology	CDS	940	1557	.	-	0	ID=cds-WP_014614946.1;Parent=gene-CYJ00_RS08610;Dbxref=GenBank:WP_014614946.1;Name=WP_014614946.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=CYJ00_RS08610;product=flavin reductase family protein;protein_id=WP_014614946.1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	1603	2565	.	-	.	ID=gene-CYJ00_RS08615;Name=CYJ00_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08615;old_locus_tag=CYJ00_008620
NZ_PJUS02000322.1	Protein Homology	CDS	1603	2565	.	-	0	ID=cds-WP_101457908.1;Parent=gene-CYJ00_RS08615;Dbxref=GenBank:WP_101457908.1;Name=WP_101457908.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614945.1;locus_tag=CYJ00_RS08615;product=ring-cleaving dioxygenase;protein_id=WP_101457908.1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	2648	3073	.	-	.	ID=gene-CYJ00_RS08620;Name=CYJ00_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08620;old_locus_tag=CYJ00_008625
NZ_PJUS02000322.1	Protein Homology	CDS	2648	3073	.	-	0	ID=cds-WP_014614944.1;Parent=gene-CYJ00_RS08620;Dbxref=GenBank:WP_014614944.1;Name=WP_014614944.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614944.1;locus_tag=CYJ00_RS08620;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014614944.1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	3240	3515	.	+	.	ID=gene-CYJ00_RS08625;Name=CYJ00_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08625;old_locus_tag=CYJ00_008630
NZ_PJUS02000322.1	Protein Homology	CDS	3240	3515	.	+	0	ID=cds-WP_014614943.1;Parent=gene-CYJ00_RS08625;Dbxref=GenBank:WP_014614943.1;Name=WP_014614943.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168313.1;locus_tag=CYJ00_RS08625;product=GNAT family N-acetyltransferase;protein_id=WP_014614943.1;transl_table=11
NZ_PJUS02000322.1	RefSeq	gene	3593	4510	.	-	.	ID=gene-CYJ00_RS08630;Name=CYJ00_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08630;old_locus_tag=CYJ00_008635
NZ_PJUS02000322.1	Protein Homology	CDS	3593	4510	.	-	0	ID=cds-WP_101457909.1;Parent=gene-CYJ00_RS08630;Dbxref=GenBank:WP_101457909.1;Name=WP_101457909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614942.1;locus_tag=CYJ00_RS08630;product=DUF5996 family protein;protein_id=WP_101457909.1;transl_table=11
##sequence-region NZ_PJUS02000422.1 1 4650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000422.1	RefSeq	region	1	4650	.	+	.	ID=NZ_PJUS02000422.1:1..4650;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000422.1	RefSeq	gene	322	1269	.	+	.	ID=gene-CYJ00_RS12475;Name=CYJ00_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12475;old_locus_tag=CYJ00_012480
NZ_PJUS02000422.1	Protein Homology	CDS	322	1269	.	+	0	ID=cds-WP_014613408.1;Parent=gene-CYJ00_RS12475;Dbxref=GenBank:WP_014613408.1;Name=WP_014613408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613408.1;locus_tag=CYJ00_RS12475;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014613408.1;transl_table=11
NZ_PJUS02000422.1	RefSeq	gene	1325	2809	.	+	.	ID=gene-CYJ00_RS12480;Name=CYJ00_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12480;old_locus_tag=CYJ00_012485
NZ_PJUS02000422.1	Protein Homology	CDS	1325	2809	.	+	0	ID=cds-WP_101457910.1;Parent=gene-CYJ00_RS12480;Dbxref=GenBank:WP_101457910.1;Name=WP_101457910.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613409.1;locus_tag=CYJ00_RS12480;product=sucrose-6-phosphate hydrolase;protein_id=WP_101457910.1;transl_table=11
NZ_PJUS02000422.1	RefSeq	gene	2813	3757	.	+	.	ID=gene-CYJ00_RS12485;Name=CYJ00_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12485;old_locus_tag=CYJ00_012490
NZ_PJUS02000422.1	Protein Homology	CDS	2813	3757	.	+	0	ID=cds-WP_037542584.1;Parent=gene-CYJ00_RS12485;Dbxref=GenBank:WP_037542584.1;Name=WP_037542584.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166402.1;locus_tag=CYJ00_RS12485;product=carbohydrate kinase family protein;protein_id=WP_037542584.1;transl_table=11
NZ_PJUS02000422.1	RefSeq	gene	3817	4533	.	-	.	ID=gene-CYJ00_RS12490;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12490;old_locus_tag=CYJ00_012495
NZ_PJUS02000422.1	Protein Homology	CDS	3817	4533	.	-	0	ID=cds-WP_014613411.1;Parent=gene-CYJ00_RS12490;Dbxref=GenBank:WP_014613411.1;Name=WP_014613411.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CYJ00_RS12490;product=quorum-sensing response regulator AgrA;protein_id=WP_014613411.1;transl_table=11
##sequence-region NZ_PJUS02000068.1 1 4714
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000068.1	RefSeq	region	1	4714	.	+	.	ID=NZ_PJUS02000068.1:1..4714;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000068.1	RefSeq	gene	169	948	.	+	.	ID=gene-CYJ00_RS01810;Name=CYJ00_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01810;old_locus_tag=CYJ00_001810
NZ_PJUS02000068.1	Protein Homology	CDS	169	948	.	+	0	ID=cds-WP_101457911.1;Parent=gene-CYJ00_RS01810;Dbxref=GenBank:WP_101457911.1;Name=WP_101457911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729543.1;locus_tag=CYJ00_RS01810;product=N-acetylglucosaminidase;protein_id=WP_101457911.1;transl_table=11
NZ_PJUS02000068.1	RefSeq	gene	968	2095	.	+	.	ID=gene-CYJ00_RS01815;Name=CYJ00_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01815;old_locus_tag=CYJ00_001815
NZ_PJUS02000068.1	Protein Homology	CDS	968	2095	.	+	0	ID=cds-WP_096533480.1;Parent=gene-CYJ00_RS01815;Dbxref=GenBank:WP_096533480.1;Name=WP_096533480.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=CYJ00_RS01815;product=FAD-dependent monooxygenase;protein_id=WP_096533480.1;transl_table=11
NZ_PJUS02000068.1	RefSeq	gene	2291	3253	.	-	.	ID=gene-CYJ00_RS01820;Name=CYJ00_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01820;old_locus_tag=CYJ00_001820
NZ_PJUS02000068.1	Protein Homology	CDS	2291	3253	.	-	0	ID=cds-WP_014613159.1;Parent=gene-CYJ00_RS01820;Dbxref=GenBank:WP_014613159.1;Name=WP_014613159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613159.1;locus_tag=CYJ00_RS01820;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_014613159.1;transl_table=11
NZ_PJUS02000068.1	RefSeq	gene	3317	3631	.	-	.	ID=gene-CYJ00_RS01825;Name=CYJ00_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01825;old_locus_tag=CYJ00_001825
NZ_PJUS02000068.1	Protein Homology	CDS	3317	3631	.	-	0	ID=cds-WP_037542387.1;Parent=gene-CYJ00_RS01825;Dbxref=GenBank:WP_037542387.1;Name=WP_037542387.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219772.1;locus_tag=CYJ00_RS01825;product=DMT family transporter;protein_id=WP_037542387.1;transl_table=11
NZ_PJUS02000068.1	RefSeq	gene	3628	3954	.	-	.	ID=gene-CYJ00_RS01830;Name=CYJ00_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01830;old_locus_tag=CYJ00_001830
NZ_PJUS02000068.1	Protein Homology	CDS	3628	3954	.	-	0	ID=cds-WP_014613161.1;Parent=gene-CYJ00_RS01830;Dbxref=GenBank:WP_014613161.1;Name=WP_014613161.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613161.1;locus_tag=CYJ00_RS01830;product=DMT family transporter;protein_id=WP_014613161.1;transl_table=11
NZ_PJUS02000068.1	RefSeq	gene	4265	4714	.	-	.	ID=gene-CYJ00_RS01835;Name=CYJ00_RS01835;end_range=4714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01835;old_locus_tag=CYJ00_001835;partial=true
NZ_PJUS02000068.1	Protein Homology	CDS	4265	4714	.	-	0	ID=cds-WP_101457912.1;Parent=gene-CYJ00_RS01835;Dbxref=GenBank:WP_101457912.1;Name=WP_101457912.1;Ontology_term=GO:0004040,GO:0042834;end_range=4714,.;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496352.1;locus_tag=CYJ00_RS01835;partial=true;product=CHAP domain-containing protein;protein_id=WP_101457912.1;transl_table=11
##sequence-region NZ_PJUS02000193.1 1 6756
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000193.1	RefSeq	region	1	6756	.	+	.	ID=NZ_PJUS02000193.1:1..6756;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000193.1	RefSeq	gene	181	408	.	-	.	ID=gene-CYJ00_RS05265;Name=CYJ00_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05265;old_locus_tag=CYJ00_005270
NZ_PJUS02000193.1	Protein Homology	CDS	181	408	.	-	0	ID=cds-WP_014613986.1;Parent=gene-CYJ00_RS05265;Dbxref=GenBank:WP_014613986.1;Name=WP_014613986.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=CYJ00_RS05265;product=YneF family protein;protein_id=WP_014613986.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	566	2551	.	-	.	ID=gene-CYJ00_RS05270;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CYJ00_RS05270;old_locus_tag=CYJ00_005275
NZ_PJUS02000193.1	Protein Homology	CDS	566	2551	.	-	0	ID=cds-WP_014613987.1;Parent=gene-CYJ00_RS05270;Dbxref=GenBank:WP_014613987.1;Name=WP_014613987.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613987.1;locus_tag=CYJ00_RS05270;product=transketolase;protein_id=WP_014613987.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	2656	2892	.	-	.	ID=gene-CYJ00_RS05275;Name=CYJ00_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05275;old_locus_tag=CYJ00_005280
NZ_PJUS02000193.1	Protein Homology	CDS	2656	2892	.	-	0	ID=cds-WP_014613988.1;Parent=gene-CYJ00_RS05275;Dbxref=GenBank:WP_014613988.1;Name=WP_014613988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613988.1;locus_tag=CYJ00_RS05275;product=DUF896 domain-containing protein;protein_id=WP_014613988.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	3159	3392	.	-	.	ID=gene-CYJ00_RS05280;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05280;old_locus_tag=CYJ00_005285
NZ_PJUS02000193.1	Protein Homology	CDS	3159	3392	.	-	0	ID=cds-WP_014613989.1;Parent=gene-CYJ00_RS05280;Dbxref=GenBank:WP_014613989.1;Name=WP_014613989.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=CYJ00_RS05280;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_014613989.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	3537	4160	.	+	.	ID=gene-CYJ00_RS05285;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05285;old_locus_tag=CYJ00_005290
NZ_PJUS02000193.1	Protein Homology	CDS	3537	4160	.	+	0	ID=cds-WP_014613990.1;Parent=gene-CYJ00_RS05285;Dbxref=GenBank:WP_014613990.1;Name=WP_014613990.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CYJ00_RS05285;product=transcriptional repressor LexA;protein_id=WP_014613990.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	4373	5389	.	-	.	ID=gene-CYJ00_RS05290;Name=CYJ00_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05290;old_locus_tag=CYJ00_005295
NZ_PJUS02000193.1	Protein Homology	CDS	4373	5389	.	-	0	ID=cds-WP_172425822.1;Parent=gene-CYJ00_RS05290;Dbxref=GenBank:WP_172425822.1;Name=WP_172425822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275860.1;locus_tag=CYJ00_RS05290;product=CAP domain-containing protein;protein_id=WP_172425822.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	5395	6372	.	-	.	ID=gene-CYJ00_RS05295;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CYJ00_RS05295;old_locus_tag=CYJ00_005300
NZ_PJUS02000193.1	Protein Homology	CDS	5395	6372	.	-	0	ID=cds-WP_014613992.1;Parent=gene-CYJ00_RS05295;Dbxref=GenBank:WP_014613992.1;Name=WP_014613992.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=CYJ00_RS05295;product=GMP reductase;protein_id=WP_014613992.1;transl_table=11
NZ_PJUS02000193.1	RefSeq	gene	6453	6722	.	-	.	ID=gene-CYJ00_RS05300;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CYJ00_RS05300;old_locus_tag=CYJ00_005305
NZ_PJUS02000193.1	Protein Homology	CDS	6453	6722	.	-	0	ID=cds-WP_014613993.1;Parent=gene-CYJ00_RS05300;Dbxref=GenBank:WP_014613993.1;Name=WP_014613993.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CYJ00_RS05300;product=30S ribosomal protein S14;protein_id=WP_014613993.1;transl_table=11
##sequence-region NZ_PJUS02000363.1 1 4799
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000363.1	RefSeq	region	1	4799	.	+	.	ID=NZ_PJUS02000363.1:1..4799;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000363.1	RefSeq	gene	1	174	.	-	.	ID=gene-CYJ00_RS10955;Name=CYJ00_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10955;old_locus_tag=CYJ00_010960;partial=true;start_range=.,1
NZ_PJUS02000363.1	Protein Homology	CDS	1	174	.	-	0	ID=cds-WP_101457913.1;Parent=gene-CYJ00_RS10955;Dbxref=GenBank:WP_101457913.1;Name=WP_101457913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499332.1;locus_tag=CYJ00_RS10955;partial=true;product=DUF2198 family protein;protein_id=WP_101457913.1;start_range=.,1;transl_table=11
NZ_PJUS02000363.1	RefSeq	gene	180	821	.	-	.	ID=gene-CYJ00_RS10960;Name=CYJ00_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10960;old_locus_tag=CYJ00_010965
NZ_PJUS02000363.1	Protein Homology	CDS	180	821	.	-	0	ID=cds-WP_014614503.1;Parent=gene-CYJ00_RS10960;Dbxref=GenBank:WP_014614503.1;Name=WP_014614503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=CYJ00_RS10960;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_014614503.1;transl_table=11
NZ_PJUS02000363.1	RefSeq	gene	1029	2133	.	-	.	ID=gene-CYJ00_RS10965;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10965;old_locus_tag=CYJ00_010970
NZ_PJUS02000363.1	Protein Homology	CDS	2062	2133	.	-	0	ID=cds-WP_096533149.1;Parent=gene-CYJ00_RS10965;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ00_RS10965;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11
NZ_PJUS02000363.1	Protein Homology	CDS	1029	2060	.	-	0	ID=cds-WP_096533149.1;Parent=gene-CYJ00_RS10965;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ00_RS10965;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11
NZ_PJUS02000363.1	RefSeq	gene	2173	4701	.	-	.	ID=gene-CYJ00_RS10970;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10970;old_locus_tag=CYJ00_010975
NZ_PJUS02000363.1	Protein Homology	CDS	2173	4701	.	-	0	ID=cds-WP_014614505.1;Parent=gene-CYJ00_RS10970;Dbxref=GenBank:WP_014614505.1;Name=WP_014614505.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168505.1;locus_tag=CYJ00_RS10970;product=preprotein translocase subunit SecA;protein_id=WP_014614505.1;transl_table=11
##sequence-region NZ_PJUS02000003.1 1 5155
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000003.1	RefSeq	region	1	5155	.	+	.	ID=NZ_PJUS02000003.1:1..5155;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000003.1	cmsearch	riboswitch	37	171	.	+	.	ID=id-NZ_PJUS02000003.1:37..171;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000003.1	RefSeq	gene	317	1363	.	+	.	ID=gene-CYJ00_RS00090;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00090;old_locus_tag=CYJ00_000090
NZ_PJUS02000003.1	Protein Homology	CDS	317	1363	.	+	0	ID=cds-WP_014613597.1;Parent=gene-CYJ00_RS00090;Dbxref=GenBank:WP_014613597.1;Name=WP_014613597.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=CYJ00_RS00090;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_014613597.1;transl_table=11
NZ_PJUS02000003.1	RefSeq	gene	1368	1997	.	+	.	ID=gene-CYJ00_RS00095;Name=CYJ00_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00095;old_locus_tag=CYJ00_000095
NZ_PJUS02000003.1	Protein Homology	CDS	1368	1997	.	+	0	ID=cds-WP_014613598.1;Parent=gene-CYJ00_RS00095;Dbxref=GenBank:WP_014613598.1;Name=WP_014613598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=CYJ00_RS00095;product=riboflavin synthase;protein_id=WP_014613598.1;transl_table=11
NZ_PJUS02000003.1	RefSeq	gene	2011	3192	.	+	.	ID=gene-CYJ00_RS00100;Name=CYJ00_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00100;old_locus_tag=CYJ00_000100
NZ_PJUS02000003.1	Protein Homology	CDS	2011	3192	.	+	0	ID=cds-WP_014613599.1;Parent=gene-CYJ00_RS00100;Dbxref=GenBank:WP_014613599.1;Name=WP_014613599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=CYJ00_RS00100;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_014613599.1;transl_table=11
NZ_PJUS02000003.1	RefSeq	gene	3210	3674	.	+	.	ID=gene-CYJ00_RS00105;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CYJ00_RS00105;old_locus_tag=CYJ00_000105
NZ_PJUS02000003.1	Protein Homology	CDS	3210	3674	.	+	0	ID=cds-WP_031253731.1;Parent=gene-CYJ00_RS00105;Dbxref=GenBank:WP_031253731.1;Name=WP_031253731.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500388.1;locus_tag=CYJ00_RS00105;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_031253731.1;transl_table=11
NZ_PJUS02000003.1	RefSeq	gene	3799	4785	.	-	.	ID=gene-CYJ00_RS00110;Name=CYJ00_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00110;old_locus_tag=CYJ00_000110
NZ_PJUS02000003.1	Protein Homology	CDS	3799	4785	.	-	0	ID=cds-WP_014613601.1;Parent=gene-CYJ00_RS00110;Dbxref=GenBank:WP_014613601.1;Name=WP_014613601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613601.1;locus_tag=CYJ00_RS00110;product=proline dehydrogenase family protein;protein_id=WP_014613601.1;transl_table=11
##sequence-region NZ_PJUS02000256.1 1 13146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000256.1	RefSeq	region	1	13146	.	+	.	ID=NZ_PJUS02000256.1:1..13146;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000256.1	RefSeq	gene	1	3080	.	+	.	ID=gene-CYJ00_RS06990;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06990;old_locus_tag=CYJ00_006995;partial=true;start_range=.,1
NZ_PJUS02000256.1	Protein Homology	CDS	1	3080	.	+	2	ID=cds-WP_101457673.1;Parent=gene-CYJ00_RS06990;Dbxref=GenBank:WP_101457673.1;Name=WP_101457673.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=CYJ00_RS06990;partial=true;product=glutamate synthase large subunit;protein_id=WP_101457673.1;start_range=.,1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	3093	4550	.	+	.	ID=gene-CYJ00_RS06995;Name=CYJ00_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06995;old_locus_tag=CYJ00_007000
NZ_PJUS02000256.1	Protein Homology	CDS	3093	4550	.	+	0	ID=cds-WP_101457674.1;Parent=gene-CYJ00_RS06995;Dbxref=GenBank:WP_101457674.1;Name=WP_101457674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503578.1;locus_tag=CYJ00_RS06995;product=glutamate synthase subunit beta;protein_id=WP_101457674.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	4617	4709	.	+	.	ID=gene-CYJ00_RS07000;Name=CYJ00_RS07000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS07000;old_locus_tag=CYJ00_007005
NZ_PJUS02000256.1	tRNAscan-SE	tRNA	4617	4709	.	+	.	ID=rna-CYJ00_RS07000;Parent=gene-CYJ00_RS07000;anticodon=(pos:4653..4655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07000;product=tRNA-Ser
NZ_PJUS02000256.1	tRNAscan-SE	exon	4617	4709	.	+	.	ID=exon-CYJ00_RS07000-1;Parent=rna-CYJ00_RS07000;anticodon=(pos:4653..4655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07000;product=tRNA-Ser
NZ_PJUS02000256.1	RefSeq	gene	5029	6465	.	+	.	ID=gene-CYJ00_RS07010;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=CYJ00_RS07010;old_locus_tag=CYJ00_007015
NZ_PJUS02000256.1	Protein Homology	CDS	5029	6465	.	+	0	ID=cds-WP_014614832.1;Parent=gene-CYJ00_RS07010;Dbxref=GenBank:WP_014614832.1;Name=WP_014614832.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614832.1;locus_tag=CYJ00_RS07010;product=PTS system trehalose-specific EIIBC component;protein_id=WP_014614832.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	6510	8141	.	+	.	ID=gene-CYJ00_RS07015;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CYJ00_RS07015;old_locus_tag=CYJ00_007020
NZ_PJUS02000256.1	Protein Homology	CDS	6510	8141	.	+	0	ID=cds-WP_063284945.1;Parent=gene-CYJ00_RS07015;Dbxref=GenBank:WP_063284945.1;Name=WP_063284945.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220085.1;locus_tag=CYJ00_RS07015;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_063284945.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	8163	8897	.	+	.	ID=gene-CYJ00_RS07020;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CYJ00_RS07020;old_locus_tag=CYJ00_007025
NZ_PJUS02000256.1	Protein Homology	CDS	8163	8897	.	+	0	ID=cds-WP_063284944.1;Parent=gene-CYJ00_RS07020;Dbxref=GenBank:WP_063284944.1;Name=WP_063284944.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166102.1;locus_tag=CYJ00_RS07020;product=trehalose operon repressor;protein_id=WP_063284944.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	8983	9252	.	+	.	ID=gene-CYJ00_RS07025;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CYJ00_RS07025;old_locus_tag=CYJ00_007030
NZ_PJUS02000256.1	cmsearch	SRP_RNA	8983	9252	.	+	.	ID=rna-CYJ00_RS07025;Parent=gene-CYJ00_RS07025;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS07025;product=signal recognition particle sRNA large type
NZ_PJUS02000256.1	cmsearch	exon	8983	9252	.	+	.	ID=exon-CYJ00_RS07025-1;Parent=rna-CYJ00_RS07025;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS07025;product=signal recognition particle sRNA large type
NZ_PJUS02000256.1	RefSeq	gene	9354	9887	.	+	.	ID=gene-CYJ00_RS07030;Name=CYJ00_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07030;old_locus_tag=CYJ00_007035
NZ_PJUS02000256.1	Protein Homology	CDS	9354	9887	.	+	0	ID=cds-WP_014614829.1;Parent=gene-CYJ00_RS07030;Dbxref=GenBank:WP_014614829.1;Name=WP_014614829.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=CYJ00_RS07030;product=GNAT family N-acetyltransferase;protein_id=WP_014614829.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	9954	11657	.	+	.	ID=gene-CYJ00_RS07035;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CYJ00_RS07035;old_locus_tag=CYJ00_007040
NZ_PJUS02000256.1	Protein Homology	CDS	9954	11657	.	+	0	ID=cds-WP_014614828.1;Parent=gene-CYJ00_RS07035;Dbxref=GenBank:WP_014614828.1;Name=WP_014614828.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=CYJ00_RS07035;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014614828.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	11749	12069	.	+	.	ID=gene-CYJ00_RS07040;Name=CYJ00_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07040;old_locus_tag=CYJ00_007045
NZ_PJUS02000256.1	Protein Homology	CDS	11749	12069	.	+	0	ID=cds-WP_014614827.1;Parent=gene-CYJ00_RS07040;Dbxref=GenBank:WP_014614827.1;Name=WP_014614827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=CYJ00_RS07040;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_014614827.1;transl_table=11
NZ_PJUS02000256.1	RefSeq	gene	12071	12667	.	+	.	ID=gene-CYJ00_RS07045;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CYJ00_RS07045;old_locus_tag=CYJ00_007050
NZ_PJUS02000256.1	Protein Homology	CDS	12071	12667	.	+	0	ID=cds-WP_014614826.1;Parent=gene-CYJ00_RS07045;Dbxref=GenBank:WP_014614826.1;Name=WP_014614826.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CYJ00_RS07045;product=recombination mediator RecR;protein_id=WP_014614826.1;transl_table=11
##sequence-region NZ_PJUS02000301.1 1 4508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000301.1	RefSeq	region	1	4508	.	+	.	ID=NZ_PJUS02000301.1:1..4508;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000301.1	RefSeq	gene	107	973	.	-	.	ID=gene-CYJ00_RS08055;Name=CYJ00_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08055;old_locus_tag=CYJ00_008060
NZ_PJUS02000301.1	Protein Homology	CDS	107	973	.	-	0	ID=cds-WP_020219930.1;Parent=gene-CYJ00_RS08055;Dbxref=GenBank:WP_020219930.1;Name=WP_020219930.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728626.1;locus_tag=CYJ00_RS08055;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_020219930.1;transl_table=11
NZ_PJUS02000301.1	RefSeq	gene	1135	1608	.	-	.	ID=gene-CYJ00_RS08060;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08060;old_locus_tag=CYJ00_008065
NZ_PJUS02000301.1	Protein Homology	CDS	1135	1608	.	-	0	ID=cds-WP_014614733.1;Parent=gene-CYJ00_RS08060;Dbxref=GenBank:WP_014614733.1;Name=WP_014614733.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614733.1;locus_tag=CYJ00_RS08060;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014614733.1;transl_table=11
NZ_PJUS02000301.1	RefSeq	gene	1679	2302	.	+	.	ID=gene-CYJ00_RS08065;Name=CYJ00_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08065;old_locus_tag=CYJ00_008070
NZ_PJUS02000301.1	Protein Homology	CDS	1679	2302	.	+	0	ID=cds-WP_014614734.1;Parent=gene-CYJ00_RS08065;Dbxref=GenBank:WP_014614734.1;Name=WP_014614734.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614734.1;locus_tag=CYJ00_RS08065;product=deoxynucleoside kinase;protein_id=WP_014614734.1;transl_table=11
NZ_PJUS02000301.1	RefSeq	gene	2289	2954	.	+	.	ID=gene-CYJ00_RS08070;Name=CYJ00_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08070;old_locus_tag=CYJ00_008075
NZ_PJUS02000301.1	Protein Homology	CDS	2289	2954	.	+	0	ID=cds-WP_101457914.1;Parent=gene-CYJ00_RS08070;Dbxref=GenBank:WP_101457914.1;Name=WP_101457914.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728623.1;locus_tag=CYJ00_RS08070;product=deoxynucleoside kinase;protein_id=WP_101457914.1;transl_table=11
NZ_PJUS02000301.1	RefSeq	gene	3507	4205	.	-	.	ID=gene-CYJ00_RS08075;Name=CYJ00_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08075;old_locus_tag=CYJ00_008080
NZ_PJUS02000301.1	Protein Homology	CDS	3507	4205	.	-	0	ID=cds-WP_014614736.1;Parent=gene-CYJ00_RS08075;Dbxref=GenBank:WP_014614736.1;Name=WP_014614736.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614736.1;locus_tag=CYJ00_RS08075;product=HAD family hydrolase;protein_id=WP_014614736.1;transl_table=11
##sequence-region NZ_PJUS02000185.1 1 6381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000185.1	RefSeq	region	1	6381	.	+	.	ID=NZ_PJUS02000185.1:1..6381;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000185.1	RefSeq	gene	1	668	.	+	.	ID=gene-CYJ00_RS05035;Name=CYJ00_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05035;old_locus_tag=CYJ00_005040;partial=true;start_range=.,1
NZ_PJUS02000185.1	Protein Homology	CDS	1	668	.	+	2	ID=cds-WP_101457915.1;Parent=gene-CYJ00_RS05035;Dbxref=GenBank:WP_101457915.1;Name=WP_101457915.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613956.1;locus_tag=CYJ00_RS05035;partial=true;product=S1 RNA-binding domain-containing protein;protein_id=WP_101457915.1;start_range=.,1;transl_table=11
NZ_PJUS02000185.1	RefSeq	gene	935	3883	.	+	.	ID=gene-CYJ00_RS05040;Name=spsD;gbkey=Gene;gene=spsD;gene_biotype=protein_coding;locus_tag=CYJ00_RS05040;old_locus_tag=CYJ00_005045
NZ_PJUS02000185.1	Protein Homology	CDS	935	3883	.	+	0	ID=cds-WP_101457916.1;Parent=gene-CYJ00_RS05040;Dbxref=GenBank:WP_101457916.1;Name=WP_101457916.1;gbkey=CDS;gene=spsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ00_RS05040;product=MSCRAMM family adhesin SpsD;protein_id=WP_101457916.1;transl_table=11
NZ_PJUS02000185.1	RefSeq	gene	3944	5743	.	-	.	ID=gene-CYJ00_RS05045;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ00_RS05045;old_locus_tag=CYJ00_005050
NZ_PJUS02000185.1	Protein Homology	CDS	3944	5743	.	-	0	ID=cds-WP_101457917.1;Parent=gene-CYJ00_RS05045;Dbxref=GenBank:WP_101457917.1;Name=WP_101457917.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613958.1;locus_tag=CYJ00_RS05045;product=oligoendopeptidase F;protein_id=WP_101457917.1;transl_table=11
NZ_PJUS02000185.1	RefSeq	gene	5875	6198	.	+	.	ID=gene-CYJ00_RS05050;Name=CYJ00_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05050;old_locus_tag=CYJ00_005055
NZ_PJUS02000185.1	Protein Homology	CDS	5875	6198	.	+	0	ID=cds-WP_014613959.1;Parent=gene-CYJ00_RS05050;Dbxref=GenBank:WP_014613959.1;Name=WP_014613959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613959.1;locus_tag=CYJ00_RS05050;product=hypothetical protein;protein_id=WP_014613959.1;transl_table=11
##sequence-region NZ_PJUS02000064.1 1 3040
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000064.1	RefSeq	region	1	3040	.	+	.	ID=NZ_PJUS02000064.1:1..3040;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000064.1	RefSeq	gene	26	202	.	+	.	ID=gene-CYJ00_RS13085;Name=CYJ00_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13085
NZ_PJUS02000064.1	GeneMarkS-2+	CDS	26	202	.	+	0	ID=cds-WP_154800926.1;Parent=gene-CYJ00_RS13085;Dbxref=GenBank:WP_154800926.1;Name=WP_154800926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13085;product=hypothetical protein;protein_id=WP_154800926.1;transl_table=11
NZ_PJUS02000064.1	RefSeq	gene	195	1814	.	-	.	ID=gene-CYJ00_RS01740;Name=CYJ00_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01740;old_locus_tag=CYJ00_001740
NZ_PJUS02000064.1	Protein Homology	CDS	195	1814	.	-	0	ID=cds-WP_065354690.1;Parent=gene-CYJ00_RS01740;Dbxref=GenBank:WP_065354690.1;Name=WP_065354690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830362.1;locus_tag=CYJ00_RS01740;product=poly(glycerol-phosphate) alpha-glucosyltransferase;protein_id=WP_065354690.1;transl_table=11
NZ_PJUS02000064.1	RefSeq	pseudogene	1892	1975	.	-	.	ID=gene-CYJ00_RS13880;Name=CYJ00_RS13880;end_range=1975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13880;partial=true;pseudo=true
NZ_PJUS02000064.1	Protein Homology	CDS	1892	1975	.	-	0	ID=cds-CYJ00_RS13880;Parent=gene-CYJ00_RS13880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009986;end_range=1975,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=CYJ00_RS13880;partial=true;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000064.1	RefSeq	gene	1993	3040	.	-	.	ID=gene-CYJ00_RS01745;Name=CYJ00_RS01745;end_range=3040,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01745;old_locus_tag=CYJ00_001745;partial=true
NZ_PJUS02000064.1	GeneMarkS-2+	CDS	1993	3040	.	-	1	ID=cds-WP_241956928.1;Parent=gene-CYJ00_RS01745;Dbxref=GenBank:WP_241956928.1;Name=WP_241956928.1;end_range=3040,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS01745;partial=true;product=hypothetical protein;protein_id=WP_241956928.1;transl_table=11
##sequence-region NZ_PJUS02000367.1 1 4717
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000367.1	RefSeq	region	1	4717	.	+	.	ID=NZ_PJUS02000367.1:1..4717;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000367.1	RefSeq	gene	241	2412	.	-	.	ID=gene-CYJ00_RS11080;Name=CYJ00_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11080;old_locus_tag=CYJ00_011085
NZ_PJUS02000367.1	Protein Homology	CDS	241	2412	.	-	0	ID=cds-WP_172968902.1;Parent=gene-CYJ00_RS11080;Dbxref=GenBank:WP_172968902.1;Name=WP_172968902.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ00_RS11080;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_172968902.1;transl_table=11
NZ_PJUS02000367.1	RefSeq	gene	2602	4717	.	-	.	ID=gene-CYJ00_RS11085;Name=CYJ00_RS11085;end_range=4717,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11085;old_locus_tag=CYJ00_011090;partial=true
NZ_PJUS02000367.1	Protein Homology	CDS	2602	4717	.	-	1	ID=cds-WP_101457918.1;Parent=gene-CYJ00_RS11085;Dbxref=GenBank:WP_101457918.1;Name=WP_101457918.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;end_range=4717,.;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ00_RS11085;partial=true;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_101457918.1;transl_table=11
##sequence-region NZ_PJUS02000170.1 1 3996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000170.1	RefSeq	region	1	3996	.	+	.	ID=NZ_PJUS02000170.1:1..3996;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000170.1	RefSeq	gene	1	197	.	+	.	ID=gene-CYJ00_RS04795;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04795;old_locus_tag=CYJ00_004800;partial=true;start_range=.,1
NZ_PJUS02000170.1	Protein Homology	CDS	1	197	.	+	2	ID=cds-WP_101457919.1;Parent=gene-CYJ00_RS04795;Dbxref=GenBank:WP_101457919.1;Name=WP_101457919.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499780.1;locus_tag=CYJ00_RS04795;partial=true;product=30S ribosome-binding factor RbfA;protein_id=WP_101457919.1;start_range=.,1;transl_table=11
NZ_PJUS02000170.1	RefSeq	gene	282	1199	.	+	.	ID=gene-CYJ00_RS04800;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04800;old_locus_tag=CYJ00_004805
NZ_PJUS02000170.1	Protein Homology	CDS	282	1199	.	+	0	ID=cds-WP_014614064.1;Parent=gene-CYJ00_RS04800;Dbxref=GenBank:WP_014614064.1;Name=WP_014614064.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=CYJ00_RS04800;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014614064.1;transl_table=11
NZ_PJUS02000170.1	RefSeq	gene	1214	2185	.	+	.	ID=gene-CYJ00_RS04805;Name=CYJ00_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04805;old_locus_tag=CYJ00_004810
NZ_PJUS02000170.1	Protein Homology	CDS	1214	2185	.	+	0	ID=cds-WP_014614063.1;Parent=gene-CYJ00_RS04805;Dbxref=GenBank:WP_014614063.1;Name=WP_014614063.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476021.1;locus_tag=CYJ00_RS04805;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_014614063.1;transl_table=11
NZ_PJUS02000170.1	RefSeq	gene	2286	2555	.	+	.	ID=gene-CYJ00_RS04810;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CYJ00_RS04810;old_locus_tag=CYJ00_004815
NZ_PJUS02000170.1	Protein Homology	CDS	2286	2555	.	+	0	ID=cds-WP_014614062.1;Parent=gene-CYJ00_RS04810;Dbxref=GenBank:WP_014614062.1;Name=WP_014614062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CYJ00_RS04810;product=30S ribosomal protein S15;protein_id=WP_014614062.1;transl_table=11
NZ_PJUS02000170.1	RefSeq	gene	2714	3996	.	+	.	ID=gene-CYJ00_RS04815;Name=pnp;end_range=3996,.;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CYJ00_RS04815;old_locus_tag=CYJ00_004820;partial=true
NZ_PJUS02000170.1	Protein Homology	CDS	2714	3996	.	+	0	ID=cds-WP_101457920.1;Parent=gene-CYJ00_RS04815;Dbxref=GenBank:WP_101457920.1;Name=WP_101457920.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;end_range=3996,.;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614061.1;locus_tag=CYJ00_RS04815;partial=true;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_101457920.1;transl_table=11
##sequence-region NZ_PJUS02000063.1 1 5123
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000063.1	RefSeq	region	1	5123	.	+	.	ID=NZ_PJUS02000063.1:1..5123;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000063.1	RefSeq	gene	257	394	.	+	.	ID=gene-CYJ00_RS01705;Name=CYJ00_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01705;old_locus_tag=CYJ00_001705
NZ_PJUS02000063.1	Protein Homology	CDS	257	394	.	+	0	ID=cds-WP_014614102.1;Parent=gene-CYJ00_RS01705;Dbxref=GenBank:WP_014614102.1;Name=WP_014614102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614102.1;locus_tag=CYJ00_RS01705;product=beta-class phenol-soluble modulin;protein_id=WP_014614102.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	662	1012	.	-	.	ID=gene-CYJ00_RS01710;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CYJ00_RS01710;old_locus_tag=CYJ00_001710
NZ_PJUS02000063.1	Protein Homology	CDS	662	1012	.	-	0	ID=cds-WP_014614103.1;Parent=gene-CYJ00_RS01710;Dbxref=GenBank:WP_014614103.1;Name=WP_014614103.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=CYJ00_RS01710;product=50S ribosomal protein L19;protein_id=WP_014614103.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	1120	1851	.	-	.	ID=gene-CYJ00_RS01715;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CYJ00_RS01715;old_locus_tag=CYJ00_001715
NZ_PJUS02000063.1	Protein Homology	CDS	1120	1851	.	-	0	ID=cds-WP_014614104.1;Parent=gene-CYJ00_RS01715;Dbxref=GenBank:WP_014614104.1;Name=WP_014614104.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165492.1;locus_tag=CYJ00_RS01715;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_014614104.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	1848	2351	.	-	.	ID=gene-CYJ00_RS01720;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CYJ00_RS01720;old_locus_tag=CYJ00_001720
NZ_PJUS02000063.1	Protein Homology	CDS	1848	2351	.	-	0	ID=cds-WP_014614105.1;Parent=gene-CYJ00_RS01720;Dbxref=GenBank:WP_014614105.1;Name=WP_014614105.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=CYJ00_RS01720;product=ribosome maturation factor RimM;protein_id=WP_014614105.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	2674	2949	.	-	.	ID=gene-CYJ00_RS01725;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CYJ00_RS01725;old_locus_tag=CYJ00_001725
NZ_PJUS02000063.1	Protein Homology	CDS	2674	2949	.	-	0	ID=cds-WP_014614106.1;Parent=gene-CYJ00_RS01725;Dbxref=GenBank:WP_014614106.1;Name=WP_014614106.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=CYJ00_RS01725;product=30S ribosomal protein S16;protein_id=WP_014614106.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	3417	4088	.	-	.	ID=gene-CYJ00_RS01730;Name=CYJ00_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01730;old_locus_tag=CYJ00_001730
NZ_PJUS02000063.1	Protein Homology	CDS	3417	4088	.	-	0	ID=cds-WP_037543191.1;Parent=gene-CYJ00_RS01730;Dbxref=GenBank:WP_037543191.1;Name=WP_037543191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165892.1;locus_tag=CYJ00_RS01730;product=hypothetical protein;protein_id=WP_037543191.1;transl_table=11
NZ_PJUS02000063.1	RefSeq	gene	4190	5123	.	-	.	ID=gene-CYJ00_RS01735;Name=CYJ00_RS01735;end_range=5123,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01735;old_locus_tag=CYJ00_001735;partial=true
NZ_PJUS02000063.1	Protein Homology	CDS	4190	5123	.	-	1	ID=cds-WP_101457921.1;Parent=gene-CYJ00_RS01735;Dbxref=GenBank:WP_101457921.1;Name=WP_101457921.1;Ontology_term=GO:0006304,GO:0003677;end_range=5123,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449171.1;locus_tag=CYJ00_RS01735;partial=true;product=restriction endonuclease subunit S;protein_id=WP_101457921.1;transl_table=11
##sequence-region NZ_PJUS02000392.1 1 4639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000392.1	RefSeq	region	1	4639	.	+	.	ID=NZ_PJUS02000392.1:1..4639;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000392.1	RefSeq	gene	92	862	.	+	.	ID=gene-CYJ00_RS11545;Name=CYJ00_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11545;old_locus_tag=CYJ00_011550
NZ_PJUS02000392.1	Protein Homology	CDS	92	862	.	+	0	ID=cds-WP_100006727.1;Parent=gene-CYJ00_RS11545;Dbxref=GenBank:WP_100006727.1;Name=WP_100006727.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=CYJ00_RS11545;product=YlmH family RNA-binding protein;protein_id=WP_100006727.1;transl_table=11
NZ_PJUS02000392.1	RefSeq	gene	886	1485	.	+	.	ID=gene-CYJ00_RS11550;Name=CYJ00_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11550;old_locus_tag=CYJ00_011555
NZ_PJUS02000392.1	Protein Homology	CDS	886	1485	.	+	0	ID=cds-WP_063278831.1;Parent=gene-CYJ00_RS11550;Dbxref=GenBank:WP_063278831.1;Name=WP_063278831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166536.1;locus_tag=CYJ00_RS11550;product=DivIVA domain-containing protein;protein_id=WP_063278831.1;transl_table=11
NZ_PJUS02000392.1	RefSeq	gene	1686	4433	.	+	.	ID=gene-CYJ00_RS11555;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CYJ00_RS11555;old_locus_tag=CYJ00_011560
NZ_PJUS02000392.1	Protein Homology	CDS	1686	4433	.	+	0	ID=cds-WP_014614162.1;Parent=gene-CYJ00_RS11555;Dbxref=GenBank:WP_014614162.1;Name=WP_014614162.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=CYJ00_RS11555;product=isoleucine--tRNA ligase;protein_id=WP_014614162.1;transl_table=11
##sequence-region NZ_PJUS02000238.1 1 3542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000238.1	RefSeq	region	1	3542	.	+	.	ID=NZ_PJUS02000238.1:1..3542;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000238.1	RefSeq	gene	1	370	.	+	.	ID=gene-CYJ00_RS06475;Name=CYJ00_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06475;old_locus_tag=CYJ00_006480;partial=true;start_range=.,1
NZ_PJUS02000238.1	Protein Homology	CDS	1	370	.	+	1	ID=cds-WP_133158335.1;Parent=gene-CYJ00_RS06475;Dbxref=GenBank:WP_133158335.1;Name=WP_133158335.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614512.1;locus_tag=CYJ00_RS06475;partial=true;product=GGDEF domain-containing protein;protein_id=WP_133158335.1;start_range=.,1;transl_table=11
NZ_PJUS02000238.1	RefSeq	gene	864	1625	.	+	.	ID=gene-CYJ00_RS06480;Name=CYJ00_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06480;old_locus_tag=CYJ00_006485
NZ_PJUS02000238.1	Protein Homology	CDS	864	1625	.	+	0	ID=cds-WP_014614513.1;Parent=gene-CYJ00_RS06480;Dbxref=GenBank:WP_014614513.1;Name=WP_014614513.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=CYJ00_RS06480;product=threonine/serine exporter family protein;protein_id=WP_014614513.1;transl_table=11
NZ_PJUS02000238.1	RefSeq	gene	1641	2144	.	+	.	ID=gene-CYJ00_RS06485;Name=CYJ00_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06485;old_locus_tag=CYJ00_006490
NZ_PJUS02000238.1	Protein Homology	CDS	1641	2144	.	+	0	ID=cds-WP_014614514.1;Parent=gene-CYJ00_RS06485;Dbxref=GenBank:WP_014614514.1;Name=WP_014614514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=CYJ00_RS06485;product=threonine/serine exporter family protein;protein_id=WP_014614514.1;transl_table=11
NZ_PJUS02000238.1	RefSeq	gene	2168	3391	.	+	.	ID=gene-CYJ00_RS06490;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CYJ00_RS06490;old_locus_tag=CYJ00_006495
NZ_PJUS02000238.1	Protein Homology	CDS	2168	3391	.	+	0	ID=cds-WP_015728755.1;Parent=gene-CYJ00_RS06490;Dbxref=GenBank:WP_015728755.1;Name=WP_015728755.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166127.1;locus_tag=CYJ00_RS06490;product=peptidase T;protein_id=WP_015728755.1;transl_table=11
##sequence-region NZ_PJUS02000213.1 1 4367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000213.1	RefSeq	region	1	4367	.	+	.	ID=NZ_PJUS02000213.1:1..4367;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000213.1	RefSeq	gene	20	4186	.	-	.	ID=gene-CYJ00_RS05900;Name=CYJ00_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05900;old_locus_tag=CYJ00_005905
NZ_PJUS02000213.1	Protein Homology	CDS	20	4186	.	-	0	ID=cds-WP_096536171.1;Parent=gene-CYJ00_RS05900;Dbxref=GenBank:WP_096536171.1;Name=WP_096536171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614312.1;locus_tag=CYJ00_RS05900;product=GW dipeptide domain-containing protein;protein_id=WP_096536171.1;transl_table=11
##sequence-region NZ_PJUS02000287.1 1 5161
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000287.1	RefSeq	region	1	5161	.	+	.	ID=NZ_PJUS02000287.1:1..5161;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000287.1	RefSeq	gene	1	1256	.	-	.	ID=gene-CYJ00_RS07655;Name=CYJ00_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07655;old_locus_tag=CYJ00_007660;partial=true;start_range=.,1
NZ_PJUS02000287.1	Protein Homology	CDS	1	1256	.	-	0	ID=cds-WP_101457922.1;Parent=gene-CYJ00_RS07655;Dbxref=GenBank:WP_101457922.1;Name=WP_101457922.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900268.1;locus_tag=CYJ00_RS07655;partial=true;product=aminoacyltransferase;protein_id=WP_101457922.1;start_range=.,1;transl_table=11
NZ_PJUS02000287.1	RefSeq	gene	1431	2465	.	-	.	ID=gene-CYJ00_RS07660;Name=CYJ00_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07660;old_locus_tag=CYJ00_007665
NZ_PJUS02000287.1	Protein Homology	CDS	1431	2465	.	-	0	ID=cds-WP_020219594.1;Parent=gene-CYJ00_RS07660;Dbxref=GenBank:WP_020219594.1;Name=WP_020219594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219594.1;locus_tag=CYJ00_RS07660;product=M42 family metallopeptidase;protein_id=WP_020219594.1;transl_table=11
NZ_PJUS02000287.1	RefSeq	gene	2608	3699	.	+	.	ID=gene-CYJ00_RS07665;Name=CYJ00_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07665;old_locus_tag=CYJ00_007670
NZ_PJUS02000287.1	Protein Homology	CDS	2608	3699	.	+	0	ID=cds-WP_014613963.1;Parent=gene-CYJ00_RS07665;Dbxref=GenBank:WP_014613963.1;Name=WP_014613963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=CYJ00_RS07665;product=prephenate dehydrogenase;protein_id=WP_014613963.1;transl_table=11
NZ_PJUS02000287.1	RefSeq	gene	3775	5037	.	-	.	ID=gene-CYJ00_RS07670;Name=CYJ00_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07670;old_locus_tag=CYJ00_007675
NZ_PJUS02000287.1	Protein Homology	CDS	3775	5037	.	-	0	ID=cds-WP_014613964.1;Parent=gene-CYJ00_RS07670;Dbxref=GenBank:WP_014613964.1;Name=WP_014613964.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=CYJ00_RS07670;product=Y-family DNA polymerase;protein_id=WP_014613964.1;transl_table=11
##sequence-region NZ_PJUS02000056.1 1 21551
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000056.1	RefSeq	region	1	21551	.	+	.	ID=NZ_PJUS02000056.1:1..21551;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000056.1	RefSeq	gene	21	887	.	-	.	ID=gene-CYJ00_RS01550;Name=CYJ00_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01550;old_locus_tag=CYJ00_001550
NZ_PJUS02000056.1	Protein Homology	CDS	21	887	.	-	0	ID=cds-WP_014614040.1;Parent=gene-CYJ00_RS01550;Dbxref=GenBank:WP_014614040.1;Name=WP_014614040.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=CYJ00_RS01550;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_014614040.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	888	2648	.	-	.	ID=gene-CYJ00_RS01555;Name=CYJ00_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01555;old_locus_tag=CYJ00_001555
NZ_PJUS02000056.1	Protein Homology	CDS	888	2648	.	-	0	ID=cds-WP_014614041.1;Parent=gene-CYJ00_RS01555;Dbxref=GenBank:WP_014614041.1;Name=WP_014614041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=CYJ00_RS01555;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_014614041.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	2801	3595	.	-	.	ID=gene-CYJ00_RS01560;Name=CYJ00_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01560;old_locus_tag=CYJ00_001560
NZ_PJUS02000056.1	Protein Homology	CDS	2801	3595	.	-	0	ID=cds-WP_101457676.1;Parent=gene-CYJ00_RS01560;Dbxref=GenBank:WP_101457676.1;Name=WP_101457676.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167795.1;locus_tag=CYJ00_RS01560;product=TIGR00282 family metallophosphoesterase;protein_id=WP_101457676.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	3926	6100	.	-	.	ID=gene-CYJ00_RS01565;Name=CYJ00_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01565;old_locus_tag=CYJ00_001565
NZ_PJUS02000056.1	Protein Homology	CDS	3926	6100	.	-	0	ID=cds-WP_101457677.1;Parent=gene-CYJ00_RS01565;Dbxref=GenBank:WP_101457677.1;Name=WP_101457677.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=CYJ00_RS01565;product=heavy metal translocating P-type ATPase;protein_id=WP_101457677.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	6084	6464	.	-	.	ID=gene-CYJ00_RS01570;Name=CYJ00_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01570;old_locus_tag=CYJ00_001570
NZ_PJUS02000056.1	Protein Homology	CDS	6084	6464	.	-	0	ID=cds-WP_014614045.1;Parent=gene-CYJ00_RS01570;Dbxref=GenBank:WP_014614045.1;Name=WP_014614045.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=CYJ00_RS01570;product=ArsR/SmtB family transcription factor;protein_id=WP_014614045.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	6662	6880	.	+	.	ID=gene-CYJ00_RS01575;Name=CYJ00_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01575;old_locus_tag=CYJ00_001575
NZ_PJUS02000056.1	Protein Homology	CDS	6662	6880	.	+	0	ID=cds-WP_014614046.1;Parent=gene-CYJ00_RS01575;Dbxref=GenBank:WP_014614046.1;Name=WP_014614046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165444.1;locus_tag=CYJ00_RS01575;product=hypothetical protein;protein_id=WP_014614046.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	7003	8562	.	-	.	ID=gene-CYJ00_RS01580;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CYJ00_RS01580;old_locus_tag=CYJ00_001580
NZ_PJUS02000056.1	Protein Homology	CDS	7003	8562	.	-	0	ID=cds-WP_014614047.1;Parent=gene-CYJ00_RS01580;Dbxref=GenBank:WP_014614047.1;Name=WP_014614047.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CYJ00_RS01580;product=ribonuclease Y;protein_id=WP_014614047.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	8789	9832	.	-	.	ID=gene-CYJ00_RS01585;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01585;old_locus_tag=CYJ00_001585
NZ_PJUS02000056.1	Protein Homology	CDS	8789	9832	.	-	0	ID=cds-WP_014614049.1;Parent=gene-CYJ00_RS01585;Dbxref=GenBank:WP_014614049.1;Name=WP_014614049.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=CYJ00_RS01585;product=recombinase RecA;protein_id=WP_014614049.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	9971	11146	.	-	.	ID=gene-CYJ00_RS01590;Name=CYJ00_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01590;old_locus_tag=CYJ00_001590
NZ_PJUS02000056.1	Protein Homology	CDS	9971	11146	.	-	0	ID=cds-WP_014614050.1;Parent=gene-CYJ00_RS01590;Dbxref=GenBank:WP_014614050.1;Name=WP_014614050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165447.1;locus_tag=CYJ00_RS01590;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_014614050.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	11367	11951	.	-	.	ID=gene-CYJ00_RS01595;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01595;old_locus_tag=CYJ00_001595
NZ_PJUS02000056.1	Protein Homology	CDS	11367	11951	.	-	0	ID=cds-WP_014614051.1;Parent=gene-CYJ00_RS01595;Dbxref=GenBank:WP_014614051.1;Name=WP_014614051.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=CYJ00_RS01595;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_014614051.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	11993	12388	.	-	.	ID=gene-CYJ00_RS01600;Name=CYJ00_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01600;old_locus_tag=CYJ00_001600
NZ_PJUS02000056.1	Protein Homology	CDS	11993	12388	.	-	0	ID=cds-WP_014614052.1;Parent=gene-CYJ00_RS01600;Dbxref=GenBank:WP_014614052.1;Name=WP_014614052.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167802.1;locus_tag=CYJ00_RS01600;product=helix-turn-helix domain-containing protein;protein_id=WP_014614052.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	12407	13252	.	-	.	ID=gene-CYJ00_RS01605;Name=CYJ00_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01605;old_locus_tag=CYJ00_001605
NZ_PJUS02000056.1	Protein Homology	CDS	12407	13252	.	-	0	ID=cds-WP_014614053.1;Parent=gene-CYJ00_RS01605;Dbxref=GenBank:WP_014614053.1;Name=WP_014614053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165450.1;locus_tag=CYJ00_RS01605;product=DUF3388 domain-containing protein;protein_id=WP_014614053.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	13309	14013	.	-	.	ID=gene-CYJ00_RS01610;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=CYJ00_RS01610;old_locus_tag=CYJ00_001610
NZ_PJUS02000056.1	Protein Homology	CDS	13309	14013	.	-	0	ID=cds-WP_101457678.1;Parent=gene-CYJ00_RS01610;Dbxref=GenBank:WP_101457678.1;Name=WP_101457678.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165451.1;locus_tag=CYJ00_RS01610;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_101457678.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	14010	15299	.	-	.	ID=gene-CYJ00_RS01615;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=CYJ00_RS01615;old_locus_tag=CYJ00_001615
NZ_PJUS02000056.1	Protein Homology	CDS	14010	15299	.	-	0	ID=cds-WP_101457679.1;Parent=gene-CYJ00_RS01615;Dbxref=GenBank:WP_101457679.1;Name=WP_101457679.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614055.1;locus_tag=CYJ00_RS01615;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_101457679.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	15292	16566	.	-	.	ID=gene-CYJ00_RS01620;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=CYJ00_RS01620;old_locus_tag=CYJ00_001620
NZ_PJUS02000056.1	Protein Homology	CDS	15292	16566	.	-	0	ID=cds-WP_096533536.1;Parent=gene-CYJ00_RS01620;Dbxref=GenBank:WP_096533536.1;Name=WP_096533536.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=CYJ00_RS01620;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_096533536.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	16600	17316	.	-	.	ID=gene-CYJ00_RS01625;Name=CYJ00_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01625;old_locus_tag=CYJ00_001625
NZ_PJUS02000056.1	Protein Homology	CDS	16600	17316	.	-	0	ID=cds-WP_014614057.1;Parent=gene-CYJ00_RS01625;Dbxref=GenBank:WP_014614057.1;Name=WP_014614057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=CYJ00_RS01625;product=GntR family transcriptional regulator;protein_id=WP_014614057.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	17322	19685	.	-	.	ID=gene-CYJ00_RS01630;Name=CYJ00_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01630;old_locus_tag=CYJ00_001630
NZ_PJUS02000056.1	Protein Homology	CDS	17322	19685	.	-	0	ID=cds-WP_070407556.1;Parent=gene-CYJ00_RS01630;Dbxref=GenBank:WP_070407556.1;Name=WP_070407556.1;Ontology_term=GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729054.1;locus_tag=CYJ00_RS01630;product=DNA translocase FtsK;protein_id=WP_070407556.1;transl_table=11
NZ_PJUS02000056.1	RefSeq	gene	19824	21497	.	-	.	ID=gene-CYJ00_RS01635;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01635;old_locus_tag=CYJ00_001635
NZ_PJUS02000056.1	Protein Homology	CDS	19824	21497	.	-	0	ID=cds-WP_014614059.1;Parent=gene-CYJ00_RS01635;Dbxref=GenBank:WP_014614059.1;Name=WP_014614059.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CYJ00_RS01635;product=ribonuclease J2;protein_id=WP_014614059.1;transl_table=11
##sequence-region NZ_PJUS02000377.1 1 3823
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000377.1	RefSeq	region	1	3823	.	+	.	ID=NZ_PJUS02000377.1:1..3823;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000377.1	RefSeq	pseudogene	1	182	.	+	.	ID=gene-CYJ00_RS11260;Name=CYJ00_RS11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11260;old_locus_tag=CYJ00_011265;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000377.1	Protein Homology	CDS	1	182	.	+	2	ID=cds-CYJ00_RS11260;Parent=gene-CYJ00_RS11260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728962.1;locus_tag=CYJ00_RS11260;partial=true;product=heme A synthase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000377.1	RefSeq	gene	320	3769	.	-	.	ID=gene-CYJ00_RS11265;Name=CYJ00_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11265;old_locus_tag=CYJ00_011270
NZ_PJUS02000377.1	Protein Homology	CDS	320	3769	.	-	0	ID=cds-WP_037543289.1;Parent=gene-CYJ00_RS11265;Dbxref=GenBank:WP_037543289.1;Name=WP_037543289.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614227.1;locus_tag=CYJ00_RS11265;product=pyruvate carboxylase;protein_id=WP_037543289.1;transl_table=11
##sequence-region NZ_PJUS02000058.1 1 5195
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000058.1	RefSeq	region	1	5195	.	+	.	ID=NZ_PJUS02000058.1:1..5195;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000058.1	RefSeq	gene	1	492	.	+	.	ID=gene-CYJ00_RS01655;Name=CYJ00_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01655;old_locus_tag=CYJ00_001655;partial=true;start_range=.,1
NZ_PJUS02000058.1	Protein Homology	CDS	1	492	.	+	0	ID=cds-WP_241956926.1;Parent=gene-CYJ00_RS01655;Dbxref=GenBank:WP_241956926.1;Name=WP_241956926.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=CYJ00_RS01655;partial=true;product=lactose/cellobiose PTS transporter subunit IIB;protein_id=WP_241956926.1;start_range=.,1;transl_table=11
NZ_PJUS02000058.1	RefSeq	gene	510	1916	.	+	.	ID=gene-CYJ00_RS01660;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=CYJ00_RS01660;old_locus_tag=CYJ00_001660
NZ_PJUS02000058.1	Protein Homology	CDS	510	1916	.	+	0	ID=cds-WP_037542463.1;Parent=gene-CYJ00_RS01660;Dbxref=GenBank:WP_037542463.1;Name=WP_037542463.1;Ontology_term=GO:0019512,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613258.1;locus_tag=CYJ00_RS01660;product=6-phospho-beta-galactosidase;protein_id=WP_037542463.1;transl_table=11
NZ_PJUS02000058.1	RefSeq	gene	2379	4013	.	+	.	ID=gene-CYJ00_RS01665;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=CYJ00_RS01665;old_locus_tag=CYJ00_001665
NZ_PJUS02000058.1	Protein Homology	CDS	2379	4013	.	+	0	ID=cds-WP_101457923.1;Parent=gene-CYJ00_RS01665;Dbxref=GenBank:WP_101457923.1;Name=WP_101457923.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729493.1;locus_tag=CYJ00_RS01665;product=ribosomal protection-like ABC-F family protein;protein_id=WP_101457923.1;transl_table=11
NZ_PJUS02000058.1	RefSeq	gene	4174	5163	.	-	.	ID=gene-CYJ00_RS01670;Name=CYJ00_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01670;old_locus_tag=CYJ00_001670
NZ_PJUS02000058.1	Protein Homology	CDS	4174	5163	.	-	0	ID=cds-WP_037542467.1;Parent=gene-CYJ00_RS01670;Dbxref=GenBank:WP_037542467.1;Name=WP_037542467.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729492.1;locus_tag=CYJ00_RS01670;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037542467.1;transl_table=11
##sequence-region NZ_PJUS02000181.1 1 5645
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000181.1	RefSeq	region	1	5645	.	+	.	ID=NZ_PJUS02000181.1:1..5645;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000181.1	RefSeq	gene	77	544	.	+	.	ID=gene-CYJ00_RS05000;Name=CYJ00_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05000;old_locus_tag=CYJ00_005005
NZ_PJUS02000181.1	Protein Homology	CDS	77	544	.	+	0	ID=cds-WP_014613985.1;Parent=gene-CYJ00_RS05000;Dbxref=GenBank:WP_014613985.1;Name=WP_014613985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613985.1;locus_tag=CYJ00_RS05000;product=CcdC family protein;protein_id=WP_014613985.1;transl_table=11
NZ_PJUS02000181.1	RefSeq	gene	697	1824	.	+	.	ID=gene-CYJ00_RS05005;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CYJ00_RS05005;old_locus_tag=CYJ00_005010
NZ_PJUS02000181.1	Protein Homology	CDS	697	1824	.	+	0	ID=cds-WP_080556832.1;Parent=gene-CYJ00_RS05005;Dbxref=GenBank:WP_080556832.1;Name=WP_080556832.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=CYJ00_RS05005;product=exonuclease subunit SbcD;protein_id=WP_080556832.1;transl_table=11
NZ_PJUS02000181.1	RefSeq	gene	1827	4859	.	+	.	ID=gene-CYJ00_RS05010;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CYJ00_RS05010;old_locus_tag=CYJ00_005015
NZ_PJUS02000181.1	Protein Homology	CDS	1827	4859	.	+	0	ID=cds-WP_063284357.1;Parent=gene-CYJ00_RS05010;Dbxref=GenBank:WP_063284357.1;Name=WP_063284357.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=CYJ00_RS05010;product=exonuclease subunit SbcC;protein_id=WP_063284357.1;transl_table=11
NZ_PJUS02000181.1	RefSeq	gene	5088	5444	.	-	.	ID=gene-CYJ00_RS05015;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CYJ00_RS05015;old_locus_tag=CYJ00_005020
NZ_PJUS02000181.1	Protein Homology	CDS	5088	5444	.	-	0	ID=cds-WP_101457924.1;Parent=gene-CYJ00_RS05015;Dbxref=GenBank:WP_101457924.1;Name=WP_101457924.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166560.1;locus_tag=CYJ00_RS05015;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_101457924.1;transl_table=11
##sequence-region NZ_PJUS02000313.1 1 7650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000313.1	RefSeq	region	1	7650	.	+	.	ID=NZ_PJUS02000313.1:1..7650;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000313.1	RefSeq	gene	1	1998	.	+	.	ID=gene-CYJ00_RS08430;Name=CYJ00_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08430;old_locus_tag=CYJ00_008435;partial=true;start_range=.,1
NZ_PJUS02000313.1	Protein Homology	CDS	1	1998	.	+	0	ID=cds-WP_101457925.1;Parent=gene-CYJ00_RS08430;Dbxref=GenBank:WP_101457925.1;Name=WP_101457925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=CYJ00_RS08430;partial=true;product=glycosyltransferase;protein_id=WP_101457925.1;start_range=.,1;transl_table=11
NZ_PJUS02000313.1	RefSeq	gene	2011	3879	.	+	.	ID=gene-CYJ00_RS08435;Name=CYJ00_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08435;old_locus_tag=CYJ00_008440
NZ_PJUS02000313.1	Protein Homology	CDS	2011	3879	.	+	0	ID=cds-WP_230314568.1;Parent=gene-CYJ00_RS08435;Dbxref=GenBank:WP_230314568.1;Name=WP_230314568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=CYJ00_RS08435;product=hypothetical protein;protein_id=WP_230314568.1;transl_table=11
NZ_PJUS02000313.1	RefSeq	gene	3876	4685	.	+	.	ID=gene-CYJ00_RS08440;Name=CYJ00_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08440;old_locus_tag=CYJ00_008445
NZ_PJUS02000313.1	Protein Homology	CDS	3876	4685	.	+	0	ID=cds-WP_014614302.1;Parent=gene-CYJ00_RS08440;Dbxref=GenBank:WP_014614302.1;Name=WP_014614302.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=CYJ00_RS08440;product=ABC transporter permease;protein_id=WP_014614302.1;transl_table=11
NZ_PJUS02000313.1	RefSeq	gene	4697	5887	.	+	.	ID=gene-CYJ00_RS08445;Name=CYJ00_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08445;old_locus_tag=CYJ00_008450
NZ_PJUS02000313.1	Protein Homology	CDS	4697	5887	.	+	0	ID=cds-WP_101457926.1;Parent=gene-CYJ00_RS08445;Dbxref=GenBank:WP_101457926.1;Name=WP_101457926.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=CYJ00_RS08445;product=glycosyltransferase family 4 protein;protein_id=WP_101457926.1;transl_table=11
NZ_PJUS02000313.1	RefSeq	gene	5893	6813	.	+	.	ID=gene-CYJ00_RS08450;Name=CYJ00_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08450;old_locus_tag=CYJ00_008455
NZ_PJUS02000313.1	Protein Homology	CDS	5893	6813	.	+	0	ID=cds-WP_101457927.1;Parent=gene-CYJ00_RS08450;Dbxref=GenBank:WP_101457927.1;Name=WP_101457927.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614300.1;locus_tag=CYJ00_RS08450;product=ABC transporter ATP-binding protein;protein_id=WP_101457927.1;transl_table=11
NZ_PJUS02000313.1	RefSeq	gene	6833	7648	.	+	.	ID=gene-CYJ00_RS08455;Name=CYJ00_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08455;old_locus_tag=CYJ00_008460
NZ_PJUS02000313.1	Protein Homology	CDS	6833	7648	.	+	0	ID=cds-WP_014614299.1;Parent=gene-CYJ00_RS08455;Dbxref=GenBank:WP_014614299.1;Name=WP_014614299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=CYJ00_RS08455;product=hypothetical protein;protein_id=WP_014614299.1;transl_table=11
##sequence-region NZ_PJUS02000411.1 1 5456
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000411.1	RefSeq	region	1	5456	.	+	.	ID=NZ_PJUS02000411.1:1..5456;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000411.1	RefSeq	gene	1	407	.	-	.	ID=gene-CYJ00_RS12055;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CYJ00_RS12055;old_locus_tag=CYJ00_012060;partial=true;start_range=.,1
NZ_PJUS02000411.1	Protein Homology	CDS	1	407	.	-	0	ID=cds-WP_101457928.1;Parent=gene-CYJ00_RS12055;Dbxref=GenBank:WP_101457928.1;Name=WP_101457928.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613978.1;locus_tag=CYJ00_RS12055;partial=true;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_101457928.1;start_range=.,1;transl_table=11
NZ_PJUS02000411.1	RefSeq	gene	772	3477	.	-	.	ID=gene-CYJ00_RS12060;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12060;old_locus_tag=CYJ00_012065
NZ_PJUS02000411.1	Protein Homology	CDS	772	3477	.	-	0	ID=cds-WP_063284358.1;Parent=gene-CYJ00_RS12060;Dbxref=GenBank:WP_063284358.1;Name=WP_063284358.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=CYJ00_RS12060;product=aconitate hydratase AcnA;protein_id=WP_063284358.1;transl_table=11
NZ_PJUS02000411.1	RefSeq	gene	3776	5410	.	-	.	ID=gene-CYJ00_RS12065;Name=CYJ00_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12065;old_locus_tag=CYJ00_012070
NZ_PJUS02000411.1	Protein Homology	CDS	3776	5410	.	-	0	ID=cds-WP_014613980.1;Parent=gene-CYJ00_RS12065;Dbxref=GenBank:WP_014613980.1;Name=WP_014613980.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=CYJ00_RS12065;product=BCCT family transporter;protein_id=WP_014613980.1;transl_table=11
##sequence-region NZ_PJUS02000078.1 1 4564
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000078.1	RefSeq	region	1	4564	.	+	.	ID=NZ_PJUS02000078.1:1..4564;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000078.1	RefSeq	gene	150	264	.	+	.	ID=gene-CYJ00_RS02065;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ00_RS02065;old_locus_tag=CYJ00_002065
NZ_PJUS02000078.1	cmsearch	rRNA	150	264	.	+	.	ID=rna-CYJ00_RS02065;Parent=gene-CYJ00_RS02065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS02065;product=5S ribosomal RNA
NZ_PJUS02000078.1	cmsearch	exon	150	264	.	+	.	ID=exon-CYJ00_RS02065-1;Parent=rna-CYJ00_RS02065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS02065;product=5S ribosomal RNA
NZ_PJUS02000078.1	RefSeq	gene	274	348	.	+	.	ID=gene-CYJ00_RS02070;Name=CYJ00_RS02070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02070;old_locus_tag=CYJ00_002070
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	274	348	.	+	.	ID=rna-CYJ00_RS02070;Parent=gene-CYJ00_RS02070;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02070;product=tRNA-Asn
NZ_PJUS02000078.1	tRNAscan-SE	exon	274	348	.	+	.	ID=exon-CYJ00_RS02070-1;Parent=rna-CYJ00_RS02070;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02070;product=tRNA-Asn
NZ_PJUS02000078.1	RefSeq	gene	350	421	.	+	.	ID=gene-CYJ00_RS02075;Name=CYJ00_RS02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02075;old_locus_tag=CYJ00_002075
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	350	421	.	+	.	ID=rna-CYJ00_RS02075;Parent=gene-CYJ00_RS02075;anticodon=(pos:383..385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02075;product=tRNA-Glu
NZ_PJUS02000078.1	tRNAscan-SE	exon	350	421	.	+	.	ID=exon-CYJ00_RS02075-1;Parent=rna-CYJ00_RS02075;anticodon=(pos:383..385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02075;product=tRNA-Glu
NZ_PJUS02000078.1	RefSeq	gene	431	506	.	+	.	ID=gene-CYJ00_RS02080;Name=CYJ00_RS02080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02080;old_locus_tag=CYJ00_002080
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	431	506	.	+	.	ID=rna-CYJ00_RS02080;Parent=gene-CYJ00_RS02080;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02080;product=tRNA-Val
NZ_PJUS02000078.1	tRNAscan-SE	exon	431	506	.	+	.	ID=exon-CYJ00_RS02080-1;Parent=rna-CYJ00_RS02080;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02080;product=tRNA-Val
NZ_PJUS02000078.1	RefSeq	gene	527	610	.	+	.	ID=gene-CYJ00_RS02085;Name=CYJ00_RS02085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02085;old_locus_tag=CYJ00_002085
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	527	610	.	+	.	ID=rna-CYJ00_RS02085;Parent=gene-CYJ00_RS02085;anticodon=(pos:561..563);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02085;product=tRNA-Tyr
NZ_PJUS02000078.1	tRNAscan-SE	exon	527	610	.	+	.	ID=exon-CYJ00_RS02085-1;Parent=rna-CYJ00_RS02085;anticodon=(pos:561..563);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02085;product=tRNA-Tyr
NZ_PJUS02000078.1	RefSeq	gene	618	691	.	+	.	ID=gene-CYJ00_RS02090;Name=CYJ00_RS02090;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02090;old_locus_tag=CYJ00_002090
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	618	691	.	+	.	ID=rna-CYJ00_RS02090;Parent=gene-CYJ00_RS02090;anticodon=(pos:650..652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02090;product=tRNA-Trp
NZ_PJUS02000078.1	tRNAscan-SE	exon	618	691	.	+	.	ID=exon-CYJ00_RS02090-1;Parent=rna-CYJ00_RS02090;anticodon=(pos:650..652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02090;product=tRNA-Trp
NZ_PJUS02000078.1	RefSeq	gene	694	766	.	+	.	ID=gene-CYJ00_RS02095;Name=CYJ00_RS02095;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02095;old_locus_tag=CYJ00_002095
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	694	766	.	+	.	ID=rna-CYJ00_RS02095;Parent=gene-CYJ00_RS02095;anticodon=(pos:727..729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02095;product=tRNA-His
NZ_PJUS02000078.1	tRNAscan-SE	exon	694	766	.	+	.	ID=exon-CYJ00_RS02095-1;Parent=rna-CYJ00_RS02095;anticodon=(pos:727..729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02095;product=tRNA-His
NZ_PJUS02000078.1	RefSeq	gene	783	854	.	+	.	ID=gene-CYJ00_RS02100;Name=CYJ00_RS02100;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02100;old_locus_tag=CYJ00_002100
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	783	854	.	+	.	ID=rna-CYJ00_RS02100;Parent=gene-CYJ00_RS02100;anticodon=(pos:815..817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02100;product=tRNA-Gln
NZ_PJUS02000078.1	tRNAscan-SE	exon	783	854	.	+	.	ID=exon-CYJ00_RS02100-1;Parent=rna-CYJ00_RS02100;anticodon=(pos:815..817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02100;product=tRNA-Gln
NZ_PJUS02000078.1	RefSeq	gene	863	937	.	+	.	ID=gene-CYJ00_RS02105;Name=CYJ00_RS02105;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02105;old_locus_tag=CYJ00_002105
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	863	937	.	+	.	ID=rna-CYJ00_RS02105;Parent=gene-CYJ00_RS02105;anticodon=(pos:895..897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02105;product=tRNA-Cys
NZ_PJUS02000078.1	tRNAscan-SE	exon	863	937	.	+	.	ID=exon-CYJ00_RS02105-1;Parent=rna-CYJ00_RS02105;anticodon=(pos:895..897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02105;product=tRNA-Cys
NZ_PJUS02000078.1	RefSeq	gene	952	1026	.	+	.	ID=gene-CYJ00_RS02110;Name=CYJ00_RS02110;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02110;old_locus_tag=CYJ00_002110
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	952	1026	.	+	.	ID=rna-CYJ00_RS02110;Parent=gene-CYJ00_RS02110;anticodon=(pos:985..987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02110;product=tRNA-Gly
NZ_PJUS02000078.1	tRNAscan-SE	exon	952	1026	.	+	.	ID=exon-CYJ00_RS02110-1;Parent=rna-CYJ00_RS02110;anticodon=(pos:985..987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02110;product=tRNA-Gly
NZ_PJUS02000078.1	RefSeq	gene	1060	1133	.	+	.	ID=gene-CYJ00_RS02115;Name=CYJ00_RS02115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS02115;old_locus_tag=CYJ00_002115
NZ_PJUS02000078.1	tRNAscan-SE	tRNA	1060	1133	.	+	.	ID=rna-CYJ00_RS02115;Parent=gene-CYJ00_RS02115;anticodon=(pos:1092..1094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02115;product=tRNA-Gly
NZ_PJUS02000078.1	tRNAscan-SE	exon	1060	1133	.	+	.	ID=exon-CYJ00_RS02115-1;Parent=rna-CYJ00_RS02115;anticodon=(pos:1092..1094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS02115;product=tRNA-Gly
NZ_PJUS02000078.1	RefSeq	gene	1466	1711	.	+	.	ID=gene-CYJ00_RS02120;Name=CYJ00_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02120;old_locus_tag=CYJ00_002120
NZ_PJUS02000078.1	Protein Homology	CDS	1466	1711	.	+	0	ID=cds-WP_014613511.1;Parent=gene-CYJ00_RS02120;Dbxref=GenBank:WP_014613511.1;Name=WP_014613511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166655.1;locus_tag=CYJ00_RS02120;product=hypothetical protein;protein_id=WP_014613511.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	1833	2318	.	+	.	ID=gene-CYJ00_RS02125;Name=CYJ00_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02125;old_locus_tag=CYJ00_002125
NZ_PJUS02000078.1	Protein Homology	CDS	1833	2318	.	+	0	ID=cds-WP_014613512.1;Parent=gene-CYJ00_RS02125;Dbxref=GenBank:WP_014613512.1;Name=WP_014613512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613512.1;locus_tag=CYJ00_RS02125;product=hypothetical protein;protein_id=WP_014613512.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	2340	2750	.	+	.	ID=gene-CYJ00_RS02130;Name=CYJ00_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02130;old_locus_tag=CYJ00_002130
NZ_PJUS02000078.1	Protein Homology	CDS	2340	2750	.	+	0	ID=cds-WP_101457929.1;Parent=gene-CYJ00_RS02130;Dbxref=GenBank:WP_101457929.1;Name=WP_101457929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613513.1;locus_tag=CYJ00_RS02130;product=DUF1617 family protein;protein_id=WP_101457929.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	2770	3030	.	+	.	ID=gene-CYJ00_RS02135;Name=CYJ00_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02135;old_locus_tag=CYJ00_002135
NZ_PJUS02000078.1	Protein Homology	CDS	2770	3030	.	+	0	ID=cds-WP_014613514.1;Parent=gene-CYJ00_RS02135;Dbxref=GenBank:WP_014613514.1;Name=WP_014613514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613514.1;locus_tag=CYJ00_RS02135;product=hypothetical protein;protein_id=WP_014613514.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	3097	3357	.	+	.	ID=gene-CYJ00_RS02140;Name=CYJ00_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02140;old_locus_tag=CYJ00_002140
NZ_PJUS02000078.1	GeneMarkS-2+	CDS	3097	3357	.	+	0	ID=cds-WP_014613515.1;Parent=gene-CYJ00_RS02140;Dbxref=GenBank:WP_014613515.1;Name=WP_014613515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS02140;product=hypothetical protein;protein_id=WP_014613515.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	3824	4105	.	+	.	ID=gene-CYJ00_RS02150;Name=CYJ00_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02150;old_locus_tag=CYJ00_002150
NZ_PJUS02000078.1	Protein Homology	CDS	3824	4105	.	+	0	ID=cds-WP_037542671.1;Parent=gene-CYJ00_RS02150;Dbxref=GenBank:WP_037542671.1;Name=WP_037542671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613517.1;locus_tag=CYJ00_RS02150;product=phage holin;protein_id=WP_037542671.1;transl_table=11
NZ_PJUS02000078.1	RefSeq	gene	4183	4539	.	+	.	ID=gene-CYJ00_RS02155;Name=CYJ00_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02155;old_locus_tag=CYJ00_002155
NZ_PJUS02000078.1	Protein Homology	CDS	4183	4539	.	+	0	ID=cds-WP_241536552.1;Parent=gene-CYJ00_RS02155;Dbxref=GenBank:WP_241536552.1;Name=WP_241536552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220229.1;locus_tag=CYJ00_RS02155;product=hypothetical protein;protein_id=WP_241536552.1;transl_table=11
##sequence-region NZ_PJUS02000148.1 1 4565
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000148.1	RefSeq	region	1	4565	.	+	.	ID=NZ_PJUS02000148.1:1..4565;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000148.1	RefSeq	gene	95	2047	.	+	.	ID=gene-CYJ00_RS04030;Name=CYJ00_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04030;old_locus_tag=CYJ00_004035
NZ_PJUS02000148.1	Protein Homology	CDS	95	2047	.	+	0	ID=cds-WP_099987189.1;Parent=gene-CYJ00_RS04030;Dbxref=GenBank:WP_099987189.1;Name=WP_099987189.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729418.1;locus_tag=CYJ00_RS04030;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_099987189.1;transl_table=11
NZ_PJUS02000148.1	RefSeq	gene	2410	3993	.	+	.	ID=gene-CYJ00_RS04035;Name=CYJ00_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04035;old_locus_tag=CYJ00_004040
NZ_PJUS02000148.1	Protein Homology	CDS	2410	3993	.	+	0	ID=cds-WP_100006622.1;Parent=gene-CYJ00_RS04035;Dbxref=GenBank:WP_100006622.1;Name=WP_100006622.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613401.1;locus_tag=CYJ00_RS04035;product=MutS-related protein;protein_id=WP_100006622.1;transl_table=11
##sequence-region NZ_PJUS02000271.1 1 3347
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000271.1	RefSeq	region	1	3347	.	+	.	ID=NZ_PJUS02000271.1:1..3347;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000271.1	RefSeq	gene	56	1156	.	+	.	ID=gene-CYJ00_RS07290;Name=CYJ00_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07290;old_locus_tag=CYJ00_007295
NZ_PJUS02000271.1	Protein Homology	CDS	56	1156	.	+	0	ID=cds-WP_101457930.1;Parent=gene-CYJ00_RS07290;Dbxref=GenBank:WP_101457930.1;Name=WP_101457930.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165727.1;locus_tag=CYJ00_RS07290;product=sensor histidine kinase;protein_id=WP_101457930.1;transl_table=11
NZ_PJUS02000271.1	RefSeq	gene	1153	1755	.	+	.	ID=gene-CYJ00_RS07295;Name=CYJ00_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07295;old_locus_tag=CYJ00_007300
NZ_PJUS02000271.1	Protein Homology	CDS	1153	1755	.	+	0	ID=cds-WP_015729796.1;Parent=gene-CYJ00_RS07295;Dbxref=GenBank:WP_015729796.1;Name=WP_015729796.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=CYJ00_RS07295;product=response regulator transcription factor;protein_id=WP_015729796.1;transl_table=11
NZ_PJUS02000271.1	RefSeq	gene	1883	2755	.	-	.	ID=gene-CYJ00_RS07300;Name=CYJ00_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07300;old_locus_tag=CYJ00_007305
NZ_PJUS02000271.1	Protein Homology	CDS	1883	2755	.	-	0	ID=cds-WP_015729797.1;Parent=gene-CYJ00_RS07300;Dbxref=GenBank:WP_015729797.1;Name=WP_015729797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612721.1;locus_tag=CYJ00_RS07300;product=alpha/beta hydrolase;protein_id=WP_015729797.1;transl_table=11
NZ_PJUS02000271.1	RefSeq	gene	2873	3347	.	-	.	ID=gene-CYJ00_RS07305;Name=CYJ00_RS07305;end_range=3347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07305;old_locus_tag=CYJ00_007310;partial=true
NZ_PJUS02000271.1	Protein Homology	CDS	2873	3347	.	-	1	ID=cds-WP_101457931.1;Parent=gene-CYJ00_RS07305;Dbxref=GenBank:WP_101457931.1;Name=WP_101457931.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;end_range=3347,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729798.1;locus_tag=CYJ00_RS07305;partial=true;product=arginine repressor;protein_id=WP_101457931.1;transl_table=11
##sequence-region NZ_PJUS02000239.1 1 26848
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000239.1	RefSeq	region	1	26848	.	+	.	ID=NZ_PJUS02000239.1:1..26848;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000239.1	RefSeq	gene	64	2118	.	+	.	ID=gene-CYJ00_RS06495;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ00_RS06495;old_locus_tag=CYJ00_006500
NZ_PJUS02000239.1	Protein Homology	CDS	64	2118	.	+	0	ID=cds-WP_015728544.1;Parent=gene-CYJ00_RS06495;Dbxref=GenBank:WP_015728544.1;Name=WP_015728544.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614887.1;locus_tag=CYJ00_RS06495;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_015728544.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	2362	3747	.	-	.	ID=gene-CYJ00_RS06500;Name=CYJ00_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06500;old_locus_tag=CYJ00_006505
NZ_PJUS02000239.1	Protein Homology	CDS	2362	3747	.	-	0	ID=cds-WP_014614886.1;Parent=gene-CYJ00_RS06500;Dbxref=GenBank:WP_014614886.1;Name=WP_014614886.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614886.1;locus_tag=CYJ00_RS06500;product=APC family permease;protein_id=WP_014614886.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	3753	4475	.	-	.	ID=gene-CYJ00_RS06505;Name=CYJ00_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06505;old_locus_tag=CYJ00_006510
NZ_PJUS02000239.1	Protein Homology	CDS	3753	4475	.	-	0	ID=cds-WP_063284553.1;Parent=gene-CYJ00_RS06505;Dbxref=GenBank:WP_063284553.1;Name=WP_063284553.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614885.1;locus_tag=CYJ00_RS06505;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_063284553.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	4834	5556	.	+	.	ID=gene-CYJ00_RS06510;Name=CYJ00_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06510;old_locus_tag=CYJ00_006515
NZ_PJUS02000239.1	Protein Homology	CDS	4834	5556	.	+	0	ID=cds-WP_014614884.1;Parent=gene-CYJ00_RS06510;Dbxref=GenBank:WP_014614884.1;Name=WP_014614884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614884.1;locus_tag=CYJ00_RS06510;product=hypothetical protein;protein_id=WP_014614884.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	5922	6731	.	+	.	ID=gene-CYJ00_RS06515;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=CYJ00_RS06515;old_locus_tag=CYJ00_006520
NZ_PJUS02000239.1	Protein Homology	CDS	5922	6731	.	+	0	ID=cds-WP_063284554.1;Parent=gene-CYJ00_RS06515;Dbxref=GenBank:WP_063284554.1;Name=WP_063284554.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614883.1;locus_tag=CYJ00_RS06515;product=histidine racemase CntK;protein_id=WP_063284554.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	6750	7559	.	+	.	ID=gene-CYJ00_RS06520;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=CYJ00_RS06520;old_locus_tag=CYJ00_006525
NZ_PJUS02000239.1	Protein Homology	CDS	6750	7559	.	+	0	ID=cds-WP_370863218.1;Parent=gene-CYJ00_RS06520;Dbxref=GenBank:WP_370863218.1;Name=WP_370863218.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167820.1;locus_tag=CYJ00_RS06520;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_370863218.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	7562	8857	.	+	.	ID=gene-CYJ00_RS06525;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=CYJ00_RS06525;old_locus_tag=CYJ00_006530
NZ_PJUS02000239.1	Protein Homology	CDS	7562	8857	.	+	0	ID=cds-WP_063284555.1;Parent=gene-CYJ00_RS06525;Dbxref=GenBank:WP_063284555.1;Name=WP_063284555.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614881.1;locus_tag=CYJ00_RS06525;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_063284555.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	9095	10693	.	+	.	ID=gene-CYJ00_RS06530;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06530;old_locus_tag=CYJ00_006535
NZ_PJUS02000239.1	Protein Homology	CDS	9095	10693	.	+	0	ID=cds-WP_037544074.1;Parent=gene-CYJ00_RS06530;Dbxref=GenBank:WP_037544074.1;Name=WP_037544074.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=CYJ00_RS06530;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_037544074.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	10706	11638	.	+	.	ID=gene-CYJ00_RS06535;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=CYJ00_RS06535;old_locus_tag=CYJ00_006540
NZ_PJUS02000239.1	Protein Homology	CDS	10706	11638	.	+	0	ID=cds-WP_015728548.1;Parent=gene-CYJ00_RS06535;Dbxref=GenBank:WP_015728548.1;Name=WP_015728548.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728548.1;locus_tag=CYJ00_RS06535;product=nickel/cobalt ABC transporter permease;protein_id=WP_015728548.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	11640	12503	.	+	.	ID=gene-CYJ00_RS06540;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=CYJ00_RS06540;old_locus_tag=CYJ00_006545
NZ_PJUS02000239.1	Protein Homology	CDS	11640	12503	.	+	0	ID=cds-WP_063284556.1;Parent=gene-CYJ00_RS06540;Dbxref=GenBank:WP_063284556.1;Name=WP_063284556.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614878.1;locus_tag=CYJ00_RS06540;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_063284556.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	12503	13321	.	+	.	ID=gene-CYJ00_RS06545;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=CYJ00_RS06545;old_locus_tag=CYJ00_006550
NZ_PJUS02000239.1	Protein Homology	CDS	12503	13321	.	+	0	ID=cds-WP_101457638.1;Parent=gene-CYJ00_RS06545;Dbxref=GenBank:WP_101457638.1;Name=WP_101457638.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=CYJ00_RS06545;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_101457638.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	13315	14055	.	+	.	ID=gene-CYJ00_RS06550;Name=CYJ00_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06550;old_locus_tag=CYJ00_006555
NZ_PJUS02000239.1	Protein Homology	CDS	13315	14055	.	+	0	ID=cds-WP_014614876.1;Parent=gene-CYJ00_RS06550;Dbxref=GenBank:WP_014614876.1;Name=WP_014614876.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=CYJ00_RS06550;product=ABC transporter ATP-binding protein;protein_id=WP_014614876.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	14067	15257	.	+	.	ID=gene-CYJ00_RS06555;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=CYJ00_RS06555;old_locus_tag=CYJ00_006560
NZ_PJUS02000239.1	Protein Homology	CDS	14067	15257	.	+	0	ID=cds-WP_014614875.1;Parent=gene-CYJ00_RS06555;Dbxref=GenBank:WP_014614875.1;Name=WP_014614875.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614875.1;locus_tag=CYJ00_RS06555;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_014614875.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	15451	15879	.	-	.	ID=gene-CYJ00_RS06560;Name=CYJ00_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06560;old_locus_tag=CYJ00_006565
NZ_PJUS02000239.1	Protein Homology	CDS	15451	15879	.	-	0	ID=cds-WP_014614873.1;Parent=gene-CYJ00_RS06560;Dbxref=GenBank:WP_014614873.1;Name=WP_014614873.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614873.1;locus_tag=CYJ00_RS06560;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_014614873.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	16123	17295	.	-	.	ID=gene-CYJ00_RS06565;Name=CYJ00_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06565;old_locus_tag=CYJ00_006570
NZ_PJUS02000239.1	Protein Homology	CDS	16123	17295	.	-	0	ID=cds-WP_014614872.1;Parent=gene-CYJ00_RS06565;Dbxref=GenBank:WP_014614872.1;Name=WP_014614872.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614872.1;locus_tag=CYJ00_RS06565;product=MFS transporter;protein_id=WP_014614872.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	17488	18237	.	-	.	ID=gene-CYJ00_RS06570;Name=CYJ00_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06570;old_locus_tag=CYJ00_006575
NZ_PJUS02000239.1	Protein Homology	CDS	17488	18237	.	-	0	ID=cds-WP_014614871.1;Parent=gene-CYJ00_RS06570;Dbxref=GenBank:WP_014614871.1;Name=WP_014614871.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728549.1;locus_tag=CYJ00_RS06570;product=sulfite exporter TauE/SafE family protein;protein_id=WP_014614871.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	18237	18497	.	-	.	ID=gene-CYJ00_RS06575;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=CYJ00_RS06575;old_locus_tag=CYJ00_006580
NZ_PJUS02000239.1	Protein Homology	CDS	18237	18497	.	-	0	ID=cds-WP_014614870.1;Parent=gene-CYJ00_RS06575;Dbxref=GenBank:WP_014614870.1;Name=WP_014614870.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=CYJ00_RS06575;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_014614870.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	18634	19713	.	+	.	ID=gene-CYJ00_RS06580;Name=CYJ00_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06580;old_locus_tag=CYJ00_006585
NZ_PJUS02000239.1	Protein Homology	CDS	18634	19713	.	+	0	ID=cds-WP_370498401.1;Parent=gene-CYJ00_RS06580;Dbxref=GenBank:WP_370498401.1;Name=WP_370498401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468540.1;locus_tag=CYJ00_RS06580;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_370498401.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	19732	21081	.	+	.	ID=gene-CYJ00_RS06585;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06585;old_locus_tag=CYJ00_006590
NZ_PJUS02000239.1	Protein Homology	CDS	19732	21081	.	+	0	ID=cds-WP_101457639.1;Parent=gene-CYJ00_RS06585;Dbxref=GenBank:WP_101457639.1;Name=WP_101457639.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728550.1;locus_tag=CYJ00_RS06585;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_101457639.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	21213	21773	.	+	.	ID=gene-CYJ00_RS06590;Name=CYJ00_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06590;old_locus_tag=CYJ00_006595
NZ_PJUS02000239.1	Protein Homology	CDS	21213	21773	.	+	0	ID=cds-WP_015728551.1;Parent=gene-CYJ00_RS06590;Dbxref=GenBank:WP_015728551.1;Name=WP_015728551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728551.1;locus_tag=CYJ00_RS06590;product=hypothetical protein;protein_id=WP_015728551.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	21905	22660	.	-	.	ID=gene-CYJ00_RS06595;Name=CYJ00_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06595;old_locus_tag=CYJ00_006600
NZ_PJUS02000239.1	Protein Homology	CDS	21905	22660	.	-	0	ID=cds-WP_063284557.1;Parent=gene-CYJ00_RS06595;Dbxref=GenBank:WP_063284557.1;Name=WP_063284557.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614866.1;locus_tag=CYJ00_RS06595;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063284557.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	22929	24515	.	+	.	ID=gene-CYJ00_RS06600;Name=CYJ00_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06600;old_locus_tag=CYJ00_006605
NZ_PJUS02000239.1	Protein Homology	CDS	22929	24515	.	+	0	ID=cds-WP_020220130.1;Parent=gene-CYJ00_RS06600;Dbxref=GenBank:WP_020220130.1;Name=WP_020220130.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166917.1;locus_tag=CYJ00_RS06600;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_020220130.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	24516	25841	.	+	.	ID=gene-CYJ00_RS06605;Name=CYJ00_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06605;old_locus_tag=CYJ00_006610
NZ_PJUS02000239.1	Protein Homology	CDS	24516	25841	.	+	0	ID=cds-WP_063279056.1;Parent=gene-CYJ00_RS06605;Dbxref=GenBank:WP_063279056.1;Name=WP_063279056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166916.1;locus_tag=CYJ00_RS06605;product=6-phospho-alpha-glucosidase;protein_id=WP_063279056.1;transl_table=11
NZ_PJUS02000239.1	RefSeq	gene	25931	26791	.	-	.	ID=gene-CYJ00_RS06610;Name=CYJ00_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06610;old_locus_tag=CYJ00_006615
NZ_PJUS02000239.1	Protein Homology	CDS	25931	26791	.	-	0	ID=cds-WP_015728553.1;Parent=gene-CYJ00_RS06610;Dbxref=GenBank:WP_015728553.1;Name=WP_015728553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168625.1;locus_tag=CYJ00_RS06610;product=oxidoreductase;protein_id=WP_015728553.1;transl_table=11
##sequence-region NZ_PJUS02000054.1 1 14899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000054.1	RefSeq	region	1	14899	.	+	.	ID=NZ_PJUS02000054.1:1..14899;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000054.1	RefSeq	gene	132	773	.	+	.	ID=gene-CYJ00_RS01475;Name=CYJ00_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01475;old_locus_tag=CYJ00_001475
NZ_PJUS02000054.1	Protein Homology	CDS	132	773	.	+	0	ID=cds-WP_101457680.1;Parent=gene-CYJ00_RS01475;Dbxref=GenBank:WP_101457680.1;Name=WP_101457680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166327.1;locus_tag=CYJ00_RS01475;product=hypothetical protein;protein_id=WP_101457680.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	881	1933	.	+	.	ID=gene-CYJ00_RS01480;Name=CYJ00_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01480;old_locus_tag=CYJ00_001480
NZ_PJUS02000054.1	Protein Homology	CDS	881	1933	.	+	0	ID=cds-WP_096538181.1;Parent=gene-CYJ00_RS01480;Dbxref=GenBank:WP_096538181.1;Name=WP_096538181.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729651.1;locus_tag=CYJ00_RS01480;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_096538181.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	1930	2625	.	+	.	ID=gene-CYJ00_RS01485;Name=CYJ00_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01485;old_locus_tag=CYJ00_001485
NZ_PJUS02000054.1	Protein Homology	CDS	1930	2625	.	+	0	ID=cds-WP_101457681.1;Parent=gene-CYJ00_RS01485;Dbxref=GenBank:WP_101457681.1;Name=WP_101457681.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612945.1;locus_tag=CYJ00_RS01485;product=ABC transporter ATP-binding protein;protein_id=WP_101457681.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	2609	3784	.	+	.	ID=gene-CYJ00_RS01490;Name=CYJ00_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01490;old_locus_tag=CYJ00_001490
NZ_PJUS02000054.1	Protein Homology	CDS	2609	3784	.	+	0	ID=cds-WP_063279093.1;Parent=gene-CYJ00_RS01490;Dbxref=GenBank:WP_063279093.1;Name=WP_063279093.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=CYJ00_RS01490;product=ABC transporter permease;protein_id=WP_063279093.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	4617	6704	.	-	.	ID=gene-CYJ00_RS01495;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ00_RS01495;old_locus_tag=CYJ00_001495
NZ_PJUS02000054.1	Protein Homology	CDS	4617	6704	.	-	0	ID=cds-WP_101457682.1;Parent=gene-CYJ00_RS01495;Dbxref=GenBank:WP_101457682.1;Name=WP_101457682.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612947.1;locus_tag=CYJ00_RS01495;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_101457682.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	7677	9128	.	-	.	ID=gene-CYJ00_RS01500;Name=CYJ00_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01500;old_locus_tag=CYJ00_001500
NZ_PJUS02000054.1	Protein Homology	CDS	7677	9128	.	-	0	ID=cds-WP_014614701.1;Parent=gene-CYJ00_RS01500;Dbxref=GenBank:WP_014614701.1;Name=WP_014614701.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166304.1;locus_tag=CYJ00_RS01500;product=APC family permease;protein_id=WP_014614701.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	9360	9923	.	+	.	ID=gene-CYJ00_RS01505;Name=CYJ00_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01505;old_locus_tag=CYJ00_001505
NZ_PJUS02000054.1	Protein Homology	CDS	9360	9923	.	+	0	ID=cds-WP_096636550.1;Parent=gene-CYJ00_RS01505;Dbxref=GenBank:WP_096636550.1;Name=WP_096636550.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728653.1;locus_tag=CYJ00_RS01505;product=GNAT family N-acetyltransferase;protein_id=WP_096636550.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	10157	11326	.	-	.	ID=gene-CYJ00_RS01510;Name=CYJ00_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01510;old_locus_tag=CYJ00_001510
NZ_PJUS02000054.1	Protein Homology	CDS	10157	11326	.	-	0	ID=cds-WP_063284866.1;Parent=gene-CYJ00_RS01510;Dbxref=GenBank:WP_063284866.1;Name=WP_063284866.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166302.1;locus_tag=CYJ00_RS01510;product=DUF418 domain-containing protein;protein_id=WP_063284866.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	11430	11993	.	-	.	ID=gene-CYJ00_RS01515;Name=CYJ00_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01515;old_locus_tag=CYJ00_001515
NZ_PJUS02000054.1	Protein Homology	CDS	11430	11993	.	-	0	ID=cds-WP_014614699.1;Parent=gene-CYJ00_RS01515;Dbxref=GenBank:WP_014614699.1;Name=WP_014614699.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614699.1;locus_tag=CYJ00_RS01515;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014614699.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	12120	12767	.	+	.	ID=gene-CYJ00_RS01520;Name=CYJ00_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01520;old_locus_tag=CYJ00_001520
NZ_PJUS02000054.1	Protein Homology	CDS	12120	12767	.	+	0	ID=cds-WP_020220353.1;Parent=gene-CYJ00_RS01520;Dbxref=GenBank:WP_020220353.1;Name=WP_020220353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=CYJ00_RS01520;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_020220353.1;transl_table=11
NZ_PJUS02000054.1	RefSeq	gene	12784	14637	.	+	.	ID=gene-CYJ00_RS01525;Name=CYJ00_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01525;old_locus_tag=CYJ00_001525
NZ_PJUS02000054.1	Protein Homology	CDS	12784	14637	.	+	0	ID=cds-WP_015728656.1;Parent=gene-CYJ00_RS01525;Dbxref=GenBank:WP_015728656.1;Name=WP_015728656.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728656.1;locus_tag=CYJ00_RS01525;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_015728656.1;transl_table=11
##sequence-region NZ_PJUS02000195.1 1 2725
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000195.1	RefSeq	region	1	2725	.	+	.	ID=NZ_PJUS02000195.1:1..2725;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000195.1	RefSeq	gene	47	1054	.	-	.	ID=gene-CYJ00_RS05345;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ00_RS05345;old_locus_tag=CYJ00_005350
NZ_PJUS02000195.1	Protein Homology	CDS	47	1054	.	-	0	ID=cds-WP_014612718.1;Parent=gene-CYJ00_RS05345;Dbxref=GenBank:WP_014612718.1;Name=WP_014612718.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=CYJ00_RS05345;product=ornithine carbamoyltransferase;protein_id=WP_014612718.1;transl_table=11
NZ_PJUS02000195.1	RefSeq	gene	1091	2326	.	-	.	ID=gene-CYJ00_RS05350;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05350;old_locus_tag=CYJ00_005355
NZ_PJUS02000195.1	Protein Homology	CDS	1091	2326	.	-	0	ID=cds-WP_101457932.1;Parent=gene-CYJ00_RS05350;Dbxref=GenBank:WP_101457932.1;Name=WP_101457932.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CYJ00_RS05350;product=arginine deiminase;protein_id=WP_101457932.1;transl_table=11
##sequence-region NZ_PJUS02000032.1 1 3514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000032.1	RefSeq	region	1	3514	.	+	.	ID=NZ_PJUS02000032.1:1..3514;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000032.1	RefSeq	gene	41	1693	.	+	.	ID=gene-CYJ00_RS00915;Name=CYJ00_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00915;old_locus_tag=CYJ00_000915
NZ_PJUS02000032.1	Protein Homology	CDS	41	1693	.	+	0	ID=cds-WP_101457933.1;Parent=gene-CYJ00_RS00915;Dbxref=GenBank:WP_101457933.1;Name=WP_101457933.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=CYJ00_RS00915;product=S1C family serine protease;protein_id=WP_101457933.1;transl_table=11
NZ_PJUS02000032.1	RefSeq	gene	1710	3068	.	+	.	ID=gene-CYJ00_RS00920;Name=CYJ00_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00920;old_locus_tag=CYJ00_000920
NZ_PJUS02000032.1	Protein Homology	CDS	1710	3068	.	+	0	ID=cds-WP_037543467.1;Parent=gene-CYJ00_RS00920;Dbxref=GenBank:WP_037543467.1;Name=WP_037543467.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488327.1;locus_tag=CYJ00_RS00920;product=TrkH family potassium uptake protein;protein_id=WP_037543467.1;transl_table=11
##sequence-region NZ_PJUS02000353.1 1 3750
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000353.1	RefSeq	region	1	3750	.	+	.	ID=NZ_PJUS02000353.1:1..3750;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000353.1	RefSeq	gene	44	1561	.	-	.	ID=gene-CYJ00_RS10715;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=CYJ00_RS10715;old_locus_tag=CYJ00_010720
NZ_PJUS02000353.1	Protein Homology	CDS	44	1561	.	-	0	ID=cds-WP_014614480.1;Parent=gene-CYJ00_RS10715;Dbxref=GenBank:WP_014614480.1;Name=WP_014614480.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CYJ00_RS10715;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_014614480.1;transl_table=11
NZ_PJUS02000353.1	RefSeq	gene	1564	2325	.	-	.	ID=gene-CYJ00_RS13760;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CYJ00_RS13760;old_locus_tag=CYJ00_010725
NZ_PJUS02000353.1	Protein Homology	CDS	1564	2325	.	-	0	ID=cds-WP_014614481.1;Parent=gene-CYJ00_RS13760;Dbxref=GenBank:WP_014614481.1;Name=WP_014614481.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=CYJ00_RS13760;product=triose-phosphate isomerase;protein_id=WP_014614481.1;transl_table=11
NZ_PJUS02000353.1	RefSeq	gene	2371	3561	.	-	.	ID=gene-CYJ00_RS13765;Name=CYJ00_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13765;old_locus_tag=CYJ00_010730
NZ_PJUS02000353.1	Protein Homology	CDS	2371	3561	.	-	0	ID=cds-WP_101457934.1;Parent=gene-CYJ00_RS13765;Dbxref=GenBank:WP_101457934.1;Name=WP_101457934.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614482.1;locus_tag=CYJ00_RS13765;product=phosphoglycerate kinase;protein_id=WP_101457934.1;transl_table=11
##sequence-region NZ_PJUS02000278.1 1 3092
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000278.1	RefSeq	region	1	3092	.	+	.	ID=NZ_PJUS02000278.1:1..3092;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000278.1	RefSeq	gene	309	971	.	-	.	ID=gene-CYJ00_RS07420;Name=CYJ00_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07420;old_locus_tag=CYJ00_007425
NZ_PJUS02000278.1	Protein Homology	CDS	309	971	.	-	0	ID=cds-WP_014612939.1;Parent=gene-CYJ00_RS07420;Dbxref=GenBank:WP_014612939.1;Name=WP_014612939.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166323.1;locus_tag=CYJ00_RS07420;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014612939.1;transl_table=11
NZ_PJUS02000278.1	RefSeq	gene	1084	1947	.	+	.	ID=gene-CYJ00_RS07425;Name=CYJ00_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07425;old_locus_tag=CYJ00_007430
NZ_PJUS02000278.1	Protein Homology	CDS	1084	1947	.	+	0	ID=cds-WP_015729655.1;Parent=gene-CYJ00_RS07425;Dbxref=GenBank:WP_015729655.1;Name=WP_015729655.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=CYJ00_RS07425;product=fructosamine kinase family protein;protein_id=WP_015729655.1;transl_table=11
NZ_PJUS02000278.1	RefSeq	gene	1934	2386	.	+	.	ID=gene-CYJ00_RS07430;Name=CYJ00_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07430;old_locus_tag=CYJ00_007435
NZ_PJUS02000278.1	Protein Homology	CDS	1934	2386	.	+	0	ID=cds-WP_063279097.1;Parent=gene-CYJ00_RS07430;Dbxref=GenBank:WP_063279097.1;Name=WP_063279097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612941.1;locus_tag=CYJ00_RS07430;product=DUF1648 domain-containing protein;protein_id=WP_063279097.1;transl_table=11
NZ_PJUS02000278.1	RefSeq	gene	2445	3047	.	-	.	ID=gene-CYJ00_RS07435;Name=CYJ00_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07435;old_locus_tag=CYJ00_007440
NZ_PJUS02000278.1	Protein Homology	CDS	2445	3047	.	-	0	ID=cds-WP_063279096.1;Parent=gene-CYJ00_RS07435;Dbxref=GenBank:WP_063279096.1;Name=WP_063279096.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729653.1;locus_tag=CYJ00_RS07435;product=YIP1 family protein;protein_id=WP_063279096.1;transl_table=11
##sequence-region NZ_PJUS02000165.1 1 3566
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000165.1	RefSeq	region	1	3566	.	+	.	ID=NZ_PJUS02000165.1:1..3566;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000165.1	RefSeq	gene	646	1101	.	+	.	ID=gene-CYJ00_RS04675;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=CYJ00_RS04675;old_locus_tag=CYJ00_004680
NZ_PJUS02000165.1	Protein Homology	CDS	646	1101	.	+	0	ID=cds-WP_014614941.1;Parent=gene-CYJ00_RS04675;Dbxref=GenBank:WP_014614941.1;Name=WP_014614941.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=CYJ00_RS04675;product=urease accessory protein UreE;protein_id=WP_014614941.1;transl_table=11
NZ_PJUS02000165.1	RefSeq	gene	1094	1786	.	+	.	ID=gene-CYJ00_RS04680;Name=CYJ00_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04680;old_locus_tag=CYJ00_004685
NZ_PJUS02000165.1	Protein Homology	CDS	1094	1786	.	+	0	ID=cds-WP_015728508.1;Parent=gene-CYJ00_RS04680;Dbxref=GenBank:WP_015728508.1;Name=WP_015728508.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=CYJ00_RS04680;product=urease accessory protein UreF;protein_id=WP_015728508.1;transl_table=11
NZ_PJUS02000165.1	RefSeq	gene	1799	2410	.	+	.	ID=gene-CYJ00_RS04685;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04685;old_locus_tag=CYJ00_004690
NZ_PJUS02000165.1	Protein Homology	CDS	1799	2410	.	+	0	ID=cds-WP_014614939.1;Parent=gene-CYJ00_RS04685;Dbxref=GenBank:WP_014614939.1;Name=WP_014614939.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614939.1;locus_tag=CYJ00_RS04685;product=urease accessory protein UreG;protein_id=WP_014614939.1;transl_table=11
NZ_PJUS02000165.1	RefSeq	gene	2410	3243	.	+	.	ID=gene-CYJ00_RS04690;Name=CYJ00_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04690;old_locus_tag=CYJ00_004695
NZ_PJUS02000165.1	Protein Homology	CDS	2410	3243	.	+	0	ID=cds-WP_014614938.1;Parent=gene-CYJ00_RS04690;Dbxref=GenBank:WP_014614938.1;Name=WP_014614938.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=CYJ00_RS04690;product=urease accessory protein UreD;protein_id=WP_014614938.1;transl_table=11
##sequence-region NZ_PJUS02000393.1 1 4256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000393.1	RefSeq	region	1	4256	.	+	.	ID=NZ_PJUS02000393.1:1..4256;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000393.1	RefSeq	gene	1	712	.	-	.	ID=gene-CYJ00_RS11560;Name=CYJ00_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11560;old_locus_tag=CYJ00_011565;partial=true;start_range=.,1
NZ_PJUS02000393.1	Protein Homology	CDS	1	712	.	-	0	ID=cds-WP_101457935.1;Parent=gene-CYJ00_RS11560;Dbxref=GenBank:WP_101457935.1;Name=WP_101457935.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431776.1;locus_tag=CYJ00_RS11560;partial=true;product=diacylglycerol/lipid kinase family protein;protein_id=WP_101457935.1;start_range=.,1;transl_table=11
NZ_PJUS02000393.1	RefSeq	gene	847	2349	.	-	.	ID=gene-CYJ00_RS11565;Name=CYJ00_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11565;old_locus_tag=CYJ00_011570
NZ_PJUS02000393.1	Protein Homology	CDS	847	2349	.	-	0	ID=cds-WP_014614533.1;Parent=gene-CYJ00_RS11565;Dbxref=GenBank:WP_014614533.1;Name=WP_014614533.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614533.1;locus_tag=CYJ00_RS11565;product=peptide MFS transporter;protein_id=WP_014614533.1;transl_table=11
NZ_PJUS02000393.1	RefSeq	gene	2700	4205	.	-	.	ID=gene-CYJ00_RS11570;Name=CYJ00_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11570;old_locus_tag=CYJ00_011575
NZ_PJUS02000393.1	Protein Homology	CDS	2700	4205	.	-	0	ID=cds-WP_014614532.1;Parent=gene-CYJ00_RS11570;Dbxref=GenBank:WP_014614532.1;Name=WP_014614532.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=CYJ00_RS11570;product=peptide MFS transporter;protein_id=WP_014614532.1;transl_table=11
##sequence-region NZ_PJUS02000293.1 1 4387
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000293.1	RefSeq	region	1	4387	.	+	.	ID=NZ_PJUS02000293.1:1..4387;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000293.1	RefSeq	pseudogene	1	162	.	-	.	ID=gene-CYJ00_RS13945;Name=CYJ00_RS13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13945;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000293.1	Protein Homology	CDS	1	162	.	-	0	ID=cds-CYJ00_RS13945;Parent=gene-CYJ00_RS13945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729433.1;locus_tag=CYJ00_RS13945;partial=true;product=membrane protein insertase YidC;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000293.1	RefSeq	gene	251	889	.	-	.	ID=gene-CYJ00_RS07765;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07765;old_locus_tag=CYJ00_007770
NZ_PJUS02000293.1	Protein Homology	CDS	251	889	.	-	0	ID=cds-WP_063284943.1;Parent=gene-CYJ00_RS07765;Dbxref=GenBank:WP_063284943.1;Name=WP_063284943.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613359.1;locus_tag=CYJ00_RS07765;product=thiamine phosphate synthase;protein_id=WP_063284943.1;transl_table=11
NZ_PJUS02000293.1	RefSeq	gene	879	1682	.	-	.	ID=gene-CYJ00_RS07770;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CYJ00_RS07770;old_locus_tag=CYJ00_007775
NZ_PJUS02000293.1	Protein Homology	CDS	879	1682	.	-	0	ID=cds-WP_014613358.1;Parent=gene-CYJ00_RS07770;Dbxref=GenBank:WP_014613358.1;Name=WP_014613358.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165813.1;locus_tag=CYJ00_RS07770;product=hydroxyethylthiazole kinase;protein_id=WP_014613358.1;transl_table=11
NZ_PJUS02000293.1	RefSeq	gene	1684	2490	.	-	.	ID=gene-CYJ00_RS07775;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07775;old_locus_tag=CYJ00_007780
NZ_PJUS02000293.1	Protein Homology	CDS	1684	2490	.	-	0	ID=cds-WP_014613357.1;Parent=gene-CYJ00_RS07775;Dbxref=GenBank:WP_014613357.1;Name=WP_014613357.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=CYJ00_RS07775;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014613357.1;transl_table=11
NZ_PJUS02000293.1	RefSeq	gene	2490	3173	.	-	.	ID=gene-CYJ00_RS07780;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07780;old_locus_tag=CYJ00_007785
NZ_PJUS02000293.1	Protein Homology	CDS	2490	3173	.	-	0	ID=cds-WP_014613356.1;Parent=gene-CYJ00_RS07780;Dbxref=GenBank:WP_014613356.1;Name=WP_014613356.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729435.1;locus_tag=CYJ00_RS07780;product=thiaminase II;protein_id=WP_014613356.1;transl_table=11
NZ_PJUS02000293.1	cmsearch	riboswitch	3240	3343	.	-	.	ID=id-NZ_PJUS02000293.1:3240..3343;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000293.1	RefSeq	gene	3757	4113	.	-	.	ID=gene-CYJ00_RS07785;Name=CYJ00_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07785;old_locus_tag=CYJ00_007790
NZ_PJUS02000293.1	Protein Homology	CDS	3757	4113	.	-	0	ID=cds-WP_015729436.1;Parent=gene-CYJ00_RS07785;Dbxref=GenBank:WP_015729436.1;Name=WP_015729436.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729436.1;locus_tag=CYJ00_RS07785;product=single-stranded DNA-binding protein;protein_id=WP_015729436.1;transl_table=11
NZ_PJUS02000293.1	RefSeq	gene	4294	4387	.	+	.	ID=gene-CYJ00_RS13810;Name=CYJ00_RS13810;end_range=4387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13810;partial=true
NZ_PJUS02000293.1	Protein Homology	CDS	4294	4387	.	+	0	ID=cds-WP_274539976.1;Parent=gene-CYJ00_RS13810;Dbxref=GenBank:WP_274539976.1;Name=WP_274539976.1;end_range=4387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613354.1;locus_tag=CYJ00_RS13810;partial=true;product=YwpF family protein;protein_id=WP_274539976.1;transl_table=11
##sequence-region NZ_PJUS02000024.1 1 3174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000024.1	RefSeq	region	1	3174	.	+	.	ID=NZ_PJUS02000024.1:1..3174;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000024.1	RefSeq	gene	322	894	.	-	.	ID=gene-CYJ00_RS00665;Name=CYJ00_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00665;old_locus_tag=CYJ00_000665
NZ_PJUS02000024.1	Protein Homology	CDS	322	894	.	-	0	ID=cds-WP_101457936.1;Parent=gene-CYJ00_RS00665;Dbxref=GenBank:WP_101457936.1;Name=WP_101457936.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612695.1;locus_tag=CYJ00_RS00665;product=helix-turn-helix domain-containing protein;protein_id=WP_101457936.1;transl_table=11
NZ_PJUS02000024.1	RefSeq	gene	1077	3125	.	-	.	ID=gene-CYJ00_RS00670;Name=CYJ00_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00670;old_locus_tag=CYJ00_000670
NZ_PJUS02000024.1	Protein Homology	CDS	1077	3125	.	-	0	ID=cds-WP_181856696.1;Parent=gene-CYJ00_RS00670;Dbxref=GenBank:WP_181856696.1;Name=WP_181856696.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=CYJ00_RS00670;product=heavy metal translocating P-type ATPase;protein_id=WP_181856696.1;transl_table=11
##sequence-region NZ_PJUS02000153.1 1 3579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000153.1	RefSeq	region	1	3579	.	+	.	ID=NZ_PJUS02000153.1:1..3579;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000153.1	RefSeq	pseudogene	1	3579	.	+	.	ID=gene-CYJ00_RS04275;Name=spsJ;end_range=3579,.;gbkey=Gene;gene=spsJ;gene_biotype=pseudogene;locus_tag=CYJ00_RS04275;old_locus_tag=CYJ00_004280;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000153.1	Protein Homology	CDS	1	3579	.	+	2	ID=cds-CYJ00_RS04275;Parent=gene-CYJ00_RS04275;Note=All full-length members of this family of proteins%2C SpsJ from Staphylococcus pseudintermedius or closely related species%2C are very long%2C starting with a KxYKxGKxW type signal peptide and ending with an LPXTG-containing sorting signal for anchoring to the cell wall. SpsJ is encoded in a locus that contains genes of the accessory Sec system%2C is rich in Ser residues likely to be glycosylated%2C and is likely to play a major role in determining the host range and tissue tropisms. Staphylococcus pseudintermedius is best known as pathogen of dogs and other domestic animals%2C but occasionally affects humans as well.%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=3579,.;gbkey=CDS;gene=spsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612818.1;locus_tag=CYJ00_RS04275;partial=true;product=accessory Sec-dependent glycoprotein adhesin SpsJ;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000269.1 1 3115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000269.1	RefSeq	region	1	3115	.	+	.	ID=NZ_PJUS02000269.1:1..3115;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000269.1	RefSeq	gene	179	991	.	+	.	ID=gene-CYJ00_RS07270;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07270;old_locus_tag=CYJ00_007275
NZ_PJUS02000269.1	Protein Homology	CDS	179	991	.	+	0	ID=cds-WP_014614862.1;Parent=gene-CYJ00_RS07270;Dbxref=GenBank:WP_014614862.1;Name=WP_014614862.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614862.1;locus_tag=CYJ00_RS07270;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014614862.1;transl_table=11
NZ_PJUS02000269.1	RefSeq	gene	988	1848	.	+	.	ID=gene-CYJ00_RS07275;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CYJ00_RS07275;old_locus_tag=CYJ00_007280
NZ_PJUS02000269.1	Protein Homology	CDS	988	1848	.	+	0	ID=cds-WP_014614861.1;Parent=gene-CYJ00_RS07275;Dbxref=GenBank:WP_014614861.1;Name=WP_014614861.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166913.1;locus_tag=CYJ00_RS07275;product=pantoate--beta-alanine ligase;protein_id=WP_014614861.1;transl_table=11
NZ_PJUS02000269.1	RefSeq	gene	1845	2228	.	+	.	ID=gene-CYJ00_RS07280;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07280;old_locus_tag=CYJ00_007285
NZ_PJUS02000269.1	Protein Homology	CDS	1845	2228	.	+	0	ID=cds-WP_014614860.1;Parent=gene-CYJ00_RS07280;Dbxref=GenBank:WP_014614860.1;Name=WP_014614860.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=CYJ00_RS07280;product=aspartate 1-decarboxylase;protein_id=WP_014614860.1;transl_table=11
NZ_PJUS02000269.1	RefSeq	gene	2346	3050	.	-	.	ID=gene-CYJ00_RS07285;Name=CYJ00_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07285;old_locus_tag=CYJ00_007290
NZ_PJUS02000269.1	Protein Homology	CDS	2346	3050	.	-	0	ID=cds-WP_020220128.1;Parent=gene-CYJ00_RS07285;Dbxref=GenBank:WP_020220128.1;Name=WP_020220128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110168517.1;locus_tag=CYJ00_RS07285;product=exotoxin SpEX;protein_id=WP_020220128.1;transl_table=11
##sequence-region NZ_PJUS02000387.1 1 13440
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000387.1	RefSeq	region	1	13440	.	+	.	ID=NZ_PJUS02000387.1:1..13440;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000387.1	RefSeq	gene	38	523	.	+	.	ID=gene-CYJ00_RS11420;Name=CYJ00_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11420;old_locus_tag=CYJ00_011425
NZ_PJUS02000387.1	Protein Homology	CDS	38	523	.	+	0	ID=cds-WP_014612744.1;Parent=gene-CYJ00_RS11420;Dbxref=GenBank:WP_014612744.1;Name=WP_014612744.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612744.1;locus_tag=CYJ00_RS11420;product=cation:proton antiporter regulatory subunit;protein_id=WP_014612744.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	529	1701	.	+	.	ID=gene-CYJ00_RS11425;Name=CYJ00_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11425;old_locus_tag=CYJ00_011430
NZ_PJUS02000387.1	Protein Homology	CDS	529	1701	.	+	0	ID=cds-WP_100006965.1;Parent=gene-CYJ00_RS11425;Dbxref=GenBank:WP_100006965.1;Name=WP_100006965.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612743.1;locus_tag=CYJ00_RS11425;product=cation:proton antiporter;protein_id=WP_100006965.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	2134	3231	.	+	.	ID=gene-CYJ00_RS11430;Name=CYJ00_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11430;old_locus_tag=CYJ00_011435
NZ_PJUS02000387.1	Protein Homology	CDS	2134	3231	.	+	0	ID=cds-WP_014612742.1;Parent=gene-CYJ00_RS11430;Dbxref=GenBank:WP_014612742.1;Name=WP_014612742.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498772.1;locus_tag=CYJ00_RS11430;product=ABC transporter ATP-binding protein;protein_id=WP_014612742.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	3244	4503	.	+	.	ID=gene-CYJ00_RS11435;Name=CYJ00_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11435;old_locus_tag=CYJ00_011440
NZ_PJUS02000387.1	Protein Homology	CDS	3244	4503	.	+	0	ID=cds-WP_015729782.1;Parent=gene-CYJ00_RS11435;Dbxref=GenBank:WP_015729782.1;Name=WP_015729782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729782.1;locus_tag=CYJ00_RS11435;product=extracellular solute-binding protein;protein_id=WP_015729782.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	4518	5786	.	+	.	ID=gene-CYJ00_RS11440;Name=CYJ00_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11440;old_locus_tag=CYJ00_011445
NZ_PJUS02000387.1	Protein Homology	CDS	4518	5786	.	+	0	ID=cds-WP_014612740.1;Parent=gene-CYJ00_RS11440;Dbxref=GenBank:WP_014612740.1;Name=WP_014612740.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498774.1;locus_tag=CYJ00_RS11440;product=sugar ABC transporter permease;protein_id=WP_014612740.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	5788	6627	.	+	.	ID=gene-CYJ00_RS11445;Name=CYJ00_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11445;old_locus_tag=CYJ00_011450
NZ_PJUS02000387.1	Protein Homology	CDS	5788	6627	.	+	0	ID=cds-WP_101457683.1;Parent=gene-CYJ00_RS11445;Dbxref=GenBank:WP_101457683.1;Name=WP_101457683.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166790.1;locus_tag=CYJ00_RS11445;product=sugar ABC transporter permease;protein_id=WP_101457683.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	6678	6998	.	-	.	ID=gene-CYJ00_RS11450;Name=CYJ00_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11450;old_locus_tag=CYJ00_011455
NZ_PJUS02000387.1	Protein Homology	CDS	6678	6998	.	-	0	ID=cds-WP_241956997.1;Parent=gene-CYJ00_RS11450;Dbxref=GenBank:WP_241956997.1;Name=WP_241956997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166788.1;locus_tag=CYJ00_RS11450;product=hypothetical protein;protein_id=WP_241956997.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	7194	8840	.	-	.	ID=gene-CYJ00_RS11455;Name=CYJ00_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11455;old_locus_tag=CYJ00_011460
NZ_PJUS02000387.1	Protein Homology	CDS	7194	8840	.	-	0	ID=cds-WP_198597699.1;Parent=gene-CYJ00_RS11455;Dbxref=GenBank:WP_198597699.1;Name=WP_198597699.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364983.1;locus_tag=CYJ00_RS11455;product=glycoside hydrolase family 13 protein;protein_id=WP_198597699.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	8887	9855	.	-	.	ID=gene-CYJ00_RS11460;Name=CYJ00_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11460;old_locus_tag=CYJ00_011465
NZ_PJUS02000387.1	Protein Homology	CDS	8887	9855	.	-	0	ID=cds-WP_063278676.1;Parent=gene-CYJ00_RS11460;Dbxref=GenBank:WP_063278676.1;Name=WP_063278676.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498778.1;locus_tag=CYJ00_RS11460;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_063278676.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	9871	10911	.	-	.	ID=gene-CYJ00_RS11465;Name=CYJ00_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11465;old_locus_tag=CYJ00_011470
NZ_PJUS02000387.1	Protein Homology	CDS	9871	10911	.	-	0	ID=cds-WP_014612735.1;Parent=gene-CYJ00_RS11465;Dbxref=GenBank:WP_014612735.1;Name=WP_014612735.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729785.1;locus_tag=CYJ00_RS11465;product=Gfo/Idh/MocA family protein;protein_id=WP_014612735.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	10933	12009	.	-	.	ID=gene-CYJ00_RS11470;Name=CYJ00_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11470;old_locus_tag=CYJ00_011475
NZ_PJUS02000387.1	Protein Homology	CDS	10933	12009	.	-	0	ID=cds-WP_101457686.1;Parent=gene-CYJ00_RS11470;Dbxref=GenBank:WP_101457686.1;Name=WP_101457686.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498776.1;locus_tag=CYJ00_RS11470;product=Gfo/Idh/MocA family protein;protein_id=WP_101457686.1;transl_table=11
NZ_PJUS02000387.1	RefSeq	gene	12195	13175	.	-	.	ID=gene-CYJ00_RS11475;Name=CYJ00_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11475;old_locus_tag=CYJ00_011480
NZ_PJUS02000387.1	Protein Homology	CDS	12195	13175	.	-	0	ID=cds-WP_020220073.1;Parent=gene-CYJ00_RS11475;Dbxref=GenBank:WP_020220073.1;Name=WP_020220073.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729787.1;locus_tag=CYJ00_RS11475;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220073.1;transl_table=11
##sequence-region NZ_PJUS02000344.1 1 3252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000344.1	RefSeq	region	1	3252	.	+	.	ID=NZ_PJUS02000344.1:1..3252;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000344.1	RefSeq	gene	59	1021	.	-	.	ID=gene-CYJ00_RS10560;Name=CYJ00_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10560;old_locus_tag=CYJ00_010565
NZ_PJUS02000344.1	Protein Homology	CDS	59	1021	.	-	0	ID=cds-WP_014613275.1;Parent=gene-CYJ00_RS10560;Dbxref=GenBank:WP_014613275.1;Name=WP_014613275.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613275.1;locus_tag=CYJ00_RS10560;product=FecCD family ABC transporter permease;protein_id=WP_014613275.1;transl_table=11
NZ_PJUS02000344.1	RefSeq	gene	1018	2043	.	-	.	ID=gene-CYJ00_RS10565;Name=CYJ00_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10565;old_locus_tag=CYJ00_010570
NZ_PJUS02000344.1	Protein Homology	CDS	1018	2043	.	-	0	ID=cds-WP_101457938.1;Parent=gene-CYJ00_RS10565;Dbxref=GenBank:WP_101457938.1;Name=WP_101457938.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165080.1;locus_tag=CYJ00_RS10565;product=FecCD family ABC transporter permease;protein_id=WP_101457938.1;transl_table=11
NZ_PJUS02000344.1	RefSeq	gene	2187	3176	.	-	.	ID=gene-CYJ00_RS10570;Name=CYJ00_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10570;old_locus_tag=CYJ00_010575
NZ_PJUS02000344.1	Protein Homology	CDS	2187	3176	.	-	0	ID=cds-WP_014613273.1;Parent=gene-CYJ00_RS10570;Dbxref=GenBank:WP_014613273.1;Name=WP_014613273.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168333.1;locus_tag=CYJ00_RS10570;product=ABC transporter substrate-binding protein;protein_id=WP_014613273.1;transl_table=11
##sequence-region NZ_PJUS02000004.1 1 2606
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000004.1	RefSeq	region	1	2606	.	+	.	ID=NZ_PJUS02000004.1:1..2606;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000004.1	RefSeq	gene	108	2606	.	+	.	ID=gene-CYJ00_RS00115;Name=CYJ00_RS00115;end_range=2606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00115;old_locus_tag=CYJ00_000115;partial=true
NZ_PJUS02000004.1	Protein Homology	CDS	108	2606	.	+	0	ID=cds-WP_198597660.1;Parent=gene-CYJ00_RS00115;Dbxref=GenBank:WP_198597660.1;Name=WP_198597660.1;end_range=2606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612818.1;locus_tag=CYJ00_RS00115;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;protein_id=WP_198597660.1;transl_table=11
##sequence-region NZ_PJUS02000118.1 1 4393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000118.1	RefSeq	region	1	4393	.	+	.	ID=NZ_PJUS02000118.1:1..4393;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000118.1	RefSeq	gene	15	653	.	-	.	ID=gene-CYJ00_RS03390;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=CYJ00_RS03390;old_locus_tag=CYJ00_003395
NZ_PJUS02000118.1	Protein Homology	CDS	15	653	.	-	0	ID=cds-WP_014614363.1;Parent=gene-CYJ00_RS03390;Dbxref=GenBank:WP_014614363.1;Name=WP_014614363.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614363.1;locus_tag=CYJ00_RS03390;product=GTP diphosphokinase;protein_id=WP_014614363.1;transl_table=11
NZ_PJUS02000118.1	RefSeq	gene	670	1017	.	-	.	ID=gene-CYJ00_RS03395;Name=CYJ00_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03395;old_locus_tag=CYJ00_003400
NZ_PJUS02000118.1	Protein Homology	CDS	670	1017	.	-	0	ID=cds-WP_101457939.1;Parent=gene-CYJ00_RS03395;Dbxref=GenBank:WP_101457939.1;Name=WP_101457939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276223.1;locus_tag=CYJ00_RS03395;product=UPF0738 family protein;protein_id=WP_101457939.1;transl_table=11
NZ_PJUS02000118.1	RefSeq	gene	1148	1729	.	+	.	ID=gene-CYJ00_RS03400;Name=CYJ00_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03400;old_locus_tag=CYJ00_003405
NZ_PJUS02000118.1	Protein Homology	CDS	1148	1729	.	+	0	ID=cds-WP_015728889.1;Parent=gene-CYJ00_RS03400;Dbxref=GenBank:WP_015728889.1;Name=WP_015728889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728889.1;locus_tag=CYJ00_RS03400;product=CYTH domain-containing protein;protein_id=WP_015728889.1;transl_table=11
NZ_PJUS02000118.1	RefSeq	gene	2077	2448	.	+	.	ID=gene-CYJ00_RS03405;Name=CYJ00_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03405;old_locus_tag=CYJ00_003410
NZ_PJUS02000118.1	Protein Homology	CDS	2077	2448	.	+	0	ID=cds-WP_015728888.1;Parent=gene-CYJ00_RS03405;Dbxref=GenBank:WP_015728888.1;Name=WP_015728888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167281.1;locus_tag=CYJ00_RS03405;product=truncated hemoglobin YjbI;protein_id=WP_015728888.1;transl_table=11
NZ_PJUS02000118.1	RefSeq	gene	2465	3253	.	+	.	ID=gene-CYJ00_RS03410;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=CYJ00_RS03410;old_locus_tag=CYJ00_003415
NZ_PJUS02000118.1	Protein Homology	CDS	2465	3253	.	+	0	ID=cds-WP_014614367.1;Parent=gene-CYJ00_RS03410;Dbxref=GenBank:WP_014614367.1;Name=WP_014614367.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=CYJ00_RS03410;product=protease adaptor protein YjbH;protein_id=WP_014614367.1;transl_table=11
NZ_PJUS02000118.1	RefSeq	gene	3501	4229	.	-	.	ID=gene-CYJ00_RS03415;Name=CYJ00_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03415;old_locus_tag=CYJ00_003420
NZ_PJUS02000118.1	Protein Homology	CDS	3501	4229	.	-	0	ID=cds-WP_015728887.1;Parent=gene-CYJ00_RS03415;Dbxref=GenBank:WP_015728887.1;Name=WP_015728887.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728887.1;locus_tag=CYJ00_RS03415;product=M48 family metallopeptidase;protein_id=WP_015728887.1;transl_table=11
##sequence-region NZ_PJUS02000432.1 1 5066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000432.1	RefSeq	region	1	5066	.	+	.	ID=NZ_PJUS02000432.1:1..5066;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000432.1	RefSeq	pseudogene	1	191	.	-	.	ID=gene-CYJ00_RS12875;Name=CYJ00_RS12875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12875;old_locus_tag=CYJ00_012880;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000432.1	Protein Homology	CDS	1	191	.	-	0	ID=cds-CYJ00_RS12875;Parent=gene-CYJ00_RS12875;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ00_RS12875;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	297	758	.	-	.	ID=gene-CYJ00_RS12880;Name=CYJ00_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12880;old_locus_tag=CYJ00_012885
NZ_PJUS02000432.1	Protein Homology	CDS	297	758	.	-	0	ID=cds-WP_014613283.1;Parent=gene-CYJ00_RS12880;Dbxref=GenBank:WP_014613283.1;Name=WP_014613283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168476.1;locus_tag=CYJ00_RS12880;product=SepA family multidrug efflux transporter;protein_id=WP_014613283.1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	784	2127	.	-	.	ID=gene-CYJ00_RS12885;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=CYJ00_RS12885;old_locus_tag=CYJ00_012890
NZ_PJUS02000432.1	Protein Homology	CDS	784	2127	.	-	0	ID=cds-WP_037542485.1;Parent=gene-CYJ00_RS12885;Dbxref=GenBank:WP_037542485.1;Name=WP_037542485.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165088.1;locus_tag=CYJ00_RS12885;product=multidrug efflux MFS transporter SdrM;protein_id=WP_037542485.1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	2680	2877	.	-	.	ID=gene-CYJ00_RS12890;Name=CYJ00_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12890;old_locus_tag=CYJ00_012895
NZ_PJUS02000432.1	Protein Homology	CDS	2680	2877	.	-	0	ID=cds-WP_014613281.1;Parent=gene-CYJ00_RS12890;Dbxref=GenBank:WP_014613281.1;Name=WP_014613281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729476.1;locus_tag=CYJ00_RS12890;product=hypothetical protein;protein_id=WP_014613281.1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	2890	3570	.	-	.	ID=gene-CYJ00_RS12895;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12895;old_locus_tag=CYJ00_012900
NZ_PJUS02000432.1	Protein Homology	CDS	2890	3570	.	-	0	ID=cds-WP_014613280.1;Parent=gene-CYJ00_RS12895;Dbxref=GenBank:WP_014613280.1;Name=WP_014613280.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=CYJ00_RS12895;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_014613280.1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	3581	4771	.	-	.	ID=gene-CYJ00_RS12900;Name=CYJ00_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12900;old_locus_tag=CYJ00_012905
NZ_PJUS02000432.1	Protein Homology	CDS	3581	4771	.	-	0	ID=cds-WP_014613279.1;Parent=gene-CYJ00_RS12900;Dbxref=GenBank:WP_014613279.1;Name=WP_014613279.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613279.1;locus_tag=CYJ00_RS12900;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_014613279.1;transl_table=11
NZ_PJUS02000432.1	RefSeq	gene	4844	5066	.	-	.	ID=gene-CYJ00_RS12905;Name=CYJ00_RS12905;end_range=5066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12905;old_locus_tag=CYJ00_012910;partial=true
NZ_PJUS02000432.1	Protein Homology	CDS	4844	5066	.	-	1	ID=cds-WP_198597702.1;Parent=gene-CYJ00_RS12905;Dbxref=GenBank:WP_198597702.1;Name=WP_198597702.1;end_range=5066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=CYJ00_RS12905;partial=true;product=metal-dependent hydrolase;protein_id=WP_198597702.1;transl_table=11
##sequence-region NZ_PJUS02000052.1 1 4124
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000052.1	RefSeq	region	1	4124	.	+	.	ID=NZ_PJUS02000052.1:1..4124;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000052.1	RefSeq	gene	4	813	.	+	.	ID=gene-CYJ00_RS01440;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01440;old_locus_tag=CYJ00_001440
NZ_PJUS02000052.1	Protein Homology	CDS	4	813	.	+	0	ID=cds-WP_341351417.1;Parent=gene-CYJ00_RS01440;Dbxref=GenBank:WP_341351417.1;Name=WP_341351417.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728699.1;locus_tag=CYJ00_RS01440;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_341351417.1;transl_table=11
NZ_PJUS02000052.1	RefSeq	gene	1027	1821	.	-	.	ID=gene-CYJ00_RS01445;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CYJ00_RS01445;old_locus_tag=CYJ00_001445
NZ_PJUS02000052.1	Protein Homology	CDS	1027	1821	.	-	0	ID=cds-WP_014614625.1;Parent=gene-CYJ00_RS01445;Dbxref=GenBank:WP_014614625.1;Name=WP_014614625.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CYJ00_RS01445;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_014614625.1;transl_table=11
NZ_PJUS02000052.1	RefSeq	gene	2100	2903	.	+	.	ID=gene-CYJ00_RS01450;Name=CYJ00_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01450;old_locus_tag=CYJ00_001450
NZ_PJUS02000052.1	Protein Homology	CDS	2100	2903	.	+	0	ID=cds-WP_100006992.1;Parent=gene-CYJ00_RS01450;Dbxref=GenBank:WP_100006992.1;Name=WP_100006992.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=CYJ00_RS01450;product=ABC transporter permease;protein_id=WP_100006992.1;transl_table=11
NZ_PJUS02000052.1	RefSeq	gene	2978	4069	.	+	.	ID=gene-CYJ00_RS01455;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01455;old_locus_tag=CYJ00_001455
NZ_PJUS02000052.1	Protein Homology	CDS	2978	4069	.	+	0	ID=cds-WP_014614623.1;Parent=gene-CYJ00_RS01455;Dbxref=GenBank:WP_014614623.1;Name=WP_014614623.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=CYJ00_RS01455;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_014614623.1;transl_table=11
##sequence-region NZ_PJUS02000192.1 1 4282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000192.1	RefSeq	region	1	4282	.	+	.	ID=NZ_PJUS02000192.1:1..4282;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000192.1	RefSeq	gene	223	1626	.	-	.	ID=gene-CYJ00_RS05245;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CYJ00_RS05245;old_locus_tag=CYJ00_005250
NZ_PJUS02000192.1	Protein Homology	CDS	223	1626	.	-	0	ID=cds-WP_014613560.1;Parent=gene-CYJ00_RS05245;Dbxref=GenBank:WP_014613560.1;Name=WP_014613560.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164996.1;locus_tag=CYJ00_RS05245;product=protoporphyrinogen oxidase;protein_id=WP_014613560.1;transl_table=11
NZ_PJUS02000192.1	RefSeq	gene	1632	2564	.	-	.	ID=gene-CYJ00_RS05250;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CYJ00_RS05250;old_locus_tag=CYJ00_005255
NZ_PJUS02000192.1	Protein Homology	CDS	1632	2564	.	-	0	ID=cds-WP_014613559.1;Parent=gene-CYJ00_RS05250;Dbxref=GenBank:WP_014613559.1;Name=WP_014613559.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=CYJ00_RS05250;product=ferrochelatase;protein_id=WP_014613559.1;transl_table=11
NZ_PJUS02000192.1	RefSeq	gene	2602	3636	.	-	.	ID=gene-CYJ00_RS05255;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CYJ00_RS05255;old_locus_tag=CYJ00_005260
NZ_PJUS02000192.1	Protein Homology	CDS	2602	3636	.	-	0	ID=cds-WP_014613558.1;Parent=gene-CYJ00_RS05255;Dbxref=GenBank:WP_014613558.1;Name=WP_014613558.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500461.1;locus_tag=CYJ00_RS05255;product=uroporphyrinogen decarboxylase;protein_id=WP_014613558.1;transl_table=11
NZ_PJUS02000192.1	RefSeq	gene	3948	4282	.	+	.	ID=gene-CYJ00_RS05260;Name=CYJ00_RS05260;end_range=4282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05260;old_locus_tag=CYJ00_005265;partial=true
NZ_PJUS02000192.1	Protein Homology	CDS	3948	4282	.	+	0	ID=cds-WP_101457941.1;Parent=gene-CYJ00_RS05260;Dbxref=GenBank:WP_101457941.1;Name=WP_101457941.1;end_range=4282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729357.1;locus_tag=CYJ00_RS05260;partial=true;product=signal transduction protein TRAP;protein_id=WP_101457941.1;transl_table=11
##sequence-region NZ_PJUS02000312.1 1 3830
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000312.1	RefSeq	region	1	3830	.	+	.	ID=NZ_PJUS02000312.1:1..3830;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000312.1	RefSeq	gene	194	1183	.	+	.	ID=gene-CYJ00_RS08410;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08410;old_locus_tag=CYJ00_008415
NZ_PJUS02000312.1	Protein Homology	CDS	194	1183	.	+	0	ID=cds-WP_014614375.1;Parent=gene-CYJ00_RS08410;Dbxref=GenBank:WP_014614375.1;Name=WP_014614375.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=CYJ00_RS08410;product=tryptophan--tRNA ligase;protein_id=WP_014614375.1;transl_table=11
NZ_PJUS02000312.1	RefSeq	gene	1741	2595	.	-	.	ID=gene-CYJ00_RS08415;Name=CYJ00_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08415;old_locus_tag=CYJ00_008420
NZ_PJUS02000312.1	Protein Homology	CDS	1741	2595	.	-	0	ID=cds-WP_014613299.1;Parent=gene-CYJ00_RS08415;Dbxref=GenBank:WP_014613299.1;Name=WP_014613299.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729462.1;locus_tag=CYJ00_RS08415;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014613299.1;transl_table=11
NZ_PJUS02000312.1	RefSeq	gene	2670	3449	.	-	.	ID=gene-CYJ00_RS08420;Name=CYJ00_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08420;old_locus_tag=CYJ00_008425
NZ_PJUS02000312.1	Protein Homology	CDS	2670	3449	.	-	0	ID=cds-WP_096533645.1;Parent=gene-CYJ00_RS08420;Dbxref=GenBank:WP_096533645.1;Name=WP_096533645.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=CYJ00_RS08420;product=ABC transporter ATP-binding protein;protein_id=WP_096533645.1;transl_table=11
NZ_PJUS02000312.1	RefSeq	gene	3557	3830	.	-	.	ID=gene-CYJ00_RS08425;Name=CYJ00_RS08425;end_range=3830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08425;old_locus_tag=CYJ00_008430;partial=true
NZ_PJUS02000312.1	GeneMarkS-2+	CDS	3557	3830	.	-	1	ID=cds-WP_241956951.1;Parent=gene-CYJ00_RS08425;Dbxref=GenBank:WP_241956951.1;Name=WP_241956951.1;end_range=3830,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS08425;partial=true;product=hypothetical protein;protein_id=WP_241956951.1;transl_table=11
##sequence-region NZ_PJUS02000430.1 1 3911
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000430.1	RefSeq	region	1	3911	.	+	.	ID=NZ_PJUS02000430.1:1..3911;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000430.1	RefSeq	gene	1	596	.	+	.	ID=gene-CYJ00_RS12795;Name=CYJ00_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12795;old_locus_tag=CYJ00_012800;partial=true;start_range=.,1
NZ_PJUS02000430.1	Protein Homology	CDS	1	596	.	+	2	ID=cds-WP_341351422.1;Parent=gene-CYJ00_RS12795;Dbxref=GenBank:WP_341351422.1;Name=WP_341351422.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=CYJ00_RS12795;partial=true;product=MBOAT family O-acyltransferase;protein_id=WP_341351422.1;start_range=.,1;transl_table=11
NZ_PJUS02000430.1	RefSeq	gene	609	845	.	+	.	ID=gene-CYJ00_RS12800;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12800;old_locus_tag=CYJ00_012805
NZ_PJUS02000430.1	Protein Homology	CDS	609	845	.	+	0	ID=cds-WP_015728919.1;Parent=gene-CYJ00_RS12800;Dbxref=GenBank:WP_015728919.1;Name=WP_015728919.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CYJ00_RS12800;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_015728919.1;transl_table=11
NZ_PJUS02000430.1	RefSeq	gene	842	1984	.	+	.	ID=gene-CYJ00_RS12805;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CYJ00_RS12805;old_locus_tag=CYJ00_012810
NZ_PJUS02000430.1	Protein Homology	CDS	842	1984	.	+	0	ID=cds-WP_101457942.1;Parent=gene-CYJ00_RS12805;Dbxref=GenBank:WP_101457942.1;Name=WP_101457942.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614339.1;locus_tag=CYJ00_RS12805;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_101457942.1;transl_table=11
NZ_PJUS02000430.1	RefSeq	gene	2561	3911	.	-	.	ID=gene-CYJ00_RS12810;Name=CYJ00_RS12810;end_range=3911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12810;old_locus_tag=CYJ00_012815;partial=true
NZ_PJUS02000430.1	Protein Homology	CDS	2561	3911	.	-	1	ID=cds-WP_101457943.1;Parent=gene-CYJ00_RS12810;Dbxref=GenBank:WP_101457943.1;Name=WP_101457943.1;Ontology_term=GO:0005886,GO:0016020;end_range=3911,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168550.1;locus_tag=CYJ00_RS12810;partial=true;product=hemolysin family protein;protein_id=WP_101457943.1;transl_table=11
##sequence-region NZ_PJUS02000123.1 1 3838
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000123.1	RefSeq	region	1	3838	.	+	.	ID=NZ_PJUS02000123.1:1..3838;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000123.1	RefSeq	gene	45	1376	.	+	.	ID=gene-CYJ00_RS03485;Name=CYJ00_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03485;old_locus_tag=CYJ00_003490
NZ_PJUS02000123.1	Protein Homology	CDS	45	1376	.	+	0	ID=cds-WP_015728940.1;Parent=gene-CYJ00_RS03485;Dbxref=GenBank:WP_015728940.1;Name=WP_015728940.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=CYJ00_RS03485;product=glycosyltransferase;protein_id=WP_015728940.1;transl_table=11
NZ_PJUS02000123.1	RefSeq	gene	1486	2121	.	+	.	ID=gene-CYJ00_RS03490;Name=CYJ00_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03490;old_locus_tag=CYJ00_003495
NZ_PJUS02000123.1	Protein Homology	CDS	1486	2121	.	+	0	ID=cds-WP_014614297.1;Parent=gene-CYJ00_RS03490;Dbxref=GenBank:WP_014614297.1;Name=WP_014614297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614297.1;locus_tag=CYJ00_RS03490;product=PepSY domain-containing protein;protein_id=WP_014614297.1;transl_table=11
NZ_PJUS02000123.1	RefSeq	gene	2820	3725	.	-	.	ID=gene-CYJ00_RS03495;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03495;old_locus_tag=CYJ00_003500
NZ_PJUS02000123.1	Protein Homology	CDS	2820	3725	.	-	0	ID=cds-WP_015728941.1;Parent=gene-CYJ00_RS03495;Dbxref=GenBank:WP_015728941.1;Name=WP_015728941.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728941.1;locus_tag=CYJ00_RS03495;product=ribonucleoside hydrolase RihC;protein_id=WP_015728941.1;transl_table=11
##sequence-region NZ_PJUS02000233.1 1 4284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000233.1	RefSeq	region	1	4284	.	+	.	ID=NZ_PJUS02000233.1:1..4284;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000233.1	RefSeq	gene	1	420	.	-	.	ID=gene-CYJ00_RS06395;Name=CYJ00_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06395;old_locus_tag=CYJ00_006400;partial=true;start_range=.,1
NZ_PJUS02000233.1	Protein Homology	CDS	1	420	.	-	0	ID=cds-WP_241956944.1;Parent=gene-CYJ00_RS06395;Dbxref=GenBank:WP_241956944.1;Name=WP_241956944.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=CYJ00_RS06395;partial=true;product=GntR family transcriptional regulator;protein_id=WP_241956944.1;start_range=.,1;transl_table=11
NZ_PJUS02000233.1	RefSeq	gene	744	2186	.	+	.	ID=gene-CYJ00_RS06400;Name=CYJ00_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06400;old_locus_tag=CYJ00_006405
NZ_PJUS02000233.1	Protein Homology	CDS	744	2186	.	+	0	ID=cds-WP_014612701.1;Parent=gene-CYJ00_RS06400;Dbxref=GenBank:WP_014612701.1;Name=WP_014612701.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165696.1;locus_tag=CYJ00_RS06400;product=6-phospho-beta-glucosidase;protein_id=WP_014612701.1;transl_table=11
NZ_PJUS02000233.1	RefSeq	pseudogene	3041	4284	.	+	.	ID=gene-CYJ00_RS06405;Name=spsL;end_range=4284,.;gbkey=Gene;gene=spsL;gene_biotype=pseudogene;locus_tag=CYJ00_RS06405;old_locus_tag=CYJ00_006410;partial=true;pseudo=true
NZ_PJUS02000233.1	Protein Homology	CDS	3041	4284	.	+	0	ID=cds-CYJ00_RS06405;Parent=gene-CYJ00_RS06405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4284,.;gbkey=CDS;gene=spsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ00_RS06405;partial=true;product=fibronectin-binding surface protein SpsL;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000290.1 1 15579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000290.1	RefSeq	region	1	15579	.	+	.	ID=NZ_PJUS02000290.1:1..15579;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000290.1	RefSeq	gene	34	564	.	+	.	ID=gene-CYJ00_RS07695;Name=CYJ00_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07695;old_locus_tag=CYJ00_007700
NZ_PJUS02000290.1	Protein Homology	CDS	34	564	.	+	0	ID=cds-WP_037542110.1;Parent=gene-CYJ00_RS07695;Dbxref=GenBank:WP_037542110.1;Name=WP_037542110.1;Ontology_term=GO:0016151,GO:0016765;gbkey=CDS;go_function=nickel cation binding|0016151||IEA,transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612795.1;locus_tag=CYJ00_RS07695;product=YfiT family bacillithiol transferase;protein_id=WP_037542110.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	812	2302	.	+	.	ID=gene-CYJ00_RS07700;Name=CYJ00_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07700;old_locus_tag=CYJ00_007705
NZ_PJUS02000290.1	Protein Homology	CDS	812	2302	.	+	0	ID=cds-WP_014612796.1;Parent=gene-CYJ00_RS07700;Dbxref=GenBank:WP_014612796.1;Name=WP_014612796.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=CYJ00_RS07700;product=catalase;protein_id=WP_014612796.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	2518	2841	.	+	.	ID=gene-CYJ00_RS07705;Name=CYJ00_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07705;old_locus_tag=CYJ00_007710
NZ_PJUS02000290.1	Protein Homology	CDS	2518	2841	.	+	0	ID=cds-WP_101457148.1;Parent=gene-CYJ00_RS07705;Dbxref=GenBank:WP_101457148.1;Name=WP_101457148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612797.1;locus_tag=CYJ00_RS07705;product=hypothetical protein;protein_id=WP_101457148.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	2963	3409	.	+	.	ID=gene-CYJ00_RS07710;Name=CYJ00_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07710;old_locus_tag=CYJ00_007715
NZ_PJUS02000290.1	Protein Homology	CDS	2963	3409	.	+	0	ID=cds-WP_037542111.1;Parent=gene-CYJ00_RS07710;Dbxref=GenBank:WP_037542111.1;Name=WP_037542111.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166850.1;locus_tag=CYJ00_RS07710;product=Dps family protein;protein_id=WP_037542111.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	4376	5752	.	+	.	ID=gene-CYJ00_RS07715;Name=CYJ00_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07715;old_locus_tag=CYJ00_007720
NZ_PJUS02000290.1	Protein Homology	CDS	4376	5752	.	+	0	ID=cds-WP_099991773.1;Parent=gene-CYJ00_RS07715;Dbxref=GenBank:WP_099991773.1;Name=WP_099991773.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612801.1;locus_tag=CYJ00_RS07715;product=sodium:solute symporter family protein;protein_id=WP_099991773.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	5815	6972	.	+	.	ID=gene-CYJ00_RS07720;Name=CYJ00_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07720;old_locus_tag=CYJ00_007725
NZ_PJUS02000290.1	Protein Homology	CDS	5815	6972	.	+	0	ID=cds-WP_014612802.1;Parent=gene-CYJ00_RS07720;Dbxref=GenBank:WP_014612802.1;Name=WP_014612802.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612802.1;locus_tag=CYJ00_RS07720;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014612802.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	7188	8783	.	+	.	ID=gene-CYJ00_RS07725;Name=CYJ00_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07725;old_locus_tag=CYJ00_007730
NZ_PJUS02000290.1	Protein Homology	CDS	7188	8783	.	+	0	ID=cds-WP_101457687.1;Parent=gene-CYJ00_RS07725;Dbxref=GenBank:WP_101457687.1;Name=WP_101457687.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612803.1;locus_tag=CYJ00_RS07725;product=xylulokinase;protein_id=WP_101457687.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	9025	10134	.	+	.	ID=gene-CYJ00_RS07730;Name=CYJ00_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07730;old_locus_tag=CYJ00_007735
NZ_PJUS02000290.1	Protein Homology	CDS	9025	10134	.	+	0	ID=cds-WP_014612804.1;Parent=gene-CYJ00_RS07730;Dbxref=GenBank:WP_014612804.1;Name=WP_014612804.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168901.1;locus_tag=CYJ00_RS07730;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014612804.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	10128	11462	.	+	.	ID=gene-CYJ00_RS07735;Name=CYJ00_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07735;old_locus_tag=CYJ00_007740
NZ_PJUS02000290.1	Protein Homology	CDS	10128	11462	.	+	0	ID=cds-WP_063278660.1;Parent=gene-CYJ00_RS07735;Dbxref=GenBank:WP_063278660.1;Name=WP_063278660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729755.1;locus_tag=CYJ00_RS07735;product=nucleoside recognition domain-containing protein;protein_id=WP_063278660.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	11594	12643	.	+	.	ID=gene-CYJ00_RS07740;Name=CYJ00_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07740;old_locus_tag=CYJ00_007745
NZ_PJUS02000290.1	Protein Homology	CDS	11594	12643	.	+	0	ID=cds-WP_063284836.1;Parent=gene-CYJ00_RS07740;Dbxref=GenBank:WP_063284836.1;Name=WP_063284836.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=CYJ00_RS07740;product=ABC transporter permease;protein_id=WP_063284836.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	12656	13318	.	+	.	ID=gene-CYJ00_RS07745;Name=CYJ00_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07745;old_locus_tag=CYJ00_007750
NZ_PJUS02000290.1	Protein Homology	CDS	12656	13318	.	+	0	ID=cds-WP_037542118.1;Parent=gene-CYJ00_RS07745;Dbxref=GenBank:WP_037542118.1;Name=WP_037542118.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612807.1;locus_tag=CYJ00_RS07745;product=ABC transporter ATP-binding protein;protein_id=WP_037542118.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	13405	13827	.	+	.	ID=gene-CYJ00_RS07750;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=CYJ00_RS07750;old_locus_tag=CYJ00_007755
NZ_PJUS02000290.1	Protein Homology	CDS	13405	13827	.	+	0	ID=cds-WP_014612808.1;Parent=gene-CYJ00_RS07750;Dbxref=GenBank:WP_014612808.1;Name=WP_014612808.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168905.1;locus_tag=CYJ00_RS07750;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_014612808.1;transl_table=11
NZ_PJUS02000290.1	RefSeq	gene	13828	15153	.	+	.	ID=gene-CYJ00_RS07755;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07755;old_locus_tag=CYJ00_007760
NZ_PJUS02000290.1	Protein Homology	CDS	13828	15153	.	+	0	ID=cds-WP_014612809.1;Parent=gene-CYJ00_RS07755;Dbxref=GenBank:WP_014612809.1;Name=WP_014612809.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612809.1;locus_tag=CYJ00_RS07755;product=hypothiocyanous acid reductase MerA;protein_id=WP_014612809.1;transl_table=11
##sequence-region NZ_PJUS02000343.1 1 4198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000343.1	RefSeq	region	1	4198	.	+	.	ID=NZ_PJUS02000343.1:1..4198;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000343.1	RefSeq	gene	32	850	.	+	.	ID=gene-CYJ00_RS10540;Name=CYJ00_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10540;old_locus_tag=CYJ00_010545
NZ_PJUS02000343.1	Protein Homology	CDS	32	850	.	+	0	ID=cds-WP_014614236.1;Parent=gene-CYJ00_RS10540;Dbxref=GenBank:WP_014614236.1;Name=WP_014614236.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614236.1;locus_tag=CYJ00_RS10540;product=inositol monophosphatase family protein;protein_id=WP_014614236.1;transl_table=11
NZ_PJUS02000343.1	RefSeq	gene	1078	1269	.	-	.	ID=gene-CYJ00_RS10545;Name=CYJ00_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10545;old_locus_tag=CYJ00_010550
NZ_PJUS02000343.1	Protein Homology	CDS	1078	1269	.	-	0	ID=cds-WP_225549974.1;Parent=gene-CYJ00_RS10545;Dbxref=GenBank:WP_225549974.1;Name=WP_225549974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446184.1;locus_tag=CYJ00_RS10545;product=DUF5325 family protein;protein_id=WP_225549974.1;transl_table=11
NZ_PJUS02000343.1	RefSeq	gene	1360	3210	.	+	.	ID=gene-CYJ00_RS10550;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10550;old_locus_tag=CYJ00_010555
NZ_PJUS02000343.1	Protein Homology	CDS	1360	3210	.	+	0	ID=cds-WP_014614234.1;Parent=gene-CYJ00_RS10550;Dbxref=GenBank:WP_014614234.1;Name=WP_014614234.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614234.1;locus_tag=CYJ00_RS10550;product=translational GTPase TypA;protein_id=WP_014614234.1;transl_table=11
NZ_PJUS02000343.1	RefSeq	gene	3639	4198	.	+	.	ID=gene-CYJ00_RS10555;Name=CYJ00_RS10555;end_range=4198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10555;old_locus_tag=CYJ00_010560;partial=true
NZ_PJUS02000343.1	Protein Homology	CDS	3639	4198	.	+	0	ID=cds-WP_490327967.1;Parent=gene-CYJ00_RS10555;Dbxref=GenBank:WP_490327967.1;Name=WP_490327967.1;Ontology_term=GO:0010181,GO:0016491;end_range=4198,.;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439060.1;locus_tag=CYJ00_RS10555;partial=true;product=oxidoreductase;protein_id=WP_490327967.1;transl_table=11
##sequence-region NZ_PJUS02000014.1 1 4269
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000014.1	RefSeq	region	1	4269	.	+	.	ID=NZ_PJUS02000014.1:1..4269;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000014.1	RefSeq	gene	1	596	.	-	.	ID=gene-CYJ00_RS00455;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00455;old_locus_tag=CYJ00_000455;partial=true;start_range=.,1
NZ_PJUS02000014.1	Protein Homology	CDS	1	596	.	-	0	ID=cds-WP_101457944.1;Parent=gene-CYJ00_RS00455;Dbxref=GenBank:WP_101457944.1;Name=WP_101457944.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CYJ00_RS00455;partial=true;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_101457944.1;start_range=.,1;transl_table=11
NZ_PJUS02000014.1	RefSeq	gene	586	2574	.	-	.	ID=gene-CYJ00_RS00460;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00460;old_locus_tag=CYJ00_000460
NZ_PJUS02000014.1	Protein Homology	CDS	586	2574	.	-	0	ID=cds-WP_031253657.1;Parent=gene-CYJ00_RS00460;Dbxref=GenBank:WP_031253657.1;Name=WP_031253657.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CYJ00_RS00460;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_031253657.1;transl_table=11
NZ_PJUS02000014.1	RefSeq	gene	2577	3677	.	-	.	ID=gene-CYJ00_RS00465;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00465;old_locus_tag=CYJ00_000465
NZ_PJUS02000014.1	Protein Homology	CDS	2577	3677	.	-	0	ID=cds-WP_014614285.1;Parent=gene-CYJ00_RS00465;Dbxref=GenBank:WP_014614285.1;Name=WP_014614285.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614285.1;locus_tag=CYJ00_RS00465;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_014614285.1;transl_table=11
##sequence-region NZ_PJUS02000154.1 1 5237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000154.1	RefSeq	region	1	5237	.	+	.	ID=NZ_PJUS02000154.1:1..5237;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000154.1	RefSeq	gene	1	383	.	-	.	ID=gene-CYJ00_RS04280;Name=CYJ00_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04280;old_locus_tag=CYJ00_004285;partial=true;start_range=.,1
NZ_PJUS02000154.1	Protein Homology	CDS	1	383	.	-	0	ID=cds-WP_133158326.1;Parent=gene-CYJ00_RS04280;Dbxref=GenBank:WP_133158326.1;Name=WP_133158326.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=CYJ00_RS04280;partial=true;product=DeoR family transcriptional regulator;protein_id=WP_133158326.1;start_range=.,1;transl_table=11
NZ_PJUS02000154.1	RefSeq	gene	486	1607	.	-	.	ID=gene-CYJ00_RS04285;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CYJ00_RS04285;old_locus_tag=CYJ00_004290
NZ_PJUS02000154.1	Protein Homology	CDS	486	1607	.	-	0	ID=cds-WP_096533274.1;Parent=gene-CYJ00_RS04285;Dbxref=GenBank:WP_096533274.1;Name=WP_096533274.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=CYJ00_RS04285;product=radical SAM family heme chaperone HemW;protein_id=WP_096533274.1;transl_table=11
NZ_PJUS02000154.1	RefSeq	gene	1675	3498	.	-	.	ID=gene-CYJ00_RS04290;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04290;old_locus_tag=CYJ00_004295
NZ_PJUS02000154.1	Protein Homology	CDS	1675	3498	.	-	0	ID=cds-WP_014613772.1;Parent=gene-CYJ00_RS04290;Dbxref=GenBank:WP_014613772.1;Name=WP_014613772.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=CYJ00_RS04290;product=translation elongation factor 4;protein_id=WP_014613772.1;transl_table=11
NZ_PJUS02000154.1	RefSeq	gene	3821	4069	.	+	.	ID=gene-CYJ00_RS04295;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CYJ00_RS04295;old_locus_tag=CYJ00_004300
NZ_PJUS02000154.1	Protein Homology	CDS	3821	4069	.	+	0	ID=cds-WP_014613771.1;Parent=gene-CYJ00_RS04295;Dbxref=GenBank:WP_014613771.1;Name=WP_014613771.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=CYJ00_RS04295;product=30S ribosomal protein S20;protein_id=WP_014613771.1;transl_table=11
NZ_PJUS02000154.1	RefSeq	gene	4243	5217	.	-	.	ID=gene-CYJ00_RS04300;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04300;old_locus_tag=CYJ00_004305
NZ_PJUS02000154.1	Protein Homology	CDS	4243	5217	.	-	0	ID=cds-WP_015729255.1;Parent=gene-CYJ00_RS04300;Dbxref=GenBank:WP_015729255.1;Name=WP_015729255.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729255.1;locus_tag=CYJ00_RS04300;product=DNA polymerase III subunit delta;protein_id=WP_015729255.1;transl_table=11
##sequence-region NZ_PJUS02000158.1 1 2475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000158.1	RefSeq	region	1	2475	.	+	.	ID=NZ_PJUS02000158.1:1..2475;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000158.1	RefSeq	gene	166	1485	.	+	.	ID=gene-CYJ00_RS04450;Name=CYJ00_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04450;old_locus_tag=CYJ00_004455
NZ_PJUS02000158.1	Protein Homology	CDS	166	1485	.	+	0	ID=cds-WP_101457945.1;Parent=gene-CYJ00_RS04450;Dbxref=GenBank:WP_101457945.1;Name=WP_101457945.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ00_RS04450;product=ISL3 family transposase;protein_id=WP_101457945.1;transl_table=11
NZ_PJUS02000158.1	RefSeq	pseudogene	1635	1859	.	+	.	ID=gene-CYJ00_RS04455;Name=CYJ00_RS04455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS04455;old_locus_tag=CYJ00_004460;partial=true;pseudo=true;start_range=.,1635
NZ_PJUS02000158.1	Protein Homology	CDS	1635	1859	.	+	0	ID=cds-CYJ00_RS04455;Parent=gene-CYJ00_RS04455;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS04455;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,1635;transl_table=11
NZ_PJUS02000158.1	RefSeq	gene	1939	2475	.	+	.	ID=gene-CYJ00_RS04460;Name=CYJ00_RS04460;end_range=2475,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04460;old_locus_tag=CYJ00_004465;partial=true
NZ_PJUS02000158.1	Protein Homology	CDS	1939	2475	.	+	0	ID=cds-WP_133158327.1;Parent=gene-CYJ00_RS04460;Dbxref=GenBank:WP_133158327.1;Name=WP_133158327.1;Ontology_term=GO:0003676;end_range=2475,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204270.1;locus_tag=CYJ00_RS04460;partial=true;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_133158327.1;transl_table=11
##sequence-region NZ_PJUS02000037.1 1 3022
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000037.1	RefSeq	region	1	3022	.	+	.	ID=NZ_PJUS02000037.1:1..3022;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000037.1	RefSeq	pseudogene	1	2934	.	+	.	ID=gene-CYJ00_RS01110;Name=spsM;gbkey=Gene;gene=spsM;gene_biotype=pseudogene;locus_tag=CYJ00_RS01110;old_locus_tag=CYJ00_001110;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000037.1	Protein Homology	CDS	1	2934	.	+	0	ID=cds-CYJ00_RS01110;Parent=gene-CYJ00_RS01110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=spsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612726.1;locus_tag=CYJ00_RS01110;partial=true;product=LPXTG-anchored surface protein SpsM;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000416.1 1 3246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000416.1	RefSeq	region	1	3246	.	+	.	ID=NZ_PJUS02000416.1:1..3246;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000416.1	RefSeq	pseudogene	1	351	.	-	.	ID=gene-CYJ00_RS12390;Name=CYJ00_RS12390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12390;old_locus_tag=CYJ00_012395;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000416.1	Protein Homology	CDS	1	351	.	-	0	ID=cds-CYJ00_RS12390;Parent=gene-CYJ00_RS12390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728519.1;locus_tag=CYJ00_RS12390;partial=true;product=Abi family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000416.1	RefSeq	gene	542	784	.	-	.	ID=gene-CYJ00_RS12395;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CYJ00_RS12395;old_locus_tag=CYJ00_012400
NZ_PJUS02000416.1	Protein Homology	CDS	542	784	.	-	0	ID=cds-WP_014614919.1;Parent=gene-CYJ00_RS12395;Dbxref=GenBank:WP_014614919.1;Name=WP_014614919.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=CYJ00_RS12395;product=30S ribosomal protein S18;protein_id=WP_014614919.1;transl_table=11
NZ_PJUS02000416.1	RefSeq	gene	838	1344	.	-	.	ID=gene-CYJ00_RS12400;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CYJ00_RS12400;old_locus_tag=CYJ00_012405
NZ_PJUS02000416.1	Protein Homology	CDS	838	1344	.	-	0	ID=cds-WP_014614920.1;Parent=gene-CYJ00_RS12400;Dbxref=GenBank:WP_014614920.1;Name=WP_014614920.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=CYJ00_RS12400;product=single-stranded DNA-binding protein;protein_id=WP_014614920.1;transl_table=11
NZ_PJUS02000416.1	RefSeq	gene	1367	1663	.	-	.	ID=gene-CYJ00_RS12405;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CYJ00_RS12405;old_locus_tag=CYJ00_012410
NZ_PJUS02000416.1	Protein Homology	CDS	1367	1663	.	-	0	ID=cds-WP_014614921.1;Parent=gene-CYJ00_RS12405;Dbxref=GenBank:WP_014614921.1;Name=WP_014614921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=CYJ00_RS12405;product=30S ribosomal protein S6;protein_id=WP_014614921.1;transl_table=11
NZ_PJUS02000416.1	RefSeq	gene	2000	3246	.	+	.	ID=gene-CYJ00_RS12410;Name=sbi;end_range=3246,.;gbkey=Gene;gene=sbi;gene_biotype=protein_coding;gene_synonym=spsK;locus_tag=CYJ00_RS12410;old_locus_tag=CYJ00_012415;partial=true
NZ_PJUS02000416.1	Protein Homology	CDS	2000	3246	.	+	0	ID=cds-WP_101457946.1;Parent=gene-CYJ00_RS12410;Dbxref=GenBank:WP_101457946.1;Name=WP_101457946.1;end_range=3246,.;gbkey=CDS;gene=sbi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614922.1;locus_tag=CYJ00_RS12410;partial=true;product=Ig-binding surface protein Sbi/SpsK;protein_id=WP_101457946.1;transl_table=11
##sequence-region NZ_PJUS02000080.1 1 2898
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000080.1	RefSeq	region	1	2898	.	+	.	ID=NZ_PJUS02000080.1:1..2898;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000080.1	RefSeq	pseudogene	35	604	.	-	.	ID=gene-CYJ00_RS02195;Name=CYJ00_RS02195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS02195;old_locus_tag=CYJ00_002195;partial=true;pseudo=true;start_range=.,35
NZ_PJUS02000080.1	Protein Homology	CDS	35	604	.	-	0	ID=cds-CYJ00_RS02195;Parent=gene-CYJ00_RS02195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CYJ00_RS02195;partial=true;product=PfkB family carbohydrate kinase;pseudo=true;start_range=.,35;transl_table=11
NZ_PJUS02000080.1	RefSeq	gene	785	1462	.	+	.	ID=gene-CYJ00_RS02200;Name=CYJ00_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02200;old_locus_tag=CYJ00_002200
NZ_PJUS02000080.1	Protein Homology	CDS	785	1462	.	+	0	ID=cds-WP_284730556.1;Parent=gene-CYJ00_RS02200;Dbxref=GenBank:WP_284730556.1;Name=WP_284730556.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=CYJ00_RS02200;product=uracil-DNA glycosylase;protein_id=WP_284730556.1;transl_table=11
NZ_PJUS02000080.1	RefSeq	gene	1455	1778	.	+	.	ID=gene-CYJ00_RS02205;Name=CYJ00_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02205;old_locus_tag=CYJ00_002205
NZ_PJUS02000080.1	Protein Homology	CDS	1455	1778	.	+	0	ID=cds-WP_015728648.1;Parent=gene-CYJ00_RS02205;Dbxref=GenBank:WP_015728648.1;Name=WP_015728648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=CYJ00_RS02205;product=DUF5327 family protein;protein_id=WP_015728648.1;transl_table=11
NZ_PJUS02000080.1	RefSeq	gene	1806	2168	.	+	.	ID=gene-CYJ00_RS02210;Name=CYJ00_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02210;old_locus_tag=CYJ00_002210
NZ_PJUS02000080.1	Protein Homology	CDS	1806	2168	.	+	0	ID=cds-WP_014614702.1;Parent=gene-CYJ00_RS02210;Dbxref=GenBank:WP_014614702.1;Name=WP_014614702.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=CYJ00_RS02210;product=DUF423 domain-containing protein;protein_id=WP_014614702.1;transl_table=11
NZ_PJUS02000080.1	RefSeq	gene	2574	2898	.	-	.	ID=gene-CYJ00_RS02215;Name=CYJ00_RS02215;end_range=2898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02215;old_locus_tag=CYJ00_002215;partial=true
NZ_PJUS02000080.1	Protein Homology	CDS	2574	2898	.	-	1	ID=cds-WP_133158315.1;Parent=gene-CYJ00_RS02215;Dbxref=GenBank:WP_133158315.1;Name=WP_133158315.1;Ontology_term=GO:0004803;end_range=2898,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014373851.1;locus_tag=CYJ00_RS02215;partial=true;product=IS30 family transposase;protein_id=WP_133158315.1;transl_table=11
##sequence-region NZ_PJUS02000189.1 1 3728
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000189.1	RefSeq	region	1	3728	.	+	.	ID=NZ_PJUS02000189.1:1..3728;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000189.1	RefSeq	gene	159	1673	.	+	.	ID=gene-CYJ00_RS05225;Name=CYJ00_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05225;old_locus_tag=CYJ00_005230
NZ_PJUS02000189.1	Protein Homology	CDS	159	1673	.	+	0	ID=cds-WP_063284627.1;Parent=gene-CYJ00_RS05225;Dbxref=GenBank:WP_063284627.1;Name=WP_063284627.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614334.1;locus_tag=CYJ00_RS05225;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_063284627.1;transl_table=11
NZ_PJUS02000189.1	RefSeq	gene	1769	3728	.	-	.	ID=gene-CYJ00_RS05230;Name=CYJ00_RS05230;end_range=3728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05230;old_locus_tag=CYJ00_005235;partial=true
NZ_PJUS02000189.1	Protein Homology	CDS	1769	3728	.	-	1	ID=cds-WP_133158330.1;Parent=gene-CYJ00_RS05230;Dbxref=GenBank:WP_133158330.1;Name=WP_133158330.1;end_range=3728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ00_RS05230;partial=true;product=SdrD B-like domain-containing protein;protein_id=WP_133158330.1;transl_table=11
##sequence-region NZ_PJUS02000362.1 1 2975
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000362.1	RefSeq	region	1	2975	.	+	.	ID=NZ_PJUS02000362.1:1..2975;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000362.1	RefSeq	pseudogene	1	415	.	-	.	ID=gene-CYJ00_RS10940;Name=CYJ00_RS10940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10940;old_locus_tag=CYJ00_010945;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000362.1	Protein Homology	CDS	1	415	.	-	0	ID=cds-CYJ00_RS10940;Parent=gene-CYJ00_RS10940;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728992.1;locus_tag=CYJ00_RS10940;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000362.1	RefSeq	gene	615	2768	.	-	.	ID=gene-CYJ00_RS10945;Name=CYJ00_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10945;old_locus_tag=CYJ00_010950
NZ_PJUS02000362.1	Protein Homology	CDS	615	2768	.	-	0	ID=cds-WP_063284589.1;Parent=gene-CYJ00_RS10945;Dbxref=GenBank:WP_063284589.1;Name=WP_063284589.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614183.1;locus_tag=CYJ00_RS10945;product=penicillin-binding protein;protein_id=WP_063284589.1;transl_table=11
NZ_PJUS02000362.1	RefSeq	gene	2749	2975	.	-	.	ID=gene-CYJ00_RS10950;Name=ftsL;end_range=2975,.;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CYJ00_RS10950;old_locus_tag=CYJ00_010955;partial=true
NZ_PJUS02000362.1	Protein Homology	CDS	2749	2975	.	-	2	ID=cds-WP_101457947.1;Parent=gene-CYJ00_RS10950;Dbxref=GenBank:WP_101457947.1;Name=WP_101457947.1;Ontology_term=GO:0000910,GO:0016020;end_range=2975,.;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499686.1;locus_tag=CYJ00_RS10950;partial=true;product=cell division protein FtsL;protein_id=WP_101457947.1;transl_table=11
##sequence-region NZ_PJUS02000279.1 1 3368
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000279.1	RefSeq	region	1	3368	.	+	.	ID=NZ_PJUS02000279.1:1..3368;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000279.1	RefSeq	gene	138	644	.	-	.	ID=gene-CYJ00_RS07440;Name=CYJ00_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07440;old_locus_tag=CYJ00_007445
NZ_PJUS02000279.1	Protein Homology	CDS	138	644	.	-	0	ID=cds-WP_063279083.1;Parent=gene-CYJ00_RS07440;Dbxref=GenBank:WP_063279083.1;Name=WP_063279083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728896.1;locus_tag=CYJ00_RS07440;product=2'-5' RNA ligase family protein;protein_id=WP_063279083.1;transl_table=11
NZ_PJUS02000279.1	RefSeq	gene	698	1432	.	-	.	ID=gene-CYJ00_RS07445;Name=CYJ00_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07445;old_locus_tag=CYJ00_007450
NZ_PJUS02000279.1	Protein Homology	CDS	698	1432	.	-	0	ID=cds-WP_014614352.1;Parent=gene-CYJ00_RS07445;Dbxref=GenBank:WP_014614352.1;Name=WP_014614352.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728895.1;locus_tag=CYJ00_RS07445;product=esterase family protein;protein_id=WP_014614352.1;transl_table=11
NZ_PJUS02000279.1	RefSeq	gene	1535	3106	.	-	.	ID=gene-CYJ00_RS07450;Name=CYJ00_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07450;old_locus_tag=CYJ00_007455
NZ_PJUS02000279.1	Protein Homology	CDS	1535	3106	.	-	0	ID=cds-WP_063284623.1;Parent=gene-CYJ00_RS07450;Dbxref=GenBank:WP_063284623.1;Name=WP_063284623.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165974.1;locus_tag=CYJ00_RS07450;product=alanine/glycine:cation symporter family protein;protein_id=WP_063284623.1;transl_table=11
##sequence-region NZ_PJUS02000188.1 1 23138
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000188.1	RefSeq	region	1	23138	.	+	.	ID=NZ_PJUS02000188.1:1..23138;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000188.1	RefSeq	gene	52	360	.	-	.	ID=gene-CYJ00_RS05095;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05095;old_locus_tag=CYJ00_005100
NZ_PJUS02000188.1	Protein Homology	CDS	52	360	.	-	0	ID=cds-WP_101457688.1;Parent=gene-CYJ00_RS05095;Dbxref=GenBank:WP_101457688.1;Name=WP_101457688.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=CYJ00_RS05095;product=regulatory protein MsaA;protein_id=WP_101457688.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	519	791	.	+	.	ID=gene-CYJ00_RS05100;Name=CYJ00_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05100;old_locus_tag=CYJ00_005105
NZ_PJUS02000188.1	Protein Homology	CDS	519	791	.	+	0	ID=cds-WP_014613943.1;Parent=gene-CYJ00_RS05100;Dbxref=GenBank:WP_014613943.1;Name=WP_014613943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167657.1;locus_tag=CYJ00_RS05100;product=acylphosphatase;protein_id=WP_014613943.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	804	1442	.	+	.	ID=gene-CYJ00_RS05105;Name=CYJ00_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05105;old_locus_tag=CYJ00_005110
NZ_PJUS02000188.1	Protein Homology	CDS	804	1442	.	+	0	ID=cds-WP_014613942.1;Parent=gene-CYJ00_RS05105;Dbxref=GenBank:WP_014613942.1;Name=WP_014613942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165344.1;locus_tag=CYJ00_RS05105;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_014613942.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	1439	2605	.	+	.	ID=gene-CYJ00_RS05110;Name=CYJ00_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05110;old_locus_tag=CYJ00_005115
NZ_PJUS02000188.1	Protein Homology	CDS	1439	2605	.	+	0	ID=cds-WP_037543062.1;Parent=gene-CYJ00_RS05110;Dbxref=GenBank:WP_037543062.1;Name=WP_037543062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613941.1;locus_tag=CYJ00_RS05110;product=toxic anion resistance protein;protein_id=WP_037543062.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	2651	2794	.	-	.	ID=gene-CYJ00_RS13900;Name=CYJ00_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13900
NZ_PJUS02000188.1	GeneMarkS-2+	CDS	2651	2794	.	-	0	ID=cds-WP_015729111.1;Parent=gene-CYJ00_RS13900;Dbxref=GenBank:WP_015729111.1;Name=WP_015729111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13900;product=hypothetical protein;protein_id=WP_015729111.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	2840	3055	.	-	.	ID=gene-CYJ00_RS13905;Name=CYJ00_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13905
NZ_PJUS02000188.1	Protein Homology	CDS	2840	3055	.	-	0	ID=cds-WP_020219601.1;Parent=gene-CYJ00_RS13905;Dbxref=GenBank:WP_020219601.1;Name=WP_020219601.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ00_RS13905;product=BCCT family transporter;protein_id=WP_020219601.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	3071	3268	.	-	.	ID=gene-CYJ00_RS13910;Name=CYJ00_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13910
NZ_PJUS02000188.1	Protein Homology	CDS	3071	3268	.	-	0	ID=cds-WP_110159113.1;Parent=gene-CYJ00_RS13910;Dbxref=GenBank:WP_110159113.1;Name=WP_110159113.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ00_RS13910;product=BCCT family transporter;protein_id=WP_110159113.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	3412	4758	.	-	.	ID=gene-CYJ00_RS05120;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=CYJ00_RS05120;old_locus_tag=CYJ00_005125
NZ_PJUS02000188.1	Protein Homology	CDS	3412	4758	.	-	0	ID=cds-WP_015729113.1;Parent=gene-CYJ00_RS05120;Dbxref=GenBank:WP_015729113.1;Name=WP_015729113.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CYJ00_RS05120;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_015729113.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	4876	6765	.	-	.	ID=gene-CYJ00_RS05125;Name=CYJ00_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05125;old_locus_tag=CYJ00_005130
NZ_PJUS02000188.1	Protein Homology	CDS	4876	6765	.	-	0	ID=cds-WP_096538231.1;Parent=gene-CYJ00_RS05125;Dbxref=GenBank:WP_096538231.1;Name=WP_096538231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729114.1;locus_tag=CYJ00_RS05125;product=vWA domain-containing protein;protein_id=WP_096538231.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	6777	7574	.	-	.	ID=gene-CYJ00_RS05130;Name=CYJ00_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05130;old_locus_tag=CYJ00_005135
NZ_PJUS02000188.1	Protein Homology	CDS	6777	7574	.	-	0	ID=cds-WP_014613938.1;Parent=gene-CYJ00_RS05130;Dbxref=GenBank:WP_014613938.1;Name=WP_014613938.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=CYJ00_RS05130;product=ATP-binding protein;protein_id=WP_014613938.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	7672	7875	.	-	.	ID=gene-CYJ00_RS05135;Name=CYJ00_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05135;old_locus_tag=CYJ00_005140
NZ_PJUS02000188.1	Protein Homology	CDS	7672	7875	.	-	0	ID=cds-WP_014613937.1;Parent=gene-CYJ00_RS05135;Dbxref=GenBank:WP_014613937.1;Name=WP_014613937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=CYJ00_RS05135;product=DUF6501 family protein;protein_id=WP_014613937.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	7879	8703	.	-	.	ID=gene-CYJ00_RS05140;Name=CYJ00_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05140;old_locus_tag=CYJ00_005145
NZ_PJUS02000188.1	Protein Homology	CDS	7879	8703	.	-	0	ID=cds-WP_101457689.1;Parent=gene-CYJ00_RS05140;Dbxref=GenBank:WP_101457689.1;Name=WP_101457689.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613936.1;locus_tag=CYJ00_RS05140;product=VOC family protein;protein_id=WP_101457689.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	8768	9007	.	-	.	ID=gene-CYJ00_RS05145;Name=CYJ00_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05145;old_locus_tag=CYJ00_005150
NZ_PJUS02000188.1	Protein Homology	CDS	8768	9007	.	-	0	ID=cds-WP_063278734.1;Parent=gene-CYJ00_RS05145;Dbxref=GenBank:WP_063278734.1;Name=WP_063278734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219603.1;locus_tag=CYJ00_RS05145;product=hypothetical protein;protein_id=WP_063278734.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	9206	10483	.	-	.	ID=gene-CYJ00_RS05150;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05150;old_locus_tag=CYJ00_005155
NZ_PJUS02000188.1	Protein Homology	CDS	9206	10483	.	-	0	ID=cds-WP_015729116.1;Parent=gene-CYJ00_RS05150;Dbxref=GenBank:WP_015729116.1;Name=WP_015729116.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729116.1;locus_tag=CYJ00_RS05150;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_015729116.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	10498	13284	.	-	.	ID=gene-CYJ00_RS05155;Name=CYJ00_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05155;old_locus_tag=CYJ00_005160
NZ_PJUS02000188.1	Protein Homology	CDS	10498	13284	.	-	0	ID=cds-WP_063278735.1;Parent=gene-CYJ00_RS05155;Dbxref=GenBank:WP_063278735.1;Name=WP_063278735.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=CYJ00_RS05155;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_063278735.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	13379	14746	.	-	.	ID=gene-CYJ00_RS05160;Name=CYJ00_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05160;old_locus_tag=CYJ00_005165
NZ_PJUS02000188.1	Protein Homology	CDS	13379	14746	.	-	0	ID=cds-WP_015729118.1;Parent=gene-CYJ00_RS05160;Dbxref=GenBank:WP_015729118.1;Name=WP_015729118.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729118.1;locus_tag=CYJ00_RS05160;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_015729118.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	14743	15420	.	-	.	ID=gene-CYJ00_RS05165;Name=CYJ00_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05165;old_locus_tag=CYJ00_005170
NZ_PJUS02000188.1	Protein Homology	CDS	14743	15420	.	-	0	ID=cds-WP_014613931.1;Parent=gene-CYJ00_RS05165;Dbxref=GenBank:WP_014613931.1;Name=WP_014613931.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=CYJ00_RS05165;product=response regulator transcription factor;protein_id=WP_014613931.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	15916	16539	.	-	.	ID=gene-CYJ00_RS05170;Name=CYJ00_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05170;old_locus_tag=CYJ00_005175
NZ_PJUS02000188.1	Protein Homology	CDS	15916	16539	.	-	0	ID=cds-WP_101457690.1;Parent=gene-CYJ00_RS05170;Dbxref=GenBank:WP_101457690.1;Name=WP_101457690.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729119.1;locus_tag=CYJ00_RS05170;product=phosphatase PAP2 family protein;protein_id=WP_101457690.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	16536	17621	.	-	.	ID=gene-CYJ00_RS05175;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CYJ00_RS05175;old_locus_tag=CYJ00_005180
NZ_PJUS02000188.1	Protein Homology	CDS	16536	17621	.	-	0	ID=cds-WP_015729120.1;Parent=gene-CYJ00_RS05175;Dbxref=GenBank:WP_015729120.1;Name=WP_015729120.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729120.1;locus_tag=CYJ00_RS05175;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_015729120.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	17631	18146	.	-	.	ID=gene-CYJ00_RS05180;Name=CYJ00_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05180;old_locus_tag=CYJ00_005185
NZ_PJUS02000188.1	Protein Homology	CDS	17631	18146	.	-	0	ID=cds-WP_020219604.1;Parent=gene-CYJ00_RS05180;Dbxref=GenBank:WP_020219604.1;Name=WP_020219604.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167642.1;locus_tag=CYJ00_RS05180;product=GNAT family N-acetyltransferase;protein_id=WP_020219604.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	18146	19603	.	-	.	ID=gene-CYJ00_RS05185;Name=CYJ00_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05185;old_locus_tag=CYJ00_005190
NZ_PJUS02000188.1	Protein Homology	CDS	18146	19603	.	-	0	ID=cds-WP_051144749.1;Parent=gene-CYJ00_RS05185;Dbxref=GenBank:WP_051144749.1;Name=WP_051144749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342169.1;locus_tag=CYJ00_RS05185;product=S41 family peptidase;protein_id=WP_051144749.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	19726	19947	.	-	.	ID=gene-CYJ00_RS05190;Name=CYJ00_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05190;old_locus_tag=CYJ00_005195
NZ_PJUS02000188.1	Protein Homology	CDS	19726	19947	.	-	0	ID=cds-WP_014613926.1;Parent=gene-CYJ00_RS05190;Dbxref=GenBank:WP_014613926.1;Name=WP_014613926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=CYJ00_RS05190;product=YozE family protein;protein_id=WP_014613926.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	19947	20447	.	-	.	ID=gene-CYJ00_RS05195;Name=CYJ00_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05195;old_locus_tag=CYJ00_005200
NZ_PJUS02000188.1	Protein Homology	CDS	19947	20447	.	-	0	ID=cds-WP_014613925.1;Parent=gene-CYJ00_RS05195;Dbxref=GenBank:WP_014613925.1;Name=WP_014613925.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=CYJ00_RS05195;product=PTS sugar transporter subunit IIA;protein_id=WP_014613925.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	20461	20889	.	-	.	ID=gene-CYJ00_RS05200;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05200;old_locus_tag=CYJ00_005205
NZ_PJUS02000188.1	Protein Homology	CDS	20461	20889	.	-	0	ID=cds-WP_014613924.1;Parent=gene-CYJ00_RS05200;Dbxref=GenBank:WP_014613924.1;Name=WP_014613924.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=CYJ00_RS05200;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_014613924.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	20886	21410	.	-	.	ID=gene-CYJ00_RS05205;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05205;old_locus_tag=CYJ00_005210
NZ_PJUS02000188.1	Protein Homology	CDS	20886	21410	.	-	0	ID=cds-WP_015729123.1;Parent=gene-CYJ00_RS05205;Dbxref=GenBank:WP_015729123.1;Name=WP_015729123.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165326.1;locus_tag=CYJ00_RS05205;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_015729123.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	21428	22282	.	-	.	ID=gene-CYJ00_RS05210;Name=CYJ00_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05210;old_locus_tag=CYJ00_005215
NZ_PJUS02000188.1	Protein Homology	CDS	21428	22282	.	-	0	ID=cds-WP_014613922.1;Parent=gene-CYJ00_RS05210;Dbxref=GenBank:WP_014613922.1;Name=WP_014613922.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=CYJ00_RS05210;product=DegV family protein;protein_id=WP_014613922.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	22301	22780	.	-	.	ID=gene-CYJ00_RS05215;Name=CYJ00_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05215;old_locus_tag=CYJ00_005220
NZ_PJUS02000188.1	Protein Homology	CDS	22301	22780	.	-	0	ID=cds-WP_015729124.1;Parent=gene-CYJ00_RS05215;Dbxref=GenBank:WP_015729124.1;Name=WP_015729124.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=CYJ00_RS05215;product=dihydrofolate reductase;protein_id=WP_015729124.1;transl_table=11
NZ_PJUS02000188.1	RefSeq	gene	22799	23138	.	-	.	ID=gene-CYJ00_RS05220;Name=thyA;end_range=23138,.;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05220;old_locus_tag=CYJ00_005225;partial=true
NZ_PJUS02000188.1	Protein Homology	CDS	22799	23138	.	-	1	ID=cds-WP_101457691.1;Parent=gene-CYJ00_RS05220;Dbxref=GenBank:WP_101457691.1;Name=WP_101457691.1;Ontology_term=GO:0006231,GO:0004799;end_range=23138,.;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=CYJ00_RS05220;partial=true;product=thymidylate synthase;protein_id=WP_101457691.1;transl_table=11
##sequence-region NZ_PJUS02000174.1 1 3233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000174.1	RefSeq	region	1	3233	.	+	.	ID=NZ_PJUS02000174.1:1..3233;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000174.1	RefSeq	gene	36	944	.	+	.	ID=gene-CYJ00_RS04850;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS04850;old_locus_tag=CYJ00_004855
NZ_PJUS02000174.1	Protein Homology	CDS	36	944	.	+	0	ID=cds-WP_014614493.1;Parent=gene-CYJ00_RS04850;Dbxref=GenBank:WP_014614493.1;Name=WP_014614493.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219570.1;locus_tag=CYJ00_RS04850;product=RNase adapter RapZ;protein_id=WP_014614493.1;transl_table=11
NZ_PJUS02000174.1	RefSeq	gene	946	1941	.	+	.	ID=gene-CYJ00_RS04855;Name=CYJ00_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04855;old_locus_tag=CYJ00_004860
NZ_PJUS02000174.1	Protein Homology	CDS	946	1941	.	+	0	ID=cds-WP_015728762.1;Parent=gene-CYJ00_RS04855;Dbxref=GenBank:WP_015728762.1;Name=WP_015728762.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=CYJ00_RS04855;product=gluconeogenesis factor YvcK family protein;protein_id=WP_015728762.1;transl_table=11
NZ_PJUS02000174.1	RefSeq	gene	1988	2932	.	+	.	ID=gene-CYJ00_RS04860;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04860;old_locus_tag=CYJ00_004865
NZ_PJUS02000174.1	Protein Homology	CDS	1988	2932	.	+	0	ID=cds-WP_014614491.1;Parent=gene-CYJ00_RS04860;Dbxref=GenBank:WP_014614491.1;Name=WP_014614491.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=CYJ00_RS04860;product=DNA-binding protein WhiA;protein_id=WP_014614491.1;transl_table=11
##sequence-region NZ_PJUS02000055.1 1 3884
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000055.1	RefSeq	region	1	3884	.	+	.	ID=NZ_PJUS02000055.1:1..3884;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000055.1	RefSeq	gene	238	369	.	+	.	ID=gene-CYJ00_RS01530;Name=CYJ00_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01530;old_locus_tag=CYJ00_001530
NZ_PJUS02000055.1	Protein Homology	CDS	238	369	.	+	0	ID=cds-WP_014614190.1;Parent=gene-CYJ00_RS01530;Dbxref=GenBank:WP_014614190.1;Name=WP_014614190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=CYJ00_RS01530;product=beta-class phenol-soluble modulin;protein_id=WP_014614190.1;transl_table=11
NZ_PJUS02000055.1	RefSeq	gene	683	1369	.	+	.	ID=gene-CYJ00_RS01535;Name=CYJ00_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01535;old_locus_tag=CYJ00_001535
NZ_PJUS02000055.1	Protein Homology	CDS	683	1369	.	+	0	ID=cds-WP_014614189.1;Parent=gene-CYJ00_RS01535;Dbxref=GenBank:WP_014614189.1;Name=WP_014614189.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728988.1;locus_tag=CYJ00_RS01535;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_014614189.1;transl_table=11
NZ_PJUS02000055.1	RefSeq	gene	1559	2008	.	-	.	ID=gene-CYJ00_RS01540;Name=CYJ00_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01540;old_locus_tag=CYJ00_001540
NZ_PJUS02000055.1	Protein Homology	CDS	1559	2008	.	-	0	ID=cds-WP_014614188.1;Parent=gene-CYJ00_RS01540;Dbxref=GenBank:WP_014614188.1;Name=WP_014614188.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614188.1;locus_tag=CYJ00_RS01540;product=N-acetyltransferase;protein_id=WP_014614188.1;transl_table=11
NZ_PJUS02000055.1	RefSeq	gene	2140	3753	.	+	.	ID=gene-CYJ00_RS01545;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CYJ00_RS01545;old_locus_tag=CYJ00_001545
NZ_PJUS02000055.1	Protein Homology	CDS	2140	3753	.	+	0	ID=cds-WP_015728989.1;Parent=gene-CYJ00_RS01545;Dbxref=GenBank:WP_015728989.1;Name=WP_015728989.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165669.1;locus_tag=CYJ00_RS01545;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_015728989.1;transl_table=11
##sequence-region NZ_PJUS02000232.1 1 3718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000232.1	RefSeq	region	1	3718	.	+	.	ID=NZ_PJUS02000232.1:1..3718;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000232.1	RefSeq	gene	24	854	.	+	.	ID=gene-CYJ00_RS06365;Name=CYJ00_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06365;old_locus_tag=CYJ00_006370
NZ_PJUS02000232.1	Protein Homology	CDS	24	854	.	+	0	ID=cds-WP_101457948.1;Parent=gene-CYJ00_RS06365;Dbxref=GenBank:WP_101457948.1;Name=WP_101457948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=CYJ00_RS06365;product=VOC family protein;protein_id=WP_101457948.1;transl_table=11
NZ_PJUS02000232.1	RefSeq	gene	900	1544	.	+	.	ID=gene-CYJ00_RS06370;Name=CYJ00_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06370;old_locus_tag=CYJ00_006375
NZ_PJUS02000232.1	Protein Homology	CDS	900	1544	.	+	0	ID=cds-WP_014613141.1;Parent=gene-CYJ00_RS06370;Dbxref=GenBank:WP_014613141.1;Name=WP_014613141.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=CYJ00_RS06370;product=HAD family hydrolase;protein_id=WP_014613141.1;transl_table=11
NZ_PJUS02000232.1	RefSeq	gene	1541	1732	.	+	.	ID=gene-CYJ00_RS06375;Name=CYJ00_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06375;old_locus_tag=CYJ00_006380
NZ_PJUS02000232.1	Protein Homology	CDS	1541	1732	.	+	0	ID=cds-WP_099986788.1;Parent=gene-CYJ00_RS06375;Dbxref=GenBank:WP_099986788.1;Name=WP_099986788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=CYJ00_RS06375;product=hypothetical protein;protein_id=WP_099986788.1;transl_table=11
NZ_PJUS02000232.1	RefSeq	gene	1947	2129	.	-	.	ID=gene-CYJ00_RS06380;Name=CYJ00_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06380;old_locus_tag=CYJ00_006385
NZ_PJUS02000232.1	Protein Homology	CDS	1947	2129	.	-	0	ID=cds-WP_101457949.1;Parent=gene-CYJ00_RS06380;Dbxref=GenBank:WP_101457949.1;Name=WP_101457949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=CYJ00_RS06380;product=hypothetical protein;protein_id=WP_101457949.1;transl_table=11
NZ_PJUS02000232.1	RefSeq	gene	2136	2471	.	-	.	ID=gene-CYJ00_RS06385;Name=CYJ00_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06385;old_locus_tag=CYJ00_006390
NZ_PJUS02000232.1	Protein Homology	CDS	2136	2471	.	-	0	ID=cds-WP_101457950.1;Parent=gene-CYJ00_RS06385;Dbxref=GenBank:WP_101457950.1;Name=WP_101457950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613144.1;locus_tag=CYJ00_RS06385;product=hypothetical protein;protein_id=WP_101457950.1;transl_table=11
NZ_PJUS02000232.1	RefSeq	gene	2559	3401	.	-	.	ID=gene-CYJ00_RS06390;Name=CYJ00_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06390;old_locus_tag=CYJ00_006395
NZ_PJUS02000232.1	Protein Homology	CDS	2559	3401	.	-	0	ID=cds-WP_014613145.1;Parent=gene-CYJ00_RS06390;Dbxref=GenBank:WP_014613145.1;Name=WP_014613145.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=CYJ00_RS06390;product=formate/nitrite transporter family protein;protein_id=WP_014613145.1;transl_table=11
##sequence-region NZ_PJUS02000332.1 1 3539
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000332.1	RefSeq	region	1	3539	.	+	.	ID=NZ_PJUS02000332.1:1..3539;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000332.1	RefSeq	gene	811	1887	.	+	.	ID=gene-CYJ00_RS10270;Name=CYJ00_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10270;old_locus_tag=CYJ00_010280
NZ_PJUS02000332.1	Protein Homology	CDS	811	1887	.	+	0	ID=cds-WP_014613163.1;Parent=gene-CYJ00_RS10270;Dbxref=GenBank:WP_014613163.1;Name=WP_014613163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=CYJ00_RS10270;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_014613163.1;transl_table=11
NZ_PJUS02000332.1	RefSeq	gene	1913	3310	.	+	.	ID=gene-CYJ00_RS10275;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ00_RS10275;old_locus_tag=CYJ00_010285
NZ_PJUS02000332.1	Protein Homology	CDS	1913	3310	.	+	0	ID=cds-WP_101457951.1;Parent=gene-CYJ00_RS10275;Dbxref=GenBank:WP_101457951.1;Name=WP_101457951.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613164.1;locus_tag=CYJ00_RS10275;product=Na+/H+ antiporter NhaC;protein_id=WP_101457951.1;transl_table=11
##sequence-region NZ_PJUS02000166.1 1 3098
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000166.1	RefSeq	region	1	3098	.	+	.	ID=NZ_PJUS02000166.1:1..3098;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000166.1	RefSeq	gene	467	871	.	-	.	ID=gene-CYJ00_RS04695;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04695;old_locus_tag=CYJ00_004700
NZ_PJUS02000166.1	Protein Homology	CDS	467	871	.	-	0	ID=cds-WP_101457952.1;Parent=gene-CYJ00_RS04695;Dbxref=GenBank:WP_101457952.1;Name=WP_101457952.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614694.1;locus_tag=CYJ00_RS04695;product=arsenate reductase (thioredoxin);protein_id=WP_101457952.1;transl_table=11
NZ_PJUS02000166.1	RefSeq	gene	887	2176	.	-	.	ID=gene-CYJ00_RS04700;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04700;old_locus_tag=CYJ00_004705
NZ_PJUS02000166.1	Protein Homology	CDS	887	2176	.	-	0	ID=cds-WP_101457953.1;Parent=gene-CYJ00_RS04700;Dbxref=GenBank:WP_101457953.1;Name=WP_101457953.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304041.1;locus_tag=CYJ00_RS04700;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_101457953.1;transl_table=11
NZ_PJUS02000166.1	RefSeq	gene	2173	2493	.	-	.	ID=gene-CYJ00_RS04705;Name=CYJ00_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04705;old_locus_tag=CYJ00_004710
NZ_PJUS02000166.1	Protein Homology	CDS	2173	2493	.	-	0	ID=cds-WP_100002482.1;Parent=gene-CYJ00_RS04705;Dbxref=GenBank:WP_100002482.1;Name=WP_100002482.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614696.1;locus_tag=CYJ00_RS04705;product=ArsR/SmtB family transcription factor;protein_id=WP_100002482.1;transl_table=11
##sequence-region NZ_PJUS02000285.1 1 3979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000285.1	RefSeq	region	1	3979	.	+	.	ID=NZ_PJUS02000285.1:1..3979;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000285.1	RefSeq	gene	1	566	.	-	.	ID=gene-CYJ00_RS07640;Name=CYJ00_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07640;old_locus_tag=CYJ00_007645;partial=true;start_range=.,1
NZ_PJUS02000285.1	Protein Homology	CDS	1	566	.	-	0	ID=cds-WP_133158339.1;Parent=gene-CYJ00_RS07640;Dbxref=GenBank:WP_133158339.1;Name=WP_133158339.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149257.1;locus_tag=CYJ00_RS07640;partial=true;product=4-hydroxy-tetrahydrodipicolinate synthase family protein;protein_id=WP_133158339.1;start_range=.,1;transl_table=11
NZ_PJUS02000285.1	RefSeq	gene	570	1556	.	-	.	ID=gene-CYJ00_RS07645;Name=CYJ00_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07645;old_locus_tag=CYJ00_007650
NZ_PJUS02000285.1	Protein Homology	CDS	570	1556	.	-	0	ID=cds-WP_014613954.1;Parent=gene-CYJ00_RS07645;Dbxref=GenBank:WP_014613954.1;Name=WP_014613954.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165353.1;locus_tag=CYJ00_RS07645;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_014613954.1;transl_table=11
NZ_PJUS02000285.1	cmsearch	riboswitch	1761	1940	.	-	.	ID=id-NZ_PJUS02000285.1:1761..1940;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000285.1	RefSeq	gene	2197	3807	.	-	.	ID=gene-CYJ00_RS07650;Name=CYJ00_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07650;old_locus_tag=CYJ00_007655
NZ_PJUS02000285.1	Protein Homology	CDS	2197	3807	.	-	0	ID=cds-WP_014613955.1;Parent=gene-CYJ00_RS07650;Dbxref=GenBank:WP_014613955.1;Name=WP_014613955.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=CYJ00_RS07650;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_014613955.1;transl_table=11
##sequence-region NZ_PJUS02000402.1 1 3143
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000402.1	RefSeq	region	1	3143	.	+	.	ID=NZ_PJUS02000402.1:1..3143;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000402.1	RefSeq	gene	67	240	.	+	.	ID=gene-CYJ00_RS13380;Name=CYJ00_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13380
NZ_PJUS02000402.1	Protein Homology	CDS	67	240	.	+	0	ID=cds-WP_014613437.1;Parent=gene-CYJ00_RS13380;Dbxref=GenBank:WP_014613437.1;Name=WP_014613437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613437.1;locus_tag=CYJ00_RS13380;product=hypothetical protein;protein_id=WP_014613437.1;transl_table=11
NZ_PJUS02000402.1	RefSeq	gene	459	1508	.	+	.	ID=gene-CYJ00_RS11815;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=CYJ00_RS11815;old_locus_tag=CYJ00_011820
NZ_PJUS02000402.1	Protein Homology	CDS	459	1508	.	+	0	ID=cds-WP_101457954.1;Parent=gene-CYJ00_RS11815;Dbxref=GenBank:WP_101457954.1;Name=WP_101457954.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169327.1;locus_tag=CYJ00_RS11815;product=6-phosphogluconolactonase;protein_id=WP_101457954.1;transl_table=11
NZ_PJUS02000402.1	RefSeq	gene	1615	2994	.	-	.	ID=gene-CYJ00_RS11820;Name=CYJ00_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11820;old_locus_tag=CYJ00_011825
NZ_PJUS02000402.1	Protein Homology	CDS	1615	2994	.	-	0	ID=cds-WP_014613439.1;Parent=gene-CYJ00_RS11820;Dbxref=GenBank:WP_014613439.1;Name=WP_014613439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219898.1;locus_tag=CYJ00_RS11820;product=aldehyde dehydrogenase;protein_id=WP_014613439.1;transl_table=11
##sequence-region NZ_PJUS02000057.1 1 3365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000057.1	RefSeq	region	1	3365	.	+	.	ID=NZ_PJUS02000057.1:1..3365;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000057.1	RefSeq	gene	121	1062	.	+	.	ID=gene-CYJ00_RS01640;Name=CYJ00_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01640;old_locus_tag=CYJ00_001640
NZ_PJUS02000057.1	Protein Homology	CDS	121	1062	.	+	0	ID=cds-WP_100006504.1;Parent=gene-CYJ00_RS01640;Dbxref=GenBank:WP_100006504.1;Name=WP_100006504.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CYJ00_RS01640;product=beta-ketoacyl-ACP synthase III;protein_id=WP_100006504.1;transl_table=11
NZ_PJUS02000057.1	RefSeq	gene	1081	2325	.	+	.	ID=gene-CYJ00_RS01645;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CYJ00_RS01645;old_locus_tag=CYJ00_001645
NZ_PJUS02000057.1	Protein Homology	CDS	1081	2325	.	+	0	ID=cds-WP_101457955.1;Parent=gene-CYJ00_RS01645;Dbxref=GenBank:WP_101457955.1;Name=WP_101457955.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=CYJ00_RS01645;product=beta-ketoacyl-ACP synthase II;protein_id=WP_101457955.1;transl_table=11
NZ_PJUS02000057.1	RefSeq	gene	2805	3182	.	-	.	ID=gene-CYJ00_RS01650;Name=CYJ00_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01650;old_locus_tag=CYJ00_001650
NZ_PJUS02000057.1	Protein Homology	CDS	2805	3182	.	-	0	ID=cds-WP_014614381.1;Parent=gene-CYJ00_RS01650;Dbxref=GenBank:WP_014614381.1;Name=WP_014614381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614381.1;locus_tag=CYJ00_RS01650;product=DUF3899 domain-containing protein;protein_id=WP_014614381.1;transl_table=11
##sequence-region NZ_PJUS02000179.1 1 3580
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000179.1	RefSeq	region	1	3580	.	+	.	ID=NZ_PJUS02000179.1:1..3580;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000179.1	RefSeq	gene	243	1160	.	-	.	ID=gene-CYJ00_RS04965;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04965;old_locus_tag=CYJ00_004970
NZ_PJUS02000179.1	Protein Homology	CDS	243	1160	.	-	0	ID=cds-WP_172635615.1;Parent=gene-CYJ00_RS04965;Dbxref=GenBank:WP_172635615.1;Name=WP_172635615.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511052.1;locus_tag=CYJ00_RS04965;product=homoserine kinase;protein_id=WP_172635615.1;transl_table=11
NZ_PJUS02000179.1	RefSeq	gene	1160	2224	.	-	.	ID=gene-CYJ00_RS04970;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04970;old_locus_tag=CYJ00_004975
NZ_PJUS02000179.1	Protein Homology	CDS	1160	2224	.	-	0	ID=cds-WP_014613999.1;Parent=gene-CYJ00_RS04970;Dbxref=GenBank:WP_014613999.1;Name=WP_014613999.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=CYJ00_RS04970;product=threonine synthase;protein_id=WP_014613999.1;transl_table=11
NZ_PJUS02000179.1	RefSeq	gene	2230	3513	.	-	.	ID=gene-CYJ00_RS04975;Name=CYJ00_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04975;old_locus_tag=CYJ00_004980
NZ_PJUS02000179.1	Protein Homology	CDS	2230	3513	.	-	0	ID=cds-WP_015729079.1;Parent=gene-CYJ00_RS04975;Dbxref=GenBank:WP_015729079.1;Name=WP_015729079.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457511.1;locus_tag=CYJ00_RS04975;product=homoserine dehydrogenase;protein_id=WP_015729079.1;transl_table=11
##sequence-region NZ_PJUS02000325.1 1 2874
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000325.1	RefSeq	region	1	2874	.	+	.	ID=NZ_PJUS02000325.1:1..2874;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000325.1	RefSeq	gene	31	630	.	-	.	ID=gene-CYJ00_RS08705;Name=CYJ00_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08705;old_locus_tag=CYJ00_008710
NZ_PJUS02000325.1	Protein Homology	CDS	31	630	.	-	0	ID=cds-WP_037543793.1;Parent=gene-CYJ00_RS08705;Dbxref=GenBank:WP_037543793.1;Name=WP_037543793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614551.1;locus_tag=CYJ00_RS08705;product=hypothetical protein;protein_id=WP_037543793.1;transl_table=11
NZ_PJUS02000325.1	RefSeq	gene	778	1491	.	-	.	ID=gene-CYJ00_RS08710;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CYJ00_RS08710;old_locus_tag=CYJ00_008715
NZ_PJUS02000325.1	Protein Homology	CDS	778	1491	.	-	0	ID=cds-WP_014614550.1;Parent=gene-CYJ00_RS08710;Dbxref=GenBank:WP_014614550.1;Name=WP_014614550.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445901.1;locus_tag=CYJ00_RS08710;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_014614550.1;transl_table=11
NZ_PJUS02000325.1	RefSeq	gene	1484	1915	.	-	.	ID=gene-CYJ00_RS08715;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CYJ00_RS08715;old_locus_tag=CYJ00_008720
NZ_PJUS02000325.1	Protein Homology	CDS	1484	1915	.	-	0	ID=cds-WP_101457956.1;Parent=gene-CYJ00_RS08715;Dbxref=GenBank:WP_101457956.1;Name=WP_101457956.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=CYJ00_RS08715;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_101457956.1;transl_table=11
NZ_PJUS02000325.1	RefSeq	gene	1915	2583	.	-	.	ID=gene-CYJ00_RS08720;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CYJ00_RS08720;old_locus_tag=CYJ00_008725
NZ_PJUS02000325.1	Protein Homology	CDS	1915	2583	.	-	0	ID=cds-WP_014614548.1;Parent=gene-CYJ00_RS08720;Dbxref=GenBank:WP_014614548.1;Name=WP_014614548.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166155.1;locus_tag=CYJ00_RS08720;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_014614548.1;transl_table=11
##sequence-region NZ_PJUS02000096.1 1 18664
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000096.1	RefSeq	region	1	18664	.	+	.	ID=NZ_PJUS02000096.1:1..18664;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000096.1	RefSeq	gene	1	313	.	+	.	ID=gene-CYJ00_RS02505;Name=CYJ00_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02505;old_locus_tag=CYJ00_002505;partial=true;start_range=.,1
NZ_PJUS02000096.1	GeneMarkS-2+	CDS	1	313	.	+	1	ID=cds-WP_241956933.1;Parent=gene-CYJ00_RS02505;Dbxref=GenBank:WP_241956933.1;Name=WP_241956933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS02505;partial=true;product=hypothetical protein;protein_id=WP_241956933.1;start_range=.,1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	575	1741	.	+	.	ID=gene-CYJ00_RS02510;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CYJ00_RS02510;old_locus_tag=CYJ00_002510
NZ_PJUS02000096.1	Protein Homology	CDS	575	1741	.	+	0	ID=cds-WP_063278813.1;Parent=gene-CYJ00_RS02510;Dbxref=GenBank:WP_063278813.1;Name=WP_063278813.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CYJ00_RS02510;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_063278813.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	1763	2668	.	+	.	ID=gene-CYJ00_RS02515;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CYJ00_RS02515;old_locus_tag=CYJ00_002515
NZ_PJUS02000096.1	Protein Homology	CDS	1763	2668	.	+	0	ID=cds-WP_014614090.1;Parent=gene-CYJ00_RS02515;Dbxref=GenBank:WP_014614090.1;Name=WP_014614090.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167870.1;locus_tag=CYJ00_RS02515;product=succinate--CoA ligase subunit alpha;protein_id=WP_014614090.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	2907	3794	.	+	.	ID=gene-CYJ00_RS02520;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02520;old_locus_tag=CYJ00_002520
NZ_PJUS02000096.1	Protein Homology	CDS	2907	3794	.	+	0	ID=cds-WP_063278812.1;Parent=gene-CYJ00_RS02520;Dbxref=GenBank:WP_063278812.1;Name=WP_063278812.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614089.1;locus_tag=CYJ00_RS02520;product=DNA-processing protein DprA;protein_id=WP_063278812.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	3878	5947	.	+	.	ID=gene-CYJ00_RS02525;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02525;old_locus_tag=CYJ00_002525
NZ_PJUS02000096.1	Protein Homology	CDS	3878	5947	.	+	0	ID=cds-WP_014614088.1;Parent=gene-CYJ00_RS02525;Dbxref=GenBank:WP_014614088.1;Name=WP_014614088.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CYJ00_RS02525;product=type I DNA topoisomerase;protein_id=WP_014614088.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	5975	7279	.	+	.	ID=gene-CYJ00_RS02530;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CYJ00_RS02530;old_locus_tag=CYJ00_002530
NZ_PJUS02000096.1	Protein Homology	CDS	5975	7279	.	+	0	ID=cds-WP_015729042.1;Parent=gene-CYJ00_RS02530;Dbxref=GenBank:WP_015729042.1;Name=WP_015729042.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=CYJ00_RS02530;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_015729042.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	7379	8290	.	+	.	ID=gene-CYJ00_RS02535;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CYJ00_RS02535;old_locus_tag=CYJ00_002535
NZ_PJUS02000096.1	Protein Homology	CDS	7379	8290	.	+	0	ID=cds-WP_015729043.1;Parent=gene-CYJ00_RS02535;Dbxref=GenBank:WP_015729043.1;Name=WP_015729043.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729043.1;locus_tag=CYJ00_RS02535;product=tyrosine recombinase XerC;protein_id=WP_015729043.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	8297	8839	.	+	.	ID=gene-CYJ00_RS02540;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CYJ00_RS02540;old_locus_tag=CYJ00_002540
NZ_PJUS02000096.1	Protein Homology	CDS	8297	8839	.	+	0	ID=cds-WP_014614085.1;Parent=gene-CYJ00_RS02540;Dbxref=GenBank:WP_014614085.1;Name=WP_014614085.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=CYJ00_RS02540;product=ATP-dependent protease subunit HslV;protein_id=WP_014614085.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	8854	10263	.	+	.	ID=gene-CYJ00_RS02545;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CYJ00_RS02545;old_locus_tag=CYJ00_002545
NZ_PJUS02000096.1	Protein Homology	CDS	8854	10263	.	+	0	ID=cds-WP_014614084.1;Parent=gene-CYJ00_RS02545;Dbxref=GenBank:WP_014614084.1;Name=WP_014614084.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275946.1;locus_tag=CYJ00_RS02545;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_014614084.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	10283	11056	.	+	.	ID=gene-CYJ00_RS02550;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=CYJ00_RS02550;old_locus_tag=CYJ00_002550
NZ_PJUS02000096.1	Protein Homology	CDS	10283	11056	.	+	0	ID=cds-WP_014614083.1;Parent=gene-CYJ00_RS02550;Dbxref=GenBank:WP_014614083.1;Name=WP_014614083.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=CYJ00_RS02550;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_014614083.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	11223	12020	.	+	.	ID=gene-CYJ00_RS02555;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02555;old_locus_tag=CYJ00_002555
NZ_PJUS02000096.1	Protein Homology	CDS	11223	12020	.	+	0	ID=cds-WP_014614082.1;Parent=gene-CYJ00_RS02555;Dbxref=GenBank:WP_014614082.1;Name=WP_014614082.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=CYJ00_RS02555;product=30S ribosomal protein S2;protein_id=WP_014614082.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	12110	12988	.	+	.	ID=gene-CYJ00_RS02560;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CYJ00_RS02560;old_locus_tag=CYJ00_002560
NZ_PJUS02000096.1	Protein Homology	CDS	12110	12988	.	+	0	ID=cds-WP_014614081.1;Parent=gene-CYJ00_RS02560;Dbxref=GenBank:WP_014614081.1;Name=WP_014614081.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CYJ00_RS02560;product=translation elongation factor Ts;protein_id=WP_014614081.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	13140	13862	.	+	.	ID=gene-CYJ00_RS02565;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CYJ00_RS02565;old_locus_tag=CYJ00_002565
NZ_PJUS02000096.1	Protein Homology	CDS	13140	13862	.	+	0	ID=cds-WP_014614080.1;Parent=gene-CYJ00_RS02565;Dbxref=GenBank:WP_014614080.1;Name=WP_014614080.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CYJ00_RS02565;product=UMP kinase;protein_id=WP_014614080.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	13880	14434	.	+	.	ID=gene-CYJ00_RS02570;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CYJ00_RS02570;old_locus_tag=CYJ00_002570
NZ_PJUS02000096.1	Protein Homology	CDS	13880	14434	.	+	0	ID=cds-WP_063284340.1;Parent=gene-CYJ00_RS02570;Dbxref=GenBank:WP_063284340.1;Name=WP_063284340.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CYJ00_RS02570;product=ribosome recycling factor;protein_id=WP_063284340.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	14678	15439	.	+	.	ID=gene-CYJ00_RS02575;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=CYJ00_RS02575;old_locus_tag=CYJ00_002575
NZ_PJUS02000096.1	Protein Homology	CDS	14678	15439	.	+	0	ID=cds-WP_063278811.1;Parent=gene-CYJ00_RS02575;Dbxref=GenBank:WP_063278811.1;Name=WP_063278811.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=CYJ00_RS02575;product=undecaprenyl pyrophosphate synthase;protein_id=WP_063278811.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	15454	16236	.	+	.	ID=gene-CYJ00_RS02580;Name=CYJ00_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02580;old_locus_tag=CYJ00_002580
NZ_PJUS02000096.1	Protein Homology	CDS	15454	16236	.	+	0	ID=cds-WP_014614077.1;Parent=gene-CYJ00_RS02580;Dbxref=GenBank:WP_014614077.1;Name=WP_014614077.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=CYJ00_RS02580;product=phosphatidate cytidylyltransferase;protein_id=WP_014614077.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	16253	17383	.	+	.	ID=gene-CYJ00_RS02585;Name=CYJ00_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02585;old_locus_tag=CYJ00_002585
NZ_PJUS02000096.1	Protein Homology	CDS	16253	17383	.	+	0	ID=cds-WP_014614076.1;Parent=gene-CYJ00_RS02585;Dbxref=GenBank:WP_014614076.1;Name=WP_014614076.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016910764.1;locus_tag=CYJ00_RS02585;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_014614076.1;transl_table=11
NZ_PJUS02000096.1	RefSeq	gene	17390	18664	.	+	.	ID=gene-CYJ00_RS02590;Name=rseP;end_range=18664,.;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CYJ00_RS02590;old_locus_tag=CYJ00_002590;partial=true
NZ_PJUS02000096.1	Protein Homology	CDS	17390	18664	.	+	0	ID=cds-WP_101457692.1;Parent=gene-CYJ00_RS02590;Dbxref=GenBank:WP_101457692.1;Name=WP_101457692.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;end_range=18664,.;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=CYJ00_RS02590;partial=true;product=RIP metalloprotease RseP;protein_id=WP_101457692.1;transl_table=11
##sequence-region NZ_PJUS02000414.1 1 3445
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000414.1	RefSeq	region	1	3445	.	+	.	ID=NZ_PJUS02000414.1:1..3445;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000414.1	RefSeq	gene	1	468	.	-	.	ID=gene-CYJ00_RS12195;Name=CYJ00_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12195;old_locus_tag=CYJ00_012200;partial=true;start_range=.,1
NZ_PJUS02000414.1	Protein Homology	CDS	1	468	.	-	0	ID=cds-WP_133158360.1;Parent=gene-CYJ00_RS12195;Dbxref=GenBank:WP_133158360.1;Name=WP_133158360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492615.1;locus_tag=CYJ00_RS12195;partial=true;product=MBL fold metallo-hydrolase;protein_id=WP_133158360.1;start_range=.,1;transl_table=11
NZ_PJUS02000414.1	RefSeq	gene	740	1393	.	-	.	ID=gene-CYJ00_RS12200;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12200;old_locus_tag=CYJ00_012205
NZ_PJUS02000414.1	Protein Homology	CDS	740	1393	.	-	0	ID=cds-WP_015729335.1;Parent=gene-CYJ00_RS12200;Dbxref=GenBank:WP_015729335.1;Name=WP_015729335.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729335.1;locus_tag=CYJ00_RS12200;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_015729335.1;transl_table=11
NZ_PJUS02000414.1	RefSeq	gene	1409	2200	.	-	.	ID=gene-CYJ00_RS12205;Name=CYJ00_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12205;old_locus_tag=CYJ00_012210
NZ_PJUS02000414.1	Protein Homology	CDS	1409	2200	.	-	0	ID=cds-WP_014613619.1;Parent=gene-CYJ00_RS12205;Dbxref=GenBank:WP_014613619.1;Name=WP_014613619.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=CYJ00_RS12205;product=phosphotransferase family protein;protein_id=WP_014613619.1;transl_table=11
NZ_PJUS02000414.1	RefSeq	gene	2433	3281	.	-	.	ID=gene-CYJ00_RS12210;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CYJ00_RS12210;old_locus_tag=CYJ00_012215
NZ_PJUS02000414.1	Protein Homology	CDS	2433	3281	.	-	0	ID=cds-WP_014613618.1;Parent=gene-CYJ00_RS12210;Dbxref=GenBank:WP_014613618.1;Name=WP_014613618.1;Ontology_term=GO:0042853,GO:0046416,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA,D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613618.1;locus_tag=CYJ00_RS12210;product=D-amino-acid transaminase;protein_id=WP_014613618.1;transl_table=11
NZ_PJUS02000414.1	RefSeq	pseudogene	3285	3445	.	-	.	ID=gene-CYJ00_RS12215;Name=CYJ00_RS12215;end_range=3445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12215;old_locus_tag=CYJ00_012220;partial=true;pseudo=true
NZ_PJUS02000414.1	Protein Homology	CDS	3285	3445	.	-	2	ID=cds-CYJ00_RS12215;Parent=gene-CYJ00_RS12215;Note=divalent metal ion-dependent extracellular dipeptidase%3B able to hydrolyze a broad range of dipeptides but no tri-%2C tetra-%2C or larger oligopeptides%3B differences in the amino acid specificity of the cleavage site varies between species%3B similar to succinyl-diaminopimelate desuccinylases%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469670.1;locus_tag=CYJ00_RS12215;partial=true;product=dipeptidase PepV;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000142.1 1 4349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000142.1	RefSeq	region	1	4349	.	+	.	ID=NZ_PJUS02000142.1:1..4349;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000142.1	RefSeq	gene	239	1555	.	+	.	ID=gene-CYJ00_RS03920;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CYJ00_RS03920;old_locus_tag=CYJ00_003925
NZ_PJUS02000142.1	Protein Homology	CDS	239	1555	.	+	0	ID=cds-WP_014613698.1;Parent=gene-CYJ00_RS03920;Dbxref=GenBank:WP_014613698.1;Name=WP_014613698.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=CYJ00_RS03920;product=trigger factor;protein_id=WP_014613698.1;transl_table=11
NZ_PJUS02000142.1	RefSeq	gene	2128	3390	.	+	.	ID=gene-CYJ00_RS03925;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CYJ00_RS03925;old_locus_tag=CYJ00_003930
NZ_PJUS02000142.1	Protein Homology	CDS	2128	3390	.	+	0	ID=cds-WP_065520469.1;Parent=gene-CYJ00_RS03925;Dbxref=GenBank:WP_065520469.1;Name=WP_065520469.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CYJ00_RS03925;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_065520469.1;transl_table=11
NZ_PJUS02000142.1	RefSeq	gene	3627	4223	.	+	.	ID=gene-CYJ00_RS03930;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03930;old_locus_tag=CYJ00_003935
NZ_PJUS02000142.1	Protein Homology	CDS	3627	4223	.	+	0	ID=cds-WP_014613700.1;Parent=gene-CYJ00_RS03930;Dbxref=GenBank:WP_014613700.1;Name=WP_014613700.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729284.1;locus_tag=CYJ00_RS03930;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014613700.1;transl_table=11
##sequence-region NZ_PJUS02000263.1 1 3899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000263.1	RefSeq	region	1	3899	.	+	.	ID=NZ_PJUS02000263.1:1..3899;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000263.1	RefSeq	gene	24	968	.	-	.	ID=gene-CYJ00_RS07120;Name=CYJ00_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07120;old_locus_tag=CYJ00_007125
NZ_PJUS02000263.1	Protein Homology	CDS	24	968	.	-	0	ID=cds-WP_100002596.1;Parent=gene-CYJ00_RS07120;Dbxref=GenBank:WP_100002596.1;Name=WP_100002596.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612934.1;locus_tag=CYJ00_RS07120;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_100002596.1;transl_table=11
NZ_PJUS02000263.1	RefSeq	gene	1973	3460	.	-	.	ID=gene-CYJ00_RS07125;Name=CYJ00_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07125;old_locus_tag=CYJ00_007130
NZ_PJUS02000263.1	Protein Homology	CDS	1973	3460	.	-	0	ID=cds-WP_063284771.1;Parent=gene-CYJ00_RS07125;Dbxref=GenBank:WP_063284771.1;Name=WP_063284771.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=CYJ00_RS07125;product=glycosyltransferase;protein_id=WP_063284771.1;transl_table=11
##sequence-region NZ_PJUS02000115.1 1 2581
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000115.1	RefSeq	region	1	2581	.	+	.	ID=NZ_PJUS02000115.1:1..2581;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000115.1	RefSeq	gene	51	2132	.	+	.	ID=gene-CYJ00_RS03335;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03335;old_locus_tag=CYJ00_003340
NZ_PJUS02000115.1	Protein Homology	CDS	51	2132	.	+	0	ID=cds-WP_014614745.1;Parent=gene-CYJ00_RS03335;Dbxref=GenBank:WP_014614745.1;Name=WP_014614745.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=CYJ00_RS03335;product=elongation factor G;protein_id=WP_014614745.1;transl_table=11
NZ_PJUS02000115.1	RefSeq	gene	2314	2581	.	+	.	ID=gene-CYJ00_RS03340;Name=CYJ00_RS03340;end_range=2581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03340;old_locus_tag=CYJ00_003345;partial=true
NZ_PJUS02000115.1	Protein Homology	CDS	2314	2581	.	+	0	ID=cds-WP_241956935.1;Parent=gene-CYJ00_RS03340;Dbxref=GenBank:WP_241956935.1;Name=WP_241956935.1;Ontology_term=GO:0003924,GO:0005525;end_range=2581,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=CYJ00_RS03340;partial=true;product=GTP-binding protein;protein_id=WP_241956935.1;transl_table=11
##sequence-region NZ_PJUS02000383.1 1 3266
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000383.1	RefSeq	region	1	3266	.	+	.	ID=NZ_PJUS02000383.1:1..3266;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000383.1	RefSeq	gene	229	771	.	-	.	ID=gene-CYJ00_RS11350;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=CYJ00_RS11350;old_locus_tag=CYJ00_011355
NZ_PJUS02000383.1	Protein Homology	CDS	229	771	.	-	0	ID=cds-WP_014613502.1;Parent=gene-CYJ00_RS11350;Dbxref=GenBank:WP_014613502.1;Name=WP_014613502.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CYJ00_RS11350;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_014613502.1;transl_table=11
NZ_PJUS02000383.1	RefSeq	gene	837	1883	.	-	.	ID=gene-CYJ00_RS11355;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CYJ00_RS11355;old_locus_tag=CYJ00_011360
NZ_PJUS02000383.1	Protein Homology	CDS	837	1883	.	-	0	ID=cds-WP_101457957.1;Parent=gene-CYJ00_RS11355;Dbxref=GenBank:WP_101457957.1;Name=WP_101457957.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166479.1;locus_tag=CYJ00_RS11355;product=A/G-specific adenine glycosylase;protein_id=WP_101457957.1;transl_table=11
NZ_PJUS02000383.1	RefSeq	gene	1974	2951	.	+	.	ID=gene-CYJ00_RS11360;Name=CYJ00_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11360;old_locus_tag=CYJ00_011365
NZ_PJUS02000383.1	Protein Homology	CDS	1974	2951	.	+	0	ID=cds-WP_014613500.1;Parent=gene-CYJ00_RS11360;Dbxref=GenBank:WP_014613500.1;Name=WP_014613500.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=CYJ00_RS11360;product=metal-dependent hydrolase;protein_id=WP_014613500.1;transl_table=11
##sequence-region NZ_PJUS02000289.1 1 2778
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000289.1	RefSeq	region	1	2778	.	+	.	ID=NZ_PJUS02000289.1:1..2778;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000289.1	RefSeq	gene	28	1254	.	+	.	ID=gene-CYJ00_RS07685;Name=CYJ00_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07685;old_locus_tag=CYJ00_007690
NZ_PJUS02000289.1	Protein Homology	CDS	28	1254	.	+	0	ID=cds-WP_020220157.1;Parent=gene-CYJ00_RS07685;Dbxref=GenBank:WP_020220157.1;Name=WP_020220157.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=CYJ00_RS07685;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_020220157.1;transl_table=11
NZ_PJUS02000289.1	RefSeq	gene	1728	2561	.	+	.	ID=gene-CYJ00_RS07690;Name=CYJ00_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07690;old_locus_tag=CYJ00_007695
NZ_PJUS02000289.1	Protein Homology	CDS	1728	2561	.	+	0	ID=cds-WP_101457958.1;Parent=gene-CYJ00_RS07690;Dbxref=GenBank:WP_101457958.1;Name=WP_101457958.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=CYJ00_RS07690;product=YitT family protein;protein_id=WP_101457958.1;transl_table=11
##sequence-region NZ_PJUS02000348.1 1 2668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000348.1	RefSeq	region	1	2668	.	+	.	ID=NZ_PJUS02000348.1:1..2668;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000348.1	RefSeq	gene	64	252	.	+	.	ID=gene-CYJ00_RS10625;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10625;old_locus_tag=CYJ00_010630
NZ_PJUS02000348.1	Protein Homology	CDS	64	252	.	+	0	ID=cds-WP_014614133.1;Parent=gene-CYJ00_RS10625;Dbxref=GenBank:WP_014614133.1;Name=WP_014614133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CYJ00_RS10625;product=50S ribosomal protein L28;protein_id=WP_014614133.1;transl_table=11
NZ_PJUS02000348.1	RefSeq	gene	323	964	.	-	.	ID=gene-CYJ00_RS10630;Name=CYJ00_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10630;old_locus_tag=CYJ00_010635
NZ_PJUS02000348.1	Protein Homology	CDS	323	964	.	-	0	ID=cds-WP_063284327.1;Parent=gene-CYJ00_RS10630;Dbxref=GenBank:WP_063284327.1;Name=WP_063284327.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614134.1;locus_tag=CYJ00_RS10630;product=thiamine diphosphokinase;protein_id=WP_063284327.1;transl_table=11
NZ_PJUS02000348.1	RefSeq	gene	964	1614	.	-	.	ID=gene-CYJ00_RS10635;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CYJ00_RS10635;old_locus_tag=CYJ00_010640
NZ_PJUS02000348.1	Protein Homology	CDS	964	1614	.	-	0	ID=cds-WP_014614135.1;Parent=gene-CYJ00_RS10635;Dbxref=GenBank:WP_014614135.1;Name=WP_014614135.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=CYJ00_RS10635;product=ribulose-phosphate 3-epimerase;protein_id=WP_014614135.1;transl_table=11
NZ_PJUS02000348.1	RefSeq	gene	1614	2489	.	-	.	ID=gene-CYJ00_RS10640;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10640;old_locus_tag=CYJ00_010645
NZ_PJUS02000348.1	Protein Homology	CDS	1614	2489	.	-	0	ID=cds-WP_014614136.1;Parent=gene-CYJ00_RS10640;Dbxref=GenBank:WP_014614136.1;Name=WP_014614136.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=CYJ00_RS10640;product=ribosome small subunit-dependent GTPase A;protein_id=WP_014614136.1;transl_table=11
##sequence-region NZ_PJUS02000272.1 1 2735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000272.1	RefSeq	region	1	2735	.	+	.	ID=NZ_PJUS02000272.1:1..2735;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000272.1	RefSeq	pseudogene	1	240	.	+	.	ID=gene-CYJ00_RS13470;Name=CYJ00_RS13470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13470;old_locus_tag=CYJ00_007315;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000272.1	Protein Homology	CDS	1	240	.	+	0	ID=cds-CYJ00_RS13470;Parent=gene-CYJ00_RS13470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614922.1;locus_tag=CYJ00_RS13470;partial=true;product=IgG-binding protein SBI;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000272.1	RefSeq	gene	294	1103	.	-	.	ID=gene-CYJ00_RS07315;Name=CYJ00_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07315;old_locus_tag=CYJ00_007320
NZ_PJUS02000272.1	Protein Homology	CDS	294	1103	.	-	0	ID=cds-WP_037541946.1;Parent=gene-CYJ00_RS07315;Dbxref=GenBank:WP_037541946.1;Name=WP_037541946.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220246.1;locus_tag=CYJ00_RS07315;product=ABC transporter permease subunit;protein_id=WP_037541946.1;transl_table=11
NZ_PJUS02000272.1	RefSeq	gene	1096	2031	.	-	.	ID=gene-CYJ00_RS07320;Name=CYJ00_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07320;old_locus_tag=CYJ00_007325
NZ_PJUS02000272.1	Protein Homology	CDS	1096	2031	.	-	0	ID=cds-WP_014614924.1;Parent=gene-CYJ00_RS07320;Dbxref=GenBank:WP_014614924.1;Name=WP_014614924.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614924.1;locus_tag=CYJ00_RS07320;product=ABC transporter ATP-binding protein;protein_id=WP_014614924.1;transl_table=11
##sequence-region NZ_PJUS02000155.1 1 2968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000155.1	RefSeq	region	1	2968	.	+	.	ID=NZ_PJUS02000155.1:1..2968;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000155.1	RefSeq	gene	155	1045	.	-	.	ID=gene-CYJ00_RS04305;Name=CYJ00_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04305;old_locus_tag=CYJ00_004310
NZ_PJUS02000155.1	Protein Homology	CDS	155	1045	.	-	0	ID=cds-WP_014614179.1;Parent=gene-CYJ00_RS04305;Dbxref=GenBank:WP_014614179.1;Name=WP_014614179.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165664.1;locus_tag=CYJ00_RS04305;product=cell division protein FtsQ/DivIB;protein_id=WP_014614179.1;transl_table=11
NZ_PJUS02000155.1	RefSeq	gene	1061	2410	.	-	.	ID=gene-CYJ00_RS04310;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CYJ00_RS04310;old_locus_tag=CYJ00_004315
NZ_PJUS02000155.1	Protein Homology	CDS	1061	2410	.	-	0	ID=cds-WP_063284591.1;Parent=gene-CYJ00_RS04310;Dbxref=GenBank:WP_063284591.1;Name=WP_063284591.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=CYJ00_RS04310;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_063284591.1;transl_table=11
NZ_PJUS02000155.1	RefSeq	gene	2411	2968	.	-	.	ID=gene-CYJ00_RS04315;Name=mraY;end_range=2968,.;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CYJ00_RS04315;old_locus_tag=CYJ00_004320;partial=true
NZ_PJUS02000155.1	Protein Homology	CDS	2411	2968	.	-	0	ID=cds-WP_101457959.1;Parent=gene-CYJ00_RS04315;Dbxref=GenBank:WP_101457959.1;Name=WP_101457959.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;end_range=2968,.;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276018.1;locus_tag=CYJ00_RS04315;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_101457959.1;transl_table=11
##sequence-region NZ_PJUS02000429.1 1 22212
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000429.1	RefSeq	region	1	22212	.	+	.	ID=NZ_PJUS02000429.1:1..22212;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000429.1	RefSeq	gene	1	663	.	+	.	ID=gene-CYJ00_RS12680;Name=CYJ00_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12680;old_locus_tag=CYJ00_012685;partial=true;start_range=.,1
NZ_PJUS02000429.1	Protein Homology	CDS	1	663	.	+	0	ID=cds-WP_198597701.1;Parent=gene-CYJ00_RS12680;Dbxref=GenBank:WP_198597701.1;Name=WP_198597701.1;Ontology_term=GO:0000027,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CYJ00_RS12680;partial=true;product=ribosome biogenesis GTPase Der;protein_id=WP_198597701.1;start_range=.,1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	679	1677	.	+	.	ID=gene-CYJ00_RS12685;Name=CYJ00_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12685;old_locus_tag=CYJ00_012690
NZ_PJUS02000429.1	Protein Homology	CDS	679	1677	.	+	0	ID=cds-WP_014613884.1;Parent=gene-CYJ00_RS12685;Dbxref=GenBank:WP_014613884.1;Name=WP_014613884.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275732.1;locus_tag=CYJ00_RS12685;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_014613884.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	1848	2120	.	+	.	ID=gene-CYJ00_RS12690;Name=CYJ00_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12690;old_locus_tag=CYJ00_012695
NZ_PJUS02000429.1	Protein Homology	CDS	1848	2120	.	+	0	ID=cds-WP_014613885.1;Parent=gene-CYJ00_RS12690;Dbxref=GenBank:WP_014613885.1;Name=WP_014613885.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CYJ00_RS12690;product=HU family DNA-binding protein;protein_id=WP_014613885.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	2596	3165	.	+	.	ID=gene-CYJ00_RS12695;Name=CYJ00_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12695;old_locus_tag=CYJ00_012700
NZ_PJUS02000429.1	Protein Homology	CDS	2596	3165	.	+	0	ID=cds-WP_014613886.1;Parent=gene-CYJ00_RS12695;Dbxref=GenBank:WP_014613886.1;Name=WP_014613886.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613886.1;locus_tag=CYJ00_RS12695;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_014613886.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	3175	3888	.	+	.	ID=gene-CYJ00_RS12700;Name=CYJ00_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12700;old_locus_tag=CYJ00_012705
NZ_PJUS02000429.1	Protein Homology	CDS	3175	3888	.	+	0	ID=cds-WP_020219613.1;Parent=gene-CYJ00_RS12700;Dbxref=GenBank:WP_020219613.1;Name=WP_020219613.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613887.1;locus_tag=CYJ00_RS12700;product=demethylmenaquinone methyltransferase;protein_id=WP_020219613.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	3906	4862	.	+	.	ID=gene-CYJ00_RS12705;Name=CYJ00_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12705;old_locus_tag=CYJ00_012710
NZ_PJUS02000429.1	Protein Homology	CDS	3906	4862	.	+	0	ID=cds-WP_014613888.1;Parent=gene-CYJ00_RS12705;Dbxref=GenBank:WP_014613888.1;Name=WP_014613888.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=CYJ00_RS12705;product=polyprenyl synthetase family protein;protein_id=WP_014613888.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	4944	5396	.	+	.	ID=gene-CYJ00_RS12710;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CYJ00_RS12710;old_locus_tag=CYJ00_012715
NZ_PJUS02000429.1	Protein Homology	CDS	4944	5396	.	+	0	ID=cds-WP_063284375.1;Parent=gene-CYJ00_RS12710;Dbxref=GenBank:WP_063284375.1;Name=WP_063284375.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165294.1;locus_tag=CYJ00_RS12710;product=nucleoside-diphosphate kinase;protein_id=WP_063284375.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	5675	6841	.	+	.	ID=gene-CYJ00_RS12715;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12715;old_locus_tag=CYJ00_012720
NZ_PJUS02000429.1	Protein Homology	CDS	5675	6841	.	+	0	ID=cds-WP_037544222.1;Parent=gene-CYJ00_RS12715;Dbxref=GenBank:WP_037544222.1;Name=WP_037544222.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=CYJ00_RS12715;product=chorismate synthase;protein_id=WP_037544222.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	6858	7931	.	+	.	ID=gene-CYJ00_RS12720;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12720;old_locus_tag=CYJ00_012725
NZ_PJUS02000429.1	Protein Homology	CDS	6858	7931	.	+	0	ID=cds-WP_014613891.1;Parent=gene-CYJ00_RS12720;Dbxref=GenBank:WP_014613891.1;Name=WP_014613891.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=CYJ00_RS12720;product=3-dehydroquinate synthase;protein_id=WP_014613891.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	7932	9221	.	+	.	ID=gene-CYJ00_RS12725;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12725;old_locus_tag=CYJ00_012730
NZ_PJUS02000429.1	Protein Homology	CDS	7932	9221	.	+	0	ID=cds-WP_014613892.1;Parent=gene-CYJ00_RS12725;Dbxref=GenBank:WP_014613892.1;Name=WP_014613892.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=CYJ00_RS12725;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_014613892.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	9223	10464	.	+	.	ID=gene-CYJ00_RS12730;Name=CYJ00_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12730;old_locus_tag=CYJ00_012735
NZ_PJUS02000429.1	Protein Homology	CDS	9223	10464	.	+	0	ID=cds-WP_014613893.1;Parent=gene-CYJ00_RS12730;Dbxref=GenBank:WP_014613893.1;Name=WP_014613893.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=CYJ00_RS12730;product=tetratricopeptide repeat protein;protein_id=WP_014613893.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	10476	11033	.	+	.	ID=gene-CYJ00_RS12735;Name=CYJ00_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12735;old_locus_tag=CYJ00_012740
NZ_PJUS02000429.1	Protein Homology	CDS	10476	11033	.	+	0	ID=cds-WP_014613894.1;Parent=gene-CYJ00_RS12735;Dbxref=GenBank:WP_014613894.1;Name=WP_014613894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729137.1;locus_tag=CYJ00_RS12735;product=YpiB family protein;protein_id=WP_014613894.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	11062	11655	.	+	.	ID=gene-CYJ00_RS12740;Name=CYJ00_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12740;old_locus_tag=CYJ00_012745
NZ_PJUS02000429.1	Protein Homology	CDS	11062	11655	.	+	0	ID=cds-WP_014613895.1;Parent=gene-CYJ00_RS12740;Dbxref=GenBank:WP_014613895.1;Name=WP_014613895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613895.1;locus_tag=CYJ00_RS12740;product=DUF1405 domain-containing protein;protein_id=WP_014613895.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	11694	12392	.	+	.	ID=gene-CYJ00_RS12745;Name=CYJ00_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12745;old_locus_tag=CYJ00_012750
NZ_PJUS02000429.1	Protein Homology	CDS	11694	12392	.	+	0	ID=cds-WP_014613896.1;Parent=gene-CYJ00_RS12745;Dbxref=GenBank:WP_014613896.1;Name=WP_014613896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613896.1;locus_tag=CYJ00_RS12745;product=zinc metallopeptidase;protein_id=WP_014613896.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	12571	12894	.	+	.	ID=gene-CYJ00_RS12750;Name=CYJ00_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12750;old_locus_tag=CYJ00_012755
NZ_PJUS02000429.1	Protein Homology	CDS	12571	12894	.	+	0	ID=cds-WP_014613897.1;Parent=gene-CYJ00_RS12750;Dbxref=GenBank:WP_014613897.1;Name=WP_014613897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167611.1;locus_tag=CYJ00_RS12750;product=nucleotide pyrophosphohydrolase;protein_id=WP_014613897.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	12910	14034	.	+	.	ID=gene-CYJ00_RS12755;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12755;old_locus_tag=CYJ00_012760
NZ_PJUS02000429.1	Protein Homology	CDS	12910	14034	.	+	0	ID=cds-WP_015729135.1;Parent=gene-CYJ00_RS12755;Dbxref=GenBank:WP_015729135.1;Name=WP_015729135.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165302.1;locus_tag=CYJ00_RS12755;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_015729135.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	14038	15240	.	+	.	ID=gene-CYJ00_RS12760;Name=CYJ00_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12760;old_locus_tag=CYJ00_012765
NZ_PJUS02000429.1	Protein Homology	CDS	14038	15240	.	+	0	ID=cds-WP_101457693.1;Parent=gene-CYJ00_RS12760;Dbxref=GenBank:WP_101457693.1;Name=WP_101457693.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219610.1;locus_tag=CYJ00_RS12760;product=CCA tRNA nucleotidyltransferase;protein_id=WP_101457693.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	15224	16195	.	+	.	ID=gene-CYJ00_RS12765;Name=CYJ00_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12765;old_locus_tag=CYJ00_012770
NZ_PJUS02000429.1	Protein Homology	CDS	15224	16195	.	+	0	ID=cds-WP_015729133.1;Parent=gene-CYJ00_RS12765;Dbxref=GenBank:WP_015729133.1;Name=WP_015729133.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165304.1;locus_tag=CYJ00_RS12765;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_015729133.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	16223	18925	.	+	.	ID=gene-CYJ00_RS12770;Name=CYJ00_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12770;old_locus_tag=CYJ00_012775
NZ_PJUS02000429.1	Protein Homology	CDS	16223	18925	.	+	0	ID=cds-WP_063278744.1;Parent=gene-CYJ00_RS12770;Dbxref=GenBank:WP_063278744.1;Name=WP_063278744.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729132.1;locus_tag=CYJ00_RS12770;product=helicase C-terminal domain-containing protein;protein_id=WP_063278744.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	18993	20285	.	+	.	ID=gene-CYJ00_RS12775;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CYJ00_RS12775;old_locus_tag=CYJ00_012780
NZ_PJUS02000429.1	Protein Homology	CDS	18993	20285	.	+	0	ID=cds-WP_014613902.1;Parent=gene-CYJ00_RS12775;Dbxref=GenBank:WP_014613902.1;Name=WP_014613902.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=CYJ00_RS12775;product=asparagine--tRNA ligase;protein_id=WP_014613902.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	20460	21152	.	+	.	ID=gene-CYJ00_RS12780;Name=CYJ00_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12780;old_locus_tag=CYJ00_012785
NZ_PJUS02000429.1	Protein Homology	CDS	20460	21152	.	+	0	ID=cds-WP_014613903.1;Parent=gene-CYJ00_RS12780;Dbxref=GenBank:WP_014613903.1;Name=WP_014613903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=CYJ00_RS12780;product=DnaD domain-containing protein;protein_id=WP_014613903.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	21142	21816	.	+	.	ID=gene-CYJ00_RS12785;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CYJ00_RS12785;old_locus_tag=CYJ00_012790
NZ_PJUS02000429.1	Protein Homology	CDS	21142	21816	.	+	0	ID=cds-WP_015729131.1;Parent=gene-CYJ00_RS12785;Dbxref=GenBank:WP_015729131.1;Name=WP_015729131.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=CYJ00_RS12785;product=endonuclease III;protein_id=WP_015729131.1;transl_table=11
NZ_PJUS02000429.1	RefSeq	gene	21813	22148	.	+	.	ID=gene-CYJ00_RS12790;Name=CYJ00_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12790;old_locus_tag=CYJ00_012795
NZ_PJUS02000429.1	Protein Homology	CDS	21813	22148	.	+	0	ID=cds-WP_014613905.1;Parent=gene-CYJ00_RS12790;Dbxref=GenBank:WP_014613905.1;Name=WP_014613905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613905.1;locus_tag=CYJ00_RS12790;product=YpoC family protein;protein_id=WP_014613905.1;transl_table=11
##sequence-region NZ_PJUS02000017.1 1 3807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000017.1	RefSeq	region	1	3807	.	+	.	ID=NZ_PJUS02000017.1:1..3807;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000017.1	RefSeq	pseudogene	1	261	.	+	.	ID=gene-CYJ00_RS13070;Name=CYJ00_RS13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13070;old_locus_tag=CYJ00_000505;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000017.1	GeneMarkS-2+	CDS	1	261	.	+	0	ID=cds-CYJ00_RS13070;Parent=gene-CYJ00_RS13070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13070;partial=true;product=MazG-like family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	282	725	.	+	.	ID=gene-CYJ00_RS00510;Name=CYJ00_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00510;old_locus_tag=CYJ00_000510
NZ_PJUS02000017.1	Protein Homology	CDS	282	725	.	+	0	ID=cds-WP_101457960.1;Parent=gene-CYJ00_RS00510;Dbxref=GenBank:WP_101457960.1;Name=WP_101457960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168103.1;locus_tag=CYJ00_RS00510;product=hypothetical protein;protein_id=WP_101457960.1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	737	880	.	+	.	ID=gene-CYJ00_RS13195;Name=CYJ00_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13195
NZ_PJUS02000017.1	Protein Homology	CDS	737	880	.	+	0	ID=cds-WP_180912249.1;Parent=gene-CYJ00_RS13195;Dbxref=GenBank:WP_180912249.1;Name=WP_180912249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166758.1;locus_tag=CYJ00_RS13195;product=hypothetical protein;protein_id=WP_180912249.1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	887	1306	.	+	.	ID=gene-CYJ00_RS00515;Name=CYJ00_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00515;old_locus_tag=CYJ00_000515
NZ_PJUS02000017.1	Protein Homology	CDS	887	1306	.	+	0	ID=cds-WP_101457961.1;Parent=gene-CYJ00_RS00515;Dbxref=GenBank:WP_101457961.1;Name=WP_101457961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058632.1;locus_tag=CYJ00_RS00515;product=DUF722 domain-containing protein;protein_id=WP_101457961.1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	1531	1971	.	+	.	ID=gene-CYJ00_RS00520;Name=CYJ00_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00520;old_locus_tag=CYJ00_000520
NZ_PJUS02000017.1	Protein Homology	CDS	1531	1971	.	+	0	ID=cds-WP_101457962.1;Parent=gene-CYJ00_RS00520;Dbxref=GenBank:WP_101457962.1;Name=WP_101457962.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064888.1;locus_tag=CYJ00_RS00520;product=terminase small subunit;protein_id=WP_101457962.1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	1964	3214	.	+	.	ID=gene-CYJ00_RS00525;Name=CYJ00_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00525;old_locus_tag=CYJ00_000525
NZ_PJUS02000017.1	Protein Homology	CDS	1964	3214	.	+	0	ID=cds-WP_101457963.1;Parent=gene-CYJ00_RS00525;Dbxref=GenBank:WP_101457963.1;Name=WP_101457963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656828.1;locus_tag=CYJ00_RS00525;product=PBSX family phage terminase large subunit;protein_id=WP_101457963.1;transl_table=11
NZ_PJUS02000017.1	RefSeq	gene	3224	3807	.	+	.	ID=gene-CYJ00_RS00530;Name=CYJ00_RS00530;end_range=3807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00530;old_locus_tag=CYJ00_000530;partial=true
NZ_PJUS02000017.1	Protein Homology	CDS	3224	3807	.	+	0	ID=cds-WP_133158306.1;Parent=gene-CYJ00_RS00530;Dbxref=GenBank:WP_133158306.1;Name=WP_133158306.1;end_range=3807,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016988.7;locus_tag=CYJ00_RS00530;partial=true;product=phage portal protein;protein_id=WP_133158306.1;transl_table=11
##sequence-region NZ_PJUS02000413.1 1 2570
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000413.1	RefSeq	region	1	2570	.	+	.	ID=NZ_PJUS02000413.1:1..2570;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000413.1	RefSeq	gene	38	1990	.	+	.	ID=gene-CYJ00_RS12190;Name=spsN;gbkey=Gene;gene=spsN;gene_biotype=protein_coding;locus_tag=CYJ00_RS12190;old_locus_tag=CYJ00_012195
NZ_PJUS02000413.1	Protein Homology	CDS	38	1990	.	+	0	ID=cds-WP_015728543.1;Parent=gene-CYJ00_RS12190;Dbxref=GenBank:WP_015728543.1;Name=WP_015728543.1;gbkey=CDS;gene=spsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614888.1;locus_tag=CYJ00_RS12190;product=LPXTG-anchored surface protein SpsN;protein_id=WP_015728543.1;transl_table=11
##sequence-region NZ_PJUS02000060.1 1 3754
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000060.1	RefSeq	region	1	3754	.	+	.	ID=NZ_PJUS02000060.1:1..3754;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000060.1	RefSeq	gene	298	1482	.	-	.	ID=gene-CYJ00_RS01675;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01675;old_locus_tag=CYJ00_001675
NZ_PJUS02000060.1	Protein Homology	CDS	298	1482	.	-	0	ID=cds-WP_101457964.1;Parent=gene-CYJ00_RS01675;Dbxref=GenBank:WP_101457964.1;Name=WP_101457964.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729140.1;locus_tag=CYJ00_RS01675;product=30S ribosomal protein S1;protein_id=WP_101457964.1;transl_table=11
NZ_PJUS02000060.1	RefSeq	gene	1571	2230	.	-	.	ID=gene-CYJ00_RS01680;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CYJ00_RS01680;old_locus_tag=CYJ00_001680
NZ_PJUS02000060.1	Protein Homology	CDS	1571	2230	.	-	0	ID=cds-WP_014613881.1;Parent=gene-CYJ00_RS01680;Dbxref=GenBank:WP_014613881.1;Name=WP_014613881.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613881.1;locus_tag=CYJ00_RS01680;product=(d)CMP kinase;protein_id=WP_014613881.1;transl_table=11
NZ_PJUS02000060.1	RefSeq	gene	2304	3272	.	+	.	ID=gene-CYJ00_RS01685;Name=CYJ00_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01685;old_locus_tag=CYJ00_001685
NZ_PJUS02000060.1	Protein Homology	CDS	2304	3272	.	+	0	ID=cds-WP_037543001.1;Parent=gene-CYJ00_RS01685;Dbxref=GenBank:WP_037543001.1;Name=WP_037543001.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=CYJ00_RS01685;product=asparaginase;protein_id=WP_037543001.1;transl_table=11
NZ_PJUS02000060.1	RefSeq	pseudogene	3569	3754	.	-	.	ID=gene-CYJ00_RS01690;Name=CYJ00_RS01690;end_range=3754,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS01690;old_locus_tag=CYJ00_001690;partial=true;pseudo=true
NZ_PJUS02000060.1	Protein Homology	CDS	3569	3754	.	-	0	ID=cds-CYJ00_RS01690;Parent=gene-CYJ00_RS01690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CYJ00_RS01690;partial=true;product=NAD(P)-binding domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000180.1 1 3024
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000180.1	RefSeq	region	1	3024	.	+	.	ID=NZ_PJUS02000180.1:1..3024;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000180.1	RefSeq	gene	215	502	.	+	.	ID=gene-CYJ00_RS04980;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=CYJ00_RS04980;old_locus_tag=CYJ00_004985
NZ_PJUS02000180.1	Protein Homology	CDS	215	502	.	+	0	ID=cds-WP_015729412.1;Parent=gene-CYJ00_RS04980;Dbxref=GenBank:WP_015729412.1;Name=WP_015729412.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=CYJ00_RS04980;product=co-chaperone GroES;protein_id=WP_015729412.1;transl_table=11
NZ_PJUS02000180.1	RefSeq	gene	551	2170	.	+	.	ID=gene-CYJ00_RS04985;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CYJ00_RS04985;old_locus_tag=CYJ00_004990
NZ_PJUS02000180.1	Protein Homology	CDS	551	2170	.	+	0	ID=cds-WP_019167564.1;Parent=gene-CYJ00_RS04985;Dbxref=GenBank:WP_019167564.1;Name=WP_019167564.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CYJ00_RS04985;product=chaperonin GroEL;protein_id=WP_019167564.1;transl_table=11
NZ_PJUS02000180.1	RefSeq	pseudogene	2837	3024	.	+	.	ID=gene-CYJ00_RS13580;Name=CYJ00_RS13580;end_range=3024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13580;old_locus_tag=CYJ00_005000;partial=true;pseudo=true;start_range=.,2837
NZ_PJUS02000180.1	Protein Homology	CDS	2837	3024	.	+	0	ID=cds-CYJ00_RS13580;Parent=gene-CYJ00_RS13580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3024,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708297.1;locus_tag=CYJ00_RS13580;partial=true;product=SAR2788 family putative toxin;pseudo=true;start_range=.,2837;transl_table=11
##sequence-region NZ_PJUS02000398.1 1 3043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000398.1	RefSeq	region	1	3043	.	+	.	ID=NZ_PJUS02000398.1:1..3043;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000398.1	RefSeq	gene	158	1168	.	-	.	ID=gene-CYJ00_RS11715;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=CYJ00_RS11715;old_locus_tag=CYJ00_011720
NZ_PJUS02000398.1	Protein Homology	CDS	158	1168	.	-	0	ID=cds-WP_014614239.1;Parent=gene-CYJ00_RS11715;Dbxref=GenBank:WP_014614239.1;Name=WP_014614239.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=CYJ00_RS11715;product=lipoteichoic acid stability factor AuxB;protein_id=WP_014614239.1;transl_table=11
NZ_PJUS02000398.1	RefSeq	gene	1240	2313	.	-	.	ID=gene-CYJ00_RS11720;Name=CYJ00_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11720;old_locus_tag=CYJ00_011725
NZ_PJUS02000398.1	Protein Homology	CDS	1240	2313	.	-	0	ID=cds-WP_015728959.1;Parent=gene-CYJ00_RS11720;Dbxref=GenBank:WP_015728959.1;Name=WP_015728959.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=CYJ00_RS11720;product=ABC transporter substrate-binding protein;protein_id=WP_015728959.1;transl_table=11
NZ_PJUS02000398.1	RefSeq	gene	2310	3043	.	-	.	ID=gene-CYJ00_RS11725;Name=CYJ00_RS11725;end_range=3043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11725;old_locus_tag=CYJ00_011730;partial=true
NZ_PJUS02000398.1	Protein Homology	CDS	2310	3043	.	-	2	ID=cds-WP_101457966.1;Parent=gene-CYJ00_RS11725;Dbxref=GenBank:WP_101457966.1;Name=WP_101457966.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;end_range=3043,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=CYJ00_RS11725;partial=true;product=ABC transporter permease;protein_id=WP_101457966.1;transl_table=11
##sequence-region NZ_PJUS02000084.1 1 3251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000084.1	RefSeq	region	1	3251	.	+	.	ID=NZ_PJUS02000084.1:1..3251;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000084.1	RefSeq	gene	335	853	.	-	.	ID=gene-CYJ00_RS02330;Name=CYJ00_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02330;old_locus_tag=CYJ00_002330
NZ_PJUS02000084.1	Protein Homology	CDS	335	853	.	-	0	ID=cds-WP_014613726.1;Parent=gene-CYJ00_RS02330;Dbxref=GenBank:WP_014613726.1;Name=WP_014613726.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CYJ00_RS02330;product=adenine phosphoribosyltransferase;protein_id=WP_014613726.1;transl_table=11
NZ_PJUS02000084.1	RefSeq	gene	865	3150	.	-	.	ID=gene-CYJ00_RS02335;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS02335;old_locus_tag=CYJ00_002335
NZ_PJUS02000084.1	Protein Homology	CDS	865	3150	.	-	0	ID=cds-WP_142390840.1;Parent=gene-CYJ00_RS02335;Dbxref=GenBank:WP_142390840.1;Name=WP_142390840.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=CYJ00_RS02335;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_142390840.1;transl_table=11
##sequence-region NZ_PJUS02000223.1 1 2785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000223.1	RefSeq	region	1	2785	.	+	.	ID=NZ_PJUS02000223.1:1..2785;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000223.1	RefSeq	gene	46	756	.	-	.	ID=gene-CYJ00_RS06225;Name=CYJ00_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06225;old_locus_tag=CYJ00_006230
NZ_PJUS02000223.1	Protein Homology	CDS	46	756	.	-	0	ID=cds-WP_101457967.1;Parent=gene-CYJ00_RS06225;Dbxref=GenBank:WP_101457967.1;Name=WP_101457967.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614679.1;locus_tag=CYJ00_RS06225;product=trypsin-like serine peptidase;protein_id=WP_101457967.1;transl_table=11
NZ_PJUS02000223.1	RefSeq	gene	962	1681	.	-	.	ID=gene-CYJ00_RS06230;Name=CYJ00_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06230;old_locus_tag=CYJ00_006235
NZ_PJUS02000223.1	Protein Homology	CDS	962	1681	.	-	0	ID=cds-WP_037543868.1;Parent=gene-CYJ00_RS06230;Dbxref=GenBank:WP_037543868.1;Name=WP_037543868.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728668.1;locus_tag=CYJ00_RS06230;product=trypsin-like serine peptidase;protein_id=WP_037543868.1;transl_table=11
NZ_PJUS02000223.1	RefSeq	gene	1904	2611	.	-	.	ID=gene-CYJ00_RS06235;Name=CYJ00_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06235;old_locus_tag=CYJ00_006240
NZ_PJUS02000223.1	Protein Homology	CDS	1904	2611	.	-	0	ID=cds-WP_101457968.1;Parent=gene-CYJ00_RS06235;Dbxref=GenBank:WP_101457968.1;Name=WP_101457968.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728669.1;locus_tag=CYJ00_RS06235;product=trypsin-like serine peptidase;protein_id=WP_101457968.1;transl_table=11
##sequence-region NZ_PJUS02000302.1 1 3624
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000302.1	RefSeq	region	1	3624	.	+	.	ID=NZ_PJUS02000302.1:1..3624;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000302.1	RefSeq	gene	124	870	.	+	.	ID=gene-CYJ00_RS08080;Name=CYJ00_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08080;old_locus_tag=CYJ00_008085
NZ_PJUS02000302.1	Protein Homology	CDS	124	870	.	+	0	ID=cds-WP_015729071.1;Parent=gene-CYJ00_RS08080;Dbxref=GenBank:WP_015729071.1;Name=WP_015729071.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614014.1;locus_tag=CYJ00_RS08080;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_015729071.1;transl_table=11
NZ_PJUS02000302.1	RefSeq	gene	901	2193	.	+	.	ID=gene-CYJ00_RS08085;Name=CYJ00_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08085;old_locus_tag=CYJ00_008090
NZ_PJUS02000302.1	Protein Homology	CDS	901	2193	.	+	0	ID=cds-WP_015729072.1;Parent=gene-CYJ00_RS08085;Dbxref=GenBank:WP_015729072.1;Name=WP_015729072.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614013.1;locus_tag=CYJ00_RS08085;product=MFS transporter;protein_id=WP_015729072.1;transl_table=11
NZ_PJUS02000302.1	RefSeq	gene	2351	2593	.	+	.	ID=gene-CYJ00_RS08090;Name=CYJ00_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08090;old_locus_tag=CYJ00_008095
NZ_PJUS02000302.1	Protein Homology	CDS	2351	2593	.	+	0	ID=cds-WP_015729073.1;Parent=gene-CYJ00_RS08090;Dbxref=GenBank:WP_015729073.1;Name=WP_015729073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729073.1;locus_tag=CYJ00_RS08090;product=hypothetical protein;protein_id=WP_015729073.1;transl_table=11
NZ_PJUS02000302.1	RefSeq	gene	2672	3412	.	+	.	ID=gene-CYJ00_RS08095;Name=CYJ00_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08095;old_locus_tag=CYJ00_008100
NZ_PJUS02000302.1	Protein Homology	CDS	2672	3412	.	+	0	ID=cds-WP_101457969.1;Parent=gene-CYJ00_RS08095;Dbxref=GenBank:WP_101457969.1;Name=WP_101457969.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729074.1;locus_tag=CYJ00_RS08095;product=HAD family hydrolase;protein_id=WP_101457969.1;transl_table=11
##sequence-region NZ_PJUS02000403.1 1 2446
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000403.1	RefSeq	region	1	2446	.	+	.	ID=NZ_PJUS02000403.1:1..2446;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000403.1	RefSeq	gene	140	1300	.	-	.	ID=gene-CYJ00_RS11825;Name=CYJ00_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11825;old_locus_tag=CYJ00_011830
NZ_PJUS02000403.1	Protein Homology	CDS	140	1300	.	-	0	ID=cds-WP_015729536.1;Parent=gene-CYJ00_RS11825;Dbxref=GenBank:WP_015729536.1;Name=WP_015729536.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166578.1;locus_tag=CYJ00_RS11825;product=acyl-CoA dehydrogenase family protein;protein_id=WP_015729536.1;transl_table=11
NZ_PJUS02000403.1	RefSeq	gene	1737	2084	.	-	.	ID=gene-CYJ00_RS11830;Name=CYJ00_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11830;old_locus_tag=CYJ00_011835
NZ_PJUS02000403.1	Protein Homology	CDS	1737	2084	.	-	0	ID=cds-WP_014613169.1;Parent=gene-CYJ00_RS11830;Dbxref=GenBank:WP_014613169.1;Name=WP_014613169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=CYJ00_RS11830;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613169.1;transl_table=11
##sequence-region NZ_PJUS02000098.1 1 17881
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000098.1	RefSeq	region	1	17881	.	+	.	ID=NZ_PJUS02000098.1:1..17881;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000098.1	RefSeq	gene	1	193	.	-	.	ID=gene-CYJ00_RS02655;Name=CYJ00_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02655;old_locus_tag=CYJ00_002655;partial=true;start_range=.,1
NZ_PJUS02000098.1	Protein Homology	CDS	1	193	.	-	0	ID=cds-WP_133158321.1;Parent=gene-CYJ00_RS02655;Dbxref=GenBank:WP_133158321.1;Name=WP_133158321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401417.1;locus_tag=CYJ00_RS02655;partial=true;product=DUF1462 family protein;protein_id=WP_133158321.1;start_range=.,1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	298	540	.	+	.	ID=gene-CYJ00_RS02660;Name=CYJ00_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02660;old_locus_tag=CYJ00_002660
NZ_PJUS02000098.1	Protein Homology	CDS	298	540	.	+	0	ID=cds-WP_014614429.1;Parent=gene-CYJ00_RS02660;Dbxref=GenBank:WP_014614429.1;Name=WP_014614429.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=CYJ00_RS02660;product=NifU family protein;protein_id=WP_014614429.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	1124	2089	.	-	.	ID=gene-CYJ00_RS02665;Name=CYJ00_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02665;old_locus_tag=CYJ00_002665
NZ_PJUS02000098.1	Protein Homology	CDS	1124	2089	.	-	0	ID=cds-WP_014614430.1;Parent=gene-CYJ00_RS02665;Dbxref=GenBank:WP_014614430.1;Name=WP_014614430.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=CYJ00_RS02665;product=2-hydroxyacid dehydrogenase;protein_id=WP_014614430.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	2096	2881	.	-	.	ID=gene-CYJ00_RS02670;Name=CYJ00_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02670;old_locus_tag=CYJ00_002670
NZ_PJUS02000098.1	Protein Homology	CDS	2096	2881	.	-	0	ID=cds-WP_037543552.1;Parent=gene-CYJ00_RS02670;Dbxref=GenBank:WP_037543552.1;Name=WP_037543552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166989.1;locus_tag=CYJ00_RS02670;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_037543552.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	2885	3316	.	-	.	ID=gene-CYJ00_RS02675;Name=CYJ00_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02675;old_locus_tag=CYJ00_002675
NZ_PJUS02000098.1	Protein Homology	CDS	2885	3316	.	-	0	ID=cds-WP_031253621.1;Parent=gene-CYJ00_RS02675;Dbxref=GenBank:WP_031253621.1;Name=WP_031253621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481626.1;locus_tag=CYJ00_RS02675;product=DUF86 domain-containing protein;protein_id=WP_031253621.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	3417	3683	.	+	.	ID=gene-CYJ00_RS02680;Name=CYJ00_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02680;old_locus_tag=CYJ00_002680
NZ_PJUS02000098.1	Protein Homology	CDS	3417	3683	.	+	0	ID=cds-WP_020219501.1;Parent=gene-CYJ00_RS02680;Dbxref=GenBank:WP_020219501.1;Name=WP_020219501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=CYJ00_RS02680;product=DUF3055 domain-containing protein;protein_id=WP_020219501.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	4311	4676	.	-	.	ID=gene-CYJ00_RS02685;Name=CYJ00_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02685;old_locus_tag=CYJ00_002685
NZ_PJUS02000098.1	Protein Homology	CDS	4311	4676	.	-	0	ID=cds-WP_014614434.1;Parent=gene-CYJ00_RS02685;Dbxref=GenBank:WP_014614434.1;Name=WP_014614434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=CYJ00_RS02685;product=YutD family protein;protein_id=WP_014614434.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	4695	5612	.	-	.	ID=gene-CYJ00_RS02690;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02690;old_locus_tag=CYJ00_002690
NZ_PJUS02000098.1	Protein Homology	CDS	4695	5612	.	-	0	ID=cds-WP_014614435.1;Parent=gene-CYJ00_RS02690;Dbxref=GenBank:WP_014614435.1;Name=WP_014614435.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614435.1;locus_tag=CYJ00_RS02690;product=lipoyl synthase;protein_id=WP_014614435.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	5698	7017	.	-	.	ID=gene-CYJ00_RS02695;Name=CYJ00_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02695;old_locus_tag=CYJ00_002695
NZ_PJUS02000098.1	Protein Homology	CDS	5698	7017	.	-	0	ID=cds-WP_014614436.1;Parent=gene-CYJ00_RS02695;Dbxref=GenBank:WP_014614436.1;Name=WP_014614436.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728857.1;locus_tag=CYJ00_RS02695;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_014614436.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	7034	7864	.	-	.	ID=gene-CYJ00_RS02700;Name=CYJ00_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02700;old_locus_tag=CYJ00_002700
NZ_PJUS02000098.1	Protein Homology	CDS	7034	7864	.	-	0	ID=cds-WP_198597671.1;Parent=gene-CYJ00_RS02700;Dbxref=GenBank:WP_198597671.1;Name=WP_198597671.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956137.1;locus_tag=CYJ00_RS02700;product=sulfite exporter TauE/SafE family protein;protein_id=WP_198597671.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	7873	8721	.	-	.	ID=gene-CYJ00_RS02705;Name=CYJ00_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02705;old_locus_tag=CYJ00_002705
NZ_PJUS02000098.1	Protein Homology	CDS	7873	8721	.	-	0	ID=cds-WP_014614438.1;Parent=gene-CYJ00_RS02705;Dbxref=GenBank:WP_014614438.1;Name=WP_014614438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=CYJ00_RS02705;product=DUF72 domain-containing protein;protein_id=WP_014614438.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	8845	9552	.	+	.	ID=gene-CYJ00_RS02710;Name=CYJ00_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02710;old_locus_tag=CYJ00_002710
NZ_PJUS02000098.1	Protein Homology	CDS	8845	9552	.	+	0	ID=cds-WP_014614439.1;Parent=gene-CYJ00_RS02710;Dbxref=GenBank:WP_014614439.1;Name=WP_014614439.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219503.1;locus_tag=CYJ00_RS02710;product=alpha/beta hydrolase family protein;protein_id=WP_014614439.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	9585	9707	.	-	.	ID=gene-CYJ00_RS13790;Name=CYJ00_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13790
NZ_PJUS02000098.1	GeneMarkS-2+	CDS	9585	9707	.	-	0	ID=cds-WP_014614440.1;Parent=gene-CYJ00_RS13790;Dbxref=GenBank:WP_014614440.1;Name=WP_014614440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13790;product=hypothetical protein;protein_id=WP_014614440.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	10103	10357	.	-	.	ID=gene-CYJ00_RS13535;Name=CYJ00_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13535;old_locus_tag=CYJ00_002715
NZ_PJUS02000098.1	GeneMarkS-2+	CDS	10103	10357	.	-	0	ID=cds-WP_049770162.1;Parent=gene-CYJ00_RS13535;Dbxref=GenBank:WP_049770162.1;Name=WP_049770162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13535;product=hypothetical protein;protein_id=WP_049770162.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	10616	11614	.	-	.	ID=gene-CYJ00_RS02720;Name=CYJ00_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02720;old_locus_tag=CYJ00_002720
NZ_PJUS02000098.1	Protein Homology	CDS	10616	11614	.	-	0	ID=cds-WP_101457695.1;Parent=gene-CYJ00_RS02720;Dbxref=GenBank:WP_101457695.1;Name=WP_101457695.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=CYJ00_RS02720;product=hemolysin family protein;protein_id=WP_101457695.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	11904	12188	.	-	.	ID=gene-CYJ00_RS02725;Name=CYJ00_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02725;old_locus_tag=CYJ00_002725
NZ_PJUS02000098.1	Protein Homology	CDS	11904	12188	.	-	0	ID=cds-WP_015728852.1;Parent=gene-CYJ00_RS02725;Dbxref=GenBank:WP_015728852.1;Name=WP_015728852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728852.1;locus_tag=CYJ00_RS02725;product=type 1 glutamine amidotransferase family protein;protein_id=WP_015728852.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	12334	13731	.	-	.	ID=gene-CYJ00_RS02730;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02730;old_locus_tag=CYJ00_002730
NZ_PJUS02000098.1	Protein Homology	CDS	12334	13731	.	-	0	ID=cds-WP_014614443.1;Parent=gene-CYJ00_RS02730;Dbxref=GenBank:WP_014614443.1;Name=WP_014614443.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CYJ00_RS02730;product=Fe-S cluster assembly protein SufB;protein_id=WP_014614443.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	13829	14278	.	-	.	ID=gene-CYJ00_RS02735;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=CYJ00_RS02735;old_locus_tag=CYJ00_002735
NZ_PJUS02000098.1	Protein Homology	CDS	13829	14278	.	-	0	ID=cds-WP_014614444.1;Parent=gene-CYJ00_RS02735;Dbxref=GenBank:WP_014614444.1;Name=WP_014614444.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=CYJ00_RS02735;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_014614444.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	14268	15509	.	-	.	ID=gene-CYJ00_RS02740;Name=CYJ00_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02740;old_locus_tag=CYJ00_002740
NZ_PJUS02000098.1	Protein Homology	CDS	14268	15509	.	-	0	ID=cds-WP_014614445.1;Parent=gene-CYJ00_RS02740;Dbxref=GenBank:WP_014614445.1;Name=WP_014614445.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533341.1;locus_tag=CYJ00_RS02740;product=cysteine desulfurase;protein_id=WP_014614445.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	15538	16845	.	-	.	ID=gene-CYJ00_RS02745;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CYJ00_RS02745;old_locus_tag=CYJ00_002745
NZ_PJUS02000098.1	Protein Homology	CDS	15538	16845	.	-	0	ID=cds-WP_101457696.1;Parent=gene-CYJ00_RS02745;Dbxref=GenBank:WP_101457696.1;Name=WP_101457696.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=CYJ00_RS02745;product=Fe-S cluster assembly protein SufD;protein_id=WP_101457696.1;transl_table=11
NZ_PJUS02000098.1	RefSeq	gene	16867	17637	.	-	.	ID=gene-CYJ00_RS02750;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CYJ00_RS02750;old_locus_tag=CYJ00_002750
NZ_PJUS02000098.1	Protein Homology	CDS	16867	17637	.	-	0	ID=cds-WP_014614447.1;Parent=gene-CYJ00_RS02750;Dbxref=GenBank:WP_014614447.1;Name=WP_014614447.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=CYJ00_RS02750;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_014614447.1;transl_table=11
##sequence-region NZ_PJUS02000067.1 1 3625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000067.1	RefSeq	region	1	3625	.	+	.	ID=NZ_PJUS02000067.1:1..3625;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000067.1	RefSeq	gene	19	375	.	+	.	ID=gene-CYJ00_RS01785;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CYJ00_RS01785;old_locus_tag=CYJ00_001785
NZ_PJUS02000067.1	Protein Homology	CDS	19	375	.	+	0	ID=cds-WP_014613765.1;Parent=gene-CYJ00_RS01785;Dbxref=GenBank:WP_014613765.1;Name=WP_014613765.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=CYJ00_RS01785;product=ribosome silencing factor;protein_id=WP_014613765.1;transl_table=11
NZ_PJUS02000067.1	RefSeq	gene	375	1097	.	+	.	ID=gene-CYJ00_RS01790;Name=CYJ00_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01790;old_locus_tag=CYJ00_001790
NZ_PJUS02000067.1	Protein Homology	CDS	375	1097	.	+	0	ID=cds-WP_015729258.1;Parent=gene-CYJ00_RS01790;Dbxref=GenBank:WP_015729258.1;Name=WP_015729258.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=CYJ00_RS01790;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_015729258.1;transl_table=11
NZ_PJUS02000067.1	RefSeq	gene	1151	1819	.	+	.	ID=gene-CYJ00_RS01795;Name=CYJ00_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01795;old_locus_tag=CYJ00_001795
NZ_PJUS02000067.1	Protein Homology	CDS	1151	1819	.	+	0	ID=cds-WP_014613767.1;Parent=gene-CYJ00_RS01795;Dbxref=GenBank:WP_014613767.1;Name=WP_014613767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613767.1;locus_tag=CYJ00_RS01795;product=helix-hairpin-helix domain-containing protein;protein_id=WP_014613767.1;transl_table=11
NZ_PJUS02000067.1	RefSeq	gene	1905	2363	.	+	.	ID=gene-CYJ00_RS01800;Name=CYJ00_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01800;old_locus_tag=CYJ00_001800
NZ_PJUS02000067.1	Protein Homology	CDS	1905	2363	.	+	0	ID=cds-WP_101457970.1;Parent=gene-CYJ00_RS01800;Dbxref=GenBank:WP_101457970.1;Name=WP_101457970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471065.1;locus_tag=CYJ00_RS01800;product=ComE operon protein 2;protein_id=WP_101457970.1;transl_table=11
NZ_PJUS02000067.1	RefSeq	gene	2366	3625	.	+	.	ID=gene-CYJ00_RS01805;Name=CYJ00_RS01805;end_range=3625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01805;old_locus_tag=CYJ00_001805;partial=true
NZ_PJUS02000067.1	Protein Homology	CDS	2366	3625	.	+	0	ID=cds-WP_133158311.1;Parent=gene-CYJ00_RS01805;Dbxref=GenBank:WP_133158311.1;Name=WP_133158311.1;Ontology_term=GO:0030420,GO:0016020;end_range=3625,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219756.1;locus_tag=CYJ00_RS01805;partial=true;product=ComEC/Rec2 family competence protein;protein_id=WP_133158311.1;transl_table=11
##sequence-region NZ_PJUS02000222.1 1 3824
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000222.1	RefSeq	region	1	3824	.	+	.	ID=NZ_PJUS02000222.1:1..3824;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000222.1	RefSeq	gene	148	777	.	-	.	ID=gene-CYJ00_RS06195;Name=CYJ00_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06195;old_locus_tag=CYJ00_006200
NZ_PJUS02000222.1	Protein Homology	CDS	148	777	.	-	0	ID=cds-WP_037542865.1;Parent=gene-CYJ00_RS06195;Dbxref=GenBank:WP_037542865.1;Name=WP_037542865.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165229.1;locus_tag=CYJ00_RS06195;product=MBL fold metallo-hydrolase;protein_id=WP_037542865.1;transl_table=11
NZ_PJUS02000222.1	RefSeq	gene	790	1101	.	-	.	ID=gene-CYJ00_RS06200;Name=CYJ00_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06200;old_locus_tag=CYJ00_006205
NZ_PJUS02000222.1	Protein Homology	CDS	790	1101	.	-	0	ID=cds-WP_014613818.1;Parent=gene-CYJ00_RS06200;Dbxref=GenBank:WP_014613818.1;Name=WP_014613818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613818.1;locus_tag=CYJ00_RS06200;product=MTH1187 family thiamine-binding protein;protein_id=WP_014613818.1;transl_table=11
NZ_PJUS02000222.1	RefSeq	gene	1102	2088	.	-	.	ID=gene-CYJ00_RS06205;Name=CYJ00_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06205;old_locus_tag=CYJ00_006210
NZ_PJUS02000222.1	Protein Homology	CDS	1102	2088	.	-	0	ID=cds-WP_014613817.1;Parent=gene-CYJ00_RS06205;Dbxref=GenBank:WP_014613817.1;Name=WP_014613817.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=CYJ00_RS06205;product=ROK family glucokinase;protein_id=WP_014613817.1;transl_table=11
NZ_PJUS02000222.1	RefSeq	gene	2085	2288	.	-	.	ID=gene-CYJ00_RS06210;Name=CYJ00_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06210;old_locus_tag=CYJ00_006215
NZ_PJUS02000222.1	Protein Homology	CDS	2085	2288	.	-	0	ID=cds-WP_014613816.1;Parent=gene-CYJ00_RS06210;Dbxref=GenBank:WP_014613816.1;Name=WP_014613816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=CYJ00_RS06210;product=YqgQ family protein;protein_id=WP_014613816.1;transl_table=11
NZ_PJUS02000222.1	RefSeq	gene	2290	3729	.	-	.	ID=gene-CYJ00_RS06215;Name=CYJ00_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06215;old_locus_tag=CYJ00_006220
NZ_PJUS02000222.1	Protein Homology	CDS	2290	3729	.	-	0	ID=cds-WP_014613815.1;Parent=gene-CYJ00_RS06215;Dbxref=GenBank:WP_014613815.1;Name=WP_014613815.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=CYJ00_RS06215;product=rhomboid family intramembrane serine protease;protein_id=WP_014613815.1;transl_table=11
##sequence-region NZ_PJUS02000089.1 1 2328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000089.1	RefSeq	region	1	2328	.	+	.	ID=NZ_PJUS02000089.1:1..2328;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000089.1	RefSeq	gene	15	761	.	+	.	ID=gene-CYJ00_RS02365;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS02365;old_locus_tag=CYJ00_002365
NZ_PJUS02000089.1	Protein Homology	CDS	15	761	.	+	0	ID=cds-WP_101457971.1;Parent=gene-CYJ00_RS02365;Dbxref=GenBank:WP_101457971.1;Name=WP_101457971.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166409.1;locus_tag=CYJ00_RS02365;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_101457971.1;transl_table=11
NZ_PJUS02000089.1	RefSeq	gene	873	2234	.	-	.	ID=gene-CYJ00_RS02370;Name=CYJ00_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02370;old_locus_tag=CYJ00_002370
NZ_PJUS02000089.1	Protein Homology	CDS	873	2234	.	-	0	ID=cds-WP_101457972.1;Parent=gene-CYJ00_RS02370;Dbxref=GenBank:WP_101457972.1;Name=WP_101457972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613417.1;locus_tag=CYJ00_RS02370;product=SdrH family protein;protein_id=WP_101457972.1;transl_table=11
##sequence-region NZ_PJUS02000406.1 1 2438
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000406.1	RefSeq	region	1	2438	.	+	.	ID=NZ_PJUS02000406.1:1..2438;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000406.1	RefSeq	gene	1	2279	.	-	.	ID=gene-CYJ00_RS11910;Name=CYJ00_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11910;old_locus_tag=CYJ00_011915;partial=true;start_range=.,1
NZ_PJUS02000406.1	Protein Homology	CDS	1	2279	.	-	0	ID=cds-WP_133158359.1;Parent=gene-CYJ00_RS11910;Dbxref=GenBank:WP_133158359.1;Name=WP_133158359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ00_RS11910;partial=true;product=YPDG domain-containing protein;protein_id=WP_133158359.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000250.1 1 3137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000250.1	RefSeq	region	1	3137	.	+	.	ID=NZ_PJUS02000250.1:1..3137;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000250.1	RefSeq	gene	250	2472	.	-	.	ID=gene-CYJ00_RS06885;Name=CYJ00_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06885;old_locus_tag=CYJ00_006890
NZ_PJUS02000250.1	Protein Homology	CDS	250	2472	.	-	0	ID=cds-WP_101457973.1;Parent=gene-CYJ00_RS06885;Dbxref=GenBank:WP_101457973.1;Name=WP_101457973.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165310.1;locus_tag=CYJ00_RS06885;product=transglycosylase domain-containing protein;protein_id=WP_101457973.1;transl_table=11
NZ_PJUS02000250.1	RefSeq	gene	2469	3095	.	-	.	ID=gene-CYJ00_RS06890;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=CYJ00_RS06890;old_locus_tag=CYJ00_006895
NZ_PJUS02000250.1	Protein Homology	CDS	2469	3095	.	-	0	ID=cds-WP_014613907.1;Parent=gene-CYJ00_RS06890;Dbxref=GenBank:WP_014613907.1;Name=WP_014613907.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=CYJ00_RS06890;product=Holliday junction resolvase RecU;protein_id=WP_014613907.1;transl_table=11
##sequence-region NZ_PJUS02000132.1 1 2676
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000132.1	RefSeq	region	1	2676	.	+	.	ID=NZ_PJUS02000132.1:1..2676;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000132.1	RefSeq	gene	458	2260	.	+	.	ID=gene-CYJ00_RS03710;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CYJ00_RS03710;old_locus_tag=CYJ00_003715
NZ_PJUS02000132.1	Protein Homology	CDS	458	2260	.	+	0	ID=cds-WP_096536375.1;Parent=gene-CYJ00_RS03710;Dbxref=GenBank:WP_096536375.1;Name=WP_096536375.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CYJ00_RS03710;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_096536375.1;transl_table=11
##sequence-region NZ_PJUS02000041.1 1 2449
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000041.1	RefSeq	region	1	2449	.	+	.	ID=NZ_PJUS02000041.1:1..2449;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000041.1	RefSeq	gene	466	642	.	+	.	ID=gene-CYJ00_RS13200;Name=CYJ00_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13200
NZ_PJUS02000041.1	Protein Homology	CDS	466	642	.	+	0	ID=cds-WP_014612966.1;Parent=gene-CYJ00_RS13200;Dbxref=GenBank:WP_014612966.1;Name=WP_014612966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=CYJ00_RS13200;product=hypothetical protein;protein_id=WP_014612966.1;transl_table=11
NZ_PJUS02000041.1	RefSeq	gene	905	1729	.	+	.	ID=gene-CYJ00_RS01130;Name=CYJ00_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01130;old_locus_tag=CYJ00_001130
NZ_PJUS02000041.1	Protein Homology	CDS	905	1729	.	+	0	ID=cds-WP_014612967.1;Parent=gene-CYJ00_RS01130;Dbxref=GenBank:WP_014612967.1;Name=WP_014612967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612967.1;locus_tag=CYJ00_RS01130;product=hypothetical protein;protein_id=WP_014612967.1;transl_table=11
NZ_PJUS02000041.1	RefSeq	gene	1949	2398	.	-	.	ID=gene-CYJ00_RS01135;Name=CYJ00_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01135;old_locus_tag=CYJ00_001135
NZ_PJUS02000041.1	Protein Homology	CDS	1949	2398	.	-	0	ID=cds-WP_014612968.1;Parent=gene-CYJ00_RS01135;Dbxref=GenBank:WP_014612968.1;Name=WP_014612968.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164946.1;locus_tag=CYJ00_RS01135;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014612968.1;transl_table=11
##sequence-region NZ_PJUS02000371.1 1 2638
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000371.1	RefSeq	region	1	2638	.	+	.	ID=NZ_PJUS02000371.1:1..2638;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000371.1	RefSeq	gene	53	1423	.	+	.	ID=gene-CYJ00_RS11100;Name=CYJ00_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11100;old_locus_tag=CYJ00_011105
NZ_PJUS02000371.1	Protein Homology	CDS	53	1423	.	+	0	ID=cds-WP_014613276.1;Parent=gene-CYJ00_RS11100;Dbxref=GenBank:WP_014613276.1;Name=WP_014613276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613276.1;locus_tag=CYJ00_RS11100;product=YjiH family protein;protein_id=WP_014613276.1;transl_table=11
NZ_PJUS02000371.1	RefSeq	gene	1907	2167	.	-	.	ID=gene-CYJ00_RS11105;Name=CYJ00_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11105;old_locus_tag=CYJ00_011110
NZ_PJUS02000371.1	Protein Homology	CDS	1907	2167	.	-	0	ID=cds-WP_014613277.1;Parent=gene-CYJ00_RS11105;Dbxref=GenBank:WP_014613277.1;Name=WP_014613277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722958.1;locus_tag=CYJ00_RS11105;product=SunI/YnzG family protein;protein_id=WP_014613277.1;transl_table=11
NZ_PJUS02000371.1	RefSeq	gene	2357	2638	.	+	.	ID=gene-CYJ00_RS11110;Name=CYJ00_RS11110;end_range=2638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11110;old_locus_tag=CYJ00_011115;partial=true
NZ_PJUS02000371.1	Protein Homology	CDS	2357	2638	.	+	0	ID=cds-WP_133158356.1;Parent=gene-CYJ00_RS11110;Dbxref=GenBank:WP_133158356.1;Name=WP_133158356.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;end_range=2638,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=CYJ00_RS11110;partial=true;product=metal-dependent hydrolase;protein_id=WP_133158356.1;transl_table=11
##sequence-region NZ_PJUS02000177.1 1 2536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000177.1	RefSeq	region	1	2536	.	+	.	ID=NZ_PJUS02000177.1:1..2536;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000177.1	RefSeq	gene	151	1068	.	-	.	ID=gene-CYJ00_RS04880;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CYJ00_RS04880;old_locus_tag=CYJ00_004885
NZ_PJUS02000177.1	Protein Homology	CDS	151	1068	.	-	0	ID=cds-WP_101457974.1;Parent=gene-CYJ00_RS04880;Dbxref=GenBank:WP_101457974.1;Name=WP_101457974.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165315.1;locus_tag=CYJ00_RS04880;product=EamA family transporter RarD;protein_id=WP_101457974.1;transl_table=11
NZ_PJUS02000177.1	RefSeq	gene	1102	2229	.	-	.	ID=gene-CYJ00_RS04885;Name=CYJ00_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04885;old_locus_tag=CYJ00_004890
NZ_PJUS02000177.1	Protein Homology	CDS	1102	2229	.	-	0	ID=cds-WP_063278739.1;Parent=gene-CYJ00_RS04885;Dbxref=GenBank:WP_063278739.1;Name=WP_063278739.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219607.1;locus_tag=CYJ00_RS04885;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_063278739.1;transl_table=11
##sequence-region NZ_PJUS02000076.1 1 2823
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000076.1	RefSeq	region	1	2823	.	+	.	ID=NZ_PJUS02000076.1:1..2823;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000076.1	RefSeq	gene	1	1512	.	-	.	ID=gene-CYJ00_RS02015;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CYJ00_RS02015;old_locus_tag=CYJ00_002015;partial=true;start_range=.,1
NZ_PJUS02000076.1	Protein Homology	CDS	1	1512	.	-	0	ID=cds-WP_101457975.1;Parent=gene-CYJ00_RS02015;Dbxref=GenBank:WP_101457975.1;Name=WP_101457975.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020007531.1;locus_tag=CYJ00_RS02015;partial=true;product=pyruvate kinase;protein_id=WP_101457975.1;start_range=.,1;transl_table=11
NZ_PJUS02000076.1	RefSeq	gene	1531	2499	.	-	.	ID=gene-CYJ00_RS02020;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02020;old_locus_tag=CYJ00_002020
NZ_PJUS02000076.1	Protein Homology	CDS	1531	2499	.	-	0	ID=cds-WP_014613677.1;Parent=gene-CYJ00_RS02020;Dbxref=GenBank:WP_014613677.1;Name=WP_014613677.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=CYJ00_RS02020;product=6-phosphofructokinase;protein_id=WP_014613677.1;transl_table=11
##sequence-region NZ_PJUS02000215.1 1 13932
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000215.1	RefSeq	region	1	13932	.	+	.	ID=NZ_PJUS02000215.1:1..13932;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000215.1	RefSeq	gene	1	405	.	+	.	ID=gene-CYJ00_RS05905;Name=CYJ00_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05905;old_locus_tag=CYJ00_005910;partial=true;start_range=.,1
NZ_PJUS02000215.1	Protein Homology	CDS	1	405	.	+	0	ID=cds-WP_133158331.1;Parent=gene-CYJ00_RS05905;Dbxref=GenBank:WP_133158331.1;Name=WP_133158331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500456.1;locus_tag=CYJ00_RS05905;partial=true;product=DUF1829 domain-containing protein;protein_id=WP_133158331.1;start_range=.,1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	778	2166	.	-	.	ID=gene-CYJ00_RS05910;Name=CYJ00_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05910;old_locus_tag=CYJ00_005915
NZ_PJUS02000215.1	Protein Homology	CDS	778	2166	.	-	0	ID=cds-WP_096536255.1;Parent=gene-CYJ00_RS05910;Dbxref=GenBank:WP_096536255.1;Name=WP_096536255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=CYJ00_RS05910;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_096536255.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	2319	2669	.	+	.	ID=gene-CYJ00_RS05915;Name=CYJ00_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05915;old_locus_tag=CYJ00_005920
NZ_PJUS02000215.1	Protein Homology	CDS	2319	2669	.	+	0	ID=cds-WP_015729673.1;Parent=gene-CYJ00_RS05915;Dbxref=GenBank:WP_015729673.1;Name=WP_015729673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729673.1;locus_tag=CYJ00_RS05915;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_015729673.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	2736	3095	.	-	.	ID=gene-CYJ00_RS05920;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=CYJ00_RS05920;old_locus_tag=CYJ00_005925
NZ_PJUS02000215.1	Protein Homology	CDS	2736	3095	.	-	0	ID=cds-WP_014612912.1;Parent=gene-CYJ00_RS05920;Dbxref=GenBank:WP_014612912.1;Name=WP_014612912.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124171.1;locus_tag=CYJ00_RS05920;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_014612912.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	3092	3673	.	-	.	ID=gene-CYJ00_RS05925;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CYJ00_RS05925;old_locus_tag=CYJ00_005930
NZ_PJUS02000215.1	Protein Homology	CDS	3092	3673	.	-	0	ID=cds-WP_014612911.1;Parent=gene-CYJ00_RS05925;Dbxref=GenBank:WP_014612911.1;Name=WP_014612911.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166492.1;locus_tag=CYJ00_RS05925;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_014612911.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	3696	4658	.	-	.	ID=gene-CYJ00_RS05930;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=CYJ00_RS05930;old_locus_tag=CYJ00_005935
NZ_PJUS02000215.1	Protein Homology	CDS	3696	4658	.	-	0	ID=cds-WP_096533816.1;Parent=gene-CYJ00_RS05930;Dbxref=GenBank:WP_096533816.1;Name=WP_096533816.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=CYJ00_RS05930;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_096533816.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	4825	5526	.	-	.	ID=gene-CYJ00_RS05935;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05935;old_locus_tag=CYJ00_005940
NZ_PJUS02000215.1	Protein Homology	CDS	4825	5526	.	-	0	ID=cds-WP_014612909.1;Parent=gene-CYJ00_RS05935;Dbxref=GenBank:WP_014612909.1;Name=WP_014612909.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498828.1;locus_tag=CYJ00_RS05935;product=antiholin-like protein LrgB;protein_id=WP_014612909.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	5519	5953	.	-	.	ID=gene-CYJ00_RS05940;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05940;old_locus_tag=CYJ00_005945
NZ_PJUS02000215.1	Protein Homology	CDS	5519	5953	.	-	0	ID=cds-WP_096536253.1;Parent=gene-CYJ00_RS05940;Dbxref=GenBank:WP_096536253.1;Name=WP_096536253.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612908.1;locus_tag=CYJ00_RS05940;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_096536253.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	6751	7485	.	-	.	ID=gene-CYJ00_RS05945;Name=CYJ00_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05945;old_locus_tag=CYJ00_005950
NZ_PJUS02000215.1	Protein Homology	CDS	6751	7485	.	-	0	ID=cds-WP_014612907.1;Parent=gene-CYJ00_RS05945;Dbxref=GenBank:WP_014612907.1;Name=WP_014612907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612907.1;locus_tag=CYJ00_RS05945;product=response regulator transcription factor LytR;protein_id=WP_014612907.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	7489	9240	.	-	.	ID=gene-CYJ00_RS05950;Name=CYJ00_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05950;old_locus_tag=CYJ00_005955
NZ_PJUS02000215.1	Protein Homology	CDS	7489	9240	.	-	0	ID=cds-WP_101457697.1;Parent=gene-CYJ00_RS05950;Dbxref=GenBank:WP_101457697.1;Name=WP_101457697.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166488.1;locus_tag=CYJ00_RS05950;product=sensor histidine kinase;protein_id=WP_101457697.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	9715	10893	.	-	.	ID=gene-CYJ00_RS05955;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CYJ00_RS05955;old_locus_tag=CYJ00_005960
NZ_PJUS02000215.1	Protein Homology	CDS	9715	10893	.	-	0	ID=cds-WP_014612904.1;Parent=gene-CYJ00_RS05955;Dbxref=GenBank:WP_014612904.1;Name=WP_014612904.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=CYJ00_RS05955;product=phosphopentomutase;protein_id=WP_014612904.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	10927	11589	.	-	.	ID=gene-CYJ00_RS05960;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CYJ00_RS05960;old_locus_tag=CYJ00_005965
NZ_PJUS02000215.1	Protein Homology	CDS	10927	11589	.	-	0	ID=cds-WP_096536251.1;Parent=gene-CYJ00_RS05960;Dbxref=GenBank:WP_096536251.1;Name=WP_096536251.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=CYJ00_RS05960;product=deoxyribose-phosphate aldolase;protein_id=WP_096536251.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	11920	12729	.	+	.	ID=gene-CYJ00_RS05965;Name=CYJ00_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05965;old_locus_tag=CYJ00_005970
NZ_PJUS02000215.1	Protein Homology	CDS	11920	12729	.	+	0	ID=cds-WP_096536249.1;Parent=gene-CYJ00_RS05965;Dbxref=GenBank:WP_096536249.1;Name=WP_096536249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=CYJ00_RS05965;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_096536249.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	12745	13359	.	+	.	ID=gene-CYJ00_RS05970;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CYJ00_RS05970;old_locus_tag=CYJ00_005975
NZ_PJUS02000215.1	Protein Homology	CDS	12745	13359	.	+	0	ID=cds-WP_014612901.1;Parent=gene-CYJ00_RS05970;Dbxref=GenBank:WP_014612901.1;Name=WP_014612901.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=CYJ00_RS05970;product=ATP phosphoribosyltransferase;protein_id=WP_014612901.1;transl_table=11
NZ_PJUS02000215.1	RefSeq	gene	13349	13932	.	+	.	ID=gene-CYJ00_RS05975;Name=CYJ00_RS05975;end_range=13932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05975;old_locus_tag=CYJ00_005980;partial=true
NZ_PJUS02000215.1	Protein Homology	CDS	13349	13932	.	+	0	ID=cds-WP_198597683.1;Parent=gene-CYJ00_RS05975;Dbxref=GenBank:WP_198597683.1;Name=WP_198597683.1;Ontology_term=GO:0016616,GO:0046872,GO:0051287;end_range=13932,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=CYJ00_RS05975;partial=true;product=histidinol dehydrogenase;protein_id=WP_198597683.1;transl_table=11
##sequence-region NZ_PJUS02000260.1 1 2718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000260.1	RefSeq	region	1	2718	.	+	.	ID=NZ_PJUS02000260.1:1..2718;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000260.1	RefSeq	pseudogene	1	462	.	+	.	ID=gene-CYJ00_RS07070;Name=CYJ00_RS07070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS07070;old_locus_tag=CYJ00_007075;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000260.1	Protein Homology	CDS	1	462	.	+	0	ID=cds-CYJ00_RS07070;Parent=gene-CYJ00_RS07070;Note=in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=CYJ00_RS07070;partial=true;product=ribosome biogenesis GTPase YqeH;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000260.1	RefSeq	gene	478	1290	.	+	.	ID=gene-CYJ00_RS07075;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07075;old_locus_tag=CYJ00_007080
NZ_PJUS02000260.1	Protein Homology	CDS	478	1290	.	+	0	ID=cds-WP_101457976.1;Parent=gene-CYJ00_RS07075;Dbxref=GenBank:WP_101457976.1;Name=WP_101457976.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219754.1;locus_tag=CYJ00_RS07075;product=shikimate dehydrogenase;protein_id=WP_101457976.1;transl_table=11
NZ_PJUS02000260.1	RefSeq	gene	1301	1594	.	+	.	ID=gene-CYJ00_RS07080;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CYJ00_RS07080;old_locus_tag=CYJ00_007085
NZ_PJUS02000260.1	Protein Homology	CDS	1301	1594	.	+	0	ID=cds-WP_014613762.1;Parent=gene-CYJ00_RS07080;Dbxref=GenBank:WP_014613762.1;Name=WP_014613762.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169726.1;locus_tag=CYJ00_RS07080;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_014613762.1;transl_table=11
NZ_PJUS02000260.1	RefSeq	gene	1597	2178	.	+	.	ID=gene-CYJ00_RS07085;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07085;old_locus_tag=CYJ00_007090
NZ_PJUS02000260.1	Protein Homology	CDS	1597	2178	.	+	0	ID=cds-WP_014613763.1;Parent=gene-CYJ00_RS07085;Dbxref=GenBank:WP_014613763.1;Name=WP_014613763.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=CYJ00_RS07085;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_014613763.1;transl_table=11
NZ_PJUS02000260.1	RefSeq	gene	2156	2718	.	+	.	ID=gene-CYJ00_RS07090;Name=yqeK;end_range=2718,.;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=CYJ00_RS07090;old_locus_tag=CYJ00_007095;partial=true
NZ_PJUS02000260.1	Protein Homology	CDS	2156	2718	.	+	0	ID=cds-WP_101457977.1;Parent=gene-CYJ00_RS07090;Dbxref=GenBank:WP_101457977.1;Name=WP_101457977.1;end_range=2718,.;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613764.1;locus_tag=CYJ00_RS07090;partial=true;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_101457977.1;transl_table=11
##sequence-region NZ_PJUS02000374.1 1 3077
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000374.1	RefSeq	region	1	3077	.	+	.	ID=NZ_PJUS02000374.1:1..3077;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000374.1	RefSeq	gene	35	319	.	+	.	ID=gene-CYJ00_RS11185;Name=CYJ00_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11185;old_locus_tag=CYJ00_011190
NZ_PJUS02000374.1	Protein Homology	CDS	35	319	.	+	0	ID=cds-WP_233509786.1;Parent=gene-CYJ00_RS11185;Dbxref=GenBank:WP_233509786.1;Name=WP_233509786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.7;locus_tag=CYJ00_RS11185;product=YolD-like family protein;protein_id=WP_233509786.1;transl_table=11
NZ_PJUS02000374.1	RefSeq	gene	466	1068	.	-	.	ID=gene-CYJ00_RS11190;Name=CYJ00_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11190;old_locus_tag=CYJ00_011195
NZ_PJUS02000374.1	Protein Homology	CDS	466	1068	.	-	0	ID=cds-WP_014614327.1;Parent=gene-CYJ00_RS11190;Dbxref=GenBank:WP_014614327.1;Name=WP_014614327.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=CYJ00_RS11190;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_014614327.1;transl_table=11
NZ_PJUS02000374.1	RefSeq	gene	1075	1260	.	-	.	ID=gene-CYJ00_RS11195;Name=CYJ00_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11195;old_locus_tag=CYJ00_011200
NZ_PJUS02000374.1	Protein Homology	CDS	1075	1260	.	-	0	ID=cds-WP_014614328.1;Parent=gene-CYJ00_RS11195;Dbxref=GenBank:WP_014614328.1;Name=WP_014614328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=CYJ00_RS11195;product=YkvS family protein;protein_id=WP_014614328.1;transl_table=11
NZ_PJUS02000374.1	RefSeq	gene	1448	2440	.	+	.	ID=gene-CYJ00_RS11200;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=CYJ00_RS11200;old_locus_tag=CYJ00_011205
NZ_PJUS02000374.1	Protein Homology	CDS	1448	2440	.	+	0	ID=cds-WP_063284628.1;Parent=gene-CYJ00_RS11200;Dbxref=GenBank:WP_063284628.1;Name=WP_063284628.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=CYJ00_RS11200;product=lipoate--protein ligase;protein_id=WP_063284628.1;transl_table=11
NZ_PJUS02000374.1	RefSeq	gene	2662	2880	.	-	.	ID=gene-CYJ00_RS11205;Name=CYJ00_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11205;old_locus_tag=CYJ00_011210
NZ_PJUS02000374.1	Protein Homology	CDS	2662	2880	.	-	0	ID=cds-WP_014614330.1;Parent=gene-CYJ00_RS11205;Dbxref=GenBank:WP_014614330.1;Name=WP_014614330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=CYJ00_RS11205;product=IDEAL domain-containing protein;protein_id=WP_014614330.1;transl_table=11
##sequence-region NZ_PJUS02000006.1 1 2751
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000006.1	RefSeq	region	1	2751	.	+	.	ID=NZ_PJUS02000006.1:1..2751;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000006.1	RefSeq	gene	68	235	.	+	.	ID=gene-CYJ00_RS00210;Name=CYJ00_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00210;old_locus_tag=CYJ00_000210
NZ_PJUS02000006.1	Protein Homology	CDS	68	235	.	+	0	ID=cds-WP_001803271.1;Parent=gene-CYJ00_RS00210;Dbxref=GenBank:WP_001803271.1;Name=WP_001803271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.7;locus_tag=CYJ00_RS00210;product=cysteine-rich KTR domain-containing protein;protein_id=WP_001803271.1;transl_table=11
NZ_PJUS02000006.1	RefSeq	gene	293	646	.	-	.	ID=gene-CYJ00_RS00215;Name=CYJ00_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00215;old_locus_tag=CYJ00_000215
NZ_PJUS02000006.1	Protein Homology	CDS	293	646	.	-	0	ID=cds-WP_001227349.1;Parent=gene-CYJ00_RS00215;Dbxref=GenBank:WP_001227349.1;Name=WP_001227349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227349.1;locus_tag=CYJ00_RS00215;product=helix-turn-helix transcriptional regulator;protein_id=WP_001227349.1;transl_table=11
NZ_PJUS02000006.1	RefSeq	gene	1178	1600	.	+	.	ID=gene-CYJ00_RS00220;Name=CYJ00_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00220;old_locus_tag=CYJ00_000220
NZ_PJUS02000006.1	Protein Homology	CDS	1178	1600	.	+	0	ID=cds-WP_000804878.1;Parent=gene-CYJ00_RS00220;Dbxref=GenBank:WP_000804878.1;Name=WP_000804878.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804881.1;locus_tag=CYJ00_RS00220;product=RNA polymerase sigma factor;protein_id=WP_000804878.1;transl_table=11
NZ_PJUS02000006.1	RefSeq	gene	1597	1827	.	+	.	ID=gene-CYJ00_RS00225;Name=CYJ00_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00225;old_locus_tag=CYJ00_000225
NZ_PJUS02000006.1	Protein Homology	CDS	1597	1827	.	+	0	ID=cds-WP_000845144.1;Parent=gene-CYJ00_RS00225;Dbxref=GenBank:WP_000845144.1;Name=WP_000845144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317542.1;locus_tag=CYJ00_RS00225;product=helix-turn-helix domain-containing protein;protein_id=WP_000845144.1;transl_table=11
NZ_PJUS02000006.1	RefSeq	gene	2323	2523	.	+	.	ID=gene-CYJ00_RS00235;Name=CYJ00_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00235;old_locus_tag=CYJ00_000235
NZ_PJUS02000006.1	Protein Homology	CDS	2323	2523	.	+	0	ID=cds-WP_000633909.1;Parent=gene-CYJ00_RS00235;Dbxref=GenBank:WP_000633909.1;Name=WP_000633909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633907.1;locus_tag=CYJ00_RS00235;product=DUF3173 domain-containing protein;protein_id=WP_000633909.1;transl_table=11
NZ_PJUS02000006.1	RefSeq	gene	2550	2751	.	+	.	ID=gene-CYJ00_RS00240;Name=CYJ00_RS00240;end_range=2751,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00240;old_locus_tag=CYJ00_000240;partial=true
NZ_PJUS02000006.1	Protein Homology	CDS	2550	2751	.	+	0	ID=cds-WP_198597662.1;Parent=gene-CYJ00_RS00240;Dbxref=GenBank:WP_198597662.1;Name=WP_198597662.1;end_range=2751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388733.1;locus_tag=CYJ00_RS00240;partial=true;product=Arm DNA-binding domain-containing protein;protein_id=WP_198597662.1;transl_table=11
##sequence-region NZ_PJUS02000121.1 1 2337
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000121.1	RefSeq	region	1	2337	.	+	.	ID=NZ_PJUS02000121.1:1..2337;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000121.1	RefSeq	gene	200	1843	.	+	.	ID=gene-CYJ00_RS03445;Name=CYJ00_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03445;old_locus_tag=CYJ00_003450
NZ_PJUS02000121.1	Protein Homology	CDS	200	1843	.	+	0	ID=cds-WP_165443205.1;Parent=gene-CYJ00_RS03445;Dbxref=GenBank:WP_165443205.1;Name=WP_165443205.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614307.1;locus_tag=CYJ00_RS03445;product=phospho-sugar mutase;protein_id=WP_165443205.1;transl_table=11
##sequence-region NZ_PJUS02000247.1 1 2120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000247.1	RefSeq	region	1	2120	.	+	.	ID=NZ_PJUS02000247.1:1..2120;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000247.1	RefSeq	gene	66	1592	.	+	.	ID=gene-CYJ00_RS06800;Name=CYJ00_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06800;old_locus_tag=CYJ00_006805
NZ_PJUS02000247.1	Protein Homology	CDS	66	1592	.	+	0	ID=cds-WP_015729534.1;Parent=gene-CYJ00_RS06800;Dbxref=GenBank:WP_015729534.1;Name=WP_015729534.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220283.1;locus_tag=CYJ00_RS06800;product=sodium:solute symporter family protein;protein_id=WP_015729534.1;transl_table=11
##sequence-region NZ_PJUS02000333.1 1 2896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000333.1	RefSeq	region	1	2896	.	+	.	ID=NZ_PJUS02000333.1:1..2896;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000333.1	RefSeq	gene	13	1464	.	+	.	ID=gene-CYJ00_RS10280;Name=CYJ00_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10280;old_locus_tag=CYJ00_010290
NZ_PJUS02000333.1	Protein Homology	CDS	13	1464	.	+	0	ID=cds-WP_014613995.1;Parent=gene-CYJ00_RS10280;Dbxref=GenBank:WP_014613995.1;Name=WP_014613995.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167754.1;locus_tag=CYJ00_RS10280;product=amino acid permease;protein_id=WP_014613995.1;transl_table=11
NZ_PJUS02000333.1	RefSeq	gene	1638	1952	.	+	.	ID=gene-CYJ00_RS10285;Name=CYJ00_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10285;old_locus_tag=CYJ00_010295
NZ_PJUS02000333.1	Protein Homology	CDS	1638	1952	.	+	0	ID=cds-WP_014613996.1;Parent=gene-CYJ00_RS10285;Dbxref=GenBank:WP_014613996.1;Name=WP_014613996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=CYJ00_RS10285;product=hypothetical protein;protein_id=WP_014613996.1;transl_table=11
NZ_PJUS02000333.1	RefSeq	gene	2106	2882	.	-	.	ID=gene-CYJ00_RS10290;Name=CYJ00_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10290;old_locus_tag=CYJ00_010300
NZ_PJUS02000333.1	Protein Homology	CDS	2106	2882	.	-	0	ID=cds-WP_241956995.1;Parent=gene-CYJ00_RS10290;Dbxref=GenBank:WP_241956995.1;Name=WP_241956995.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424995.1;locus_tag=CYJ00_RS10290;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_241956995.1;transl_table=11
##sequence-region NZ_PJUS02000210.1 1 2734
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000210.1	RefSeq	region	1	2734	.	+	.	ID=NZ_PJUS02000210.1:1..2734;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000210.1	RefSeq	pseudogene	1	693	.	-	.	ID=gene-CYJ00_RS05855;Name=CYJ00_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05855;old_locus_tag=CYJ00_005860;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000210.1	Protein Homology	CDS	1	693	.	-	0	ID=cds-CYJ00_RS05855;Parent=gene-CYJ00_RS05855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476530.1;locus_tag=CYJ00_RS05855;partial=true;product=oligoendopeptidase F;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000210.1	RefSeq	gene	767	1732	.	-	.	ID=gene-CYJ00_RS05860;Name=CYJ00_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05860;old_locus_tag=CYJ00_005865
NZ_PJUS02000210.1	Protein Homology	CDS	767	1732	.	-	0	ID=cds-WP_101457979.1;Parent=gene-CYJ00_RS05860;Dbxref=GenBank:WP_101457979.1;Name=WP_101457979.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728885.1;locus_tag=CYJ00_RS05860;product=competence protein CoiA;protein_id=WP_101457979.1;transl_table=11
NZ_PJUS02000210.1	RefSeq	gene	2006	2665	.	-	.	ID=gene-CYJ00_RS05865;Name=spsR;gbkey=Gene;gene=spsR;gene_biotype=protein_coding;locus_tag=CYJ00_RS05865;old_locus_tag=CYJ00_005870
NZ_PJUS02000210.1	Protein Homology	CDS	2006	2665	.	-	0	ID=cds-WP_101457980.1;Parent=gene-CYJ00_RS05865;Dbxref=GenBank:WP_101457980.1;Name=WP_101457980.1;gbkey=CDS;gene=spsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614371.1;locus_tag=CYJ00_RS05865;product=LPXTG-anchored surface protein SpsR;protein_id=WP_101457980.1;transl_table=11
##sequence-region NZ_PJUS02000284.1 1 2763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000284.1	RefSeq	region	1	2763	.	+	.	ID=NZ_PJUS02000284.1:1..2763;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000284.1	RefSeq	gene	205	1419	.	-	.	ID=gene-CYJ00_RS07625;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07625;old_locus_tag=CYJ00_007630
NZ_PJUS02000284.1	Protein Homology	CDS	205	1419	.	-	0	ID=cds-WP_015729358.1;Parent=gene-CYJ00_RS07625;Dbxref=GenBank:WP_015729358.1;Name=WP_015729358.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=CYJ00_RS07625;product=ABC transporter permease EcsB;protein_id=WP_015729358.1;transl_table=11
NZ_PJUS02000284.1	RefSeq	gene	1416	2153	.	-	.	ID=gene-CYJ00_RS07630;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07630;old_locus_tag=CYJ00_007635
NZ_PJUS02000284.1	Protein Homology	CDS	1416	2153	.	-	0	ID=cds-WP_014613554.1;Parent=gene-CYJ00_RS07630;Dbxref=GenBank:WP_014613554.1;Name=WP_014613554.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168023.1;locus_tag=CYJ00_RS07630;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_014613554.1;transl_table=11
NZ_PJUS02000284.1	RefSeq	gene	2289	2714	.	+	.	ID=gene-CYJ00_RS07635;Name=CYJ00_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07635;old_locus_tag=CYJ00_007640
NZ_PJUS02000284.1	Protein Homology	CDS	2289	2714	.	+	0	ID=cds-WP_063279146.1;Parent=gene-CYJ00_RS07635;Dbxref=GenBank:WP_063279146.1;Name=WP_063279146.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=CYJ00_RS07635;product=HIT family protein;protein_id=WP_063279146.1;transl_table=11
##sequence-region NZ_PJUS02000389.1 1 2701
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000389.1	RefSeq	region	1	2701	.	+	.	ID=NZ_PJUS02000389.1:1..2701;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000389.1	RefSeq	gene	346	807	.	-	.	ID=gene-CYJ00_RS11505;Name=CYJ00_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11505;old_locus_tag=CYJ00_011510
NZ_PJUS02000389.1	Protein Homology	CDS	346	807	.	-	0	ID=cds-WP_014614224.1;Parent=gene-CYJ00_RS11505;Dbxref=GenBank:WP_014614224.1;Name=WP_014614224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=CYJ00_RS11505;product=DUF420 domain-containing protein;protein_id=WP_014614224.1;transl_table=11
NZ_PJUS02000389.1	RefSeq	gene	835	1746	.	-	.	ID=gene-CYJ00_RS11510;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CYJ00_RS11510;old_locus_tag=CYJ00_011515
NZ_PJUS02000389.1	Protein Homology	CDS	835	1746	.	-	0	ID=cds-WP_096533598.1;Parent=gene-CYJ00_RS11510;Dbxref=GenBank:WP_096533598.1;Name=WP_096533598.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276112.1;locus_tag=CYJ00_RS11510;product=heme o synthase;protein_id=WP_096533598.1;transl_table=11
NZ_PJUS02000389.1	RefSeq	gene	1958	2701	.	+	.	ID=gene-CYJ00_RS11515;Name=CYJ00_RS11515;end_range=2701,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11515;old_locus_tag=CYJ00_011520;partial=true
NZ_PJUS02000389.1	Protein Homology	CDS	1958	2701	.	+	0	ID=cds-WP_101457981.1;Parent=gene-CYJ00_RS11515;Dbxref=GenBank:WP_101457981.1;Name=WP_101457981.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;end_range=2701,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728962.1;locus_tag=CYJ00_RS11515;partial=true;product=COX15/CtaA family protein;protein_id=WP_101457981.1;transl_table=11
##sequence-region NZ_PJUS02000334.1 1 2250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000334.1	RefSeq	region	1	2250	.	+	.	ID=NZ_PJUS02000334.1:1..2250;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000334.1	RefSeq	gene	1	883	.	+	.	ID=gene-CYJ00_RS10295;Name=CYJ00_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10295;old_locus_tag=CYJ00_010305;partial=true;start_range=.,1
NZ_PJUS02000334.1	Protein Homology	CDS	1	883	.	+	1	ID=cds-WP_101457982.1;Parent=gene-CYJ00_RS10295;Dbxref=GenBank:WP_101457982.1;Name=WP_101457982.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729425.1;locus_tag=CYJ00_RS10295;partial=true;product=MFS transporter;protein_id=WP_101457982.1;start_range=.,1;transl_table=11
NZ_PJUS02000334.1	RefSeq	gene	953	2221	.	-	.	ID=gene-CYJ00_RS10300;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10300;old_locus_tag=CYJ00_010310
NZ_PJUS02000334.1	Protein Homology	CDS	953	2221	.	-	0	ID=cds-WP_014613387.1;Parent=gene-CYJ00_RS10300;Dbxref=GenBank:WP_014613387.1;Name=WP_014613387.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CYJ00_RS10300;product=threonine ammonia-lyase IlvA;protein_id=WP_014613387.1;transl_table=11
##sequence-region NZ_PJUS02000320.1 1 13464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000320.1	RefSeq	region	1	13464	.	+	.	ID=NZ_PJUS02000320.1:1..13464;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000320.1	RefSeq	gene	161	1759	.	+	.	ID=gene-CYJ00_RS08550;Name=CYJ00_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08550;old_locus_tag=CYJ00_008555
NZ_PJUS02000320.1	Protein Homology	CDS	161	1759	.	+	0	ID=cds-WP_015729598.1;Parent=gene-CYJ00_RS08550;Dbxref=GenBank:WP_015729598.1;Name=WP_015729598.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729598.1;locus_tag=CYJ00_RS08550;product=M20 family metallopeptidase;protein_id=WP_015729598.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	1873	3051	.	-	.	ID=gene-CYJ00_RS08555;Name=CYJ00_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08555;old_locus_tag=CYJ00_008560
NZ_PJUS02000320.1	Protein Homology	CDS	1873	3051	.	-	0	ID=cds-WP_014613064.1;Parent=gene-CYJ00_RS08555;Dbxref=GenBank:WP_014613064.1;Name=WP_014613064.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613064.1;locus_tag=CYJ00_RS08555;product=nitrate/nitrite transporter;protein_id=WP_014613064.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	pseudogene	3301	3459	.	-	.	ID=gene-CYJ00_RS13960;Name=CYJ00_RS13960;end_range=3459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13960;old_locus_tag=CYJ00_008565;partial=true;pseudo=true
NZ_PJUS02000320.1	Protein Homology	CDS	3301	3459	.	-	0	ID=cds-CYJ00_RS13960;Parent=gene-CYJ00_RS13960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3459,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020567.8;locus_tag=CYJ00_RS13960;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	4459	5109	.	-	.	ID=gene-CYJ00_RS08565;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=CYJ00_RS08565;old_locus_tag=CYJ00_008570
NZ_PJUS02000320.1	Protein Homology	CDS	4459	5109	.	-	0	ID=cds-WP_014613059.1;Parent=gene-CYJ00_RS08565;Dbxref=GenBank:WP_014613059.1;Name=WP_014613059.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=CYJ00_RS08565;product=nitrate respiration regulation response regulator NreC;protein_id=WP_014613059.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	5128	6162	.	-	.	ID=gene-CYJ00_RS08570;Name=CYJ00_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08570;old_locus_tag=CYJ00_008575
NZ_PJUS02000320.1	Protein Homology	CDS	5128	6162	.	-	0	ID=cds-WP_014613058.1;Parent=gene-CYJ00_RS08570;Dbxref=GenBank:WP_014613058.1;Name=WP_014613058.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613058.1;locus_tag=CYJ00_RS08570;product=sensor histidine kinase;protein_id=WP_014613058.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	6162	6623	.	-	.	ID=gene-CYJ00_RS08575;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08575;old_locus_tag=CYJ00_008580
NZ_PJUS02000320.1	Protein Homology	CDS	6162	6623	.	-	0	ID=cds-WP_014613057.1;Parent=gene-CYJ00_RS08575;Dbxref=GenBank:WP_014613057.1;Name=WP_014613057.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613057.1;locus_tag=CYJ00_RS08575;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_014613057.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	6639	7316	.	-	.	ID=gene-CYJ00_RS08580;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CYJ00_RS08580;old_locus_tag=CYJ00_008585
NZ_PJUS02000320.1	Protein Homology	CDS	6639	7316	.	-	0	ID=cds-WP_014613056.1;Parent=gene-CYJ00_RS08580;Dbxref=GenBank:WP_014613056.1;Name=WP_014613056.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=CYJ00_RS08580;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014613056.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	7309	7884	.	-	.	ID=gene-CYJ00_RS08585;Name=CYJ00_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08585;old_locus_tag=CYJ00_008590
NZ_PJUS02000320.1	Protein Homology	CDS	7309	7884	.	-	0	ID=cds-WP_014613055.1;Parent=gene-CYJ00_RS08585;Dbxref=GenBank:WP_014613055.1;Name=WP_014613055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=CYJ00_RS08585;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014613055.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	7877	9433	.	-	.	ID=gene-CYJ00_RS08590;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CYJ00_RS08590;old_locus_tag=CYJ00_008595
NZ_PJUS02000320.1	Protein Homology	CDS	7877	9433	.	-	0	ID=cds-WP_101457698.1;Parent=gene-CYJ00_RS08590;Dbxref=GenBank:WP_101457698.1;Name=WP_101457698.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=CYJ00_RS08590;product=nitrate reductase subunit beta;protein_id=WP_101457698.1;transl_table=11
NZ_PJUS02000320.1	RefSeq	gene	9423	13094	.	-	.	ID=gene-CYJ00_RS08595;Name=CYJ00_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08595;old_locus_tag=CYJ00_008600
NZ_PJUS02000320.1	Protein Homology	CDS	9423	13094	.	-	0	ID=cds-WP_101457699.1;Parent=gene-CYJ00_RS08595;Dbxref=GenBank:WP_101457699.1;Name=WP_101457699.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CYJ00_RS08595;product=nitrate reductase subunit alpha;protein_id=WP_101457699.1;transl_table=11
##sequence-region NZ_PJUS02000228.1 1 2900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000228.1	RefSeq	region	1	2900	.	+	.	ID=NZ_PJUS02000228.1:1..2900;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000228.1	RefSeq	gene	178	1092	.	-	.	ID=gene-CYJ00_RS06260;Name=CYJ00_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06260;old_locus_tag=CYJ00_006265
NZ_PJUS02000228.1	Protein Homology	CDS	178	1092	.	-	0	ID=cds-WP_014614890.1;Parent=gene-CYJ00_RS06260;Dbxref=GenBank:WP_014614890.1;Name=WP_014614890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614890.1;locus_tag=CYJ00_RS06260;product=TDT family transporter;protein_id=WP_014614890.1;transl_table=11
NZ_PJUS02000228.1	RefSeq	gene	1502	2332	.	-	.	ID=gene-CYJ00_RS06265;Name=CYJ00_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06265;old_locus_tag=CYJ00_006270
NZ_PJUS02000228.1	Protein Homology	CDS	1502	2332	.	-	0	ID=cds-WP_070407287.1;Parent=gene-CYJ00_RS06265;Dbxref=GenBank:WP_070407287.1;Name=WP_070407287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614889.1;locus_tag=CYJ00_RS06265;product=thermonuclease family protein;protein_id=WP_070407287.1;transl_table=11
##sequence-region NZ_PJUS02000111.1 1 2319
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000111.1	RefSeq	region	1	2319	.	+	.	ID=NZ_PJUS02000111.1:1..2319;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000111.1	RefSeq	gene	1	599	.	-	.	ID=gene-CYJ00_RS03210;Name=CYJ00_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03210;old_locus_tag=CYJ00_003215;partial=true;start_range=.,1
NZ_PJUS02000111.1	Protein Homology	CDS	1	599	.	-	0	ID=cds-WP_101457984.1;Parent=gene-CYJ00_RS03210;Dbxref=GenBank:WP_101457984.1;Name=WP_101457984.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166671.1;locus_tag=CYJ00_RS03210;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_101457984.1;start_range=.,1;transl_table=11
NZ_PJUS02000111.1	RefSeq	gene	599	2319	.	-	.	ID=gene-CYJ00_RS03215;Name=CYJ00_RS03215;end_range=2319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03215;old_locus_tag=CYJ00_003220;partial=true
NZ_PJUS02000111.1	Protein Homology	CDS	599	2319	.	-	2	ID=cds-WP_101457983.1;Parent=gene-CYJ00_RS03215;Dbxref=GenBank:WP_101457983.1;Name=WP_101457983.1;end_range=2319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166672.1;locus_tag=CYJ00_RS03215;partial=true;product=amino acid ABC transporter permease;protein_id=WP_101457983.1;transl_table=11
##sequence-region NZ_PJUS02000426.1 1 2087
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000426.1	RefSeq	region	1	2087	.	+	.	ID=NZ_PJUS02000426.1:1..2087;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000426.1	RefSeq	gene	109	552	.	-	.	ID=gene-CYJ00_RS12595;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS12595;old_locus_tag=CYJ00_012600
NZ_PJUS02000426.1	Protein Homology	CDS	109	552	.	-	0	ID=cds-WP_014613353.1;Parent=gene-CYJ00_RS12595;Dbxref=GenBank:WP_014613353.1;Name=WP_014613353.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426460.1;locus_tag=CYJ00_RS12595;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_014613353.1;transl_table=11
NZ_PJUS02000426.1	RefSeq	gene	552	749	.	-	.	ID=gene-CYJ00_RS12600;Name=CYJ00_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12600;old_locus_tag=CYJ00_012605
NZ_PJUS02000426.1	Protein Homology	CDS	552	749	.	-	0	ID=cds-WP_226957593.1;Parent=gene-CYJ00_RS12600;Dbxref=GenBank:WP_226957593.1;Name=WP_226957593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=CYJ00_RS12600;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_226957593.1;transl_table=11
NZ_PJUS02000426.1	RefSeq	gene	742	2007	.	-	.	ID=gene-CYJ00_RS12605;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12605;old_locus_tag=CYJ00_012610
NZ_PJUS02000426.1	Protein Homology	CDS	742	2007	.	-	0	ID=cds-WP_099986637.1;Parent=gene-CYJ00_RS12605;Dbxref=GenBank:WP_099986637.1;Name=WP_099986637.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=CYJ00_RS12605;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_099986637.1;transl_table=11
##sequence-region NZ_PJUS02000311.1 1 287
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000311.1	RefSeq	region	1	287	.	+	.	ID=NZ_PJUS02000311.1:1..287;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000311.1	RefSeq	gene	41	287	.	+	.	ID=gene-CYJ00_RS13480;Name=CYJ00_RS13480;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13480;partial=true
NZ_PJUS02000311.1	GeneMarkS-2+	CDS	41	287	.	+	0	ID=cds-WP_206748198.1;Parent=gene-CYJ00_RS13480;Dbxref=GenBank:WP_206748198.1;Name=WP_206748198.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13480;partial=true;product=hypothetical protein;protein_id=WP_206748198.1;transl_table=11
##sequence-region NZ_PJUS02000134.1 1 2381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000134.1	RefSeq	region	1	2381	.	+	.	ID=NZ_PJUS02000134.1:1..2381;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000134.1	RefSeq	gene	121	549	.	-	.	ID=gene-CYJ00_RS03725;Name=CYJ00_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03725;old_locus_tag=CYJ00_003730
NZ_PJUS02000134.1	Protein Homology	CDS	121	549	.	-	0	ID=cds-WP_096533227.1;Parent=gene-CYJ00_RS03725;Dbxref=GenBank:WP_096533227.1;Name=WP_096533227.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614311.1;locus_tag=CYJ00_RS03725;product=GNAT family N-acetyltransferase;protein_id=WP_096533227.1;transl_table=11
NZ_PJUS02000134.1	RefSeq	gene	744	1214	.	-	.	ID=gene-CYJ00_RS03730;Name=CYJ00_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03730;old_locus_tag=CYJ00_003735
NZ_PJUS02000134.1	Protein Homology	CDS	744	1214	.	-	0	ID=cds-WP_065354434.1;Parent=gene-CYJ00_RS03730;Dbxref=GenBank:WP_065354434.1;Name=WP_065354434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=CYJ00_RS03730;product=DUF2538 family protein;protein_id=WP_065354434.1;transl_table=11
NZ_PJUS02000134.1	RefSeq	gene	1229	2381	.	-	.	ID=gene-CYJ00_RS03735;Name=CYJ00_RS03735;end_range=2381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03735;old_locus_tag=CYJ00_003740;partial=true
NZ_PJUS02000134.1	Protein Homology	CDS	1229	2381	.	-	1	ID=cds-WP_101457985.1;Parent=gene-CYJ00_RS03735;Dbxref=GenBank:WP_101457985.1;Name=WP_101457985.1;Ontology_term=GO:0070726;end_range=2381,.;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220253.1;locus_tag=CYJ00_RS03735;partial=true;product=LCP family protein;protein_id=WP_101457985.1;transl_table=11
##sequence-region NZ_PJUS02000246.1 1 2687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000246.1	RefSeq	region	1	2687	.	+	.	ID=NZ_PJUS02000246.1:1..2687;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000246.1	RefSeq	gene	1	570	.	+	.	ID=gene-CYJ00_RS06775;Name=CYJ00_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06775;old_locus_tag=CYJ00_006780;partial=true;start_range=.,1
NZ_PJUS02000246.1	Protein Homology	CDS	1	570	.	+	0	ID=cds-WP_241956946.1;Parent=gene-CYJ00_RS06775;Dbxref=GenBank:WP_241956946.1;Name=WP_241956946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048762.2;locus_tag=CYJ00_RS06775;partial=true;product=phage upper tail fiber protein;protein_id=WP_241956946.1;start_range=.,1;transl_table=11
NZ_PJUS02000246.1	RefSeq	gene	582	980	.	+	.	ID=gene-CYJ00_RS06780;Name=CYJ00_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06780;old_locus_tag=CYJ00_006785
NZ_PJUS02000246.1	GeneMarkS-2+	CDS	582	980	.	+	0	ID=cds-WP_014613520.1;Parent=gene-CYJ00_RS06780;Dbxref=GenBank:WP_014613520.1;Name=WP_014613520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS06780;product=hypothetical protein;protein_id=WP_014613520.1;transl_table=11
NZ_PJUS02000246.1	RefSeq	gene	1020	1211	.	+	.	ID=gene-CYJ00_RS06785;Name=CYJ00_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06785;old_locus_tag=CYJ00_006790
NZ_PJUS02000246.1	Protein Homology	CDS	1020	1211	.	+	0	ID=cds-WP_014613521.1;Parent=gene-CYJ00_RS06785;Dbxref=GenBank:WP_014613521.1;Name=WP_014613521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613521.1;locus_tag=CYJ00_RS06785;product=hypothetical protein;protein_id=WP_014613521.1;transl_table=11
NZ_PJUS02000246.1	RefSeq	pseudogene	1751	2674	.	+	.	ID=gene-CYJ00_RS06795;Name=CYJ00_RS06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06795;old_locus_tag=CYJ00_006800;pseudo=true
NZ_PJUS02000246.1	Protein Homology	CDS	1751	2674	.	+	0	ID=cds-CYJ00_RS06795;Parent=gene-CYJ00_RS06795;Note=internal stop;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458419.1;locus_tag=CYJ00_RS06795;product=peptidoglycan recognition protein family protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000358.1 1 3201
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000358.1	RefSeq	region	1	3201	.	+	.	ID=NZ_PJUS02000358.1:1..3201;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000358.1	RefSeq	gene	101	1276	.	-	.	ID=gene-CYJ00_RS10835;Name=CYJ00_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10835;old_locus_tag=CYJ00_010840
NZ_PJUS02000358.1	Protein Homology	CDS	101	1276	.	-	0	ID=cds-WP_100002797.1;Parent=gene-CYJ00_RS10835;Dbxref=GenBank:WP_100002797.1;Name=WP_100002797.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612689.1;locus_tag=CYJ00_RS10835;product=DUF418 domain-containing protein;protein_id=WP_100002797.1;transl_table=11
NZ_PJUS02000358.1	RefSeq	pseudogene	1423	2602	.	+	.	ID=gene-CYJ00_RS10840;Name=CYJ00_RS10840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10840;old_locus_tag=CYJ00_010845;pseudo=true
NZ_PJUS02000358.1	Protein Homology	CDS	1423	2602	.	+	0	ID=cds-CYJ00_RS10840;Parent=gene-CYJ00_RS10840;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_336253575.1;locus_tag=CYJ00_RS10840;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PJUS02000358.1	RefSeq	pseudogene	2698	3110	.	+	.	ID=gene-CYJ00_RS10845;Name=CYJ00_RS10845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10845;old_locus_tag=CYJ00_010850;partial=true;pseudo=true;start_range=.,2698
NZ_PJUS02000358.1	Protein Homology	CDS	2698	3110	.	+	0	ID=cds-CYJ00_RS10845;Parent=gene-CYJ00_RS10845;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=CYJ00_RS10845;partial=true;product=DUF1643 domain-containing protein;pseudo=true;start_range=.,2698;transl_table=11
##sequence-region NZ_PJUS02000376.1 1 11371
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000376.1	RefSeq	region	1	11371	.	+	.	ID=NZ_PJUS02000376.1:1..11371;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000376.1	RefSeq	gene	3	1088	.	+	.	ID=gene-CYJ00_RS11215;Name=CYJ00_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11215;old_locus_tag=CYJ00_011220
NZ_PJUS02000376.1	Protein Homology	CDS	3	1088	.	+	0	ID=cds-WP_101457700.1;Parent=gene-CYJ00_RS11215;Dbxref=GenBank:WP_101457700.1;Name=WP_101457700.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220248.1;locus_tag=CYJ00_RS11215;product=PLP-dependent transferase;protein_id=WP_101457700.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	1075	2250	.	+	.	ID=gene-CYJ00_RS11220;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CYJ00_RS11220;old_locus_tag=CYJ00_011225
NZ_PJUS02000376.1	Protein Homology	CDS	1075	2250	.	+	0	ID=cds-WP_101457701.1;Parent=gene-CYJ00_RS11220;Dbxref=GenBank:WP_101457701.1;Name=WP_101457701.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728512.1;locus_tag=CYJ00_RS11220;product=cystathionine beta-lyase MetC;protein_id=WP_101457701.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	2204	4045	.	+	.	ID=gene-CYJ00_RS11225;Name=CYJ00_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11225;old_locus_tag=CYJ00_011230
NZ_PJUS02000376.1	Protein Homology	CDS	2204	4045	.	+	0	ID=cds-WP_014614936.1;Parent=gene-CYJ00_RS11225;Dbxref=GenBank:WP_014614936.1;Name=WP_014614936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=CYJ00_RS11225;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_014614936.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	4039	6282	.	+	.	ID=gene-CYJ00_RS11230;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CYJ00_RS11230;old_locus_tag=CYJ00_011235
NZ_PJUS02000376.1	Protein Homology	CDS	4039	6282	.	+	0	ID=cds-WP_101457702.1;Parent=gene-CYJ00_RS11230;Dbxref=GenBank:WP_101457702.1;Name=WP_101457702.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166028.1;locus_tag=CYJ00_RS11230;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_101457702.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	6840	7745	.	-	.	ID=gene-CYJ00_RS11235;Name=CYJ00_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11235;old_locus_tag=CYJ00_011240
NZ_PJUS02000376.1	Protein Homology	CDS	6840	7745	.	-	0	ID=cds-WP_014613300.1;Parent=gene-CYJ00_RS11235;Dbxref=GenBank:WP_014613300.1;Name=WP_014613300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169555.1;locus_tag=CYJ00_RS11235;product=lytic transglycosylase;protein_id=WP_014613300.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	7931	8635	.	+	.	ID=gene-CYJ00_RS11240;Name=CYJ00_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11240;old_locus_tag=CYJ00_011245
NZ_PJUS02000376.1	Protein Homology	CDS	7931	8635	.	+	0	ID=cds-WP_014613301.1;Parent=gene-CYJ00_RS11240;Dbxref=GenBank:WP_014613301.1;Name=WP_014613301.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169556.1;locus_tag=CYJ00_RS11240;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613301.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	9042	9980	.	+	.	ID=gene-CYJ00_RS11245;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CYJ00_RS11245;old_locus_tag=CYJ00_011250
NZ_PJUS02000376.1	Protein Homology	CDS	9042	9980	.	+	0	ID=cds-WP_014613302.1;Parent=gene-CYJ00_RS11245;Dbxref=GenBank:WP_014613302.1;Name=WP_014613302.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=CYJ00_RS11245;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_014613302.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	9997	10233	.	+	.	ID=gene-CYJ00_RS11250;Name=CYJ00_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11250;old_locus_tag=CYJ00_011255
NZ_PJUS02000376.1	Protein Homology	CDS	9997	10233	.	+	0	ID=cds-WP_014613303.1;Parent=gene-CYJ00_RS11250;Dbxref=GenBank:WP_014613303.1;Name=WP_014613303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729458.1;locus_tag=CYJ00_RS11250;product=hypothetical protein;protein_id=WP_014613303.1;transl_table=11
NZ_PJUS02000376.1	RefSeq	gene	10311	11371	.	+	.	ID=gene-CYJ00_RS11255;Name=CYJ00_RS11255;end_range=11371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11255;old_locus_tag=CYJ00_011260;partial=true
NZ_PJUS02000376.1	Protein Homology	CDS	10311	11371	.	+	0	ID=cds-WP_101457703.1;Parent=gene-CYJ00_RS11255;Dbxref=GenBank:WP_101457703.1;Name=WP_101457703.1;end_range=11371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123390.1;locus_tag=CYJ00_RS11255;partial=true;product=EVE domain-containing protein;protein_id=WP_101457703.1;transl_table=11
##sequence-region NZ_PJUS02000257.1 1 2086
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000257.1	RefSeq	region	1	2086	.	+	.	ID=NZ_PJUS02000257.1:1..2086;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000257.1	RefSeq	gene	58	669	.	+	.	ID=gene-CYJ00_RS07050;Name=CYJ00_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07050;old_locus_tag=CYJ00_007055
NZ_PJUS02000257.1	Protein Homology	CDS	58	669	.	+	0	ID=cds-WP_014614237.1;Parent=gene-CYJ00_RS07050;Dbxref=GenBank:WP_014614237.1;Name=WP_014614237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=CYJ00_RS07050;product=YktB family protein;protein_id=WP_014614237.1;transl_table=11
NZ_PJUS02000257.1	RefSeq	gene	1353	2042	.	-	.	ID=gene-CYJ00_RS07055;Name=CYJ00_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07055;old_locus_tag=CYJ00_007060
NZ_PJUS02000257.1	Protein Homology	CDS	1353	2042	.	-	0	ID=cds-WP_063284570.1;Parent=gene-CYJ00_RS07055;Dbxref=GenBank:WP_063284570.1;Name=WP_063284570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220275.1;locus_tag=CYJ00_RS07055;product=DUF4064 domain-containing protein;protein_id=WP_063284570.1;transl_table=11
##sequence-region NZ_PJUS02000034.1 1 2353
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000034.1	RefSeq	region	1	2353	.	+	.	ID=NZ_PJUS02000034.1:1..2353;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000034.1	RefSeq	gene	1	198	.	+	.	ID=gene-CYJ00_RS13410;Name=CYJ00_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13410;old_locus_tag=CYJ00_001015;partial=true;start_range=.,1
NZ_PJUS02000034.1	GeneMarkS-2+	CDS	1	198	.	+	0	ID=cds-WP_206748189.1;Parent=gene-CYJ00_RS13410;Dbxref=GenBank:WP_206748189.1;Name=WP_206748189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13410;partial=true;product=hypothetical protein;protein_id=WP_206748189.1;start_range=.,1;transl_table=11
NZ_PJUS02000034.1	RefSeq	gene	685	1506	.	-	.	ID=gene-CYJ00_RS01020;Name=CYJ00_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01020;old_locus_tag=CYJ00_001020
NZ_PJUS02000034.1	Protein Homology	CDS	685	1506	.	-	0	ID=cds-WP_101457993.1;Parent=gene-CYJ00_RS01020;Dbxref=GenBank:WP_101457993.1;Name=WP_101457993.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219492.1;locus_tag=CYJ00_RS01020;product=metallophosphoesterase;protein_id=WP_101457993.1;transl_table=11
NZ_PJUS02000034.1	RefSeq	gene	1805	1984	.	-	.	ID=gene-CYJ00_RS01025;Name=CYJ00_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01025;old_locus_tag=CYJ00_001025
NZ_PJUS02000034.1	Protein Homology	CDS	1805	1984	.	-	0	ID=cds-WP_014613030.1;Parent=gene-CYJ00_RS01025;Dbxref=GenBank:WP_014613030.1;Name=WP_014613030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613030.1;locus_tag=CYJ00_RS01025;product=hypothetical protein;protein_id=WP_014613030.1;transl_table=11
##sequence-region NZ_PJUS02000110.1 1 2124
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000110.1	RefSeq	region	1	2124	.	+	.	ID=NZ_PJUS02000110.1:1..2124;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000110.1	RefSeq	gene	14	1255	.	+	.	ID=gene-CYJ00_RS03195;Name=CYJ00_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03195;old_locus_tag=CYJ00_003200
NZ_PJUS02000110.1	Protein Homology	CDS	14	1255	.	+	0	ID=cds-WP_101457997.1;Parent=gene-CYJ00_RS03195;Dbxref=GenBank:WP_101457997.1;Name=WP_101457997.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729788.1;locus_tag=CYJ00_RS03195;product=aminoacyltransferase;protein_id=WP_101457997.1;transl_table=11
NZ_PJUS02000110.1	RefSeq	pseudogene	1561	1708	.	-	.	ID=gene-CYJ00_RS03200;Name=CYJ00_RS03200;end_range=1708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03200;old_locus_tag=CYJ00_003205;partial=true;pseudo=true;start_range=.,1561
NZ_PJUS02000110.1	Protein Homology	CDS	1561	1708	.	-	0	ID=cds-CYJ00_RS03200;Parent=gene-CYJ00_RS03200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1708,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ00_RS03200;partial=true;product=transposase;pseudo=true;start_range=.,1561;transl_table=11
NZ_PJUS02000110.1	RefSeq	gene	1719	2000	.	-	.	ID=gene-CYJ00_RS03205;Name=CYJ00_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03205;old_locus_tag=CYJ00_003210
NZ_PJUS02000110.1	Protein Homology	CDS	1719	2000	.	-	0	ID=cds-WP_015729789.1;Parent=gene-CYJ00_RS03205;Dbxref=GenBank:WP_015729789.1;Name=WP_015729789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612727.1;locus_tag=CYJ00_RS03205;product=hypothetical protein;protein_id=WP_015729789.1;transl_table=11
##sequence-region NZ_PJUS02000349.1 1 2193
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000349.1	RefSeq	region	1	2193	.	+	.	ID=NZ_PJUS02000349.1:1..2193;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000349.1	RefSeq	gene	1	1190	.	+	.	ID=gene-CYJ00_RS10645;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=CYJ00_RS10645;old_locus_tag=CYJ00_010650;partial=true;start_range=.,1
NZ_PJUS02000349.1	Protein Homology	CDS	1	1190	.	+	2	ID=cds-WP_101457998.1;Parent=gene-CYJ00_RS10645;Dbxref=GenBank:WP_101457998.1;Name=WP_101457998.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=CYJ00_RS10645;partial=true;product=two-component system histidine kinase PnpS;protein_id=WP_101457998.1;start_range=.,1;transl_table=11
NZ_PJUS02000349.1	RefSeq	gene	1923	2193	.	+	.	ID=gene-CYJ00_RS10650;Name=CYJ00_RS10650;end_range=2193,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10650;old_locus_tag=CYJ00_010655;partial=true
NZ_PJUS02000349.1	Protein Homology	CDS	1923	2193	.	+	0	ID=cds-WP_423830920.1;Parent=gene-CYJ00_RS10650;Dbxref=GenBank:WP_423830920.1;Name=WP_423830920.1;Ontology_term=GO:0003677,GO:0008409;end_range=2193,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=CYJ00_RS10650;partial=true;product=5'-3' exonuclease;protein_id=WP_423830920.1;transl_table=11
##sequence-region NZ_PJUS02000072.1 1 2257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000072.1	RefSeq	region	1	2257	.	+	.	ID=NZ_PJUS02000072.1:1..2257;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000072.1	RefSeq	gene	45	1013	.	+	.	ID=gene-CYJ00_RS01945;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=CYJ00_RS01945;old_locus_tag=CYJ00_001945
NZ_PJUS02000072.1	Protein Homology	CDS	45	1013	.	+	0	ID=cds-WP_101457999.1;Parent=gene-CYJ00_RS01945;Dbxref=GenBank:WP_101457999.1;Name=WP_101457999.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=CYJ00_RS01945;product=tagatose-bisphosphate aldolase;protein_id=WP_101457999.1;transl_table=11
NZ_PJUS02000072.1	RefSeq	gene	1039	1353	.	+	.	ID=gene-CYJ00_RS01950;Name=CYJ00_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01950;old_locus_tag=CYJ00_001950
NZ_PJUS02000072.1	Protein Homology	CDS	1039	1353	.	+	0	ID=cds-WP_014613256.1;Parent=gene-CYJ00_RS01950;Dbxref=GenBank:WP_014613256.1;Name=WP_014613256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=CYJ00_RS01950;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_014613256.1;transl_table=11
NZ_PJUS02000072.1	RefSeq	gene	1359	2257	.	+	.	ID=gene-CYJ00_RS01955;Name=CYJ00_RS01955;end_range=2257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01955;old_locus_tag=CYJ00_001955;partial=true
NZ_PJUS02000072.1	Protein Homology	CDS	1359	2257	.	+	0	ID=cds-WP_157938997.1;Parent=gene-CYJ00_RS01955;Dbxref=GenBank:WP_157938997.1;Name=WP_157938997.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=2257,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275159.1;locus_tag=CYJ00_RS01955;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_157938997.1;transl_table=11
##sequence-region NZ_PJUS02000104.1 1 28530
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000104.1	RefSeq	region	1	28530	.	+	.	ID=NZ_PJUS02000104.1:1..28530;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000104.1	RefSeq	gene	434	1873	.	+	.	ID=gene-CYJ00_RS02870;Name=CYJ00_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02870;old_locus_tag=CYJ00_002870
NZ_PJUS02000104.1	Protein Homology	CDS	434	1873	.	+	0	ID=cds-WP_101457640.1;Parent=gene-CYJ00_RS02870;Dbxref=GenBank:WP_101457640.1;Name=WP_101457640.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166076.1;locus_tag=CYJ00_RS02870;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_101457640.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	2571	3509	.	-	.	ID=gene-CYJ00_RS02875;Name=CYJ00_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02875;old_locus_tag=CYJ00_002875
NZ_PJUS02000104.1	Protein Homology	CDS	2571	3509	.	-	0	ID=cds-WP_101457641.1;Parent=gene-CYJ00_RS02875;Dbxref=GenBank:WP_101457641.1;Name=WP_101457641.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=CYJ00_RS02875;product=magnesium transporter CorA family protein;protein_id=WP_101457641.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	3506	3970	.	-	.	ID=gene-CYJ00_RS02880;Name=CYJ00_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02880;old_locus_tag=CYJ00_002880
NZ_PJUS02000104.1	Protein Homology	CDS	3506	3970	.	-	0	ID=cds-WP_014613075.1;Parent=gene-CYJ00_RS02880;Dbxref=GenBank:WP_014613075.1;Name=WP_014613075.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=CYJ00_RS02880;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613075.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	4381	6036	.	+	.	ID=gene-CYJ00_RS02885;Name=CYJ00_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02885;old_locus_tag=CYJ00_002885
NZ_PJUS02000104.1	Protein Homology	CDS	4381	6036	.	+	0	ID=cds-WP_096533529.1;Parent=gene-CYJ00_RS02885;Dbxref=GenBank:WP_096533529.1;Name=WP_096533529.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385453.1;locus_tag=CYJ00_RS02885;product=Na/Pi cotransporter family protein;protein_id=WP_096533529.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	6339	6542	.	+	.	ID=gene-CYJ00_RS02890;Name=CYJ00_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02890;old_locus_tag=CYJ00_002890
NZ_PJUS02000104.1	Protein Homology	CDS	6339	6542	.	+	0	ID=cds-WP_020219804.1;Parent=gene-CYJ00_RS02890;Dbxref=GenBank:WP_020219804.1;Name=WP_020219804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219804.1;locus_tag=CYJ00_RS02890;product=hypothetical protein;protein_id=WP_020219804.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	6750	7208	.	+	.	ID=gene-CYJ00_RS02895;Name=CYJ00_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02895;old_locus_tag=CYJ00_002895
NZ_PJUS02000104.1	Protein Homology	CDS	6750	7208	.	+	0	ID=cds-WP_014613078.1;Parent=gene-CYJ00_RS02895;Dbxref=GenBank:WP_014613078.1;Name=WP_014613078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165496.1;locus_tag=CYJ00_RS02895;product=DUF2871 domain-containing protein;protein_id=WP_014613078.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	7285	7701	.	-	.	ID=gene-CYJ00_RS02900;Name=CYJ00_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02900;old_locus_tag=CYJ00_002900
NZ_PJUS02000104.1	Protein Homology	CDS	7285	7701	.	-	0	ID=cds-WP_014613080.1;Parent=gene-CYJ00_RS02900;Dbxref=GenBank:WP_014613080.1;Name=WP_014613080.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729591.1;locus_tag=CYJ00_RS02900;product=GNAT family N-acetyltransferase;protein_id=WP_014613080.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	7722	8750	.	-	.	ID=gene-CYJ00_RS02905;Name=CYJ00_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02905;old_locus_tag=CYJ00_002905
NZ_PJUS02000104.1	Protein Homology	CDS	7722	8750	.	-	0	ID=cds-WP_014613081.1;Parent=gene-CYJ00_RS02905;Dbxref=GenBank:WP_014613081.1;Name=WP_014613081.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165498.1;locus_tag=CYJ00_RS02905;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014613081.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	8937	10280	.	-	.	ID=gene-CYJ00_RS02910;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=CYJ00_RS02910;old_locus_tag=CYJ00_002910
NZ_PJUS02000104.1	Protein Homology	CDS	8937	10280	.	-	0	ID=cds-WP_014613082.1;Parent=gene-CYJ00_RS02910;Dbxref=GenBank:WP_014613082.1;Name=WP_014613082.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=CYJ00_RS02910;product=glucose transporter GlcP;protein_id=WP_014613082.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	10517	11512	.	-	.	ID=gene-CYJ00_RS02915;Name=CYJ00_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02915;old_locus_tag=CYJ00_002915
NZ_PJUS02000104.1	Protein Homology	CDS	10517	11512	.	-	0	ID=cds-WP_015729589.1;Parent=gene-CYJ00_RS02915;Dbxref=GenBank:WP_015729589.1;Name=WP_015729589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=CYJ00_RS02915;product=oxidoreductase;protein_id=WP_015729589.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	11644	12162	.	+	.	ID=gene-CYJ00_RS02920;Name=CYJ00_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02920;old_locus_tag=CYJ00_002920
NZ_PJUS02000104.1	Protein Homology	CDS	11644	12162	.	+	0	ID=cds-WP_065520368.1;Parent=gene-CYJ00_RS02920;Dbxref=GenBank:WP_065520368.1;Name=WP_065520368.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729588.1;locus_tag=CYJ00_RS02920;product=GNAT family N-acetyltransferase;protein_id=WP_065520368.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	12267	12971	.	+	.	ID=gene-CYJ00_RS02925;Name=CYJ00_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02925;old_locus_tag=CYJ00_002925
NZ_PJUS02000104.1	Protein Homology	CDS	12267	12971	.	+	0	ID=cds-WP_014613085.1;Parent=gene-CYJ00_RS02925;Dbxref=GenBank:WP_014613085.1;Name=WP_014613085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=CYJ00_RS02925;product=hypothetical protein;protein_id=WP_014613085.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	13425	15029	.	+	.	ID=gene-CYJ00_RS02930;Name=CYJ00_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02930;old_locus_tag=CYJ00_002930
NZ_PJUS02000104.1	Protein Homology	CDS	13425	15029	.	+	0	ID=cds-WP_063278990.1;Parent=gene-CYJ00_RS02930;Dbxref=GenBank:WP_063278990.1;Name=WP_063278990.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165503.1;locus_tag=CYJ00_RS02930;product=L-lactate permease;protein_id=WP_063278990.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	15497	16672	.	-	.	ID=gene-CYJ00_RS02935;Name=CYJ00_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02935;old_locus_tag=CYJ00_002935
NZ_PJUS02000104.1	Protein Homology	CDS	15497	16672	.	-	0	ID=cds-WP_065520369.1;Parent=gene-CYJ00_RS02935;Dbxref=GenBank:WP_065520369.1;Name=WP_065520369.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=CYJ00_RS02935;product=glycosyltransferase family 4 protein;protein_id=WP_065520369.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	17099	18604	.	+	.	ID=gene-CYJ00_RS02940;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CYJ00_RS02940;old_locus_tag=CYJ00_002940
NZ_PJUS02000104.1	Protein Homology	CDS	17099	18604	.	+	0	ID=cds-WP_014613089.1;Parent=gene-CYJ00_RS02940;Dbxref=GenBank:WP_014613089.1;Name=WP_014613089.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=CYJ00_RS02940;product=malate dehydrogenase (quinone);protein_id=WP_014613089.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	18956	20347	.	-	.	ID=gene-CYJ00_RS02945;Name=CYJ00_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02945;old_locus_tag=CYJ00_002945
NZ_PJUS02000104.1	Protein Homology	CDS	18956	20347	.	-	0	ID=cds-WP_101457642.1;Parent=gene-CYJ00_RS02945;Dbxref=GenBank:WP_101457642.1;Name=WP_101457642.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219799.1;locus_tag=CYJ00_RS02945;product=sensor histidine kinase;protein_id=WP_101457642.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	20340	21017	.	-	.	ID=gene-CYJ00_RS02950;Name=CYJ00_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02950;old_locus_tag=CYJ00_002950
NZ_PJUS02000104.1	Protein Homology	CDS	20340	21017	.	-	0	ID=cds-WP_020219798.1;Parent=gene-CYJ00_RS02950;Dbxref=GenBank:WP_020219798.1;Name=WP_020219798.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=CYJ00_RS02950;product=response regulator transcription factor;protein_id=WP_020219798.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	21863	22927	.	+	.	ID=gene-CYJ00_RS02955;Name=CYJ00_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02955;old_locus_tag=CYJ00_002955
NZ_PJUS02000104.1	Protein Homology	CDS	21863	22927	.	+	0	ID=cds-WP_020219797.1;Parent=gene-CYJ00_RS02955;Dbxref=GenBank:WP_020219797.1;Name=WP_020219797.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613092.1;locus_tag=CYJ00_RS02955;product=ABC transporter permease;protein_id=WP_020219797.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	22924	23613	.	+	.	ID=gene-CYJ00_RS02960;Name=CYJ00_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02960;old_locus_tag=CYJ00_002960
NZ_PJUS02000104.1	Protein Homology	CDS	22924	23613	.	+	0	ID=cds-WP_014613093.1;Parent=gene-CYJ00_RS02960;Dbxref=GenBank:WP_014613093.1;Name=WP_014613093.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165509.1;locus_tag=CYJ00_RS02960;product=ABC transporter ATP-binding protein;protein_id=WP_014613093.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	23656	23919	.	-	.	ID=gene-CYJ00_RS12970;Name=CYJ00_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12970
NZ_PJUS02000104.1	Protein Homology	CDS	23656	23919	.	-	0	ID=cds-WP_110144909.1;Parent=gene-CYJ00_RS12970;Dbxref=GenBank:WP_110144909.1;Name=WP_110144909.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: protein motif:HMM:NF015746.7;locus_tag=CYJ00_RS12970;product=AbgT family transporter;protein_id=WP_110144909.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	24050	24886	.	-	.	ID=gene-CYJ00_RS02970;Name=CYJ00_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02970;old_locus_tag=CYJ00_002970
NZ_PJUS02000104.1	Protein Homology	CDS	24050	24886	.	-	0	ID=cds-WP_099991874.1;Parent=gene-CYJ00_RS02970;Dbxref=GenBank:WP_099991874.1;Name=WP_099991874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613095.1;locus_tag=CYJ00_RS02970;product=YdcF family protein;protein_id=WP_099991874.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	25144	25608	.	+	.	ID=gene-CYJ00_RS02975;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=CYJ00_RS02975;old_locus_tag=CYJ00_002975
NZ_PJUS02000104.1	Protein Homology	CDS	25144	25608	.	+	0	ID=cds-WP_014613096.1;Parent=gene-CYJ00_RS02975;Dbxref=GenBank:WP_014613096.1;Name=WP_014613096.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169579.1;locus_tag=CYJ00_RS02975;product=MarR family transcriptional regulator TcaR;protein_id=WP_014613096.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	25715	27109	.	+	.	ID=gene-CYJ00_RS02980;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02980;old_locus_tag=CYJ00_002980
NZ_PJUS02000104.1	Protein Homology	CDS	25715	27109	.	+	0	ID=cds-WP_065520370.1;Parent=gene-CYJ00_RS02980;Dbxref=GenBank:WP_065520370.1;Name=WP_065520370.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=CYJ00_RS02980;product=membrane-associated protein TcaA;protein_id=WP_065520370.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	27588	28130	.	+	.	ID=gene-CYJ00_RS02985;Name=CYJ00_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02985;old_locus_tag=CYJ00_002985
NZ_PJUS02000104.1	Protein Homology	CDS	27588	28130	.	+	0	ID=cds-WP_037544134.1;Parent=gene-CYJ00_RS02985;Dbxref=GenBank:WP_037544134.1;Name=WP_037544134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613098.1;locus_tag=CYJ00_RS02985;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037544134.1;transl_table=11
NZ_PJUS02000104.1	RefSeq	gene	28224	28530	.	+	.	ID=gene-CYJ00_RS02990;Name=CYJ00_RS02990;end_range=28530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02990;old_locus_tag=CYJ00_002990;partial=true
NZ_PJUS02000104.1	Protein Homology	CDS	28224	28530	.	+	0	ID=cds-WP_490327963.1;Parent=gene-CYJ00_RS02990;Dbxref=GenBank:WP_490327963.1;Name=WP_490327963.1;end_range=28530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426234.1;locus_tag=CYJ00_RS02990;partial=true;product=thiaminase II/PqqC family protein;protein_id=WP_490327963.1;transl_table=11
##sequence-region NZ_PJUS02000074.1 1 12775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000074.1	RefSeq	region	1	12775	.	+	.	ID=NZ_PJUS02000074.1:1..12775;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000074.1	RefSeq	gene	84	947	.	+	.	ID=gene-CYJ00_RS01965;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CYJ00_RS01965;old_locus_tag=CYJ00_001965
NZ_PJUS02000074.1	Protein Homology	CDS	84	947	.	+	0	ID=cds-WP_014612869.1;Parent=gene-CYJ00_RS01965;Dbxref=GenBank:WP_014612869.1;Name=WP_014612869.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729709.1;locus_tag=CYJ00_RS01965;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_014612869.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	1167	2444	.	+	.	ID=gene-CYJ00_RS01970;Name=CYJ00_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01970;old_locus_tag=CYJ00_001970
NZ_PJUS02000074.1	Protein Homology	CDS	1167	2444	.	+	0	ID=cds-WP_423830911.1;Parent=gene-CYJ00_RS01970;Dbxref=GenBank:WP_423830911.1;Name=WP_423830911.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006927.0;locus_tag=CYJ00_RS01970;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_423830911.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	2600	3790	.	-	.	ID=gene-CYJ00_RS01975;Name=CYJ00_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01975;old_locus_tag=CYJ00_001975
NZ_PJUS02000074.1	Protein Homology	CDS	2600	3790	.	-	0	ID=cds-WP_014612871.1;Parent=gene-CYJ00_RS01975;Dbxref=GenBank:WP_014612871.1;Name=WP_014612871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167057.1;locus_tag=CYJ00_RS01975;product=YbfB/YjiJ family MFS transporter;protein_id=WP_014612871.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	4309	5688	.	+	.	ID=gene-CYJ00_RS01980;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01980;old_locus_tag=CYJ00_001980
NZ_PJUS02000074.1	Protein Homology	CDS	4309	5688	.	+	0	ID=cds-WP_063284754.1;Parent=gene-CYJ00_RS01980;Dbxref=GenBank:WP_063284754.1;Name=WP_063284754.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612872.1;locus_tag=CYJ00_RS01980;product=melibiose:sodium transporter MelB;protein_id=WP_063284754.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	5717	8713	.	+	.	ID=gene-CYJ00_RS01985;Name=CYJ00_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01985;old_locus_tag=CYJ00_001985
NZ_PJUS02000074.1	Protein Homology	CDS	5717	8713	.	+	0	ID=cds-WP_063284755.1;Parent=gene-CYJ00_RS01985;Dbxref=GenBank:WP_063284755.1;Name=WP_063284755.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612873.1;locus_tag=CYJ00_RS01985;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=WP_063284755.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	8827	9774	.	-	.	ID=gene-CYJ00_RS01990;Name=CYJ00_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01990;old_locus_tag=CYJ00_001990
NZ_PJUS02000074.1	Protein Homology	CDS	8827	9774	.	-	0	ID=cds-WP_014612874.1;Parent=gene-CYJ00_RS01990;Dbxref=GenBank:WP_014612874.1;Name=WP_014612874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612874.1;locus_tag=CYJ00_RS01990;product=nucleoside hydrolase;protein_id=WP_014612874.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	9970	10812	.	-	.	ID=gene-CYJ00_RS01995;Name=CYJ00_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01995;old_locus_tag=CYJ00_001995
NZ_PJUS02000074.1	Protein Homology	CDS	9970	10812	.	-	0	ID=cds-WP_014612875.1;Parent=gene-CYJ00_RS01995;Dbxref=GenBank:WP_014612875.1;Name=WP_014612875.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612875.1;locus_tag=CYJ00_RS01995;product=alpha/beta hydrolase;protein_id=WP_014612875.1;transl_table=11
NZ_PJUS02000074.1	RefSeq	gene	10958	12448	.	+	.	ID=gene-CYJ00_RS02000;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ00_RS02000;old_locus_tag=CYJ00_002000
NZ_PJUS02000074.1	Protein Homology	CDS	10958	12448	.	+	0	ID=cds-WP_096536238.1;Parent=gene-CYJ00_RS02000;Dbxref=GenBank:WP_096536238.1;Name=WP_096536238.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=CYJ00_RS02000;product=cardiolipin synthase;protein_id=WP_096536238.1;transl_table=11
##sequence-region NZ_PJUS02000183.1 1 2106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000183.1	RefSeq	region	1	2106	.	+	.	ID=NZ_PJUS02000183.1:1..2106;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000183.1	cmsearch	riboswitch	74	185	.	-	.	ID=id-NZ_PJUS02000183.1:74..185;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000183.1	RefSeq	gene	433	2013	.	+	.	ID=gene-CYJ00_RS05025;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05025;old_locus_tag=CYJ00_005030
NZ_PJUS02000183.1	Protein Homology	CDS	433	2013	.	+	0	ID=cds-WP_014613583.1;Parent=gene-CYJ00_RS05025;Dbxref=GenBank:WP_014613583.1;Name=WP_014613583.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=CYJ00_RS05025;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014613583.1;transl_table=11
##sequence-region NZ_PJUS02000316.1 1 2125
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000316.1	RefSeq	region	1	2125	.	+	.	ID=NZ_PJUS02000316.1:1..2125;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000316.1	RefSeq	gene	152	949	.	-	.	ID=gene-CYJ00_RS08465;Name=CYJ00_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08465;old_locus_tag=CYJ00_008470
NZ_PJUS02000316.1	Protein Homology	CDS	152	949	.	-	0	ID=cds-WP_014613499.1;Parent=gene-CYJ00_RS08465;Dbxref=GenBank:WP_014613499.1;Name=WP_014613499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=CYJ00_RS08465;product=membrane protein;protein_id=WP_014613499.1;transl_table=11
NZ_PJUS02000316.1	RefSeq	gene	959	2125	.	-	.	ID=gene-CYJ00_RS08470;Name=CYJ00_RS08470;end_range=2125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08470;old_locus_tag=CYJ00_008475;partial=true
NZ_PJUS02000316.1	Protein Homology	CDS	959	2125	.	-	0	ID=cds-WP_101458000.1;Parent=gene-CYJ00_RS08470;Dbxref=GenBank:WP_101458000.1;Name=WP_101458000.1;end_range=2125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613498.1;locus_tag=CYJ00_RS08470;partial=true;product=P-loop NTPase family protein;protein_id=WP_101458000.1;transl_table=11
##sequence-region NZ_PJUS02000378.1 1 2269
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000378.1	RefSeq	region	1	2269	.	+	.	ID=NZ_PJUS02000378.1:1..2269;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000378.1	RefSeq	gene	39	167	.	+	.	ID=gene-CYJ00_RS11270;Name=CYJ00_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11270;old_locus_tag=CYJ00_011275
NZ_PJUS02000378.1	Protein Homology	CDS	39	167	.	+	0	ID=cds-WP_014614335.1;Parent=gene-CYJ00_RS11270;Dbxref=GenBank:WP_014614335.1;Name=WP_014614335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=CYJ00_RS11270;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_014614335.1;transl_table=11
NZ_PJUS02000378.1	RefSeq	gene	187	1641	.	+	.	ID=gene-CYJ00_RS11275;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CYJ00_RS11275;old_locus_tag=CYJ00_011280
NZ_PJUS02000378.1	Protein Homology	CDS	187	1641	.	+	0	ID=cds-WP_015728921.1;Parent=gene-CYJ00_RS11275;Dbxref=GenBank:WP_015728921.1;Name=WP_015728921.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614336.1;locus_tag=CYJ00_RS11275;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_015728921.1;transl_table=11
NZ_PJUS02000378.1	RefSeq	gene	1638	2269	.	+	.	ID=gene-CYJ00_RS11280;Name=CYJ00_RS11280;end_range=2269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11280;old_locus_tag=CYJ00_011285;partial=true
NZ_PJUS02000378.1	Protein Homology	CDS	1638	2269	.	+	0	ID=cds-WP_490327969.1;Parent=gene-CYJ00_RS11280;Dbxref=GenBank:WP_490327969.1;Name=WP_490327969.1;Ontology_term=GO:0008374;end_range=2269,.;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728920.1;locus_tag=CYJ00_RS11280;partial=true;product=MBOAT family O-acyltransferase;protein_id=WP_490327969.1;transl_table=11
##sequence-region NZ_PJUS02000092.1 1 2054
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000092.1	RefSeq	region	1	2054	.	+	.	ID=NZ_PJUS02000092.1:1..2054;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000092.1	RefSeq	gene	36	479	.	+	.	ID=gene-CYJ00_RS02435;Name=CYJ00_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02435;old_locus_tag=CYJ00_002435
NZ_PJUS02000092.1	Protein Homology	CDS	36	479	.	+	0	ID=cds-WP_014614193.1;Parent=gene-CYJ00_RS02435;Dbxref=GenBank:WP_014614193.1;Name=WP_014614193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614193.1;locus_tag=CYJ00_RS02435;product=VOC family protein;protein_id=WP_014614193.1;transl_table=11
NZ_PJUS02000092.1	RefSeq	gene	603	1907	.	-	.	ID=gene-CYJ00_RS02440;Name=CYJ00_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02440;old_locus_tag=CYJ00_002440
NZ_PJUS02000092.1	Protein Homology	CDS	603	1907	.	-	0	ID=cds-WP_063278836.1;Parent=gene-CYJ00_RS02440;Dbxref=GenBank:WP_063278836.1;Name=WP_063278836.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=CYJ00_RS02440;product=TrkH family potassium uptake protein;protein_id=WP_063278836.1;transl_table=11
##sequence-region NZ_PJUS02000186.1 1 11854
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000186.1	RefSeq	region	1	11854	.	+	.	ID=NZ_PJUS02000186.1:1..11854;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000186.1	RefSeq	gene	1	2495	.	-	.	ID=gene-CYJ00_RS05055;Name=CYJ00_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05055;old_locus_tag=CYJ00_005060;partial=true;start_range=.,1
NZ_PJUS02000186.1	Protein Homology	CDS	1	2495	.	-	0	ID=cds-WP_101457705.1;Parent=gene-CYJ00_RS05055;Dbxref=GenBank:WP_101457705.1;Name=WP_101457705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167306.1;locus_tag=CYJ00_RS05055;partial=true;product=YhgE/Pip domain-containing protein;protein_id=WP_101457705.1;start_range=.,1;transl_table=11
NZ_PJUS02000186.1	RefSeq	gene	2824	4899	.	+	.	ID=gene-CYJ00_RS05060;Name=CYJ00_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05060;old_locus_tag=CYJ00_005065
NZ_PJUS02000186.1	Protein Homology	CDS	2824	4899	.	+	0	ID=cds-WP_101457706.1;Parent=gene-CYJ00_RS05060;Dbxref=GenBank:WP_101457706.1;Name=WP_101457706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729665.1;locus_tag=CYJ00_RS05060;product=amidase domain-containing protein;protein_id=WP_101457706.1;transl_table=11
NZ_PJUS02000186.1	RefSeq	gene	5478	7337	.	-	.	ID=gene-CYJ00_RS05065;Name=spsA;gbkey=Gene;gene=spsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS05065;old_locus_tag=CYJ00_005070
NZ_PJUS02000186.1	Protein Homology	CDS	5478	7337	.	-	0	ID=cds-WP_037542220.1;Parent=gene-CYJ00_RS05065;Dbxref=GenBank:WP_037542220.1;Name=WP_037542220.1;gbkey=CDS;gene=spsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612921.1;locus_tag=CYJ00_RS05065;product=LPXTG-anchored surface protein SpsA;protein_id=WP_037542220.1;transl_table=11
NZ_PJUS02000186.1	RefSeq	pseudogene	7474	9396	.	-	.	ID=gene-CYJ00_RS05070;Name=CYJ00_RS05070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05070;old_locus_tag=CYJ00_005075;pseudo=true
NZ_PJUS02000186.1	Protein Homology	CDS	7474	9396	.	-	0	ID=cds-CYJ00_RS05070;Parent=gene-CYJ00_RS05070;Note=internal stop;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166501.1;locus_tag=CYJ00_RS05070;product=fructose-specific PTS transporter subunit EIIC;pseudo=true;transl_table=11
NZ_PJUS02000186.1	RefSeq	gene	9583	10305	.	-	.	ID=gene-CYJ00_RS05075;Name=CYJ00_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05075;old_locus_tag=CYJ00_005080
NZ_PJUS02000186.1	Protein Homology	CDS	9583	10305	.	-	0	ID=cds-WP_063284769.1;Parent=gene-CYJ00_RS05075;Dbxref=GenBank:WP_063284769.1;Name=WP_063284769.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729668.1;locus_tag=CYJ00_RS05075;product=helix-turn-helix domain-containing protein;protein_id=WP_063284769.1;transl_table=11
NZ_PJUS02000186.1	RefSeq	gene	10335	11300	.	-	.	ID=gene-CYJ00_RS05080;Name=CYJ00_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05080;old_locus_tag=CYJ00_005085
NZ_PJUS02000186.1	Protein Homology	CDS	10335	11300	.	-	0	ID=cds-WP_096536262.1;Parent=gene-CYJ00_RS05080;Dbxref=GenBank:WP_096536262.1;Name=WP_096536262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=CYJ00_RS05080;product=alpha/beta fold hydrolase;protein_id=WP_096536262.1;transl_table=11
NZ_PJUS02000186.1	RefSeq	gene	11446	11775	.	-	.	ID=gene-CYJ00_RS05085;Name=CYJ00_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05085;old_locus_tag=CYJ00_005090
NZ_PJUS02000186.1	Protein Homology	CDS	11446	11775	.	-	0	ID=cds-WP_019167490.1;Parent=gene-CYJ00_RS05085;Dbxref=GenBank:WP_019167490.1;Name=WP_019167490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612916.1;locus_tag=CYJ00_RS05085;product=antibiotic biosynthesis monooxygenase;protein_id=WP_019167490.1;transl_table=11
##sequence-region NZ_PJUS02000405.1 1 3430
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000405.1	RefSeq	region	1	3430	.	+	.	ID=NZ_PJUS02000405.1:1..3430;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000405.1	RefSeq	gene	1	572	.	+	.	ID=gene-CYJ00_RS11890;Name=CYJ00_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11890;old_locus_tag=CYJ00_011895;partial=true;start_range=.,1
NZ_PJUS02000405.1	Protein Homology	CDS	1	572	.	+	2	ID=cds-WP_133158358.1;Parent=gene-CYJ00_RS11890;Dbxref=GenBank:WP_133158358.1;Name=WP_133158358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204270.1;locus_tag=CYJ00_RS11890;partial=true;product=ATP-binding protein;protein_id=WP_133158358.1;start_range=.,1;transl_table=11
NZ_PJUS02000405.1	RefSeq	gene	1158	1247	.	+	.	ID=gene-CYJ00_RS14050;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ00_RS14050
NZ_PJUS02000405.1	Protein Homology	CDS	1158	1247	.	+	0	ID=cds-WP_110148278.1;Parent=gene-CYJ00_RS14050;Dbxref=GenBank:WP_110148278.1;Name=WP_110148278.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012598.7;locus_tag=CYJ00_RS14050;product=30S ribosomal protein S9;protein_id=WP_110148278.1;transl_table=11
NZ_PJUS02000405.1	RefSeq	gene	1536	2081	.	-	.	ID=gene-CYJ00_RS11900;Name=CYJ00_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11900;old_locus_tag=CYJ00_011905
NZ_PJUS02000405.1	Protein Homology	CDS	1536	2081	.	-	0	ID=cds-WP_101458001.1;Parent=gene-CYJ00_RS11900;Dbxref=GenBank:WP_101458001.1;Name=WP_101458001.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219632.1;locus_tag=CYJ00_RS11900;product=cysteine hydrolase family protein;protein_id=WP_101458001.1;transl_table=11
NZ_PJUS02000405.1	RefSeq	gene	2242	2691	.	+	.	ID=gene-CYJ00_RS11905;Name=CYJ00_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11905;old_locus_tag=CYJ00_011910
NZ_PJUS02000405.1	Protein Homology	CDS	2242	2691	.	+	0	ID=cds-WP_014613249.1;Parent=gene-CYJ00_RS11905;Dbxref=GenBank:WP_014613249.1;Name=WP_014613249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054200.1;locus_tag=CYJ00_RS11905;product=sce7726 family protein;protein_id=WP_014613249.1;transl_table=11
NZ_PJUS02000405.1	RefSeq	gene	2879	2965	.	+	.	ID=gene-CYJ00_RS14055;Name=CYJ00_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14055
NZ_PJUS02000405.1	Protein Homology	CDS	2879	2965	.	+	0	ID=cds-WP_226957617.1;Parent=gene-CYJ00_RS14055;Dbxref=GenBank:WP_226957617.1;Name=WP_226957617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.7;locus_tag=CYJ00_RS14055;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_226957617.1;transl_table=11
##sequence-region NZ_PJUS02000127.1 1 2715
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000127.1	RefSeq	region	1	2715	.	+	.	ID=NZ_PJUS02000127.1:1..2715;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000127.1	RefSeq	gene	1	145	.	-	.	ID=gene-CYJ00_RS03560;Name=CYJ00_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03560;old_locus_tag=CYJ00_003565;partial=true;start_range=.,1
NZ_PJUS02000127.1	Protein Homology	CDS	1	145	.	-	0	ID=cds-WP_198597673.1;Parent=gene-CYJ00_RS03560;Dbxref=GenBank:WP_198597673.1;Name=WP_198597673.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613834.1;locus_tag=CYJ00_RS03560;partial=true;product=aminopeptidase P family N-terminal domain-containing protein;protein_id=WP_198597673.1;start_range=.,1;transl_table=11
NZ_PJUS02000127.1	RefSeq	gene	240	839	.	+	.	ID=gene-CYJ00_RS03565;Name=CYJ00_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03565;old_locus_tag=CYJ00_003570
NZ_PJUS02000127.1	Protein Homology	CDS	240	839	.	+	0	ID=cds-WP_099997515.1;Parent=gene-CYJ00_RS03565;Dbxref=GenBank:WP_099997515.1;Name=WP_099997515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613833.1;locus_tag=CYJ00_RS03565;product=coiled-coil domain-containing 22 family protein;protein_id=WP_099997515.1;transl_table=11
NZ_PJUS02000127.1	RefSeq	gene	860	1084	.	+	.	ID=gene-CYJ00_RS03570;Name=CYJ00_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03570;old_locus_tag=CYJ00_003575
NZ_PJUS02000127.1	Protein Homology	CDS	860	1084	.	+	0	ID=cds-WP_014613832.1;Parent=gene-CYJ00_RS03570;Dbxref=GenBank:WP_014613832.1;Name=WP_014613832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613832.1;locus_tag=CYJ00_RS03570;product=SA1362 family protein;protein_id=WP_014613832.1;transl_table=11
NZ_PJUS02000127.1	RefSeq	gene	1200	2030	.	-	.	ID=gene-CYJ00_RS03575;Name=CYJ00_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03575;old_locus_tag=CYJ00_003580
NZ_PJUS02000127.1	Protein Homology	CDS	1200	2030	.	-	0	ID=cds-WP_014613831.1;Parent=gene-CYJ00_RS03575;Dbxref=GenBank:WP_014613831.1;Name=WP_014613831.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=CYJ00_RS03575;product=lipoate--protein ligase family protein;protein_id=WP_014613831.1;transl_table=11
NZ_PJUS02000127.1	RefSeq	gene	2190	2567	.	+	.	ID=gene-CYJ00_RS03580;Name=CYJ00_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03580;old_locus_tag=CYJ00_003585
NZ_PJUS02000127.1	Protein Homology	CDS	2190	2567	.	+	0	ID=cds-WP_370498505.1;Parent=gene-CYJ00_RS03580;Dbxref=GenBank:WP_370498505.1;Name=WP_370498505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449897.1;locus_tag=CYJ00_RS03580;product=rhodanese-like domain-containing protein;protein_id=WP_370498505.1;transl_table=11
##sequence-region NZ_PJUS02000361.1 1 15590
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000361.1	RefSeq	region	1	15590	.	+	.	ID=NZ_PJUS02000361.1:1..15590;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000361.1	RefSeq	gene	77	412	.	+	.	ID=gene-CYJ00_RS10860;Name=CYJ00_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10860;old_locus_tag=CYJ00_010865
NZ_PJUS02000361.1	Protein Homology	CDS	77	412	.	+	0	ID=cds-WP_037543809.1;Parent=gene-CYJ00_RS10860;Dbxref=GenBank:WP_037543809.1;Name=WP_037543809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614582.1;locus_tag=CYJ00_RS10860;product=SA0632 family lipoprotein;protein_id=WP_037543809.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	535	834	.	+	.	ID=gene-CYJ00_RS10865;Name=CYJ00_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10865;old_locus_tag=CYJ00_010870
NZ_PJUS02000361.1	Protein Homology	CDS	535	834	.	+	0	ID=cds-WP_020219811.1;Parent=gene-CYJ00_RS10865;Dbxref=GenBank:WP_020219811.1;Name=WP_020219811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=CYJ00_RS10865;product=hypothetical protein;protein_id=WP_020219811.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	1044	1592	.	+	.	ID=gene-CYJ00_RS10870;Name=CYJ00_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10870;old_locus_tag=CYJ00_010875
NZ_PJUS02000361.1	Protein Homology	CDS	1044	1592	.	+	0	ID=cds-WP_014614580.1;Parent=gene-CYJ00_RS10870;Dbxref=GenBank:WP_014614580.1;Name=WP_014614580.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614580.1;locus_tag=CYJ00_RS10870;product=GNAT family N-acetyltransferase;protein_id=WP_014614580.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	2403	2969	.	-	.	ID=gene-CYJ00_RS10875;Name=CYJ00_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10875;old_locus_tag=CYJ00_010880
NZ_PJUS02000361.1	Protein Homology	CDS	2403	2969	.	-	0	ID=cds-WP_031253776.1;Parent=gene-CYJ00_RS10875;Dbxref=GenBank:WP_031253776.1;Name=WP_031253776.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=CYJ00_RS10875;product=LOG family protein;protein_id=WP_031253776.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	3070	3516	.	-	.	ID=gene-CYJ00_RS10880;Name=CYJ00_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10880;old_locus_tag=CYJ00_010885
NZ_PJUS02000361.1	Protein Homology	CDS	3070	3516	.	-	0	ID=cds-WP_014614578.1;Parent=gene-CYJ00_RS10880;Dbxref=GenBank:WP_014614578.1;Name=WP_014614578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166183.1;locus_tag=CYJ00_RS10880;product=YaiI/YqxD family protein;protein_id=WP_014614578.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	3517	4506	.	-	.	ID=gene-CYJ00_RS10885;Name=CYJ00_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10885;old_locus_tag=CYJ00_010890
NZ_PJUS02000361.1	Protein Homology	CDS	3517	4506	.	-	0	ID=cds-WP_096535854.1;Parent=gene-CYJ00_RS10885;Dbxref=GenBank:WP_096535854.1;Name=WP_096535854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614577.1;locus_tag=CYJ00_RS10885;product=hypothetical protein;protein_id=WP_096535854.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	4890	5744	.	-	.	ID=gene-CYJ00_RS10890;Name=CYJ00_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10890;old_locus_tag=CYJ00_010895
NZ_PJUS02000361.1	Protein Homology	CDS	4890	5744	.	-	0	ID=cds-WP_015728718.1;Parent=gene-CYJ00_RS10890;Dbxref=GenBank:WP_015728718.1;Name=WP_015728718.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=CYJ00_RS10890;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_015728718.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	6023	7660	.	+	.	ID=gene-CYJ00_RS10895;Name=CYJ00_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10895;old_locus_tag=CYJ00_010900
NZ_PJUS02000361.1	Protein Homology	CDS	6023	7660	.	+	0	ID=cds-WP_101457707.1;Parent=gene-CYJ00_RS10895;Dbxref=GenBank:WP_101457707.1;Name=WP_101457707.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614575.1;locus_tag=CYJ00_RS10895;product=ABC transporter ATP-binding protein/permease;protein_id=WP_101457707.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	7661	9322	.	+	.	ID=gene-CYJ00_RS10900;Name=CYJ00_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10900;old_locus_tag=CYJ00_010905
NZ_PJUS02000361.1	Protein Homology	CDS	7661	9322	.	+	0	ID=cds-WP_101457708.1;Parent=gene-CYJ00_RS10900;Dbxref=GenBank:WP_101457708.1;Name=WP_101457708.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=CYJ00_RS10900;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_101457708.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	9708	10145	.	-	.	ID=gene-CYJ00_RS10910;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10910;old_locus_tag=CYJ00_010915
NZ_PJUS02000361.1	Protein Homology	CDS	9708	10145	.	-	0	ID=cds-WP_014614573.1;Parent=gene-CYJ00_RS10910;Dbxref=GenBank:WP_014614573.1;Name=WP_014614573.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=CYJ00_RS10910;product=global transcriptional regulator MgrA;protein_id=WP_014614573.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	10377	11306	.	+	.	ID=gene-CYJ00_RS10915;Name=CYJ00_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10915;old_locus_tag=CYJ00_010920
NZ_PJUS02000361.1	Protein Homology	CDS	10377	11306	.	+	0	ID=cds-WP_101457709.1;Parent=gene-CYJ00_RS10915;Dbxref=GenBank:WP_101457709.1;Name=WP_101457709.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614572.1;locus_tag=CYJ00_RS10915;product=CobW family GTP-binding protein;protein_id=WP_101457709.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	11333	12241	.	+	.	ID=gene-CYJ00_RS10920;Name=CYJ00_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10920;old_locus_tag=CYJ00_010925
NZ_PJUS02000361.1	Protein Homology	CDS	11333	12241	.	+	0	ID=cds-WP_015728721.1;Parent=gene-CYJ00_RS10920;Dbxref=GenBank:WP_015728721.1;Name=WP_015728721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614571.1;locus_tag=CYJ00_RS10920;product=aldo/keto reductase;protein_id=WP_015728721.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	12324	12605	.	+	.	ID=gene-CYJ00_RS10925;Name=CYJ00_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10925;old_locus_tag=CYJ00_010930
NZ_PJUS02000361.1	Protein Homology	CDS	12324	12605	.	+	0	ID=cds-WP_014614570.1;Parent=gene-CYJ00_RS10925;Dbxref=GenBank:WP_014614570.1;Name=WP_014614570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=CYJ00_RS10925;product=hypothetical protein;protein_id=WP_014614570.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	12793	13074	.	+	.	ID=gene-CYJ00_RS13170;Name=CYJ00_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13170
NZ_PJUS02000361.1	GeneMarkS-2+	CDS	12793	13074	.	+	0	ID=cds-WP_157939018.1;Parent=gene-CYJ00_RS13170;Dbxref=GenBank:WP_157939018.1;Name=WP_157939018.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13170;product=AAA family ATPase;protein_id=WP_157939018.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	13416	14120	.	+	.	ID=gene-CYJ00_RS10930;Name=CYJ00_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10930;old_locus_tag=CYJ00_010935
NZ_PJUS02000361.1	Protein Homology	CDS	13416	14120	.	+	0	ID=cds-WP_407057947.1;Parent=gene-CYJ00_RS10930;Dbxref=GenBank:WP_407057947.1;Name=WP_407057947.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.7;locus_tag=CYJ00_RS10930;product=AAA family ATPase;protein_id=WP_407057947.1;transl_table=11
NZ_PJUS02000361.1	RefSeq	gene	14508	15446	.	+	.	ID=gene-CYJ00_RS10935;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CYJ00_RS10935;old_locus_tag=CYJ00_010940
NZ_PJUS02000361.1	Protein Homology	CDS	14508	15446	.	+	0	ID=cds-WP_014614567.1;Parent=gene-CYJ00_RS10935;Dbxref=GenBank:WP_014614567.1;Name=WP_014614567.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=CYJ00_RS10935;product=malate dehydrogenase;protein_id=WP_014614567.1;transl_table=11
##sequence-region NZ_PJUS02000085.1 1 2218
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000085.1	RefSeq	region	1	2218	.	+	.	ID=NZ_PJUS02000085.1:1..2218;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000085.1	RefSeq	gene	138	1490	.	+	.	ID=gene-CYJ00_RS02340;Name=CYJ00_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02340;old_locus_tag=CYJ00_002340
NZ_PJUS02000085.1	Protein Homology	CDS	138	1490	.	+	0	ID=cds-WP_014614001.1;Parent=gene-CYJ00_RS02340;Dbxref=GenBank:WP_014614001.1;Name=WP_014614001.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729078.1;locus_tag=CYJ00_RS02340;product=aspartate kinase;protein_id=WP_014614001.1;transl_table=11
NZ_PJUS02000085.1	RefSeq	gene	1534	2121	.	-	.	ID=gene-CYJ00_RS02345;Name=CYJ00_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02345;old_locus_tag=CYJ00_002345
NZ_PJUS02000085.1	Protein Homology	CDS	1534	2121	.	-	0	ID=cds-WP_015729077.1;Parent=gene-CYJ00_RS02345;Dbxref=GenBank:WP_015729077.1;Name=WP_015729077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165399.1;locus_tag=CYJ00_RS02345;product=hypothetical protein;protein_id=WP_015729077.1;transl_table=11
##sequence-region NZ_PJUS02000048.1 1 17218
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000048.1	RefSeq	region	1	17218	.	+	.	ID=NZ_PJUS02000048.1:1..17218;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000048.1	RefSeq	gene	120	848	.	+	.	ID=gene-CYJ00_RS01335;Name=CYJ00_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01335;old_locus_tag=CYJ00_001335
NZ_PJUS02000048.1	Protein Homology	CDS	120	848	.	+	0	ID=cds-WP_014613368.1;Parent=gene-CYJ00_RS01335;Dbxref=GenBank:WP_014613368.1;Name=WP_014613368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613368.1;locus_tag=CYJ00_RS01335;product=hypothetical protein;protein_id=WP_014613368.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	898	2106	.	-	.	ID=gene-CYJ00_RS01340;Name=CYJ00_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01340;old_locus_tag=CYJ00_001340
NZ_PJUS02000048.1	Protein Homology	CDS	898	2106	.	-	0	ID=cds-WP_014613369.1;Parent=gene-CYJ00_RS01340;Dbxref=GenBank:WP_014613369.1;Name=WP_014613369.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165823.1;locus_tag=CYJ00_RS01340;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_014613369.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	2260	3330	.	+	.	ID=gene-CYJ00_RS01345;Name=CYJ00_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01345;old_locus_tag=CYJ00_001345
NZ_PJUS02000048.1	Protein Homology	CDS	2260	3330	.	+	0	ID=cds-WP_014613370.1;Parent=gene-CYJ00_RS01345;Dbxref=GenBank:WP_014613370.1;Name=WP_014613370.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=CYJ00_RS01345;product=D-alanine--D-alanine ligase;protein_id=WP_014613370.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	3342	4706	.	+	.	ID=gene-CYJ00_RS01350;Name=CYJ00_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01350;old_locus_tag=CYJ00_001350
NZ_PJUS02000048.1	Protein Homology	CDS	3342	4706	.	+	0	ID=cds-WP_014613371.1;Parent=gene-CYJ00_RS01350;Dbxref=GenBank:WP_014613371.1;Name=WP_014613371.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729431.1;locus_tag=CYJ00_RS01350;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_014613371.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	4987	6474	.	+	.	ID=gene-CYJ00_RS01355;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01355;old_locus_tag=CYJ00_001355
NZ_PJUS02000048.1	Protein Homology	CDS	4987	6474	.	+	0	ID=cds-WP_014613372.1;Parent=gene-CYJ00_RS01355;Dbxref=GenBank:WP_014613372.1;Name=WP_014613372.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=CYJ00_RS01355;product=degradosome RNA helicase CshA;protein_id=WP_014613372.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	6713	7186	.	+	.	ID=gene-CYJ00_RS01360;Name=CYJ00_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01360;old_locus_tag=CYJ00_001360
NZ_PJUS02000048.1	Protein Homology	CDS	6713	7186	.	+	0	ID=cds-WP_014613373.1;Parent=gene-CYJ00_RS01360;Dbxref=GenBank:WP_014613373.1;Name=WP_014613373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165827.1;locus_tag=CYJ00_RS01360;product=PH domain-containing protein;protein_id=WP_014613373.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	7179	8708	.	+	.	ID=gene-CYJ00_RS01365;Name=CYJ00_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01365;old_locus_tag=CYJ00_001365
NZ_PJUS02000048.1	Protein Homology	CDS	7179	8708	.	+	0	ID=cds-WP_099997491.1;Parent=gene-CYJ00_RS01365;Dbxref=GenBank:WP_099997491.1;Name=WP_099997491.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613374.1;locus_tag=CYJ00_RS01365;product=PH domain-containing protein;protein_id=WP_099997491.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	8692	9210	.	+	.	ID=gene-CYJ00_RS01370;Name=CYJ00_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01370;old_locus_tag=CYJ00_001370
NZ_PJUS02000048.1	Protein Homology	CDS	8692	9210	.	+	0	ID=cds-WP_014613375.1;Parent=gene-CYJ00_RS01370;Dbxref=GenBank:WP_014613375.1;Name=WP_014613375.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165829.1;locus_tag=CYJ00_RS01370;product=PH domain-containing protein;protein_id=WP_014613375.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	9207	9557	.	+	.	ID=gene-CYJ00_RS01375;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CYJ00_RS01375;old_locus_tag=CYJ00_001375
NZ_PJUS02000048.1	Protein Homology	CDS	9207	9557	.	+	0	ID=cds-WP_014613376.1;Parent=gene-CYJ00_RS01375;Dbxref=GenBank:WP_014613376.1;Name=WP_014613376.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165830.1;locus_tag=CYJ00_RS01375;product=holo-ACP synthase;protein_id=WP_014613376.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	9591	10739	.	+	.	ID=gene-CYJ00_RS01380;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ00_RS01380;old_locus_tag=CYJ00_001380
NZ_PJUS02000048.1	Protein Homology	CDS	9591	10739	.	+	0	ID=cds-WP_014613377.1;Parent=gene-CYJ00_RS01380;Dbxref=GenBank:WP_014613377.1;Name=WP_014613377.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=CYJ00_RS01380;product=alanine racemase;protein_id=WP_014613377.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	10824	10994	.	+	.	ID=gene-CYJ00_RS01385;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=CYJ00_RS01385;old_locus_tag=CYJ00_001385
NZ_PJUS02000048.1	Protein Homology	CDS	10824	10994	.	+	0	ID=cds-WP_014613378.1;Parent=gene-CYJ00_RS01385;Dbxref=GenBank:WP_014613378.1;Name=WP_014613378.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=CYJ00_RS01385;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_014613378.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	10995	11348	.	+	.	ID=gene-CYJ00_RS01390;Name=CYJ00_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01390;old_locus_tag=CYJ00_001390
NZ_PJUS02000048.1	Protein Homology	CDS	10995	11348	.	+	0	ID=cds-WP_014613379.1;Parent=gene-CYJ00_RS01390;Dbxref=GenBank:WP_014613379.1;Name=WP_014613379.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=CYJ00_RS01390;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014613379.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	11406	12410	.	+	.	ID=gene-CYJ00_RS01395;Name=CYJ00_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01395;old_locus_tag=CYJ00_001395
NZ_PJUS02000048.1	Protein Homology	CDS	11406	12410	.	+	0	ID=cds-WP_014613380.1;Parent=gene-CYJ00_RS01395;Dbxref=GenBank:WP_014613380.1;Name=WP_014613380.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613380.1;locus_tag=CYJ00_RS01395;product=SpoIIE family protein phosphatase;protein_id=WP_014613380.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	12489	12815	.	+	.	ID=gene-CYJ00_RS01400;Name=CYJ00_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01400;old_locus_tag=CYJ00_001400
NZ_PJUS02000048.1	Protein Homology	CDS	12489	12815	.	+	0	ID=cds-WP_014613381.1;Parent=gene-CYJ00_RS01400;Dbxref=GenBank:WP_014613381.1;Name=WP_014613381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CYJ00_RS01400;product=anti-sigma factor antagonist;protein_id=WP_014613381.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	12815	13294	.	+	.	ID=gene-CYJ00_RS01405;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=CYJ00_RS01405;old_locus_tag=CYJ00_001405
NZ_PJUS02000048.1	Protein Homology	CDS	12815	13294	.	+	0	ID=cds-WP_031253870.1;Parent=gene-CYJ00_RS01405;Dbxref=GenBank:WP_031253870.1;Name=WP_031253870.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169269.1;locus_tag=CYJ00_RS01405;product=anti-sigma B factor RsbW;protein_id=WP_031253870.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	13269	14039	.	+	.	ID=gene-CYJ00_RS01410;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01410;old_locus_tag=CYJ00_001410
NZ_PJUS02000048.1	Protein Homology	CDS	13269	14039	.	+	0	ID=cds-WP_015729428.1;Parent=gene-CYJ00_RS01410;Dbxref=GenBank:WP_015729428.1;Name=WP_015729428.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CYJ00_RS01410;product=RNA polymerase sigma factor SigB;protein_id=WP_015729428.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	14318	16468	.	+	.	ID=gene-CYJ00_RS01415;Name=CYJ00_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01415;old_locus_tag=CYJ00_001415
NZ_PJUS02000048.1	Protein Homology	CDS	14318	16468	.	+	0	ID=cds-WP_063284941.1;Parent=gene-CYJ00_RS01415;Dbxref=GenBank:WP_063284941.1;Name=WP_063284941.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505949.1;locus_tag=CYJ00_RS01415;product=Tex family protein;protein_id=WP_063284941.1;transl_table=11
NZ_PJUS02000048.1	RefSeq	gene	16461	16913	.	+	.	ID=gene-CYJ00_RS01420;Name=CYJ00_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01420;old_locus_tag=CYJ00_001420
NZ_PJUS02000048.1	Protein Homology	CDS	16461	16913	.	+	0	ID=cds-WP_015729426.1;Parent=gene-CYJ00_RS01420;Dbxref=GenBank:WP_015729426.1;Name=WP_015729426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219959.1;locus_tag=CYJ00_RS01420;product=SprT family protein;protein_id=WP_015729426.1;transl_table=11
##sequence-region NZ_PJUS02000023.1 1 2573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000023.1	RefSeq	region	1	2573	.	+	.	ID=NZ_PJUS02000023.1:1..2573;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000023.1	RefSeq	gene	122	226	.	-	.	ID=gene-CYJ00_RS14060;Name=CYJ00_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14060
NZ_PJUS02000023.1	Protein Homology	CDS	122	226	.	-	0	ID=cds-WP_442256760.1;Parent=gene-CYJ00_RS14060;Dbxref=GenBank:WP_442256760.1;Name=WP_442256760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=CYJ00_RS14060;product=hypothetical protein;protein_id=WP_442256760.1;transl_table=11
NZ_PJUS02000023.1	RefSeq	gene	270	944	.	+	.	ID=gene-CYJ00_RS00645;Name=CYJ00_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00645;old_locus_tag=CYJ00_000645
NZ_PJUS02000023.1	Protein Homology	CDS	270	944	.	+	0	ID=cds-WP_101458015.1;Parent=gene-CYJ00_RS00645;Dbxref=GenBank:WP_101458015.1;Name=WP_101458015.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CYJ00_RS00645;product=IS6-like element IS257 family transposase;protein_id=WP_101458015.1;transl_table=11
NZ_PJUS02000023.1	RefSeq	gene	1064	1756	.	-	.	ID=gene-CYJ00_RS00650;Name=CYJ00_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00650;old_locus_tag=CYJ00_000650
NZ_PJUS02000023.1	Protein Homology	CDS	1064	1756	.	-	0	ID=cds-WP_011867731.1;Parent=gene-CYJ00_RS00650;Dbxref=GenBank:WP_011867731.1;Name=WP_011867731.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003125448.1;locus_tag=CYJ00_RS00650;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011867731.1;transl_table=11
NZ_PJUS02000023.1	RefSeq	gene	1773	2324	.	-	.	ID=gene-CYJ00_RS00655;Name=CYJ00_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00655;old_locus_tag=CYJ00_000655
NZ_PJUS02000023.1	Protein Homology	CDS	1773	2324	.	-	0	ID=cds-WP_015728978.1;Parent=gene-CYJ00_RS00655;Dbxref=GenBank:WP_015728978.1;Name=WP_015728978.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005470383.1;locus_tag=CYJ00_RS00655;product=Dps family protein;protein_id=WP_015728978.1;transl_table=11
NZ_PJUS02000023.1	RefSeq	gene	2326	2562	.	-	.	ID=gene-CYJ00_RS00660;Name=CYJ00_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00660;old_locus_tag=CYJ00_000660
NZ_PJUS02000023.1	Protein Homology	CDS	2326	2562	.	-	0	ID=cds-WP_015728977.1;Parent=gene-CYJ00_RS00660;Dbxref=GenBank:WP_015728977.1;Name=WP_015728977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209103.1;locus_tag=CYJ00_RS00660;product=heavy-metal-associated domain-containing protein;protein_id=WP_015728977.1;transl_table=11
##sequence-region NZ_PJUS02000131.1 1 15200
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000131.1	RefSeq	region	1	15200	.	+	.	ID=NZ_PJUS02000131.1:1..15200;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000131.1	RefSeq	gene	1	505	.	-	.	ID=gene-CYJ00_RS03635;Name=CYJ00_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03635;old_locus_tag=CYJ00_003640;partial=true;start_range=.,1
NZ_PJUS02000131.1	Protein Homology	CDS	1	505	.	-	0	ID=cds-WP_274539973.1;Parent=gene-CYJ00_RS03635;Dbxref=GenBank:WP_274539973.1;Name=WP_274539973.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=CYJ00_RS03635;partial=true;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_274539973.1;start_range=.,1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	599	844	.	+	.	ID=gene-CYJ00_RS03640;Name=CYJ00_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03640;old_locus_tag=CYJ00_003645
NZ_PJUS02000131.1	Protein Homology	CDS	599	844	.	+	0	ID=cds-WP_014614220.1;Parent=gene-CYJ00_RS03640;Dbxref=GenBank:WP_014614220.1;Name=WP_014614220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614220.1;locus_tag=CYJ00_RS03640;product=YlbG family protein;protein_id=WP_014614220.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	847	1236	.	-	.	ID=gene-CYJ00_RS03645;Name=CYJ00_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03645;old_locus_tag=CYJ00_003650
NZ_PJUS02000131.1	Protein Homology	CDS	847	1236	.	-	0	ID=cds-WP_014614219.1;Parent=gene-CYJ00_RS03645;Dbxref=GenBank:WP_014614219.1;Name=WP_014614219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=CYJ00_RS03645;product=DUF7147 family protein;protein_id=WP_014614219.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	1299	1850	.	+	.	ID=gene-CYJ00_RS03650;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CYJ00_RS03650;old_locus_tag=CYJ00_003655
NZ_PJUS02000131.1	Protein Homology	CDS	1299	1850	.	+	0	ID=cds-WP_014614218.1;Parent=gene-CYJ00_RS03650;Dbxref=GenBank:WP_014614218.1;Name=WP_014614218.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=CYJ00_RS03650;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_014614218.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	1843	2334	.	+	.	ID=gene-CYJ00_RS03655;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CYJ00_RS03655;old_locus_tag=CYJ00_003660
NZ_PJUS02000131.1	Protein Homology	CDS	1843	2334	.	+	0	ID=cds-WP_014614217.1;Parent=gene-CYJ00_RS03655;Dbxref=GenBank:WP_014614217.1;Name=WP_014614217.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=CYJ00_RS03655;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014614217.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	2668	3804	.	-	.	ID=gene-CYJ00_RS03660;Name=CYJ00_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03660;old_locus_tag=CYJ00_003665
NZ_PJUS02000131.1	Protein Homology	CDS	2668	3804	.	-	0	ID=cds-WP_037543279.1;Parent=gene-CYJ00_RS03660;Dbxref=GenBank:WP_037543279.1;Name=WP_037543279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728964.1;locus_tag=CYJ00_RS03660;product=nucleotidyltransferase;protein_id=WP_037543279.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	3931	4470	.	+	.	ID=gene-CYJ00_RS03665;Name=CYJ00_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03665;old_locus_tag=CYJ00_003670
NZ_PJUS02000131.1	Protein Homology	CDS	3931	4470	.	+	0	ID=cds-WP_101457710.1;Parent=gene-CYJ00_RS03665;Dbxref=GenBank:WP_101457710.1;Name=WP_101457710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=CYJ00_RS03665;product=YceD family protein;protein_id=WP_101457710.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	4527	4700	.	+	.	ID=gene-CYJ00_RS03670;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CYJ00_RS03670;old_locus_tag=CYJ00_003675
NZ_PJUS02000131.1	Protein Homology	CDS	4527	4700	.	+	0	ID=cds-WP_014614214.1;Parent=gene-CYJ00_RS03670;Dbxref=GenBank:WP_014614214.1;Name=WP_014614214.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CYJ00_RS03670;product=50S ribosomal protein L32;protein_id=WP_014614214.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	4814	5560	.	+	.	ID=gene-CYJ00_RS03675;Name=CYJ00_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03675;old_locus_tag=CYJ00_003680
NZ_PJUS02000131.1	Protein Homology	CDS	4814	5560	.	+	0	ID=cds-WP_096535819.1;Parent=gene-CYJ00_RS03675;Dbxref=GenBank:WP_096535819.1;Name=WP_096535819.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=CYJ00_RS03675;product=TrmH family RNA methyltransferase;protein_id=WP_096535819.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	5969	7039	.	+	.	ID=gene-CYJ00_RS03680;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CYJ00_RS03680;old_locus_tag=CYJ00_003685
NZ_PJUS02000131.1	Protein Homology	CDS	5969	7039	.	+	0	ID=cds-WP_014614212.1;Parent=gene-CYJ00_RS03680;Dbxref=GenBank:WP_014614212.1;Name=WP_014614212.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168152.1;locus_tag=CYJ00_RS03680;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014614212.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	7026	9431	.	+	.	ID=gene-CYJ00_RS03685;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CYJ00_RS03685;old_locus_tag=CYJ00_003690
NZ_PJUS02000131.1	Protein Homology	CDS	7026	9431	.	+	0	ID=cds-WP_101457711.1;Parent=gene-CYJ00_RS03685;Dbxref=GenBank:WP_101457711.1;Name=WP_101457711.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=CYJ00_RS03685;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_101457711.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	9543	10136	.	-	.	ID=gene-CYJ00_RS03690;Name=merB;gbkey=Gene;gene=merB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03690;old_locus_tag=CYJ00_003695
NZ_PJUS02000131.1	Protein Homology	CDS	9543	10136	.	-	0	ID=cds-WP_037543273.1;Parent=gene-CYJ00_RS03690;Dbxref=GenBank:WP_037543273.1;Name=WP_037543273.1;Ontology_term=GO:0018836;gbkey=CDS;gene=merB;go_function=alkylmercury lyase activity|0018836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168150.1;locus_tag=CYJ00_RS03690;product=organomercurial lyase;protein_id=WP_037543273.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	pseudogene	11116	12423	.	-	.	ID=gene-CYJ00_RS03695;Name=lip;end_range=12423,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=CYJ00_RS03695;old_locus_tag=CYJ00_003700;partial=true;pseudo=true
NZ_PJUS02000131.1	Protein Homology	CDS	11116	12423	.	-	0	ID=cds-CYJ00_RS03695;Parent=gene-CYJ00_RS03695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=12423,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497700.1;locus_tag=CYJ00_RS03695;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11
NZ_PJUS02000131.1	RefSeq	pseudogene	12496	12582	.	-	.	ID=gene-CYJ00_RS13890;Name=CYJ00_RS13890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13890;partial=true;pseudo=true;start_range=.,12496
NZ_PJUS02000131.1	Protein Homology	CDS	12496	12582	.	-	0	ID=cds-CYJ00_RS13890;Parent=gene-CYJ00_RS13890;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=CYJ00_RS13890;partial=true;product=YSIRK-type signal peptide-containing protein;pseudo=true;start_range=.,12496;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	13097	14041	.	+	.	ID=gene-CYJ00_RS03700;Name=CYJ00_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03700;old_locus_tag=CYJ00_003705
NZ_PJUS02000131.1	Protein Homology	CDS	13097	14041	.	+	0	ID=cds-WP_096536067.1;Parent=gene-CYJ00_RS03700;Dbxref=GenBank:WP_096536067.1;Name=WP_096536067.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166332.1;locus_tag=CYJ00_RS03700;product=cation diffusion facilitator family transporter;protein_id=WP_096536067.1;transl_table=11
NZ_PJUS02000131.1	RefSeq	gene	14211	15110	.	-	.	ID=gene-CYJ00_RS03705;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CYJ00_RS03705;old_locus_tag=CYJ00_003710
NZ_PJUS02000131.1	Protein Homology	CDS	14211	15110	.	-	0	ID=cds-WP_096536065.1;Parent=gene-CYJ00_RS03705;Dbxref=GenBank:WP_096536065.1;Name=WP_096536065.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612951.1;locus_tag=CYJ00_RS03705;product=urea transporter;protein_id=WP_096536065.1;transl_table=11
##sequence-region NZ_PJUS02000106.1 1 2032
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000106.1	RefSeq	region	1	2032	.	+	.	ID=NZ_PJUS02000106.1:1..2032;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000106.1	RefSeq	pseudogene	19	558	.	+	.	ID=gene-CYJ00_RS02995;Name=CYJ00_RS02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS02995;old_locus_tag=CYJ00_002995;partial=true;pseudo=true;start_range=.,19
NZ_PJUS02000106.1	Protein Homology	CDS	19	558	.	+	0	ID=cds-CYJ00_RS02995;Parent=gene-CYJ00_RS02995;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500659.1;locus_tag=CYJ00_RS02995;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,19;transl_table=11
NZ_PJUS02000106.1	RefSeq	gene	824	1045	.	+	.	ID=gene-CYJ00_RS13540;Name=CYJ00_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13540
NZ_PJUS02000106.1	GeneMarkS-2+	CDS	824	1045	.	+	0	ID=cds-WP_127505155.1;Parent=gene-CYJ00_RS13540;Dbxref=GenBank:WP_127505155.1;Name=WP_127505155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13540;product=hypothetical protein;protein_id=WP_127505155.1;transl_table=11
NZ_PJUS02000106.1	RefSeq	gene	1155	1292	.	+	.	ID=gene-CYJ00_RS14070;Name=CYJ00_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14070
NZ_PJUS02000106.1	Protein Homology	CDS	1155	1292	.	+	0	ID=cds-WP_014614196.1;Parent=gene-CYJ00_RS14070;Dbxref=GenBank:WP_014614196.1;Name=WP_014614196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056917.1;locus_tag=CYJ00_RS14070;product=hypothetical protein;protein_id=WP_014614196.1;transl_table=11
NZ_PJUS02000106.1	RefSeq	pseudogene	1328	1702	.	-	.	ID=gene-CYJ00_RS03005;Name=CYJ00_RS03005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03005;old_locus_tag=CYJ00_003005;partial=true;pseudo=true;start_range=.,1328
NZ_PJUS02000106.1	Protein Homology	CDS	1328	1702	.	-	0	ID=cds-CYJ00_RS03005;Parent=gene-CYJ00_RS03005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837446.1;locus_tag=CYJ00_RS03005;partial=true;product=recombinase family protein;pseudo=true;start_range=.,1328;transl_table=11
##sequence-region NZ_PJUS02000224.1 1 478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000224.1	RefSeq	region	1	478	.	+	.	ID=NZ_PJUS02000224.1:1..478;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000224.1	RefSeq	pseudogene	1	478	.	+	.	ID=gene-CYJ00_RS13115;Name=CYJ00_RS13115;end_range=478,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13115;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000224.1	GeneMarkS-2+	CDS	1	478	.	+	0	ID=cds-CYJ00_RS13115;Parent=gene-CYJ00_RS13115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=478,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13115;partial=true;product=MSCRAMM family adhesin SdrC;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000249.1 1 10545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000249.1	RefSeq	region	1	10545	.	+	.	ID=NZ_PJUS02000249.1:1..10545;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000249.1	RefSeq	gene	1	2242	.	+	.	ID=gene-CYJ00_RS06840;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CYJ00_RS06840;old_locus_tag=CYJ00_006845;partial=true;start_range=.,1
NZ_PJUS02000249.1	Protein Homology	CDS	1	2242	.	+	1	ID=cds-WP_101457712.1;Parent=gene-CYJ00_RS06840;Dbxref=GenBank:WP_101457712.1;Name=WP_101457712.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=CYJ00_RS06840;partial=true;product=transcription-repair coupling factor;protein_id=WP_101457712.1;start_range=.,1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	2232	3764	.	+	.	ID=gene-CYJ00_RS06845;Name=CYJ00_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06845;old_locus_tag=CYJ00_006850
NZ_PJUS02000249.1	Protein Homology	CDS	2232	3764	.	+	0	ID=cds-WP_101457713.1;Parent=gene-CYJ00_RS06845;Dbxref=GenBank:WP_101457713.1;Name=WP_101457713.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=CYJ00_RS06845;product=oligosaccharide flippase family protein;protein_id=WP_101457713.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	3761	4945	.	+	.	ID=gene-CYJ00_RS06850;Name=CYJ00_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06850;old_locus_tag=CYJ00_006855
NZ_PJUS02000249.1	Protein Homology	CDS	3761	4945	.	+	0	ID=cds-WP_101457714.1;Parent=gene-CYJ00_RS06850;Dbxref=GenBank:WP_101457714.1;Name=WP_101457714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614800.1;locus_tag=CYJ00_RS06850;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_101457714.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	4935	5192	.	+	.	ID=gene-CYJ00_RS06855;Name=CYJ00_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06855;old_locus_tag=CYJ00_006860
NZ_PJUS02000249.1	Protein Homology	CDS	4935	5192	.	+	0	ID=cds-WP_014614799.1;Parent=gene-CYJ00_RS06855;Dbxref=GenBank:WP_014614799.1;Name=WP_014614799.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169417.1;locus_tag=CYJ00_RS06855;product=RNA-binding S4 domain-containing protein;protein_id=WP_014614799.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	5220	5609	.	+	.	ID=gene-CYJ00_RS06860;Name=CYJ00_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06860;old_locus_tag=CYJ00_006865
NZ_PJUS02000249.1	Protein Homology	CDS	5220	5609	.	+	0	ID=cds-WP_014614798.1;Parent=gene-CYJ00_RS06860;Dbxref=GenBank:WP_014614798.1;Name=WP_014614798.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165010.1;locus_tag=CYJ00_RS06860;product=FtsB family cell division protein;protein_id=WP_014614798.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	5749	6114	.	+	.	ID=gene-CYJ00_RS06865;Name=CYJ00_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06865;old_locus_tag=CYJ00_006870
NZ_PJUS02000249.1	Protein Homology	CDS	5749	6114	.	+	0	ID=cds-WP_101457715.1;Parent=gene-CYJ00_RS06865;Dbxref=GenBank:WP_101457715.1;Name=WP_101457715.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=CYJ00_RS06865;product=S1 domain-containing RNA-binding protein;protein_id=WP_101457715.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	6197	7486	.	+	.	ID=gene-CYJ00_RS06870;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CYJ00_RS06870;old_locus_tag=CYJ00_006875
NZ_PJUS02000249.1	Protein Homology	CDS	6197	7486	.	+	0	ID=cds-WP_101457716.1;Parent=gene-CYJ00_RS06870;Dbxref=GenBank:WP_101457716.1;Name=WP_101457716.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220126.1;locus_tag=CYJ00_RS06870;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_101457716.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	7476	8015	.	+	.	ID=gene-CYJ00_RS06875;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CYJ00_RS06875;old_locus_tag=CYJ00_006880
NZ_PJUS02000249.1	Protein Homology	CDS	7476	8015	.	+	0	ID=cds-WP_014614795.1;Parent=gene-CYJ00_RS06875;Dbxref=GenBank:WP_014614795.1;Name=WP_014614795.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=CYJ00_RS06875;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014614795.1;transl_table=11
NZ_PJUS02000249.1	RefSeq	gene	8131	10245	.	+	.	ID=gene-CYJ00_RS06880;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=CYJ00_RS06880;old_locus_tag=CYJ00_006885
NZ_PJUS02000249.1	Protein Homology	CDS	8131	10245	.	+	0	ID=cds-WP_015728595.1;Parent=gene-CYJ00_RS06880;Dbxref=GenBank:WP_015728595.1;Name=WP_015728595.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=CYJ00_RS06880;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_015728595.1;transl_table=11
##sequence-region NZ_PJUS02000345.1 1 2219
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000345.1	RefSeq	region	1	2219	.	+	.	ID=NZ_PJUS02000345.1:1..2219;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000345.1	RefSeq	gene	188	1303	.	-	.	ID=gene-CYJ00_RS10575;Name=CYJ00_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10575;old_locus_tag=CYJ00_010580
NZ_PJUS02000345.1	Protein Homology	CDS	188	1303	.	-	0	ID=cds-WP_014614165.1;Parent=gene-CYJ00_RS10575;Dbxref=GenBank:WP_014614165.1;Name=WP_014614165.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614165.1;locus_tag=CYJ00_RS10575;product=Gfo/Idh/MocA family protein;protein_id=WP_014614165.1;transl_table=11
NZ_PJUS02000345.1	RefSeq	gene	1319	2219	.	-	.	ID=gene-CYJ00_RS10580;Name=CYJ00_RS10580;end_range=2219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10580;old_locus_tag=CYJ00_010585;partial=true
NZ_PJUS02000345.1	Protein Homology	CDS	1319	2219	.	-	1	ID=cds-WP_198597695.1;Parent=gene-CYJ00_RS10580;Dbxref=GenBank:WP_198597695.1;Name=WP_198597695.1;Ontology_term=GO:0005975,GO:0004308;end_range=2219,.;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614166.1;locus_tag=CYJ00_RS10580;partial=true;product=sialidase family protein;protein_id=WP_198597695.1;transl_table=11
##sequence-region NZ_PJUS02000053.1 1 2913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000053.1	RefSeq	region	1	2913	.	+	.	ID=NZ_PJUS02000053.1:1..2913;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000053.1	RefSeq	gene	1	272	.	-	.	ID=gene-CYJ00_RS01460;Name=CYJ00_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01460;old_locus_tag=CYJ00_001460;partial=true;start_range=.,1
NZ_PJUS02000053.1	GeneMarkS-2+	CDS	1	272	.	-	0	ID=cds-WP_133158309.1;Parent=gene-CYJ00_RS01460;Dbxref=GenBank:WP_133158309.1;Name=WP_133158309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS01460;partial=true;product=hypothetical protein;protein_id=WP_133158309.1;start_range=.,1;transl_table=11
NZ_PJUS02000053.1	RefSeq	gene	282	452	.	-	.	ID=gene-CYJ00_RS13080;Name=CYJ00_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13080
NZ_PJUS02000053.1	GeneMarkS-2+	CDS	282	452	.	-	0	ID=cds-WP_157938996.1;Parent=gene-CYJ00_RS13080;Dbxref=GenBank:WP_157938996.1;Name=WP_157938996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13080;product=hypothetical protein;protein_id=WP_157938996.1;transl_table=11
NZ_PJUS02000053.1	RefSeq	gene	1082	1354	.	-	.	ID=gene-CYJ00_RS01465;Name=CYJ00_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01465;old_locus_tag=CYJ00_001465
NZ_PJUS02000053.1	Protein Homology	CDS	1082	1354	.	-	0	ID=cds-WP_096533714.1;Parent=gene-CYJ00_RS01465;Dbxref=GenBank:WP_096533714.1;Name=WP_096533714.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF046164.3;locus_tag=CYJ00_RS01465;product=plasmid mobilization protein;protein_id=WP_096533714.1;transl_table=11
NZ_PJUS02000053.1	RefSeq	gene	1691	2614	.	-	.	ID=gene-CYJ00_RS01470;Name=CYJ00_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01470;old_locus_tag=CYJ00_001470
NZ_PJUS02000053.1	Protein Homology	CDS	1691	2614	.	-	0	ID=cds-WP_096533715.1;Parent=gene-CYJ00_RS01470;Dbxref=GenBank:WP_096533715.1;Name=WP_096533715.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417608.1;locus_tag=CYJ00_RS01470;product=protein rep;protein_id=WP_096533715.1;transl_table=11
##sequence-region NZ_PJUS02000280.1 1 12761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000280.1	RefSeq	region	1	12761	.	+	.	ID=NZ_PJUS02000280.1:1..12761;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000280.1	RefSeq	gene	1	532	.	-	.	ID=gene-CYJ00_RS07455;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07455;old_locus_tag=CYJ00_007460;partial=true;start_range=.,1
NZ_PJUS02000280.1	Protein Homology	CDS	1	532	.	-	0	ID=cds-WP_101457717.1;Parent=gene-CYJ00_RS07455;Dbxref=GenBank:WP_101457717.1;Name=WP_101457717.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167537.1;locus_tag=CYJ00_RS07455;partial=true;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_101457717.1;start_range=.,1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	532	1905	.	-	.	ID=gene-CYJ00_RS07460;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CYJ00_RS07460;old_locus_tag=CYJ00_007465
NZ_PJUS02000280.1	Protein Homology	CDS	532	1905	.	-	0	ID=cds-WP_100006624.1;Parent=gene-CYJ00_RS07460;Dbxref=GenBank:WP_100006624.1;Name=WP_100006624.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613389.1;locus_tag=CYJ00_RS07460;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_100006624.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	1909	2958	.	-	.	ID=gene-CYJ00_RS07465;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07465;old_locus_tag=CYJ00_007470
NZ_PJUS02000280.1	Protein Homology	CDS	1909	2958	.	-	0	ID=cds-WP_063278598.1;Parent=gene-CYJ00_RS07465;Dbxref=GenBank:WP_063278598.1;Name=WP_063278598.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=CYJ00_RS07465;product=3-isopropylmalate dehydrogenase;protein_id=WP_063278598.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	2955	4487	.	-	.	ID=gene-CYJ00_RS07470;Name=CYJ00_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07470;old_locus_tag=CYJ00_007475
NZ_PJUS02000280.1	Protein Homology	CDS	2955	4487	.	-	0	ID=cds-WP_063278597.1;Parent=gene-CYJ00_RS07470;Dbxref=GenBank:WP_063278597.1;Name=WP_063278597.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167540.1;locus_tag=CYJ00_RS07470;product=2-isopropylmalate synthase;protein_id=WP_063278597.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	4509	5513	.	-	.	ID=gene-CYJ00_RS07475;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CYJ00_RS07475;old_locus_tag=CYJ00_007480
NZ_PJUS02000280.1	Protein Homology	CDS	4509	5513	.	-	0	ID=cds-WP_063278596.1;Parent=gene-CYJ00_RS07475;Dbxref=GenBank:WP_063278596.1;Name=WP_063278596.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=CYJ00_RS07475;product=ketol-acid reductoisomerase;protein_id=WP_063278596.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	5548	6021	.	-	.	ID=gene-CYJ00_RS07480;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CYJ00_RS07480;old_locus_tag=CYJ00_007485
NZ_PJUS02000280.1	Protein Homology	CDS	5548	6021	.	-	0	ID=cds-WP_014613393.1;Parent=gene-CYJ00_RS07480;Dbxref=GenBank:WP_014613393.1;Name=WP_014613393.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=CYJ00_RS07480;product=acetolactate synthase small subunit;protein_id=WP_014613393.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	6018	7772	.	-	.	ID=gene-CYJ00_RS07485;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07485;old_locus_tag=CYJ00_007490
NZ_PJUS02000280.1	Protein Homology	CDS	6018	7772	.	-	0	ID=cds-WP_101457718.1;Parent=gene-CYJ00_RS07485;Dbxref=GenBank:WP_101457718.1;Name=WP_101457718.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167542.1;locus_tag=CYJ00_RS07485;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_101457718.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	7793	9481	.	-	.	ID=gene-CYJ00_RS07490;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07490;old_locus_tag=CYJ00_007495
NZ_PJUS02000280.1	Protein Homology	CDS	7793	9481	.	-	0	ID=cds-WP_014613395.1;Parent=gene-CYJ00_RS07490;Dbxref=GenBank:WP_014613395.1;Name=WP_014613395.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=CYJ00_RS07490;product=dihydroxy-acid dehydratase;protein_id=WP_014613395.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	10025	10483	.	+	.	ID=gene-CYJ00_RS07495;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07495;old_locus_tag=CYJ00_007500
NZ_PJUS02000280.1	Protein Homology	CDS	10025	10483	.	+	0	ID=cds-WP_014613396.1;Parent=gene-CYJ00_RS07495;Dbxref=GenBank:WP_014613396.1;Name=WP_014613396.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167544.1;locus_tag=CYJ00_RS07495;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014613396.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	10464	11120	.	+	.	ID=gene-CYJ00_RS07500;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07500;old_locus_tag=CYJ00_007505
NZ_PJUS02000280.1	Protein Homology	CDS	10464	11120	.	+	0	ID=cds-WP_063278594.1;Parent=gene-CYJ00_RS07500;Dbxref=GenBank:WP_063278594.1;Name=WP_063278594.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729420.1;locus_tag=CYJ00_RS07500;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_063278594.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	11099	11569	.	+	.	ID=gene-CYJ00_RS07505;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CYJ00_RS07505;old_locus_tag=CYJ00_007510
NZ_PJUS02000280.1	Protein Homology	CDS	11099	11569	.	+	0	ID=cds-WP_014613398.1;Parent=gene-CYJ00_RS07505;Dbxref=GenBank:WP_014613398.1;Name=WP_014613398.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613398.1;locus_tag=CYJ00_RS07505;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_014613398.1;transl_table=11
NZ_PJUS02000280.1	RefSeq	gene	11562	12584	.	+	.	ID=gene-CYJ00_RS07510;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07510;old_locus_tag=CYJ00_007515
NZ_PJUS02000280.1	Protein Homology	CDS	11562	12584	.	+	0	ID=cds-WP_063278593.1;Parent=gene-CYJ00_RS07510;Dbxref=GenBank:WP_063278593.1;Name=WP_063278593.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=CYJ00_RS07510;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_063278593.1;transl_table=11
##sequence-region NZ_PJUS02000390.1 1 2025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000390.1	RefSeq	region	1	2025	.	+	.	ID=NZ_PJUS02000390.1:1..2025;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000390.1	RefSeq	gene	421	966	.	-	.	ID=gene-CYJ00_RS11520;Name=CYJ00_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11520;old_locus_tag=CYJ00_011525
NZ_PJUS02000390.1	Protein Homology	CDS	421	966	.	-	0	ID=cds-WP_065520720.1;Parent=gene-CYJ00_RS11520;Dbxref=GenBank:WP_065520720.1;Name=WP_065520720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176726.1;locus_tag=CYJ00_RS11520;product=hypothetical protein;protein_id=WP_065520720.1;transl_table=11
NZ_PJUS02000390.1	RefSeq	gene	1196	1393	.	-	.	ID=gene-CYJ00_RS11525;Name=CYJ00_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11525;old_locus_tag=CYJ00_011530
NZ_PJUS02000390.1	Protein Homology	CDS	1196	1393	.	-	0	ID=cds-WP_014614892.1;Parent=gene-CYJ00_RS11525;Dbxref=GenBank:WP_014614892.1;Name=WP_014614892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614892.1;locus_tag=CYJ00_RS11525;product=hypothetical protein;protein_id=WP_014614892.1;transl_table=11
NZ_PJUS02000390.1	RefSeq	gene	1633	1884	.	-	.	ID=gene-CYJ00_RS11530;Name=CYJ00_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11530;old_locus_tag=CYJ00_011535
NZ_PJUS02000390.1	GeneMarkS-2+	CDS	1633	1884	.	-	0	ID=cds-WP_063284551.1;Parent=gene-CYJ00_RS11530;Dbxref=GenBank:WP_063284551.1;Name=WP_063284551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS11530;product=hypothetical protein;protein_id=WP_063284551.1;transl_table=11
##sequence-region NZ_PJUS02000164.1 1 13740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000164.1	RefSeq	region	1	13740	.	+	.	ID=NZ_PJUS02000164.1:1..13740;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000164.1	RefSeq	gene	1	1329	.	+	.	ID=gene-CYJ00_RS04605;Name=CYJ00_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04605;old_locus_tag=CYJ00_004610;partial=true;start_range=.,1
NZ_PJUS02000164.1	Protein Homology	CDS	1	1329	.	+	0	ID=cds-WP_133158328.1;Parent=gene-CYJ00_RS04605;Dbxref=GenBank:WP_133158328.1;Name=WP_133158328.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ00_RS04605;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_133158328.1;start_range=.,1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	1665	3089	.	-	.	ID=gene-CYJ00_RS04610;Name=CYJ00_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04610;old_locus_tag=CYJ00_004615
NZ_PJUS02000164.1	Protein Homology	CDS	1665	3089	.	-	0	ID=cds-WP_101457719.1;Parent=gene-CYJ00_RS04610;Dbxref=GenBank:WP_101457719.1;Name=WP_101457719.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612704.1;locus_tag=CYJ00_RS04610;product=cryptochrome/photolyase family protein;protein_id=WP_101457719.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	3176	3526	.	-	.	ID=gene-CYJ00_RS04615;Name=CYJ00_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04615;old_locus_tag=CYJ00_004620
NZ_PJUS02000164.1	Protein Homology	CDS	3176	3526	.	-	0	ID=cds-WP_015729806.1;Parent=gene-CYJ00_RS04615;Dbxref=GenBank:WP_015729806.1;Name=WP_015729806.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729806.1;locus_tag=CYJ00_RS04615;product=helix-turn-helix domain-containing protein;protein_id=WP_015729806.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	3604	4284	.	+	.	ID=gene-CYJ00_RS04620;Name=CYJ00_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04620;old_locus_tag=CYJ00_004625
NZ_PJUS02000164.1	Protein Homology	CDS	3604	4284	.	+	0	ID=cds-WP_096548362.1;Parent=gene-CYJ00_RS04620;Dbxref=GenBank:WP_096548362.1;Name=WP_096548362.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612706.1;locus_tag=CYJ00_RS04620;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_096548362.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	4309	4974	.	+	.	ID=gene-CYJ00_RS04625;Name=CYJ00_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04625;old_locus_tag=CYJ00_004630
NZ_PJUS02000164.1	Protein Homology	CDS	4309	4974	.	+	0	ID=cds-WP_014612707.1;Parent=gene-CYJ00_RS04625;Dbxref=GenBank:WP_014612707.1;Name=WP_014612707.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723717.1;locus_tag=CYJ00_RS04625;product=SDR family oxidoreductase;protein_id=WP_014612707.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	4978	5982	.	+	.	ID=gene-CYJ00_RS04630;Name=CYJ00_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04630;old_locus_tag=CYJ00_004635
NZ_PJUS02000164.1	Protein Homology	CDS	4978	5982	.	+	0	ID=cds-WP_014612708.1;Parent=gene-CYJ00_RS04630;Dbxref=GenBank:WP_014612708.1;Name=WP_014612708.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434486.1;locus_tag=CYJ00_RS04630;product=NADP-dependent oxidoreductase;protein_id=WP_014612708.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	5993	6349	.	+	.	ID=gene-CYJ00_RS04635;Name=CYJ00_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04635;old_locus_tag=CYJ00_004640
NZ_PJUS02000164.1	Protein Homology	CDS	5993	6349	.	+	0	ID=cds-WP_014612709.1;Parent=gene-CYJ00_RS04635;Dbxref=GenBank:WP_014612709.1;Name=WP_014612709.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467555.1;locus_tag=CYJ00_RS04635;product=DoxX family protein;protein_id=WP_014612709.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	pseudogene	6534	6671	.	+	.	ID=gene-CYJ00_RS13570;Name=CYJ00_RS13570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13570;old_locus_tag=CYJ00_004645;partial=true;pseudo=true;start_range=.,6534
NZ_PJUS02000164.1	Protein Homology	CDS	6534	6671	.	+	0	ID=cds-CYJ00_RS13570;Parent=gene-CYJ00_RS13570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009223422.1;locus_tag=CYJ00_RS13570;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,6534;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	7259	8425	.	+	.	ID=gene-CYJ00_RS04645;Name=CYJ00_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04645;old_locus_tag=CYJ00_004650
NZ_PJUS02000164.1	Protein Homology	CDS	7259	8425	.	+	0	ID=cds-WP_037542054.1;Parent=gene-CYJ00_RS04645;Dbxref=GenBank:WP_037542054.1;Name=WP_037542054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612712.1;locus_tag=CYJ00_RS04645;product=ArgE/DapE family deacylase;protein_id=WP_037542054.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	8673	9143	.	+	.	ID=gene-CYJ00_RS04650;Name=CYJ00_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04650;old_locus_tag=CYJ00_004655
NZ_PJUS02000164.1	Protein Homology	CDS	8673	9143	.	+	0	ID=cds-WP_101457720.1;Parent=gene-CYJ00_RS04650;Dbxref=GenBank:WP_101457720.1;Name=WP_101457720.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612713.1;locus_tag=CYJ00_RS04650;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_101457720.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	9307	10041	.	-	.	ID=gene-CYJ00_RS04655;Name=CYJ00_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04655;old_locus_tag=CYJ00_004660
NZ_PJUS02000164.1	Protein Homology	CDS	9307	10041	.	-	0	ID=cds-WP_096533307.1;Parent=gene-CYJ00_RS04655;Dbxref=GenBank:WP_096533307.1;Name=WP_096533307.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220080.1;locus_tag=CYJ00_RS04655;product=NAD-dependent protein deacylase;protein_id=WP_096533307.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	10551	11279	.	-	.	ID=gene-CYJ00_RS04660;Name=CYJ00_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04660;old_locus_tag=CYJ00_004665
NZ_PJUS02000164.1	Protein Homology	CDS	10551	11279	.	-	0	ID=cds-WP_015729800.1;Parent=gene-CYJ00_RS04660;Dbxref=GenBank:WP_015729800.1;Name=WP_015729800.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165719.1;locus_tag=CYJ00_RS04660;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015729800.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	11298	12239	.	-	.	ID=gene-CYJ00_RS04665;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04665;old_locus_tag=CYJ00_004670
NZ_PJUS02000164.1	Protein Homology	CDS	11298	12239	.	-	0	ID=cds-WP_014612716.1;Parent=gene-CYJ00_RS04665;Dbxref=GenBank:WP_014612716.1;Name=WP_014612716.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612716.1;locus_tag=CYJ00_RS04665;product=carbamate kinase;protein_id=WP_014612716.1;transl_table=11
NZ_PJUS02000164.1	RefSeq	gene	12255	13685	.	-	.	ID=gene-CYJ00_RS04670;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CYJ00_RS04670;old_locus_tag=CYJ00_004675
NZ_PJUS02000164.1	Protein Homology	CDS	12255	13685	.	-	0	ID=cds-WP_014612717.1;Parent=gene-CYJ00_RS04670;Dbxref=GenBank:WP_014612717.1;Name=WP_014612717.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612717.1;locus_tag=CYJ00_RS04670;product=arginine-ornithine antiporter;protein_id=WP_014612717.1;transl_table=11
##sequence-region NZ_PJUS02000070.1 1 11569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000070.1	RefSeq	region	1	11569	.	+	.	ID=NZ_PJUS02000070.1:1..11569;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000070.1	RefSeq	gene	363	791	.	-	.	ID=gene-CYJ00_RS01880;Name=CYJ00_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01880;old_locus_tag=CYJ00_001880
NZ_PJUS02000070.1	Protein Homology	CDS	363	791	.	-	0	ID=cds-WP_014612994.1;Parent=gene-CYJ00_RS01880;Dbxref=GenBank:WP_014612994.1;Name=WP_014612994.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=CYJ00_RS01880;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_014612994.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	1012	2433	.	+	.	ID=gene-CYJ00_RS01885;Name=CYJ00_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01885;old_locus_tag=CYJ00_001885
NZ_PJUS02000070.1	Protein Homology	CDS	1012	2433	.	+	0	ID=cds-WP_101457721.1;Parent=gene-CYJ00_RS01885;Dbxref=GenBank:WP_101457721.1;Name=WP_101457721.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165921.1;locus_tag=CYJ00_RS01885;product=FAD-binding oxidoreductase;protein_id=WP_101457721.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	2423	3703	.	+	.	ID=gene-CYJ00_RS01890;Name=CYJ00_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01890;old_locus_tag=CYJ00_001890
NZ_PJUS02000070.1	Protein Homology	CDS	2423	3703	.	+	0	ID=cds-WP_101457722.1;Parent=gene-CYJ00_RS01890;Dbxref=GenBank:WP_101457722.1;Name=WP_101457722.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612996.1;locus_tag=CYJ00_RS01890;product=(Fe-S)-binding protein;protein_id=WP_101457722.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	3859	5652	.	+	.	ID=gene-CYJ00_RS01895;Name=CYJ00_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01895;old_locus_tag=CYJ00_001895
NZ_PJUS02000070.1	Protein Homology	CDS	3859	5652	.	+	0	ID=cds-WP_065354018.1;Parent=gene-CYJ00_RS01895;Dbxref=GenBank:WP_065354018.1;Name=WP_065354018.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165924.1;locus_tag=CYJ00_RS01895;product=ABC transporter ATP-binding protein;protein_id=WP_065354018.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	5633	7411	.	+	.	ID=gene-CYJ00_RS01900;Name=CYJ00_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01900;old_locus_tag=CYJ00_001900
NZ_PJUS02000070.1	Protein Homology	CDS	5633	7411	.	+	0	ID=cds-WP_101457723.1;Parent=gene-CYJ00_RS01900;Dbxref=GenBank:WP_101457723.1;Name=WP_101457723.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612998.1;locus_tag=CYJ00_RS01900;product=ABC transporter ATP-binding protein;protein_id=WP_101457723.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	8095	8514	.	-	.	ID=gene-CYJ00_RS13520;Name=CYJ00_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13520
NZ_PJUS02000070.1	Protein Homology	CDS	8095	8514	.	-	0	ID=cds-WP_241956929.1;Parent=gene-CYJ00_RS13520;Dbxref=GenBank:WP_241956929.1;Name=WP_241956929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019359.7;locus_tag=CYJ00_RS13520;product=TipAS antibiotic-recognition domain-containing protein;protein_id=WP_241956929.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	8551	8835	.	-	.	ID=gene-CYJ00_RS13525;Name=CYJ00_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13525
NZ_PJUS02000070.1	Protein Homology	CDS	8551	8835	.	-	0	ID=cds-WP_241956930.1;Parent=gene-CYJ00_RS13525;Dbxref=GenBank:WP_241956930.1;Name=WP_241956930.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=CYJ00_RS13525;product=MerR family transcriptional regulator;protein_id=WP_241956930.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	9385	9816	.	-	.	ID=gene-CYJ00_RS01915;Name=CYJ00_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01915;old_locus_tag=CYJ00_001915
NZ_PJUS02000070.1	Protein Homology	CDS	9385	9816	.	-	0	ID=cds-WP_031253602.1;Parent=gene-CYJ00_RS01915;Dbxref=GenBank:WP_031253602.1;Name=WP_031253602.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=CYJ00_RS01915;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_031253602.1;transl_table=11
NZ_PJUS02000070.1	RefSeq	gene	10173	11567	.	-	.	ID=gene-CYJ00_RS01920;Name=CYJ00_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01920;old_locus_tag=CYJ00_001920
NZ_PJUS02000070.1	Protein Homology	CDS	10173	11567	.	-	0	ID=cds-WP_014613001.1;Parent=gene-CYJ00_RS01920;Dbxref=GenBank:WP_014613001.1;Name=WP_014613001.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166345.1;locus_tag=CYJ00_RS01920;product=alanine/glycine:cation symporter family protein;protein_id=WP_014613001.1;transl_table=11
##sequence-region NZ_PJUS02000042.1 1 288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000042.1	RefSeq	region	1	288	.	+	.	ID=NZ_PJUS02000042.1:1..288;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000042.1	RefSeq	gene	1	288	.	+	.	ID=gene-CYJ00_RS13075;Name=CYJ00_RS13075;end_range=288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13075;partial=true;start_range=.,1
NZ_PJUS02000042.1	GeneMarkS-2+	CDS	1	288	.	+	1	ID=cds-WP_157938995.1;Parent=gene-CYJ00_RS13075;Dbxref=GenBank:WP_157938995.1;Name=WP_157938995.1;end_range=288,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13075;partial=true;product=hypothetical protein;protein_id=WP_157938995.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000221.1 1 21250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000221.1	RefSeq	region	1	21250	.	+	.	ID=NZ_PJUS02000221.1:1..21250;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000221.1	RefSeq	gene	278	913	.	-	.	ID=gene-CYJ00_RS06110;Name=CYJ00_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06110;old_locus_tag=CYJ00_006115
NZ_PJUS02000221.1	Protein Homology	CDS	278	913	.	-	0	ID=cds-WP_014612883.1;Parent=gene-CYJ00_RS06110;Dbxref=GenBank:WP_014612883.1;Name=WP_014612883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729699.1;locus_tag=CYJ00_RS06110;product=hypothetical protein;protein_id=WP_014612883.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	1361	2782	.	+	.	ID=gene-CYJ00_RS06115;Name=CYJ00_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06115;old_locus_tag=CYJ00_006120
NZ_PJUS02000221.1	Protein Homology	CDS	1361	2782	.	+	0	ID=cds-WP_063278623.1;Parent=gene-CYJ00_RS06115;Dbxref=GenBank:WP_063278623.1;Name=WP_063278623.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612884.1;locus_tag=CYJ00_RS06115;product=alkaline phosphatase;protein_id=WP_063278623.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	2935	3327	.	+	.	ID=gene-CYJ00_RS06120;Name=CYJ00_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06120;old_locus_tag=CYJ00_006125
NZ_PJUS02000221.1	Protein Homology	CDS	2935	3327	.	+	0	ID=cds-WP_014612885.1;Parent=gene-CYJ00_RS06120;Dbxref=GenBank:WP_014612885.1;Name=WP_014612885.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612885.1;locus_tag=CYJ00_RS06120;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_014612885.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	3332	6196	.	+	.	ID=gene-CYJ00_RS06125;Name=CYJ00_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06125;old_locus_tag=CYJ00_006130
NZ_PJUS02000221.1	Protein Homology	CDS	3332	6196	.	+	0	ID=cds-WP_096536246.1;Parent=gene-CYJ00_RS06125;Dbxref=GenBank:WP_096536246.1;Name=WP_096536246.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=CYJ00_RS06125;product=DEAD/DEAH box helicase;protein_id=WP_096536246.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	6358	7680	.	+	.	ID=gene-CYJ00_RS06130;Name=CYJ00_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06130;old_locus_tag=CYJ00_006135
NZ_PJUS02000221.1	Protein Homology	CDS	6358	7680	.	+	0	ID=cds-WP_014612887.1;Parent=gene-CYJ00_RS06130;Dbxref=GenBank:WP_014612887.1;Name=WP_014612887.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167072.1;locus_tag=CYJ00_RS06130;product=Nramp family divalent metal transporter;protein_id=WP_014612887.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	8093	9697	.	+	.	ID=gene-CYJ00_RS06135;Name=CYJ00_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06135;old_locus_tag=CYJ00_006140
NZ_PJUS02000221.1	Protein Homology	CDS	8093	9697	.	+	0	ID=cds-WP_031253566.1;Parent=gene-CYJ00_RS06135;Dbxref=GenBank:WP_031253566.1;Name=WP_031253566.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384111.1;locus_tag=CYJ00_RS06135;product=BCCT family transporter;protein_id=WP_031253566.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	10733	11284	.	-	.	ID=gene-CYJ00_RS06140;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=CYJ00_RS06140;old_locus_tag=CYJ00_006145
NZ_PJUS02000221.1	Protein Homology	CDS	10733	11284	.	-	0	ID=cds-WP_014612890.1;Parent=gene-CYJ00_RS06140;Dbxref=GenBank:WP_014612890.1;Name=WP_014612890.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168438.1;locus_tag=CYJ00_RS06140;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_014612890.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	11506	12999	.	+	.	ID=gene-CYJ00_RS06145;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06145;old_locus_tag=CYJ00_006150
NZ_PJUS02000221.1	Protein Homology	CDS	11506	12999	.	+	0	ID=cds-WP_014612891.1;Parent=gene-CYJ00_RS06145;Dbxref=GenBank:WP_014612891.1;Name=WP_014612891.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167076.1;locus_tag=CYJ00_RS06145;product=betaine-aldehyde dehydrogenase;protein_id=WP_014612891.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	13127	14821	.	+	.	ID=gene-CYJ00_RS06150;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06150;old_locus_tag=CYJ00_006155
NZ_PJUS02000221.1	Protein Homology	CDS	13127	14821	.	+	0	ID=cds-WP_014612892.1;Parent=gene-CYJ00_RS06150;Dbxref=GenBank:WP_014612892.1;Name=WP_014612892.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=CYJ00_RS06150;product=choline dehydrogenase;protein_id=WP_014612892.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	15171	16172	.	+	.	ID=gene-CYJ00_RS06155;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ00_RS06155;old_locus_tag=CYJ00_006160
NZ_PJUS02000221.1	Protein Homology	CDS	15171	16172	.	+	0	ID=cds-WP_179300491.1;Parent=gene-CYJ00_RS06155;Dbxref=GenBank:WP_179300491.1;Name=WP_179300491.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508858.1;locus_tag=CYJ00_RS06155;product=ornithine carbamoyltransferase;protein_id=WP_179300491.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	16286	16915	.	-	.	ID=gene-CYJ00_RS13915;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CYJ00_RS13915;old_locus_tag=CYJ00_006165
NZ_PJUS02000221.1	Protein Homology	CDS	16286	16915	.	-	0	ID=cds-WP_096548509.1;Parent=gene-CYJ00_RS13915;Dbxref=GenBank:WP_096548509.1;Name=WP_096548509.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=CYJ00_RS13915;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_096548509.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	16906	17670	.	-	.	ID=gene-CYJ00_RS13920;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CYJ00_RS13920;old_locus_tag=CYJ00_006170
NZ_PJUS02000221.1	Protein Homology	CDS	16906	17670	.	-	0	ID=cds-WP_014612895.1;Parent=gene-CYJ00_RS13920;Dbxref=GenBank:WP_014612895.1;Name=WP_014612895.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168443.1;locus_tag=CYJ00_RS13920;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_014612895.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	17667	18371	.	-	.	ID=gene-CYJ00_RS06170;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06170;old_locus_tag=CYJ00_006175
NZ_PJUS02000221.1	Protein Homology	CDS	17667	18371	.	-	0	ID=cds-WP_014612896.1;Parent=gene-CYJ00_RS06170;Dbxref=GenBank:WP_014612896.1;Name=WP_014612896.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=CYJ00_RS06170;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_014612896.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	18364	18939	.	-	.	ID=gene-CYJ00_RS06175;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CYJ00_RS06175;old_locus_tag=CYJ00_006180
NZ_PJUS02000221.1	Protein Homology	CDS	18364	18939	.	-	0	ID=cds-WP_014612897.1;Parent=gene-CYJ00_RS06175;Dbxref=GenBank:WP_014612897.1;Name=WP_014612897.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=CYJ00_RS06175;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_014612897.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	18936	19517	.	-	.	ID=gene-CYJ00_RS06180;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06180;old_locus_tag=CYJ00_006185
NZ_PJUS02000221.1	Protein Homology	CDS	18936	19517	.	-	0	ID=cds-WP_014612898.1;Parent=gene-CYJ00_RS06180;Dbxref=GenBank:WP_014612898.1;Name=WP_014612898.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167083.1;locus_tag=CYJ00_RS06180;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_014612898.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	19501	20514	.	-	.	ID=gene-CYJ00_RS06185;Name=CYJ00_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06185;old_locus_tag=CYJ00_006190
NZ_PJUS02000221.1	Protein Homology	CDS	19501	20514	.	-	0	ID=cds-WP_014612899.1;Parent=gene-CYJ00_RS06185;Dbxref=GenBank:WP_014612899.1;Name=WP_014612899.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=CYJ00_RS06185;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014612899.1;transl_table=11
NZ_PJUS02000221.1	RefSeq	gene	20511	21250	.	-	.	ID=gene-CYJ00_RS06190;Name=hisD;end_range=21250,.;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CYJ00_RS06190;old_locus_tag=CYJ00_006195;partial=true
NZ_PJUS02000221.1	Protein Homology	CDS	20511	21250	.	-	2	ID=cds-WP_101457643.1;Parent=gene-CYJ00_RS06190;Dbxref=GenBank:WP_101457643.1;Name=WP_101457643.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;end_range=21250,.;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=CYJ00_RS06190;partial=true;product=histidinol dehydrogenase;protein_id=WP_101457643.1;transl_table=11
##sequence-region NZ_PJUS02000401.1 1 16198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000401.1	RefSeq	region	1	16198	.	+	.	ID=NZ_PJUS02000401.1:1..16198;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000401.1	RefSeq	gene	1	600	.	+	.	ID=gene-CYJ00_RS11740;Name=CYJ00_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11740;old_locus_tag=CYJ00_011745;partial=true;start_range=.,1
NZ_PJUS02000401.1	Protein Homology	CDS	1	600	.	+	0	ID=cds-WP_101457724.1;Parent=gene-CYJ00_RS11740;Dbxref=GenBank:WP_101457724.1;Name=WP_101457724.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729408.1;locus_tag=CYJ00_RS11740;partial=true;product=S8 family serine peptidase;protein_id=WP_101457724.1;start_range=.,1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	828	2060	.	-	.	ID=gene-CYJ00_RS11745;Name=CYJ00_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11745;old_locus_tag=CYJ00_011750
NZ_PJUS02000401.1	Protein Homology	CDS	828	2060	.	-	0	ID=cds-WP_015729407.1;Parent=gene-CYJ00_RS11745;Dbxref=GenBank:WP_015729407.1;Name=WP_015729407.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166413.1;locus_tag=CYJ00_RS11745;product=acetylornithine deacetylase;protein_id=WP_015729407.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	2041	2562	.	-	.	ID=gene-CYJ00_RS11750;Name=CYJ00_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11750;old_locus_tag=CYJ00_011755
NZ_PJUS02000401.1	Protein Homology	CDS	2041	2562	.	-	0	ID=cds-WP_014613423.1;Parent=gene-CYJ00_RS11750;Dbxref=GenBank:WP_014613423.1;Name=WP_014613423.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613423.1;locus_tag=CYJ00_RS11750;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_014613423.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	2578	3402	.	-	.	ID=gene-CYJ00_RS11755;Name=CYJ00_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11755;old_locus_tag=CYJ00_011760
NZ_PJUS02000401.1	Protein Homology	CDS	2578	3402	.	-	0	ID=cds-WP_065354129.1;Parent=gene-CYJ00_RS11755;Dbxref=GenBank:WP_065354129.1;Name=WP_065354129.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=CYJ00_RS11755;product=SPL family radical SAM protein;protein_id=WP_065354129.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	3461	4750	.	-	.	ID=gene-CYJ00_RS11760;Name=CYJ00_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11760;old_locus_tag=CYJ00_011765
NZ_PJUS02000401.1	Protein Homology	CDS	3461	4750	.	-	0	ID=cds-WP_020219904.1;Parent=gene-CYJ00_RS11760;Dbxref=GenBank:WP_020219904.1;Name=WP_020219904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=CYJ00_RS11760;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_020219904.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	4964	5095	.	+	.	ID=gene-CYJ00_RS13780;Name=CYJ00_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13780
NZ_PJUS02000401.1	Protein Homology	CDS	4964	5095	.	+	0	ID=cds-WP_020219903.1;Parent=gene-CYJ00_RS13780;Dbxref=GenBank:WP_020219903.1;Name=WP_020219903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047567.1;locus_tag=CYJ00_RS13780;product=Trp-rich small protein;protein_id=WP_020219903.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	5354	5527	.	+	.	ID=gene-CYJ00_RS13375;Name=CYJ00_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13375
NZ_PJUS02000401.1	Protein Homology	CDS	5354	5527	.	+	0	ID=cds-WP_014613426.1;Parent=gene-CYJ00_RS13375;Dbxref=GenBank:WP_014613426.1;Name=WP_014613426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166418.1;locus_tag=CYJ00_RS13375;product=SE1626 family protein;protein_id=WP_014613426.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	5971	6846	.	+	.	ID=gene-CYJ00_RS11765;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=CYJ00_RS11765;old_locus_tag=CYJ00_011770
NZ_PJUS02000401.1	Protein Homology	CDS	5971	6846	.	+	0	ID=cds-WP_014613427.1;Parent=gene-CYJ00_RS11765;Dbxref=GenBank:WP_014613427.1;Name=WP_014613427.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166419.1;locus_tag=CYJ00_RS11765;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_014613427.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	6843	7571	.	+	.	ID=gene-CYJ00_RS11770;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=CYJ00_RS11770;old_locus_tag=CYJ00_011775
NZ_PJUS02000401.1	Protein Homology	CDS	6843	7571	.	+	0	ID=cds-WP_020219902.1;Parent=gene-CYJ00_RS11770;Dbxref=GenBank:WP_020219902.1;Name=WP_020219902.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613428.1;locus_tag=CYJ00_RS11770;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_020219902.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	7989	8666	.	+	.	ID=gene-CYJ00_RS11775;Name=CYJ00_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11775;old_locus_tag=CYJ00_011780
NZ_PJUS02000401.1	Protein Homology	CDS	7989	8666	.	+	0	ID=cds-WP_014613429.1;Parent=gene-CYJ00_RS11775;Dbxref=GenBank:WP_014613429.1;Name=WP_014613429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=CYJ00_RS11775;product=GntR family transcriptional regulator;protein_id=WP_014613429.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	8690	10240	.	+	.	ID=gene-CYJ00_RS11780;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CYJ00_RS11780;old_locus_tag=CYJ00_011785
NZ_PJUS02000401.1	Protein Homology	CDS	8690	10240	.	+	0	ID=cds-WP_014613430.1;Parent=gene-CYJ00_RS11780;Dbxref=GenBank:WP_014613430.1;Name=WP_014613430.1;Ontology_term=GO:0009255,GO:0019521,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166422.1;locus_tag=CYJ00_RS11780;product=gluconokinase;protein_id=WP_014613430.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	10251	11612	.	+	.	ID=gene-CYJ00_RS11785;Name=CYJ00_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11785;old_locus_tag=CYJ00_011790
NZ_PJUS02000401.1	Protein Homology	CDS	10251	11612	.	+	0	ID=cds-WP_014613431.1;Parent=gene-CYJ00_RS11785;Dbxref=GenBank:WP_014613431.1;Name=WP_014613431.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=CYJ00_RS11785;product=gluconate:H+ symporter;protein_id=WP_014613431.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	11700	12257	.	-	.	ID=gene-CYJ00_RS11790;Name=CYJ00_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11790;old_locus_tag=CYJ00_011795
NZ_PJUS02000401.1	Protein Homology	CDS	11700	12257	.	-	0	ID=cds-WP_037542611.1;Parent=gene-CYJ00_RS11790;Dbxref=GenBank:WP_037542611.1;Name=WP_037542611.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166424.1;locus_tag=CYJ00_RS11790;product=thioredoxin family protein;protein_id=WP_037542611.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	12437	13000	.	+	.	ID=gene-CYJ00_RS11795;Name=CYJ00_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11795;old_locus_tag=CYJ00_011800
NZ_PJUS02000401.1	Protein Homology	CDS	12437	13000	.	+	0	ID=cds-WP_101457725.1;Parent=gene-CYJ00_RS11795;Dbxref=GenBank:WP_101457725.1;Name=WP_101457725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=CYJ00_RS11795;product=HAAS signaling domain-containing protein;protein_id=WP_101457725.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	12997	13839	.	+	.	ID=gene-CYJ00_RS11800;Name=CYJ00_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11800;old_locus_tag=CYJ00_011805
NZ_PJUS02000401.1	Protein Homology	CDS	12997	13839	.	+	0	ID=cds-WP_101457726.1;Parent=gene-CYJ00_RS11800;Dbxref=GenBank:WP_101457726.1;Name=WP_101457726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169323.1;locus_tag=CYJ00_RS11800;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_101457726.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	13940	14983	.	-	.	ID=gene-CYJ00_RS11805;Name=CYJ00_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11805;old_locus_tag=CYJ00_011810
NZ_PJUS02000401.1	Protein Homology	CDS	13940	14983	.	-	0	ID=cds-WP_101457727.1;Parent=gene-CYJ00_RS11805;Dbxref=GenBank:WP_101457727.1;Name=WP_101457727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613435.1;locus_tag=CYJ00_RS11805;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_101457727.1;transl_table=11
NZ_PJUS02000401.1	RefSeq	gene	15696	16085	.	-	.	ID=gene-CYJ00_RS11810;Name=CYJ00_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11810;old_locus_tag=CYJ00_011815
NZ_PJUS02000401.1	Protein Homology	CDS	15696	16085	.	-	0	ID=cds-WP_014613436.1;Parent=gene-CYJ00_RS11810;Dbxref=GenBank:WP_014613436.1;Name=WP_014613436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=CYJ00_RS11810;product=hypothetical protein;protein_id=WP_014613436.1;transl_table=11
##sequence-region NZ_PJUS02000298.1 1 334
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000298.1	RefSeq	region	1	334	.	+	.	ID=NZ_PJUS02000298.1:1..334;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000298.1	RefSeq	gene	187	334	.	+	.	ID=gene-CYJ00_RS13615;Name=CYJ00_RS13615;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13615;partial=true
NZ_PJUS02000298.1	Protein Homology	CDS	187	334	.	+	0	ID=cds-WP_241956947.1;Parent=gene-CYJ00_RS13615;Dbxref=GenBank:WP_241956947.1;Name=WP_241956947.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=334,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.7;locus_tag=CYJ00_RS13615;partial=true;product=IS110 family transposase;protein_id=WP_241956947.1;transl_table=11
##sequence-region NZ_PJUS02000304.1 1 16016
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000304.1	RefSeq	region	1	16016	.	+	.	ID=NZ_PJUS02000304.1:1..16016;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000304.1	RefSeq	gene	21	563	.	+	.	ID=gene-CYJ00_RS08150;Name=CYJ00_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08150;old_locus_tag=CYJ00_008155
NZ_PJUS02000304.1	Protein Homology	CDS	21	563	.	+	0	ID=cds-WP_014613471.1;Parent=gene-CYJ00_RS08150;Dbxref=GenBank:WP_014613471.1;Name=WP_014613471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613471.1;locus_tag=CYJ00_RS08150;product=metalloprotease family protein;protein_id=WP_014613471.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	668	1738	.	+	.	ID=gene-CYJ00_RS08155;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08155;old_locus_tag=CYJ00_008160
NZ_PJUS02000304.1	Protein Homology	CDS	668	1738	.	+	0	ID=cds-WP_014613472.1;Parent=gene-CYJ00_RS08155;Dbxref=GenBank:WP_014613472.1;Name=WP_014613472.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=CYJ00_RS08155;product=DNA polymerase IV;protein_id=WP_014613472.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	1733	2293	.	-	.	ID=gene-CYJ00_RS08160;Name=CYJ00_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08160;old_locus_tag=CYJ00_008165
NZ_PJUS02000304.1	Protein Homology	CDS	1733	2293	.	-	0	ID=cds-WP_014613473.1;Parent=gene-CYJ00_RS08160;Dbxref=GenBank:WP_014613473.1;Name=WP_014613473.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=CYJ00_RS08160;product=3'-5' exonuclease;protein_id=WP_014613473.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	2582	3085	.	-	.	ID=gene-CYJ00_RS08165;Name=CYJ00_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08165;old_locus_tag=CYJ00_008170
NZ_PJUS02000304.1	Protein Homology	CDS	2582	3085	.	-	0	ID=cds-WP_014613474.1;Parent=gene-CYJ00_RS08165;Dbxref=GenBank:WP_014613474.1;Name=WP_014613474.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613474.1;locus_tag=CYJ00_RS08165;product=ferritin;protein_id=WP_014613474.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	3282	4592	.	+	.	ID=gene-CYJ00_RS08170;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=CYJ00_RS08170;old_locus_tag=CYJ00_008175
NZ_PJUS02000304.1	Protein Homology	CDS	3282	4592	.	+	0	ID=cds-WP_014613475.1;Parent=gene-CYJ00_RS08170;Dbxref=GenBank:WP_014613475.1;Name=WP_014613475.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166457.1;locus_tag=CYJ00_RS08170;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_014613475.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	4594	5316	.	+	.	ID=gene-CYJ00_RS08175;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CYJ00_RS08175;old_locus_tag=CYJ00_008180
NZ_PJUS02000304.1	Protein Homology	CDS	4594	5316	.	+	0	ID=cds-WP_014613476.1;Parent=gene-CYJ00_RS08175;Dbxref=GenBank:WP_014613476.1;Name=WP_014613476.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613476.1;locus_tag=CYJ00_RS08175;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_014613476.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	6283	7281	.	-	.	ID=gene-CYJ00_RS08180;Name=CYJ00_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08180;old_locus_tag=CYJ00_008185
NZ_PJUS02000304.1	Protein Homology	CDS	6283	7281	.	-	0	ID=cds-WP_014613477.1;Parent=gene-CYJ00_RS08180;Dbxref=GenBank:WP_014613477.1;Name=WP_014613477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169359.1;locus_tag=CYJ00_RS08180;product=FUSC family protein;protein_id=WP_014613477.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	7378	8139	.	+	.	ID=gene-CYJ00_RS08185;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CYJ00_RS08185;old_locus_tag=CYJ00_008190
NZ_PJUS02000304.1	Protein Homology	CDS	7378	8139	.	+	0	ID=cds-WP_014613478.1;Parent=gene-CYJ00_RS08185;Dbxref=GenBank:WP_014613478.1;Name=WP_014613478.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169360.1;locus_tag=CYJ00_RS08185;product=type I methionyl aminopeptidase;protein_id=WP_014613478.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	8237	8626	.	+	.	ID=gene-CYJ00_RS08190;Name=CYJ00_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08190;old_locus_tag=CYJ00_008195
NZ_PJUS02000304.1	Protein Homology	CDS	8237	8626	.	+	0	ID=cds-WP_014613479.1;Parent=gene-CYJ00_RS08190;Dbxref=GenBank:WP_014613479.1;Name=WP_014613479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613479.1;locus_tag=CYJ00_RS08190;product=hypothetical protein;protein_id=WP_014613479.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	8639	9340	.	+	.	ID=gene-CYJ00_RS08195;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=CYJ00_RS08195;old_locus_tag=CYJ00_008200
NZ_PJUS02000304.1	Protein Homology	CDS	8639	9340	.	+	0	ID=cds-WP_014613480.1;Parent=gene-CYJ00_RS08195;Dbxref=GenBank:WP_014613480.1;Name=WP_014613480.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=CYJ00_RS08195;product=cell wall-active antibiotics response protein VraT;protein_id=WP_014613480.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	9337	10380	.	+	.	ID=gene-CYJ00_RS08200;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08200;old_locus_tag=CYJ00_008205
NZ_PJUS02000304.1	Protein Homology	CDS	9337	10380	.	+	0	ID=cds-WP_014613481.1;Parent=gene-CYJ00_RS08200;Dbxref=GenBank:WP_014613481.1;Name=WP_014613481.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=CYJ00_RS08200;product=sensor histidine kinase VraS;protein_id=WP_014613481.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	10370	10999	.	+	.	ID=gene-CYJ00_RS08205;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=CYJ00_RS08205;old_locus_tag=CYJ00_008210
NZ_PJUS02000304.1	Protein Homology	CDS	10370	10999	.	+	0	ID=cds-WP_014613482.1;Parent=gene-CYJ00_RS08205;Dbxref=GenBank:WP_014613482.1;Name=WP_014613482.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=CYJ00_RS08205;product=response regulator transcription factor VraR;protein_id=WP_014613482.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	11566	12147	.	-	.	ID=gene-CYJ00_RS08210;Name=CYJ00_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08210;old_locus_tag=CYJ00_008215
NZ_PJUS02000304.1	Protein Homology	CDS	11566	12147	.	-	0	ID=cds-WP_015729388.1;Parent=gene-CYJ00_RS08210;Dbxref=GenBank:WP_015729388.1;Name=WP_015729388.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729388.1;locus_tag=CYJ00_RS08210;product=beta-class carbonic anhydrase;protein_id=WP_015729388.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	12180	13517	.	-	.	ID=gene-CYJ00_RS08215;Name=CYJ00_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08215;old_locus_tag=CYJ00_008220
NZ_PJUS02000304.1	Protein Homology	CDS	12180	13517	.	-	0	ID=cds-WP_014613484.1;Parent=gene-CYJ00_RS08215;Dbxref=GenBank:WP_014613484.1;Name=WP_014613484.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729387.1;locus_tag=CYJ00_RS08215;product=YihY/virulence factor BrkB family protein;protein_id=WP_014613484.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	13733	14020	.	-	.	ID=gene-CYJ00_RS08220;Name=CYJ00_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08220;old_locus_tag=CYJ00_008225
NZ_PJUS02000304.1	Protein Homology	CDS	13733	14020	.	-	0	ID=cds-WP_014613485.1;Parent=gene-CYJ00_RS08220;Dbxref=GenBank:WP_014613485.1;Name=WP_014613485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169367.1;locus_tag=CYJ00_RS08220;product=YtxH domain-containing protein;protein_id=WP_014613485.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	14028	14486	.	-	.	ID=gene-CYJ00_RS08225;Name=CYJ00_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08225;old_locus_tag=CYJ00_008230
NZ_PJUS02000304.1	Protein Homology	CDS	14028	14486	.	-	0	ID=cds-WP_014613486.1;Parent=gene-CYJ00_RS08225;Dbxref=GenBank:WP_014613486.1;Name=WP_014613486.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=CYJ00_RS08225;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_014613486.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	14620	14823	.	+	.	ID=gene-CYJ00_RS08230;Name=CYJ00_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08230;old_locus_tag=CYJ00_008235
NZ_PJUS02000304.1	Protein Homology	CDS	14620	14823	.	+	0	ID=cds-WP_014613487.1;Parent=gene-CYJ00_RS08230;Dbxref=GenBank:WP_014613487.1;Name=WP_014613487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482850.1;locus_tag=CYJ00_RS08230;product=DUF1128 family protein;protein_id=WP_014613487.1;transl_table=11
NZ_PJUS02000304.1	RefSeq	gene	14845	16016	.	+	.	ID=gene-CYJ00_RS08235;Name=CYJ00_RS08235;end_range=16016,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08235;old_locus_tag=CYJ00_008240;partial=true
NZ_PJUS02000304.1	Protein Homology	CDS	14845	16016	.	+	0	ID=cds-WP_101457728.1;Parent=gene-CYJ00_RS08235;Dbxref=GenBank:WP_101457728.1;Name=WP_101457728.1;end_range=16016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729386.1;locus_tag=CYJ00_RS08235;partial=true;product=aminopeptidase;protein_id=WP_101457728.1;transl_table=11
##sequence-region NZ_PJUS02000137.1 1 335
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000137.1	RefSeq	region	1	335	.	+	.	ID=NZ_PJUS02000137.1:1..335;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000137.1	RefSeq	gene	1	335	.	+	.	ID=gene-CYJ00_RS13100;Name=CYJ00_RS13100;end_range=335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13100;old_locus_tag=CYJ00_003755;partial=true;start_range=.,1
NZ_PJUS02000137.1	Protein Homology	CDS	1	335	.	+	0	ID=cds-WP_157938999.1;Parent=gene-CYJ00_RS13100;Dbxref=GenBank:WP_157938999.1;Name=WP_157938999.1;end_range=335,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038186.1;locus_tag=CYJ00_RS13100;partial=true;product=YPDG domain-containing protein;protein_id=WP_157938999.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000011.1 1 462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000011.1	RefSeq	region	1	462	.	+	.	ID=NZ_PJUS02000011.1:1..462;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000011.1	RefSeq	gene	1	442	.	+	.	ID=gene-CYJ00_RS00375;Name=CYJ00_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00375;old_locus_tag=CYJ00_000375;partial=true;start_range=.,1
NZ_PJUS02000011.1	Protein Homology	CDS	1	442	.	+	1	ID=cds-WP_490327961.1;Parent=gene-CYJ00_RS00375;Dbxref=GenBank:WP_490327961.1;Name=WP_490327961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=CYJ00_RS00375;partial=true;product=PI-PLC domain-containing protein;protein_id=WP_490327961.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000217.1 1 17103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000217.1	RefSeq	region	1	17103	.	+	.	ID=NZ_PJUS02000217.1:1..17103;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000217.1	RefSeq	gene	121	1074	.	+	.	ID=gene-CYJ00_RS06025;Name=CYJ00_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06025;old_locus_tag=CYJ00_006030
NZ_PJUS02000217.1	Protein Homology	CDS	121	1074	.	+	0	ID=cds-WP_063284348.1;Parent=gene-CYJ00_RS06025;Dbxref=GenBank:WP_063284348.1;Name=WP_063284348.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=CYJ00_RS06025;product=alpha/beta hydrolase;protein_id=WP_063284348.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	1061	2017	.	+	.	ID=gene-CYJ00_RS06030;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06030;old_locus_tag=CYJ00_006035
NZ_PJUS02000217.1	Protein Homology	CDS	1061	2017	.	+	0	ID=cds-WP_014614027.1;Parent=gene-CYJ00_RS06030;Dbxref=GenBank:WP_014614027.1;Name=WP_014614027.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167781.1;locus_tag=CYJ00_RS06030;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_014614027.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	2010	2216	.	+	.	ID=gene-CYJ00_RS06035;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CYJ00_RS06035;old_locus_tag=CYJ00_006040
NZ_PJUS02000217.1	Protein Homology	CDS	2010	2216	.	+	0	ID=cds-WP_014614028.1;Parent=gene-CYJ00_RS06035;Dbxref=GenBank:WP_014614028.1;Name=WP_014614028.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=CYJ00_RS06035;product=RNA chaperone Hfq;protein_id=WP_014614028.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	2509	4179	.	-	.	ID=gene-CYJ00_RS06040;Name=CYJ00_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06040;old_locus_tag=CYJ00_006045
NZ_PJUS02000217.1	Protein Homology	CDS	2509	4179	.	-	0	ID=cds-WP_015729065.1;Parent=gene-CYJ00_RS06040;Dbxref=GenBank:WP_015729065.1;Name=WP_015729065.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614029.1;locus_tag=CYJ00_RS06040;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_015729065.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	4306	5808	.	-	.	ID=gene-CYJ00_RS06045;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CYJ00_RS06045;old_locus_tag=CYJ00_006050
NZ_PJUS02000217.1	Protein Homology	CDS	4306	5808	.	-	0	ID=cds-WP_014614030.1;Parent=gene-CYJ00_RS06045;Dbxref=GenBank:WP_014614030.1;Name=WP_014614030.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165429.1;locus_tag=CYJ00_RS06045;product=glycerol kinase GlpK;protein_id=WP_014614030.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	6104	6919	.	-	.	ID=gene-CYJ00_RS06050;Name=CYJ00_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06050;old_locus_tag=CYJ00_006055
NZ_PJUS02000217.1	Protein Homology	CDS	6104	6919	.	-	0	ID=cds-WP_014614031.1;Parent=gene-CYJ00_RS06050;Dbxref=GenBank:WP_014614031.1;Name=WP_014614031.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=CYJ00_RS06050;product=MIP/aquaporin family protein;protein_id=WP_014614031.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	7158	8186	.	-	.	ID=gene-CYJ00_RS06055;Name=CYJ00_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06055;old_locus_tag=CYJ00_006060
NZ_PJUS02000217.1	Protein Homology	CDS	7158	8186	.	-	0	ID=cds-WP_063284346.1;Parent=gene-CYJ00_RS06055;Dbxref=GenBank:WP_063284346.1;Name=WP_063284346.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729064.1;locus_tag=CYJ00_RS06055;product=S66 family peptidase;protein_id=WP_063284346.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	8214	8747	.	-	.	ID=gene-CYJ00_RS06060;Name=CYJ00_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06060;old_locus_tag=CYJ00_006065
NZ_PJUS02000217.1	Protein Homology	CDS	8214	8747	.	-	0	ID=cds-WP_063279110.1;Parent=gene-CYJ00_RS06060;Dbxref=GenBank:WP_063279110.1;Name=WP_063279110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165432.1;locus_tag=CYJ00_RS06060;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_063279110.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	8759	10699	.	-	.	ID=gene-CYJ00_RS06065;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CYJ00_RS06065;old_locus_tag=CYJ00_006070
NZ_PJUS02000217.1	Protein Homology	CDS	8759	10699	.	-	0	ID=cds-WP_100040094.1;Parent=gene-CYJ00_RS06065;Dbxref=GenBank:WP_100040094.1;Name=WP_100040094.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729062.1;locus_tag=CYJ00_RS06065;product=DNA mismatch repair endonuclease MutL;protein_id=WP_100040094.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	10714	13311	.	-	.	ID=gene-CYJ00_RS06070;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CYJ00_RS06070;old_locus_tag=CYJ00_006075
NZ_PJUS02000217.1	Protein Homology	CDS	10714	13311	.	-	0	ID=cds-WP_014614035.1;Parent=gene-CYJ00_RS06070;Dbxref=GenBank:WP_014614035.1;Name=WP_014614035.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=CYJ00_RS06070;product=DNA mismatch repair protein MutS;protein_id=WP_014614035.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	13967	14476	.	-	.	ID=gene-CYJ00_RS06075;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CYJ00_RS06075;old_locus_tag=CYJ00_006080
NZ_PJUS02000217.1	Protein Homology	CDS	13967	14476	.	-	0	ID=cds-WP_014614036.1;Parent=gene-CYJ00_RS06075;Dbxref=GenBank:WP_014614036.1;Name=WP_014614036.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614036.1;locus_tag=CYJ00_RS06075;product=energy coupling factor transporter S component ThiW;protein_id=WP_014614036.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	14531	14908	.	-	.	ID=gene-CYJ00_RS06080;Name=CYJ00_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06080;old_locus_tag=CYJ00_006085
NZ_PJUS02000217.1	Protein Homology	CDS	14531	14908	.	-	0	ID=cds-WP_014614037.1;Parent=gene-CYJ00_RS06080;Dbxref=GenBank:WP_014614037.1;Name=WP_014614037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=CYJ00_RS06080;product=YlbF family regulator;protein_id=WP_014614037.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	14909	16459	.	-	.	ID=gene-CYJ00_RS06085;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06085;old_locus_tag=CYJ00_006090
NZ_PJUS02000217.1	Protein Homology	CDS	14909	16459	.	-	0	ID=cds-WP_014614038.1;Parent=gene-CYJ00_RS06085;Dbxref=GenBank:WP_014614038.1;Name=WP_014614038.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=CYJ00_RS06085;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_014614038.1;transl_table=11
NZ_PJUS02000217.1	RefSeq	gene	16563	16862	.	-	.	ID=gene-CYJ00_RS06090;Name=CYJ00_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06090;old_locus_tag=CYJ00_006095
NZ_PJUS02000217.1	Protein Homology	CDS	16563	16862	.	-	0	ID=cds-WP_014614039.1;Parent=gene-CYJ00_RS06090;Dbxref=GenBank:WP_014614039.1;Name=WP_014614039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729060.1;locus_tag=CYJ00_RS06090;product=thiamine-binding protein;protein_id=WP_014614039.1;transl_table=11
##sequence-region NZ_PJUS02000207.1 1 280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000207.1	RefSeq	region	1	280	.	+	.	ID=NZ_PJUS02000207.1:1..280;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000207.1	RefSeq	gene	86	280	.	+	.	ID=gene-CYJ00_RS13240;Name=CYJ00_RS13240;end_range=280,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ00_RS13240;partial=true
NZ_PJUS02000207.1	cmsearch	rRNA	86	280	.	+	.	ID=rna-CYJ00_RS13240;Parent=gene-CYJ00_RS13240;Dbxref=RFAM:RF02541;end_range=280,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS13240;partial=true;product=23S ribosomal RNA
NZ_PJUS02000207.1	cmsearch	exon	86	280	.	+	.	ID=exon-CYJ00_RS13240-1;Parent=rna-CYJ00_RS13240;Dbxref=RFAM:RF02541;end_range=280,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS13240;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PJUS02000097.1 1 12668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000097.1	RefSeq	region	1	12668	.	+	.	ID=NZ_PJUS02000097.1:1..12668;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000097.1	RefSeq	gene	8	178	.	+	.	ID=gene-CYJ00_RS14065;Name=CYJ00_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14065;old_locus_tag=CYJ00_002595
NZ_PJUS02000097.1	Protein Homology	CDS	8	178	.	+	0	ID=cds-WP_310465711.1;Parent=gene-CYJ00_RS14065;Dbxref=GenBank:WP_310465711.1;Name=WP_310465711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=CYJ00_RS14065;product=hypothetical protein;protein_id=WP_310465711.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	308	1351	.	-	.	ID=gene-CYJ00_RS02600;Name=CYJ00_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02600;old_locus_tag=CYJ00_002600
NZ_PJUS02000097.1	Protein Homology	CDS	308	1351	.	-	0	ID=cds-WP_014612773.1;Parent=gene-CYJ00_RS02600;Dbxref=GenBank:WP_014612773.1;Name=WP_014612773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166823.1;locus_tag=CYJ00_RS02600;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014612773.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	1743	2501	.	+	.	ID=gene-CYJ00_RS02605;Name=CYJ00_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02605;old_locus_tag=CYJ00_002605
NZ_PJUS02000097.1	Protein Homology	CDS	1743	2501	.	+	0	ID=cds-WP_101457729.1;Parent=gene-CYJ00_RS02605;Dbxref=GenBank:WP_101457729.1;Name=WP_101457729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729770.1;locus_tag=CYJ00_RS02605;product=spr1630 family ClpXP-sensitive toxin;protein_id=WP_101457729.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	2523	3710	.	+	.	ID=gene-CYJ00_RS02610;Name=CYJ00_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02610;old_locus_tag=CYJ00_002610
NZ_PJUS02000097.1	Protein Homology	CDS	2523	3710	.	+	0	ID=cds-WP_101457730.1;Parent=gene-CYJ00_RS02610;Dbxref=GenBank:WP_101457730.1;Name=WP_101457730.1;Ontology_term=GO:0001217;gbkey=CDS;go_function=DNA-binding transcription repressor activity|0001217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612775.1;locus_tag=CYJ00_RS02610;product=spr1629 family repressor/antitoxin;protein_id=WP_101457730.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	3805	5409	.	-	.	ID=gene-CYJ00_RS02615;Name=CYJ00_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02615;old_locus_tag=CYJ00_002615
NZ_PJUS02000097.1	Protein Homology	CDS	3805	5409	.	-	0	ID=cds-WP_099991782.1;Parent=gene-CYJ00_RS02615;Dbxref=GenBank:WP_099991782.1;Name=WP_099991782.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612776.1;locus_tag=CYJ00_RS02615;product=L-lactate permease;protein_id=WP_099991782.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	5877	6554	.	+	.	ID=gene-CYJ00_RS02620;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CYJ00_RS02620;old_locus_tag=CYJ00_002620
NZ_PJUS02000097.1	Protein Homology	CDS	5877	6554	.	+	0	ID=cds-WP_014612777.1;Parent=gene-CYJ00_RS02620;Dbxref=GenBank:WP_014612777.1;Name=WP_014612777.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=CYJ00_RS02620;product=dethiobiotin synthase;protein_id=WP_014612777.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	6544	7896	.	+	.	ID=gene-CYJ00_RS02625;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CYJ00_RS02625;old_locus_tag=CYJ00_002625
NZ_PJUS02000097.1	Protein Homology	CDS	6544	7896	.	+	0	ID=cds-WP_101457731.1;Parent=gene-CYJ00_RS02625;Dbxref=GenBank:WP_101457731.1;Name=WP_101457731.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=CYJ00_RS02625;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_101457731.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	7899	9020	.	+	.	ID=gene-CYJ00_RS02630;Name=CYJ00_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02630;old_locus_tag=CYJ00_002630
NZ_PJUS02000097.1	Protein Homology	CDS	7899	9020	.	+	0	ID=cds-WP_101457732.1;Parent=gene-CYJ00_RS02630;Dbxref=GenBank:WP_101457732.1;Name=WP_101457732.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729765.1;locus_tag=CYJ00_RS02630;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101457732.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	9023	9712	.	+	.	ID=gene-CYJ00_RS02635;Name=CYJ00_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02635;old_locus_tag=CYJ00_002635
NZ_PJUS02000097.1	Protein Homology	CDS	9023	9712	.	+	0	ID=cds-WP_101457733.1;Parent=gene-CYJ00_RS02635;Dbxref=GenBank:WP_101457733.1;Name=WP_101457733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612780.1;locus_tag=CYJ00_RS02635;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_101457733.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	9983	11017	.	+	.	ID=gene-CYJ00_RS02640;Name=CYJ00_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02640;old_locus_tag=CYJ00_002640
NZ_PJUS02000097.1	Protein Homology	CDS	9983	11017	.	+	0	ID=cds-WP_015729763.1;Parent=gene-CYJ00_RS02640;Dbxref=GenBank:WP_015729763.1;Name=WP_015729763.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166830.1;locus_tag=CYJ00_RS02640;product=family 20 glycosylhydrolase;protein_id=WP_015729763.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	11014	12072	.	-	.	ID=gene-CYJ00_RS02645;Name=icaC;gbkey=Gene;gene=icaC;gene_biotype=protein_coding;locus_tag=CYJ00_RS02645;old_locus_tag=CYJ00_002645
NZ_PJUS02000097.1	Protein Homology	CDS	11014	12072	.	-	0	ID=cds-WP_014612782.1;Parent=gene-CYJ00_RS02645;Dbxref=GenBank:WP_014612782.1;Name=WP_014612782.1;gbkey=CDS;gene=icaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612782.1;locus_tag=CYJ00_RS02645;product=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;protein_id=WP_014612782.1;transl_table=11
NZ_PJUS02000097.1	RefSeq	gene	12059	12668	.	-	.	ID=gene-CYJ00_RS02650;Name=icaB;end_range=12668,.;gbkey=Gene;gene=icaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02650;old_locus_tag=CYJ00_002650;partial=true
NZ_PJUS02000097.1	Protein Homology	CDS	12059	12668	.	-	1	ID=cds-WP_101457734.1;Parent=gene-CYJ00_RS02650;Dbxref=GenBank:WP_101457734.1;Name=WP_101457734.1;Ontology_term=GO:0000271,GO:0019213;end_range=12668,.;gbkey=CDS;gene=icaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612783.1;locus_tag=CYJ00_RS02650;partial=true;product=intercellular adhesin biosynthesis polysaccharide N-deacetylase;protein_id=WP_101457734.1;transl_table=11
##sequence-region NZ_PJUS02000418.1 1 478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000418.1	RefSeq	region	1	478	.	+	.	ID=NZ_PJUS02000418.1:1..478;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000418.1	RefSeq	gene	79	154	.	-	.	ID=gene-CYJ00_RS12445;Name=CYJ00_RS12445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12445;old_locus_tag=CYJ00_012450
NZ_PJUS02000418.1	tRNAscan-SE	tRNA	79	154	.	-	.	ID=rna-CYJ00_RS12445;Parent=gene-CYJ00_RS12445;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12445;product=tRNA-Ala
NZ_PJUS02000418.1	tRNAscan-SE	exon	79	154	.	-	.	ID=exon-CYJ00_RS12445-1;Parent=rna-CYJ00_RS12445;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12445;product=tRNA-Ala
NZ_PJUS02000418.1	RefSeq	gene	177	250	.	-	.	ID=gene-CYJ00_RS12450;Name=CYJ00_RS12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12450;old_locus_tag=CYJ00_012455
NZ_PJUS02000418.1	tRNAscan-SE	tRNA	177	250	.	-	.	ID=rna-CYJ00_RS12450;Parent=gene-CYJ00_RS12450;anticodon=(pos:complement(214..216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12450;product=tRNA-Pro
NZ_PJUS02000418.1	tRNAscan-SE	exon	177	250	.	-	.	ID=exon-CYJ00_RS12450-1;Parent=rna-CYJ00_RS12450;anticodon=(pos:complement(214..216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12450;product=tRNA-Pro
NZ_PJUS02000418.1	RefSeq	gene	264	337	.	-	.	ID=gene-CYJ00_RS12455;Name=CYJ00_RS12455;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12455;old_locus_tag=CYJ00_012460
NZ_PJUS02000418.1	tRNAscan-SE	tRNA	264	337	.	-	.	ID=rna-CYJ00_RS12455;Parent=gene-CYJ00_RS12455;anticodon=(pos:complement(301..303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12455;product=tRNA-Arg
NZ_PJUS02000418.1	tRNAscan-SE	exon	264	337	.	-	.	ID=exon-CYJ00_RS12455-1;Parent=rna-CYJ00_RS12455;anticodon=(pos:complement(301..303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12455;product=tRNA-Arg
NZ_PJUS02000418.1	RefSeq	gene	355	443	.	-	.	ID=gene-CYJ00_RS12460;Name=CYJ00_RS12460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12460;old_locus_tag=CYJ00_012465
NZ_PJUS02000418.1	tRNAscan-SE	tRNA	355	443	.	-	.	ID=rna-CYJ00_RS12460;Parent=gene-CYJ00_RS12460;anticodon=(pos:complement(407..409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12460;product=tRNA-Leu
NZ_PJUS02000418.1	tRNAscan-SE	exon	355	443	.	-	.	ID=exon-CYJ00_RS12460-1;Parent=rna-CYJ00_RS12460;anticodon=(pos:complement(407..409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12460;product=tRNA-Leu
##sequence-region NZ_PJUS02000410.1 1 434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000410.1	RefSeq	region	1	434	.	+	.	ID=NZ_PJUS02000410.1:1..434;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000410.1	RefSeq	gene	86	157	.	+	.	ID=gene-CYJ00_RS12040;Name=CYJ00_RS12040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12040;old_locus_tag=CYJ00_012045
NZ_PJUS02000410.1	tRNAscan-SE	tRNA	86	157	.	+	.	ID=rna-CYJ00_RS12040;Parent=gene-CYJ00_RS12040;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12040;product=tRNA-Glu
NZ_PJUS02000410.1	tRNAscan-SE	exon	86	157	.	+	.	ID=exon-CYJ00_RS12040-1;Parent=rna-CYJ00_RS12040;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12040;product=tRNA-Glu
NZ_PJUS02000410.1	RefSeq	gene	207	295	.	+	.	ID=gene-CYJ00_RS12045;Name=CYJ00_RS12045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12045;old_locus_tag=CYJ00_012050
NZ_PJUS02000410.1	tRNAscan-SE	tRNA	207	295	.	+	.	ID=rna-CYJ00_RS12045;Parent=gene-CYJ00_RS12045;anticodon=(pos:242..244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12045;product=tRNA-Ser
NZ_PJUS02000410.1	tRNAscan-SE	exon	207	295	.	+	.	ID=exon-CYJ00_RS12045-1;Parent=rna-CYJ00_RS12045;anticodon=(pos:242..244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12045;product=tRNA-Ser
##sequence-region NZ_PJUS02000396.1 1 11712
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000396.1	RefSeq	region	1	11712	.	+	.	ID=NZ_PJUS02000396.1:1..11712;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000396.1	RefSeq	gene	147	971	.	-	.	ID=gene-CYJ00_RS11600;Name=CYJ00_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11600;old_locus_tag=CYJ00_011605
NZ_PJUS02000396.1	Protein Homology	CDS	147	971	.	-	0	ID=cds-WP_014613039.1;Parent=gene-CYJ00_RS11600;Dbxref=GenBank:WP_014613039.1;Name=WP_014613039.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613039.1;locus_tag=CYJ00_RS11600;product=formate/nitrite transporter family protein;protein_id=WP_014613039.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	1187	2719	.	-	.	ID=gene-CYJ00_RS11605;Name=CYJ00_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11605;old_locus_tag=CYJ00_011610
NZ_PJUS02000396.1	Protein Homology	CDS	1187	2719	.	-	0	ID=cds-WP_014613038.1;Parent=gene-CYJ00_RS11605;Dbxref=GenBank:WP_014613038.1;Name=WP_014613038.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729606.1;locus_tag=CYJ00_RS11605;product=SLC13 family permease;protein_id=WP_014613038.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	2817	3824	.	-	.	ID=gene-CYJ00_RS11610;Name=CYJ00_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11610;old_locus_tag=CYJ00_011615
NZ_PJUS02000396.1	Protein Homology	CDS	2817	3824	.	-	0	ID=cds-WP_101457735.1;Parent=gene-CYJ00_RS11610;Dbxref=GenBank:WP_101457735.1;Name=WP_101457735.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729607.1;locus_tag=CYJ00_RS11610;product=PTS sugar transporter subunit IIC;protein_id=WP_101457735.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	4601	5290	.	-	.	ID=gene-CYJ00_RS11615;Name=CYJ00_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11615;old_locus_tag=CYJ00_011620
NZ_PJUS02000396.1	Protein Homology	CDS	4601	5290	.	-	0	ID=cds-WP_014612930.1;Parent=gene-CYJ00_RS11615;Dbxref=GenBank:WP_014612930.1;Name=WP_014612930.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729659.1;locus_tag=CYJ00_RS11615;product=ATP-binding cassette domain-containing protein;protein_id=WP_014612930.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	5283	6059	.	-	.	ID=gene-CYJ00_RS11620;Name=CYJ00_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11620;old_locus_tag=CYJ00_011625
NZ_PJUS02000396.1	Protein Homology	CDS	5283	6059	.	-	0	ID=cds-WP_101457736.1;Parent=gene-CYJ00_RS11620;Dbxref=GenBank:WP_101457736.1;Name=WP_101457736.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=CYJ00_RS11620;product=ATP-binding cassette domain-containing protein;protein_id=WP_101457736.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	6052	6876	.	-	.	ID=gene-CYJ00_RS11625;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=CYJ00_RS11625;old_locus_tag=CYJ00_011630
NZ_PJUS02000396.1	Protein Homology	CDS	6052	6876	.	-	0	ID=cds-WP_101457737.1;Parent=gene-CYJ00_RS11625;Dbxref=GenBank:WP_101457737.1;Name=WP_101457737.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729661.1;locus_tag=CYJ00_RS11625;product=nickel transporter permease;protein_id=WP_101457737.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	6873	7859	.	-	.	ID=gene-CYJ00_RS11630;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CYJ00_RS11630;old_locus_tag=CYJ00_011635
NZ_PJUS02000396.1	Protein Homology	CDS	6873	7859	.	-	0	ID=cds-WP_014612927.1;Parent=gene-CYJ00_RS11630;Dbxref=GenBank:WP_014612927.1;Name=WP_014612927.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167506.1;locus_tag=CYJ00_RS11630;product=nickel ABC transporter permease;protein_id=WP_014612927.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	7849	9345	.	-	.	ID=gene-CYJ00_RS11635;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CYJ00_RS11635;old_locus_tag=CYJ00_011640
NZ_PJUS02000396.1	Protein Homology	CDS	7849	9345	.	-	0	ID=cds-WP_101457738.1;Parent=gene-CYJ00_RS11635;Dbxref=GenBank:WP_101457738.1;Name=WP_101457738.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=CYJ00_RS11635;product=nickel ABC transporter substrate-binding protein;protein_id=WP_101457738.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	9449	10177	.	-	.	ID=gene-CYJ00_RS11640;Name=CYJ00_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11640;old_locus_tag=CYJ00_011645
NZ_PJUS02000396.1	Protein Homology	CDS	9449	10177	.	-	0	ID=cds-WP_014612925.1;Parent=gene-CYJ00_RS11640;Dbxref=GenBank:WP_014612925.1;Name=WP_014612925.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612925.1;locus_tag=CYJ00_RS11640;product=epoxyqueuosine reductase QueH;protein_id=WP_014612925.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	10364	10993	.	-	.	ID=gene-CYJ00_RS11645;Name=CYJ00_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11645;old_locus_tag=CYJ00_011650
NZ_PJUS02000396.1	Protein Homology	CDS	10364	10993	.	-	0	ID=cds-WP_020219449.1;Parent=gene-CYJ00_RS11645;Dbxref=GenBank:WP_020219449.1;Name=WP_020219449.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219449.1;locus_tag=CYJ00_RS11645;product=class I SAM-dependent methyltransferase;protein_id=WP_020219449.1;transl_table=11
NZ_PJUS02000396.1	RefSeq	gene	11379	11712	.	-	.	ID=gene-CYJ00_RS11650;Name=CYJ00_RS11650;end_range=11712,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11650;old_locus_tag=CYJ00_011655;partial=true
NZ_PJUS02000396.1	Protein Homology	CDS	11379	11712	.	-	1	ID=cds-WP_490327970.1;Parent=gene-CYJ00_RS11650;Dbxref=GenBank:WP_490327970.1;Name=WP_490327970.1;end_range=11712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662459.1;locus_tag=CYJ00_RS11650;partial=true;product=ABC-2 transporter permease;protein_id=WP_490327970.1;transl_table=11
##sequence-region NZ_PJUS02000099.1 1 9453
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000099.1	RefSeq	region	1	9453	.	+	.	ID=NZ_PJUS02000099.1:1..9453;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000099.1	RefSeq	gene	1	1501	.	-	.	ID=gene-CYJ00_RS02755;Name=CYJ00_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02755;old_locus_tag=CYJ00_002755;partial=true;start_range=.,1
NZ_PJUS02000099.1	Protein Homology	CDS	1	1501	.	-	0	ID=cds-WP_274539972.1;Parent=gene-CYJ00_RS02755;Dbxref=GenBank:WP_274539972.1;Name=WP_274539972.1;Ontology_term=GO:0008152,GO:0015930;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=CYJ00_RS02755;partial=true;product=class II glutamine amidotransferase;protein_id=WP_274539972.1;start_range=.,1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	1624	2502	.	+	.	ID=gene-CYJ00_RS02760;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=CYJ00_RS02760;old_locus_tag=CYJ00_002760
NZ_PJUS02000099.1	Protein Homology	CDS	1624	2502	.	+	0	ID=cds-WP_100006631.1;Parent=gene-CYJ00_RS02760;Dbxref=GenBank:WP_100006631.1;Name=WP_100006631.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=CYJ00_RS02760;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_100006631.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	2515	3624	.	+	.	ID=gene-CYJ00_RS02765;Name=CYJ00_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02765;old_locus_tag=CYJ00_002765
NZ_PJUS02000099.1	Protein Homology	CDS	2515	3624	.	+	0	ID=cds-WP_070407723.1;Parent=gene-CYJ00_RS02765;Dbxref=GenBank:WP_070407723.1;Name=WP_070407723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614836.1;locus_tag=CYJ00_RS02765;product=YibE/F family protein;protein_id=WP_070407723.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	3621	4394	.	+	.	ID=gene-CYJ00_RS02770;Name=CYJ00_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02770;old_locus_tag=CYJ00_002770
NZ_PJUS02000099.1	Protein Homology	CDS	3621	4394	.	+	0	ID=cds-WP_063284950.1;Parent=gene-CYJ00_RS02770;Dbxref=GenBank:WP_063284950.1;Name=WP_063284950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=CYJ00_RS02770;product=YibE/F family protein;protein_id=WP_063284950.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	4443	6704	.	+	.	ID=gene-CYJ00_RS02775;Name=CYJ00_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02775;old_locus_tag=CYJ00_002775
NZ_PJUS02000099.1	Protein Homology	CDS	4443	6704	.	+	0	ID=cds-WP_063279044.1;Parent=gene-CYJ00_RS02775;Dbxref=GenBank:WP_063279044.1;Name=WP_063279044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166373.1;locus_tag=CYJ00_RS02775;product=ATP-binding cassette domain-containing protein;protein_id=WP_063279044.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	6912	7427	.	-	.	ID=gene-CYJ00_RS02780;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02780;old_locus_tag=CYJ00_002780
NZ_PJUS02000099.1	Protein Homology	CDS	6912	7427	.	-	0	ID=cds-WP_014614839.1;Parent=gene-CYJ00_RS02780;Dbxref=GenBank:WP_014614839.1;Name=WP_014614839.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=CYJ00_RS02780;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_014614839.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	7732	8007	.	+	.	ID=gene-CYJ00_RS02785;Name=CYJ00_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02785;old_locus_tag=CYJ00_002785
NZ_PJUS02000099.1	Protein Homology	CDS	7732	8007	.	+	0	ID=cds-WP_015728571.1;Parent=gene-CYJ00_RS02785;Dbxref=GenBank:WP_015728571.1;Name=WP_015728571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728571.1;locus_tag=CYJ00_RS02785;product=hypothetical protein;protein_id=WP_015728571.1;transl_table=11
NZ_PJUS02000099.1	RefSeq	gene	8388	9395	.	-	.	ID=gene-CYJ00_RS02790;Name=CYJ00_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02790;old_locus_tag=CYJ00_002790
NZ_PJUS02000099.1	Protein Homology	CDS	8388	9395	.	-	0	ID=cds-WP_014614841.1;Parent=gene-CYJ00_RS02790;Dbxref=GenBank:WP_014614841.1;Name=WP_014614841.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498204.1;locus_tag=CYJ00_RS02790;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614841.1;transl_table=11
##sequence-region NZ_PJUS02000359.1 1 405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000359.1	RefSeq	region	1	405	.	+	.	ID=NZ_PJUS02000359.1:1..405;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000359.1	RefSeq	gene	1	382	.	-	.	ID=gene-CYJ00_RS10850;Name=CYJ00_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10850;old_locus_tag=CYJ00_010855;partial=true;start_range=.,1
NZ_PJUS02000359.1	Protein Homology	CDS	1	382	.	-	0	ID=cds-WP_133158353.1;Parent=gene-CYJ00_RS10850;Dbxref=GenBank:WP_133158353.1;Name=WP_133158353.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614676.1;locus_tag=CYJ00_RS10850;partial=true;product=trypsin-like serine protease;protein_id=WP_133158353.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000368.1 1 344
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000368.1	RefSeq	region	1	344	.	+	.	ID=NZ_PJUS02000368.1:1..344;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000202.1 1 12869
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000202.1	RefSeq	region	1	12869	.	+	.	ID=NZ_PJUS02000202.1:1..12869;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000202.1	RefSeq	gene	102	497	.	-	.	ID=gene-CYJ00_RS05555;Name=CYJ00_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05555;old_locus_tag=CYJ00_005560
NZ_PJUS02000202.1	Protein Homology	CDS	102	497	.	-	0	ID=cds-WP_014612980.1;Parent=gene-CYJ00_RS05555;Dbxref=GenBank:WP_014612980.1;Name=WP_014612980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=CYJ00_RS05555;product=hypothetical protein;protein_id=WP_014612980.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	569	1726	.	-	.	ID=gene-CYJ00_RS05560;Name=CYJ00_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05560;old_locus_tag=CYJ00_005565
NZ_PJUS02000202.1	Protein Homology	CDS	569	1726	.	-	0	ID=cds-WP_014612979.1;Parent=gene-CYJ00_RS05560;Dbxref=GenBank:WP_014612979.1;Name=WP_014612979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165895.1;locus_tag=CYJ00_RS05560;product=FAD/NAD(P)-binding protein;protein_id=WP_014612979.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	1953	2837	.	-	.	ID=gene-CYJ00_RS05565;Name=CYJ00_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05565;old_locus_tag=CYJ00_005570
NZ_PJUS02000202.1	Protein Homology	CDS	1953	2837	.	-	0	ID=cds-WP_096533450.1;Parent=gene-CYJ00_RS05565;Dbxref=GenBank:WP_096533450.1;Name=WP_096533450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_464196.1;locus_tag=CYJ00_RS05565;product=SDR family oxidoreductase;protein_id=WP_096533450.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	3218	4735	.	+	.	ID=gene-CYJ00_RS05570;Name=CYJ00_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05570;old_locus_tag=CYJ00_005575
NZ_PJUS02000202.1	Protein Homology	CDS	3218	4735	.	+	0	ID=cds-WP_015729630.1;Parent=gene-CYJ00_RS05570;Dbxref=GenBank:WP_015729630.1;Name=WP_015729630.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=CYJ00_RS05570;product=M4 family metallopeptidase;protein_id=WP_015729630.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	4942	6066	.	-	.	ID=gene-CYJ00_RS05575;Name=CYJ00_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05575;old_locus_tag=CYJ00_005580
NZ_PJUS02000202.1	Protein Homology	CDS	4942	6066	.	-	0	ID=cds-WP_101457739.1;Parent=gene-CYJ00_RS05575;Dbxref=GenBank:WP_101457739.1;Name=WP_101457739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=CYJ00_RS05575;product=hypothetical protein;protein_id=WP_101457739.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	6253	6462	.	+	.	ID=gene-CYJ00_RS05580;Name=CYJ00_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05580;old_locus_tag=CYJ00_005585
NZ_PJUS02000202.1	Protein Homology	CDS	6253	6462	.	+	0	ID=cds-WP_014612975.1;Parent=gene-CYJ00_RS05580;Dbxref=GenBank:WP_014612975.1;Name=WP_014612975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167250.1;locus_tag=CYJ00_RS05580;product=hypothetical protein;protein_id=WP_014612975.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	6544	7419	.	-	.	ID=gene-CYJ00_RS05585;Name=CYJ00_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05585;old_locus_tag=CYJ00_005590
NZ_PJUS02000202.1	Protein Homology	CDS	6544	7419	.	-	0	ID=cds-WP_014612974.1;Parent=gene-CYJ00_RS05585;Dbxref=GenBank:WP_014612974.1;Name=WP_014612974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=CYJ00_RS05585;product=alpha/beta fold hydrolase;protein_id=WP_014612974.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	7523	8941	.	-	.	ID=gene-CYJ00_RS05590;Name=CYJ00_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05590;old_locus_tag=CYJ00_005595
NZ_PJUS02000202.1	Protein Homology	CDS	7523	8941	.	-	0	ID=cds-WP_041614885.1;Parent=gene-CYJ00_RS05590;Dbxref=GenBank:WP_041614885.1;Name=WP_041614885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=CYJ00_RS05590;product=phosphate--AMP phosphotransferase;protein_id=WP_041614885.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	9363	10070	.	+	.	ID=gene-CYJ00_RS05595;Name=CYJ00_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05595;old_locus_tag=CYJ00_005600
NZ_PJUS02000202.1	Protein Homology	CDS	9363	10070	.	+	0	ID=cds-WP_014612972.1;Parent=gene-CYJ00_RS05595;Dbxref=GenBank:WP_014612972.1;Name=WP_014612972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=CYJ00_RS05595;product=hypothetical protein;protein_id=WP_014612972.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	10238	10795	.	+	.	ID=gene-CYJ00_RS05600;Name=CYJ00_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05600;old_locus_tag=CYJ00_005605
NZ_PJUS02000202.1	Protein Homology	CDS	10238	10795	.	+	0	ID=cds-WP_063278848.1;Parent=gene-CYJ00_RS05600;Dbxref=GenBank:WP_063278848.1;Name=WP_063278848.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612971.1;locus_tag=CYJ00_RS05600;product=M23 family metallopeptidase;protein_id=WP_063278848.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	11105	11824	.	-	.	ID=gene-CYJ00_RS05605;Name=CYJ00_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05605;old_locus_tag=CYJ00_005610
NZ_PJUS02000202.1	Protein Homology	CDS	11105	11824	.	-	0	ID=cds-WP_014612970.1;Parent=gene-CYJ00_RS05605;Dbxref=GenBank:WP_014612970.1;Name=WP_014612970.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167245.1;locus_tag=CYJ00_RS05605;product=GTP pyrophosphokinase;protein_id=WP_014612970.1;transl_table=11
NZ_PJUS02000202.1	RefSeq	gene	12159	12788	.	-	.	ID=gene-CYJ00_RS05610;Name=CYJ00_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05610;old_locus_tag=CYJ00_005615
NZ_PJUS02000202.1	Protein Homology	CDS	12159	12788	.	-	0	ID=cds-WP_015729635.1;Parent=gene-CYJ00_RS05610;Dbxref=GenBank:WP_015729635.1;Name=WP_015729635.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729635.1;locus_tag=CYJ00_RS05610;product=nitroreductase family protein;protein_id=WP_015729635.1;transl_table=11
##sequence-region NZ_PJUS02000075.1 1 498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000075.1	RefSeq	region	1	498	.	+	.	ID=NZ_PJUS02000075.1:1..498;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000075.1	RefSeq	gene	58	498	.	+	.	ID=gene-CYJ00_RS02010;Name=CYJ00_RS02010;end_range=498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02010;old_locus_tag=CYJ00_002010;partial=true
NZ_PJUS02000075.1	Protein Homology	CDS	58	498	.	+	0	ID=cds-WP_133158313.1;Parent=gene-CYJ00_RS02010;Dbxref=GenBank:WP_133158313.1;Name=WP_133158313.1;end_range=498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CYJ00_RS02010;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_133158313.1;transl_table=11
##sequence-region NZ_PJUS02000086.1 1 369
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000086.1	RefSeq	region	1	369	.	+	.	ID=NZ_PJUS02000086.1:1..369;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000086.1	RefSeq	pseudogene	40	369	.	+	.	ID=gene-CYJ00_RS02350;Name=CYJ00_RS02350;end_range=369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS02350;old_locus_tag=CYJ00_002350;partial=true;pseudo=true
NZ_PJUS02000086.1	Protein Homology	CDS	40	369	.	+	0	ID=cds-CYJ00_RS02350;Parent=gene-CYJ00_RS02350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612783.1;locus_tag=CYJ00_RS02350;partial=true;product=intercellular adhesin biosynthesis polysaccharide N-deacetylase;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000258.1 1 416
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000258.1	RefSeq	region	1	416	.	+	.	ID=NZ_PJUS02000258.1:1..416;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000258.1	RefSeq	gene	115	405	.	-	.	ID=gene-CYJ00_RS07060;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07060;old_locus_tag=CYJ00_007065
NZ_PJUS02000258.1	Protein Homology	CDS	115	405	.	-	0	ID=cds-WP_014614288.1;Parent=gene-CYJ00_RS07060;Dbxref=GenBank:WP_014614288.1;Name=WP_014614288.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=CYJ00_RS07060;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_014614288.1;transl_table=11
##sequence-region NZ_PJUS02000288.1 1 384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000288.1	RefSeq	region	1	384	.	+	.	ID=NZ_PJUS02000288.1:1..384;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000288.1	RefSeq	gene	59	141	.	+	.	ID=gene-CYJ00_RS07675;Name=CYJ00_RS07675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS07675;old_locus_tag=CYJ00_007680
NZ_PJUS02000288.1	tRNAscan-SE	tRNA	59	141	.	+	.	ID=rna-CYJ00_RS07675;Parent=gene-CYJ00_RS07675;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07675;product=tRNA-Leu
NZ_PJUS02000288.1	tRNAscan-SE	exon	59	141	.	+	.	ID=exon-CYJ00_RS07675-1;Parent=rna-CYJ00_RS07675;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07675;product=tRNA-Leu
NZ_PJUS02000288.1	RefSeq	gene	166	239	.	+	.	ID=gene-CYJ00_RS07680;Name=CYJ00_RS07680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS07680;old_locus_tag=CYJ00_007685
NZ_PJUS02000288.1	tRNAscan-SE	tRNA	166	239	.	+	.	ID=rna-CYJ00_RS07680;Parent=gene-CYJ00_RS07680;anticodon=(pos:198..200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07680;product=tRNA-Gly
NZ_PJUS02000288.1	tRNAscan-SE	exon	166	239	.	+	.	ID=exon-CYJ00_RS07680-1;Parent=rna-CYJ00_RS07680;anticodon=(pos:198..200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS07680;product=tRNA-Gly
##sequence-region NZ_PJUS02000299.1 1 11794
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000299.1	RefSeq	region	1	11794	.	+	.	ID=NZ_PJUS02000299.1:1..11794;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000299.1	RefSeq	gene	131	3283	.	-	.	ID=gene-CYJ00_RS07885;Name=CYJ00_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07885;old_locus_tag=CYJ00_007890
NZ_PJUS02000299.1	Protein Homology	CDS	131	3283	.	-	0	ID=cds-WP_101457740.1;Parent=gene-CYJ00_RS07885;Dbxref=GenBank:WP_101457740.1;Name=WP_101457740.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=CYJ00_RS07885;product=efflux RND transporter permease subunit;protein_id=WP_101457740.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	3502	4782	.	-	.	ID=gene-CYJ00_RS07890;Name=CYJ00_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07890;old_locus_tag=CYJ00_007895
NZ_PJUS02000299.1	Protein Homology	CDS	3502	4782	.	-	0	ID=cds-WP_015729520.1;Parent=gene-CYJ00_RS07890;Dbxref=GenBank:WP_015729520.1;Name=WP_015729520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220115.1;locus_tag=CYJ00_RS07890;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_015729520.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	4899	5153	.	+	.	ID=gene-CYJ00_RS07895;Name=CYJ00_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07895;old_locus_tag=CYJ00_007900
NZ_PJUS02000299.1	Protein Homology	CDS	4899	5153	.	+	0	ID=cds-WP_014613200.1;Parent=gene-CYJ00_RS07895;Dbxref=GenBank:WP_014613200.1;Name=WP_014613200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166608.1;locus_tag=CYJ00_RS07895;product=hypothetical protein;protein_id=WP_014613200.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	5144	5911	.	-	.	ID=gene-CYJ00_RS07900;Name=CYJ00_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07900;old_locus_tag=CYJ00_007905
NZ_PJUS02000299.1	Protein Homology	CDS	5144	5911	.	-	0	ID=cds-WP_037542428.1;Parent=gene-CYJ00_RS07900;Dbxref=GenBank:WP_037542428.1;Name=WP_037542428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169683.1;locus_tag=CYJ00_RS07900;product=VOC family protein;protein_id=WP_037542428.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	6085	6531	.	+	.	ID=gene-CYJ00_RS07905;Name=CYJ00_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07905;old_locus_tag=CYJ00_007910
NZ_PJUS02000299.1	Protein Homology	CDS	6085	6531	.	+	0	ID=cds-WP_014613198.1;Parent=gene-CYJ00_RS07905;Dbxref=GenBank:WP_014613198.1;Name=WP_014613198.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220116.1;locus_tag=CYJ00_RS07905;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613198.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	7026	8897	.	+	.	ID=gene-CYJ00_RS07910;Name=CYJ00_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07910;old_locus_tag=CYJ00_007915
NZ_PJUS02000299.1	Protein Homology	CDS	7026	8897	.	+	0	ID=cds-WP_101457741.1;Parent=gene-CYJ00_RS07910;Dbxref=GenBank:WP_101457741.1;Name=WP_101457741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=CYJ00_RS07910;product=DUF8508 domain-containing protein;protein_id=WP_101457741.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	8974	9996	.	-	.	ID=gene-CYJ00_RS07915;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07915;old_locus_tag=CYJ00_007920
NZ_PJUS02000299.1	Protein Homology	CDS	8974	9996	.	-	0	ID=cds-WP_101457742.1;Parent=gene-CYJ00_RS07915;Dbxref=GenBank:WP_101457742.1;Name=WP_101457742.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CYJ00_RS07915;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_101457742.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	10013	10618	.	-	.	ID=gene-CYJ00_RS07920;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07920;old_locus_tag=CYJ00_007925
NZ_PJUS02000299.1	Protein Homology	CDS	10013	10618	.	-	0	ID=cds-WP_037542422.1;Parent=gene-CYJ00_RS07920;Dbxref=GenBank:WP_037542422.1;Name=WP_037542422.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613195.1;locus_tag=CYJ00_RS07920;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_037542422.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	10628	10861	.	-	.	ID=gene-CYJ00_RS07925;Name=CYJ00_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07925;old_locus_tag=CYJ00_007930
NZ_PJUS02000299.1	Protein Homology	CDS	10628	10861	.	-	0	ID=cds-WP_014613194.1;Parent=gene-CYJ00_RS07925;Dbxref=GenBank:WP_014613194.1;Name=WP_014613194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=CYJ00_RS07925;product=MoaD/ThiS family protein;protein_id=WP_014613194.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	10858	11316	.	-	.	ID=gene-CYJ00_RS07930;Name=CYJ00_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07930;old_locus_tag=CYJ00_007935
NZ_PJUS02000299.1	Protein Homology	CDS	10858	11316	.	-	0	ID=cds-WP_014613193.1;Parent=gene-CYJ00_RS07930;Dbxref=GenBank:WP_014613193.1;Name=WP_014613193.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613193.1;locus_tag=CYJ00_RS07930;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_014613193.1;transl_table=11
NZ_PJUS02000299.1	RefSeq	gene	11322	11792	.	-	.	ID=gene-CYJ00_RS07935;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07935;old_locus_tag=CYJ00_007940
NZ_PJUS02000299.1	Protein Homology	CDS	11322	11792	.	-	0	ID=cds-WP_241956948.1;Parent=gene-CYJ00_RS07935;Dbxref=GenBank:WP_241956948.1;Name=WP_241956948.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613192.1;locus_tag=CYJ00_RS07935;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_241956948.1;transl_table=11
##sequence-region NZ_PJUS02000102.1 1 339
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000102.1	RefSeq	region	1	339	.	+	.	ID=NZ_PJUS02000102.1:1..339;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000102.1	RefSeq	gene	1	339	.	+	.	ID=gene-CYJ00_RS13095;Name=CYJ00_RS13095;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13095;partial=true;start_range=.,1
NZ_PJUS02000102.1	Protein Homology	CDS	1	339	.	+	0	ID=cds-WP_241956934.1;Parent=gene-CYJ00_RS13095;Dbxref=GenBank:WP_241956934.1;Name=WP_241956934.1;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220337.1;locus_tag=CYJ00_RS13095;partial=true;product=MSCRAMM family adhesin SdrC;protein_id=WP_241956934.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000187.1 1 396
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000187.1	RefSeq	region	1	396	.	+	.	ID=NZ_PJUS02000187.1:1..396;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000187.1	RefSeq	pseudogene	1	396	.	-	.	ID=gene-CYJ00_RS05090;Name=CYJ00_RS05090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05090;old_locus_tag=CYJ00_005095;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000187.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-CYJ00_RS05090;Parent=gene-CYJ00_RS05090;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612747.1;locus_tag=CYJ00_RS05090;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000175.1 1 468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000175.1	RefSeq	region	1	468	.	+	.	ID=NZ_PJUS02000175.1:1..468;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000175.1	RefSeq	gene	125	316	.	+	.	ID=gene-CYJ00_RS13795;Name=CYJ00_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13795
NZ_PJUS02000175.1	Protein Homology	CDS	125	316	.	+	0	ID=cds-WP_197737724.1;Parent=gene-CYJ00_RS13795;Dbxref=GenBank:WP_197737724.1;Name=WP_197737724.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ00_RS13795;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_197737724.1;transl_table=11
NZ_PJUS02000175.1	RefSeq	gene	240	437	.	+	.	ID=gene-CYJ00_RS13235;Name=CYJ00_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13235;old_locus_tag=CYJ00_004875
NZ_PJUS02000175.1	Protein Homology	CDS	240	437	.	+	0	ID=cds-WP_198597680.1;Parent=gene-CYJ00_RS13235;Dbxref=GenBank:WP_198597680.1;Name=WP_198597680.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ00_RS13235;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_198597680.1;transl_table=11
##sequence-region NZ_PJUS02000427.1 1 283
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000427.1	RefSeq	region	1	283	.	+	.	ID=NZ_PJUS02000427.1:1..283;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000427.1	RefSeq	gene	39	112	.	-	.	ID=gene-CYJ00_RS12610;Name=CYJ00_RS12610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12610;old_locus_tag=CYJ00_012615
NZ_PJUS02000427.1	tRNAscan-SE	tRNA	39	112	.	-	.	ID=rna-CYJ00_RS12610;Parent=gene-CYJ00_RS12610;anticodon=(pos:complement(78..80));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12610;product=tRNA-Gly
NZ_PJUS02000427.1	tRNAscan-SE	exon	39	112	.	-	.	ID=exon-CYJ00_RS12610-1;Parent=rna-CYJ00_RS12610;anticodon=(pos:complement(78..80));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12610;product=tRNA-Gly
NZ_PJUS02000427.1	RefSeq	gene	132	204	.	-	.	ID=gene-CYJ00_RS12615;Name=CYJ00_RS12615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12615;old_locus_tag=CYJ00_012620
NZ_PJUS02000427.1	tRNAscan-SE	tRNA	132	204	.	-	.	ID=rna-CYJ00_RS12615;Parent=gene-CYJ00_RS12615;anticodon=(pos:complement(169..171));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12615;product=tRNA-His
NZ_PJUS02000427.1	tRNAscan-SE	exon	132	204	.	-	.	ID=exon-CYJ00_RS12615-1;Parent=rna-CYJ00_RS12615;anticodon=(pos:complement(169..171));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12615;product=tRNA-His
NZ_PJUS02000427.1	RefSeq	gene	219	283	.	-	.	ID=gene-CYJ00_RS12620;Name=CYJ00_RS12620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS12620;old_locus_tag=CYJ00_012625
NZ_PJUS02000427.1	tRNAscan-SE	tRNA	219	283	.	-	.	ID=rna-CYJ00_RS12620;Parent=gene-CYJ00_RS12620;anticodon=(pos:complement(256..258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12620;product=tRNA-Phe
NZ_PJUS02000427.1	tRNAscan-SE	exon	219	283	.	-	.	ID=exon-CYJ00_RS12620-1;Parent=rna-CYJ00_RS12620;anticodon=(pos:complement(256..258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS12620;product=tRNA-Phe
##sequence-region NZ_PJUS02000423.1 1 12631
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000423.1	RefSeq	region	1	12631	.	+	.	ID=NZ_PJUS02000423.1:1..12631;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000423.1	RefSeq	gene	780	1985	.	+	.	ID=gene-CYJ00_RS12500;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12500;old_locus_tag=CYJ00_012505
NZ_PJUS02000423.1	Protein Homology	CDS	780	1985	.	+	0	ID=cds-WP_041613233.1;Parent=gene-CYJ00_RS12500;Dbxref=GenBank:WP_041613233.1;Name=WP_041613233.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167385.1;locus_tag=CYJ00_RS12500;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_041613233.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	1982	4390	.	+	.	ID=gene-CYJ00_RS12505;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12505;old_locus_tag=CYJ00_012510
NZ_PJUS02000423.1	Protein Homology	CDS	1982	4390	.	+	0	ID=cds-WP_014614144.1;Parent=gene-CYJ00_RS12505;Dbxref=GenBank:WP_014614144.1;Name=WP_014614144.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560866.1;locus_tag=CYJ00_RS12505;product=primosomal protein N';protein_id=WP_014614144.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	4647	5132	.	+	.	ID=gene-CYJ00_RS12510;Name=CYJ00_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12510;old_locus_tag=CYJ00_012515
NZ_PJUS02000423.1	Protein Homology	CDS	4647	5132	.	+	0	ID=cds-WP_014614143.1;Parent=gene-CYJ00_RS12510;Dbxref=GenBank:WP_014614143.1;Name=WP_014614143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614143.1;locus_tag=CYJ00_RS12510;product=peptide deformylase;protein_id=WP_014614143.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	5125	6057	.	+	.	ID=gene-CYJ00_RS12515;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CYJ00_RS12515;old_locus_tag=CYJ00_012520
NZ_PJUS02000423.1	Protein Homology	CDS	5125	6057	.	+	0	ID=cds-WP_014614142.1;Parent=gene-CYJ00_RS12515;Dbxref=GenBank:WP_014614142.1;Name=WP_014614142.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=CYJ00_RS12515;product=methionyl-tRNA formyltransferase;protein_id=WP_014614142.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	6058	7359	.	+	.	ID=gene-CYJ00_RS12520;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12520;old_locus_tag=CYJ00_012525
NZ_PJUS02000423.1	Protein Homology	CDS	6058	7359	.	+	0	ID=cds-WP_100006723.1;Parent=gene-CYJ00_RS12520;Dbxref=GenBank:WP_100006723.1;Name=WP_100006723.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614141.1;locus_tag=CYJ00_RS12520;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_100006723.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	7365	8459	.	+	.	ID=gene-CYJ00_RS12525;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=CYJ00_RS12525;old_locus_tag=CYJ00_012530
NZ_PJUS02000423.1	Protein Homology	CDS	7365	8459	.	+	0	ID=cds-WP_014614140.1;Parent=gene-CYJ00_RS12525;Dbxref=GenBank:WP_014614140.1;Name=WP_014614140.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CYJ00_RS12525;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_014614140.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	8466	9209	.	+	.	ID=gene-CYJ00_RS12530;Name=CYJ00_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12530;old_locus_tag=CYJ00_012535
NZ_PJUS02000423.1	Protein Homology	CDS	8466	9209	.	+	0	ID=cds-WP_014614139.1;Parent=gene-CYJ00_RS12530;Dbxref=GenBank:WP_014614139.1;Name=WP_014614139.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=CYJ00_RS12530;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_014614139.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	9206	11212	.	+	.	ID=gene-CYJ00_RS12535;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12535;old_locus_tag=CYJ00_012540
NZ_PJUS02000423.1	Protein Homology	CDS	9206	11212	.	+	0	ID=cds-WP_100006722.1;Parent=gene-CYJ00_RS12535;Dbxref=GenBank:WP_100006722.1;Name=WP_100006722.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729014.1;locus_tag=CYJ00_RS12535;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_100006722.1;transl_table=11
NZ_PJUS02000423.1	RefSeq	gene	11972	12631	.	+	.	ID=gene-CYJ00_RS12540;Name=CYJ00_RS12540;end_range=12631,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12540;old_locus_tag=CYJ00_012545;partial=true
NZ_PJUS02000423.1	Protein Homology	CDS	11972	12631	.	+	0	ID=cds-WP_490327971.1;Parent=gene-CYJ00_RS12540;Dbxref=GenBank:WP_490327971.1;Name=WP_490327971.1;end_range=12631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614137.1;locus_tag=CYJ00_RS12540;partial=true;product=cytochrome P450 family protein;protein_id=WP_490327971.1;transl_table=11
##sequence-region NZ_PJUS02000135.1 1 362
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000135.1	RefSeq	region	1	362	.	+	.	ID=NZ_PJUS02000135.1:1..362;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000135.1	RefSeq	gene	49	327	.	+	.	ID=gene-CYJ00_RS03740;Name=CYJ00_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03740;old_locus_tag=CYJ00_003745
NZ_PJUS02000135.1	Protein Homology	CDS	49	327	.	+	0	ID=cds-WP_014613139.1;Parent=gene-CYJ00_RS03740;Dbxref=GenBank:WP_014613139.1;Name=WP_014613139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=CYJ00_RS03740;product=hypothetical protein;protein_id=WP_014613139.1;transl_table=11
##sequence-region NZ_PJUS02000400.1 1 307
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000400.1	RefSeq	region	1	307	.	+	.	ID=NZ_PJUS02000400.1:1..307;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000400.1	RefSeq	pseudogene	1	307	.	-	.	ID=gene-CYJ00_RS11735;Name=CYJ00_RS11735;end_range=307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11735;old_locus_tag=CYJ00_011740;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000400.1	Protein Homology	CDS	1	307	.	-	0	ID=cds-CYJ00_RS11735;Parent=gene-CYJ00_RS11735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959330.1;locus_tag=CYJ00_RS11735;partial=true;product=accessory Sec system glycosyltransferase GtfA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000087.1 1 345
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000087.1	RefSeq	region	1	345	.	+	.	ID=NZ_PJUS02000087.1:1..345;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000087.1	RefSeq	gene	1	345	.	+	.	ID=gene-CYJ00_RS02355;Name=CYJ00_RS02355;end_range=345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02355;old_locus_tag=CYJ00_002355;partial=true;start_range=.,1
NZ_PJUS02000087.1	Protein Homology	CDS	1	345	.	+	1	ID=cds-WP_133158317.1;Parent=gene-CYJ00_RS02355;Dbxref=GenBank:WP_133158317.1;Name=WP_133158317.1;Ontology_term=GO:0044038,GO:0016755;end_range=345,.;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ00_RS02355;partial=true;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;protein_id=WP_133158317.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000196.1 1 340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000196.1	RefSeq	region	1	340	.	+	.	ID=NZ_PJUS02000196.1:1..340;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000196.1	RefSeq	gene	40	340	.	+	.	ID=gene-CYJ00_RS05355;Name=CYJ00_RS05355;end_range=340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05355;old_locus_tag=CYJ00_005360;partial=true
NZ_PJUS02000196.1	Protein Homology	CDS	40	340	.	+	0	ID=cds-WP_198597681.1;Parent=gene-CYJ00_RS05355;Dbxref=GenBank:WP_198597681.1;Name=WP_198597681.1;Ontology_term=GO:0009372,GO:0008233,GO:0016020;end_range=340,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275304.1;locus_tag=CYJ00_RS05355;partial=true;product=accessory gene regulator B family protein;protein_id=WP_198597681.1;transl_table=11
##sequence-region NZ_PJUS02000116.1 1 306
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000116.1	RefSeq	region	1	306	.	+	.	ID=NZ_PJUS02000116.1:1..306;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000013.1 1 16419
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000013.1	RefSeq	region	1	16419	.	+	.	ID=NZ_PJUS02000013.1:1..16419;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000013.1	RefSeq	gene	46	1104	.	+	.	ID=gene-CYJ00_RS00385;Name=CYJ00_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00385;old_locus_tag=CYJ00_000385
NZ_PJUS02000013.1	Protein Homology	CDS	46	1104	.	+	0	ID=cds-WP_014613526.1;Parent=gene-CYJ00_RS00385;Dbxref=GenBank:WP_014613526.1;Name=WP_014613526.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613526.1;locus_tag=CYJ00_RS00385;product=PTS sugar transporter subunit IIC;protein_id=WP_014613526.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	1289	2749	.	+	.	ID=gene-CYJ00_RS00390;Name=CYJ00_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00390;old_locus_tag=CYJ00_000390
NZ_PJUS02000013.1	Protein Homology	CDS	1289	2749	.	+	0	ID=cds-WP_070407784.1;Parent=gene-CYJ00_RS00390;Dbxref=GenBank:WP_070407784.1;Name=WP_070407784.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470402.1;locus_tag=CYJ00_RS00390;product=ABC transporter substrate-binding protein/permease;protein_id=WP_070407784.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	2742	3467	.	+	.	ID=gene-CYJ00_RS00395;Name=CYJ00_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00395;old_locus_tag=CYJ00_000395
NZ_PJUS02000013.1	Protein Homology	CDS	2742	3467	.	+	0	ID=cds-WP_014613528.1;Parent=gene-CYJ00_RS00395;Dbxref=GenBank:WP_014613528.1;Name=WP_014613528.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613528.1;locus_tag=CYJ00_RS00395;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014613528.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	3623	4753	.	+	.	ID=gene-CYJ00_RS00400;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CYJ00_RS00400;old_locus_tag=CYJ00_000400
NZ_PJUS02000013.1	Protein Homology	CDS	3623	4753	.	+	0	ID=cds-WP_014613529.1;Parent=gene-CYJ00_RS00400;Dbxref=GenBank:WP_014613529.1;Name=WP_014613529.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613529.1;locus_tag=CYJ00_RS00400;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_014613529.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	4753	5223	.	+	.	ID=gene-CYJ00_RS00405;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CYJ00_RS00405;old_locus_tag=CYJ00_000405
NZ_PJUS02000013.1	Protein Homology	CDS	4753	5223	.	+	0	ID=cds-WP_014613530.1;Parent=gene-CYJ00_RS00405;Dbxref=GenBank:WP_014613530.1;Name=WP_014613530.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=CYJ00_RS00405;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014613530.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	5417	6016	.	+	.	ID=gene-CYJ00_RS00410;Name=CYJ00_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00410;old_locus_tag=CYJ00_000410
NZ_PJUS02000013.1	Protein Homology	CDS	5417	6016	.	+	0	ID=cds-WP_014613531.1;Parent=gene-CYJ00_RS00410;Dbxref=GenBank:WP_014613531.1;Name=WP_014613531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167999.1;locus_tag=CYJ00_RS00410;product=6-phosphogluconolactonase;protein_id=WP_014613531.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	6037	6198	.	+	.	ID=gene-CYJ00_RS13190;Name=CYJ00_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13190
NZ_PJUS02000013.1	Protein Homology	CDS	6037	6198	.	+	0	ID=cds-WP_014613532.1;Parent=gene-CYJ00_RS13190;Dbxref=GenBank:WP_014613532.1;Name=WP_014613532.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=CYJ00_RS13190;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_014613532.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	6319	6762	.	+	.	ID=gene-CYJ00_RS00415;Name=CYJ00_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00415;old_locus_tag=CYJ00_000415
NZ_PJUS02000013.1	Protein Homology	CDS	6319	6762	.	+	0	ID=cds-WP_101457744.1;Parent=gene-CYJ00_RS00415;Dbxref=GenBank:WP_101457744.1;Name=WP_101457744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164970.1;locus_tag=CYJ00_RS00415;product=hypothetical protein;protein_id=WP_101457744.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	6992	8377	.	+	.	ID=gene-CYJ00_RS00420;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00420;old_locus_tag=CYJ00_000420
NZ_PJUS02000013.1	Protein Homology	CDS	6992	8377	.	+	0	ID=cds-WP_014613534.1;Parent=gene-CYJ00_RS00420;Dbxref=GenBank:WP_014613534.1;Name=WP_014613534.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CYJ00_RS00420;product=class II fumarate hydratase;protein_id=WP_014613534.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	8398	9924	.	+	.	ID=gene-CYJ00_RS00425;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CYJ00_RS00425;old_locus_tag=CYJ00_000425
NZ_PJUS02000013.1	Protein Homology	CDS	8398	9924	.	+	0	ID=cds-WP_014613535.1;Parent=gene-CYJ00_RS00425;Dbxref=GenBank:WP_014613535.1;Name=WP_014613535.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613535.1;locus_tag=CYJ00_RS00425;product=exopolyphosphatase;protein_id=WP_014613535.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	10006	12168	.	+	.	ID=gene-CYJ00_RS00430;Name=CYJ00_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00430;old_locus_tag=CYJ00_000430
NZ_PJUS02000013.1	Protein Homology	CDS	10006	12168	.	+	0	ID=cds-WP_374761578.1;Parent=gene-CYJ00_RS00430;Dbxref=GenBank:WP_374761578.1;Name=WP_374761578.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425465.1;locus_tag=CYJ00_RS00430;product=RNA degradosome polyphosphate kinase;protein_id=WP_374761578.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	12236	13066	.	-	.	ID=gene-CYJ00_RS00435;Name=CYJ00_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00435;old_locus_tag=CYJ00_000435
NZ_PJUS02000013.1	Protein Homology	CDS	12236	13066	.	-	0	ID=cds-WP_063279147.1;Parent=gene-CYJ00_RS00435;Dbxref=GenBank:WP_063279147.1;Name=WP_063279147.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=CYJ00_RS00435;product=RluA family pseudouridine synthase;protein_id=WP_063279147.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	13220	14344	.	+	.	ID=gene-CYJ00_RS00440;Name=CYJ00_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00440;old_locus_tag=CYJ00_000440
NZ_PJUS02000013.1	Protein Homology	CDS	13220	14344	.	+	0	ID=cds-WP_101457746.1;Parent=gene-CYJ00_RS00440;Dbxref=GenBank:WP_101457746.1;Name=WP_101457746.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729365.1;locus_tag=CYJ00_RS00440;product=GAF domain-containing sensor histidine kinase;protein_id=WP_101457746.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	14344	14970	.	+	.	ID=gene-CYJ00_RS00445;Name=CYJ00_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00445;old_locus_tag=CYJ00_000445
NZ_PJUS02000013.1	Protein Homology	CDS	14344	14970	.	+	0	ID=cds-WP_037542690.1;Parent=gene-CYJ00_RS00445;Dbxref=GenBank:WP_037542690.1;Name=WP_037542690.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613539.1;locus_tag=CYJ00_RS00445;product=response regulator;protein_id=WP_037542690.1;transl_table=11
NZ_PJUS02000013.1	RefSeq	gene	15121	16407	.	-	.	ID=gene-CYJ00_RS00450;Name=CYJ00_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00450;old_locus_tag=CYJ00_000450
NZ_PJUS02000013.1	Protein Homology	CDS	15121	16407	.	-	0	ID=cds-WP_101457747.1;Parent=gene-CYJ00_RS00450;Dbxref=GenBank:WP_101457747.1;Name=WP_101457747.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=CYJ00_RS00450;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_101457747.1;transl_table=11
##sequence-region NZ_PJUS02000399.1 1 455
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000399.1	RefSeq	region	1	455	.	+	.	ID=NZ_PJUS02000399.1:1..455;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000399.1	RefSeq	gene	1	400	.	-	.	ID=gene-CYJ00_RS11730;Name=CYJ00_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11730;old_locus_tag=CYJ00_011735;partial=true;start_range=.,1
NZ_PJUS02000399.1	Protein Homology	CDS	1	400	.	-	0	ID=cds-WP_133158357.1;Parent=gene-CYJ00_RS11730;Dbxref=GenBank:WP_133158357.1;Name=WP_133158357.1;Ontology_term=GO:0044038,GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ00_RS11730;partial=true;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;protein_id=WP_133158357.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000026.1 1 352
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000026.1	RefSeq	region	1	352	.	+	.	ID=NZ_PJUS02000026.1:1..352;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000026.1	RefSeq	gene	9	352	.	+	.	ID=gene-CYJ00_RS00740;Name=CYJ00_RS00740;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00740;old_locus_tag=CYJ00_000740;partial=true
NZ_PJUS02000026.1	Protein Homology	CDS	9	352	.	+	0	ID=cds-WP_198597664.1;Parent=gene-CYJ00_RS00740;Dbxref=GenBank:WP_198597664.1;Name=WP_198597664.1;Ontology_term=GO:0006741,GO:0003951;end_range=352,.;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499496.1;locus_tag=CYJ00_RS00740;partial=true;product=NAD(+)/NADH kinase;protein_id=WP_198597664.1;transl_table=11
##sequence-region NZ_PJUS02000227.1 1 300
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000227.1	RefSeq	region	1	300	.	+	.	ID=NZ_PJUS02000227.1:1..300;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000226.1 1 499
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000226.1	RefSeq	region	1	499	.	+	.	ID=NZ_PJUS02000226.1:1..499;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000226.1	RefSeq	gene	119	301	.	-	.	ID=gene-CYJ00_RS06250;Name=CYJ00_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06250;old_locus_tag=CYJ00_006255
NZ_PJUS02000226.1	Protein Homology	CDS	119	301	.	-	0	ID=cds-WP_100006520.1;Parent=gene-CYJ00_RS06250;Dbxref=GenBank:WP_100006520.1;Name=WP_100006520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729109.1;locus_tag=CYJ00_RS06250;product=hypothetical protein;protein_id=WP_100006520.1;transl_table=11
##sequence-region NZ_PJUS02000321.1 1 467
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000321.1	RefSeq	region	1	467	.	+	.	ID=NZ_PJUS02000321.1:1..467;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000265.1 1 495
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000265.1	RefSeq	region	1	495	.	+	.	ID=NZ_PJUS02000265.1:1..495;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000265.1	RefSeq	gene	208	495	.	-	.	ID=gene-CYJ00_RS07150;Name=CYJ00_RS07150;end_range=495,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07150;old_locus_tag=CYJ00_007155;partial=true
NZ_PJUS02000265.1	Protein Homology	CDS	208	495	.	-	0	ID=cds-WP_133158338.1;Parent=gene-CYJ00_RS07150;Dbxref=GenBank:WP_133158338.1;Name=WP_133158338.1;Ontology_term=GO:0006355,GO:0003677;end_range=495,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=CYJ00_RS07150;partial=true;product=UTRA domain-containing protein;protein_id=WP_133158338.1;transl_table=11
##sequence-region NZ_PJUS02000300.1 1 22040
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000300.1	RefSeq	region	1	22040	.	+	.	ID=NZ_PJUS02000300.1:1..22040;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000300.1	RefSeq	gene	2	1027	.	+	.	ID=gene-CYJ00_RS07940;Name=CYJ00_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07940;old_locus_tag=CYJ00_007945
NZ_PJUS02000300.1	Protein Homology	CDS	2	1027	.	+	0	ID=cds-WP_241956949.1;Parent=gene-CYJ00_RS07940;Dbxref=GenBank:WP_241956949.1;Name=WP_241956949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509404.1;locus_tag=CYJ00_RS07940;product=PIN/TRAM domain-containing protein;protein_id=WP_241956949.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	1028	1726	.	+	.	ID=gene-CYJ00_RS07945;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CYJ00_RS07945;old_locus_tag=CYJ00_007950
NZ_PJUS02000300.1	Protein Homology	CDS	1028	1726	.	+	0	ID=cds-WP_014614767.1;Parent=gene-CYJ00_RS07945;Dbxref=GenBank:WP_014614767.1;Name=WP_014614767.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=CYJ00_RS07945;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_014614767.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	1719	2198	.	+	.	ID=gene-CYJ00_RS07950;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CYJ00_RS07950;old_locus_tag=CYJ00_007955
NZ_PJUS02000300.1	Protein Homology	CDS	1719	2198	.	+	0	ID=cds-WP_014614766.1;Parent=gene-CYJ00_RS07950;Dbxref=GenBank:WP_014614766.1;Name=WP_014614766.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614766.1;locus_tag=CYJ00_RS07950;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_014614766.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	2275	3729	.	+	.	ID=gene-CYJ00_RS07955;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CYJ00_RS07955;old_locus_tag=CYJ00_007960
NZ_PJUS02000300.1	Protein Homology	CDS	2275	3729	.	+	0	ID=cds-WP_063284847.1;Parent=gene-CYJ00_RS07955;Dbxref=GenBank:WP_063284847.1;Name=WP_063284847.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465549.1;locus_tag=CYJ00_RS07955;product=glutamate--tRNA ligase;protein_id=WP_063284847.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	4117	4782	.	+	.	ID=gene-CYJ00_RS07960;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07960;old_locus_tag=CYJ00_007965
NZ_PJUS02000300.1	Protein Homology	CDS	4117	4782	.	+	0	ID=cds-WP_172425792.1;Parent=gene-CYJ00_RS07960;Dbxref=GenBank:WP_172425792.1;Name=WP_172425792.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723047.1;locus_tag=CYJ00_RS07960;product=serine O-acetyltransferase;protein_id=WP_172425792.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	4766	6166	.	+	.	ID=gene-CYJ00_RS07965;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CYJ00_RS07965;old_locus_tag=CYJ00_007970
NZ_PJUS02000300.1	Protein Homology	CDS	4766	6166	.	+	0	ID=cds-WP_014614763.1;Parent=gene-CYJ00_RS07965;Dbxref=GenBank:WP_014614763.1;Name=WP_014614763.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=CYJ00_RS07965;product=cysteine--tRNA ligase;protein_id=WP_014614763.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	6159	6560	.	+	.	ID=gene-CYJ00_RS07970;Name=CYJ00_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07970;old_locus_tag=CYJ00_007975
NZ_PJUS02000300.1	Protein Homology	CDS	6159	6560	.	+	0	ID=cds-WP_014614762.1;Parent=gene-CYJ00_RS07970;Dbxref=GenBank:WP_014614762.1;Name=WP_014614762.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=CYJ00_RS07970;product=Mini-ribonuclease 3;protein_id=WP_014614762.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	6566	7315	.	+	.	ID=gene-CYJ00_RS07975;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07975;old_locus_tag=CYJ00_007980
NZ_PJUS02000300.1	Protein Homology	CDS	6566	7315	.	+	0	ID=cds-WP_014614761.1;Parent=gene-CYJ00_RS07975;Dbxref=GenBank:WP_014614761.1;Name=WP_014614761.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=CYJ00_RS07975;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_014614761.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	7319	7843	.	+	.	ID=gene-CYJ00_RS07980;Name=CYJ00_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07980;old_locus_tag=CYJ00_007985
NZ_PJUS02000300.1	Protein Homology	CDS	7319	7843	.	+	0	ID=cds-WP_031253855.1;Parent=gene-CYJ00_RS07980;Dbxref=GenBank:WP_031253855.1;Name=WP_031253855.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424292.1;locus_tag=CYJ00_RS07980;product=NYN domain-containing protein;protein_id=WP_031253855.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	7920	8492	.	+	.	ID=gene-CYJ00_RS07985;Name=CYJ00_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07985;old_locus_tag=CYJ00_007990
NZ_PJUS02000300.1	Protein Homology	CDS	7920	8492	.	+	0	ID=cds-WP_063278648.1;Parent=gene-CYJ00_RS07985;Dbxref=GenBank:WP_063278648.1;Name=WP_063278648.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728609.1;locus_tag=CYJ00_RS07985;product=RNA polymerase sigma factor;protein_id=WP_063278648.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	8564	8707	.	+	.	ID=gene-CYJ00_RS07990;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ00_RS07990;old_locus_tag=CYJ00_007995
NZ_PJUS02000300.1	Protein Homology	CDS	8564	8707	.	+	0	ID=cds-WP_075773636.1;Parent=gene-CYJ00_RS07990;Dbxref=GenBank:WP_075773636.1;Name=WP_075773636.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=CYJ00_RS07990;product=50S ribosomal protein L33;protein_id=WP_075773636.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	8725	8904	.	+	.	ID=gene-CYJ00_RS07995;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CYJ00_RS07995;old_locus_tag=CYJ00_008000
NZ_PJUS02000300.1	Protein Homology	CDS	8725	8904	.	+	0	ID=cds-WP_014614757.1;Parent=gene-CYJ00_RS07995;Dbxref=GenBank:WP_014614757.1;Name=WP_014614757.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=CYJ00_RS07995;product=preprotein translocase subunit SecE;protein_id=WP_014614757.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	8923	9471	.	+	.	ID=gene-CYJ00_RS08000;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CYJ00_RS08000;old_locus_tag=CYJ00_008005
NZ_PJUS02000300.1	Protein Homology	CDS	8923	9471	.	+	0	ID=cds-WP_014614756.1;Parent=gene-CYJ00_RS08000;Dbxref=GenBank:WP_014614756.1;Name=WP_014614756.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CYJ00_RS08000;product=transcription termination/antitermination protein NusG;protein_id=WP_014614756.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	9636	10058	.	+	.	ID=gene-CYJ00_RS08005;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CYJ00_RS08005;old_locus_tag=CYJ00_008010
NZ_PJUS02000300.1	Protein Homology	CDS	9636	10058	.	+	0	ID=cds-WP_014614755.1;Parent=gene-CYJ00_RS08005;Dbxref=GenBank:WP_014614755.1;Name=WP_014614755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CYJ00_RS08005;product=50S ribosomal protein L11;protein_id=WP_014614755.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	10250	10945	.	+	.	ID=gene-CYJ00_RS08010;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08010;old_locus_tag=CYJ00_008015
NZ_PJUS02000300.1	Protein Homology	CDS	10250	10945	.	+	0	ID=cds-WP_014614754.1;Parent=gene-CYJ00_RS08010;Dbxref=GenBank:WP_014614754.1;Name=WP_014614754.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CYJ00_RS08010;product=50S ribosomal protein L1;protein_id=WP_014614754.1;transl_table=11
NZ_PJUS02000300.1	cmsearch	sequence_feature	11043	11183	.	+	.	ID=id-NZ_PJUS02000300.1:11043..11183;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000300.1	RefSeq	gene	11233	11733	.	+	.	ID=gene-CYJ00_RS08015;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS08015;old_locus_tag=CYJ00_008020
NZ_PJUS02000300.1	Protein Homology	CDS	11233	11733	.	+	0	ID=cds-WP_014614753.1;Parent=gene-CYJ00_RS08015;Dbxref=GenBank:WP_014614753.1;Name=WP_014614753.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=CYJ00_RS08015;product=50S ribosomal protein L10;protein_id=WP_014614753.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	11774	12139	.	+	.	ID=gene-CYJ00_RS08020;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CYJ00_RS08020;old_locus_tag=CYJ00_008025
NZ_PJUS02000300.1	Protein Homology	CDS	11774	12139	.	+	0	ID=cds-WP_014614752.1;Parent=gene-CYJ00_RS08020;Dbxref=GenBank:WP_014614752.1;Name=WP_014614752.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CYJ00_RS08020;product=50S ribosomal protein L7/L12;protein_id=WP_014614752.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	12217	12825	.	+	.	ID=gene-CYJ00_RS08025;Name=CYJ00_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08025;old_locus_tag=CYJ00_008030
NZ_PJUS02000300.1	Protein Homology	CDS	12217	12825	.	+	0	ID=cds-WP_014614751.1;Parent=gene-CYJ00_RS08025;Dbxref=GenBank:WP_014614751.1;Name=WP_014614751.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614751.1;locus_tag=CYJ00_RS08025;product=class I SAM-dependent methyltransferase;protein_id=WP_014614751.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	13038	16592	.	+	.	ID=gene-CYJ00_RS08030;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08030;old_locus_tag=CYJ00_008035
NZ_PJUS02000300.1	Protein Homology	CDS	13038	16592	.	+	0	ID=cds-WP_014614750.1;Parent=gene-CYJ00_RS08030;Dbxref=GenBank:WP_014614750.1;Name=WP_014614750.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614750.1;locus_tag=CYJ00_RS08030;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_014614750.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	16827	20447	.	+	.	ID=gene-CYJ00_RS08035;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CYJ00_RS08035;old_locus_tag=CYJ00_008040
NZ_PJUS02000300.1	Protein Homology	CDS	16827	20447	.	+	0	ID=cds-WP_014614749.1;Parent=gene-CYJ00_RS08035;Dbxref=GenBank:WP_014614749.1;Name=WP_014614749.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=CYJ00_RS08035;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_014614749.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	20625	20879	.	+	.	ID=gene-CYJ00_RS08040;Name=CYJ00_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08040;old_locus_tag=CYJ00_008045
NZ_PJUS02000300.1	Protein Homology	CDS	20625	20879	.	+	0	ID=cds-WP_014614748.1;Parent=gene-CYJ00_RS08040;Dbxref=GenBank:WP_014614748.1;Name=WP_014614748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=CYJ00_RS08040;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_014614748.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	20975	21388	.	+	.	ID=gene-CYJ00_RS08045;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CYJ00_RS08045;old_locus_tag=CYJ00_008050
NZ_PJUS02000300.1	Protein Homology	CDS	20975	21388	.	+	0	ID=cds-WP_014614747.1;Parent=gene-CYJ00_RS08045;Dbxref=GenBank:WP_014614747.1;Name=WP_014614747.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=CYJ00_RS08045;product=30S ribosomal protein S12;protein_id=WP_014614747.1;transl_table=11
NZ_PJUS02000300.1	RefSeq	gene	21469	21939	.	+	.	ID=gene-CYJ00_RS08050;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CYJ00_RS08050;old_locus_tag=CYJ00_008055
NZ_PJUS02000300.1	Protein Homology	CDS	21469	21939	.	+	0	ID=cds-WP_014614746.1;Parent=gene-CYJ00_RS08050;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CYJ00_RS08050;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11
##sequence-region NZ_PJUS02000370.1 1 437
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000370.1	RefSeq	region	1	437	.	+	.	ID=NZ_PJUS02000370.1:1..437;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000152.1 1 472
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000152.1	RefSeq	region	1	472	.	+	.	ID=NZ_PJUS02000152.1:1..472;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000152.1	RefSeq	gene	1	225	.	+	.	ID=gene-CYJ00_RS04265;Name=CYJ00_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04265;old_locus_tag=CYJ00_004270;partial=true;start_range=.,1
NZ_PJUS02000152.1	Protein Homology	CDS	1	225	.	+	0	ID=cds-WP_101458069.1;Parent=gene-CYJ00_RS04265;Dbxref=GenBank:WP_101458069.1;Name=WP_101458069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=CYJ00_RS04265;partial=true;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_101458069.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000270.1 1 380
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000270.1	RefSeq	region	1	380	.	+	.	ID=NZ_PJUS02000270.1:1..380;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000007.1 1 395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000007.1	RefSeq	region	1	395	.	+	.	ID=NZ_PJUS02000007.1:1..395;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000007.1	RefSeq	pseudogene	1	214	.	-	.	ID=gene-CYJ00_RS00245;Name=CYJ00_RS00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS00245;old_locus_tag=CYJ00_000245;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000007.1	Protein Homology	CDS	1	214	.	-	0	ID=cds-CYJ00_RS00245;Parent=gene-CYJ00_RS00245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612812.1;locus_tag=CYJ00_RS00245;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000225.1 1 370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000225.1	RefSeq	region	1	370	.	+	.	ID=NZ_PJUS02000225.1:1..370;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000225.1	RefSeq	gene	20	370	.	-	.	ID=gene-CYJ00_RS06245;Name=CYJ00_RS06245;end_range=370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06245;old_locus_tag=CYJ00_006250;partial=true
NZ_PJUS02000225.1	Protein Homology	CDS	20	370	.	-	0	ID=cds-WP_101458070.1;Parent=gene-CYJ00_RS06245;Dbxref=GenBank:WP_101458070.1;Name=WP_101458070.1;end_range=370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613354.1;locus_tag=CYJ00_RS06245;partial=true;product=YwpF family protein;protein_id=WP_101458070.1;transl_table=11
##sequence-region NZ_PJUS02000230.1 1 349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000230.1	RefSeq	region	1	349	.	+	.	ID=NZ_PJUS02000230.1:1..349;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000230.1	RefSeq	pseudogene	1	349	.	-	.	ID=gene-CYJ00_RS06360;Name=CYJ00_RS06360;end_range=349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06360;old_locus_tag=CYJ00_006365;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000230.1	Protein Homology	CDS	1	349	.	-	2	ID=cds-CYJ00_RS06360;Parent=gene-CYJ00_RS06360;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1;locus_tag=CYJ00_RS06360;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000241.1 1 11004
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000241.1	RefSeq	region	1	11004	.	+	.	ID=NZ_PJUS02000241.1:1..11004;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000241.1	RefSeq	gene	553	1485	.	-	.	ID=gene-CYJ00_RS06650;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06650;old_locus_tag=CYJ00_006655
NZ_PJUS02000241.1	Protein Homology	CDS	553	1485	.	-	0	ID=cds-WP_014614494.1;Parent=gene-CYJ00_RS06650;Dbxref=GenBank:WP_014614494.1;Name=WP_014614494.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614494.1;locus_tag=CYJ00_RS06650;product=thioredoxin-disulfide reductase;protein_id=WP_014614494.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	1548	2987	.	-	.	ID=gene-CYJ00_RS06655;Name=CYJ00_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06655;old_locus_tag=CYJ00_006660
NZ_PJUS02000241.1	Protein Homology	CDS	1548	2987	.	-	0	ID=cds-WP_101457748.1;Parent=gene-CYJ00_RS06655;Dbxref=GenBank:WP_101457748.1;Name=WP_101457748.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=CYJ00_RS06655;product=tetratricopeptide repeat protein;protein_id=WP_101457748.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	pseudogene	3022	3417	.	-	.	ID=gene-CYJ00_RS06660;Name=CYJ00_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS06660;old_locus_tag=CYJ00_006665;partial=true;pseudo=true;start_range=.,3022
NZ_PJUS02000241.1	Protein Homology	CDS	3022	3417	.	-	0	ID=cds-CYJ00_RS06660;Parent=gene-CYJ00_RS06660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=CYJ00_RS06660;partial=true;product=acyltransferase;pseudo=true;start_range=.,3022;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	3494	4330	.	-	.	ID=gene-CYJ00_RS06665;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CYJ00_RS06665;old_locus_tag=CYJ00_006670
NZ_PJUS02000241.1	Protein Homology	CDS	3494	4330	.	-	0	ID=cds-WP_014614497.1;Parent=gene-CYJ00_RS06665;Dbxref=GenBank:WP_014614497.1;Name=WP_014614497.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168497.1;locus_tag=CYJ00_RS06665;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014614497.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	4330	5271	.	-	.	ID=gene-CYJ00_RS06670;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=CYJ00_RS06670;old_locus_tag=CYJ00_006675
NZ_PJUS02000241.1	Protein Homology	CDS	4330	5271	.	-	0	ID=cds-WP_063278549.1;Parent=gene-CYJ00_RS06670;Dbxref=GenBank:WP_063278549.1;Name=WP_063278549.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614498.1;locus_tag=CYJ00_RS06670;product=HPr(Ser) kinase/phosphatase;protein_id=WP_063278549.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	5782	6132	.	-	.	ID=gene-CYJ00_RS06675;Name=CYJ00_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06675;old_locus_tag=CYJ00_006680
NZ_PJUS02000241.1	Protein Homology	CDS	5782	6132	.	-	0	ID=cds-WP_101457749.1;Parent=gene-CYJ00_RS06675;Dbxref=GenBank:WP_101457749.1;Name=WP_101457749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166115.1;locus_tag=CYJ00_RS06675;product=SHOCT-like domain-containing protein;protein_id=WP_101457749.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	6136	8979	.	-	.	ID=gene-CYJ00_RS06680;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06680;old_locus_tag=CYJ00_006685
NZ_PJUS02000241.1	Protein Homology	CDS	6136	8979	.	-	0	ID=cds-WP_014614500.1;Parent=gene-CYJ00_RS06680;Dbxref=GenBank:WP_014614500.1;Name=WP_014614500.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168500.1;locus_tag=CYJ00_RS06680;product=excinuclease ABC subunit UvrA;protein_id=WP_014614500.1;transl_table=11
NZ_PJUS02000241.1	RefSeq	gene	8985	10967	.	-	.	ID=gene-CYJ00_RS06685;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06685;old_locus_tag=CYJ00_006690
NZ_PJUS02000241.1	Protein Homology	CDS	8985	10967	.	-	0	ID=cds-WP_014614501.1;Parent=gene-CYJ00_RS06685;Dbxref=GenBank:WP_014614501.1;Name=WP_014614501.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=CYJ00_RS06685;product=excinuclease ABC subunit UvrB;protein_id=WP_014614501.1;transl_table=11
##sequence-region NZ_PJUS02000372.1 1 357
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000372.1	RefSeq	region	1	357	.	+	.	ID=NZ_PJUS02000372.1:1..357;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000372.1	RefSeq	pseudogene	18	314	.	-	.	ID=gene-CYJ00_RS11115;Name=CYJ00_RS11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11115;old_locus_tag=CYJ00_011120;partial=true;pseudo=true;start_range=.,18
NZ_PJUS02000372.1	Protein Homology	CDS	18	314	.	-	0	ID=cds-CYJ00_RS11115;Parent=gene-CYJ00_RS11115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613956.1;locus_tag=CYJ00_RS11115;partial=true;product=S1-like domain-containing RNA-binding protein;pseudo=true;start_range=.,18;transl_table=11
##sequence-region NZ_PJUS02000384.1 1 417
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000384.1	RefSeq	region	1	417	.	+	.	ID=NZ_PJUS02000384.1:1..417;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000385.1 1 381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000385.1	RefSeq	region	1	381	.	+	.	ID=NZ_PJUS02000385.1:1..381;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000386.1 1 12856
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000386.1	RefSeq	region	1	12856	.	+	.	ID=NZ_PJUS02000386.1:1..12856;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000386.1	RefSeq	gene	772	1239	.	-	.	ID=gene-CYJ00_RS11365;Name=CYJ00_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11365;old_locus_tag=CYJ00_011370
NZ_PJUS02000386.1	Protein Homology	CDS	772	1239	.	-	0	ID=cds-WP_015729545.1;Parent=gene-CYJ00_RS11365;Dbxref=GenBank:WP_015729545.1;Name=WP_015729545.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729545.1;locus_tag=CYJ00_RS11365;product=helical membrane plugin domain-containing protein;protein_id=WP_015729545.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	1239	4175	.	-	.	ID=gene-CYJ00_RS11370;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CYJ00_RS11370;old_locus_tag=CYJ00_011375
NZ_PJUS02000386.1	Protein Homology	CDS	1239	4175	.	-	0	ID=cds-WP_101457750.1;Parent=gene-CYJ00_RS11370;Dbxref=GenBank:WP_101457750.1;Name=WP_101457750.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=CYJ00_RS11370;product=formate dehydrogenase subunit alpha;protein_id=WP_101457750.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	4372	5013	.	-	.	ID=gene-CYJ00_RS11375;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CYJ00_RS11375;old_locus_tag=CYJ00_011380
NZ_PJUS02000386.1	Protein Homology	CDS	4372	5013	.	-	0	ID=cds-WP_014613153.1;Parent=gene-CYJ00_RS11375;Dbxref=GenBank:WP_014613153.1;Name=WP_014613153.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=CYJ00_RS11375;product=pyroglutamyl-peptidase I;protein_id=WP_014613153.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	5038	5964	.	-	.	ID=gene-CYJ00_RS11380;Name=CYJ00_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11380;old_locus_tag=CYJ00_011385
NZ_PJUS02000386.1	Protein Homology	CDS	5038	5964	.	-	0	ID=cds-WP_037542383.1;Parent=gene-CYJ00_RS11380;Dbxref=GenBank:WP_037542383.1;Name=WP_037542383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167169.1;locus_tag=CYJ00_RS11380;product=DUF979 domain-containing protein;protein_id=WP_037542383.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	5945	6652	.	-	.	ID=gene-CYJ00_RS11385;Name=CYJ00_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11385;old_locus_tag=CYJ00_011390
NZ_PJUS02000386.1	Protein Homology	CDS	5945	6652	.	-	0	ID=cds-WP_014613152.1;Parent=gene-CYJ00_RS11385;Dbxref=GenBank:WP_014613152.1;Name=WP_014613152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729548.1;locus_tag=CYJ00_RS11385;product=DUF969 domain-containing protein;protein_id=WP_014613152.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	6882	7835	.	-	.	ID=gene-CYJ00_RS11390;Name=CYJ00_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11390;old_locus_tag=CYJ00_011395
NZ_PJUS02000386.1	Protein Homology	CDS	6882	7835	.	-	0	ID=cds-WP_014613151.1;Parent=gene-CYJ00_RS11390;Dbxref=GenBank:WP_014613151.1;Name=WP_014613151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613151.1;locus_tag=CYJ00_RS11390;product=LCP family glycopolymer transferase;protein_id=WP_014613151.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	7963	8757	.	-	.	ID=gene-CYJ00_RS11395;Name=CYJ00_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11395;old_locus_tag=CYJ00_011400
NZ_PJUS02000386.1	Protein Homology	CDS	7963	8757	.	-	0	ID=cds-WP_096533477.1;Parent=gene-CYJ00_RS11395;Dbxref=GenBank:WP_096533477.1;Name=WP_096533477.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613150.1;locus_tag=CYJ00_RS11395;product=inositol monophosphatase family protein;protein_id=WP_096533477.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	9210	9911	.	+	.	ID=gene-CYJ00_RS11400;Name=CYJ00_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11400;old_locus_tag=CYJ00_011405
NZ_PJUS02000386.1	Protein Homology	CDS	9210	9911	.	+	0	ID=cds-WP_014613149.1;Parent=gene-CYJ00_RS11400;Dbxref=GenBank:WP_014613149.1;Name=WP_014613149.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=CYJ00_RS11400;product=helix-turn-helix transcriptional regulator;protein_id=WP_014613149.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	9965	10696	.	-	.	ID=gene-CYJ00_RS11405;Name=CYJ00_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11405;old_locus_tag=CYJ00_011410
NZ_PJUS02000386.1	Protein Homology	CDS	9965	10696	.	-	0	ID=cds-WP_099986787.1;Parent=gene-CYJ00_RS11405;Dbxref=GenBank:WP_099986787.1;Name=WP_099986787.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613148.1;locus_tag=CYJ00_RS11405;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_099986787.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	10840	11193	.	+	.	ID=gene-CYJ00_RS11410;Name=CYJ00_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11410;old_locus_tag=CYJ00_011415
NZ_PJUS02000386.1	Protein Homology	CDS	10840	11193	.	+	0	ID=cds-WP_031253762.1;Parent=gene-CYJ00_RS11410;Dbxref=GenBank:WP_031253762.1;Name=WP_031253762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613147.1;locus_tag=CYJ00_RS11410;product=hypothetical protein;protein_id=WP_031253762.1;transl_table=11
NZ_PJUS02000386.1	RefSeq	gene	11389	12777	.	-	.	ID=gene-CYJ00_RS11415;Name=CYJ00_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11415;old_locus_tag=CYJ00_011420
NZ_PJUS02000386.1	Protein Homology	CDS	11389	12777	.	-	0	ID=cds-WP_014613146.1;Parent=gene-CYJ00_RS11415;Dbxref=GenBank:WP_014613146.1;Name=WP_014613146.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=CYJ00_RS11415;product=amino acid permease;protein_id=WP_014613146.1;transl_table=11
##sequence-region NZ_PJUS02000286.1 1 362
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000286.1	RefSeq	region	1	362	.	+	.	ID=NZ_PJUS02000286.1:1..362;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000286.1	RefSeq	gene	42	173	.	+	.	ID=gene-CYJ00_RS13805;Name=CYJ00_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13805
NZ_PJUS02000286.1	Protein Homology	CDS	42	173	.	+	0	ID=cds-WP_257975668.1;Parent=gene-CYJ00_RS13805;Dbxref=GenBank:WP_257975668.1;Name=WP_257975668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167924.1;locus_tag=CYJ00_RS13805;product=hypothetical protein;protein_id=WP_257975668.1;transl_table=11
##sequence-region NZ_PJUS02000146.1 1 251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000146.1	RefSeq	region	1	251	.	+	.	ID=NZ_PJUS02000146.1:1..251;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000146.1	RefSeq	gene	1	251	.	-	.	ID=gene-CYJ00_RS03990;Name=CYJ00_RS03990;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03990;old_locus_tag=CYJ00_003995;partial=true;start_range=.,1
NZ_PJUS02000146.1	Protein Homology	CDS	1	251	.	-	2	ID=cds-WP_198597675.1;Parent=gene-CYJ00_RS03990;Dbxref=GenBank:WP_198597675.1;Name=WP_198597675.1;Ontology_term=GO:0015074;end_range=251,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_340995027.1;locus_tag=CYJ00_RS03990;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_198597675.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000103.1 1 423
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000103.1	RefSeq	region	1	423	.	+	.	ID=NZ_PJUS02000103.1:1..423;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000103.1	RefSeq	pseudogene	198	278	.	-	.	ID=gene-CYJ00_RS02865;Name=CYJ00_RS02865;end_range=278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS02865;old_locus_tag=CYJ00_002865;partial=true;pseudo=true
NZ_PJUS02000103.1	Protein Homology	CDS	198	278	.	-	0	ID=cds-CYJ00_RS02865;Parent=gene-CYJ00_RS02865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105988.1;locus_tag=CYJ00_RS02865;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000038.1 1 237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000038.1	RefSeq	region	1	237	.	+	.	ID=NZ_PJUS02000038.1:1..237;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000038.1	RefSeq	pseudogene	1	237	.	-	.	ID=gene-CYJ00_RS01115;Name=CYJ00_RS01115;end_range=237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS01115;old_locus_tag=CYJ00_001115;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000038.1	Protein Homology	CDS	1	237	.	-	2	ID=cds-CYJ00_RS01115;Parent=gene-CYJ00_RS01115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS01115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000010.1 1 399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000010.1	RefSeq	region	1	399	.	+	.	ID=NZ_PJUS02000010.1:1..399;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000010.1	RefSeq	gene	104	399	.	-	.	ID=gene-CYJ00_RS00370;Name=CYJ00_RS00370;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00370;old_locus_tag=CYJ00_000370;partial=true
NZ_PJUS02000010.1	Protein Homology	CDS	104	399	.	-	2	ID=cds-WP_274539967.1;Parent=gene-CYJ00_RS00370;Dbxref=GenBank:WP_274539967.1;Name=WP_274539967.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;end_range=399,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=CYJ00_RS00370;partial=true;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_274539967.1;transl_table=11
##sequence-region NZ_PJUS02000120.1 1 279
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000120.1	RefSeq	region	1	279	.	+	.	ID=NZ_PJUS02000120.1:1..279;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000120.1	RefSeq	gene	34	279	.	-	.	ID=gene-CYJ00_RS03440;Name=CYJ00_RS03440;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03440;old_locus_tag=CYJ00_003445;partial=true
NZ_PJUS02000120.1	Protein Homology	CDS	34	279	.	-	0	ID=cds-WP_101458073.1;Parent=gene-CYJ00_RS03440;Dbxref=GenBank:WP_101458073.1;Name=WP_101458073.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729310.1;locus_tag=CYJ00_RS03440;partial=true;product=hypothetical protein;protein_id=WP_101458073.1;transl_table=11
##sequence-region NZ_PJUS02000044.1 1 464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000044.1	RefSeq	region	1	464	.	+	.	ID=NZ_PJUS02000044.1:1..464;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000161.1 1 11968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000161.1	RefSeq	region	1	11968	.	+	.	ID=NZ_PJUS02000161.1:1..11968;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000161.1	RefSeq	gene	155	1186	.	+	.	ID=gene-CYJ00_RS04525;Name=CYJ00_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04525;old_locus_tag=CYJ00_004530
NZ_PJUS02000161.1	Protein Homology	CDS	155	1186	.	+	0	ID=cds-WP_014613028.1;Parent=gene-CYJ00_RS04525;Dbxref=GenBank:WP_014613028.1;Name=WP_014613028.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=CYJ00_RS04525;product=PTS sugar transporter subunit IIC;protein_id=WP_014613028.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	1201	1878	.	+	.	ID=gene-CYJ00_RS04530;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04530;old_locus_tag=CYJ00_004535
NZ_PJUS02000161.1	Protein Homology	CDS	1201	1878	.	+	0	ID=cds-WP_020219491.1;Parent=gene-CYJ00_RS04530;Dbxref=GenBank:WP_020219491.1;Name=WP_020219491.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219491.1;locus_tag=CYJ00_RS04530;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_020219491.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	1894	2793	.	+	.	ID=gene-CYJ00_RS04535;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04535;old_locus_tag=CYJ00_004540
NZ_PJUS02000161.1	Protein Homology	CDS	1894	2793	.	+	0	ID=cds-WP_020219490.1;Parent=gene-CYJ00_RS04535;Dbxref=GenBank:WP_020219490.1;Name=WP_020219490.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=CYJ00_RS04535;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_020219490.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	3179	3436	.	-	.	ID=gene-CYJ00_RS04540;Name=CYJ00_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04540;old_locus_tag=CYJ00_004545
NZ_PJUS02000161.1	Protein Homology	CDS	3179	3436	.	-	0	ID=cds-WP_014613025.1;Parent=gene-CYJ00_RS04540;Dbxref=GenBank:WP_014613025.1;Name=WP_014613025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613025.1;locus_tag=CYJ00_RS04540;product=hypothetical protein;protein_id=WP_014613025.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	pseudogene	3754	4494	.	-	.	ID=gene-CYJ00_RS04545;Name=CYJ00_RS04545;end_range=4494,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS04545;old_locus_tag=CYJ00_004550;partial=true;pseudo=true
NZ_PJUS02000161.1	Protein Homology	CDS	3754	4494	.	-	0	ID=cds-CYJ00_RS04545;Parent=gene-CYJ00_RS04545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042626,GO:0140359;end_range=4494,.;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180268.1;locus_tag=CYJ00_RS04545;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	4695	5354	.	-	.	ID=gene-CYJ00_RS04550;Name=CYJ00_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04550;old_locus_tag=CYJ00_004555
NZ_PJUS02000161.1	Protein Homology	CDS	4695	5354	.	-	0	ID=cds-WP_014613014.1;Parent=gene-CYJ00_RS04550;Dbxref=GenBank:WP_014613014.1;Name=WP_014613014.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169536.1;locus_tag=CYJ00_RS04550;product=SDR family oxidoreductase;protein_id=WP_014613014.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	5956	6717	.	-	.	ID=gene-CYJ00_RS04555;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04555;old_locus_tag=CYJ00_004560
NZ_PJUS02000161.1	Protein Homology	CDS	5956	6717	.	-	0	ID=cds-WP_014613012.1;Parent=gene-CYJ00_RS04555;Dbxref=GenBank:WP_014613012.1;Name=WP_014613012.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166512.1;locus_tag=CYJ00_RS04555;product=pyruvate formate-lyase-activating protein;protein_id=WP_014613012.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	6776	9025	.	-	.	ID=gene-CYJ00_RS04560;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04560;old_locus_tag=CYJ00_004565
NZ_PJUS02000161.1	Protein Homology	CDS	6776	9025	.	-	0	ID=cds-WP_101457751.1;Parent=gene-CYJ00_RS04560;Dbxref=GenBank:WP_101457751.1;Name=WP_101457751.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169534.1;locus_tag=CYJ00_RS04560;product=formate C-acetyltransferase;protein_id=WP_101457751.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	9322	10392	.	-	.	ID=gene-CYJ00_RS04565;Name=CYJ00_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04565;old_locus_tag=CYJ00_004570
NZ_PJUS02000161.1	Protein Homology	CDS	9322	10392	.	-	0	ID=cds-WP_014613010.1;Parent=gene-CYJ00_RS04565;Dbxref=GenBank:WP_014613010.1;Name=WP_014613010.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219481.1;locus_tag=CYJ00_RS04565;product=PTS sugar transporter subunit IIC;protein_id=WP_014613010.1;transl_table=11
NZ_PJUS02000161.1	RefSeq	gene	10713	11792	.	-	.	ID=gene-CYJ00_RS04570;Name=CYJ00_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04570;old_locus_tag=CYJ00_004575
NZ_PJUS02000161.1	Protein Homology	CDS	10713	11792	.	-	0	ID=cds-WP_015729615.1;Parent=gene-CYJ00_RS04570;Dbxref=GenBank:WP_015729615.1;Name=WP_015729615.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613009.1;locus_tag=CYJ00_RS04570;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_015729615.1;transl_table=11
##sequence-region NZ_PJUS02000015.1 1 382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000015.1	RefSeq	region	1	382	.	+	.	ID=NZ_PJUS02000015.1:1..382;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000129.1 1 380
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000129.1	RefSeq	region	1	380	.	+	.	ID=NZ_PJUS02000129.1:1..380;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000129.1	RefSeq	gene	1	372	.	-	.	ID=gene-CYJ00_RS03625;Name=CYJ00_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03625;old_locus_tag=CYJ00_003630;partial=true;start_range=.,1
NZ_PJUS02000129.1	Protein Homology	CDS	1	372	.	-	0	ID=cds-WP_133158325.1;Parent=gene-CYJ00_RS03625;Dbxref=GenBank:WP_133158325.1;Name=WP_133158325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500456.1;locus_tag=CYJ00_RS03625;partial=true;product=DUF1828 domain-containing protein;protein_id=WP_133158325.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000211.1 1 361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000211.1	RefSeq	region	1	361	.	+	.	ID=NZ_PJUS02000211.1:1..361;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000211.1	RefSeq	gene	1	103	.	-	.	ID=gene-CYJ00_RS13800;Name=CYJ00_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13800;partial=true;start_range=.,1
NZ_PJUS02000211.1	Protein Homology	CDS	1	103	.	-	0	ID=cds-WP_341351418.1;Parent=gene-CYJ00_RS13800;Dbxref=GenBank:WP_341351418.1;Name=WP_341351418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131391.1;locus_tag=CYJ00_RS13800;partial=true;product=SAV1978 family virulence-associated passenger protein;protein_id=WP_341351418.1;start_range=.,1;transl_table=11
NZ_PJUS02000211.1	RefSeq	gene	106	361	.	-	.	ID=gene-CYJ00_RS13110;Name=CYJ00_RS13110;end_range=361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13110;old_locus_tag=CYJ00_005875;partial=true
NZ_PJUS02000211.1	GeneMarkS-2+	CDS	106	361	.	-	1	ID=cds-WP_157939003.1;Parent=gene-CYJ00_RS13110;Dbxref=GenBank:WP_157939003.1;Name=WP_157939003.1;end_range=361,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13110;partial=true;product=hypothetical protein;protein_id=WP_157939003.1;transl_table=11
##sequence-region NZ_PJUS02000235.1 1 210
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000235.1	RefSeq	region	1	210	.	+	.	ID=NZ_PJUS02000235.1:1..210;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000235.1	RefSeq	gene	39	210	.	+	.	ID=gene-CYJ00_RS13930;Name=CYJ00_RS13930;end_range=210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13930;partial=true
NZ_PJUS02000235.1	Protein Homology	CDS	39	210	.	+	0	ID=cds-WP_206748195.1;Parent=gene-CYJ00_RS13930;Dbxref=GenBank:WP_206748195.1;Name=WP_206748195.1;end_range=210,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ00_RS13930;partial=true;product=YPDG domain-containing protein;protein_id=WP_206748195.1;transl_table=11
##sequence-region NZ_PJUS02000138.1 1 411
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000138.1	RefSeq	region	1	411	.	+	.	ID=NZ_PJUS02000138.1:1..411;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000138.1	RefSeq	gene	1	411	.	+	.	ID=gene-CYJ00_RS03755;Name=CYJ00_RS03755;end_range=411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03755;old_locus_tag=CYJ00_003760;partial=true;start_range=.,1
NZ_PJUS02000138.1	Protein Homology	CDS	1	411	.	+	0	ID=cds-WP_157939000.1;Parent=gene-CYJ00_RS03755;Dbxref=GenBank:WP_157939000.1;Name=WP_157939000.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=411,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500917.1;locus_tag=CYJ00_RS03755;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_157939000.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000163.1 1 284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000163.1	RefSeq	region	1	284	.	+	.	ID=NZ_PJUS02000163.1:1..284;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000163.1	RefSeq	gene	1	284	.	-	.	ID=gene-CYJ00_RS04600;Name=CYJ00_RS04600;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04600;old_locus_tag=CYJ00_004605;partial=true;start_range=.,1
NZ_PJUS02000163.1	Protein Homology	CDS	1	284	.	-	0	ID=cds-WP_101458075.1;Parent=gene-CYJ00_RS04600;Dbxref=GenBank:WP_101458075.1;Name=WP_101458075.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS04600;partial=true;product=hypothetical protein;protein_id=WP_101458075.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000309.1 1 393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000309.1	RefSeq	region	1	393	.	+	.	ID=NZ_PJUS02000309.1:1..393;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000128.1 1 10007
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000128.1	RefSeq	region	1	10007	.	+	.	ID=NZ_PJUS02000128.1:1..10007;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000128.1	RefSeq	gene	127	1431	.	+	.	ID=gene-CYJ00_RS03585;Name=CYJ00_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03585;old_locus_tag=CYJ00_003590
NZ_PJUS02000128.1	Protein Homology	CDS	127	1431	.	+	0	ID=cds-WP_014613130.1;Parent=gene-CYJ00_RS03585;Dbxref=GenBank:WP_014613130.1;Name=WP_014613130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=CYJ00_RS03585;product=YjiH family protein;protein_id=WP_014613130.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	1453	3117	.	+	.	ID=gene-CYJ00_RS03590;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CYJ00_RS03590;old_locus_tag=CYJ00_003595
NZ_PJUS02000128.1	Protein Homology	CDS	1453	3117	.	+	0	ID=cds-WP_181393513.1;Parent=gene-CYJ00_RS03590;Dbxref=GenBank:WP_181393513.1;Name=WP_181393513.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613131.1;locus_tag=CYJ00_RS03590;product=urocanate hydratase;protein_id=WP_181393513.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	3114	4355	.	+	.	ID=gene-CYJ00_RS03595;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CYJ00_RS03595;old_locus_tag=CYJ00_003600
NZ_PJUS02000128.1	Protein Homology	CDS	3114	4355	.	+	0	ID=cds-WP_020219781.1;Parent=gene-CYJ00_RS03595;Dbxref=GenBank:WP_020219781.1;Name=WP_020219781.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729560.1;locus_tag=CYJ00_RS03595;product=imidazolonepropionase;protein_id=WP_020219781.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	4890	6080	.	+	.	ID=gene-CYJ00_RS03600;Name=CYJ00_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03600;old_locus_tag=CYJ00_003605
NZ_PJUS02000128.1	Protein Homology	CDS	4890	6080	.	+	0	ID=cds-WP_241956937.1;Parent=gene-CYJ00_RS03600;Dbxref=GenBank:WP_241956937.1;Name=WP_241956937.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167149.1;locus_tag=CYJ00_RS03600;product=SulP family inorganic anion transporter;protein_id=WP_241956937.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	6070	7206	.	+	.	ID=gene-CYJ00_RS03605;Name=CYJ00_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03605;old_locus_tag=CYJ00_003610
NZ_PJUS02000128.1	Protein Homology	CDS	6070	7206	.	+	0	ID=cds-WP_014613134.1;Parent=gene-CYJ00_RS03605;Dbxref=GenBank:WP_014613134.1;Name=WP_014613134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613134.1;locus_tag=CYJ00_RS03605;product=M20 peptidase aminoacylase family protein;protein_id=WP_014613134.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	7369	8670	.	+	.	ID=gene-CYJ00_RS03610;Name=CYJ00_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03610;old_locus_tag=CYJ00_003615
NZ_PJUS02000128.1	Protein Homology	CDS	7369	8670	.	+	0	ID=cds-WP_101457252.1;Parent=gene-CYJ00_RS03610;Dbxref=GenBank:WP_101457252.1;Name=WP_101457252.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613135.1;locus_tag=CYJ00_RS03610;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_101457252.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	8775	9284	.	+	.	ID=gene-CYJ00_RS03615;Name=CYJ00_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03615;old_locus_tag=CYJ00_003620
NZ_PJUS02000128.1	Protein Homology	CDS	8775	9284	.	+	0	ID=cds-WP_172635627.1;Parent=gene-CYJ00_RS03615;Dbxref=GenBank:WP_172635627.1;Name=WP_172635627.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219778.1;locus_tag=CYJ00_RS03615;product=SRPBCC family protein;protein_id=WP_172635627.1;transl_table=11
NZ_PJUS02000128.1	RefSeq	gene	9400	9927	.	-	.	ID=gene-CYJ00_RS03620;Name=CYJ00_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03620;old_locus_tag=CYJ00_003625
NZ_PJUS02000128.1	Protein Homology	CDS	9400	9927	.	-	0	ID=cds-WP_020219777.1;Parent=gene-CYJ00_RS03620;Dbxref=GenBank:WP_020219777.1;Name=WP_020219777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167153.1;locus_tag=CYJ00_RS03620;product=hypothetical protein;protein_id=WP_020219777.1;transl_table=11
##sequence-region NZ_PJUS02000259.1 1 338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000259.1	RefSeq	region	1	338	.	+	.	ID=NZ_PJUS02000259.1:1..338;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000259.1	RefSeq	gene	1	163	.	+	.	ID=gene-CYJ00_RS07065;Name=CYJ00_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07065;old_locus_tag=CYJ00_007070;partial=true;start_range=.,1
NZ_PJUS02000259.1	Protein Homology	CDS	1	163	.	+	1	ID=cds-WP_133158337.1;Parent=gene-CYJ00_RS07065;Dbxref=GenBank:WP_133158337.1;Name=WP_133158337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499608.1;locus_tag=CYJ00_RS07065;partial=true;product=DUF1507 family protein;protein_id=WP_133158337.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000159.1 1 462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000159.1	RefSeq	region	1	462	.	+	.	ID=NZ_PJUS02000159.1:1..462;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000159.1	RefSeq	gene	144	293	.	+	.	ID=gene-CYJ00_RS04465;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04465;old_locus_tag=CYJ00_004470
NZ_PJUS02000159.1	Protein Homology	CDS	144	293	.	+	0	ID=cds-WP_014613994.1;Parent=gene-CYJ00_RS04465;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ00_RS04465;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11
##sequence-region NZ_PJUS02000145.1 1 349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000145.1	RefSeq	region	1	349	.	+	.	ID=NZ_PJUS02000145.1:1..349;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000145.1	RefSeq	gene	72	302	.	+	.	ID=gene-CYJ00_RS03985;Name=CYJ00_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03985;old_locus_tag=CYJ00_003990
NZ_PJUS02000145.1	Protein Homology	CDS	72	302	.	+	0	ID=cds-WP_014613350.1;Parent=gene-CYJ00_RS03985;Dbxref=GenBank:WP_014613350.1;Name=WP_014613350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613350.1;locus_tag=CYJ00_RS03985;product=DUF1146 family protein;protein_id=WP_014613350.1;transl_table=11
##sequence-region NZ_PJUS02000354.1 1 203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000354.1	RefSeq	region	1	203	.	+	.	ID=NZ_PJUS02000354.1:1..203;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000354.1	RefSeq	pseudogene	1	203	.	-	.	ID=gene-CYJ00_RS10730;Name=CYJ00_RS10730;end_range=203,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10730;old_locus_tag=CYJ00_010735;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000354.1	Protein Homology	CDS	1	203	.	-	2	ID=cds-CYJ00_RS10730;Parent=gene-CYJ00_RS10730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS10730;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000381.1 1 391
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000381.1	RefSeq	region	1	391	.	+	.	ID=NZ_PJUS02000381.1:1..391;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000381.1	RefSeq	gene	1	391	.	-	.	ID=gene-CYJ00_RS11310;Name=udk;end_range=391,.;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CYJ00_RS11310;old_locus_tag=CYJ00_011315;partial=true;start_range=.,1
NZ_PJUS02000381.1	Protein Homology	CDS	1	391	.	-	0	ID=cds-WP_101458076.1;Parent=gene-CYJ00_RS11310;Dbxref=GenBank:WP_101458076.1;Name=WP_101458076.1;Ontology_term=GO:0004849;end_range=391,.;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500224.1;locus_tag=CYJ00_RS11310;partial=true;product=uridine kinase;protein_id=WP_101458076.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000002.1 1 14219
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000002.1	RefSeq	region	1	14219	.	+	.	ID=NZ_PJUS02000002.1:1..14219;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000002.1	RefSeq	gene	651	848	.	-	.	ID=gene-CYJ00_RS00040;Name=CYJ00_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00040;old_locus_tag=CYJ00_000040
NZ_PJUS02000002.1	Protein Homology	CDS	651	848	.	-	0	ID=cds-WP_101457754.1;Parent=gene-CYJ00_RS00040;Dbxref=GenBank:WP_101457754.1;Name=WP_101457754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728984.1;locus_tag=CYJ00_RS00040;product=hypothetical protein;protein_id=WP_101457754.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	pseudogene	1331	1513	.	-	.	ID=gene-CYJ00_RS00045;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=pseudogene;locus_tag=CYJ00_RS00045;old_locus_tag=CYJ00_000045;partial=true;pseudo=true;start_range=.,1331
NZ_PJUS02000002.1	Protein Homology	CDS	1331	1513	.	-	0	ID=cds-CYJ00_RS00045;Parent=gene-CYJ00_RS00045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614065.1;locus_tag=CYJ00_RS00045;partial=true;product=30S ribosome-binding factor RbfA;pseudo=true;start_range=.,1331;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	2259	2498	.	-	.	ID=gene-CYJ00_RS00050;Name=CYJ00_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00050;old_locus_tag=CYJ00_000050
NZ_PJUS02000002.1	Protein Homology	CDS	2259	2498	.	-	0	ID=cds-WP_014614066.1;Parent=gene-CYJ00_RS00050;Dbxref=GenBank:WP_014614066.1;Name=WP_014614066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614066.1;locus_tag=CYJ00_RS00050;product=hypothetical protein;protein_id=WP_014614066.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	2713	4851	.	-	.	ID=gene-CYJ00_RS00055;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00055;old_locus_tag=CYJ00_000055
NZ_PJUS02000002.1	Protein Homology	CDS	2713	4851	.	-	0	ID=cds-WP_015729051.1;Parent=gene-CYJ00_RS00055;Dbxref=GenBank:WP_015729051.1;Name=WP_015729051.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=CYJ00_RS00055;product=translation initiation factor IF-2;protein_id=WP_015729051.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	4868	5173	.	-	.	ID=gene-CYJ00_RS00060;Name=CYJ00_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00060;old_locus_tag=CYJ00_000060
NZ_PJUS02000002.1	Protein Homology	CDS	4868	5173	.	-	0	ID=cds-WP_014614068.1;Parent=gene-CYJ00_RS00060;Dbxref=GenBank:WP_014614068.1;Name=WP_014614068.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=CYJ00_RS00060;product=YlxQ family RNA-binding protein;protein_id=WP_014614068.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	5170	5457	.	-	.	ID=gene-CYJ00_RS00065;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=CYJ00_RS00065;old_locus_tag=CYJ00_000065
NZ_PJUS02000002.1	Protein Homology	CDS	5170	5457	.	-	0	ID=cds-WP_014614069.1;Parent=gene-CYJ00_RS00065;Dbxref=GenBank:WP_014614069.1;Name=WP_014614069.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=CYJ00_RS00065;product=RNase P modulator RnpM;protein_id=WP_014614069.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	5469	6647	.	-	.	ID=gene-CYJ00_RS00070;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00070;old_locus_tag=CYJ00_000070
NZ_PJUS02000002.1	Protein Homology	CDS	5469	6647	.	-	0	ID=cds-WP_015729050.1;Parent=gene-CYJ00_RS00070;Dbxref=GenBank:WP_015729050.1;Name=WP_015729050.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729050.1;locus_tag=CYJ00_RS00070;product=transcription termination factor NusA;protein_id=WP_015729050.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	6668	7135	.	-	.	ID=gene-CYJ00_RS00075;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CYJ00_RS00075;old_locus_tag=CYJ00_000075
NZ_PJUS02000002.1	Protein Homology	CDS	6668	7135	.	-	0	ID=cds-WP_014614071.1;Parent=gene-CYJ00_RS00075;Dbxref=GenBank:WP_014614071.1;Name=WP_014614071.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=CYJ00_RS00075;product=ribosome maturation factor RimP;protein_id=WP_014614071.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	7260	11567	.	-	.	ID=gene-CYJ00_RS00080;Name=CYJ00_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00080;old_locus_tag=CYJ00_000080
NZ_PJUS02000002.1	Protein Homology	CDS	7260	11567	.	-	0	ID=cds-WP_063284342.1;Parent=gene-CYJ00_RS00080;Dbxref=GenBank:WP_063284342.1;Name=WP_063284342.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729049.1;locus_tag=CYJ00_RS00080;product=PolC-type DNA polymerase III;protein_id=WP_063284342.1;transl_table=11
NZ_PJUS02000002.1	RefSeq	gene	12484	14187	.	-	.	ID=gene-CYJ00_RS00085;Name=CYJ00_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00085;old_locus_tag=CYJ00_000085
NZ_PJUS02000002.1	Protein Homology	CDS	12484	14187	.	-	0	ID=cds-WP_063284341.1;Parent=gene-CYJ00_RS00085;Dbxref=GenBank:WP_063284341.1;Name=WP_063284341.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275937.1;locus_tag=CYJ00_RS00085;product=proline--tRNA ligase;protein_id=WP_063284341.1;transl_table=11
##sequence-region NZ_PJUS02000059.1 1 373
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000059.1	RefSeq	region	1	373	.	+	.	ID=NZ_PJUS02000059.1:1..373;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000139.1 1 445
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000139.1	RefSeq	region	1	445	.	+	.	ID=NZ_PJUS02000139.1:1..445;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000139.1	RefSeq	pseudogene	129	445	.	-	.	ID=gene-CYJ00_RS03760;Name=CYJ00_RS03760;end_range=445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03760;old_locus_tag=CYJ00_003765;partial=true;pseudo=true
NZ_PJUS02000139.1	Protein Homology	CDS	129	445	.	-	2	ID=cds-CYJ00_RS03760;Parent=gene-CYJ00_RS03760;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728701.1;locus_tag=CYJ00_RS03760;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000391.1 1 287
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000391.1	RefSeq	region	1	287	.	+	.	ID=NZ_PJUS02000391.1:1..287;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000391.1	RefSeq	pseudogene	1	252	.	-	.	ID=gene-CYJ00_RS11540;Name=CYJ00_RS11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11540;old_locus_tag=CYJ00_011545;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000391.1	GeneMarkS-2+	CDS	1	252	.	-	0	ID=cds-CYJ00_RS11540;Parent=gene-CYJ00_RS11540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS11540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000420.1 1 350
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000420.1	RefSeq	region	1	350	.	+	.	ID=NZ_PJUS02000420.1:1..350;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000420.1	RefSeq	gene	76	213	.	+	.	ID=gene-CYJ00_RS13385;Name=CYJ00_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13385
NZ_PJUS02000420.1	Protein Homology	CDS	76	213	.	+	0	ID=cds-WP_014613651.1;Parent=gene-CYJ00_RS13385;Dbxref=GenBank:WP_014613651.1;Name=WP_014613651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613651.1;locus_tag=CYJ00_RS13385;product=hypothetical protein;protein_id=WP_014613651.1;transl_table=11
##sequence-region NZ_PJUS02000329.1 1 217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000329.1	RefSeq	region	1	217	.	+	.	ID=NZ_PJUS02000329.1:1..217;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000190.1 1 353
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000190.1	RefSeq	region	1	353	.	+	.	ID=NZ_PJUS02000190.1:1..353;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000190.1	RefSeq	pseudogene	1	353	.	-	.	ID=gene-CYJ00_RS05235;Name=CYJ00_RS05235;end_range=353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05235;old_locus_tag=CYJ00_005240;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000190.1	Protein Homology	CDS	1	353	.	-	1	ID=cds-CYJ00_RS05235;Parent=gene-CYJ00_RS05235;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=CYJ00_RS05235;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000327.1 1 9652
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000327.1	RefSeq	region	1	9652	.	+	.	ID=NZ_PJUS02000327.1:1..9652;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000327.1	RefSeq	gene	425	2323	.	-	.	ID=gene-CYJ00_RS08755;Name=CYJ00_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08755;old_locus_tag=CYJ00_008760
NZ_PJUS02000327.1	Protein Homology	CDS	425	2323	.	-	0	ID=cds-WP_101457755.1;Parent=gene-CYJ00_RS08755;Dbxref=GenBank:WP_101457755.1;Name=WP_101457755.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168551.1;locus_tag=CYJ00_RS08755;product=PTS fructose transporter subunit IIABC;protein_id=WP_101457755.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	2325	3248	.	-	.	ID=gene-CYJ00_RS08760;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08760;old_locus_tag=CYJ00_008765
NZ_PJUS02000327.1	Protein Homology	CDS	2325	3248	.	-	0	ID=cds-WP_096636585.1;Parent=gene-CYJ00_RS08760;Dbxref=GenBank:WP_096636585.1;Name=WP_096636585.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=CYJ00_RS08760;product=1-phosphofructokinase;protein_id=WP_096636585.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	3248	4000	.	-	.	ID=gene-CYJ00_RS08765;Name=CYJ00_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08765;old_locus_tag=CYJ00_008770
NZ_PJUS02000327.1	Protein Homology	CDS	3248	4000	.	-	0	ID=cds-WP_014614557.1;Parent=gene-CYJ00_RS08765;Dbxref=GenBank:WP_014614557.1;Name=WP_014614557.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614557.1;locus_tag=CYJ00_RS08765;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014614557.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	4262	4471	.	+	.	ID=gene-CYJ00_RS08770;Name=CYJ00_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08770;old_locus_tag=CYJ00_008775
NZ_PJUS02000327.1	Protein Homology	CDS	4262	4471	.	+	0	ID=cds-WP_101457756.1;Parent=gene-CYJ00_RS08770;Dbxref=GenBank:WP_101457756.1;Name=WP_101457756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614558.1;locus_tag=CYJ00_RS08770;product=DUF6007 family protein;protein_id=WP_101457756.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	4582	4785	.	+	.	ID=gene-CYJ00_RS08775;Name=CYJ00_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08775;old_locus_tag=CYJ00_008780
NZ_PJUS02000327.1	Protein Homology	CDS	4582	4785	.	+	0	ID=cds-WP_014614559.1;Parent=gene-CYJ00_RS08775;Dbxref=GenBank:WP_014614559.1;Name=WP_014614559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614559.1;locus_tag=CYJ00_RS08775;product=hypothetical protein;protein_id=WP_014614559.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	4831	5010	.	-	.	ID=gene-CYJ00_RS08780;Name=CYJ00_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08780;old_locus_tag=CYJ00_008785
NZ_PJUS02000327.1	Protein Homology	CDS	4831	5010	.	-	0	ID=cds-WP_015728727.1;Parent=gene-CYJ00_RS08780;Dbxref=GenBank:WP_015728727.1;Name=WP_015728727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166167.1;locus_tag=CYJ00_RS08780;product=VraH family peptide resistance protein;protein_id=WP_015728727.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	5159	5638	.	-	.	ID=gene-CYJ00_RS08785;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CYJ00_RS08785;old_locus_tag=CYJ00_008790
NZ_PJUS02000327.1	Protein Homology	CDS	5159	5638	.	-	0	ID=cds-WP_014614561.1;Parent=gene-CYJ00_RS08785;Dbxref=GenBank:WP_014614561.1;Name=WP_014614561.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614561.1;locus_tag=CYJ00_RS08785;product=Cys-tRNA(Pro) deacylase;protein_id=WP_014614561.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	5661	7985	.	-	.	ID=gene-CYJ00_RS08790;Name=CYJ00_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08790;old_locus_tag=CYJ00_008795
NZ_PJUS02000327.1	Protein Homology	CDS	5661	7985	.	-	0	ID=cds-WP_101457757.1;Parent=gene-CYJ00_RS08790;Dbxref=GenBank:WP_101457757.1;Name=WP_101457757.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=CYJ00_RS08790;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_101457757.1;transl_table=11
NZ_PJUS02000327.1	RefSeq	gene	8123	9289	.	-	.	ID=gene-CYJ00_RS08795;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08795;old_locus_tag=CYJ00_008800
NZ_PJUS02000327.1	Protein Homology	CDS	8123	9289	.	-	0	ID=cds-WP_101457758.1;Parent=gene-CYJ00_RS08795;Dbxref=GenBank:WP_101457758.1;Name=WP_101457758.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=CYJ00_RS08795;product=multidrug efflux MFS transporter NorA;protein_id=WP_101457758.1;transl_table=11
##sequence-region NZ_PJUS02000380.1 1 338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000380.1	RefSeq	region	1	338	.	+	.	ID=NZ_PJUS02000380.1:1..338;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000380.1	RefSeq	pseudogene	1	338	.	-	.	ID=gene-CYJ00_RS11305;Name=CYJ00_RS11305;end_range=338,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11305;old_locus_tag=CYJ00_011310;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000380.1	Protein Homology	CDS	1	338	.	-	2	ID=cds-CYJ00_RS11305;Parent=gene-CYJ00_RS11305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204270.1;locus_tag=CYJ00_RS11305;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000231.1 1 250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000231.1	RefSeq	region	1	250	.	+	.	ID=NZ_PJUS02000231.1:1..250;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000051.1 1 429
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000051.1	RefSeq	region	1	429	.	+	.	ID=NZ_PJUS02000051.1:1..429;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000051.1	RefSeq	gene	62	429	.	-	.	ID=gene-CYJ00_RS01435;Name=CYJ00_RS01435;end_range=429,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01435;old_locus_tag=CYJ00_001435;partial=true
NZ_PJUS02000051.1	Protein Homology	CDS	62	429	.	-	2	ID=cds-WP_241956925.1;Parent=gene-CYJ00_RS01435;Dbxref=GenBank:WP_241956925.1;Name=WP_241956925.1;end_range=429,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026079.7;locus_tag=CYJ00_RS01435;partial=true;product=cystatin-like fold lipoprotein;protein_id=WP_241956925.1;transl_table=11
##sequence-region NZ_PJUS02000090.1 1 301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000090.1	RefSeq	region	1	301	.	+	.	ID=NZ_PJUS02000090.1:1..301;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000090.1	RefSeq	gene	1	301	.	+	.	ID=gene-CYJ00_RS02375;Name=CYJ00_RS02375;end_range=301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02375;old_locus_tag=CYJ00_002375;partial=true;start_range=.,1
NZ_PJUS02000090.1	Protein Homology	CDS	1	301	.	+	0	ID=cds-WP_198597668.1;Parent=gene-CYJ00_RS02375;Dbxref=GenBank:WP_198597668.1;Name=WP_198597668.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168030.1;locus_tag=CYJ00_RS02375;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_198597668.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000218.1 1 444
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000218.1	RefSeq	region	1	444	.	+	.	ID=NZ_PJUS02000218.1:1..444;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000218.1	RefSeq	gene	41	385	.	-	.	ID=gene-CYJ00_RS13245;Name=CYJ00_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13245
NZ_PJUS02000218.1	GeneMarkS-2+	CDS	41	385	.	-	0	ID=cds-WP_198597684.1;Parent=gene-CYJ00_RS13245;Dbxref=GenBank:WP_198597684.1;Name=WP_198597684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13245;product=hypothetical protein;protein_id=WP_198597684.1;transl_table=11
##sequence-region NZ_PJUS02000095.1 1 380
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000095.1	RefSeq	region	1	380	.	+	.	ID=NZ_PJUS02000095.1:1..380;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000095.1	RefSeq	gene	1	380	.	-	.	ID=gene-CYJ00_RS02500;Name=CYJ00_RS02500;end_range=380,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02500;old_locus_tag=CYJ00_002500;partial=true;start_range=.,1
NZ_PJUS02000095.1	Protein Homology	CDS	1	380	.	-	0	ID=cds-WP_101458078.1;Parent=gene-CYJ00_RS02500;Dbxref=GenBank:WP_101458078.1;Name=WP_101458078.1;end_range=380,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086052.1;locus_tag=CYJ00_RS02500;partial=true;product=DUF6978 family protein;protein_id=WP_101458078.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000062.1 1 489
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000062.1	RefSeq	region	1	489	.	+	.	ID=NZ_PJUS02000062.1:1..489;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000062.1	RefSeq	gene	1	472	.	+	.	ID=gene-CYJ00_RS01700;Name=CYJ00_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01700;old_locus_tag=CYJ00_001700;partial=true;start_range=.,1
NZ_PJUS02000062.1	Protein Homology	CDS	1	472	.	+	1	ID=cds-WP_198597666.1;Parent=gene-CYJ00_RS01700;Dbxref=GenBank:WP_198597666.1;Name=WP_198597666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ00_RS01700;partial=true;product=Abi family protein;protein_id=WP_198597666.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000040.1 1 451
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000040.1	RefSeq	region	1	451	.	+	.	ID=NZ_PJUS02000040.1:1..451;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000040.1	RefSeq	gene	31	396	.	+	.	ID=gene-CYJ00_RS01120;Name=CYJ00_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01120;old_locus_tag=CYJ00_001120
NZ_PJUS02000040.1	Protein Homology	CDS	31	396	.	+	0	ID=cds-WP_000410574.1;Parent=gene-CYJ00_RS01120;Dbxref=GenBank:WP_000410574.1;Name=WP_000410574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=CYJ00_RS01120;product=DUF6262 family protein;protein_id=WP_000410574.1;transl_table=11
##sequence-region NZ_PJUS02000234.1 1 8762
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000234.1	RefSeq	region	1	8762	.	+	.	ID=NZ_PJUS02000234.1:1..8762;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000234.1	RefSeq	pseudogene	1	326	.	+	.	ID=gene-CYJ00_RS13455;Name=CYJ00_RS13455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13455;old_locus_tag=CYJ00_006415;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000234.1	GeneMarkS-2+	CDS	1	326	.	+	2	ID=cds-CYJ00_RS13455;Parent=gene-CYJ00_RS13455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13455;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	537	2879	.	-	.	ID=gene-CYJ00_RS06415;Name=CYJ00_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06415;old_locus_tag=CYJ00_006420
NZ_PJUS02000234.1	Protein Homology	CDS	537	2879	.	-	0	ID=cds-WP_101457759.1;Parent=gene-CYJ00_RS06415;Dbxref=GenBank:WP_101457759.1;Name=WP_101457759.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=CYJ00_RS06415;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_101457759.1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	3822	4769	.	-	.	ID=gene-CYJ00_RS06420;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06420;old_locus_tag=CYJ00_006425
NZ_PJUS02000234.1	Protein Homology	CDS	3822	4769	.	-	0	ID=cds-WP_037542319.1;Parent=gene-CYJ00_RS06420;Dbxref=GenBank:WP_037542319.1;Name=WP_037542319.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613045.1;locus_tag=CYJ00_RS06420;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037542319.1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	4757	5071	.	-	.	ID=gene-CYJ00_RS06425;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CYJ00_RS06425;old_locus_tag=CYJ00_006430
NZ_PJUS02000234.1	Protein Homology	CDS	4757	5071	.	-	0	ID=cds-WP_101457760.1;Parent=gene-CYJ00_RS06425;Dbxref=GenBank:WP_101457760.1;Name=WP_101457760.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=CYJ00_RS06425;product=nitrite reductase small subunit NirD;protein_id=WP_101457760.1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	5076	7481	.	-	.	ID=gene-CYJ00_RS06430;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CYJ00_RS06430;old_locus_tag=CYJ00_006435
NZ_PJUS02000234.1	Protein Homology	CDS	5076	7481	.	-	0	ID=cds-WP_014613043.1;Parent=gene-CYJ00_RS06430;Dbxref=GenBank:WP_014613043.1;Name=WP_014613043.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CYJ00_RS06430;product=nitrite reductase large subunit NirB;protein_id=WP_014613043.1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	7474	7935	.	-	.	ID=gene-CYJ00_RS06435;Name=CYJ00_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06435;old_locus_tag=CYJ00_006440
NZ_PJUS02000234.1	Protein Homology	CDS	7474	7935	.	-	0	ID=cds-WP_015729604.1;Parent=gene-CYJ00_RS06435;Dbxref=GenBank:WP_015729604.1;Name=WP_015729604.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=CYJ00_RS06435;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_015729604.1;transl_table=11
NZ_PJUS02000234.1	RefSeq	gene	7917	8660	.	-	.	ID=gene-CYJ00_RS06440;Name=CYJ00_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06440;old_locus_tag=CYJ00_006445
NZ_PJUS02000234.1	Protein Homology	CDS	7917	8660	.	-	0	ID=cds-WP_233275674.1;Parent=gene-CYJ00_RS06440;Dbxref=GenBank:WP_233275674.1;Name=WP_233275674.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613041.1;locus_tag=CYJ00_RS06440;product=sirohydrochlorin chelatase;protein_id=WP_233275674.1;transl_table=11
##sequence-region NZ_PJUS02000419.1 1 365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000419.1	RefSeq	region	1	365	.	+	.	ID=NZ_PJUS02000419.1:1..365;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000419.1	RefSeq	pseudogene	1	365	.	+	.	ID=gene-CYJ00_RS12465;Name=CYJ00_RS12465;end_range=365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12465;old_locus_tag=CYJ00_012470;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000419.1	Protein Homology	CDS	1	365	.	+	1	ID=cds-CYJ00_RS12465;Parent=gene-CYJ00_RS12465;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613407.1;locus_tag=CYJ00_RS12465;partial=true;product=cytochrome;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000254.1 1 277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000254.1	RefSeq	region	1	277	.	+	.	ID=NZ_PJUS02000254.1:1..277;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000409.1 1 222
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000409.1	RefSeq	region	1	222	.	+	.	ID=NZ_PJUS02000409.1:1..222;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000295.1 1 405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000295.1	RefSeq	region	1	405	.	+	.	ID=NZ_PJUS02000295.1:1..405;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000295.1	RefSeq	gene	1	313	.	-	.	ID=gene-CYJ00_RS07830;Name=CYJ00_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07830;old_locus_tag=CYJ00_007835;partial=true;start_range=.,1
NZ_PJUS02000295.1	Protein Homology	CDS	1	313	.	-	0	ID=cds-WP_133158340.1;Parent=gene-CYJ00_RS07830;Dbxref=GenBank:WP_133158340.1;Name=WP_133158340.1;Ontology_term=GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613406.1;locus_tag=CYJ00_RS07830;partial=true;product=tRNA-dependent cyclodipeptide synthase;protein_id=WP_133158340.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000020.1 1 355
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000020.1	RefSeq	region	1	355	.	+	.	ID=NZ_PJUS02000020.1:1..355;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000020.1	RefSeq	gene	101	355	.	+	.	ID=gene-CYJ00_RS00570;Name=CYJ00_RS00570;end_range=355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00570;old_locus_tag=CYJ00_000570;partial=true
NZ_PJUS02000020.1	Protein Homology	CDS	101	355	.	+	0	ID=cds-WP_198597663.1;Parent=gene-CYJ00_RS00570;Dbxref=GenBank:WP_198597663.1;Name=WP_198597663.1;end_range=355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185175.1;locus_tag=CYJ00_RS00570;partial=true;product=MazG-like family protein;protein_id=WP_198597663.1;transl_table=11
##sequence-region NZ_PJUS02000125.1 1 496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000125.1	RefSeq	region	1	496	.	+	.	ID=NZ_PJUS02000125.1:1..496;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000125.1	RefSeq	gene	1	343	.	+	.	ID=gene-CYJ00_RS03545;Name=CYJ00_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03545;old_locus_tag=CYJ00_003550;partial=true;start_range=.,1
NZ_PJUS02000125.1	Protein Homology	CDS	1	343	.	+	1	ID=cds-WP_133158324.1;Parent=gene-CYJ00_RS03545;Dbxref=GenBank:WP_133158324.1;Name=WP_133158324.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=CYJ00_RS03545;partial=true;product=class D beta-lactamase;protein_id=WP_133158324.1;start_range=.,1;transl_table=11
NZ_PJUS02000125.1	RefSeq	gene	333	496	.	+	.	ID=gene-CYJ00_RS03550;Name=CYJ00_RS03550;end_range=496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03550;old_locus_tag=CYJ00_003555;partial=true
NZ_PJUS02000125.1	Protein Homology	CDS	333	496	.	+	0	ID=cds-WP_180383980.1;Parent=gene-CYJ00_RS03550;Dbxref=GenBank:WP_180383980.1;Name=WP_180383980.1;Ontology_term=GO:0045892,GO:0003677;end_range=496,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=CYJ00_RS03550;partial=true;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=WP_180383980.1;transl_table=11
##sequence-region NZ_PJUS02000291.1 1 357
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000291.1	RefSeq	region	1	357	.	+	.	ID=NZ_PJUS02000291.1:1..357;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000291.1	RefSeq	gene	105	302	.	+	.	ID=gene-CYJ00_RS07760;Name=CYJ00_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07760;old_locus_tag=CYJ00_007765
NZ_PJUS02000291.1	Protein Homology	CDS	105	302	.	+	0	ID=cds-WP_101458079.1;Parent=gene-CYJ00_RS07760;Dbxref=GenBank:WP_101458079.1;Name=WP_101458079.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167409.1;locus_tag=CYJ00_RS07760;product=helix-turn-helix transcriptional regulator;protein_id=WP_101458079.1;transl_table=11
##sequence-region NZ_PJUS02000168.1 1 12966
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000168.1	RefSeq	region	1	12966	.	+	.	ID=NZ_PJUS02000168.1:1..12966;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000168.1	RefSeq	gene	1	950	.	+	.	ID=gene-CYJ00_RS04710;Name=CYJ00_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04710;old_locus_tag=CYJ00_004715;partial=true;start_range=.,1
NZ_PJUS02000168.1	Protein Homology	CDS	1	950	.	+	2	ID=cds-WP_198597679.1;Parent=gene-CYJ00_RS04710;Dbxref=GenBank:WP_198597679.1;Name=WP_198597679.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992927.1;locus_tag=CYJ00_RS04710;partial=true;product=3'-5' exonuclease;protein_id=WP_198597679.1;start_range=.,1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	954	2957	.	+	.	ID=gene-CYJ00_RS04715;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04715;old_locus_tag=CYJ00_004720
NZ_PJUS02000168.1	Protein Homology	CDS	954	2957	.	+	0	ID=cds-WP_015729395.1;Parent=gene-CYJ00_RS04715;Dbxref=GenBank:WP_015729395.1;Name=WP_015729395.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166445.1;locus_tag=CYJ00_RS04715;product=NAD-dependent DNA ligase LigA;protein_id=WP_015729395.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	2969	4174	.	+	.	ID=gene-CYJ00_RS04720;Name=CYJ00_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04720;old_locus_tag=CYJ00_004725
NZ_PJUS02000168.1	Protein Homology	CDS	2969	4174	.	+	0	ID=cds-WP_014613456.1;Parent=gene-CYJ00_RS04720;Dbxref=GenBank:WP_014613456.1;Name=WP_014613456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664913.1;locus_tag=CYJ00_RS04720;product=CamS family sex pheromone protein;protein_id=WP_014613456.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	4563	6116	.	-	.	ID=gene-CYJ00_RS04725;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CYJ00_RS04725;old_locus_tag=CYJ00_004730
NZ_PJUS02000168.1	Protein Homology	CDS	4563	6116	.	-	0	ID=cds-WP_020219895.1;Parent=gene-CYJ00_RS04725;Dbxref=GenBank:WP_020219895.1;Name=WP_020219895.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219895.1;locus_tag=CYJ00_RS04725;product=sodium/proline symporter PutP;protein_id=WP_020219895.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	6471	6773	.	+	.	ID=gene-CYJ00_RS04730;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04730;old_locus_tag=CYJ00_004735
NZ_PJUS02000168.1	Protein Homology	CDS	6471	6773	.	+	0	ID=cds-WP_014613458.1;Parent=gene-CYJ00_RS04730;Dbxref=GenBank:WP_014613458.1;Name=WP_014613458.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=CYJ00_RS04730;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014613458.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	6776	8236	.	+	.	ID=gene-CYJ00_RS04735;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04735;old_locus_tag=CYJ00_004740
NZ_PJUS02000168.1	Protein Homology	CDS	6776	8236	.	+	0	ID=cds-WP_014613459.1;Parent=gene-CYJ00_RS04735;Dbxref=GenBank:WP_014613459.1;Name=WP_014613459.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CYJ00_RS04735;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_014613459.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	8250	9677	.	+	.	ID=gene-CYJ00_RS04740;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04740;old_locus_tag=CYJ00_004745
NZ_PJUS02000168.1	Protein Homology	CDS	8250	9677	.	+	0	ID=cds-WP_014613460.1;Parent=gene-CYJ00_RS04740;Dbxref=GenBank:WP_014613460.1;Name=WP_014613460.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=CYJ00_RS04740;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014613460.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	10355	11287	.	+	.	ID=gene-CYJ00_RS04745;Name=CYJ00_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04745;old_locus_tag=CYJ00_004750
NZ_PJUS02000168.1	Protein Homology	CDS	10355	11287	.	+	0	ID=cds-WP_014613461.1;Parent=gene-CYJ00_RS04745;Dbxref=GenBank:WP_014613461.1;Name=WP_014613461.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=CYJ00_RS04745;product=diacylglycerol kinase;protein_id=WP_014613461.1;transl_table=11
NZ_PJUS02000168.1	RefSeq	gene	11459	12823	.	+	.	ID=gene-CYJ00_RS04750;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CYJ00_RS04750;old_locus_tag=CYJ00_004755
NZ_PJUS02000168.1	Protein Homology	CDS	11459	12823	.	+	0	ID=cds-WP_015729392.1;Parent=gene-CYJ00_RS04750;Dbxref=GenBank:WP_015729392.1;Name=WP_015729392.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613462.1;locus_tag=CYJ00_RS04750;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_015729392.1;transl_table=11
##sequence-region NZ_PJUS02000184.1 1 317
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000184.1	RefSeq	region	1	317	.	+	.	ID=NZ_PJUS02000184.1:1..317;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000184.1	RefSeq	pseudogene	50	317	.	+	.	ID=gene-CYJ00_RS13445;Name=CYJ00_RS13445;end_range=317,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13445;old_locus_tag=CYJ00_005035;partial=true;pseudo=true
NZ_PJUS02000184.1	Protein Homology	CDS	50	317	.	+	0	ID=cds-CYJ00_RS13445;Parent=gene-CYJ00_RS13445;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613782.1;locus_tag=CYJ00_RS13445;partial=true;product=NfeD family protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000027.1 1 267
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000027.1	RefSeq	region	1	267	.	+	.	ID=NZ_PJUS02000027.1:1..267;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000027.1	RefSeq	gene	1	267	.	+	.	ID=gene-CYJ00_RS00745;Name=CYJ00_RS00745;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00745;old_locus_tag=CYJ00_000745;partial=true;start_range=.,1
NZ_PJUS02000027.1	Protein Homology	CDS	1	267	.	+	2	ID=cds-WP_198597665.1;Parent=gene-CYJ00_RS00745;Dbxref=GenBank:WP_198597665.1;Name=WP_198597665.1;Ontology_term=GO:0051715,GO:0005576;end_range=267,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=cytolysis in another organism|0051715||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473587.1;locus_tag=CYJ00_RS00745;partial=true;product=leukocidin family pore-forming toxin;protein_id=WP_198597665.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000220.1 1 407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000220.1	RefSeq	region	1	407	.	+	.	ID=NZ_PJUS02000220.1:1..407;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000191.1 1 267
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000191.1	RefSeq	region	1	267	.	+	.	ID=NZ_PJUS02000191.1:1..267;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000191.1	RefSeq	pseudogene	1	267	.	-	.	ID=gene-CYJ00_RS05240;Name=CYJ00_RS05240;end_range=267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05240;old_locus_tag=CYJ00_005245;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000191.1	Protein Homology	CDS	1	267	.	-	0	ID=cds-CYJ00_RS05240;Parent=gene-CYJ00_RS05240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=CYJ00_RS05240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000276.1 1 308
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000276.1	RefSeq	region	1	308	.	+	.	ID=NZ_PJUS02000276.1:1..308;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000276.1	RefSeq	pseudogene	1	308	.	+	.	ID=gene-CYJ00_RS13475;Name=CYJ00_RS13475;end_range=308,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13475;old_locus_tag=CYJ00_007395;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000276.1	GeneMarkS-2+	CDS	1	308	.	+	0	ID=cds-CYJ00_RS13475;Parent=gene-CYJ00_RS13475;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=308,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13475;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000176.1 1 367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000176.1	RefSeq	region	1	367	.	+	.	ID=NZ_PJUS02000176.1:1..367;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000176.1	RefSeq	gene	1	346	.	-	.	ID=gene-CYJ00_RS04875;Name=CYJ00_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04875;old_locus_tag=CYJ00_004880;partial=true;start_range=.,1
NZ_PJUS02000176.1	Protein Homology	CDS	1	346	.	-	0	ID=cds-WP_133158329.1;Parent=gene-CYJ00_RS04875;Dbxref=GenBank:WP_133158329.1;Name=WP_133158329.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=CYJ00_RS04875;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_133158329.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000421.1 1 261
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000421.1	RefSeq	region	1	261	.	+	.	ID=NZ_PJUS02000421.1:1..261;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000421.1	RefSeq	pseudogene	1	155	.	-	.	ID=gene-CYJ00_RS13865;Name=CYJ00_RS13865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13865;old_locus_tag=CYJ00_012475;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000421.1	Protein Homology	CDS	1	155	.	-	0	ID=cds-CYJ00_RS13865;Parent=gene-CYJ00_RS13865;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169620.1;locus_tag=CYJ00_RS13865;partial=true;product=bile acid:sodium symporter family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000028.1 1 11990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000028.1	RefSeq	region	1	11990	.	+	.	ID=NZ_PJUS02000028.1:1..11990;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000028.1	RefSeq	gene	41	751	.	+	.	ID=gene-CYJ00_RS00750;Name=CYJ00_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00750;old_locus_tag=CYJ00_000750
NZ_PJUS02000028.1	Protein Homology	CDS	41	751	.	+	0	ID=cds-WP_101457761.1;Parent=gene-CYJ00_RS00750;Dbxref=GenBank:WP_101457761.1;Name=WP_101457761.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614677.1;locus_tag=CYJ00_RS00750;product=trypsin-like serine peptidase;protein_id=WP_101457761.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	970	1680	.	+	.	ID=gene-CYJ00_RS00755;Name=CYJ00_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00755;old_locus_tag=CYJ00_000755
NZ_PJUS02000028.1	Protein Homology	CDS	970	1680	.	+	0	ID=cds-WP_101457762.1;Parent=gene-CYJ00_RS00755;Dbxref=GenBank:WP_101457762.1;Name=WP_101457762.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614679.1;locus_tag=CYJ00_RS00755;product=trypsin-like serine peptidase;protein_id=WP_101457762.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	1824	2429	.	-	.	ID=gene-CYJ00_RS00760;Name=CYJ00_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00760;old_locus_tag=CYJ00_000760
NZ_PJUS02000028.1	Protein Homology	CDS	1824	2429	.	-	0	ID=cds-WP_101457763.1;Parent=gene-CYJ00_RS00760;Dbxref=GenBank:WP_101457763.1;Name=WP_101457763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728666.1;locus_tag=CYJ00_RS00760;product=DUF2812 domain-containing protein;protein_id=WP_101457763.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	2413	2745	.	-	.	ID=gene-CYJ00_RS00765;Name=CYJ00_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00765;old_locus_tag=CYJ00_000765
NZ_PJUS02000028.1	Protein Homology	CDS	2413	2745	.	-	0	ID=cds-WP_096548189.1;Parent=gene-CYJ00_RS00765;Dbxref=GenBank:WP_096548189.1;Name=WP_096548189.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614681.1;locus_tag=CYJ00_RS00765;product=PadR family transcriptional regulator;protein_id=WP_096548189.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	2898	4439	.	-	.	ID=gene-CYJ00_RS00770;Name=CYJ00_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00770;old_locus_tag=CYJ00_000770
NZ_PJUS02000028.1	Protein Homology	CDS	2898	4439	.	-	0	ID=cds-WP_101457764.1;Parent=gene-CYJ00_RS00770;Dbxref=GenBank:WP_101457764.1;Name=WP_101457764.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166288.1;locus_tag=CYJ00_RS00770;product=SLC13 family permease;protein_id=WP_101457764.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	5019	5480	.	-	.	ID=gene-CYJ00_RS00775;Name=CYJ00_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00775;old_locus_tag=CYJ00_000775
NZ_PJUS02000028.1	Protein Homology	CDS	5019	5480	.	-	0	ID=cds-WP_014614683.1;Parent=gene-CYJ00_RS00775;Dbxref=GenBank:WP_014614683.1;Name=WP_014614683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166289.1;locus_tag=CYJ00_RS00775;product=threonine/serine exporter family protein;protein_id=WP_014614683.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	5493	6248	.	-	.	ID=gene-CYJ00_RS00780;Name=CYJ00_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00780;old_locus_tag=CYJ00_000780
NZ_PJUS02000028.1	Protein Homology	CDS	5493	6248	.	-	0	ID=cds-WP_014614684.1;Parent=gene-CYJ00_RS00780;Dbxref=GenBank:WP_014614684.1;Name=WP_014614684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614684.1;locus_tag=CYJ00_RS00780;product=threonine/serine exporter family protein;protein_id=WP_014614684.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	pseudogene	6489	6757	.	+	.	ID=gene-CYJ00_RS13835;Name=CYJ00_RS13835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13835;old_locus_tag=CYJ00_000785;pseudo=true
NZ_PJUS02000028.1	Protein Homology	CDS	6489	6757	.	+	0	ID=cds-CYJ00_RS13835;Parent=gene-CYJ00_RS13835;Note=frameshifted;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477818.1;locus_tag=CYJ00_RS13835;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	6754	7092	.	+	.	ID=gene-CYJ00_RS00790;Name=CYJ00_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00790;old_locus_tag=CYJ00_000790
NZ_PJUS02000028.1	Protein Homology	CDS	6754	7092	.	+	0	ID=cds-WP_101457765.1;Parent=gene-CYJ00_RS00790;Dbxref=GenBank:WP_101457765.1;Name=WP_101457765.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614686.1;locus_tag=CYJ00_RS00790;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_101457765.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	7301	8056	.	-	.	ID=gene-CYJ00_RS00795;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS00795;old_locus_tag=CYJ00_000795
NZ_PJUS02000028.1	Protein Homology	CDS	7301	8056	.	-	0	ID=cds-WP_015728662.1;Parent=gene-CYJ00_RS00795;Dbxref=GenBank:WP_015728662.1;Name=WP_015728662.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166293.1;locus_tag=CYJ00_RS00795;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_015728662.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	8224	9213	.	+	.	ID=gene-CYJ00_RS00800;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CYJ00_RS00800;old_locus_tag=CYJ00_000800
NZ_PJUS02000028.1	Protein Homology	CDS	8224	9213	.	+	0	ID=cds-WP_096597732.1;Parent=gene-CYJ00_RS00800;Dbxref=GenBank:WP_096597732.1;Name=WP_096597732.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=CYJ00_RS00800;product=phosphate acetyltransferase;protein_id=WP_096597732.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	9213	10049	.	+	.	ID=gene-CYJ00_RS00805;Name=CYJ00_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00805;old_locus_tag=CYJ00_000805
NZ_PJUS02000028.1	Protein Homology	CDS	9213	10049	.	+	0	ID=cds-WP_020220291.1;Parent=gene-CYJ00_RS00805;Dbxref=GenBank:WP_020220291.1;Name=WP_020220291.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=CYJ00_RS00805;product=lipoate--protein ligase family protein;protein_id=WP_020220291.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	pseudogene	10203	10400	.	-	.	ID=gene-CYJ00_RS00810;Name=CYJ00_RS00810;end_range=10400,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS00810;old_locus_tag=CYJ00_000810;partial=true;pseudo=true
NZ_PJUS02000028.1	Protein Homology	CDS	10203	10400	.	-	0	ID=cds-CYJ00_RS00810;Parent=gene-CYJ00_RS00810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ00_RS00810;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	10645	10995	.	+	.	ID=gene-CYJ00_RS00815;Name=CYJ00_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00815;old_locus_tag=CYJ00_000815
NZ_PJUS02000028.1	Protein Homology	CDS	10645	10995	.	+	0	ID=cds-WP_049770159.1;Parent=gene-CYJ00_RS00815;Dbxref=GenBank:WP_049770159.1;Name=WP_049770159.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.7;locus_tag=CYJ00_RS00815;product=S8 family serine peptidase;protein_id=WP_049770159.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	gene	10998	11747	.	+	.	ID=gene-CYJ00_RS00820;Name=CYJ00_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00820;old_locus_tag=CYJ00_000820
NZ_PJUS02000028.1	Protein Homology	CDS	10998	11747	.	+	0	ID=cds-WP_101457766.1;Parent=gene-CYJ00_RS00820;Dbxref=GenBank:WP_101457766.1;Name=WP_101457766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039645025.1;locus_tag=CYJ00_RS00820;product=SAR2788 family putative toxin;protein_id=WP_101457766.1;transl_table=11
NZ_PJUS02000028.1	RefSeq	pseudogene	11750	11990	.	+	.	ID=gene-CYJ00_RS13405;Name=CYJ00_RS13405;end_range=11990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13405;old_locus_tag=CYJ00_000825;partial=true;pseudo=true
NZ_PJUS02000028.1	Protein Homology	CDS	11750	11990	.	+	0	ID=cds-CYJ00_RS13405;Parent=gene-CYJ00_RS13405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614693.1;locus_tag=CYJ00_RS13405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000253.1 1 216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000253.1	RefSeq	region	1	216	.	+	.	ID=NZ_PJUS02000253.1:1..216;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000314.1 1 457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000314.1	RefSeq	region	1	457	.	+	.	ID=NZ_PJUS02000314.1:1..457;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000314.1	RefSeq	gene	1	457	.	+	.	ID=gene-CYJ00_RS13485;Name=CYJ00_RS13485;end_range=457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13485;old_locus_tag=CYJ00_008465;partial=true;start_range=.,1
NZ_PJUS02000314.1	Protein Homology	CDS	1	457	.	+	2	ID=cds-WP_206748199.1;Parent=gene-CYJ00_RS13485;Dbxref=GenBank:WP_206748199.1;Name=WP_206748199.1;Ontology_term=GO:0055085,GO:0022857;end_range=457,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS13485;partial=true;product=MFS transporter;protein_id=WP_206748199.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000204.1 1 297
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000204.1	RefSeq	region	1	297	.	+	.	ID=NZ_PJUS02000204.1:1..297;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000204.1	RefSeq	pseudogene	44	297	.	+	.	ID=gene-CYJ00_RS13450;Name=CYJ00_RS13450;end_range=297,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13450;partial=true;pseudo=true
NZ_PJUS02000204.1	GeneMarkS-2+	CDS	44	297	.	+	0	ID=cds-CYJ00_RS13450;Parent=gene-CYJ00_RS13450;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=297,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13450;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000375.1 1 275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000375.1	RefSeq	region	1	275	.	+	.	ID=NZ_PJUS02000375.1:1..275;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000375.1	RefSeq	pseudogene	1	275	.	-	.	ID=gene-CYJ00_RS11210;Name=CYJ00_RS11210;end_range=275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11210;old_locus_tag=CYJ00_011215;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000375.1	Protein Homology	CDS	1	275	.	-	2	ID=cds-CYJ00_RS11210;Parent=gene-CYJ00_RS11210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959330.1;locus_tag=CYJ00_RS11210;partial=true;product=accessory Sec system glycosyltransferase GtfA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000237.1 1 427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000237.1	RefSeq	region	1	427	.	+	.	ID=NZ_PJUS02000237.1:1..427;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000237.1	RefSeq	gene	50	427	.	-	.	ID=gene-CYJ00_RS06470;Name=CYJ00_RS06470;end_range=427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06470;old_locus_tag=CYJ00_006475;partial=true
NZ_PJUS02000237.1	Protein Homology	CDS	50	427	.	-	0	ID=cds-WP_198597687.1;Parent=gene-CYJ00_RS06470;Dbxref=GenBank:WP_198597687.1;Name=WP_198597687.1;end_range=427,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ00_RS06470;partial=true;product=Abi family protein;protein_id=WP_198597687.1;transl_table=11
##sequence-region NZ_PJUS02000214.1 1 382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000214.1	RefSeq	region	1	382	.	+	.	ID=NZ_PJUS02000214.1:1..382;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000049.1 1 349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000049.1	RefSeq	region	1	349	.	+	.	ID=NZ_PJUS02000049.1:1..349;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000049.1	RefSeq	gene	103	179	.	-	.	ID=gene-CYJ00_RS01425;Name=CYJ00_RS01425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS01425;old_locus_tag=CYJ00_001425
NZ_PJUS02000049.1	tRNAscan-SE	tRNA	103	179	.	-	.	ID=rna-CYJ00_RS01425;Parent=gene-CYJ00_RS01425;anticodon=(pos:complement(143..145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01425;product=tRNA-Ile
NZ_PJUS02000049.1	tRNAscan-SE	exon	103	179	.	-	.	ID=exon-CYJ00_RS01425-1;Parent=rna-CYJ00_RS01425;anticodon=(pos:complement(143..145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS01425;product=tRNA-Ile
NZ_PJUS02000049.1	RefSeq	gene	284	349	.	-	.	ID=gene-CYJ00_RS13875;Name=CYJ00_RS13875;end_range=349,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ00_RS13875;partial=true
NZ_PJUS02000049.1	cmsearch	rRNA	284	349	.	-	.	ID=rna-CYJ00_RS13875;Parent=gene-CYJ00_RS13875;Dbxref=RFAM:RF00177;end_range=349,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS13875;partial=true;product=16S ribosomal RNA
NZ_PJUS02000049.1	cmsearch	exon	284	349	.	-	.	ID=exon-CYJ00_RS13875-1;Parent=rna-CYJ00_RS13875;Dbxref=RFAM:RF00177;end_range=349,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS13875;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUS02000318.1 1 322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000318.1	RefSeq	region	1	322	.	+	.	ID=NZ_PJUS02000318.1:1..322;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000088.1 1 248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000088.1	RefSeq	region	1	248	.	+	.	ID=NZ_PJUS02000088.1:1..248;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000088.1	RefSeq	gene	1	248	.	-	.	ID=gene-CYJ00_RS02360;Name=CYJ00_RS02360;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02360;old_locus_tag=CYJ00_002360;partial=true
NZ_PJUS02000088.1	Protein Homology	CDS	1	248	.	-	2	ID=cds-WP_274539971.1;Parent=gene-CYJ00_RS02360;Dbxref=GenBank:WP_274539971.1;Name=WP_274539971.1;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729363.1;locus_tag=CYJ00_RS02360;partial=true;product=cation transporter dimerization domain-containing protein;protein_id=WP_274539971.1;transl_table=11
##sequence-region NZ_PJUS02000415.1 1 33718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000415.1	RefSeq	region	1	33718	.	+	.	ID=NZ_PJUS02000415.1:1..33718;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000415.1	RefSeq	gene	1	1137	.	+	.	ID=gene-CYJ00_RS12220;Name=CYJ00_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12220;old_locus_tag=CYJ00_012225;partial=true;start_range=.,1
NZ_PJUS02000415.1	Protein Homology	CDS	1	1137	.	+	0	ID=cds-WP_101457645.1;Parent=gene-CYJ00_RS12220;Dbxref=GenBank:WP_101457645.1;Name=WP_101457645.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729156.1;locus_tag=CYJ00_RS12220;partial=true;product=DNA repair protein RecN;protein_id=WP_101457645.1;start_range=.,1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	1144	2037	.	+	.	ID=gene-CYJ00_RS12225;Name=CYJ00_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12225;old_locus_tag=CYJ00_012230
NZ_PJUS02000415.1	Protein Homology	CDS	1144	2037	.	+	0	ID=cds-WP_096535707.1;Parent=gene-CYJ00_RS12225;Dbxref=GenBank:WP_096535707.1;Name=WP_096535707.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613846.1;locus_tag=CYJ00_RS12225;product=phosphate acyltransferase;protein_id=WP_096535707.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	2611	3669	.	+	.	ID=gene-CYJ00_RS12230;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=CYJ00_RS12230;old_locus_tag=CYJ00_012235
NZ_PJUS02000415.1	Protein Homology	CDS	2611	3669	.	+	0	ID=cds-WP_063278764.1;Parent=gene-CYJ00_RS12230;Dbxref=GenBank:WP_063278764.1;Name=WP_063278764.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613847.1;locus_tag=CYJ00_RS12230;product=butyrate kinase;protein_id=WP_063278764.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	3680	5098	.	+	.	ID=gene-CYJ00_RS12235;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12235;old_locus_tag=CYJ00_012240
NZ_PJUS02000415.1	Protein Homology	CDS	3680	5098	.	+	0	ID=cds-WP_096535705.1;Parent=gene-CYJ00_RS12235;Dbxref=GenBank:WP_096535705.1;Name=WP_096535705.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=CYJ00_RS12235;product=dihydrolipoyl dehydrogenase;protein_id=WP_096535705.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	5120	6118	.	+	.	ID=gene-CYJ00_RS12240;Name=CYJ00_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12240;old_locus_tag=CYJ00_012245
NZ_PJUS02000415.1	Protein Homology	CDS	5120	6118	.	+	0	ID=cds-WP_014613849.1;Parent=gene-CYJ00_RS12240;Dbxref=GenBank:WP_014613849.1;Name=WP_014613849.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=CYJ00_RS12240;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014613849.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	6111	7094	.	+	.	ID=gene-CYJ00_RS12245;Name=CYJ00_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12245;old_locus_tag=CYJ00_012250
NZ_PJUS02000415.1	Protein Homology	CDS	6111	7094	.	+	0	ID=cds-WP_014613850.1;Parent=gene-CYJ00_RS12245;Dbxref=GenBank:WP_014613850.1;Name=WP_014613850.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=CYJ00_RS12245;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014613850.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	7107	8381	.	+	.	ID=gene-CYJ00_RS12250;Name=CYJ00_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12250;old_locus_tag=CYJ00_012255
NZ_PJUS02000415.1	Protein Homology	CDS	7107	8381	.	+	0	ID=cds-WP_101457646.1;Parent=gene-CYJ00_RS12250;Dbxref=GenBank:WP_101457646.1;Name=WP_101457646.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=CYJ00_RS12250;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_101457646.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	8607	9044	.	+	.	ID=gene-CYJ00_RS12255;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12255;old_locus_tag=CYJ00_012260
NZ_PJUS02000415.1	Protein Homology	CDS	8607	9044	.	+	0	ID=cds-WP_014613852.1;Parent=gene-CYJ00_RS12255;Dbxref=GenBank:WP_014613852.1;Name=WP_014613852.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=CYJ00_RS12255;product=bacilliredoxin BrxB;protein_id=WP_014613852.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	9055	10032	.	+	.	ID=gene-CYJ00_RS12260;Name=CYJ00_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12260;old_locus_tag=CYJ00_012265
NZ_PJUS02000415.1	Protein Homology	CDS	9055	10032	.	+	0	ID=cds-WP_063284388.1;Parent=gene-CYJ00_RS12260;Dbxref=GenBank:WP_063284388.1;Name=WP_063284388.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=CYJ00_RS12260;product=aromatic acid exporter family protein;protein_id=WP_063284388.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	10089	10190	.	-	.	ID=gene-CYJ00_RS13180;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=CYJ00_RS13180
NZ_PJUS02000415.1	Protein Homology	CDS	10089	10190	.	-	0	ID=cds-WP_019165260.1;Parent=gene-CYJ00_RS13180;Dbxref=GenBank:WP_019165260.1;Name=WP_019165260.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=CYJ00_RS13180;product=stressosome-associated protein Prli42;protein_id=WP_019165260.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	10361	11476	.	+	.	ID=gene-CYJ00_RS12265;Name=CYJ00_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12265;old_locus_tag=CYJ00_012270
NZ_PJUS02000415.1	Protein Homology	CDS	10361	11476	.	+	0	ID=cds-WP_063284387.1;Parent=gene-CYJ00_RS12265;Dbxref=GenBank:WP_063284387.1;Name=WP_063284387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613854.1;locus_tag=CYJ00_RS12265;product=tripeptidase T;protein_id=WP_063284387.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	11550	12953	.	+	.	ID=gene-CYJ00_RS12270;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12270;old_locus_tag=CYJ00_012275
NZ_PJUS02000415.1	Protein Homology	CDS	11550	12953	.	+	0	ID=cds-WP_014613855.1;Parent=gene-CYJ00_RS12270;Dbxref=GenBank:WP_014613855.1;Name=WP_014613855.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=CYJ00_RS12270;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_014613855.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	13011	13286	.	-	.	ID=gene-CYJ00_RS12275;Name=CYJ00_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12275;old_locus_tag=CYJ00_012280
NZ_PJUS02000415.1	Protein Homology	CDS	13011	13286	.	-	0	ID=cds-WP_015729151.1;Parent=gene-CYJ00_RS12275;Dbxref=GenBank:WP_015729151.1;Name=WP_015729151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729151.1;locus_tag=CYJ00_RS12275;product=MFS transporter;protein_id=WP_015729151.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	13313	13783	.	-	.	ID=gene-CYJ00_RS13860;Name=CYJ00_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13860;old_locus_tag=CYJ00_012285
NZ_PJUS02000415.1	Protein Homology	CDS	13313	13783	.	-	0	ID=cds-WP_101457647.1;Parent=gene-CYJ00_RS13860;Dbxref=GenBank:WP_101457647.1;Name=WP_101457647.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS13860;product=MFS transporter;protein_id=WP_101457647.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	13932	14204	.	-	.	ID=gene-CYJ00_RS12285;Name=CYJ00_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12285;old_locus_tag=CYJ00_012290
NZ_PJUS02000415.1	Protein Homology	CDS	13932	14204	.	-	0	ID=cds-WP_037542978.1;Parent=gene-CYJ00_RS12285;Dbxref=GenBank:WP_037542978.1;Name=WP_037542978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729149.1;locus_tag=CYJ00_RS12285;product=MFS transporter;protein_id=WP_037542978.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	14382	15239	.	-	.	ID=gene-CYJ00_RS12290;Name=CYJ00_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12290;old_locus_tag=CYJ00_012295
NZ_PJUS02000415.1	Protein Homology	CDS	14382	15239	.	-	0	ID=cds-WP_014613858.1;Parent=gene-CYJ00_RS12290;Dbxref=GenBank:WP_014613858.1;Name=WP_014613858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168734.1;locus_tag=CYJ00_RS12290;product=AraC family transcriptional regulator;protein_id=WP_014613858.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	15380	16864	.	-	.	ID=gene-CYJ00_RS12295;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CYJ00_RS12295;old_locus_tag=CYJ00_012300
NZ_PJUS02000415.1	Protein Homology	CDS	15380	16864	.	-	0	ID=cds-WP_014613859.1;Parent=gene-CYJ00_RS12295;Dbxref=GenBank:WP_014613859.1;Name=WP_014613859.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165265.1;locus_tag=CYJ00_RS12295;product=glucose-6-phosphate dehydrogenase;protein_id=WP_014613859.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	17020	17937	.	+	.	ID=gene-CYJ00_RS12300;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CYJ00_RS12300;old_locus_tag=CYJ00_012305
NZ_PJUS02000415.1	Protein Homology	CDS	17020	17937	.	+	0	ID=cds-WP_014613860.1;Parent=gene-CYJ00_RS12300;Dbxref=GenBank:WP_014613860.1;Name=WP_014613860.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165266.1;locus_tag=CYJ00_RS12300;product=ribonuclease Z;protein_id=WP_014613860.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	18062	18877	.	-	.	ID=gene-CYJ00_RS12305;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CYJ00_RS12305;old_locus_tag=CYJ00_012310
NZ_PJUS02000415.1	Protein Homology	CDS	18062	18877	.	-	0	ID=cds-WP_014613861.1;Parent=gene-CYJ00_RS12305;Dbxref=GenBank:WP_014613861.1;Name=WP_014613861.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613861.1;locus_tag=CYJ00_RS12305;product=pyrroline-5-carboxylate reductase;protein_id=WP_014613861.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	18963	19718	.	+	.	ID=gene-CYJ00_RS12310;Name=CYJ00_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12310;old_locus_tag=CYJ00_012315
NZ_PJUS02000415.1	Protein Homology	CDS	18963	19718	.	+	0	ID=cds-WP_037542980.1;Parent=gene-CYJ00_RS12310;Dbxref=GenBank:WP_037542980.1;Name=WP_037542980.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729147.1;locus_tag=CYJ00_RS12310;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_037542980.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	19715	20635	.	-	.	ID=gene-CYJ00_RS12315;Name=CYJ00_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12315;old_locus_tag=CYJ00_012320
NZ_PJUS02000415.1	Protein Homology	CDS	19715	20635	.	-	0	ID=cds-WP_015729146.1;Parent=gene-CYJ00_RS12315;Dbxref=GenBank:WP_015729146.1;Name=WP_015729146.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613863.1;locus_tag=CYJ00_RS12315;product=aldo/keto reductase;protein_id=WP_015729146.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	20715	21257	.	+	.	ID=gene-CYJ00_RS12320;Name=CYJ00_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12320;old_locus_tag=CYJ00_012325
NZ_PJUS02000415.1	Protein Homology	CDS	20715	21257	.	+	0	ID=cds-WP_014613864.1;Parent=gene-CYJ00_RS12320;Dbxref=GenBank:WP_014613864.1;Name=WP_014613864.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613864.1;locus_tag=CYJ00_RS12320;product=NUDIX hydrolase;protein_id=WP_014613864.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	21362	21817	.	+	.	ID=gene-CYJ00_RS12325;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CYJ00_RS12325;old_locus_tag=CYJ00_012330
NZ_PJUS02000415.1	Protein Homology	CDS	21362	21817	.	+	0	ID=cds-WP_014613865.1;Parent=gene-CYJ00_RS12325;Dbxref=GenBank:WP_014613865.1;Name=WP_014613865.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613865.1;locus_tag=CYJ00_RS12325;product=ferric iron uptake transcriptional regulator;protein_id=WP_014613865.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	21857	22744	.	+	.	ID=gene-CYJ00_RS12330;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CYJ00_RS12330;old_locus_tag=CYJ00_012335
NZ_PJUS02000415.1	Protein Homology	CDS	21857	22744	.	+	0	ID=cds-WP_014613866.1;Parent=gene-CYJ00_RS12330;Dbxref=GenBank:WP_014613866.1;Name=WP_014613866.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447735.1;locus_tag=CYJ00_RS12330;product=site-specific tyrosine recombinase XerD;protein_id=WP_014613866.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	23031	23537	.	-	.	ID=gene-CYJ00_RS12335;Name=CYJ00_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12335;old_locus_tag=CYJ00_012340
NZ_PJUS02000415.1	Protein Homology	CDS	23031	23537	.	-	0	ID=cds-WP_014613868.1;Parent=gene-CYJ00_RS12335;Dbxref=GenBank:WP_014613868.1;Name=WP_014613868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613868.1;locus_tag=CYJ00_RS12335;product=DUF309 domain-containing protein;protein_id=WP_014613868.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	23632	24360	.	+	.	ID=gene-CYJ00_RS12340;Name=CYJ00_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12340;old_locus_tag=CYJ00_012345
NZ_PJUS02000415.1	Protein Homology	CDS	23632	24360	.	+	0	ID=cds-WP_014613869.1;Parent=gene-CYJ00_RS12340;Dbxref=GenBank:WP_014613869.1;Name=WP_014613869.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168744.1;locus_tag=CYJ00_RS12340;product=segregation and condensation protein A;protein_id=WP_014613869.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	24350	24892	.	+	.	ID=gene-CYJ00_RS12345;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS12345;old_locus_tag=CYJ00_012350
NZ_PJUS02000415.1	Protein Homology	CDS	24350	24892	.	+	0	ID=cds-WP_037542989.1;Parent=gene-CYJ00_RS12345;Dbxref=GenBank:WP_037542989.1;Name=WP_037542989.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=CYJ00_RS12345;product=SMC-Scp complex subunit ScpB;protein_id=WP_037542989.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	24893	25639	.	+	.	ID=gene-CYJ00_RS12350;Name=CYJ00_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12350;old_locus_tag=CYJ00_012355
NZ_PJUS02000415.1	Protein Homology	CDS	24893	25639	.	+	0	ID=cds-WP_014613871.1;Parent=gene-CYJ00_RS12350;Dbxref=GenBank:WP_014613871.1;Name=WP_014613871.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165277.1;locus_tag=CYJ00_RS12350;product=pseudouridine synthase;protein_id=WP_014613871.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	25751	26473	.	+	.	ID=gene-CYJ00_RS12355;Name=CYJ00_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12355;old_locus_tag=CYJ00_012360
NZ_PJUS02000415.1	Protein Homology	CDS	25751	26473	.	+	0	ID=cds-WP_026066968.1;Parent=gene-CYJ00_RS12355;Dbxref=GenBank:WP_026066968.1;Name=WP_026066968.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724528.1;locus_tag=CYJ00_RS12355;product=response regulator transcription factor;protein_id=WP_026066968.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	26460	28217	.	+	.	ID=gene-CYJ00_RS12360;Name=CYJ00_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12360;old_locus_tag=CYJ00_012365
NZ_PJUS02000415.1	Protein Homology	CDS	26460	28217	.	+	0	ID=cds-WP_014613873.1;Parent=gene-CYJ00_RS12360;Dbxref=GenBank:WP_014613873.1;Name=WP_014613873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=CYJ00_RS12360;product=ATP-binding protein;protein_id=WP_014613873.1;transl_table=11
NZ_PJUS02000415.1	cmsearch	riboswitch	28373	28511	.	+	.	ID=id-NZ_PJUS02000415.1:28373..28511;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000415.1	RefSeq	gene	28577	29122	.	+	.	ID=gene-CYJ00_RS12365;Name=CYJ00_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12365;old_locus_tag=CYJ00_012370
NZ_PJUS02000415.1	Protein Homology	CDS	28577	29122	.	+	0	ID=cds-WP_014613874.1;Parent=gene-CYJ00_RS12365;Dbxref=GenBank:WP_014613874.1;Name=WP_014613874.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168748.1;locus_tag=CYJ00_RS12365;product=ECF transporter S component;protein_id=WP_014613874.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	29385	29633	.	-	.	ID=gene-CYJ00_RS12370;Name=CYJ00_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12370;old_locus_tag=CYJ00_012375
NZ_PJUS02000415.1	Protein Homology	CDS	29385	29633	.	-	0	ID=cds-WP_014613875.1;Parent=gene-CYJ00_RS12370;Dbxref=GenBank:WP_014613875.1;Name=WP_014613875.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CYJ00_RS12370;product=ferredoxin;protein_id=WP_014613875.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	29735	30682	.	+	.	ID=gene-CYJ00_RS12375;Name=CYJ00_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12375;old_locus_tag=CYJ00_012380
NZ_PJUS02000415.1	Protein Homology	CDS	29735	30682	.	+	0	ID=cds-WP_037542991.1;Parent=gene-CYJ00_RS12375;Dbxref=GenBank:WP_037542991.1;Name=WP_037542991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165280.1;locus_tag=CYJ00_RS12375;product=helix-turn-helix domain-containing protein;protein_id=WP_037542991.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	30675	32051	.	+	.	ID=gene-CYJ00_RS12380;Name=CYJ00_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12380;old_locus_tag=CYJ00_012385
NZ_PJUS02000415.1	Protein Homology	CDS	30675	32051	.	+	0	ID=cds-WP_037542994.1;Parent=gene-CYJ00_RS12380;Dbxref=GenBank:WP_037542994.1;Name=WP_037542994.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165281.1;locus_tag=CYJ00_RS12380;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_037542994.1;transl_table=11
NZ_PJUS02000415.1	RefSeq	gene	32226	33581	.	+	.	ID=gene-CYJ00_RS12385;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=CYJ00_RS12385;old_locus_tag=CYJ00_012390
NZ_PJUS02000415.1	Protein Homology	CDS	32226	33581	.	+	0	ID=cds-WP_037542999.1;Parent=gene-CYJ00_RS12385;Dbxref=GenBank:WP_037542999.1;Name=WP_037542999.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729142.1;locus_tag=CYJ00_RS12385;product=elastin-binding protein EbpS;protein_id=WP_037542999.1;transl_table=11
##sequence-region NZ_PJUS02000347.1 1 9200
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000347.1	RefSeq	region	1	9200	.	+	.	ID=NZ_PJUS02000347.1:1..9200;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000347.1	RefSeq	gene	1	1046	.	+	.	ID=gene-CYJ00_RS10585;Name=CYJ00_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10585;old_locus_tag=CYJ00_010590;partial=true;start_range=.,1
NZ_PJUS02000347.1	Protein Homology	CDS	1	1046	.	+	2	ID=cds-WP_101457767.1;Parent=gene-CYJ00_RS10585;Dbxref=GenBank:WP_101457767.1;Name=WP_101457767.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166234.1;locus_tag=CYJ00_RS10585;partial=true;product=MFS transporter;protein_id=WP_101457767.1;start_range=.,1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	1033	2751	.	+	.	ID=gene-CYJ00_RS10590;Name=CYJ00_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10590;old_locus_tag=CYJ00_010595
NZ_PJUS02000347.1	Protein Homology	CDS	1033	2751	.	+	0	ID=cds-WP_101457768.1;Parent=gene-CYJ00_RS10590;Dbxref=GenBank:WP_101457768.1;Name=WP_101457768.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728692.1;locus_tag=CYJ00_RS10590;product=IucA/IucC family protein;protein_id=WP_101457768.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	2735	4489	.	+	.	ID=gene-CYJ00_RS10595;Name=sbnF;gbkey=Gene;gene=sbnF;gene_biotype=protein_coding;locus_tag=CYJ00_RS10595;old_locus_tag=CYJ00_010600
NZ_PJUS02000347.1	Protein Homology	CDS	2735	4489	.	+	0	ID=cds-WP_101457769.1;Parent=gene-CYJ00_RS10595;Dbxref=GenBank:WP_101457769.1;Name=WP_101457769.1;gbkey=CDS;gene=sbnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614632.1;locus_tag=CYJ00_RS10595;product=staphyloferrin B biosynthesis protein SbnF;protein_id=WP_101457769.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	4486	5280	.	+	.	ID=gene-CYJ00_RS10600;Name=CYJ00_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10600;old_locus_tag=CYJ00_010605
NZ_PJUS02000347.1	Protein Homology	CDS	4486	5280	.	+	0	ID=cds-WP_015728694.1;Parent=gene-CYJ00_RS10600;Dbxref=GenBank:WP_015728694.1;Name=WP_015728694.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728694.1;locus_tag=CYJ00_RS10600;product=HpcH/HpaI aldolase family protein;protein_id=WP_015728694.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	5255	6457	.	+	.	ID=gene-CYJ00_RS10605;Name=CYJ00_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10605;old_locus_tag=CYJ00_010610
NZ_PJUS02000347.1	Protein Homology	CDS	5255	6457	.	+	0	ID=cds-WP_020220037.1;Parent=gene-CYJ00_RS10605;Dbxref=GenBank:WP_020220037.1;Name=WP_020220037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614630.1;locus_tag=CYJ00_RS10605;product=type III PLP-dependent enzyme;protein_id=WP_020220037.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	6454	7218	.	+	.	ID=gene-CYJ00_RS10610;Name=sbnI;gbkey=Gene;gene=sbnI;gene_biotype=protein_coding;locus_tag=CYJ00_RS10610;old_locus_tag=CYJ00_010615
NZ_PJUS02000347.1	Protein Homology	CDS	6454	7218	.	+	0	ID=cds-WP_015728696.1;Parent=gene-CYJ00_RS10610;Dbxref=GenBank:WP_015728696.1;Name=WP_015728696.1;gbkey=CDS;gene=sbnI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166229.1;locus_tag=CYJ00_RS10610;product=bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI;protein_id=WP_015728696.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	7500	8243	.	-	.	ID=gene-CYJ00_RS10615;Name=CYJ00_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10615;old_locus_tag=CYJ00_010620
NZ_PJUS02000347.1	Protein Homology	CDS	7500	8243	.	-	0	ID=cds-WP_037543834.1;Parent=gene-CYJ00_RS10615;Dbxref=GenBank:WP_037543834.1;Name=WP_037543834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728697.1;locus_tag=CYJ00_RS10615;product=M50 family metallopeptidase;protein_id=WP_037543834.1;transl_table=11
NZ_PJUS02000347.1	RefSeq	gene	8317	8727	.	-	.	ID=gene-CYJ00_RS10620;Name=CYJ00_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10620;old_locus_tag=CYJ00_010625
NZ_PJUS02000347.1	Protein Homology	CDS	8317	8727	.	-	0	ID=cds-WP_233276667.1;Parent=gene-CYJ00_RS10620;Dbxref=GenBank:WP_233276667.1;Name=WP_233276667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220039.1;locus_tag=CYJ00_RS10620;product=LbetaH domain-containing protein;protein_id=WP_233276667.1;transl_table=11
##sequence-region NZ_PJUS02000171.1 1 303
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000171.1	RefSeq	region	1	303	.	+	.	ID=NZ_PJUS02000171.1:1..303;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000171.1	RefSeq	gene	1	303	.	+	.	ID=gene-CYJ00_RS04820;Name=CYJ00_RS04820;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04820;old_locus_tag=CYJ00_004825;partial=true;start_range=.,1
NZ_PJUS02000171.1	Protein Homology	CDS	1	303	.	+	1	ID=cds-WP_157939002.1;Parent=gene-CYJ00_RS04820;Dbxref=GenBank:WP_157939002.1;Name=WP_157939002.1;Ontology_term=GO:0003677,GO:0008170;end_range=303,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.7;locus_tag=CYJ00_RS04820;partial=true;product=N-6 DNA methylase;protein_id=WP_157939002.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000315.1 1 232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000315.1	RefSeq	region	1	232	.	+	.	ID=NZ_PJUS02000315.1:1..232;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000061.1 1 201
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000061.1	RefSeq	region	1	201	.	+	.	ID=NZ_PJUS02000061.1:1..201;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000061.1	RefSeq	gene	1	200	.	+	.	ID=gene-CYJ00_RS13420;Name=CYJ00_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13420;old_locus_tag=CYJ00_001695;partial=true;start_range=.,1
NZ_PJUS02000061.1	GeneMarkS-2+	CDS	1	200	.	+	2	ID=cds-WP_206748191.1;Parent=gene-CYJ00_RS13420;Dbxref=GenBank:WP_206748191.1;Name=WP_206748191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13420;partial=true;product=hypothetical protein;protein_id=WP_206748191.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000331.1 1 216503
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000331.1	RefSeq	region	1	216503	.	+	.	ID=NZ_PJUS02000331.1:1..216503;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000331.1	RefSeq	gene	131	526	.	+	.	ID=gene-CYJ00_RS08900;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08900;old_locus_tag=CYJ00_008905
NZ_PJUS02000331.1	Protein Homology	CDS	131	526	.	+	0	ID=cds-WP_014614374.1;Parent=gene-CYJ00_RS08900;Dbxref=GenBank:WP_014614374.1;Name=WP_014614374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=CYJ00_RS08900;product=transcriptional regulator SpxA;protein_id=WP_014614374.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	860	1558	.	+	.	ID=gene-CYJ00_RS08905;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08905;old_locus_tag=CYJ00_008910
NZ_PJUS02000331.1	Protein Homology	CDS	860	1558	.	+	0	ID=cds-WP_101458018.1;Parent=gene-CYJ00_RS08905;Dbxref=GenBank:WP_101458018.1;Name=WP_101458018.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165987.1;locus_tag=CYJ00_RS08905;product=adaptor protein MecA;protein_id=WP_101458018.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	2048	3955	.	-	.	ID=gene-CYJ00_RS08910;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ00_RS08910;old_locus_tag=CYJ00_008915
NZ_PJUS02000331.1	Protein Homology	CDS	2048	3955	.	-	0	ID=cds-WP_096536010.1;Parent=gene-CYJ00_RS08910;Dbxref=GenBank:WP_096536010.1;Name=WP_096536010.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219985.1;locus_tag=CYJ00_RS08910;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_096536010.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	4044	4559	.	-	.	ID=gene-CYJ00_RS08915;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08915;old_locus_tag=CYJ00_008920
NZ_PJUS02000331.1	Protein Homology	CDS	4044	4559	.	-	0	ID=cds-WP_014613254.1;Parent=gene-CYJ00_RS08915;Dbxref=GenBank:WP_014613254.1;Name=WP_014613254.1;Ontology_term=GO:0019512,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CYJ00_RS08915;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_014613254.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	4575	5003	.	-	.	ID=gene-CYJ00_RS08920;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08920;old_locus_tag=CYJ00_008925
NZ_PJUS02000331.1	Protein Homology	CDS	4575	5003	.	-	0	ID=cds-WP_014613253.1;Parent=gene-CYJ00_RS08920;Dbxref=GenBank:WP_014613253.1;Name=WP_014613253.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=CYJ00_RS08920;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_014613253.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	5208	5960	.	-	.	ID=gene-CYJ00_RS08925;Name=CYJ00_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08925;old_locus_tag=CYJ00_008930
NZ_PJUS02000331.1	Protein Homology	CDS	5208	5960	.	-	0	ID=cds-WP_037542457.1;Parent=gene-CYJ00_RS08925;Dbxref=GenBank:WP_037542457.1;Name=WP_037542457.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=CYJ00_RS08925;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037542457.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	5927	6607	.	+	.	ID=gene-CYJ00_RS08930;Name=CYJ00_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08930;old_locus_tag=CYJ00_008935
NZ_PJUS02000331.1	Protein Homology	CDS	5927	6607	.	+	0	ID=cds-WP_423830914.1;Parent=gene-CYJ00_RS08930;Dbxref=GenBank:WP_423830914.1;Name=WP_423830914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614358.1;locus_tag=CYJ00_RS08930;product=SDR family oxidoreductase;protein_id=WP_423830914.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	6899	7933	.	-	.	ID=gene-CYJ00_RS08935;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=CYJ00_RS08935;old_locus_tag=CYJ00_008940
NZ_PJUS02000331.1	Protein Homology	CDS	6899	7933	.	-	0	ID=cds-WP_241956987.1;Parent=gene-CYJ00_RS08935;Dbxref=GenBank:WP_241956987.1;Name=WP_241956987.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220014.1;locus_tag=CYJ00_RS08935;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_241956987.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	8400	9128	.	-	.	ID=gene-CYJ00_RS08940;Name=CYJ00_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08940;old_locus_tag=CYJ00_008945
NZ_PJUS02000331.1	Protein Homology	CDS	8400	9128	.	-	0	ID=cds-WP_096549021.1;Parent=gene-CYJ00_RS08940;Dbxref=GenBank:WP_096549021.1;Name=WP_096549021.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012234.7;locus_tag=CYJ00_RS08940;product=ATP-binding cassette domain-containing protein;protein_id=WP_096549021.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	9244	9606	.	-	.	ID=gene-CYJ00_RS08945;Name=CYJ00_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08945;old_locus_tag=CYJ00_008950
NZ_PJUS02000331.1	Protein Homology	CDS	9244	9606	.	-	0	ID=cds-WP_157939010.1;Parent=gene-CYJ00_RS08945;Dbxref=GenBank:WP_157939010.1;Name=WP_157939010.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.7;locus_tag=CYJ00_RS08945;product=integrase core domain-containing protein;protein_id=WP_157939010.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	9814	10572	.	+	.	ID=gene-CYJ00_RS08950;Name=CYJ00_RS08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS08950;old_locus_tag=CYJ00_008955;partial=true;pseudo=true;start_range=.,9814
NZ_PJUS02000331.1	Protein Homology	CDS	9814	10572	.	+	0	ID=cds-CYJ00_RS08950;Parent=gene-CYJ00_RS08950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=CYJ00_RS08950;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,9814;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	10733	11683	.	+	.	ID=gene-CYJ00_RS08955;Name=CYJ00_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08955;old_locus_tag=CYJ00_008960
NZ_PJUS02000331.1	Protein Homology	CDS	10733	11683	.	+	0	ID=cds-WP_014613605.1;Parent=gene-CYJ00_RS08955;Dbxref=GenBank:WP_014613605.1;Name=WP_014613605.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613605.1;locus_tag=CYJ00_RS08955;product=L-lactate dehydrogenase;protein_id=WP_014613605.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	11717	11893	.	+	.	ID=gene-CYJ00_RS08960;Name=CYJ00_RS08960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS08960;old_locus_tag=CYJ00_008965;partial=true;pseudo=true;start_range=.,11717
NZ_PJUS02000331.1	Protein Homology	CDS	11717	11893	.	+	0	ID=cds-CYJ00_RS08960;Parent=gene-CYJ00_RS08960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CYJ00_RS08960;partial=true;product=preQ(1) synthase;pseudo=true;start_range=.,11717;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	12215	12427	.	-	.	ID=gene-CYJ00_RS08965;Name=CYJ00_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08965;old_locus_tag=CYJ00_008970
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	12215	12427	.	-	0	ID=cds-WP_101458023.1;Parent=gene-CYJ00_RS08965;Dbxref=GenBank:WP_101458023.1;Name=WP_101458023.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS08965;product=GNAT family N-acetyltransferase;protein_id=WP_101458023.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	12434	12709	.	-	.	ID=gene-CYJ00_RS08970;Name=CYJ00_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08970;old_locus_tag=CYJ00_008975
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	12434	12709	.	-	0	ID=cds-WP_101458024.1;Parent=gene-CYJ00_RS08970;Dbxref=GenBank:WP_101458024.1;Name=WP_101458024.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS08970;product=GNAT family N-acetyltransferase;protein_id=WP_101458024.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	12709	13596	.	-	.	ID=gene-CYJ00_RS08975;Name=CYJ00_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08975;old_locus_tag=CYJ00_008980
NZ_PJUS02000331.1	Protein Homology	CDS	12709	13596	.	-	0	ID=cds-WP_157939011.1;Parent=gene-CYJ00_RS08975;Dbxref=GenBank:WP_157939011.1;Name=WP_157939011.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS08975;product=MFS transporter;protein_id=WP_157939011.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	13666	14106	.	-	.	ID=gene-CYJ00_RS08980;Name=CYJ00_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08980;old_locus_tag=CYJ00_008985
NZ_PJUS02000331.1	Protein Homology	CDS	13666	14106	.	-	0	ID=cds-WP_014614222.1;Parent=gene-CYJ00_RS08980;Dbxref=GenBank:WP_014614222.1;Name=WP_014614222.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614222.1;locus_tag=CYJ00_RS08980;product=YlbF/YmcA family competence regulator;protein_id=WP_014614222.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	14108	15178	.	-	.	ID=gene-CYJ00_RS08985;Name=CYJ00_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08985;old_locus_tag=CYJ00_008990
NZ_PJUS02000331.1	Protein Homology	CDS	14108	15178	.	-	0	ID=cds-WP_014614223.1;Parent=gene-CYJ00_RS08985;Dbxref=GenBank:WP_014614223.1;Name=WP_014614223.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=CYJ00_RS08985;product=CAP domain-containing protein;protein_id=WP_014614223.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	16147	17496	.	+	.	ID=gene-CYJ00_RS08990;Name=CYJ00_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08990;old_locus_tag=CYJ00_008995
NZ_PJUS02000331.1	Protein Homology	CDS	16147	17496	.	+	0	ID=cds-WP_274539978.1;Parent=gene-CYJ00_RS08990;Dbxref=GenBank:WP_274539978.1;Name=WP_274539978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003606.0;locus_tag=CYJ00_RS08990;product=malate:quinone oxidoreductase;protein_id=WP_274539978.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	17615	18640	.	+	.	ID=gene-CYJ00_RS08995;Name=CYJ00_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08995;old_locus_tag=CYJ00_009000
NZ_PJUS02000331.1	Protein Homology	CDS	17615	18640	.	+	0	ID=cds-WP_063284544.1;Parent=gene-CYJ00_RS08995;Dbxref=GenBank:WP_063284544.1;Name=WP_063284544.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166961.1;locus_tag=CYJ00_RS08995;product=methionine ABC transporter ATP-binding protein;protein_id=WP_063284544.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	18634	19185	.	+	.	ID=gene-CYJ00_RS09000;Name=CYJ00_RS09000;end_range=19185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09000;old_locus_tag=CYJ00_009005;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	18634	19185	.	+	0	ID=cds-CYJ00_RS09000;Parent=gene-CYJ00_RS09000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0048473,GO:0033232,GO:0042626;end_range=19185,.;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CYJ00_RS09000;partial=true;product=methionine ABC transporter permease;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	19343	19684	.	+	.	ID=gene-CYJ00_RS09005;Name=CYJ00_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09005;old_locus_tag=CYJ00_009010
NZ_PJUS02000331.1	Protein Homology	CDS	19343	19684	.	+	0	ID=cds-WP_014613908.1;Parent=gene-CYJ00_RS09005;Dbxref=GenBank:WP_014613908.1;Name=WP_014613908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613908.1;locus_tag=CYJ00_RS09005;product=DUF1798 family protein;protein_id=WP_014613908.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	19677	20234	.	+	.	ID=gene-CYJ00_RS09010;Name=CYJ00_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09010;old_locus_tag=CYJ00_009015
NZ_PJUS02000331.1	Protein Homology	CDS	19677	20234	.	+	0	ID=cds-WP_015729130.1;Parent=gene-CYJ00_RS09010;Dbxref=GenBank:WP_015729130.1;Name=WP_015729130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165313.1;locus_tag=CYJ00_RS09010;product=SLOG family protein;protein_id=WP_015729130.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	20254	20589	.	+	.	ID=gene-CYJ00_RS09015;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=CYJ00_RS09015;old_locus_tag=CYJ00_009020
NZ_PJUS02000331.1	Protein Homology	CDS	20254	20589	.	+	0	ID=cds-WP_014613910.1;Parent=gene-CYJ00_RS09015;Dbxref=GenBank:WP_014613910.1;Name=WP_014613910.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CYJ00_RS09015;product=cell division regulator GpsB;protein_id=WP_014613910.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	20631	21009	.	+	.	ID=gene-CYJ00_RS09020;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CYJ00_RS09020;old_locus_tag=CYJ00_009025
NZ_PJUS02000331.1	cmsearch	RNase_P_RNA	20631	21009	.	+	.	ID=rna-CYJ00_RS09020;Parent=gene-CYJ00_RS09020;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS09020;product=RNase P RNA component class B
NZ_PJUS02000331.1	cmsearch	exon	20631	21009	.	+	.	ID=exon-CYJ00_RS09020-1;Parent=rna-CYJ00_RS09020;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS09020;product=RNase P RNA component class B
NZ_PJUS02000331.1	RefSeq	gene	21055	21261	.	+	.	ID=gene-CYJ00_RS09025;Name=CYJ00_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09025;old_locus_tag=CYJ00_009030
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	21055	21261	.	+	0	ID=cds-WP_241956952.1;Parent=gene-CYJ00_RS09025;Dbxref=GenBank:WP_241956952.1;Name=WP_241956952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09025;product=hypothetical protein;protein_id=WP_241956952.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	21254	22108	.	+	.	ID=gene-CYJ00_RS09030;Name=CYJ00_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09030;old_locus_tag=CYJ00_009035
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	21254	22108	.	+	0	ID=cds-WP_241956953.1;Parent=gene-CYJ00_RS09030;Dbxref=GenBank:WP_241956953.1;Name=WP_241956953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09030;product=MFS transporter;protein_id=WP_241956953.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	22084	22431	.	+	.	ID=gene-CYJ00_RS13640;Name=CYJ00_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13640
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	22084	22431	.	+	0	ID=cds-WP_233510569.1;Parent=gene-CYJ00_RS13640;Dbxref=GenBank:WP_233510569.1;Name=WP_233510569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13640;product=MFS transporter;protein_id=WP_233510569.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	22885	22960	.	+	.	ID=gene-CYJ00_RS09035;Name=CYJ00_RS09035;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09035;old_locus_tag=CYJ00_009040
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	22885	22960	.	+	.	ID=rna-CYJ00_RS09035;Parent=gene-CYJ00_RS09035;anticodon=(pos:22918..22920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09035;product=tRNA-Val
NZ_PJUS02000331.1	tRNAscan-SE	exon	22885	22960	.	+	.	ID=exon-CYJ00_RS09035-1;Parent=rna-CYJ00_RS09035;anticodon=(pos:22918..22920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09035;product=tRNA-Val
NZ_PJUS02000331.1	RefSeq	gene	22984	23059	.	+	.	ID=gene-CYJ00_RS09040;Name=CYJ00_RS09040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09040;old_locus_tag=CYJ00_009045
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	22984	23059	.	+	.	ID=rna-CYJ00_RS09040;Parent=gene-CYJ00_RS09040;anticodon=(pos:23017..23019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09040;product=tRNA-Thr
NZ_PJUS02000331.1	tRNAscan-SE	exon	22984	23059	.	+	.	ID=exon-CYJ00_RS09040-1;Parent=rna-CYJ00_RS09040;anticodon=(pos:23017..23019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09040;product=tRNA-Thr
NZ_PJUS02000331.1	RefSeq	gene	23064	23136	.	+	.	ID=gene-CYJ00_RS09045;Name=CYJ00_RS09045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09045;old_locus_tag=CYJ00_009050
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	23064	23136	.	+	.	ID=rna-CYJ00_RS09045;Parent=gene-CYJ00_RS09045;anticodon=(pos:23097..23099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09045;product=tRNA-Lys
NZ_PJUS02000331.1	tRNAscan-SE	exon	23064	23136	.	+	.	ID=exon-CYJ00_RS09045-1;Parent=rna-CYJ00_RS09045;anticodon=(pos:23097..23099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09045;product=tRNA-Lys
NZ_PJUS02000331.1	RefSeq	gene	23514	24419	.	+	.	ID=gene-CYJ00_RS09050;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=CYJ00_RS09050;old_locus_tag=CYJ00_009055
NZ_PJUS02000331.1	Protein Homology	CDS	23514	24419	.	+	0	ID=cds-WP_014613286.1;Parent=gene-CYJ00_RS09050;Dbxref=GenBank:WP_014613286.1;Name=WP_014613286.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=CYJ00_RS09050;product=arginase;protein_id=WP_014613286.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	24629	25540	.	+	.	ID=gene-CYJ00_RS09055;Name=CYJ00_RS09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09055;old_locus_tag=CYJ00_009060;partial=true;pseudo=true;start_range=.,24629
NZ_PJUS02000331.1	Protein Homology	CDS	24629	25540	.	+	0	ID=cds-CYJ00_RS09055;Parent=gene-CYJ00_RS09055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=CYJ00_RS09055;partial=true;product=AMP-binding protein;pseudo=true;start_range=.,24629;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	25856	26428	.	+	.	ID=gene-CYJ00_RS13645;Name=CYJ00_RS13645;end_range=26428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13645;old_locus_tag=CYJ00_009065;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	25856	26428	.	+	0	ID=cds-CYJ00_RS13645;Parent=gene-CYJ00_RS13645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004329,GO:0005524;end_range=26428,.;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CYJ00_RS13645;partial=true;product=formate--tetrahydrofolate ligase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	26477	26905	.	+	.	ID=gene-CYJ00_RS13650;Name=CYJ00_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13650
NZ_PJUS02000331.1	Protein Homology	CDS	26477	26905	.	+	0	ID=cds-WP_241956988.1;Parent=gene-CYJ00_RS13650;Dbxref=GenBank:WP_241956988.1;Name=WP_241956988.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01446.1;locus_tag=CYJ00_RS13650;product=DnaD domain-containing protein;protein_id=WP_241956988.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	26920	27702	.	+	.	ID=gene-CYJ00_RS09065;Name=CYJ00_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09065;old_locus_tag=CYJ00_009070
NZ_PJUS02000331.1	Protein Homology	CDS	26920	27702	.	+	0	ID=cds-WP_096636858.1;Parent=gene-CYJ00_RS09065;Dbxref=GenBank:WP_096636858.1;Name=WP_096636858.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236202.1;locus_tag=CYJ00_RS09065;product=ATP-binding protein;protein_id=WP_096636858.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	27866	28072	.	+	.	ID=gene-CYJ00_RS09070;Name=CYJ00_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09070;old_locus_tag=CYJ00_009075
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	27866	28072	.	+	0	ID=cds-WP_096636857.1;Parent=gene-CYJ00_RS09070;Dbxref=GenBank:WP_096636857.1;Name=WP_096636857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09070;product=hypothetical protein;protein_id=WP_096636857.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	28223	28993	.	+	.	ID=gene-CYJ00_RS09075;Name=CYJ00_RS09075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09075;old_locus_tag=CYJ00_009080;partial=true;pseudo=true;start_range=.,28223
NZ_PJUS02000331.1	Protein Homology	CDS	28223	28993	.	+	0	ID=cds-CYJ00_RS09075;Parent=gene-CYJ00_RS09075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469449.1;locus_tag=CYJ00_RS09075;partial=true;product=sugar-binding transcriptional regulator;pseudo=true;start_range=.,28223;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	29056	30039	.	+	.	ID=gene-CYJ00_RS09080;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CYJ00_RS09080;old_locus_tag=CYJ00_009085
NZ_PJUS02000331.1	Protein Homology	CDS	29056	30039	.	+	0	ID=cds-WP_103331976.1;Parent=gene-CYJ00_RS09080;Dbxref=GenBank:WP_103331976.1;Name=WP_103331976.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=CYJ00_RS09080;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_103331976.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	30109	30552	.	+	.	ID=gene-CYJ00_RS09085;Name=CYJ00_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09085;old_locus_tag=CYJ00_009090
NZ_PJUS02000331.1	Protein Homology	CDS	30109	30552	.	+	0	ID=cds-WP_037542073.1;Parent=gene-CYJ00_RS09085;Dbxref=GenBank:WP_037542073.1;Name=WP_037542073.1;Ontology_term=GO:0005506,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729781.1;locus_tag=CYJ00_RS09085;product=(4Fe-4S)-binding protein;protein_id=WP_037542073.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	30568	31458	.	+	.	ID=gene-CYJ00_RS09090;Name=CYJ00_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09090;old_locus_tag=CYJ00_009095
NZ_PJUS02000331.1	Protein Homology	CDS	30568	31458	.	+	0	ID=cds-WP_014612746.1;Parent=gene-CYJ00_RS09090;Dbxref=GenBank:WP_014612746.1;Name=WP_014612746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612746.1;locus_tag=CYJ00_RS09090;product=VOC family protein;protein_id=WP_014612746.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	31922	33490	.	-	.	ID=gene-CYJ00_RS09095;Name=CYJ00_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09095;old_locus_tag=CYJ00_009100
NZ_PJUS02000331.1	Protein Homology	CDS	31922	33490	.	-	0	ID=cds-WP_101458005.1;Parent=gene-CYJ00_RS09095;Dbxref=GenBank:WP_101458005.1;Name=WP_101458005.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165957.1;locus_tag=CYJ00_RS09095;product=FAD/NAD(P)-binding protein;protein_id=WP_101458005.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	33572	34480	.	+	.	ID=gene-CYJ00_RS09100;Name=CYJ00_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09100;old_locus_tag=CYJ00_009105;partial=true;pseudo=true;start_range=.,33572
NZ_PJUS02000331.1	Protein Homology	CDS	33572	34480	.	+	0	ID=cds-CYJ00_RS09100;Parent=gene-CYJ00_RS09100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613834.1;locus_tag=CYJ00_RS09100;partial=true;product=M24 family metallopeptidase;pseudo=true;start_range=.,33572;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	34499	35056	.	+	.	ID=gene-CYJ00_RS09105;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CYJ00_RS09105;old_locus_tag=CYJ00_009110
NZ_PJUS02000331.1	Protein Homology	CDS	34499	35056	.	+	0	ID=cds-WP_014613835.1;Parent=gene-CYJ00_RS09105;Dbxref=GenBank:WP_014613835.1;Name=WP_014613835.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=CYJ00_RS09105;product=elongation factor P;protein_id=WP_014613835.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	35383	36168	.	-	.	ID=gene-CYJ00_RS09110;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CYJ00_RS09110;old_locus_tag=CYJ00_009115
NZ_PJUS02000331.1	Protein Homology	CDS	35383	36168	.	-	0	ID=cds-WP_101457994.1;Parent=gene-CYJ00_RS09110;Dbxref=GenBank:WP_101457994.1;Name=WP_101457994.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=CYJ00_RS09110;product=ribonuclease HII;protein_id=WP_101457994.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	36161	37033	.	-	.	ID=gene-CYJ00_RS09115;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=CYJ00_RS09115;old_locus_tag=CYJ00_009120
NZ_PJUS02000331.1	Protein Homology	CDS	36161	37033	.	-	0	ID=cds-WP_015729037.1;Parent=gene-CYJ00_RS09115;Dbxref=GenBank:WP_015729037.1;Name=WP_015729037.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167874.1;locus_tag=CYJ00_RS09115;product=ribosome biogenesis GTPase YlqF;protein_id=WP_015729037.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	37032	37361	.	+	.	ID=gene-CYJ00_RS09120;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=CYJ00_RS09120;old_locus_tag=CYJ00_009125
NZ_PJUS02000331.1	Protein Homology	CDS	37032	37361	.	+	0	ID=cds-WP_274539984.1;Parent=gene-CYJ00_RS09120;Dbxref=GenBank:WP_274539984.1;Name=WP_274539984.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=CYJ00_RS09120;product=membrane stabilizing protein MspA;protein_id=WP_274539984.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	37501	38658	.	-	.	ID=gene-CYJ00_RS09125;Name=CYJ00_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09125;old_locus_tag=CYJ00_009130
NZ_PJUS02000331.1	Protein Homology	CDS	37501	38658	.	-	0	ID=cds-WP_014613203.1;Parent=gene-CYJ00_RS09125;Dbxref=GenBank:WP_014613203.1;Name=WP_014613203.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613203.1;locus_tag=CYJ00_RS09125;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014613203.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	38805	39572	.	+	.	ID=gene-CYJ00_RS09130;Name=CYJ00_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09130;old_locus_tag=CYJ00_009135
NZ_PJUS02000331.1	Protein Homology	CDS	38805	39572	.	+	0	ID=cds-WP_157939013.1;Parent=gene-CYJ00_RS09130;Dbxref=GenBank:WP_157939013.1;Name=WP_157939013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044870.3;locus_tag=CYJ00_RS09130;product=YncE family protein;protein_id=WP_157939013.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	40541	40963	.	+	.	ID=gene-CYJ00_RS09135;Name=fosB;gbkey=Gene;gene=fosB;gene_biotype=protein_coding;locus_tag=CYJ00_RS09135;old_locus_tag=CYJ00_009140
NZ_PJUS02000331.1	Protein Homology	CDS	40541	40963	.	+	0	ID=cds-WP_101458040.1;Parent=gene-CYJ00_RS09135;Dbxref=GenBank:WP_101458040.1;Name=WP_101458040.1;gbkey=CDS;gene=fosB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166891.1;locus_tag=CYJ00_RS09135;product=metallothiol transferase FosB;protein_id=WP_101458040.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	41055	41360	.	+	.	ID=gene-CYJ00_RS09140;Name=CYJ00_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09140;old_locus_tag=CYJ00_009145
NZ_PJUS02000331.1	Protein Homology	CDS	41055	41360	.	+	0	ID=cds-WP_101458041.1;Parent=gene-CYJ00_RS09140;Dbxref=GenBank:WP_101458041.1;Name=WP_101458041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166890.1;locus_tag=CYJ00_RS09140;product=nuclear transport factor 2 family protein;protein_id=WP_101458041.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	41465	42118	.	-	.	ID=gene-CYJ00_RS09145;Name=CYJ00_RS09145;end_range=42118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09145;old_locus_tag=CYJ00_009150;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	41465	42118	.	-	0	ID=cds-CYJ00_RS09145;Parent=gene-CYJ00_RS09145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=42118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614467.1;locus_tag=CYJ00_RS09145;partial=true;product=DUF1828 domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	42116	42421	.	+	.	ID=gene-CYJ00_RS09150;Name=CYJ00_RS09150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09150;old_locus_tag=CYJ00_009155;partial=true;pseudo=true;start_range=.,42116
NZ_PJUS02000331.1	Protein Homology	CDS	42116	42421	.	+	0	ID=cds-CYJ00_RS09150;Parent=gene-CYJ00_RS09150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165104.1;locus_tag=CYJ00_RS09150;partial=true;product=PEP-utilizing enzyme;pseudo=true;start_range=.,42116;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	42845	43789	.	+	.	ID=gene-CYJ00_RS09155;Name=CYJ00_RS09155;end_range=43789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09155;old_locus_tag=CYJ00_009160;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	42845	43789	.	+	0	ID=cds-CYJ00_RS09155;Parent=gene-CYJ00_RS09155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=43789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662816.1;locus_tag=CYJ00_RS09155;partial=true;product=citrate synthase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	43802	44194	.	+	.	ID=gene-CYJ00_RS13655;Name=CYJ00_RS13655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13655;partial=true;pseudo=true;start_range=.,43802
NZ_PJUS02000331.1	Protein Homology	CDS	43802	44194	.	+	0	ID=cds-CYJ00_RS13655;Parent=gene-CYJ00_RS13655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: protein motif:HMM:TIGR01768.1;locus_tag=CYJ00_RS13655;partial=true;product=geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase;pseudo=true;start_range=.,43802;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	44194	45450	.	+	.	ID=gene-CYJ00_RS09160;Name=CYJ00_RS09160;end_range=45450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09160;old_locus_tag=CYJ00_009165;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	44194	45450	.	+	0	ID=cds-CYJ00_RS09160;Parent=gene-CYJ00_RS09160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=45450,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=CYJ00_RS09160;partial=true;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	45705	46979	.	-	.	ID=gene-CYJ00_RS09165;Name=CYJ00_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09165;old_locus_tag=CYJ00_009170
NZ_PJUS02000331.1	Protein Homology	CDS	45705	46979	.	-	0	ID=cds-WP_096536214.1;Parent=gene-CYJ00_RS09165;Dbxref=GenBank:WP_096536214.1;Name=WP_096536214.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728936.1;locus_tag=CYJ00_RS09165;product=nucleotide sugar dehydrogenase;protein_id=WP_096536214.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	47193	48485	.	+	.	ID=gene-CYJ00_RS09170;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CYJ00_RS09170;old_locus_tag=CYJ00_009175
NZ_PJUS02000331.1	Protein Homology	CDS	47193	48485	.	+	0	ID=cds-WP_257784255.1;Parent=gene-CYJ00_RS09170;Dbxref=GenBank:WP_257784255.1;Name=WP_257784255.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=CYJ00_RS09170;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_257784255.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	48759	49883	.	+	.	ID=gene-CYJ00_RS09175;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=pseudogene;locus_tag=CYJ00_RS09175;old_locus_tag=CYJ00_009180;partial=true;pseudo=true;start_range=.,48759
NZ_PJUS02000331.1	Protein Homology	CDS	48759	49883	.	+	0	ID=cds-CYJ00_RS09175;Parent=gene-CYJ00_RS09175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=CYJ00_RS09175;partial=true;product=oligoendopeptidase F;pseudo=true;start_range=.,48759;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	50352	50690	.	-	.	ID=gene-CYJ00_RS09180;Name=CYJ00_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09180;old_locus_tag=CYJ00_009185
NZ_PJUS02000331.1	Protein Homology	CDS	50352	50690	.	-	0	ID=cds-WP_241956955.1;Parent=gene-CYJ00_RS09180;Dbxref=GenBank:WP_241956955.1;Name=WP_241956955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219834.1;locus_tag=CYJ00_RS09180;product=hypothetical protein;protein_id=WP_241956955.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	50766	51800	.	-	.	ID=gene-CYJ00_RS09185;Name=CYJ00_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09185;old_locus_tag=CYJ00_009190
NZ_PJUS02000331.1	Protein Homology	CDS	50766	51800	.	-	0	ID=cds-WP_423830917.1;Parent=gene-CYJ00_RS09185;Dbxref=GenBank:WP_423830917.1;Name=WP_423830917.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388593.1;locus_tag=CYJ00_RS09185;product=replication initiation factor domain-containing protein;protein_id=WP_423830917.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	52198	52347	.	-	.	ID=gene-CYJ00_RS09190;Name=CYJ00_RS09190;end_range=52347,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09190;old_locus_tag=CYJ00_009195;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	52198	52347	.	-	0	ID=cds-CYJ00_RS09190;Parent=gene-CYJ00_RS09190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=52347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ00_RS09190;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	52462	52788	.	+	.	ID=gene-CYJ00_RS13660;Name=CYJ00_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13660
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	52462	52788	.	+	0	ID=cds-WP_241538727.1;Parent=gene-CYJ00_RS13660;Dbxref=GenBank:WP_241538727.1;Name=WP_241538727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13660;product=hypothetical protein;protein_id=WP_241538727.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	53175	53696	.	+	.	ID=gene-CYJ00_RS13665;Name=CYJ00_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13665
NZ_PJUS02000331.1	Protein Homology	CDS	53175	53696	.	+	0	ID=cds-WP_241956956.1;Parent=gene-CYJ00_RS13665;Dbxref=GenBank:WP_241956956.1;Name=WP_241956956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046294.3;locus_tag=CYJ00_RS13665;product=Mu transposase domain-containing protein;protein_id=WP_241956956.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	53713	54279	.	-	.	ID=gene-CYJ00_RS09200;Name=CYJ00_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09200;old_locus_tag=CYJ00_009205
NZ_PJUS02000331.1	Protein Homology	CDS	53713	54279	.	-	0	ID=cds-WP_015729361.1;Parent=gene-CYJ00_RS09200;Dbxref=GenBank:WP_015729361.1;Name=WP_015729361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729361.1;locus_tag=CYJ00_RS09200;product=DUF3267 domain-containing protein;protein_id=WP_015729361.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	54328	54858	.	-	.	ID=gene-CYJ00_RS09205;Name=CYJ00_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09205;old_locus_tag=CYJ00_009210
NZ_PJUS02000331.1	Protein Homology	CDS	54328	54858	.	-	0	ID=cds-WP_014613551.1;Parent=gene-CYJ00_RS09205;Dbxref=GenBank:WP_014613551.1;Name=WP_014613551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=CYJ00_RS09205;product=HTH-type transcriptional regulator Hpr;protein_id=WP_014613551.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	54960	55316	.	-	.	ID=gene-CYJ00_RS09210;Name=CYJ00_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09210;old_locus_tag=CYJ00_009215
NZ_PJUS02000331.1	Protein Homology	CDS	54960	55316	.	-	0	ID=cds-WP_014613552.1;Parent=gene-CYJ00_RS09210;Dbxref=GenBank:WP_014613552.1;Name=WP_014613552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=CYJ00_RS09210;product=YtxH domain-containing protein;protein_id=WP_014613552.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	55359	55460	.	-	.	ID=gene-CYJ00_RS13000;Name=CYJ00_RS13000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13000;partial=true;pseudo=true;start_range=.,55359
NZ_PJUS02000331.1	Protein Homology	CDS	55359	55460	.	-	0	ID=cds-CYJ00_RS13000;Parent=gene-CYJ00_RS13000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276116.1;locus_tag=CYJ00_RS13000;partial=true;product=DUF1507 family protein;pseudo=true;start_range=.,55359;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	55597	56079	.	+	.	ID=gene-CYJ00_RS09215;Name=CYJ00_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09215;old_locus_tag=CYJ00_009220
NZ_PJUS02000331.1	Protein Homology	CDS	55597	56079	.	+	0	ID=cds-WP_014614231.1;Parent=gene-CYJ00_RS09215;Dbxref=GenBank:WP_014614231.1;Name=WP_014614231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168169.1;locus_tag=CYJ00_RS09215;product=hypothetical protein;protein_id=WP_014614231.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	56080	56283	.	+	.	ID=gene-CYJ00_RS09220;Name=CYJ00_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09220;old_locus_tag=CYJ00_009225
NZ_PJUS02000331.1	Protein Homology	CDS	56080	56283	.	+	0	ID=cds-WP_014614232.1;Parent=gene-CYJ00_RS09220;Dbxref=GenBank:WP_014614232.1;Name=WP_014614232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450673.1;locus_tag=CYJ00_RS09220;product=DUF2197 domain-containing protein;protein_id=WP_014614232.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	56407	58509	.	-	.	ID=gene-CYJ00_RS13965;Name=CYJ00_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13965;old_locus_tag=CYJ00_009230
NZ_PJUS02000331.1	Protein Homology	CDS	56407	58509	.	-	0	ID=cds-WP_103331980.1;Parent=gene-CYJ00_RS13965;Dbxref=GenBank:WP_103331980.1;Name=WP_103331980.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282612.1;locus_tag=CYJ00_RS13965;product=minor capsid protein;protein_id=WP_103331980.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	58616	60184	.	+	.	ID=gene-CYJ00_RS13970;Name=CYJ00_RS13970;end_range=60184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13970;old_locus_tag=CYJ00_009240;partial=true;pseudo=true;start_range=.,58616
NZ_PJUS02000331.1	Protein Homology	CDS	58616	60184	.	+	0	ID=cds-CYJ00_RS13970;Parent=gene-CYJ00_RS13970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=60184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044537.1;locus_tag=CYJ00_RS13970;partial=true;product=serine-rich repeat glycoprotein adhesin SasA;pseudo=true;start_range=.,58616;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	60305	61108	.	+	.	ID=gene-CYJ00_RS09240;Name=CYJ00_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09240;old_locus_tag=CYJ00_009245
NZ_PJUS02000331.1	Protein Homology	CDS	60305	61108	.	+	0	ID=cds-WP_101458021.1;Parent=gene-CYJ00_RS09240;Dbxref=GenBank:WP_101458021.1;Name=WP_101458021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=CYJ00_RS09240;product=carbon-nitrogen family hydrolase;protein_id=WP_101458021.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	61392	61472	.	-	.	ID=gene-CYJ00_RS13975;Name=CYJ00_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13975
NZ_PJUS02000331.1	Protein Homology	CDS	61392	61472	.	-	0	ID=cds-WP_110144734.1;Parent=gene-CYJ00_RS13975;Dbxref=GenBank:WP_110144734.1;Name=WP_110144734.1;Note=Members of this family are produced with retention of the N-formyl-methionine at the N-terminus.;Ontology_term=GO:0019836,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: protein motif:HMM:NF017210.7;locus_tag=CYJ00_RS13975;product=delta-lysin family phenol-soluble modulin;protein_id=WP_110144734.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	61856	62287	.	+	.	ID=gene-CYJ00_RS09245;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS09245;old_locus_tag=CYJ00_009250
NZ_PJUS02000331.1	Protein Homology	CDS	61856	62287	.	+	0	ID=cds-WP_014614186.1;Parent=gene-CYJ00_RS09245;Dbxref=GenBank:WP_014614186.1;Name=WP_014614186.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CYJ00_RS09245;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014614186.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	62305	63240	.	+	.	ID=gene-CYJ00_RS09250;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CYJ00_RS09250;old_locus_tag=CYJ00_009255
NZ_PJUS02000331.1	Protein Homology	CDS	62305	63240	.	+	0	ID=cds-WP_063284588.1;Parent=gene-CYJ00_RS09250;Dbxref=GenBank:WP_063284588.1;Name=WP_063284588.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CYJ00_RS09250;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_063284588.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	63259	63432	.	+	.	ID=gene-CYJ00_RS13675;Name=CYJ00_RS13675;end_range=63432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13675;old_locus_tag=CYJ00_009260;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	63259	63432	.	+	0	ID=cds-CYJ00_RS13675;Parent=gene-CYJ00_RS13675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=63432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446224.1;locus_tag=CYJ00_RS13675;partial=true;product=cell division protein FtsL;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	63484	63960	.	+	.	ID=gene-CYJ00_RS09260;Name=CYJ00_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09260;old_locus_tag=CYJ00_009265
NZ_PJUS02000331.1	Protein Homology	CDS	63484	63960	.	+	0	ID=cds-WP_041614880.1;Parent=gene-CYJ00_RS09260;Dbxref=GenBank:WP_041614880.1;Name=WP_041614880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=CYJ00_RS09260;product=hypothetical protein;protein_id=WP_041614880.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	64124	64852	.	-	.	ID=gene-CYJ00_RS09265;Name=CYJ00_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09265;old_locus_tag=CYJ00_009270
NZ_PJUS02000331.1	Protein Homology	CDS	64124	64852	.	-	0	ID=cds-WP_015729537.1;Parent=gene-CYJ00_RS09265;Dbxref=GenBank:WP_015729537.1;Name=WP_015729537.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729537.1;locus_tag=CYJ00_RS09265;product=CHAP domain-containing protein;protein_id=WP_015729537.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	65048	65272	.	+	.	ID=gene-CYJ00_RS09270;Name=CYJ00_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09270;old_locus_tag=CYJ00_009275
NZ_PJUS02000331.1	Protein Homology	CDS	65048	65272	.	+	0	ID=cds-WP_014613594.1;Parent=gene-CYJ00_RS09270;Dbxref=GenBank:WP_014613594.1;Name=WP_014613594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500397.1;locus_tag=CYJ00_RS09270;product=hypothetical protein;protein_id=WP_014613594.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	65429	66292	.	+	.	ID=gene-CYJ00_RS09275;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=CYJ00_RS09275;old_locus_tag=CYJ00_009280
NZ_PJUS02000331.1	Protein Homology	CDS	65429	66292	.	+	0	ID=cds-WP_014613595.1;Parent=gene-CYJ00_RS09275;Dbxref=GenBank:WP_014613595.1;Name=WP_014613595.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=CYJ00_RS09275;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_014613595.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	66632	66886	.	+	.	ID=gene-CYJ00_RS09280;Name=CYJ00_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09280;old_locus_tag=CYJ00_009285
NZ_PJUS02000331.1	Protein Homology	CDS	66632	66886	.	+	0	ID=cds-WP_014614552.1;Parent=gene-CYJ00_RS09280;Dbxref=GenBank:WP_014614552.1;Name=WP_014614552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424461.1;locus_tag=CYJ00_RS09280;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_014614552.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	67059	68039	.	-	.	ID=gene-CYJ00_RS09285;Name=CYJ00_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09285;old_locus_tag=CYJ00_009290
NZ_PJUS02000331.1	Protein Homology	CDS	67059	68039	.	-	0	ID=cds-WP_101458002.1;Parent=gene-CYJ00_RS09285;Dbxref=GenBank:WP_101458002.1;Name=WP_101458002.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=CYJ00_RS09285;product=glycosyltransferase family 2 protein;protein_id=WP_101458002.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	68228	68413	.	-	.	ID=gene-CYJ00_RS09290;Name=CYJ00_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09290;old_locus_tag=CYJ00_009295
NZ_PJUS02000331.1	Protein Homology	CDS	68228	68413	.	-	0	ID=cds-WP_014613736.1;Parent=gene-CYJ00_RS09290;Dbxref=GenBank:WP_014613736.1;Name=WP_014613736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613736.1;locus_tag=CYJ00_RS09290;product=CsbD family protein;protein_id=WP_014613736.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	68481	69311	.	-	.	ID=gene-CYJ00_RS09295;Name=CYJ00_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09295;old_locus_tag=CYJ00_009300
NZ_PJUS02000331.1	Protein Homology	CDS	68481	69311	.	-	0	ID=cds-WP_020219746.1;Parent=gene-CYJ00_RS09295;Dbxref=GenBank:WP_020219746.1;Name=WP_020219746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=CYJ00_RS09295;product=aldo/keto reductase;protein_id=WP_020219746.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	69352	69771	.	-	.	ID=gene-CYJ00_RS09300;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=CYJ00_RS09300;old_locus_tag=CYJ00_009305
NZ_PJUS02000331.1	Protein Homology	CDS	69352	69771	.	-	0	ID=cds-WP_103331981.1;Parent=gene-CYJ00_RS09300;Dbxref=GenBank:WP_103331981.1;Name=WP_103331981.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CYJ00_RS09300;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_103331981.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	69782	70135	.	-	.	ID=gene-CYJ00_RS09305;Name=CYJ00_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09305;old_locus_tag=CYJ00_009310
NZ_PJUS02000331.1	Protein Homology	CDS	69782	70135	.	-	0	ID=cds-WP_014613168.1;Parent=gene-CYJ00_RS09305;Dbxref=GenBank:WP_014613168.1;Name=WP_014613168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=CYJ00_RS09305;product=DoxX family protein;protein_id=WP_014613168.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	70149	71201	.	-	.	ID=gene-CYJ00_RS09310;Name=CYJ00_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09310;old_locus_tag=CYJ00_009315
NZ_PJUS02000331.1	Protein Homology	CDS	70149	71201	.	-	0	ID=cds-WP_014613167.1;Parent=gene-CYJ00_RS09310;Dbxref=GenBank:WP_014613167.1;Name=WP_014613167.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=CYJ00_RS09310;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613167.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	71399	72703	.	+	.	ID=gene-CYJ00_RS09315;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CYJ00_RS09315;old_locus_tag=CYJ00_009320
NZ_PJUS02000331.1	Protein Homology	CDS	71399	72703	.	+	0	ID=cds-WP_014614479.1;Parent=gene-CYJ00_RS09315;Dbxref=GenBank:WP_014614479.1;Name=WP_014614479.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CYJ00_RS09315;product=surface-displayed alpha-enolase;protein_id=WP_014614479.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	72875	74293	.	-	.	ID=gene-CYJ00_RS09320;Name=CYJ00_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09320;old_locus_tag=CYJ00_009325
NZ_PJUS02000331.1	Protein Homology	CDS	72875	74293	.	-	0	ID=cds-WP_103331982.1;Parent=gene-CYJ00_RS09320;Dbxref=GenBank:WP_103331982.1;Name=WP_103331982.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613650.1;locus_tag=CYJ00_RS09320;product=minor capsid protein;protein_id=WP_103331982.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	74390	74722	.	-	.	ID=gene-CYJ00_RS09325;Name=icaD;gbkey=Gene;gene=icaD;gene_biotype=protein_coding;locus_tag=CYJ00_RS09325;old_locus_tag=CYJ00_009330
NZ_PJUS02000331.1	Protein Homology	CDS	74390	74722	.	-	0	ID=cds-WP_133158343.1;Parent=gene-CYJ00_RS09325;Dbxref=GenBank:WP_133158343.1;Name=WP_133158343.1;Ontology_term=GO:0000271,GO:0008375,GO:0005886;gbkey=CDS;gene=icaD;go_component=plasma membrane|0005886||IEA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: protein motif:HMM:NF054961.1;locus_tag=CYJ00_RS09325;product=intracellular adhesion protein IcaD;protein_id=WP_133158343.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	74689	75915	.	-	.	ID=gene-CYJ00_RS09330;Name=icaA;gbkey=Gene;gene=icaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS09330;old_locus_tag=CYJ00_009335
NZ_PJUS02000331.1	Protein Homology	CDS	74689	75915	.	-	0	ID=cds-WP_014612785.1;Parent=gene-CYJ00_RS09330;Dbxref=GenBank:WP_014612785.1;Name=WP_014612785.1;gbkey=CDS;gene=icaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612785.1;locus_tag=CYJ00_RS09330;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase IcaA;protein_id=WP_014612785.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	76019	76201	.	-	.	ID=gene-CYJ00_RS09335;Name=CYJ00_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09335;old_locus_tag=CYJ00_009340
NZ_PJUS02000331.1	Protein Homology	CDS	76019	76201	.	-	0	ID=cds-WP_014614228.1;Parent=gene-CYJ00_RS09335;Dbxref=GenBank:WP_014614228.1;Name=WP_014614228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614228.1;locus_tag=CYJ00_RS09335;product=hypothetical protein;protein_id=WP_014614228.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	76379	77518	.	-	.	ID=gene-CYJ00_RS13280;Name=CYJ00_RS13280;end_range=77518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13280;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	76379	77518	.	-	0	ID=cds-CYJ00_RS13280;Parent=gene-CYJ00_RS13280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;end_range=77518,.;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168168.1;locus_tag=CYJ00_RS13280;partial=true;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	77552	78376	.	-	.	ID=gene-CYJ00_RS13285;Name=CYJ00_RS13285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13285;partial=true;pseudo=true;start_range=.,77552
NZ_PJUS02000331.1	Protein Homology	CDS	77552	78376	.	-	0	ID=cds-CYJ00_RS13285;Parent=gene-CYJ00_RS13285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.7;locus_tag=CYJ00_RS13285;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,77552;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	78645	79019	.	-	.	ID=gene-CYJ00_RS09345;Name=CYJ00_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09345;old_locus_tag=CYJ00_009350
NZ_PJUS02000331.1	Protein Homology	CDS	78645	79019	.	-	0	ID=cds-WP_423830918.1;Parent=gene-CYJ00_RS09345;Dbxref=GenBank:WP_423830918.1;Name=WP_423830918.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=CYJ00_RS09345;product=YbaN family protein;protein_id=WP_423830918.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	79017	79979	.	+	.	ID=gene-CYJ00_RS09350;Name=CYJ00_RS09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09350;old_locus_tag=CYJ00_009355;partial=true;pseudo=true;start_range=.,79017
NZ_PJUS02000331.1	Protein Homology	CDS	79017	79979	.	+	0	ID=cds-CYJ00_RS09350;Parent=gene-CYJ00_RS09350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388733.1;locus_tag=CYJ00_RS09350;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,79017;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	80047	80508	.	-	.	ID=gene-CYJ00_RS09355;Name=CYJ00_RS09355;end_range=80508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09355;old_locus_tag=CYJ00_009360;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	80047	80508	.	-	0	ID=cds-CYJ00_RS09355;Parent=gene-CYJ00_RS09355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006164,GO:0006177,GO:0003922,GO:0005524;end_range=80508,.;gbkey=CDS;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ00_RS09355;partial=true;product=GMP synthase (glutamine-hydrolyzing);pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	80492	81859	.	+	.	ID=gene-CYJ00_RS09360;Name=CYJ00_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09360;old_locus_tag=CYJ00_009365
NZ_PJUS02000331.1	Protein Homology	CDS	80492	81859	.	+	0	ID=cds-WP_274539980.1;Parent=gene-CYJ00_RS09360;Dbxref=GenBank:WP_274539980.1;Name=WP_274539980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.7;locus_tag=CYJ00_RS09360;product=coagulase domain-containing protein;protein_id=WP_274539980.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	81986	83494	.	+	.	ID=gene-CYJ00_RS09365;Name=CYJ00_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09365;old_locus_tag=CYJ00_009370
NZ_PJUS02000331.1	Protein Homology	CDS	81986	83494	.	+	0	ID=cds-WP_103331986.1;Parent=gene-CYJ00_RS09365;Dbxref=GenBank:WP_103331986.1;Name=WP_103331986.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=CYJ00_RS09365;product=aldehyde dehydrogenase family protein;protein_id=WP_103331986.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	83436	84845	.	-	.	ID=gene-CYJ00_RS09370;Name=CYJ00_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09370;old_locus_tag=CYJ00_009375
NZ_PJUS02000331.1	Protein Homology	CDS	83436	84845	.	-	0	ID=cds-WP_103331987.1;Parent=gene-CYJ00_RS09370;Dbxref=GenBank:WP_103331987.1;Name=WP_103331987.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424702.1;locus_tag=CYJ00_RS09370;product=acyltransferase family protein;protein_id=WP_103331987.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	85197	86351	.	+	.	ID=gene-CYJ00_RS09375;Name=spsM;end_range=86351,.;gbkey=Gene;gene=spsM;gene_biotype=pseudogene;locus_tag=CYJ00_RS09375;old_locus_tag=CYJ00_009380;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	85197	86351	.	+	0	ID=cds-CYJ00_RS09375;Parent=gene-CYJ00_RS09375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=86351,.;gbkey=CDS;gene=spsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612726.1;locus_tag=CYJ00_RS09375;partial=true;product=LPXTG-anchored surface protein SpsM;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	86448	86600	.	+	.	ID=gene-CYJ00_RS13980;Name=CYJ00_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13980
NZ_PJUS02000331.1	Protein Homology	CDS	86448	86600	.	+	0	ID=cds-WP_191088420.1;Parent=gene-CYJ00_RS13980;Dbxref=GenBank:WP_191088420.1;Name=WP_191088420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071310.1;locus_tag=CYJ00_RS13980;product=XRE family transcriptional regulator;protein_id=WP_191088420.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	86700	86788	.	-	.	ID=gene-CYJ00_RS09380;Name=CYJ00_RS09380;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09380;old_locus_tag=CYJ00_009385
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	86700	86788	.	-	.	ID=rna-CYJ00_RS09380;Parent=gene-CYJ00_RS09380;anticodon=(pos:complement(86751..86753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09380;product=tRNA-Ser
NZ_PJUS02000331.1	tRNAscan-SE	exon	86700	86788	.	-	.	ID=exon-CYJ00_RS09380-1;Parent=rna-CYJ00_RS09380;anticodon=(pos:complement(86751..86753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09380;product=tRNA-Ser
NZ_PJUS02000331.1	RefSeq	gene	86790	86864	.	-	.	ID=gene-CYJ00_RS09385;Name=CYJ00_RS09385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09385;old_locus_tag=CYJ00_009390
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	86790	86864	.	-	.	ID=rna-CYJ00_RS09385;Parent=gene-CYJ00_RS09385;anticodon=(pos:complement(86830..86832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09385;product=tRNA-Asn
NZ_PJUS02000331.1	tRNAscan-SE	exon	86790	86864	.	-	.	ID=exon-CYJ00_RS09385-1;Parent=rna-CYJ00_RS09385;anticodon=(pos:complement(86830..86832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09385;product=tRNA-Asn
NZ_PJUS02000331.1	RefSeq	gene	87077	87694	.	-	.	ID=gene-CYJ00_RS09390;Name=CYJ00_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09390;old_locus_tag=CYJ00_009395
NZ_PJUS02000331.1	Protein Homology	CDS	87077	87694	.	-	0	ID=cds-WP_015728925.1;Parent=gene-CYJ00_RS09390;Dbxref=GenBank:WP_015728925.1;Name=WP_015728925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614331.1;locus_tag=CYJ00_RS09390;product=competence protein ComK;protein_id=WP_015728925.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	87863	89134	.	-	.	ID=gene-CYJ00_RS09395;Name=CYJ00_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09395;old_locus_tag=CYJ00_009400
NZ_PJUS02000331.1	Protein Homology	CDS	87863	89134	.	-	0	ID=cds-WP_014613733.1;Parent=gene-CYJ00_RS09395;Dbxref=GenBank:WP_014613733.1;Name=WP_014613733.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165155.1;locus_tag=CYJ00_RS09395;product=replication-associated recombination protein A;protein_id=WP_014613733.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	sequence_feature	89167	89367	.	+	.	ID=id-NZ_PJUS02000331.1:89167..89367;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUS02000331.1	RefSeq	sequence_feature	89469	90609	.	+	.	ID=id-NZ_PJUS02000331.1:89469..90609;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUS02000331.1	RefSeq	gene	90616	91539	.	+	.	ID=gene-CYJ00_RS09400;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=CYJ00_RS09400;old_locus_tag=CYJ00_009405
NZ_PJUS02000331.1	Protein Homology	CDS	90616	91539	.	+	0	ID=cds-WP_241956958.1;Parent=gene-CYJ00_RS09400;Dbxref=GenBank:WP_241956958.1;Name=WP_241956958.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676801.1;locus_tag=CYJ00_RS09400;product=sphingomyelin phosphodiesterase;protein_id=WP_241956958.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	92038	93033	.	-	.	ID=gene-CYJ00_RS09405;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=CYJ00_RS09405;old_locus_tag=CYJ00_009410
NZ_PJUS02000331.1	Protein Homology	CDS	92038	93033	.	-	0	ID=cds-WP_014613783.1;Parent=gene-CYJ00_RS09405;Dbxref=GenBank:WP_014613783.1;Name=WP_014613783.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613783.1;locus_tag=CYJ00_RS09405;product=flotillin-like protein FloA;protein_id=WP_014613783.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	93052	93426	.	-	.	ID=gene-CYJ00_RS09410;Name=CYJ00_RS09410;end_range=93426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09410;old_locus_tag=CYJ00_009415;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	93052	93426	.	-	0	ID=cds-CYJ00_RS09410;Parent=gene-CYJ00_RS09410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275638.1;locus_tag=CYJ00_RS09410;partial=true;product=NfeD family protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	93460	94872	.	+	.	ID=gene-CYJ00_RS09415;Name=CYJ00_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09415;old_locus_tag=CYJ00_009420
NZ_PJUS02000331.1	Protein Homology	CDS	93460	94872	.	+	0	ID=cds-WP_103331988.1;Parent=gene-CYJ00_RS09415;Dbxref=GenBank:WP_103331988.1;Name=WP_103331988.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF019850.7;locus_tag=CYJ00_RS09415;product=Mur ligase family protein;protein_id=WP_103331988.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	95572	95982	.	+	.	ID=gene-CYJ00_RS09420;Name=CYJ00_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09420;old_locus_tag=CYJ00_009425
NZ_PJUS02000331.1	Protein Homology	CDS	95572	95982	.	+	0	ID=cds-WP_015728586.1;Parent=gene-CYJ00_RS09420;Dbxref=GenBank:WP_015728586.1;Name=WP_015728586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728586.1;locus_tag=CYJ00_RS09420;product=hypothetical protein;protein_id=WP_015728586.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	sequence_feature	96245	97110	.	-	.	ID=id-NZ_PJUS02000331.1:96245..97110;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUS02000331.1	RefSeq	sequence_feature	97114	97831	.	-	.	ID=id-NZ_PJUS02000331.1:97114..97831;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUS02000331.1	RefSeq	gene	97824	98906	.	-	.	ID=gene-CYJ00_RS09425;Name=CYJ00_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09425;old_locus_tag=CYJ00_009435
NZ_PJUS02000331.1	Protein Homology	CDS	97824	98906	.	-	0	ID=cds-WP_014614738.1;Parent=gene-CYJ00_RS09425;Dbxref=GenBank:WP_014614738.1;Name=WP_014614738.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166637.1;locus_tag=CYJ00_RS09425;product=branched-chain amino acid aminotransferase;protein_id=WP_014614738.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	99089	99772	.	+	.	ID=gene-CYJ00_RS09435;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CYJ00_RS09435;old_locus_tag=CYJ00_009445
NZ_PJUS02000331.1	Protein Homology	CDS	99089	99772	.	+	0	ID=cds-WP_101458034.1;Parent=gene-CYJ00_RS09435;Dbxref=GenBank:WP_101458034.1;Name=WP_101458034.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=CYJ00_RS09435;product=RadC family protein;protein_id=WP_101458034.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	100011	100166	.	-	.	ID=gene-CYJ00_RS13290;Name=CYJ00_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13290
NZ_PJUS02000331.1	Protein Homology	CDS	100011	100166	.	-	0	ID=cds-WP_015729275.1;Parent=gene-CYJ00_RS13290;Dbxref=GenBank:WP_015729275.1;Name=WP_015729275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729275.1;locus_tag=CYJ00_RS13290;product=hypothetical protein;protein_id=WP_015729275.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	100308	100979	.	+	.	ID=gene-CYJ00_RS09440;Name=CYJ00_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09440;old_locus_tag=CYJ00_009450
NZ_PJUS02000331.1	Protein Homology	CDS	100308	100979	.	+	0	ID=cds-WP_241956959.1;Parent=gene-CYJ00_RS09440;Dbxref=GenBank:WP_241956959.1;Name=WP_241956959.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.7;locus_tag=CYJ00_RS09440;product=cytochrome P450;protein_id=WP_241956959.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	101156	101635	.	-	.	ID=gene-CYJ00_RS09445;Name=CYJ00_RS09445;end_range=101635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09445;old_locus_tag=CYJ00_009455;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	101156	101635	.	-	0	ID=cds-CYJ00_RS09445;Parent=gene-CYJ00_RS09445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=101635,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ00_RS09445;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	101637	102356	.	+	.	ID=gene-CYJ00_RS09450;Name=CYJ00_RS09450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09450;old_locus_tag=CYJ00_009460;partial=true;pseudo=true;start_range=.,101637
NZ_PJUS02000331.1	Protein Homology	CDS	101637	102356	.	+	0	ID=cds-CYJ00_RS09450;Parent=gene-CYJ00_RS09450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613567.1;locus_tag=CYJ00_RS09450;partial=true;product=beta-channel forming cytolysin;pseudo=true;start_range=.,101637;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	102415	102936	.	-	.	ID=gene-CYJ00_RS09455;Name=CYJ00_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09455;old_locus_tag=CYJ00_009465
NZ_PJUS02000331.1	Protein Homology	CDS	102415	102936	.	-	0	ID=cds-WP_101458037.1;Parent=gene-CYJ00_RS09455;Dbxref=GenBank:WP_101458037.1;Name=WP_101458037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219671.1;locus_tag=CYJ00_RS09455;product=DUF4355 domain-containing protein;protein_id=WP_101458037.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	103166	103972	.	-	.	ID=gene-CYJ00_RS09460;Name=CYJ00_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09460;old_locus_tag=CYJ00_009470
NZ_PJUS02000331.1	Protein Homology	CDS	103166	103972	.	-	0	ID=cds-WP_096536008.1;Parent=gene-CYJ00_RS09460;Dbxref=GenBank:WP_096536008.1;Name=WP_096536008.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729750.1;locus_tag=CYJ00_RS09460;product=arylamine N-acetyltransferase family protein;protein_id=WP_096536008.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	104334	105077	.	+	.	ID=gene-CYJ00_RS09465;Name=CYJ00_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09465;old_locus_tag=CYJ00_009475
NZ_PJUS02000331.1	Protein Homology	CDS	104334	105077	.	+	0	ID=cds-WP_015729316.1;Parent=gene-CYJ00_RS09465;Dbxref=GenBank:WP_015729316.1;Name=WP_015729316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015598.7;locus_tag=CYJ00_RS09465;product=MAP domain-containing protein;protein_id=WP_015729316.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	105270	105596	.	+	.	ID=gene-CYJ00_RS09470;Name=CYJ00_RS09470;end_range=105596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09470;old_locus_tag=CYJ00_009480;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	105270	105596	.	+	0	ID=cds-CYJ00_RS09470;Parent=gene-CYJ00_RS09470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=105596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ00_RS09470;partial=true;product=capsid assembly scaffolding protein Gp46 family protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	105630	106136	.	-	.	ID=gene-CYJ00_RS09475;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=CYJ00_RS09475;old_locus_tag=CYJ00_009485
NZ_PJUS02000331.1	Protein Homology	CDS	105630	106136	.	-	0	ID=cds-WP_015729076.1;Parent=gene-CYJ00_RS09475;Dbxref=GenBank:WP_015729076.1;Name=WP_015729076.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=CYJ00_RS09475;product=thermonuclease NucI;protein_id=WP_015729076.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	106276	106473	.	+	.	ID=gene-CYJ00_RS09480;Name=CYJ00_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09480;old_locus_tag=CYJ00_009490
NZ_PJUS02000331.1	Protein Homology	CDS	106276	106473	.	+	0	ID=cds-WP_014614007.1;Parent=gene-CYJ00_RS09480;Dbxref=GenBank:WP_014614007.1;Name=WP_014614007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=CYJ00_RS09480;product=hypothetical protein;protein_id=WP_014614007.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	106901	107098	.	+	.	ID=gene-CYJ00_RS09485;Name=CYJ00_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09485;old_locus_tag=CYJ00_009495
NZ_PJUS02000331.1	Protein Homology	CDS	106901	107098	.	+	0	ID=cds-WP_014614384.1;Parent=gene-CYJ00_RS09485;Dbxref=GenBank:WP_014614384.1;Name=WP_014614384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614384.1;locus_tag=CYJ00_RS09485;product=DUF2929 family protein;protein_id=WP_014614384.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	107249	108154	.	-	.	ID=gene-CYJ00_RS09490;Name=CYJ00_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09490;old_locus_tag=CYJ00_009500
NZ_PJUS02000331.1	Protein Homology	CDS	107249	108154	.	-	0	ID=cds-WP_101458028.1;Parent=gene-CYJ00_RS09490;Dbxref=GenBank:WP_101458028.1;Name=WP_101458028.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614385.1;locus_tag=CYJ00_RS09490;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_101458028.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	108202	108534	.	-	.	ID=gene-CYJ00_RS09495;Name=CYJ00_RS09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09495;old_locus_tag=CYJ00_009505;partial=true;pseudo=true;start_range=.,108202
NZ_PJUS02000331.1	Protein Homology	CDS	108202	108534	.	-	0	ID=cds-CYJ00_RS09495;Parent=gene-CYJ00_RS09495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171926.1;locus_tag=CYJ00_RS09495;partial=true;product=DUF4242 domain-containing protein;pseudo=true;start_range=.,108202;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	108761	109216	.	+	.	ID=gene-CYJ00_RS09500;Name=CYJ00_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09500;old_locus_tag=CYJ00_009510
NZ_PJUS02000331.1	Protein Homology	CDS	108761	109216	.	+	0	ID=cds-WP_096536573.1;Parent=gene-CYJ00_RS09500;Dbxref=GenBank:WP_096536573.1;Name=WP_096536573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220171.1;locus_tag=CYJ00_RS09500;product=P-loop NTPase family protein;protein_id=WP_096536573.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	109488	109766	.	-	.	ID=gene-CYJ00_RS09505;Name=CYJ00_RS09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09505;old_locus_tag=CYJ00_009515;partial=true;pseudo=true;start_range=.,109488
NZ_PJUS02000331.1	Protein Homology	CDS	109488	109766	.	-	0	ID=cds-CYJ00_RS09505;Parent=gene-CYJ00_RS09505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456490.1;locus_tag=CYJ00_RS09505;partial=true;product=penicillin-binding protein 2;pseudo=true;start_range=.,109488;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	110059	110658	.	-	.	ID=gene-CYJ00_RS09510;Name=CYJ00_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09510;old_locus_tag=CYJ00_009520
NZ_PJUS02000331.1	Protein Homology	CDS	110059	110658	.	-	0	ID=cds-WP_014613806.1;Parent=gene-CYJ00_RS09510;Dbxref=GenBank:WP_014613806.1;Name=WP_014613806.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=CYJ00_RS09510;product=superoxide dismutase;protein_id=WP_014613806.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	110762	112045	.	+	.	ID=gene-CYJ00_RS13680;Name=CYJ00_RS13680;end_range=112045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13680;old_locus_tag=CYJ00_009525;partial=true;pseudo=true;start_range=.,110762
NZ_PJUS02000331.1	Protein Homology	CDS	110762	112045	.	+	0	ID=cds-CYJ00_RS13680;Parent=gene-CYJ00_RS13680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=112045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS13680;partial=true;product=accessory Sec-dependent LPXTG-anchored adhesin;pseudo=true;start_range=.,110762;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	112106	112660	.	+	.	ID=gene-CYJ00_RS09520;Name=CYJ00_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09520;old_locus_tag=CYJ00_009530
NZ_PJUS02000331.1	Protein Homology	CDS	112106	112660	.	+	0	ID=cds-WP_015729355.1;Parent=gene-CYJ00_RS09520;Dbxref=GenBank:WP_015729355.1;Name=WP_015729355.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=CYJ00_RS09520;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_015729355.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	113003	113074	.	+	.	ID=gene-CYJ00_RS09525;Name=CYJ00_RS09525;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09525;old_locus_tag=CYJ00_009535
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	113003	113074	.	+	.	ID=rna-CYJ00_RS09525;Parent=gene-CYJ00_RS09525;anticodon=(pos:113036..113038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09525;product=tRNA-Glu
NZ_PJUS02000331.1	tRNAscan-SE	exon	113003	113074	.	+	.	ID=exon-CYJ00_RS09525-1;Parent=rna-CYJ00_RS09525;anticodon=(pos:113036..113038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09525;product=tRNA-Glu
NZ_PJUS02000331.1	RefSeq	gene	113185	113258	.	+	.	ID=gene-CYJ00_RS09530;Name=CYJ00_RS09530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09530;old_locus_tag=CYJ00_009540
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	113185	113258	.	+	.	ID=rna-CYJ00_RS09530;Parent=gene-CYJ00_RS09530;anticodon=(pos:113219..113221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09530;product=tRNA-Met
NZ_PJUS02000331.1	tRNAscan-SE	exon	113185	113258	.	+	.	ID=exon-CYJ00_RS09530-1;Parent=rna-CYJ00_RS09530;anticodon=(pos:113219..113221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09530;product=tRNA-Met
NZ_PJUS02000331.1	RefSeq	gene	113279	113344	.	+	.	ID=gene-CYJ00_RS09535;Name=CYJ00_RS09535;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09535;old_locus_tag=CYJ00_009545
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	113279	113344	.	+	.	ID=rna-CYJ00_RS09535;Parent=gene-CYJ00_RS09535;anticodon=(pos:113307..113309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09535;product=tRNA-Asp
NZ_PJUS02000331.1	tRNAscan-SE	exon	113279	113344	.	+	.	ID=exon-CYJ00_RS09535-1;Parent=rna-CYJ00_RS09535;anticodon=(pos:113307..113309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09535;product=tRNA-Asp
NZ_PJUS02000331.1	RefSeq	pseudogene	113339	114157	.	+	.	ID=gene-CYJ00_RS09540;Name=CYJ00_RS09540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09540;old_locus_tag=CYJ00_009550;partial=true;pseudo=true;start_range=.,113339
NZ_PJUS02000331.1	Protein Homology	CDS	113339	114157	.	+	0	ID=cds-CYJ00_RS09540;Parent=gene-CYJ00_RS09540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499784.1;locus_tag=CYJ00_RS09540;partial=true;product=S1 RNA-binding domain-containing protein;pseudo=true;start_range=.,113339;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	114731	115348	.	+	.	ID=gene-CYJ00_RS09545;Name=CYJ00_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09545;old_locus_tag=CYJ00_009555
NZ_PJUS02000331.1	Protein Homology	CDS	114731	115348	.	+	0	ID=cds-WP_101458007.1;Parent=gene-CYJ00_RS09545;Dbxref=GenBank:WP_101458007.1;Name=WP_101458007.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016988.7;locus_tag=CYJ00_RS09545;product=phage portal protein;protein_id=WP_101458007.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	115332	115868	.	+	.	ID=gene-CYJ00_RS09550;Name=CYJ00_RS09550;end_range=115868,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09550;old_locus_tag=CYJ00_009560;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	115332	115868	.	+	0	ID=cds-CYJ00_RS09550;Parent=gene-CYJ00_RS09550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=115868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613650.1;locus_tag=CYJ00_RS09550;partial=true;product=phage head morphogenesis protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	115935	116639	.	+	.	ID=gene-CYJ00_RS09555;Name=CYJ00_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09555;old_locus_tag=CYJ00_009565
NZ_PJUS02000331.1	Protein Homology	CDS	115935	116639	.	+	0	ID=cds-WP_070407811.1;Parent=gene-CYJ00_RS09555;Dbxref=GenBank:WP_070407811.1;Name=WP_070407811.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=CYJ00_RS09555;product=response regulator transcription factor;protein_id=WP_070407811.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	116640	117209	.	+	.	ID=gene-CYJ00_RS09560;Name=CYJ00_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09560;old_locus_tag=CYJ00_009570
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	116640	117209	.	+	0	ID=cds-WP_241956961.1;Parent=gene-CYJ00_RS09560;Dbxref=GenBank:WP_241956961.1;Name=WP_241956961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09560;product=hypothetical protein;protein_id=WP_241956961.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	117178	117576	.	+	.	ID=gene-CYJ00_RS09565;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CYJ00_RS09565;old_locus_tag=CYJ00_009575
NZ_PJUS02000331.1	Protein Homology	CDS	117178	117576	.	+	0	ID=cds-WP_014614622.1;Parent=gene-CYJ00_RS09565;Dbxref=GenBank:WP_014614622.1;Name=WP_014614622.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CYJ00_RS09565;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_014614622.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	118423	118737	.	-	.	ID=gene-CYJ00_RS09570;Name=queF;gbkey=Gene;gene=queF;gene_biotype=pseudogene;locus_tag=CYJ00_RS09570;old_locus_tag=CYJ00_009580;partial=true;pseudo=true;start_range=.,118423
NZ_PJUS02000331.1	Protein Homology	CDS	118423	118737	.	-	0	ID=cds-CYJ00_RS09570;Parent=gene-CYJ00_RS09570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CYJ00_RS09570;partial=true;product=preQ(1) synthase;pseudo=true;start_range=.,118423;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	118757	119638	.	-	.	ID=gene-CYJ00_RS09575;Name=CYJ00_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09575;old_locus_tag=CYJ00_009585
NZ_PJUS02000331.1	Protein Homology	CDS	118757	119638	.	-	0	ID=cds-WP_014614525.1;Parent=gene-CYJ00_RS09575;Dbxref=GenBank:WP_014614525.1;Name=WP_014614525.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614525.1;locus_tag=CYJ00_RS09575;product=DMT family transporter;protein_id=WP_014614525.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	119724	120593	.	-	.	ID=gene-CYJ00_RS09580;Name=CYJ00_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09580;old_locus_tag=CYJ00_009590
NZ_PJUS02000331.1	Protein Homology	CDS	119724	120593	.	-	0	ID=cds-WP_014614005.1;Parent=gene-CYJ00_RS09580;Dbxref=GenBank:WP_014614005.1;Name=WP_014614005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614005.1;locus_tag=CYJ00_RS09580;product=hypothetical protein;protein_id=WP_014614005.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	121024	122154	.	-	.	ID=gene-CYJ00_RS09585;Name=CYJ00_RS09585;end_range=122154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09585;old_locus_tag=CYJ00_009595;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	121024	122154	.	-	0	ID=cds-CYJ00_RS09585;Parent=gene-CYJ00_RS09585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004329,GO:0005524;end_range=122154,.;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CYJ00_RS09585;partial=true;product=formate--tetrahydrofolate ligase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	122201	122686	.	-	.	ID=gene-CYJ00_RS09590;Name=CYJ00_RS09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09590;old_locus_tag=CYJ00_009600;partial=true;pseudo=true;start_range=.,122201
NZ_PJUS02000331.1	Protein Homology	CDS	122201	122686	.	-	0	ID=cds-CYJ00_RS09590;Parent=gene-CYJ00_RS09590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS09590;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,122201;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	123667	124527	.	-	.	ID=gene-CYJ00_RS09595;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=CYJ00_RS09595;old_locus_tag=CYJ00_009605
NZ_PJUS02000331.1	Protein Homology	CDS	123667	124527	.	-	0	ID=cds-WP_063284815.1;Parent=gene-CYJ00_RS09595;Dbxref=GenBank:WP_063284815.1;Name=WP_063284815.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614448.1;locus_tag=CYJ00_RS09595;product=polyprenyl-phosphate transporter PopT;protein_id=WP_063284815.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	124582	124707	.	+	.	ID=gene-CYJ00_RS13010;Name=CYJ00_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13010
NZ_PJUS02000331.1	Protein Homology	CDS	124582	124707	.	+	0	ID=cds-WP_241956962.1;Parent=gene-CYJ00_RS13010;Dbxref=GenBank:WP_241956962.1;Name=WP_241956962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017956.8;locus_tag=CYJ00_RS13010;product=SAV1978 family virulence-associated passenger protein;protein_id=WP_241956962.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	124713	124898	.	+	.	ID=gene-CYJ00_RS09600;Name=CYJ00_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09600;old_locus_tag=CYJ00_009610
NZ_PJUS02000331.1	Protein Homology	CDS	124713	124898	.	+	0	ID=cds-WP_015729205.1;Parent=gene-CYJ00_RS09600;Dbxref=GenBank:WP_015729205.1;Name=WP_015729205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729205.1;locus_tag=CYJ00_RS09600;product=hypothetical protein;protein_id=WP_015729205.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	124895	125245	.	+	.	ID=gene-CYJ00_RS09605;Name=CYJ00_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09605;old_locus_tag=CYJ00_009615
NZ_PJUS02000331.1	Protein Homology	CDS	124895	125245	.	+	0	ID=cds-WP_015978006.1;Parent=gene-CYJ00_RS09605;Dbxref=GenBank:WP_015978006.1;Name=WP_015978006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978006.1;locus_tag=CYJ00_RS09605;product=YopX family protein;protein_id=WP_015978006.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	125245	125460	.	+	.	ID=gene-CYJ00_RS09610;Name=CYJ00_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09610;old_locus_tag=CYJ00_009620
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	125245	125460	.	+	0	ID=cds-WP_041614783.1;Parent=gene-CYJ00_RS09610;Dbxref=GenBank:WP_041614783.1;Name=WP_041614783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09610;product=hypothetical protein;protein_id=WP_041614783.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	125457	125825	.	+	.	ID=gene-CYJ00_RS13685;Name=CYJ00_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13685
NZ_PJUS02000331.1	Protein Homology	CDS	125457	125825	.	+	0	ID=cds-WP_241956963.1;Parent=gene-CYJ00_RS13685;Dbxref=GenBank:WP_241956963.1;Name=WP_241956963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728817.1;locus_tag=CYJ00_RS13685;product=hypothetical protein;protein_id=WP_241956963.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	125837	126079	.	+	.	ID=gene-CYJ00_RS09620;Name=CYJ00_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09620;old_locus_tag=CYJ00_009630
NZ_PJUS02000331.1	Protein Homology	CDS	125837	126079	.	+	0	ID=cds-WP_020219638.1;Parent=gene-CYJ00_RS09620;Dbxref=GenBank:WP_020219638.1;Name=WP_020219638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219638.1;locus_tag=CYJ00_RS09620;product=hypothetical protein;protein_id=WP_020219638.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	126264	126842	.	+	.	ID=gene-CYJ00_RS09625;Name=CYJ00_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09625;old_locus_tag=CYJ00_009635
NZ_PJUS02000331.1	Protein Homology	CDS	126264	126842	.	+	0	ID=cds-WP_101458032.1;Parent=gene-CYJ00_RS09625;Dbxref=GenBank:WP_101458032.1;Name=WP_101458032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ00_RS09625;product=DUF4355 domain-containing protein;protein_id=WP_101458032.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	127995	128240	.	-	.	ID=gene-CYJ00_RS13985;Name=CYJ00_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13985;old_locus_tag=CYJ00_009645
NZ_PJUS02000331.1	Protein Homology	CDS	127995	128240	.	-	0	ID=cds-WP_103331991.1;Parent=gene-CYJ00_RS13985;Dbxref=GenBank:WP_103331991.1;Name=WP_103331991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.7;locus_tag=CYJ00_RS13985;product=IS3 family transposase;protein_id=WP_103331991.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	128288	128509	.	-	.	ID=gene-CYJ00_RS13990;Name=CYJ00_RS13990;end_range=128509,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13990;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	128288	128509	.	-	0	ID=cds-CYJ00_RS13990;Parent=gene-CYJ00_RS13990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=128509,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CYJ00_RS13990;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	128905	129273	.	+	.	ID=gene-CYJ00_RS09645;Name=CYJ00_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09645;old_locus_tag=CYJ00_009655
NZ_PJUS02000331.1	Protein Homology	CDS	128905	129273	.	+	0	ID=cds-WP_103331992.1;Parent=gene-CYJ00_RS09645;Dbxref=GenBank:WP_103331992.1;Name=WP_103331992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503462.1;locus_tag=CYJ00_RS09645;product=hypothetical protein;protein_id=WP_103331992.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	129619	129702	.	+	.	ID=gene-CYJ00_RS09650;Name=CYJ00_RS09650;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS09650;old_locus_tag=CYJ00_009660
NZ_PJUS02000331.1	tRNAscan-SE	tRNA	129619	129702	.	+	.	ID=rna-CYJ00_RS09650;Parent=gene-CYJ00_RS09650;anticodon=(pos:129653..129655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09650;product=tRNA-Leu
NZ_PJUS02000331.1	tRNAscan-SE	exon	129619	129702	.	+	.	ID=exon-CYJ00_RS09650-1;Parent=rna-CYJ00_RS09650;anticodon=(pos:129653..129655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS09650;product=tRNA-Leu
NZ_PJUS02000331.1	RefSeq	gene	130262	130528	.	+	.	ID=gene-CYJ00_RS09655;Name=CYJ00_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09655;old_locus_tag=CYJ00_009665
NZ_PJUS02000331.1	Protein Homology	CDS	130262	130528	.	+	0	ID=cds-WP_014612815.1;Parent=gene-CYJ00_RS09655;Dbxref=GenBank:WP_014612815.1;Name=WP_014612815.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074043.1;locus_tag=CYJ00_RS09655;product=Txe/YoeB family addiction module toxin;protein_id=WP_014612815.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	130889	130990	.	-	.	ID=gene-CYJ00_RS09660;Name=CYJ00_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09660;old_locus_tag=CYJ00_009670
NZ_PJUS02000331.1	Protein Homology	CDS	130889	130990	.	-	0	ID=cds-WP_019169745.1;Parent=gene-CYJ00_RS09660;Dbxref=GenBank:WP_019169745.1;Name=WP_019169745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165094.1;locus_tag=CYJ00_RS09660;product=SE2200 family small protein;protein_id=WP_019169745.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	131004	131282	.	-	.	ID=gene-CYJ00_RS09665;Name=CYJ00_RS09665;end_range=131282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09665;old_locus_tag=CYJ00_009675;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	131004	131282	.	-	0	ID=cds-CYJ00_RS09665;Parent=gene-CYJ00_RS09665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006099,GO:0008924;end_range=131282,.;gbkey=CDS;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501380.1;locus_tag=CYJ00_RS09665;partial=true;product=malate:quinone oxidoreductase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	131243	132127	.	-	.	ID=gene-CYJ00_RS09670;Name=CYJ00_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09670;old_locus_tag=CYJ00_009680
NZ_PJUS02000331.1	Protein Homology	CDS	131243	132127	.	-	0	ID=cds-WP_241956964.1;Parent=gene-CYJ00_RS09670;Dbxref=GenBank:WP_241956964.1;Name=WP_241956964.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=CYJ00_RS09670;product=YSIRK-type signal peptide-containing protein;protein_id=WP_241956964.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	132673	133392	.	-	.	ID=gene-CYJ00_RS09675;Name=CYJ00_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09675;old_locus_tag=CYJ00_009685
NZ_PJUS02000331.1	Protein Homology	CDS	132673	133392	.	-	0	ID=cds-WP_101458031.1;Parent=gene-CYJ00_RS09675;Dbxref=GenBank:WP_101458031.1;Name=WP_101458031.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614672.1;locus_tag=CYJ00_RS09675;product=trypsin-like serine peptidase;protein_id=WP_101458031.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	133869	134162	.	+	.	ID=gene-CYJ00_RS09685;Name=CYJ00_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09685;old_locus_tag=CYJ00_009695
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	133869	134162	.	+	0	ID=cds-WP_133158345.1;Parent=gene-CYJ00_RS09685;Dbxref=GenBank:WP_133158345.1;Name=WP_133158345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09685;product=hypothetical protein;protein_id=WP_133158345.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	134448	135560	.	+	.	ID=gene-CYJ00_RS09690;Name=CYJ00_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09690;old_locus_tag=CYJ00_009700
NZ_PJUS02000331.1	Protein Homology	CDS	134448	135560	.	+	0	ID=cds-WP_274539986.1;Parent=gene-CYJ00_RS09690;Dbxref=GenBank:WP_274539986.1;Name=WP_274539986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.7;locus_tag=CYJ00_RS09690;product=AAA family ATPase;protein_id=WP_274539986.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	136141	136335	.	-	.	ID=gene-CYJ00_RS09700;Name=CYJ00_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09700;old_locus_tag=CYJ00_009710
NZ_PJUS02000331.1	Protein Homology	CDS	136141	136335	.	-	0	ID=cds-WP_096549027.1;Parent=gene-CYJ00_RS09700;Dbxref=GenBank:WP_096549027.1;Name=WP_096549027.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CYJ00_RS09700;product=transposase;protein_id=WP_096549027.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	136542	137450	.	-	.	ID=gene-CYJ00_RS09705;Name=CYJ00_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09705;old_locus_tag=CYJ00_009715
NZ_PJUS02000331.1	Protein Homology	CDS	136542	137450	.	-	0	ID=cds-WP_103331995.1;Parent=gene-CYJ00_RS09705;Dbxref=GenBank:WP_103331995.1;Name=WP_103331995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729323.1;locus_tag=CYJ00_RS09705;product=biosynthetic peptidoglycan transglycosylase;protein_id=WP_103331995.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	137749	138600	.	-	.	ID=gene-CYJ00_RS09710;Name=CYJ00_RS09710;end_range=138600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09710;old_locus_tag=CYJ00_009720;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	137749	138600	.	-	0	ID=cds-CYJ00_RS09710;Parent=gene-CYJ00_RS09710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=138600,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ00_RS09710;partial=true;product=site-specific integrase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	138639	140510	.	-	.	ID=gene-CYJ00_RS09715;Name=CYJ00_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09715;old_locus_tag=CYJ00_009725
NZ_PJUS02000331.1	Protein Homology	CDS	138639	140510	.	-	0	ID=cds-WP_103331996.1;Parent=gene-CYJ00_RS09715;Dbxref=GenBank:WP_103331996.1;Name=WP_103331996.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219756.1;locus_tag=CYJ00_RS09715;product=MFS transporter;protein_id=WP_103331996.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	141183	141407	.	+	.	ID=gene-CYJ00_RS13995;Name=CYJ00_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13995;old_locus_tag=CYJ00_009730
NZ_PJUS02000331.1	Protein Homology	CDS	141183	141407	.	+	0	ID=cds-WP_142302666.1;Parent=gene-CYJ00_RS13995;Dbxref=GenBank:WP_142302666.1;Name=WP_142302666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013483.7;locus_tag=CYJ00_RS13995;product=IS3 family transposase;protein_id=WP_142302666.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	141614	142066	.	+	.	ID=gene-CYJ00_RS09725;Name=CYJ00_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09725;old_locus_tag=CYJ00_009735
NZ_PJUS02000331.1	Protein Homology	CDS	141614	142066	.	+	0	ID=cds-WP_241956966.1;Parent=gene-CYJ00_RS09725;Dbxref=GenBank:WP_241956966.1;Name=WP_241956966.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499814.1;locus_tag=CYJ00_RS09725;product=glutathione peroxidase;protein_id=WP_241956966.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	142757	143542	.	-	.	ID=gene-CYJ00_RS09730;Name=CYJ00_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09730;old_locus_tag=CYJ00_009740
NZ_PJUS02000331.1	Protein Homology	CDS	142757	143542	.	-	0	ID=cds-WP_101431536.1;Parent=gene-CYJ00_RS09730;Dbxref=GenBank:WP_101431536.1;Name=WP_101431536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167129.1;locus_tag=CYJ00_RS09730;product=hypothetical protein;protein_id=WP_101431536.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	143640	144581	.	-	.	ID=gene-CYJ00_RS09735;Name=CYJ00_RS09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09735;old_locus_tag=CYJ00_009745;partial=true;pseudo=true;start_range=.,143640
NZ_PJUS02000331.1	Protein Homology	CDS	143640	144581	.	-	0	ID=cds-CYJ00_RS09735;Parent=gene-CYJ00_RS09735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613623.1;locus_tag=CYJ00_RS09735;partial=true;product=M42 family metallopeptidase;pseudo=true;start_range=.,143640;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	144684	145331	.	+	.	ID=gene-CYJ00_RS09740;Name=CYJ00_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09740;old_locus_tag=CYJ00_009750
NZ_PJUS02000331.1	Protein Homology	CDS	144684	145331	.	+	0	ID=cds-WP_014613403.1;Parent=gene-CYJ00_RS09740;Dbxref=GenBank:WP_014613403.1;Name=WP_014613403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613403.1;locus_tag=CYJ00_RS09740;product=redox-sensing transcriptional repressor Rex;protein_id=WP_014613403.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	145645	145941	.	-	.	ID=gene-CYJ00_RS14000;Name=CYJ00_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14000;old_locus_tag=CYJ00_009755
NZ_PJUS02000331.1	Protein Homology	CDS	145645	145941	.	-	0	ID=cds-WP_115807476.1;Parent=gene-CYJ00_RS14000;Dbxref=GenBank:WP_115807476.1;Name=WP_115807476.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF012936.7;locus_tag=CYJ00_RS14000;product=asparagine synthase-related protein;protein_id=WP_115807476.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	146661	147542	.	-	.	ID=gene-CYJ00_RS09750;Name=CYJ00_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09750;old_locus_tag=CYJ00_009760
NZ_PJUS02000331.1	Protein Homology	CDS	146661	147542	.	-	0	ID=cds-WP_014613175.1;Parent=gene-CYJ00_RS09750;Dbxref=GenBank:WP_014613175.1;Name=WP_014613175.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498885.1;locus_tag=CYJ00_RS09750;product=N-acetylneuraminate lyase;protein_id=WP_014613175.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	147552	148088	.	+	.	ID=gene-CYJ00_RS09755;Name=CYJ00_RS09755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09755;old_locus_tag=CYJ00_009765;partial=true;pseudo=true;start_range=.,147552
NZ_PJUS02000331.1	Protein Homology	CDS	147552	148088	.	+	0	ID=cds-CYJ00_RS09755;Parent=gene-CYJ00_RS09755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044038,GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ00_RS09755;partial=true;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;pseudo=true;start_range=.,147552;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	148860	149300	.	+	.	ID=gene-CYJ00_RS14005;Name=CYJ00_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14005
NZ_PJUS02000331.1	Protein Homology	CDS	148860	149300	.	+	0	ID=cds-WP_423830915.1;Parent=gene-CYJ00_RS14005;Dbxref=GenBank:WP_423830915.1;Name=WP_423830915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614466.1;locus_tag=CYJ00_RS14005;product=DUF6978 family protein;protein_id=WP_423830915.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	149332	149445	.	+	.	ID=gene-CYJ00_RS14010;Name=CYJ00_RS14010;end_range=149445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14010;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	149332	149445	.	+	0	ID=cds-CYJ00_RS14010;Parent=gene-CYJ00_RS14010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=149445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561168.1;locus_tag=CYJ00_RS14010;partial=true;product=DUF1828 domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	149435	149707	.	-	.	ID=gene-CYJ00_RS09765;Name=CYJ00_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09765;old_locus_tag=CYJ00_009775
NZ_PJUS02000331.1	Protein Homology	CDS	149435	149707	.	-	0	ID=cds-WP_103331998.1;Parent=gene-CYJ00_RS09765;Dbxref=GenBank:WP_103331998.1;Name=WP_103331998.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=CYJ00_RS09765;product=UvrD-helicase domain-containing protein;protein_id=WP_103331998.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	149704	150360	.	-	.	ID=gene-CYJ00_RS09770;Name=CYJ00_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09770;old_locus_tag=CYJ00_009780
NZ_PJUS02000331.1	Protein Homology	CDS	149704	150360	.	-	0	ID=cds-WP_241956967.1;Parent=gene-CYJ00_RS09770;Dbxref=GenBank:WP_241956967.1;Name=WP_241956967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042779.5;locus_tag=CYJ00_RS09770;product=TOPRIM nucleotidyl transferase/hydrolase domain-containing protein;protein_id=WP_241956967.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	150448	151191	.	+	.	ID=gene-CYJ00_RS09775;Name=CYJ00_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09775;old_locus_tag=CYJ00_009785
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	150448	151191	.	+	0	ID=cds-WP_241956968.1;Parent=gene-CYJ00_RS09775;Dbxref=GenBank:WP_241956968.1;Name=WP_241956968.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09775;product=MFS transporter;protein_id=WP_241956968.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	151467	152240	.	-	.	ID=gene-CYJ00_RS13310;Name=CYJ00_RS13310;end_range=152240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13310;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	151467	152240	.	-	0	ID=cds-CYJ00_RS13310;Parent=gene-CYJ00_RS13310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015293;end_range=152240,.;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169620.1;locus_tag=CYJ00_RS13310;partial=true;product=bile acid:sodium symporter family protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	152241	153050	.	-	.	ID=gene-CYJ00_RS13315;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=pseudogene;locus_tag=CYJ00_RS13315;partial=true;pseudo=true;start_range=.,152241
NZ_PJUS02000331.1	Protein Homology	CDS	152241	153050	.	-	0	ID=cds-CYJ00_RS13315;Parent=gene-CYJ00_RS13315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CYJ00_RS13315;partial=true;product=bacillithiol disulfide reductase YpdA;pseudo=true;start_range=.,152241;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	153153	154052	.	-	.	ID=gene-CYJ00_RS09785;Name=CYJ00_RS09785;end_range=154052,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09785;old_locus_tag=CYJ00_009795;partial=true;pseudo=true;start_range=.,153153
NZ_PJUS02000331.1	Protein Homology	CDS	153153	154052	.	-	0	ID=cds-CYJ00_RS09785;Parent=gene-CYJ00_RS09785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;end_range=154052,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729415.1;locus_tag=CYJ00_RS09785;partial=true;product=sensor histidine kinase;pseudo=true;start_range=.,153153;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	154022	154966	.	-	.	ID=gene-CYJ00_RS09790;Name=CYJ00_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09790;old_locus_tag=CYJ00_009800
NZ_PJUS02000331.1	Protein Homology	CDS	154022	154966	.	-	0	ID=cds-WP_241956970.1;Parent=gene-CYJ00_RS09790;Dbxref=GenBank:WP_241956970.1;Name=WP_241956970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040899.1;locus_tag=CYJ00_RS09790;product=radical SAM/SPASM ryptide class RiPP maturase;protein_id=WP_241956970.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	155099	155257	.	-	.	ID=gene-CYJ00_RS13150;Name=CYJ00_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13150
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	155099	155257	.	-	0	ID=cds-WP_020219740.1;Parent=gene-CYJ00_RS13150;Dbxref=GenBank:WP_020219740.1;Name=WP_020219740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13150;product=hypothetical protein;protein_id=WP_020219740.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	155325	155801	.	-	.	ID=gene-CYJ00_RS09795;Name=CYJ00_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09795;old_locus_tag=CYJ00_009805
NZ_PJUS02000331.1	Protein Homology	CDS	155325	155801	.	-	0	ID=cds-WP_020219739.1;Parent=gene-CYJ00_RS09795;Dbxref=GenBank:WP_020219739.1;Name=WP_020219739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=CYJ00_RS09795;product=DUF4930 family protein;protein_id=WP_020219739.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	155843	156143	.	-	.	ID=gene-CYJ00_RS09800;Name=CYJ00_RS09800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09800;old_locus_tag=CYJ00_009810;partial=true;pseudo=true;start_range=.,155843
NZ_PJUS02000331.1	Protein Homology	CDS	155843	156143	.	-	0	ID=cds-CYJ00_RS09800;Parent=gene-CYJ00_RS09800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ00_RS09800;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,155843;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	156403	156741	.	-	.	ID=gene-CYJ00_RS09805;Name=CYJ00_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09805;old_locus_tag=CYJ00_009815
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	156403	156741	.	-	0	ID=cds-WP_101458050.1;Parent=gene-CYJ00_RS09805;Dbxref=GenBank:WP_101458050.1;Name=WP_101458050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09805;product=hypothetical protein;protein_id=WP_101458050.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	156808	157449	.	-	.	ID=gene-CYJ00_RS09810;Name=CYJ00_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09810;old_locus_tag=CYJ00_009820
NZ_PJUS02000331.1	Protein Homology	CDS	156808	157449	.	-	0	ID=cds-WP_037543107.1;Parent=gene-CYJ00_RS09810;Dbxref=GenBank:WP_037543107.1;Name=WP_037543107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614009.1;locus_tag=CYJ00_RS09810;product=thermonuclease family protein;protein_id=WP_037543107.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	157639	158340	.	-	.	ID=gene-CYJ00_RS09815;Name=CYJ00_RS09815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09815;old_locus_tag=CYJ00_009825;partial=true;pseudo=true;start_range=.,157639
NZ_PJUS02000331.1	Protein Homology	CDS	157639	158340	.	-	0	ID=cds-CYJ00_RS09815;Parent=gene-CYJ00_RS09815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494710.1;locus_tag=CYJ00_RS09815;partial=true;product=GGDEF domain-containing protein;pseudo=true;start_range=.,157639;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	158530	159423	.	+	.	ID=gene-CYJ00_RS09820;Name=CYJ00_RS09820;end_range=159423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09820;old_locus_tag=CYJ00_009830;partial=true;pseudo=true;start_range=.,158530
NZ_PJUS02000331.1	Protein Homology	CDS	158530	159423	.	+	0	ID=cds-CYJ00_RS09820;Parent=gene-CYJ00_RS09820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006855,GO:0022857,GO:0016020;end_range=159423,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ00_RS09820;partial=true;product=DHA2 family efflux MFS transporter permease subunit;pseudo=true;start_range=.,158530;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	159422	159580	.	+	.	ID=gene-CYJ00_RS09825;Name=CYJ00_RS09825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09825;old_locus_tag=CYJ00_009835;partial=true;pseudo=true;start_range=.,159422
NZ_PJUS02000331.1	Protein Homology	CDS	159422	159580	.	+	0	ID=cds-CYJ00_RS09825;Parent=gene-CYJ00_RS09825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613750.1;locus_tag=CYJ00_RS09825;partial=true;product=uridine kinase;pseudo=true;start_range=.,159422;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	159607	160083	.	+	.	ID=gene-CYJ00_RS09830;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CYJ00_RS09830;old_locus_tag=CYJ00_009840
NZ_PJUS02000331.1	Protein Homology	CDS	159607	160083	.	+	0	ID=cds-WP_014613751.1;Parent=gene-CYJ00_RS09830;Dbxref=GenBank:WP_014613751.1;Name=WP_014613751.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169715.1;locus_tag=CYJ00_RS09830;product=transcription elongation factor GreA;protein_id=WP_014613751.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	160724	161152	.	-	.	ID=gene-CYJ00_RS09835;Name=CYJ00_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09835;old_locus_tag=CYJ00_009845
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	160724	161152	.	-	0	ID=cds-WP_241956971.1;Parent=gene-CYJ00_RS09835;Dbxref=GenBank:WP_241956971.1;Name=WP_241956971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09835;product=SGNH/GDSL hydrolase family protein;protein_id=WP_241956971.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	161395	161715	.	+	.	ID=gene-CYJ00_RS09840;Name=CYJ00_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09840;old_locus_tag=CYJ00_009850
NZ_PJUS02000331.1	Protein Homology	CDS	161395	161715	.	+	0	ID=cds-WP_019168869.1;Parent=gene-CYJ00_RS09840;Dbxref=GenBank:WP_019168869.1;Name=WP_019168869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805733.1;locus_tag=CYJ00_RS09840;product=DUF961 family protein;protein_id=WP_019168869.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	161730	162083	.	+	.	ID=gene-CYJ00_RS09845;Name=CYJ00_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09845;old_locus_tag=CYJ00_009855
NZ_PJUS02000331.1	Protein Homology	CDS	161730	162083	.	+	0	ID=cds-WP_103332017.1;Parent=gene-CYJ00_RS09845;Dbxref=GenBank:WP_103332017.1;Name=WP_103332017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386891.1;locus_tag=CYJ00_RS09845;product=hypothetical protein;protein_id=WP_103332017.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	sequence_feature	162480	162927	.	+	.	ID=id-NZ_PJUS02000331.1:162480..162927;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUS02000331.1	RefSeq	pseudogene	163305	163625	.	-	.	ID=gene-CYJ00_RS14015;Name=CYJ00_RS14015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14015;partial=true;pseudo=true;start_range=.,163305
NZ_PJUS02000331.1	Protein Homology	CDS	163305	163625	.	-	0	ID=cds-CYJ00_RS14015;Parent=gene-CYJ00_RS14015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037690.7;locus_tag=CYJ00_RS14015;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,163305;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	163910	164548	.	-	.	ID=gene-CYJ00_RS09855;Name=CYJ00_RS09855;end_range=164548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09855;old_locus_tag=CYJ00_009865;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	163910	164548	.	-	0	ID=cds-CYJ00_RS09855;Parent=gene-CYJ00_RS09855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=164548,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS09855;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	164547	165239	.	-	.	ID=gene-CYJ00_RS09860;Name=CYJ00_RS09860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09860;old_locus_tag=CYJ00_009870;partial=true;pseudo=true;start_range=.,164547
NZ_PJUS02000331.1	Protein Homology	CDS	164547	165239	.	-	0	ID=cds-CYJ00_RS09860;Parent=gene-CYJ00_RS09860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613404.1;locus_tag=CYJ00_RS09860;partial=true;product=MFS transporter;pseudo=true;start_range=.,164547;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	165220	165378	.	-	.	ID=gene-CYJ00_RS14020;Name=CYJ00_RS14020;end_range=165378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14020;old_locus_tag=CYJ00_009875;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	165220	165378	.	-	0	ID=cds-CYJ00_RS14020;Parent=gene-CYJ00_RS14020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=165378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613405.1;locus_tag=CYJ00_RS14020;partial=true;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	165359	166246	.	+	.	ID=gene-CYJ00_RS09870;Name=CYJ00_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09870;old_locus_tag=CYJ00_009880
NZ_PJUS02000331.1	Protein Homology	CDS	165359	166246	.	+	0	ID=cds-WP_103332000.1;Parent=gene-CYJ00_RS09870;Dbxref=GenBank:WP_103332000.1;Name=WP_103332000.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS09870;product=MFS transporter;protein_id=WP_103332000.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	166254	166949	.	+	.	ID=gene-CYJ00_RS09875;Name=CYJ00_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09875;old_locus_tag=CYJ00_009885
NZ_PJUS02000331.1	Protein Homology	CDS	166254	166949	.	+	0	ID=cds-WP_241956993.1;Parent=gene-CYJ00_RS09875;Dbxref=GenBank:WP_241956993.1;Name=WP_241956993.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:TIGR01494.1;locus_tag=CYJ00_RS09875;product=HAD-IC family P-type ATPase;protein_id=WP_241956993.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	166970	167788	.	-	.	ID=gene-CYJ00_RS09880;Name=CYJ00_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09880;old_locus_tag=CYJ00_009890
NZ_PJUS02000331.1	Protein Homology	CDS	166970	167788	.	-	0	ID=cds-WP_241956972.1;Parent=gene-CYJ00_RS09880;Dbxref=GenBank:WP_241956972.1;Name=WP_241956972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729287.1;locus_tag=CYJ00_RS09880;product=hypothetical protein;protein_id=WP_241956972.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	167868	168572	.	-	.	ID=gene-CYJ00_RS09885;Name=CYJ00_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09885;old_locus_tag=CYJ00_009895
NZ_PJUS02000331.1	Protein Homology	CDS	167868	168572	.	-	0	ID=cds-WP_225549916.1;Parent=gene-CYJ00_RS09885;Dbxref=GenBank:WP_225549916.1;Name=WP_225549916.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166173.1;locus_tag=CYJ00_RS09885;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_225549916.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	168652	168977	.	+	.	ID=gene-CYJ00_RS14025;Name=CYJ00_RS14025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14025;partial=true;pseudo=true;start_range=.,168652
NZ_PJUS02000331.1	Protein Homology	CDS	168652	168977	.	+	0	ID=cds-CYJ00_RS14025;Parent=gene-CYJ00_RS14025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_373895778.1;locus_tag=CYJ00_RS14025;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,168652;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	169043	169228	.	+	.	ID=gene-CYJ00_RS13325;Name=CYJ00_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13325
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	169043	169228	.	+	0	ID=cds-WP_014614016.1;Parent=gene-CYJ00_RS13325;Dbxref=GenBank:WP_014614016.1;Name=WP_014614016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13325;product=hypothetical protein;protein_id=WP_014614016.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	169454	169687	.	-	.	ID=gene-CYJ00_RS09895;Name=CYJ00_RS09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09895;old_locus_tag=CYJ00_009905;partial=true;pseudo=true;start_range=.,169454
NZ_PJUS02000331.1	Protein Homology	CDS	169454	169687	.	-	0	ID=cds-CYJ00_RS09895;Parent=gene-CYJ00_RS09895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782446.1;locus_tag=CYJ00_RS09895;partial=true;product=leucotoxin LukD;pseudo=true;start_range=.,169454;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	169689	170261	.	-	.	ID=gene-CYJ00_RS09900;Name=CYJ00_RS09900;end_range=170261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09900;old_locus_tag=CYJ00_009910;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	169689	170261	.	-	0	ID=cds-CYJ00_RS09900;Parent=gene-CYJ00_RS09900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051715,GO:0005576;end_range=170261,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=cytolysis in another organism|0051715||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916699.1;locus_tag=CYJ00_RS09900;partial=true;product=leukocidin family pore-forming toxin;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	170351	171073	.	-	.	ID=gene-CYJ00_RS09905;Name=CYJ00_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09905;old_locus_tag=CYJ00_009915
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	170351	171073	.	-	0	ID=cds-WP_133158347.1;Parent=gene-CYJ00_RS09905;Dbxref=GenBank:WP_133158347.1;Name=WP_133158347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09905;product=hypothetical protein;protein_id=WP_133158347.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	171064	171516	.	+	.	ID=gene-CYJ00_RS13690;Name=CYJ00_RS13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13690;partial=true;pseudo=true;start_range=.,171064
NZ_PJUS02000331.1	Protein Homology	CDS	171064	171516	.	+	0	ID=cds-CYJ00_RS13690;Parent=gene-CYJ00_RS13690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708297.1;locus_tag=CYJ00_RS13690;partial=true;product=SAR2788 family putative toxin;pseudo=true;start_range=.,171064;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	171531	172247	.	+	.	ID=gene-CYJ00_RS13695;Name=CYJ00_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13695;old_locus_tag=CYJ00_009925
NZ_PJUS02000331.1	Protein Homology	CDS	171531	172247	.	+	0	ID=cds-WP_103332002.1;Parent=gene-CYJ00_RS13695;Dbxref=GenBank:WP_103332002.1;Name=WP_103332002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425370.1;locus_tag=CYJ00_RS13695;product=MBL fold metallo-hydrolase;protein_id=WP_103332002.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	172314	172631	.	-	.	ID=gene-CYJ00_RS09920;Name=CYJ00_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09920;old_locus_tag=CYJ00_009930
NZ_PJUS02000331.1	Protein Homology	CDS	172314	172631	.	-	0	ID=cds-WP_014613622.1;Parent=gene-CYJ00_RS09920;Dbxref=GenBank:WP_014613622.1;Name=WP_014613622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=CYJ00_RS09920;product=hypothetical protein;protein_id=WP_014613622.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	172663	172791	.	-	.	ID=gene-CYJ00_RS13820;Name=CYJ00_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13820
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	172663	172791	.	-	0	ID=cds-WP_274539982.1;Parent=gene-CYJ00_RS13820;Dbxref=GenBank:WP_274539982.1;Name=WP_274539982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13820;product=hypothetical protein;protein_id=WP_274539982.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	172890	173468	.	-	.	ID=gene-CYJ00_RS09930;Name=CYJ00_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09930;old_locus_tag=CYJ00_009940
NZ_PJUS02000331.1	Protein Homology	CDS	172890	173468	.	-	0	ID=cds-WP_103332003.1;Parent=gene-CYJ00_RS09930;Dbxref=GenBank:WP_103332003.1;Name=WP_103332003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424451.1;locus_tag=CYJ00_RS09930;product=DUF1361 domain-containing protein;protein_id=WP_103332003.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	173471	173626	.	-	.	ID=gene-CYJ00_RS09935;Name=CYJ00_RS09935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09935;old_locus_tag=CYJ00_009945;partial=true;pseudo=true;start_range=.,173471
NZ_PJUS02000331.1	Protein Homology	CDS	173471	173626	.	-	0	ID=cds-CYJ00_RS09935;Parent=gene-CYJ00_RS09935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612844.1;locus_tag=CYJ00_RS09935;partial=true;product=DoxX family protein;pseudo=true;start_range=.,173471;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	173666	174118	.	-	.	ID=gene-CYJ00_RS09940;Name=CYJ00_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09940;old_locus_tag=CYJ00_009950
NZ_PJUS02000331.1	Protein Homology	CDS	173666	174118	.	-	0	ID=cds-WP_014612843.1;Parent=gene-CYJ00_RS09940;Dbxref=GenBank:WP_014612843.1;Name=WP_014612843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093553.1;locus_tag=CYJ00_RS09940;product=DM13 domain-containing protein;protein_id=WP_014612843.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	174301	174519	.	+	.	ID=gene-CYJ00_RS09945;Name=CYJ00_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09945;old_locus_tag=CYJ00_009955
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	174301	174519	.	+	0	ID=cds-WP_049773686.1;Parent=gene-CYJ00_RS09945;Dbxref=GenBank:WP_049773686.1;Name=WP_049773686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09945;product=hypothetical protein;protein_id=WP_049773686.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	174539	175030	.	+	.	ID=gene-CYJ00_RS09950;Name=CYJ00_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09950;old_locus_tag=CYJ00_009960
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	174539	175030	.	+	0	ID=cds-WP_241956974.1;Parent=gene-CYJ00_RS09950;Dbxref=GenBank:WP_241956974.1;Name=WP_241956974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09950;product=hypothetical protein;protein_id=WP_241956974.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	175406	175711	.	+	.	ID=gene-CYJ00_RS09955;Name=CYJ00_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09955;old_locus_tag=CYJ00_009965
NZ_PJUS02000331.1	Protein Homology	CDS	175406	175711	.	+	0	ID=cds-WP_096536260.1;Parent=gene-CYJ00_RS09955;Dbxref=GenBank:WP_096536260.1;Name=WP_096536260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167489.1;locus_tag=CYJ00_RS09955;product=hypothetical protein;protein_id=WP_096536260.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	175742	176566	.	-	.	ID=gene-CYJ00_RS09960;Name=CYJ00_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09960;old_locus_tag=CYJ00_009970
NZ_PJUS02000331.1	Protein Homology	CDS	175742	176566	.	-	0	ID=cds-WP_103332004.1;Parent=gene-CYJ00_RS09960;Dbxref=GenBank:WP_103332004.1;Name=WP_103332004.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF014442.7;locus_tag=CYJ00_RS09960;product=HsdM family class I SAM-dependent methyltransferase;protein_id=WP_103332004.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	176607	176822	.	+	.	ID=gene-CYJ00_RS09965;Name=CYJ00_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09965;old_locus_tag=CYJ00_009975
NZ_PJUS02000331.1	Protein Homology	CDS	176607	176822	.	+	0	ID=cds-WP_241956975.1;Parent=gene-CYJ00_RS09965;Dbxref=GenBank:WP_241956975.1;Name=WP_241956975.1;Ontology_term=GO:0009372,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: protein motif:HMM:NF016526.7;locus_tag=CYJ00_RS09965;product=accessory gene regulator B family protein;protein_id=WP_241956975.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	176824	176961	.	+	.	ID=gene-CYJ00_RS09970;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=CYJ00_RS09970;old_locus_tag=CYJ00_009980
NZ_PJUS02000331.1	Protein Homology	CDS	176824	176961	.	+	0	ID=cds-WP_014613413.1;Parent=gene-CYJ00_RS09970;Dbxref=GenBank:WP_014613413.1;Name=WP_014613413.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=CYJ00_RS09970;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_014613413.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	176985	177293	.	+	.	ID=gene-CYJ00_RS14030;Name=CYJ00_RS14030;end_range=177293,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14030;old_locus_tag=CYJ00_009985;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	176985	177293	.	+	0	ID=cds-CYJ00_RS14030;Parent=gene-CYJ00_RS14030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=177293,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729415.1;locus_tag=CYJ00_RS14030;partial=true;product=quorum-sensing sensor histidine kinase AgrC;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	177495	177998	.	-	.	ID=gene-CYJ00_RS09980;Name=CYJ00_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09980;old_locus_tag=CYJ00_009990
NZ_PJUS02000331.1	Protein Homology	CDS	177495	177998	.	-	0	ID=cds-WP_050331091.1;Parent=gene-CYJ00_RS09980;Dbxref=GenBank:WP_050331091.1;Name=WP_050331091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168881.1;locus_tag=CYJ00_RS09980;product=helix-turn-helix domain-containing protein;protein_id=WP_050331091.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	178284	178799	.	+	.	ID=gene-CYJ00_RS09985;Name=CYJ00_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS09985;old_locus_tag=CYJ00_009995
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	178284	178799	.	+	0	ID=cds-WP_241956976.1;Parent=gene-CYJ00_RS09985;Dbxref=GenBank:WP_241956976.1;Name=WP_241956976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS09985;product=hypothetical protein;protein_id=WP_241956976.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	178768	179469	.	+	.	ID=gene-CYJ00_RS09990;Name=CYJ00_RS09990;end_range=179469,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS09990;old_locus_tag=CYJ00_010000;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	178768	179469	.	+	0	ID=cds-CYJ00_RS09990;Parent=gene-CYJ00_RS09990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;end_range=179469,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:TIGR01494.1;locus_tag=CYJ00_RS09990;partial=true;product=HAD-IC family P-type ATPase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	179511	180260	.	-	.	ID=gene-CYJ00_RS13705;Name=CYJ00_RS13705;end_range=180260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13705;partial=true;pseudo=true;start_range=.,179511
NZ_PJUS02000331.1	Protein Homology	CDS	179511	180260	.	-	0	ID=cds-CYJ00_RS13705;Parent=gene-CYJ00_RS13705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=180260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS13705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,179511;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	180254	181024	.	-	.	ID=gene-CYJ00_RS10005;Name=CYJ00_RS10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10005;old_locus_tag=CYJ00_010015;partial=true;pseudo=true;start_range=.,180254
NZ_PJUS02000331.1	Protein Homology	CDS	180254	181024	.	-	0	ID=cds-CYJ00_RS10005;Parent=gene-CYJ00_RS10005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=CYJ00_RS10005;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,180254;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	181364	182374	.	-	.	ID=gene-CYJ00_RS13710;Name=CYJ00_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13710
NZ_PJUS02000331.1	Protein Homology	CDS	181364	182374	.	-	0	ID=cds-WP_241956978.1;Parent=gene-CYJ00_RS13710;Dbxref=GenBank:WP_241956978.1;Name=WP_241956978.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425458.1;locus_tag=CYJ00_RS13710;product=cation diffusion facilitator family transporter;protein_id=WP_241956978.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	182446	182934	.	+	.	ID=gene-CYJ00_RS10020;Name=CYJ00_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10020;old_locus_tag=CYJ00_010030
NZ_PJUS02000331.1	Protein Homology	CDS	182446	182934	.	+	0	ID=cds-WP_241956979.1;Parent=gene-CYJ00_RS10020;Dbxref=GenBank:WP_241956979.1;Name=WP_241956979.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=CYJ00_RS10020;product=trypsin-like serine peptidase;protein_id=WP_241956979.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	183145	183807	.	-	.	ID=gene-CYJ00_RS10025;Name=der;gbkey=Gene;gene=der;gene_biotype=pseudogene;locus_tag=CYJ00_RS10025;old_locus_tag=CYJ00_010035;partial=true;pseudo=true;start_range=.,183145
NZ_PJUS02000331.1	Protein Homology	CDS	183145	183807	.	-	0	ID=cds-CYJ00_RS10025;Parent=gene-CYJ00_RS10025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CYJ00_RS10025;partial=true;product=ribosome biogenesis GTPase Der;pseudo=true;start_range=.,183145;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	183926	184483	.	+	.	ID=gene-CYJ00_RS10030;Name=CYJ00_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10030;old_locus_tag=CYJ00_010040
NZ_PJUS02000331.1	Protein Homology	CDS	183926	184483	.	+	0	ID=cds-WP_014613040.1;Parent=gene-CYJ00_RS10030;Dbxref=GenBank:WP_014613040.1;Name=WP_014613040.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219494.1;locus_tag=CYJ00_RS10030;product=GNAT family N-acetyltransferase;protein_id=WP_014613040.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	184502	184849	.	+	.	ID=gene-CYJ00_RS10035;Name=CYJ00_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10035;old_locus_tag=CYJ00_010045
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	184502	184849	.	+	0	ID=cds-WP_103332005.1;Parent=gene-CYJ00_RS10035;Dbxref=GenBank:WP_103332005.1;Name=WP_103332005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10035;product=hypothetical protein;protein_id=WP_103332005.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	184871	185284	.	+	.	ID=gene-CYJ00_RS10040;Name=CYJ00_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10040;old_locus_tag=CYJ00_010050
NZ_PJUS02000331.1	Protein Homology	CDS	184871	185284	.	+	0	ID=cds-WP_103332006.1;Parent=gene-CYJ00_RS10040;Dbxref=GenBank:WP_103332006.1;Name=WP_103332006.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS10040;product=MFS transporter;protein_id=WP_103332006.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	185252	185872	.	-	.	ID=gene-CYJ00_RS10045;Name=CYJ00_RS10045;end_range=185872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10045;old_locus_tag=CYJ00_010055;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	185252	185872	.	-	0	ID=cds-CYJ00_RS10045;Parent=gene-CYJ00_RS10045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051027,GO:0005198,GO:0046798;end_range=185872,.;gbkey=CDS;go_component=viral portal complex|0046798||IEA;go_function=structural molecule activity|0005198||IEA;go_process=DNA transport|0051027||IEA;inference=COORDINATES: protein motif:HMM:TIGR01538.1;locus_tag=CYJ00_RS10045;partial=true;product=phage portal protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	186681	186995	.	+	.	ID=gene-CYJ00_RS10050;Name=CYJ00_RS10050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10050;old_locus_tag=CYJ00_010060;partial=true;pseudo=true;start_range=.,186681
NZ_PJUS02000331.1	Protein Homology	CDS	186681	186995	.	+	0	ID=cds-CYJ00_RS10050;Parent=gene-CYJ00_RS10050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614674.1;locus_tag=CYJ00_RS10050;partial=true;product=trypsin-like peptidase domain-containing protein;pseudo=true;start_range=.,186681;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	187364	188089	.	-	.	ID=gene-CYJ00_RS10055;Name=CYJ00_RS10055;end_range=188089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10055;old_locus_tag=CYJ00_010065;partial=true;pseudo=true;start_range=.,187364
NZ_PJUS02000331.1	Protein Homology	CDS	187364	188089	.	-	0	ID=cds-CYJ00_RS10055;Parent=gene-CYJ00_RS10055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008658;end_range=188089,.;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=CYJ00_RS10055;partial=true;product=penicillin-binding transpeptidase domain-containing protein;pseudo=true;start_range=.,187364;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	188170	188691	.	-	.	ID=gene-CYJ00_RS10060;Name=CYJ00_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10060;old_locus_tag=CYJ00_010070
NZ_PJUS02000331.1	Protein Homology	CDS	188170	188691	.	-	0	ID=cds-WP_014613489.1;Parent=gene-CYJ00_RS10060;Dbxref=GenBank:WP_014613489.1;Name=WP_014613489.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166469.1;locus_tag=CYJ00_RS10060;product=acyl-CoA thioesterase;protein_id=WP_014613489.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	188710	189438	.	-	.	ID=gene-CYJ00_RS10065;Name=CYJ00_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10065;old_locus_tag=CYJ00_010075
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	188710	189438	.	-	0	ID=cds-WP_241956980.1;Parent=gene-CYJ00_RS10065;Dbxref=GenBank:WP_241956980.1;Name=WP_241956980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10065;product=aminopeptidase;protein_id=WP_241956980.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	189583	189945	.	+	.	ID=gene-CYJ00_RS10070;Name=CYJ00_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10070;old_locus_tag=CYJ00_010080
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	189583	189945	.	+	0	ID=cds-WP_101458065.1;Parent=gene-CYJ00_RS10070;Dbxref=GenBank:WP_101458065.1;Name=WP_101458065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10070;product=hypothetical protein;protein_id=WP_101458065.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	189946	190170	.	+	.	ID=gene-CYJ00_RS10075;Name=CYJ00_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10075;old_locus_tag=CYJ00_010085
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	189946	190170	.	+	0	ID=cds-WP_103332007.1;Parent=gene-CYJ00_RS10075;Dbxref=GenBank:WP_103332007.1;Name=WP_103332007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10075;product=hypothetical protein;protein_id=WP_103332007.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	190237	190797	.	-	.	ID=gene-CYJ00_RS13715;Name=CYJ00_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13715
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	190237	190797	.	-	0	ID=cds-WP_225550264.1;Parent=gene-CYJ00_RS13715;Dbxref=GenBank:WP_225550264.1;Name=WP_225550264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13715;product=hypothetical protein;protein_id=WP_225550264.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	190858	191538	.	+	.	ID=gene-CYJ00_RS10090;Name=CYJ00_RS10090;end_range=191538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10090;old_locus_tag=CYJ00_010100;partial=true;pseudo=true;start_range=.,190858
NZ_PJUS02000331.1	Protein Homology	CDS	190858	191538	.	+	0	ID=cds-CYJ00_RS10090;Parent=gene-CYJ00_RS10090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=191538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS10090;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,190858;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	192378	192878	.	+	.	ID=gene-CYJ00_RS10095;Name=CYJ00_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10095;old_locus_tag=CYJ00_010105
NZ_PJUS02000331.1	Protein Homology	CDS	192378	192878	.	+	0	ID=cds-WP_000421245.1;Parent=gene-CYJ00_RS10095;Dbxref=GenBank:WP_000421245.1;Name=WP_000421245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425404.1;locus_tag=CYJ00_RS10095;product=antirestriction protein ArdA;protein_id=WP_000421245.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	192880	193641	.	+	.	ID=gene-CYJ00_RS10100;Name=CYJ00_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10100;old_locus_tag=CYJ00_010110
NZ_PJUS02000331.1	Protein Homology	CDS	192880	193641	.	+	0	ID=cds-WP_241956982.1;Parent=gene-CYJ00_RS10100;Dbxref=GenBank:WP_241956982.1;Name=WP_241956982.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.7;locus_tag=CYJ00_RS10100;product=cytochrome P450;protein_id=WP_241956982.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	193770	194075	.	-	.	ID=gene-CYJ00_RS10105;Name=CYJ00_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10105;old_locus_tag=CYJ00_010115
NZ_PJUS02000331.1	Protein Homology	CDS	193770	194075	.	-	0	ID=cds-WP_015729090.1;Parent=gene-CYJ00_RS10105;Dbxref=GenBank:WP_015729090.1;Name=WP_015729090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613977.1;locus_tag=CYJ00_RS10105;product=HesB/YadR/YfhF family protein;protein_id=WP_015729090.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	194378	194578	.	+	.	ID=gene-CYJ00_RS10115;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=CYJ00_RS10115;old_locus_tag=CYJ00_010125
NZ_PJUS02000331.1	Protein Homology	CDS	194378	194578	.	+	0	ID=cds-WP_014613945.1;Parent=gene-CYJ00_RS10115;Dbxref=GenBank:WP_014613945.1;Name=WP_014613945.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CYJ00_RS10115;product=cold shock protein CspA;protein_id=WP_014613945.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	195195	195554	.	-	.	ID=gene-CYJ00_RS13720;Name=CYJ00_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13720
NZ_PJUS02000331.1	Protein Homology	CDS	195195	195554	.	-	0	ID=cds-WP_241956983.1;Parent=gene-CYJ00_RS13720;Dbxref=GenBank:WP_241956983.1;Name=WP_241956983.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.8;locus_tag=CYJ00_RS13720;product=IS110 family transposase;protein_id=WP_241956983.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	195615	196265	.	+	.	ID=gene-CYJ00_RS10125;Name=CYJ00_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10125;old_locus_tag=CYJ00_010135
NZ_PJUS02000331.1	Protein Homology	CDS	195615	196265	.	+	0	ID=cds-WP_490327965.1;Parent=gene-CYJ00_RS10125;Dbxref=GenBank:WP_490327965.1;Name=WP_490327965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025713.8;locus_tag=CYJ00_RS10125;product=abortive infection family protein;protein_id=WP_490327965.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	196396	196887	.	+	.	ID=gene-CYJ00_RS14035;Name=CYJ00_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS14035;old_locus_tag=CYJ00_010140
NZ_PJUS02000331.1	Protein Homology	CDS	196396	196887	.	+	0	ID=cds-WP_423830916.1;Parent=gene-CYJ00_RS14035;Dbxref=GenBank:WP_423830916.1;Name=WP_423830916.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=CYJ00_RS14035;product=DsbA family protein;protein_id=WP_423830916.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	198186	198701	.	-	.	ID=gene-CYJ00_RS10140;Name=CYJ00_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10140;old_locus_tag=CYJ00_010150
NZ_PJUS02000331.1	Protein Homology	CDS	198186	198701	.	-	0	ID=cds-WP_014612838.1;Parent=gene-CYJ00_RS10140;Dbxref=GenBank:WP_014612838.1;Name=WP_014612838.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167112.1;locus_tag=CYJ00_RS10140;product=peroxiredoxin family protein;protein_id=WP_014612838.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	198759	199379	.	-	.	ID=gene-CYJ00_RS10145;Name=bla;end_range=199379,.;gbkey=Gene;gene=bla;gene_biotype=pseudogene;locus_tag=CYJ00_RS10145;old_locus_tag=CYJ00_010155;partial=true;pseudo=true;start_range=.,198759
NZ_PJUS02000331.1	Protein Homology	CDS	198759	199379	.	-	0	ID=cds-CYJ00_RS10145;Parent=gene-CYJ00_RS10145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0030655,GO:0046677,GO:0008800;end_range=199379,.;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=CYJ00_RS10145;partial=true;product=class A beta-lactamase;pseudo=true;start_range=.,198759;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	199378	199995	.	+	.	ID=gene-CYJ00_RS10150;Name=CYJ00_RS10150;end_range=199995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10150;old_locus_tag=CYJ00_010160;partial=true;pseudo=true;start_range=.,199378
NZ_PJUS02000331.1	Protein Homology	CDS	199378	199995	.	+	0	ID=cds-CYJ00_RS10150;Parent=gene-CYJ00_RS10150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=199995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691999.1;locus_tag=CYJ00_RS10150;partial=true;product=conjugal transfer protein;pseudo=true;start_range=.,199378;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	200375	200617	.	+	.	ID=gene-CYJ00_RS13725;Name=CYJ00_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13725
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	200375	200617	.	+	0	ID=cds-WP_241956985.1;Parent=gene-CYJ00_RS13725;Dbxref=GenBank:WP_241956985.1;Name=WP_241956985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13725;product=hypothetical protein;protein_id=WP_241956985.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	201189	202454	.	+	.	ID=gene-CYJ00_RS13340;Name=CYJ00_RS13340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13340;partial=true;pseudo=true;start_range=.,201189
NZ_PJUS02000331.1	Protein Homology	CDS	201189	202454	.	+	0	ID=cds-CYJ00_RS13340;Parent=gene-CYJ00_RS13340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478484.1;locus_tag=CYJ00_RS13340;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,201189;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	202582	202695	.	+	.	ID=gene-CYJ00_RS13730;Name=CYJ00_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13730
NZ_PJUS02000331.1	Protein Homology	CDS	202582	202695	.	+	0	ID=cds-WP_075773696.1;Parent=gene-CYJ00_RS13730;Dbxref=GenBank:WP_075773696.1;Name=WP_075773696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04450.1;locus_tag=CYJ00_RS13730;product=putative immunity/bacteriocin fusion bifunctional protein;protein_id=WP_075773696.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	203603	204130	.	+	.	ID=gene-CYJ00_RS13825;Name=CYJ00_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13825;old_locus_tag=CYJ00_010180
NZ_PJUS02000331.1	Protein Homology	CDS	203603	204130	.	+	0	ID=cds-WP_274539983.1;Parent=gene-CYJ00_RS13825;Dbxref=GenBank:WP_274539983.1;Name=WP_274539983.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=CYJ00_RS13825;product=trypsin-like serine protease;protein_id=WP_274539983.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	204120	204518	.	-	.	ID=gene-CYJ00_RS10175;Name=CYJ00_RS10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10175;old_locus_tag=CYJ00_010185;partial=true;pseudo=true;start_range=.,204120
NZ_PJUS02000331.1	Protein Homology	CDS	204120	204518	.	-	0	ID=cds-CYJ00_RS10175;Parent=gene-CYJ00_RS10175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=CYJ00_RS10175;partial=true;product=YkvI family membrane protein;pseudo=true;start_range=.,204120;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	204805	204981	.	+	.	ID=gene-CYJ00_RS14040;Name=CYJ00_RS14040;end_range=204981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14040;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	204805	204981	.	+	0	ID=cds-CYJ00_RS14040;Parent=gene-CYJ00_RS14040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=204981,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=CYJ00_RS14040;partial=true;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	205281	205856	.	-	.	ID=gene-CYJ00_RS10180;Name=CYJ00_RS10180;end_range=205856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10180;old_locus_tag=CYJ00_010190;partial=true;pseudo=true;start_range=.,205281
NZ_PJUS02000331.1	Protein Homology	CDS	205281	205856	.	-	0	ID=cds-CYJ00_RS10180;Parent=gene-CYJ00_RS10180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=205856,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=CYJ00_RS10180;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,205281;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	206019	206420	.	-	.	ID=gene-CYJ00_RS10185;Name=CYJ00_RS10185;end_range=206420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10185;old_locus_tag=CYJ00_010195;partial=true;pseudo=true;start_range=.,206019
NZ_PJUS02000331.1	Protein Homology	CDS	206019	206420	.	-	0	ID=cds-CYJ00_RS10185;Parent=gene-CYJ00_RS10185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016032,GO:0019068,GO:0044423;end_range=206420,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613650.1;locus_tag=CYJ00_RS10185;partial=true;product=minor capsid protein;pseudo=true;start_range=.,206019;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	207076	207360	.	-	.	ID=gene-CYJ00_RS13740;Name=CYJ00_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13740
NZ_PJUS02000331.1	Protein Homology	CDS	207076	207360	.	-	0	ID=cds-WP_341351420.1;Parent=gene-CYJ00_RS13740;Dbxref=GenBank:WP_341351420.1;Name=WP_341351420.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ00_RS13740;product=ATP-binding protein;protein_id=WP_341351420.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	207866	208042	.	+	.	ID=gene-CYJ00_RS13745;Name=CYJ00_RS13745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13745;partial=true;pseudo=true;start_range=.,207866
NZ_PJUS02000331.1	Protein Homology	CDS	207866	208042	.	+	0	ID=cds-CYJ00_RS13745;Parent=gene-CYJ00_RS13745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.7;locus_tag=CYJ00_RS13745;partial=true;product=MFS transporter;pseudo=true;start_range=.,207866;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	208196	208528	.	-	.	ID=gene-CYJ00_RS10195;Name=CYJ00_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10195;old_locus_tag=CYJ00_010205
NZ_PJUS02000331.1	Protein Homology	CDS	208196	208528	.	-	0	ID=cds-WP_014613603.1;Parent=gene-CYJ00_RS10195;Dbxref=GenBank:WP_014613603.1;Name=WP_014613603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168390.1;locus_tag=CYJ00_RS10195;product=hypothetical protein;protein_id=WP_014613603.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	208626	209177	.	-	.	ID=gene-CYJ00_RS10200;Name=CYJ00_RS10200;end_range=209177,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10200;old_locus_tag=CYJ00_010210;partial=true;pseudo=true;start_range=.,208626
NZ_PJUS02000331.1	Protein Homology	CDS	208626	209177	.	-	0	ID=cds-CYJ00_RS10200;Parent=gene-CYJ00_RS10200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=209177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=CYJ00_RS10200;partial=true;product=phage lytic cycle repressor MrpR family protein;pseudo=true;start_range=.,208626;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	209174	209695	.	-	.	ID=gene-CYJ00_RS10205;Name=CYJ00_RS10205;end_range=209695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10205;old_locus_tag=CYJ00_010215;partial=true;pseudo=true;start_range=.,209174
NZ_PJUS02000331.1	Protein Homology	CDS	209174	209695	.	-	0	ID=cds-CYJ00_RS10205;Parent=gene-CYJ00_RS10205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=209695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ00_RS10205;partial=true;product=hypothetical protein;pseudo=true;start_range=.,209174;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	209686	210108	.	-	.	ID=gene-CYJ00_RS10210;Name=CYJ00_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10210;old_locus_tag=CYJ00_010220
NZ_PJUS02000331.1	Protein Homology	CDS	209686	210108	.	-	0	ID=cds-WP_198597693.1;Parent=gene-CYJ00_RS10210;Dbxref=GenBank:WP_198597693.1;Name=WP_198597693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=CYJ00_RS10210;product=YolD-like family protein;protein_id=WP_198597693.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	210259	210672	.	+	.	ID=gene-CYJ00_RS10215;Name=CYJ00_RS10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10215;old_locus_tag=CYJ00_010225;partial=true;pseudo=true;start_range=.,210259
NZ_PJUS02000331.1	Protein Homology	CDS	210259	210672	.	+	0	ID=cds-CYJ00_RS10215;Parent=gene-CYJ00_RS10215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447088.1;locus_tag=CYJ00_RS10215;partial=true;product=LrgB family protein;pseudo=true;start_range=.,210259;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	210848	211231	.	-	.	ID=gene-CYJ00_RS10220;Name=CYJ00_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10220;old_locus_tag=CYJ00_010230
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	210848	211231	.	-	0	ID=cds-WP_241956986.1;Parent=gene-CYJ00_RS10220;Dbxref=GenBank:WP_241956986.1;Name=WP_241956986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10220;product=hypothetical protein;protein_id=WP_241956986.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	211953	212216	.	+	.	ID=gene-CYJ00_RS10225;Name=CYJ00_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10225;old_locus_tag=CYJ00_010235
NZ_PJUS02000331.1	Protein Homology	CDS	211953	212216	.	+	0	ID=cds-WP_101431668.1;Parent=gene-CYJ00_RS10225;Dbxref=GenBank:WP_101431668.1;Name=WP_101431668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219837.1;locus_tag=CYJ00_RS10225;product=TcpD family membrane protein;protein_id=WP_101431668.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	212397	212903	.	+	.	ID=gene-CYJ00_RS10230;Name=CYJ00_RS10230;end_range=212903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10230;old_locus_tag=CYJ00_010240;partial=true;pseudo=true;start_range=.,212397
NZ_PJUS02000331.1	Protein Homology	CDS	212397	212903	.	+	0	ID=cds-CYJ00_RS10230;Parent=gene-CYJ00_RS10230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=212903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=CYJ00_RS10230;partial=true;product=zinc-binding metallopeptidase family protein;pseudo=true;start_range=.,212397;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	213053	213439	.	-	.	ID=gene-CYJ00_RS10235;Name=CYJ00_RS10235;end_range=213439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS10235;old_locus_tag=CYJ00_010245;partial=true;pseudo=true
NZ_PJUS02000331.1	Protein Homology	CDS	213053	213439	.	-	0	ID=cds-CYJ00_RS10235;Parent=gene-CYJ00_RS10235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;end_range=213439,.;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614676.1;locus_tag=CYJ00_RS10235;partial=true;product=S1 family peptidase;pseudo=true;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	213450	213920	.	+	.	ID=gene-CYJ00_RS10240;Name=CYJ00_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10240;old_locus_tag=CYJ00_010250
NZ_PJUS02000331.1	Protein Homology	CDS	213450	213920	.	+	0	ID=cds-WP_423830919.1;Parent=gene-CYJ00_RS10240;Dbxref=GenBank:WP_423830919.1;Name=WP_423830919.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.8;locus_tag=CYJ00_RS10240;product=IS110 family transposase;protein_id=WP_423830919.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	213995	214474	.	+	.	ID=gene-CYJ00_RS10245;Name=CYJ00_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10245;old_locus_tag=CYJ00_010255
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	213995	214474	.	+	0	ID=cds-WP_490327966.1;Parent=gene-CYJ00_RS10245;Dbxref=GenBank:WP_490327966.1;Name=WP_490327966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10245;product=hypothetical protein;protein_id=WP_490327966.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	214517	214879	.	+	.	ID=gene-CYJ00_RS10250;Name=CYJ00_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10250;old_locus_tag=CYJ00_010260
NZ_PJUS02000331.1	Protein Homology	CDS	214517	214879	.	+	0	ID=cds-WP_014614004.1;Parent=gene-CYJ00_RS10250;Dbxref=GenBank:WP_014614004.1;Name=WP_014614004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167762.1;locus_tag=CYJ00_RS10250;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014614004.1;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	215195	215407	.	+	.	ID=gene-CYJ00_RS14045;Name=CYJ00_RS14045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS14045;partial=true;pseudo=true;start_range=.,215195
NZ_PJUS02000331.1	Protein Homology	CDS	215195	215407	.	+	0	ID=cds-CYJ00_RS14045;Parent=gene-CYJ00_RS14045;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498689.1;locus_tag=CYJ00_RS14045;partial=true;product=ribosomal protection-like ABC-F family protein;pseudo=true;start_range=.,215195;transl_table=11
NZ_PJUS02000331.1	RefSeq	pseudogene	215485	215991	.	-	.	ID=gene-CYJ00_RS10255;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=pseudogene;locus_tag=CYJ00_RS10255;old_locus_tag=CYJ00_010265;partial=true;pseudo=true;start_range=.,215485
NZ_PJUS02000331.1	Protein Homology	CDS	215485	215991	.	-	0	ID=cds-CYJ00_RS10255;Parent=gene-CYJ00_RS10255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=CYJ00_RS10255;partial=true;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;pseudo=true;start_range=.,215485;transl_table=11
NZ_PJUS02000331.1	RefSeq	gene	215998	216372	.	-	.	ID=gene-CYJ00_RS10260;Name=CYJ00_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10260;old_locus_tag=CYJ00_010270
NZ_PJUS02000331.1	GeneMarkS-2+	CDS	215998	216372	.	-	0	ID=cds-WP_103332013.1;Parent=gene-CYJ00_RS10260;Dbxref=GenBank:WP_103332013.1;Name=WP_103332013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS10260;product=hypothetical protein;protein_id=WP_103332013.1;transl_table=11
##sequence-region NZ_PJUS02000022.1 1 284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000022.1	RefSeq	region	1	284	.	+	.	ID=NZ_PJUS02000022.1:1..284;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000022.1	RefSeq	gene	111	284	.	+	.	ID=gene-CYJ00_RS00640;Name=CYJ00_RS00640;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00640;old_locus_tag=CYJ00_000640;partial=true
NZ_PJUS02000022.1	Protein Homology	CDS	111	284	.	+	0	ID=cds-WP_423830910.1;Parent=gene-CYJ00_RS00640;Dbxref=GenBank:WP_423830910.1;Name=WP_423830910.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02276.1;locus_tag=CYJ00_RS00640;partial=true;product=YncE family protein;protein_id=WP_423830910.1;transl_table=11
##sequence-region NZ_PJUS02000244.1 1 244
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000244.1	RefSeq	region	1	244	.	+	.	ID=NZ_PJUS02000244.1:1..244;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000366.1 1 381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000366.1	RefSeq	region	1	381	.	+	.	ID=NZ_PJUS02000366.1:1..381;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000366.1	RefSeq	gene	1	339	.	-	.	ID=gene-CYJ00_RS11075;Name=CYJ00_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11075;old_locus_tag=CYJ00_011080;partial=true;start_range=.,1
NZ_PJUS02000366.1	Protein Homology	CDS	1	339	.	-	0	ID=cds-WP_101458081.1;Parent=gene-CYJ00_RS11075;Dbxref=GenBank:WP_101458081.1;Name=WP_101458081.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613405.1;locus_tag=CYJ00_RS11075;partial=true;product=MarR family transcriptional regulator;protein_id=WP_101458081.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000330.1 1 365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000330.1	RefSeq	region	1	365	.	+	.	ID=NZ_PJUS02000330.1:1..365;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000330.1	RefSeq	gene	1	327	.	+	.	ID=gene-CYJ00_RS08895;Name=CYJ00_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08895;old_locus_tag=CYJ00_008900;partial=true;start_range=.,1
NZ_PJUS02000330.1	Protein Homology	CDS	1	327	.	+	0	ID=cds-WP_133158342.1;Parent=gene-CYJ00_RS08895;Dbxref=GenBank:WP_133158342.1;Name=WP_133158342.1;Ontology_term=GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276926.1;locus_tag=CYJ00_RS08895;partial=true;product=tRNA-dependent cyclodipeptide synthase;protein_id=WP_133158342.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000065.1 1 297
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000065.1	RefSeq	region	1	297	.	+	.	ID=NZ_PJUS02000065.1:1..297;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000050.1 1 251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000050.1	RefSeq	region	1	251	.	+	.	ID=NZ_PJUS02000050.1:1..251;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000050.1	RefSeq	gene	1	251	.	+	.	ID=gene-CYJ00_RS13415;Name=CYJ00_RS13415;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13415;old_locus_tag=CYJ00_001430;partial=true;start_range=.,1
NZ_PJUS02000050.1	GeneMarkS-2+	CDS	1	251	.	+	1	ID=cds-WP_206748190.1;Parent=gene-CYJ00_RS13415;Dbxref=GenBank:WP_206748190.1;Name=WP_206748190.1;end_range=251,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13415;partial=true;product=hypothetical protein;protein_id=WP_206748190.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000082.1 1 10839
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000082.1	RefSeq	region	1	10839	.	+	.	ID=NZ_PJUS02000082.1:1..10839;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000082.1	RefSeq	gene	462	683	.	+	.	ID=gene-CYJ00_RS02225;Name=CYJ00_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02225;old_locus_tag=CYJ00_002225
NZ_PJUS02000082.1	Protein Homology	CDS	462	683	.	+	0	ID=cds-WP_014614664.1;Parent=gene-CYJ00_RS02225;Dbxref=GenBank:WP_014614664.1;Name=WP_014614664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614664.1;locus_tag=CYJ00_RS02225;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_014614664.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	pseudogene	700	1383	.	+	.	ID=gene-CYJ00_RS02230;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=CYJ00_RS02230;old_locus_tag=CYJ00_002230;partial=true;pseudo=true;start_range=.,700
NZ_PJUS02000082.1	Protein Homology	CDS	700	1383	.	+	0	ID=cds-CYJ00_RS02230;Parent=gene-CYJ00_RS02230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532733.1;locus_tag=CYJ00_RS02230;partial=true;product=twin-arginine translocase subunit TatC;pseudo=true;start_range=.,700;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	1425	3083	.	-	.	ID=gene-CYJ00_RS02235;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CYJ00_RS02235;old_locus_tag=CYJ00_002235
NZ_PJUS02000082.1	Protein Homology	CDS	1425	3083	.	-	0	ID=cds-WP_063278860.1;Parent=gene-CYJ00_RS02235;Dbxref=GenBank:WP_063278860.1;Name=WP_063278860.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CYJ00_RS02235;product=arginine--tRNA ligase;protein_id=WP_063278860.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	3085	3495	.	-	.	ID=gene-CYJ00_RS02240;Name=CYJ00_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02240;old_locus_tag=CYJ00_002240
NZ_PJUS02000082.1	Protein Homology	CDS	3085	3495	.	-	0	ID=cds-WP_014614667.1;Parent=gene-CYJ00_RS02240;Dbxref=GenBank:WP_014614667.1;Name=WP_014614667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220024.1;locus_tag=CYJ00_RS02240;product=YwiB family protein;protein_id=WP_014614667.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	3711	4226	.	-	.	ID=gene-CYJ00_RS02245;Name=CYJ00_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02245;old_locus_tag=CYJ00_002245
NZ_PJUS02000082.1	Protein Homology	CDS	3711	4226	.	-	0	ID=cds-WP_037543858.1;Parent=gene-CYJ00_RS02245;Dbxref=GenBank:WP_037543858.1;Name=WP_037543858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166270.1;locus_tag=CYJ00_RS02245;product=YwhD family protein;protein_id=WP_037543858.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	4304	5602	.	-	.	ID=gene-CYJ00_RS02250;Name=CYJ00_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02250;old_locus_tag=CYJ00_002250
NZ_PJUS02000082.1	Protein Homology	CDS	4304	5602	.	-	0	ID=cds-WP_015728676.1;Parent=gene-CYJ00_RS02250;Dbxref=GenBank:WP_015728676.1;Name=WP_015728676.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=CYJ00_RS02250;product=HD domain-containing protein;protein_id=WP_015728676.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	5625	6104	.	-	.	ID=gene-CYJ00_RS02255;Name=CYJ00_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02255;old_locus_tag=CYJ00_002255
NZ_PJUS02000082.1	Protein Homology	CDS	5625	6104	.	-	0	ID=cds-WP_014614670.1;Parent=gene-CYJ00_RS02255;Dbxref=GenBank:WP_014614670.1;Name=WP_014614670.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=CYJ00_RS02255;product=GNAT family N-acetyltransferase;protein_id=WP_014614670.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	6514	6849	.	-	.	ID=gene-CYJ00_RS02260;Name=CYJ00_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02260;old_locus_tag=CYJ00_002260
NZ_PJUS02000082.1	Protein Homology	CDS	6514	6849	.	-	0	ID=cds-WP_014614671.1;Parent=gene-CYJ00_RS02260;Dbxref=GenBank:WP_014614671.1;Name=WP_014614671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220022.1;locus_tag=CYJ00_RS02260;product=YuzB family protein;protein_id=WP_014614671.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	7471	8187	.	+	.	ID=gene-CYJ00_RS02265;Name=CYJ00_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02265;old_locus_tag=CYJ00_002265
NZ_PJUS02000082.1	Protein Homology	CDS	7471	8187	.	+	0	ID=cds-WP_070407487.1;Parent=gene-CYJ00_RS02265;Dbxref=GenBank:WP_070407487.1;Name=WP_070407487.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614672.1;locus_tag=CYJ00_RS02265;product=trypsin-like serine peptidase;protein_id=WP_070407487.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	8354	9079	.	+	.	ID=gene-CYJ00_RS02270;Name=CYJ00_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02270;old_locus_tag=CYJ00_002270
NZ_PJUS02000082.1	Protein Homology	CDS	8354	9079	.	+	0	ID=cds-WP_070407488.1;Parent=gene-CYJ00_RS02270;Dbxref=GenBank:WP_070407488.1;Name=WP_070407488.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728675.1;locus_tag=CYJ00_RS02270;product=trypsin-like serine peptidase;protein_id=WP_070407488.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	9402	10124	.	+	.	ID=gene-CYJ00_RS02275;Name=CYJ00_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02275;old_locus_tag=CYJ00_002275
NZ_PJUS02000082.1	Protein Homology	CDS	9402	10124	.	+	0	ID=cds-WP_065354557.1;Parent=gene-CYJ00_RS02275;Dbxref=GenBank:WP_065354557.1;Name=WP_065354557.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728674.1;locus_tag=CYJ00_RS02275;product=trypsin-like serine peptidase;protein_id=WP_065354557.1;transl_table=11
NZ_PJUS02000082.1	RefSeq	gene	10457	10839	.	+	.	ID=gene-CYJ00_RS02280;Name=CYJ00_RS02280;end_range=10839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02280;old_locus_tag=CYJ00_002280;partial=true
NZ_PJUS02000082.1	Protein Homology	CDS	10457	10839	.	+	0	ID=cds-WP_133158316.1;Parent=gene-CYJ00_RS02280;Dbxref=GenBank:WP_133158316.1;Name=WP_133158316.1;Ontology_term=GO:0006508,GO:0004252;end_range=10839,.;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614674.1;locus_tag=CYJ00_RS02280;partial=true;product=trypsin-like serine protease;protein_id=WP_133158316.1;transl_table=11
##sequence-region NZ_PJUS02000036.1 1 385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000036.1	RefSeq	region	1	385	.	+	.	ID=NZ_PJUS02000036.1:1..385;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000036.1	RefSeq	gene	1	385	.	-	.	ID=gene-CYJ00_RS01105;Name=CYJ00_RS01105;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01105;old_locus_tag=CYJ00_001105;partial=true;start_range=.,1
NZ_PJUS02000036.1	Protein Homology	CDS	1	385	.	-	0	ID=cds-WP_133158307.1;Parent=gene-CYJ00_RS01105;Dbxref=GenBank:WP_133158307.1;Name=WP_133158307.1;Ontology_term=GO:0055085,GO:0022857;end_range=385,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ00_RS01105;partial=true;product=MFS transporter;protein_id=WP_133158307.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000360.1 1 323
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000360.1	RefSeq	region	1	323	.	+	.	ID=NZ_PJUS02000360.1:1..323;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000360.1	RefSeq	gene	1	239	.	+	.	ID=gene-CYJ00_RS13505;Name=CYJ00_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13505;old_locus_tag=CYJ00_010860;partial=true;start_range=.,1
NZ_PJUS02000360.1	GeneMarkS-2+	CDS	1	239	.	+	2	ID=cds-WP_206748201.1;Parent=gene-CYJ00_RS13505;Dbxref=GenBank:WP_206748201.1;Name=WP_206748201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13505;partial=true;product=hypothetical protein;protein_id=WP_206748201.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000073.1 1 439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000073.1	RefSeq	region	1	439	.	+	.	ID=NZ_PJUS02000073.1:1..439;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000073.1	RefSeq	gene	1	439	.	-	.	ID=gene-CYJ00_RS01960;Name=CYJ00_RS01960;end_range=439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01960;old_locus_tag=CYJ00_001960;partial=true;start_range=.,1
NZ_PJUS02000073.1	Protein Homology	CDS	1	439	.	-	2	ID=cds-WP_198597667.1;Parent=gene-CYJ00_RS01960;Dbxref=GenBank:WP_198597667.1;Name=WP_198597667.1;end_range=439,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027488.7;locus_tag=CYJ00_RS01960;partial=true;product=Kiwa anti-phage protein KwaB-like domain-containing protein;protein_id=WP_198597667.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000243.1 1 342
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000243.1	RefSeq	region	1	342	.	+	.	ID=NZ_PJUS02000243.1:1..342;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000317.1 1 398
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000317.1	RefSeq	region	1	398	.	+	.	ID=NZ_PJUS02000317.1:1..398;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000317.1	RefSeq	gene	1	246	.	-	.	ID=gene-CYJ00_RS13630;Name=CYJ00_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13630;old_locus_tag=CYJ00_008480;partial=true;start_range=.,1
NZ_PJUS02000317.1	Protein Homology	CDS	1	246	.	-	0	ID=cds-WP_274539977.1;Parent=gene-CYJ00_RS13630;Dbxref=GenBank:WP_274539977.1;Name=WP_274539977.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ00_RS13630;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_274539977.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000242.1 1 11707
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000242.1	RefSeq	region	1	11707	.	+	.	ID=NZ_PJUS02000242.1:1..11707;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000242.1	RefSeq	gene	3	1079	.	-	.	ID=gene-CYJ00_RS06690;Name=CYJ00_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06690;old_locus_tag=CYJ00_006695
NZ_PJUS02000242.1	Protein Homology	CDS	3	1079	.	-	0	ID=cds-WP_015729484.1;Parent=gene-CYJ00_RS06690;Dbxref=GenBank:WP_015729484.1;Name=WP_015729484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=CYJ00_RS06690;product=alanine racemase;protein_id=WP_015729484.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	1083	2846	.	-	.	ID=gene-CYJ00_RS06695;Name=CYJ00_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06695;old_locus_tag=CYJ00_006700
NZ_PJUS02000242.1	Protein Homology	CDS	1083	2846	.	-	0	ID=cds-WP_101457771.1;Parent=gene-CYJ00_RS06695;Dbxref=GenBank:WP_101457771.1;Name=WP_101457771.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=CYJ00_RS06695;product=IucA/IucC family protein;protein_id=WP_101457771.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	2830	4014	.	-	.	ID=gene-CYJ00_RS06700;Name=CYJ00_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06700;old_locus_tag=CYJ00_006705
NZ_PJUS02000242.1	Protein Homology	CDS	2830	4014	.	-	0	ID=cds-WP_101457772.1;Parent=gene-CYJ00_RS06700;Dbxref=GenBank:WP_101457772.1;Name=WP_101457772.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613270.1;locus_tag=CYJ00_RS06700;product=MFS transporter;protein_id=WP_101457772.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	4115	6082	.	+	.	ID=gene-CYJ00_RS06705;Name=CYJ00_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06705;old_locus_tag=CYJ00_006710
NZ_PJUS02000242.1	Protein Homology	CDS	4115	6082	.	+	0	ID=cds-WP_101457773.1;Parent=gene-CYJ00_RS06705;Dbxref=GenBank:WP_101457773.1;Name=WP_101457773.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729487.1;locus_tag=CYJ00_RS06705;product=IucA/IucC family protein;protein_id=WP_101457773.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	6194	7339	.	+	.	ID=gene-CYJ00_RS06710;Name=CYJ00_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06710;old_locus_tag=CYJ00_006715
NZ_PJUS02000242.1	Protein Homology	CDS	6194	7339	.	+	0	ID=cds-WP_014613268.1;Parent=gene-CYJ00_RS06710;Dbxref=GenBank:WP_014613268.1;Name=WP_014613268.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613268.1;locus_tag=CYJ00_RS06710;product=MFS transporter;protein_id=WP_014613268.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	7411	7902	.	-	.	ID=gene-CYJ00_RS06715;Name=CYJ00_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06715;old_locus_tag=CYJ00_006720
NZ_PJUS02000242.1	Protein Homology	CDS	7411	7902	.	-	0	ID=cds-WP_100006574.1;Parent=gene-CYJ00_RS06715;Dbxref=GenBank:WP_100006574.1;Name=WP_100006574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CYJ00_RS06715;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_100006574.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	7956	8201	.	-	.	ID=gene-CYJ00_RS06720;Name=CYJ00_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06720;old_locus_tag=CYJ00_006725
NZ_PJUS02000242.1	Protein Homology	CDS	7956	8201	.	-	0	ID=cds-WP_015729488.1;Parent=gene-CYJ00_RS06720;Dbxref=GenBank:WP_015729488.1;Name=WP_015729488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426388.1;locus_tag=CYJ00_RS06720;product=DUF2273 domain-containing protein;protein_id=WP_015729488.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	8214	8756	.	-	.	ID=gene-CYJ00_RS06725;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=CYJ00_RS06725;old_locus_tag=CYJ00_006730
NZ_PJUS02000242.1	Protein Homology	CDS	8214	8756	.	-	0	ID=cds-WP_181397704.1;Parent=gene-CYJ00_RS06725;Dbxref=GenBank:WP_181397704.1;Name=WP_181397704.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=CYJ00_RS06725;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_181397704.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	9045	10559	.	-	.	ID=gene-CYJ00_RS06730;Name=CYJ00_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06730;old_locus_tag=CYJ00_006735
NZ_PJUS02000242.1	Protein Homology	CDS	9045	10559	.	-	0	ID=cds-WP_063282660.1;Parent=gene-CYJ00_RS06730;Dbxref=GenBank:WP_063282660.1;Name=WP_063282660.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169143.1;locus_tag=CYJ00_RS06730;product=BCCT family transporter;protein_id=WP_063282660.1;transl_table=11
NZ_PJUS02000242.1	RefSeq	gene	10616	11626	.	-	.	ID=gene-CYJ00_RS06735;Name=CYJ00_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06735;old_locus_tag=CYJ00_006740
NZ_PJUS02000242.1	Protein Homology	CDS	10616	11626	.	-	0	ID=cds-WP_101431509.1;Parent=gene-CYJ00_RS06735;Dbxref=GenBank:WP_101431509.1;Name=WP_101431509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=CYJ00_RS06735;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_101431509.1;transl_table=11
##sequence-region NZ_PJUS02000335.1 1 350
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000335.1	RefSeq	region	1	350	.	+	.	ID=NZ_PJUS02000335.1:1..350;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000292.1 1 283
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000292.1	RefSeq	region	1	283	.	+	.	ID=NZ_PJUS02000292.1:1..283;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000394.1 1 233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000394.1	RefSeq	region	1	233	.	+	.	ID=NZ_PJUS02000394.1:1..233;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000219.1 1 334
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000219.1	RefSeq	region	1	334	.	+	.	ID=NZ_PJUS02000219.1:1..334;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000219.1	RefSeq	gene	47	334	.	-	.	ID=gene-CYJ00_RS06100;Name=CYJ00_RS06100;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06100;old_locus_tag=CYJ00_006105;partial=true
NZ_PJUS02000219.1	Protein Homology	CDS	47	334	.	-	0	ID=cds-WP_133158332.1;Parent=gene-CYJ00_RS06100;Dbxref=GenBank:WP_133158332.1;Name=WP_133158332.1;end_range=334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368755.1;locus_tag=CYJ00_RS06100;partial=true;product=DUF3885 domain-containing protein;protein_id=WP_133158332.1;transl_table=11
##sequence-region NZ_PJUS02000266.1 1 365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000266.1	RefSeq	region	1	365	.	+	.	ID=NZ_PJUS02000266.1:1..365;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000266.1	RefSeq	gene	3	98	.	+	.	ID=gene-CYJ00_RS13940;Name=CYJ00_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13940;old_locus_tag=CYJ00_007160
NZ_PJUS02000266.1	Protein Homology	CDS	3	98	.	+	0	ID=cds-WP_101458082.1;Parent=gene-CYJ00_RS13940;Dbxref=GenBank:WP_101458082.1;Name=WP_101458082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.7;locus_tag=CYJ00_RS13940;product=putative holin-like toxin;protein_id=WP_101458082.1;transl_table=11
##sequence-region NZ_PJUS02000012.1 1 322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000012.1	RefSeq	region	1	322	.	+	.	ID=NZ_PJUS02000012.1:1..322;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000012.1	RefSeq	gene	1	322	.	+	.	ID=gene-CYJ00_RS13400;Name=CYJ00_RS13400;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13400;old_locus_tag=CYJ00_000380;partial=true;start_range=.,1
NZ_PJUS02000012.1	GeneMarkS-2+	CDS	1	322	.	+	2	ID=cds-WP_206748188.1;Parent=gene-CYJ00_RS13400;Dbxref=GenBank:WP_206748188.1;Name=WP_206748188.1;end_range=322,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13400;partial=true;product=hypothetical protein;protein_id=WP_206748188.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000369.1 1 245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000369.1	RefSeq	region	1	245	.	+	.	ID=NZ_PJUS02000369.1:1..245;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000369.1	RefSeq	pseudogene	1	245	.	+	.	ID=gene-CYJ00_RS11090;Name=CYJ00_RS11090;end_range=245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11090;old_locus_tag=CYJ00_011095;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000369.1	Protein Homology	CDS	1	245	.	+	2	ID=cds-CYJ00_RS11090;Parent=gene-CYJ00_RS11090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=CYJ00_RS11090;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000172.1 1 214
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000172.1	RefSeq	region	1	214	.	+	.	ID=NZ_PJUS02000172.1:1..214;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000328.1 1 8401
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000328.1	RefSeq	region	1	8401	.	+	.	ID=NZ_PJUS02000328.1:1..8401;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000328.1	RefSeq	gene	220	295	.	-	.	ID=gene-CYJ00_RS08800;Name=CYJ00_RS08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08800;old_locus_tag=CYJ00_008805
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	220	295	.	-	.	ID=rna-CYJ00_RS08800;Parent=gene-CYJ00_RS08800;anticodon=(pos:complement(260..262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08800;product=tRNA-Ala
NZ_PJUS02000328.1	tRNAscan-SE	exon	220	295	.	-	.	ID=exon-CYJ00_RS08800-1;Parent=rna-CYJ00_RS08800;anticodon=(pos:complement(260..262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08800;product=tRNA-Ala
NZ_PJUS02000328.1	RefSeq	gene	313	386	.	-	.	ID=gene-CYJ00_RS08805;Name=CYJ00_RS08805;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08805;old_locus_tag=CYJ00_008810
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	313	386	.	-	.	ID=rna-CYJ00_RS08805;Parent=gene-CYJ00_RS08805;anticodon=(pos:complement(350..352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08805;product=tRNA-Pro
NZ_PJUS02000328.1	tRNAscan-SE	exon	313	386	.	-	.	ID=exon-CYJ00_RS08805-1;Parent=rna-CYJ00_RS08805;anticodon=(pos:complement(350..352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08805;product=tRNA-Pro
NZ_PJUS02000328.1	RefSeq	gene	396	472	.	-	.	ID=gene-CYJ00_RS08810;Name=CYJ00_RS08810;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08810;old_locus_tag=CYJ00_008815
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	396	472	.	-	.	ID=rna-CYJ00_RS08810;Parent=gene-CYJ00_RS08810;anticodon=(pos:complement(436..438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08810;product=tRNA-Arg
NZ_PJUS02000328.1	tRNAscan-SE	exon	396	472	.	-	.	ID=exon-CYJ00_RS08810-1;Parent=rna-CYJ00_RS08810;anticodon=(pos:complement(436..438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08810;product=tRNA-Arg
NZ_PJUS02000328.1	RefSeq	gene	484	572	.	-	.	ID=gene-CYJ00_RS08815;Name=CYJ00_RS08815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08815;old_locus_tag=CYJ00_008820
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	484	572	.	-	.	ID=rna-CYJ00_RS08815;Parent=gene-CYJ00_RS08815;anticodon=(pos:complement(536..538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08815;product=tRNA-Leu
NZ_PJUS02000328.1	tRNAscan-SE	exon	484	572	.	-	.	ID=exon-CYJ00_RS08815-1;Parent=rna-CYJ00_RS08815;anticodon=(pos:complement(536..538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08815;product=tRNA-Leu
NZ_PJUS02000328.1	RefSeq	gene	581	655	.	-	.	ID=gene-CYJ00_RS08820;Name=CYJ00_RS08820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08820;old_locus_tag=CYJ00_008825
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	581	655	.	-	.	ID=rna-CYJ00_RS08820;Parent=gene-CYJ00_RS08820;anticodon=(pos:complement(621..623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08820;product=tRNA-Gly
NZ_PJUS02000328.1	tRNAscan-SE	exon	581	655	.	-	.	ID=exon-CYJ00_RS08820-1;Parent=rna-CYJ00_RS08820;anticodon=(pos:complement(621..623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08820;product=tRNA-Gly
NZ_PJUS02000328.1	RefSeq	gene	671	746	.	-	.	ID=gene-CYJ00_RS08825;Name=CYJ00_RS08825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08825;old_locus_tag=CYJ00_008830
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	671	746	.	-	.	ID=rna-CYJ00_RS08825;Parent=gene-CYJ00_RS08825;anticodon=(pos:complement(711..713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08825;product=tRNA-Lys
NZ_PJUS02000328.1	tRNAscan-SE	exon	671	746	.	-	.	ID=exon-CYJ00_RS08825-1;Parent=rna-CYJ00_RS08825;anticodon=(pos:complement(711..713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08825;product=tRNA-Lys
NZ_PJUS02000328.1	RefSeq	gene	750	824	.	-	.	ID=gene-CYJ00_RS08830;Name=CYJ00_RS08830;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08830;old_locus_tag=CYJ00_008835
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	750	824	.	-	.	ID=rna-CYJ00_RS08830;Parent=gene-CYJ00_RS08830;anticodon=(pos:complement(790..792));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08830;product=tRNA-Gln
NZ_PJUS02000328.1	tRNAscan-SE	exon	750	824	.	-	.	ID=exon-CYJ00_RS08830-1;Parent=rna-CYJ00_RS08830;anticodon=(pos:complement(790..792));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08830;product=tRNA-Gln
NZ_PJUS02000328.1	RefSeq	gene	829	912	.	-	.	ID=gene-CYJ00_RS08835;Name=CYJ00_RS08835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08835;old_locus_tag=CYJ00_008840
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	829	912	.	-	.	ID=rna-CYJ00_RS08835;Parent=gene-CYJ00_RS08835;anticodon=(pos:complement(876..878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08835;product=tRNA-Tyr
NZ_PJUS02000328.1	tRNAscan-SE	exon	829	912	.	-	.	ID=exon-CYJ00_RS08835-1;Parent=rna-CYJ00_RS08835;anticodon=(pos:complement(876..878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08835;product=tRNA-Tyr
NZ_PJUS02000328.1	RefSeq	gene	919	994	.	-	.	ID=gene-CYJ00_RS08840;Name=CYJ00_RS08840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08840;old_locus_tag=CYJ00_008845
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	919	994	.	-	.	ID=rna-CYJ00_RS08840;Parent=gene-CYJ00_RS08840;anticodon=(pos:complement(959..961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08840;product=tRNA-Thr
NZ_PJUS02000328.1	tRNAscan-SE	exon	919	994	.	-	.	ID=exon-CYJ00_RS08840-1;Parent=rna-CYJ00_RS08840;anticodon=(pos:complement(959..961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08840;product=tRNA-Thr
NZ_PJUS02000328.1	RefSeq	gene	997	1072	.	-	.	ID=gene-CYJ00_RS08845;Name=CYJ00_RS08845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ00_RS08845;old_locus_tag=CYJ00_008850
NZ_PJUS02000328.1	tRNAscan-SE	tRNA	997	1072	.	-	.	ID=rna-CYJ00_RS08845;Parent=gene-CYJ00_RS08845;anticodon=(pos:complement(1037..1039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08845;product=tRNA-Val
NZ_PJUS02000328.1	tRNAscan-SE	exon	997	1072	.	-	.	ID=exon-CYJ00_RS08845-1;Parent=rna-CYJ00_RS08845;anticodon=(pos:complement(1037..1039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ00_RS08845;product=tRNA-Val
NZ_PJUS02000328.1	RefSeq	gene	1085	1199	.	-	.	ID=gene-CYJ00_RS08850;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ00_RS08850;old_locus_tag=CYJ00_008855
NZ_PJUS02000328.1	cmsearch	rRNA	1085	1199	.	-	.	ID=rna-CYJ00_RS08850;Parent=gene-CYJ00_RS08850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08850;product=5S ribosomal RNA
NZ_PJUS02000328.1	cmsearch	exon	1085	1199	.	-	.	ID=exon-CYJ00_RS08850-1;Parent=rna-CYJ00_RS08850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08850;product=5S ribosomal RNA
NZ_PJUS02000328.1	RefSeq	gene	1611	3098	.	-	.	ID=gene-CYJ00_RS08855;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08855;old_locus_tag=CYJ00_008860
NZ_PJUS02000328.1	Protein Homology	CDS	1611	3098	.	-	0	ID=cds-WP_015728597.1;Parent=gene-CYJ00_RS08855;Dbxref=GenBank:WP_015728597.1;Name=WP_015728597.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499070.1;locus_tag=CYJ00_RS08855;product=lysine--tRNA ligase;protein_id=WP_015728597.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	3121	4113	.	-	.	ID=gene-CYJ00_RS08860;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08860;old_locus_tag=CYJ00_008865
NZ_PJUS02000328.1	Protein Homology	CDS	3121	4113	.	-	0	ID=cds-WP_014614788.1;Parent=gene-CYJ00_RS08860;Dbxref=GenBank:WP_014614788.1;Name=WP_014614788.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=CYJ00_RS08860;product=tRNA dihydrouridine synthase DusB;protein_id=WP_014614788.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	4158	4643	.	-	.	ID=gene-CYJ00_RS08865;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CYJ00_RS08865;old_locus_tag=CYJ00_008870
NZ_PJUS02000328.1	Protein Homology	CDS	4158	4643	.	-	0	ID=cds-WP_014614789.1;Parent=gene-CYJ00_RS08865;Dbxref=GenBank:WP_014614789.1;Name=WP_014614789.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165002.1;locus_tag=CYJ00_RS08865;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_014614789.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	4636	5007	.	-	.	ID=gene-CYJ00_RS08870;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08870;old_locus_tag=CYJ00_008875
NZ_PJUS02000328.1	Protein Homology	CDS	4636	5007	.	-	0	ID=cds-WP_014614790.1;Parent=gene-CYJ00_RS08870;Dbxref=GenBank:WP_014614790.1;Name=WP_014614790.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614790.1;locus_tag=CYJ00_RS08870;product=dihydroneopterin aldolase;protein_id=WP_014614790.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	4997	5800	.	-	.	ID=gene-CYJ00_RS08875;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CYJ00_RS08875;old_locus_tag=CYJ00_008880
NZ_PJUS02000328.1	Protein Homology	CDS	4997	5800	.	-	0	ID=cds-WP_014614791.1;Parent=gene-CYJ00_RS08875;Dbxref=GenBank:WP_014614791.1;Name=WP_014614791.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=CYJ00_RS08875;product=dihydropteroate synthase;protein_id=WP_014614791.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	6022	6951	.	-	.	ID=gene-CYJ00_RS08880;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CYJ00_RS08880;old_locus_tag=CYJ00_008885
NZ_PJUS02000328.1	Protein Homology	CDS	6022	6951	.	-	0	ID=cds-WP_014614792.1;Parent=gene-CYJ00_RS08880;Dbxref=GenBank:WP_014614792.1;Name=WP_014614792.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=CYJ00_RS08880;product=cysteine synthase A;protein_id=WP_014614792.1;transl_table=11
NZ_PJUS02000328.1	RefSeq	gene	7475	8359	.	-	.	ID=gene-CYJ00_RS08885;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CYJ00_RS08885;old_locus_tag=CYJ00_008890
NZ_PJUS02000328.1	Protein Homology	CDS	7475	8359	.	-	0	ID=cds-WP_014614793.1;Parent=gene-CYJ00_RS08885;Dbxref=GenBank:WP_014614793.1;Name=WP_014614793.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165006.1;locus_tag=CYJ00_RS08885;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014614793.1;transl_table=11
##sequence-region NZ_PJUS02000126.1 1 296
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000126.1	RefSeq	region	1	296	.	+	.	ID=NZ_PJUS02000126.1:1..296;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000126.1	RefSeq	gene	1	296	.	-	.	ID=gene-CYJ00_RS13430;Name=CYJ00_RS13430;end_range=296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13430;old_locus_tag=CYJ00_003560;partial=true;start_range=.,1
NZ_PJUS02000126.1	GeneMarkS-2+	CDS	1	296	.	-	0	ID=cds-WP_206748193.1;Parent=gene-CYJ00_RS13430;Dbxref=GenBank:WP_206748193.1;Name=WP_206748193.1;end_range=296,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13430;partial=true;product=hypothetical protein;protein_id=WP_206748193.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000039.1 1 233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000039.1	RefSeq	region	1	233	.	+	.	ID=NZ_PJUS02000039.1:1..233;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000255.1 1 303
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000255.1	RefSeq	region	1	303	.	+	.	ID=NZ_PJUS02000255.1:1..303;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000255.1	RefSeq	pseudogene	1	303	.	-	.	ID=gene-CYJ00_RS13460;Name=CYJ00_RS13460;end_range=303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13460;old_locus_tag=CYJ00_006990;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000255.1	Protein Homology	CDS	1	303	.	-	0	ID=cds-CYJ00_RS13460;Parent=gene-CYJ00_RS13460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610884.1;locus_tag=CYJ00_RS13460;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000018.1 1 231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000018.1	RefSeq	region	1	231	.	+	.	ID=NZ_PJUS02000018.1:1..231;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000018.1	RefSeq	gene	1	196	.	-	.	ID=gene-CYJ00_RS00535;Name=CYJ00_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00535;old_locus_tag=CYJ00_000535;partial=true;start_range=.,1
NZ_PJUS02000018.1	Protein Homology	CDS	1	196	.	-	0	ID=cds-WP_101458083.1;Parent=gene-CYJ00_RS00535;Dbxref=GenBank:WP_101458083.1;Name=WP_101458083.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587616.1;locus_tag=CYJ00_RS00535;partial=true;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_101458083.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000346.1 1 465
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000346.1	RefSeq	region	1	465	.	+	.	ID=NZ_PJUS02000346.1:1..465;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000143.1 1 427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000143.1	RefSeq	region	1	427	.	+	.	ID=NZ_PJUS02000143.1:1..427;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000143.1	RefSeq	gene	1	427	.	-	.	ID=gene-CYJ00_RS13105;Name=CYJ00_RS13105;end_range=427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13105;old_locus_tag=CYJ00_003940;partial=true;start_range=.,1
NZ_PJUS02000143.1	GeneMarkS-2+	CDS	1	427	.	-	2	ID=cds-WP_198597674.1;Parent=gene-CYJ00_RS13105;Dbxref=GenBank:WP_198597674.1;Name=WP_198597674.1;end_range=427,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13105;partial=true;product=hypothetical protein;protein_id=WP_198597674.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000275.1 1 339
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000275.1	RefSeq	region	1	339	.	+	.	ID=NZ_PJUS02000275.1:1..339;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000008.1 1 12843
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000008.1	RefSeq	region	1	12843	.	+	.	ID=NZ_PJUS02000008.1:1..12843;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000008.1	RefSeq	gene	619	1167	.	+	.	ID=gene-CYJ00_RS00255;Name=CYJ00_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00255;old_locus_tag=CYJ00_000255
NZ_PJUS02000008.1	Protein Homology	CDS	619	1167	.	+	0	ID=cds-WP_065354152.1;Parent=gene-CYJ00_RS00255;Dbxref=GenBank:WP_065354152.1;Name=WP_065354152.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613569.1;locus_tag=CYJ00_RS00255;product=histidine phosphatase family protein;protein_id=WP_065354152.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	1309	2379	.	+	.	ID=gene-CYJ00_RS00260;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CYJ00_RS00260;old_locus_tag=CYJ00_000260
NZ_PJUS02000008.1	Protein Homology	CDS	1309	2379	.	+	0	ID=cds-WP_014613570.1;Parent=gene-CYJ00_RS00260;Dbxref=GenBank:WP_014613570.1;Name=WP_014613570.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613570.1;locus_tag=CYJ00_RS00260;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_014613570.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	2407	3834	.	+	.	ID=gene-CYJ00_RS00265;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ00_RS00265;old_locus_tag=CYJ00_000265
NZ_PJUS02000008.1	Protein Homology	CDS	2407	3834	.	+	0	ID=cds-WP_014613571.1;Parent=gene-CYJ00_RS00265;Dbxref=GenBank:WP_014613571.1;Name=WP_014613571.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613571.1;locus_tag=CYJ00_RS00265;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014613571.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	3858	4136	.	+	.	ID=gene-CYJ00_RS00270;Name=CYJ00_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00270;old_locus_tag=CYJ00_000270
NZ_PJUS02000008.1	Protein Homology	CDS	3858	4136	.	+	0	ID=cds-WP_014613572.1;Parent=gene-CYJ00_RS00270;Dbxref=GenBank:WP_014613572.1;Name=WP_014613572.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613572.1;locus_tag=CYJ00_RS00270;product=PTS sugar transporter subunit IIB;protein_id=WP_014613572.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	4149	4616	.	+	.	ID=gene-CYJ00_RS00275;Name=CYJ00_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00275;old_locus_tag=CYJ00_000275
NZ_PJUS02000008.1	Protein Homology	CDS	4149	4616	.	+	0	ID=cds-WP_014613573.1;Parent=gene-CYJ00_RS00275;Dbxref=GenBank:WP_014613573.1;Name=WP_014613573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165934.1;locus_tag=CYJ00_RS00275;product=PTS sugar transporter subunit IIA;protein_id=WP_014613573.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	4633	5271	.	+	.	ID=gene-CYJ00_RS00280;Name=CYJ00_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00280;old_locus_tag=CYJ00_000280
NZ_PJUS02000008.1	Protein Homology	CDS	4633	5271	.	+	0	ID=cds-WP_063284452.1;Parent=gene-CYJ00_RS00280;Dbxref=GenBank:WP_063284452.1;Name=WP_063284452.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729352.1;locus_tag=CYJ00_RS00280;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_063284452.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	5271	6134	.	+	.	ID=gene-CYJ00_RS00285;Name=CYJ00_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00285;old_locus_tag=CYJ00_000285
NZ_PJUS02000008.1	Protein Homology	CDS	5271	6134	.	+	0	ID=cds-WP_099986617.1;Parent=gene-CYJ00_RS00285;Dbxref=GenBank:WP_099986617.1;Name=WP_099986617.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729351.1;locus_tag=CYJ00_RS00285;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_099986617.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	6127	6822	.	+	.	ID=gene-CYJ00_RS00290;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00290;old_locus_tag=CYJ00_000290
NZ_PJUS02000008.1	Protein Homology	CDS	6127	6822	.	+	0	ID=cds-WP_014613576.1;Parent=gene-CYJ00_RS00290;Dbxref=GenBank:WP_014613576.1;Name=WP_014613576.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219668.1;locus_tag=CYJ00_RS00290;product=L-ribulose-5-phosphate 4-epimerase AraD;protein_id=WP_014613576.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	6886	8520	.	+	.	ID=gene-CYJ00_RS00295;Name=CYJ00_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00295;old_locus_tag=CYJ00_000295
NZ_PJUS02000008.1	Protein Homology	CDS	6886	8520	.	+	0	ID=cds-WP_015729350.1;Parent=gene-CYJ00_RS00295;Dbxref=GenBank:WP_015729350.1;Name=WP_015729350.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165938.1;locus_tag=CYJ00_RS00295;product=BglG family transcription antiterminator;protein_id=WP_015729350.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	8695	10098	.	+	.	ID=gene-CYJ00_RS00300;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CYJ00_RS00300;old_locus_tag=CYJ00_000300
NZ_PJUS02000008.1	Protein Homology	CDS	8695	10098	.	+	0	ID=cds-WP_014613578.1;Parent=gene-CYJ00_RS00300;Dbxref=GenBank:WP_014613578.1;Name=WP_014613578.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641589.1;locus_tag=CYJ00_RS00300;product=o-succinylbenzoate--CoA ligase;protein_id=WP_014613578.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	10101	11087	.	+	.	ID=gene-CYJ00_RS00305;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00305;old_locus_tag=CYJ00_000305
NZ_PJUS02000008.1	Protein Homology	CDS	10101	11087	.	+	0	ID=cds-WP_014613579.1;Parent=gene-CYJ00_RS00305;Dbxref=GenBank:WP_014613579.1;Name=WP_014613579.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=CYJ00_RS00305;product=o-succinylbenzoate synthase;protein_id=WP_014613579.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	11063	11314	.	-	.	ID=gene-CYJ00_RS00310;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00310;old_locus_tag=CYJ00_000310
NZ_PJUS02000008.1	Protein Homology	CDS	11063	11314	.	-	0	ID=cds-WP_014613580.1;Parent=gene-CYJ00_RS00310;Dbxref=GenBank:WP_014613580.1;Name=WP_014613580.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=CYJ00_RS00310;product=membrane protein insertion efficiency factor YidD;protein_id=WP_014613580.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	11373	11843	.	+	.	ID=gene-CYJ00_RS00315;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00315;old_locus_tag=CYJ00_000315
NZ_PJUS02000008.1	Protein Homology	CDS	11373	11843	.	+	0	ID=cds-WP_014613581.1;Parent=gene-CYJ00_RS00315;Dbxref=GenBank:WP_014613581.1;Name=WP_014613581.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=CYJ00_RS00315;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_014613581.1;transl_table=11
NZ_PJUS02000008.1	RefSeq	gene	11824	12600	.	+	.	ID=gene-CYJ00_RS00320;Name=CYJ00_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00320;old_locus_tag=CYJ00_000320
NZ_PJUS02000008.1	Protein Homology	CDS	11824	12600	.	+	0	ID=cds-WP_041613219.1;Parent=gene-CYJ00_RS00320;Dbxref=GenBank:WP_041613219.1;Name=WP_041613219.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219665.1;locus_tag=CYJ00_RS00320;product=alpha/beta hydrolase family protein;protein_id=WP_041613219.1;transl_table=11
##sequence-region NZ_PJUS02000130.1 1 234
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000130.1	RefSeq	region	1	234	.	+	.	ID=NZ_PJUS02000130.1:1..234;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000130.1	RefSeq	gene	1	234	.	+	.	ID=gene-CYJ00_RS13435;Name=CYJ00_RS13435;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13435;old_locus_tag=CYJ00_003635;partial=true;start_range=.,1
NZ_PJUS02000130.1	GeneMarkS-2+	CDS	1	234	.	+	2	ID=cds-WP_206748194.1;Parent=gene-CYJ00_RS13435;Dbxref=GenBank:WP_206748194.1;Name=WP_206748194.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13435;partial=true;product=hypothetical protein;protein_id=WP_206748194.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000167.1 1 228
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000167.1	RefSeq	region	1	228	.	+	.	ID=NZ_PJUS02000167.1:1..228;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000136.1 1 308
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000136.1	RefSeq	region	1	308	.	+	.	ID=NZ_PJUS02000136.1:1..308;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000136.1	RefSeq	gene	1	281	.	-	.	ID=gene-CYJ00_RS03745;Name=CYJ00_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03745;old_locus_tag=CYJ00_003750;partial=true;start_range=.,1
NZ_PJUS02000136.1	Protein Homology	CDS	1	281	.	-	0	ID=cds-WP_241956938.1;Parent=gene-CYJ00_RS03745;Dbxref=GenBank:WP_241956938.1;Name=WP_241956938.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012869.7;locus_tag=CYJ00_RS03745;partial=true;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_241956938.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000323.1 1 354
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000323.1	RefSeq	region	1	354	.	+	.	ID=NZ_PJUS02000323.1:1..354;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000323.1	RefSeq	gene	1	354	.	+	.	ID=gene-CYJ00_RS13130;Name=CYJ00_RS13130;end_range=354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13130;old_locus_tag=CYJ00_008640;partial=true;start_range=.,1
NZ_PJUS02000323.1	Protein Homology	CDS	1	354	.	+	0	ID=cds-WP_157939008.1;Parent=gene-CYJ00_RS13130;Dbxref=GenBank:WP_157939008.1;Name=WP_157939008.1;end_range=354,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013341.7;locus_tag=CYJ00_RS13130;partial=true;product=RIO1 family regulatory kinase/ATPase domain-containing protein;protein_id=WP_157939008.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000182.1 1 236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000182.1	RefSeq	region	1	236	.	+	.	ID=NZ_PJUS02000182.1:1..236;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000182.1	RefSeq	pseudogene	1	212	.	-	.	ID=gene-CYJ00_RS05020;Name=CYJ00_RS05020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS05020;old_locus_tag=CYJ00_005025;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000182.1	GeneMarkS-2+	CDS	1	212	.	-	0	ID=cds-CYJ00_RS05020;Parent=gene-CYJ00_RS05020;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS05020;partial=true;product=ATP-binding domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000324.1 1 14232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000324.1	RefSeq	region	1	14232	.	+	.	ID=NZ_PJUS02000324.1:1..14232;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000324.1	RefSeq	pseudogene	1	136	.	+	.	ID=gene-CYJ00_RS13635;Name=CYJ00_RS13635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13635;old_locus_tag=CYJ00_008645;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000324.1	Protein Homology	CDS	1	136	.	+	1	ID=cds-CYJ00_RS13635;Parent=gene-CYJ00_RS13635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613623.1;locus_tag=CYJ00_RS13635;partial=true;product=peptidase M28;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	148	456	.	+	.	ID=gene-CYJ00_RS08645;Name=CYJ00_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08645;old_locus_tag=CYJ00_008650
NZ_PJUS02000324.1	Protein Homology	CDS	148	456	.	+	0	ID=cds-WP_063278939.1;Parent=gene-CYJ00_RS08645;Dbxref=GenBank:WP_063278939.1;Name=WP_063278939.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168411.1;locus_tag=CYJ00_RS08645;product=thioredoxin family protein;protein_id=WP_063278939.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	549	1415	.	+	.	ID=gene-CYJ00_RS08650;Name=CYJ00_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08650;old_locus_tag=CYJ00_008655
NZ_PJUS02000324.1	Protein Homology	CDS	549	1415	.	+	0	ID=cds-WP_014613625.1;Parent=gene-CYJ00_RS08650;Dbxref=GenBank:WP_014613625.1;Name=WP_014613625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=CYJ00_RS08650;product=DUF1444 domain-containing protein;protein_id=WP_014613625.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	1421	2020	.	+	.	ID=gene-CYJ00_RS08655;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=CYJ00_RS08655;old_locus_tag=CYJ00_008660
NZ_PJUS02000324.1	Protein Homology	CDS	1421	2020	.	+	0	ID=cds-WP_014613626.1;Parent=gene-CYJ00_RS08655;Dbxref=GenBank:WP_014613626.1;Name=WP_014613626.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=CYJ00_RS08655;product=YtpR family tRNA-binding protein;protein_id=WP_014613626.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	2040	5282	.	+	.	ID=gene-CYJ00_RS08660;Name=CYJ00_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08660;old_locus_tag=CYJ00_008665
NZ_PJUS02000324.1	Protein Homology	CDS	2040	5282	.	+	0	ID=cds-WP_101457388.1;Parent=gene-CYJ00_RS08660;Dbxref=GenBank:WP_101457388.1;Name=WP_101457388.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=CYJ00_RS08660;product=DNA translocase FtsK;protein_id=WP_101457388.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	5311	6624	.	+	.	ID=gene-CYJ00_RS08665;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CYJ00_RS08665;old_locus_tag=CYJ00_008670
NZ_PJUS02000324.1	Protein Homology	CDS	5311	6624	.	+	0	ID=cds-WP_014613628.1;Parent=gene-CYJ00_RS08665;Dbxref=GenBank:WP_014613628.1;Name=WP_014613628.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484970.1;locus_tag=CYJ00_RS08665;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014613628.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	6703	7311	.	+	.	ID=gene-CYJ00_RS08670;Name=CYJ00_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08670;old_locus_tag=CYJ00_008675
NZ_PJUS02000324.1	Protein Homology	CDS	6703	7311	.	+	0	ID=cds-WP_014613629.1;Parent=gene-CYJ00_RS08670;Dbxref=GenBank:WP_014613629.1;Name=WP_014613629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434851.1;locus_tag=CYJ00_RS08670;product=DUF948 domain-containing protein;protein_id=WP_014613629.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	7407	8504	.	+	.	ID=gene-CYJ00_RS08675;Name=CYJ00_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08675;old_locus_tag=CYJ00_008680
NZ_PJUS02000324.1	Protein Homology	CDS	7407	8504	.	+	0	ID=cds-WP_101457775.1;Parent=gene-CYJ00_RS08675;Dbxref=GenBank:WP_101457775.1;Name=WP_101457775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729328.1;locus_tag=CYJ00_RS08675;product=hypothetical protein;protein_id=WP_101457775.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	8824	9915	.	+	.	ID=gene-CYJ00_RS08680;Name=CYJ00_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08680;old_locus_tag=CYJ00_008685
NZ_PJUS02000324.1	Protein Homology	CDS	8824	9915	.	+	0	ID=cds-WP_014613631.1;Parent=gene-CYJ00_RS08680;Dbxref=GenBank:WP_014613631.1;Name=WP_014613631.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=CYJ00_RS08680;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_014613631.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	10323	11312	.	+	.	ID=gene-CYJ00_RS08685;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS08685;old_locus_tag=CYJ00_008690
NZ_PJUS02000324.1	Protein Homology	CDS	10323	11312	.	+	0	ID=cds-WP_014613632.1;Parent=gene-CYJ00_RS08685;Dbxref=GenBank:WP_014613632.1;Name=WP_014613632.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503626.1;locus_tag=CYJ00_RS08685;product=catabolite control protein A;protein_id=WP_014613632.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	11431	12588	.	-	.	ID=gene-CYJ00_RS08690;Name=CYJ00_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08690;old_locus_tag=CYJ00_008695
NZ_PJUS02000324.1	Protein Homology	CDS	11431	12588	.	-	0	ID=cds-WP_101457776.1;Parent=gene-CYJ00_RS08690;Dbxref=GenBank:WP_101457776.1;Name=WP_101457776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165044.1;locus_tag=CYJ00_RS08690;product=acetoin utilization protein AcuC;protein_id=WP_101457776.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	12602	13234	.	-	.	ID=gene-CYJ00_RS08695;Name=CYJ00_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08695;old_locus_tag=CYJ00_008700
NZ_PJUS02000324.1	Protein Homology	CDS	12602	13234	.	-	0	ID=cds-WP_015729326.1;Parent=gene-CYJ00_RS08695;Dbxref=GenBank:WP_015729326.1;Name=WP_015729326.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=CYJ00_RS08695;product=GNAT family N-acetyltransferase;protein_id=WP_015729326.1;transl_table=11
NZ_PJUS02000324.1	RefSeq	gene	13401	14232	.	+	.	ID=gene-CYJ00_RS08700;Name=CYJ00_RS08700;end_range=14232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08700;old_locus_tag=CYJ00_008705;partial=true
NZ_PJUS02000324.1	Protein Homology	CDS	13401	14232	.	+	0	ID=cds-WP_157939009.1;Parent=gene-CYJ00_RS08700;Dbxref=GenBank:WP_157939009.1;Name=WP_157939009.1;end_range=14232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000862099.1;locus_tag=CYJ00_RS08700;partial=true;product=AMP-binding protein;protein_id=WP_157939009.1;transl_table=11
##sequence-region NZ_PJUS02000352.1 1 282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000352.1	RefSeq	region	1	282	.	+	.	ID=NZ_PJUS02000352.1:1..282;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000352.1	RefSeq	gene	68	282	.	-	.	ID=gene-CYJ00_RS10710;Name=CYJ00_RS10710;end_range=282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10710;old_locus_tag=CYJ00_010715;partial=true
NZ_PJUS02000352.1	Protein Homology	CDS	68	282	.	-	2	ID=cds-WP_101458084.1;Parent=gene-CYJ00_RS10710;Dbxref=GenBank:WP_101458084.1;Name=WP_101458084.1;end_range=282,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024424.7;locus_tag=CYJ00_RS10710;partial=true;product=DUF3884 family protein;protein_id=WP_101458084.1;transl_table=11
##sequence-region NZ_PJUS02000428.1 1 10044
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000428.1	RefSeq	region	1	10044	.	+	.	ID=NZ_PJUS02000428.1:1..10044;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000428.1	RefSeq	gene	122	793	.	+	.	ID=gene-CYJ00_RS12625;Name=CYJ00_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12625;old_locus_tag=CYJ00_012630
NZ_PJUS02000428.1	Protein Homology	CDS	122	793	.	+	0	ID=cds-WP_014613176.1;Parent=gene-CYJ00_RS12625;Dbxref=GenBank:WP_014613176.1;Name=WP_014613176.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166584.1;locus_tag=CYJ00_RS12625;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613176.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	774	1637	.	+	.	ID=gene-CYJ00_RS12630;Name=CYJ00_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12630;old_locus_tag=CYJ00_012635
NZ_PJUS02000428.1	Protein Homology	CDS	774	1637	.	+	0	ID=cds-WP_014613177.1;Parent=gene-CYJ00_RS12630;Dbxref=GenBank:WP_014613177.1;Name=WP_014613177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613177.1;locus_tag=CYJ00_RS12630;product=ROK family protein;protein_id=WP_014613177.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	1718	2278	.	+	.	ID=gene-CYJ00_RS12635;Name=CYJ00_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12635;old_locus_tag=CYJ00_012640
NZ_PJUS02000428.1	Protein Homology	CDS	1718	2278	.	+	0	ID=cds-WP_037542405.1;Parent=gene-CYJ00_RS12635;Dbxref=GenBank:WP_037542405.1;Name=WP_037542405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=CYJ00_RS12635;product=biotin transporter BioY;protein_id=WP_037542405.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	2301	3074	.	+	.	ID=gene-CYJ00_RS12640;Name=CYJ00_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12640;old_locus_tag=CYJ00_012645
NZ_PJUS02000428.1	Protein Homology	CDS	2301	3074	.	+	0	ID=cds-WP_065354083.1;Parent=gene-CYJ00_RS12640;Dbxref=GenBank:WP_065354083.1;Name=WP_065354083.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729531.1;locus_tag=CYJ00_RS12640;product=GNAT family N-acetyltransferase;protein_id=WP_065354083.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	3152	3949	.	-	.	ID=gene-CYJ00_RS12645;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CYJ00_RS12645;old_locus_tag=CYJ00_012650
NZ_PJUS02000428.1	Protein Homology	CDS	3152	3949	.	-	0	ID=cds-WP_015729530.1;Parent=gene-CYJ00_RS12645;Dbxref=GenBank:WP_015729530.1;Name=WP_015729530.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729530.1;locus_tag=CYJ00_RS12645;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_015729530.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	4108	5142	.	+	.	ID=gene-CYJ00_RS12650;Name=CYJ00_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12650;old_locus_tag=CYJ00_012655
NZ_PJUS02000428.1	Protein Homology	CDS	4108	5142	.	+	0	ID=cds-WP_020220286.1;Parent=gene-CYJ00_RS12650;Dbxref=GenBank:WP_020220286.1;Name=WP_020220286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220286.1;locus_tag=CYJ00_RS12650;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220286.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	5185	6351	.	+	.	ID=gene-CYJ00_RS12655;Name=CYJ00_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12655;old_locus_tag=CYJ00_012660
NZ_PJUS02000428.1	Protein Homology	CDS	5185	6351	.	+	0	ID=cds-WP_014613182.1;Parent=gene-CYJ00_RS12655;Dbxref=GenBank:WP_014613182.1;Name=WP_014613182.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729528.1;locus_tag=CYJ00_RS12655;product=galactokinase;protein_id=WP_014613182.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	6367	7359	.	+	.	ID=gene-CYJ00_RS12660;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CYJ00_RS12660;old_locus_tag=CYJ00_012665
NZ_PJUS02000428.1	Protein Homology	CDS	6367	7359	.	+	0	ID=cds-WP_101457777.1;Parent=gene-CYJ00_RS12660;Dbxref=GenBank:WP_101457777.1;Name=WP_101457777.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613183.1;locus_tag=CYJ00_RS12660;product=UDP-glucose 4-epimerase GalE;protein_id=WP_101457777.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	7372	8871	.	+	.	ID=gene-CYJ00_RS12665;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CYJ00_RS12665;old_locus_tag=CYJ00_012670
NZ_PJUS02000428.1	Protein Homology	CDS	7372	8871	.	+	0	ID=cds-WP_100006550.1;Parent=gene-CYJ00_RS12665;Dbxref=GenBank:WP_100006550.1;Name=WP_100006550.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729526.1;locus_tag=CYJ00_RS12665;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_100006550.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	gene	8962	9735	.	+	.	ID=gene-CYJ00_RS12670;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CYJ00_RS12670;old_locus_tag=CYJ00_012675
NZ_PJUS02000428.1	Protein Homology	CDS	8962	9735	.	+	0	ID=cds-WP_101457778.1;Parent=gene-CYJ00_RS12670;Dbxref=GenBank:WP_101457778.1;Name=WP_101457778.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=CYJ00_RS12670;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_101457778.1;transl_table=11
NZ_PJUS02000428.1	RefSeq	pseudogene	9745	10044	.	+	.	ID=gene-CYJ00_RS12675;Name=CYJ00_RS12675;end_range=10044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS12675;old_locus_tag=CYJ00_012680;partial=true;pseudo=true
NZ_PJUS02000428.1	Protein Homology	CDS	9745	10044	.	+	0	ID=cds-CYJ00_RS12675;Parent=gene-CYJ00_RS12675;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166594.1;locus_tag=CYJ00_RS12675;partial=true;product=molybdate ABC transporter permease subunit;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000283.1 1 280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000283.1	RefSeq	region	1	280	.	+	.	ID=NZ_PJUS02000283.1:1..280;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000283.1	RefSeq	gene	66	269	.	-	.	ID=gene-CYJ00_RS13610;Name=CYJ00_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13610;old_locus_tag=CYJ00_007620
NZ_PJUS02000283.1	Protein Homology	CDS	66	269	.	-	0	ID=cds-WP_065354722.1;Parent=gene-CYJ00_RS13610;Dbxref=GenBank:WP_065354722.1;Name=WP_065354722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613647.1;locus_tag=CYJ00_RS13610;product=hypothetical protein;protein_id=WP_065354722.1;transl_table=11
##sequence-region NZ_PJUS02000336.1 1 261
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000336.1	RefSeq	region	1	261	.	+	.	ID=NZ_PJUS02000336.1:1..261;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
##sequence-region NZ_PJUS02000105.1 1 211
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000105.1	RefSeq	region	1	211	.	+	.	ID=NZ_PJUS02000105.1:1..211;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000105.1	RefSeq	gene	1	211	.	-	.	ID=gene-CYJ00_RS13425;Name=CYJ00_RS13425;end_range=211,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13425;partial=true;start_range=.,1
NZ_PJUS02000105.1	Protein Homology	CDS	1	211	.	-	0	ID=cds-WP_206748192.1;Parent=gene-CYJ00_RS13425;Dbxref=GenBank:WP_206748192.1;Name=WP_206748192.1;end_range=211,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055273.1;locus_tag=CYJ00_RS13425;partial=true;product=KwaA family protein;protein_id=WP_206748192.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000091.1 1 11299
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000091.1	RefSeq	region	1	11299	.	+	.	ID=NZ_PJUS02000091.1:1..11299;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000091.1	RefSeq	gene	270	1280	.	+	.	ID=gene-CYJ00_RS02380;Name=CYJ00_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02380;old_locus_tag=CYJ00_002380
NZ_PJUS02000091.1	Protein Homology	CDS	270	1280	.	+	0	ID=cds-WP_014614314.1;Parent=gene-CYJ00_RS02380;Dbxref=GenBank:WP_014614314.1;Name=WP_014614314.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=CYJ00_RS02380;product=acyltransferase family protein;protein_id=WP_014614314.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	1395	2555	.	+	.	ID=gene-CYJ00_RS02385;Name=CYJ00_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02385;old_locus_tag=CYJ00_002385
NZ_PJUS02000091.1	Protein Homology	CDS	1395	2555	.	+	0	ID=cds-WP_063278799.1;Parent=gene-CYJ00_RS02385;Dbxref=GenBank:WP_063278799.1;Name=WP_063278799.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165632.1;locus_tag=CYJ00_RS02385;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_063278799.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	2745	3563	.	-	.	ID=gene-CYJ00_RS02390;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02390;old_locus_tag=CYJ00_002390
NZ_PJUS02000091.1	Protein Homology	CDS	2745	3563	.	-	0	ID=cds-WP_014614316.1;Parent=gene-CYJ00_RS02390;Dbxref=GenBank:WP_014614316.1;Name=WP_014614316.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CYJ00_RS02390;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014614316.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	3580	4371	.	-	.	ID=gene-CYJ00_RS02395;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CYJ00_RS02395;old_locus_tag=CYJ00_002395
NZ_PJUS02000091.1	Protein Homology	CDS	3580	4371	.	-	0	ID=cds-WP_063284629.1;Parent=gene-CYJ00_RS02395;Dbxref=GenBank:WP_063284629.1;Name=WP_063284629.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220255.1;locus_tag=CYJ00_RS02395;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_063284629.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	4358	6028	.	-	.	ID=gene-CYJ00_RS02400;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CYJ00_RS02400;old_locus_tag=CYJ00_002400
NZ_PJUS02000091.1	Protein Homology	CDS	4358	6028	.	-	0	ID=cds-WP_014614318.1;Parent=gene-CYJ00_RS02400;Dbxref=GenBank:WP_014614318.1;Name=WP_014614318.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165634.1;locus_tag=CYJ00_RS02400;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_014614318.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	6021	7379	.	-	.	ID=gene-CYJ00_RS02405;Name=CYJ00_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02405;old_locus_tag=CYJ00_002405
NZ_PJUS02000091.1	Protein Homology	CDS	6021	7379	.	-	0	ID=cds-WP_096536173.1;Parent=gene-CYJ00_RS02405;Dbxref=GenBank:WP_096536173.1;Name=WP_096536173.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=CYJ00_RS02405;product=isochorismate synthase;protein_id=WP_096536173.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	7553	8491	.	+	.	ID=gene-CYJ00_RS02410;Name=CYJ00_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02410;old_locus_tag=CYJ00_002410
NZ_PJUS02000091.1	Protein Homology	CDS	7553	8491	.	+	0	ID=cds-WP_014614320.1;Parent=gene-CYJ00_RS02410;Dbxref=GenBank:WP_014614320.1;Name=WP_014614320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=CYJ00_RS02410;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_014614320.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	8807	9571	.	-	.	ID=gene-CYJ00_RS02415;Name=CYJ00_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02415;old_locus_tag=CYJ00_002415
NZ_PJUS02000091.1	Protein Homology	CDS	8807	9571	.	-	0	ID=cds-WP_081248062.1;Parent=gene-CYJ00_RS02415;Dbxref=GenBank:WP_081248062.1;Name=WP_081248062.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165637.1;locus_tag=CYJ00_RS02415;product=ABC transporter permease;protein_id=WP_081248062.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	9568	10218	.	-	.	ID=gene-CYJ00_RS02420;Name=CYJ00_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02420;old_locus_tag=CYJ00_002420
NZ_PJUS02000091.1	Protein Homology	CDS	9568	10218	.	-	0	ID=cds-WP_014614322.1;Parent=gene-CYJ00_RS02420;Dbxref=GenBank:WP_014614322.1;Name=WP_014614322.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=CYJ00_RS02420;product=ABC transporter ATP-binding protein;protein_id=WP_014614322.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	10211	10786	.	-	.	ID=gene-CYJ00_RS02425;Name=CYJ00_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02425;old_locus_tag=CYJ00_002425
NZ_PJUS02000091.1	Protein Homology	CDS	10211	10786	.	-	0	ID=cds-WP_020220256.1;Parent=gene-CYJ00_RS02425;Dbxref=GenBank:WP_020220256.1;Name=WP_020220256.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=CYJ00_RS02425;product=GNAT family N-acetyltransferase;protein_id=WP_020220256.1;transl_table=11
NZ_PJUS02000091.1	RefSeq	gene	11132	11299	.	-	.	ID=gene-CYJ00_RS02430;Name=CYJ00_RS02430;end_range=11299,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02430;old_locus_tag=CYJ00_002430;partial=true
NZ_PJUS02000091.1	Protein Homology	CDS	11132	11299	.	-	0	ID=cds-WP_198597669.1;Parent=gene-CYJ00_RS02430;Dbxref=GenBank:WP_198597669.1;Name=WP_198597669.1;Ontology_term=GO:0045892,GO:0003677;end_range=11299,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495224.1;locus_tag=CYJ00_RS02430;partial=true;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=WP_198597669.1;transl_table=11
##sequence-region NZ_PJUS02000357.1 1 298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000357.1	RefSeq	region	1	298	.	+	.	ID=NZ_PJUS02000357.1:1..298;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000357.1	RefSeq	gene	1	286	.	-	.	ID=gene-CYJ00_RS13165;Name=CYJ00_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13165;old_locus_tag=CYJ00_010835;partial=true;start_range=.,1
NZ_PJUS02000357.1	Protein Homology	CDS	1	286	.	-	0	ID=cds-WP_490327968.1;Parent=gene-CYJ00_RS13165;Dbxref=GenBank:WP_490327968.1;Name=WP_490327968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=CYJ00_RS13165;partial=true;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_490327968.1;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000297.1 1 225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000297.1	RefSeq	region	1	225	.	+	.	ID=NZ_PJUS02000297.1:1..225;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000297.1	RefSeq	pseudogene	1	225	.	-	.	ID=gene-CYJ00_RS07875;Name=CYJ00_RS07875;end_range=225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS07875;old_locus_tag=CYJ00_007880;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000297.1	Protein Homology	CDS	1	225	.	-	2	ID=cds-CYJ00_RS07875;Parent=gene-CYJ00_RS07875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=CYJ00_RS07875;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000112.1 1 340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000112.1	RefSeq	region	1	340	.	+	.	ID=NZ_PJUS02000112.1:1..340;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000112.1	RefSeq	pseudogene	1	340	.	-	.	ID=gene-CYJ00_RS03220;Name=CYJ00_RS03220;end_range=340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03220;old_locus_tag=CYJ00_003225;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000112.1	Protein Homology	CDS	1	340	.	-	1	ID=cds-CYJ00_RS03220;Parent=gene-CYJ00_RS03220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=CYJ00_RS03220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000081.1 1 267
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000081.1	RefSeq	region	1	267	.	+	.	ID=NZ_PJUS02000081.1:1..267;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000081.1	RefSeq	pseudogene	1	267	.	-	.	ID=gene-CYJ00_RS02220;Name=CYJ00_RS02220;end_range=267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS02220;old_locus_tag=CYJ00_002220;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000081.1	Protein Homology	CDS	1	267	.	-	1	ID=cds-CYJ00_RS02220;Parent=gene-CYJ00_RS02220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=CYJ00_RS02220;partial=true;product=beta-lactam sensor/signal transducer BlaR1;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PJUS02000021.1 1 12213
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000021.1	RefSeq	region	1	12213	.	+	.	ID=NZ_PJUS02000021.1:1..12213;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000021.1	RefSeq	gene	1	296	.	-	.	ID=gene-CYJ00_RS00575;Name=CYJ00_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00575;old_locus_tag=CYJ00_000575;partial=true;start_range=.,1
NZ_PJUS02000021.1	Protein Homology	CDS	1	296	.	-	0	ID=cds-WP_274539968.1;Parent=gene-CYJ00_RS00575;Dbxref=GenBank:WP_274539968.1;Name=WP_274539968.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455113.1;locus_tag=CYJ00_RS00575;partial=true;product=geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase;protein_id=WP_274539968.1;start_range=.,1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	1255	1557	.	-	.	ID=gene-CYJ00_RS00580;Name=CYJ00_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00580;old_locus_tag=CYJ00_000580
NZ_PJUS02000021.1	Protein Homology	CDS	1255	1557	.	-	0	ID=cds-WP_014613451.1;Parent=gene-CYJ00_RS00580;Dbxref=GenBank:WP_014613451.1;Name=WP_014613451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166442.1;locus_tag=CYJ00_RS00580;product=YerC/YecD family TrpR-related protein;protein_id=WP_014613451.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	1625	2920	.	-	.	ID=gene-CYJ00_RS00585;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00585;old_locus_tag=CYJ00_000585
NZ_PJUS02000021.1	Protein Homology	CDS	1625	2920	.	-	0	ID=cds-WP_014613450.1;Parent=gene-CYJ00_RS00585;Dbxref=GenBank:WP_014613450.1;Name=WP_014613450.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275349.1;locus_tag=CYJ00_RS00585;product=adenylosuccinate lyase;protein_id=WP_014613450.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	3343	3531	.	-	.	ID=gene-CYJ00_RS00590;Name=CYJ00_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00590;old_locus_tag=CYJ00_000590
NZ_PJUS02000021.1	Protein Homology	CDS	3343	3531	.	-	0	ID=cds-WP_014613449.1;Parent=gene-CYJ00_RS00590;Dbxref=GenBank:WP_014613449.1;Name=WP_014613449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166440.1;locus_tag=CYJ00_RS00590;product=NETI motif-containing protein;protein_id=WP_014613449.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	3521	4090	.	-	.	ID=gene-CYJ00_RS00595;Name=CYJ00_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00595;old_locus_tag=CYJ00_000595
NZ_PJUS02000021.1	Protein Homology	CDS	3521	4090	.	-	0	ID=cds-WP_014613448.1;Parent=gene-CYJ00_RS00595;Dbxref=GenBank:WP_014613448.1;Name=WP_014613448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=CYJ00_RS00595;product=DUF2179 domain-containing protein;protein_id=WP_014613448.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	4152	4982	.	-	.	ID=gene-CYJ00_RS00600;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CYJ00_RS00600;old_locus_tag=CYJ00_000600
NZ_PJUS02000021.1	Protein Homology	CDS	4152	4982	.	-	0	ID=cds-WP_041613345.1;Parent=gene-CYJ00_RS00600;Dbxref=GenBank:WP_041613345.1;Name=WP_041613345.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169336.1;locus_tag=CYJ00_RS00600;product=NAD(+) synthase;protein_id=WP_041613345.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	4975	6450	.	-	.	ID=gene-CYJ00_RS00605;Name=CYJ00_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00605;old_locus_tag=CYJ00_000605
NZ_PJUS02000021.1	Protein Homology	CDS	4975	6450	.	-	0	ID=cds-WP_014613446.1;Parent=gene-CYJ00_RS00605;Dbxref=GenBank:WP_014613446.1;Name=WP_014613446.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169335.1;locus_tag=CYJ00_RS00605;product=nicotinate phosphoribosyltransferase;protein_id=WP_014613446.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	7081	8151	.	+	.	ID=gene-CYJ00_RS00610;Name=CYJ00_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00610;old_locus_tag=CYJ00_000610
NZ_PJUS02000021.1	Protein Homology	CDS	7081	8151	.	+	0	ID=cds-WP_063278577.1;Parent=gene-CYJ00_RS00610;Dbxref=GenBank:WP_063278577.1;Name=WP_063278577.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=CYJ00_RS00610;product=nitric oxide synthase oxygenase;protein_id=WP_063278577.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	8195	8998	.	+	.	ID=gene-CYJ00_RS00615;Name=CYJ00_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00615;old_locus_tag=CYJ00_000615
NZ_PJUS02000021.1	Protein Homology	CDS	8195	8998	.	+	0	ID=cds-WP_015729399.1;Parent=gene-CYJ00_RS00615;Dbxref=GenBank:WP_015729399.1;Name=WP_015729399.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804670.1;locus_tag=CYJ00_RS00615;product=prephenate dehydratase;protein_id=WP_015729399.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	9051	10157	.	-	.	ID=gene-CYJ00_RS00620;Name=CYJ00_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00620;old_locus_tag=CYJ00_000620
NZ_PJUS02000021.1	Protein Homology	CDS	9051	10157	.	-	0	ID=cds-WP_015729400.1;Parent=gene-CYJ00_RS00620;Dbxref=GenBank:WP_015729400.1;Name=WP_015729400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613443.1;locus_tag=CYJ00_RS00620;product=glycosyl hydrolase family 28-related protein;protein_id=WP_015729400.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	10238	10789	.	+	.	ID=gene-CYJ00_RS00625;Name=CYJ00_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00625;old_locus_tag=CYJ00_000625
NZ_PJUS02000021.1	Protein Homology	CDS	10238	10789	.	+	0	ID=cds-WP_014613442.1;Parent=gene-CYJ00_RS00625;Dbxref=GenBank:WP_014613442.1;Name=WP_014613442.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=CYJ00_RS00625;product=cysteine hydrolase family protein;protein_id=WP_014613442.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	10847	11773	.	+	.	ID=gene-CYJ00_RS00630;Name=CYJ00_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00630;old_locus_tag=CYJ00_000630
NZ_PJUS02000021.1	Protein Homology	CDS	10847	11773	.	+	0	ID=cds-WP_172425815.1;Parent=gene-CYJ00_RS00630;Dbxref=GenBank:WP_172425815.1;Name=WP_172425815.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445415.1;locus_tag=CYJ00_RS00630;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_172425815.1;transl_table=11
NZ_PJUS02000021.1	RefSeq	gene	11803	12084	.	+	.	ID=gene-CYJ00_RS00635;Name=CYJ00_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00635;old_locus_tag=CYJ00_000635
NZ_PJUS02000021.1	Protein Homology	CDS	11803	12084	.	+	0	ID=cds-WP_014613440.1;Parent=gene-CYJ00_RS00635;Dbxref=GenBank:WP_014613440.1;Name=WP_014613440.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166431.1;locus_tag=CYJ00_RS00635;product=GNAT family N-acetyltransferase;protein_id=WP_014613440.1;transl_table=11
##sequence-region NZ_PJUS02000033.1 1 23356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000033.1	RefSeq	region	1	23356	.	+	.	ID=NZ_PJUS02000033.1:1..23356;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000033.1	RefSeq	gene	671	1129	.	-	.	ID=gene-CYJ00_RS00925;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=CYJ00_RS00925;old_locus_tag=CYJ00_000925
NZ_PJUS02000033.1	Protein Homology	CDS	671	1129	.	-	0	ID=cds-WP_014613510.1;Parent=gene-CYJ00_RS00925;Dbxref=GenBank:WP_014613510.1;Name=WP_014613510.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613510.1;locus_tag=CYJ00_RS00925;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_014613510.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	1210	2160	.	-	.	ID=gene-CYJ00_RS00930;Name=CYJ00_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00930;old_locus_tag=CYJ00_000930
NZ_PJUS02000033.1	Protein Homology	CDS	1210	2160	.	-	0	ID=cds-WP_101457535.1;Parent=gene-CYJ00_RS00930;Dbxref=GenBank:WP_101457535.1;Name=WP_101457535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=CYJ00_RS00930;product=phosphoglycerate dehydrogenase;protein_id=WP_101457535.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	2167	2625	.	-	.	ID=gene-CYJ00_RS00935;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CYJ00_RS00935;old_locus_tag=CYJ00_000935
NZ_PJUS02000033.1	Protein Homology	CDS	2167	2625	.	-	0	ID=cds-WP_014613508.1;Parent=gene-CYJ00_RS00935;Dbxref=GenBank:WP_014613508.1;Name=WP_014613508.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=CYJ00_RS00935;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_014613508.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	2708	3994	.	+	.	ID=gene-CYJ00_RS00940;Name=CYJ00_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00940;old_locus_tag=CYJ00_000940
NZ_PJUS02000033.1	Protein Homology	CDS	2708	3994	.	+	0	ID=cds-WP_014613507.1;Parent=gene-CYJ00_RS00940;Dbxref=GenBank:WP_014613507.1;Name=WP_014613507.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169387.1;locus_tag=CYJ00_RS00940;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014613507.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	4088	5182	.	+	.	ID=gene-CYJ00_RS00945;Name=CYJ00_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00945;old_locus_tag=CYJ00_000945
NZ_PJUS02000033.1	Protein Homology	CDS	4088	5182	.	+	0	ID=cds-WP_014613506.1;Parent=gene-CYJ00_RS00945;Dbxref=GenBank:WP_014613506.1;Name=WP_014613506.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=CYJ00_RS00945;product=FUSC family protein;protein_id=WP_014613506.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	5330	6907	.	-	.	ID=gene-CYJ00_RS00950;Name=CYJ00_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00950;old_locus_tag=CYJ00_000950
NZ_PJUS02000033.1	Protein Homology	CDS	5330	6907	.	-	0	ID=cds-WP_101457648.1;Parent=gene-CYJ00_RS00950;Dbxref=GenBank:WP_101457648.1;Name=WP_101457648.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613505.1;locus_tag=CYJ00_RS00950;product=FMN-binding glutamate synthase family protein;protein_id=WP_101457648.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	7433	9169	.	-	.	ID=gene-CYJ00_RS00955;Name=CYJ00_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00955;old_locus_tag=CYJ00_000955
NZ_PJUS02000033.1	Protein Homology	CDS	7433	9169	.	-	0	ID=cds-WP_014613503.1;Parent=gene-CYJ00_RS00955;Dbxref=GenBank:WP_014613503.1;Name=WP_014613503.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=CYJ00_RS00955;product=ABC transporter ATP-binding protein;protein_id=WP_014613503.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	9990	11120	.	-	.	ID=gene-CYJ00_RS00960;Name=CYJ00_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00960;old_locus_tag=CYJ00_000960
NZ_PJUS02000033.1	Protein Homology	CDS	9990	11120	.	-	0	ID=cds-WP_037542271.1;Parent=gene-CYJ00_RS00960;Dbxref=GenBank:WP_037542271.1;Name=WP_037542271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612982.1;locus_tag=CYJ00_RS00960;product=sugar diacid recognition domain-containing protein;protein_id=WP_037542271.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	11898	12887	.	-	.	ID=gene-CYJ00_RS00965;Name=CYJ00_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00965;old_locus_tag=CYJ00_000965
NZ_PJUS02000033.1	Protein Homology	CDS	11898	12887	.	-	0	ID=cds-WP_065354013.1;Parent=gene-CYJ00_RS00965;Dbxref=GenBank:WP_065354013.1;Name=WP_065354013.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167214.1;locus_tag=CYJ00_RS00965;product=YeiH family protein;protein_id=WP_065354013.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	13121	14767	.	+	.	ID=gene-CYJ00_RS00970;Name=CYJ00_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00970;old_locus_tag=CYJ00_000970
NZ_PJUS02000033.1	Protein Homology	CDS	13121	14767	.	+	0	ID=cds-WP_101457649.1;Parent=gene-CYJ00_RS00970;Dbxref=GenBank:WP_101457649.1;Name=WP_101457649.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166658.1;locus_tag=CYJ00_RS00970;product=alpha-keto acid decarboxylase family protein;protein_id=WP_101457649.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	15852	17255	.	+	.	ID=gene-CYJ00_RS00975;Name=CYJ00_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00975;old_locus_tag=CYJ00_000975
NZ_PJUS02000033.1	Protein Homology	CDS	15852	17255	.	+	0	ID=cds-WP_014612985.1;Parent=gene-CYJ00_RS00975;Dbxref=GenBank:WP_014612985.1;Name=WP_014612985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=CYJ00_RS00975;product=anthranilate synthase component I;protein_id=WP_014612985.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	17252	17836	.	+	.	ID=gene-CYJ00_RS00980;Name=CYJ00_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00980;old_locus_tag=CYJ00_000980
NZ_PJUS02000033.1	Protein Homology	CDS	17252	17836	.	+	0	ID=cds-WP_037542279.1;Parent=gene-CYJ00_RS00980;Dbxref=GenBank:WP_037542279.1;Name=WP_037542279.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=CYJ00_RS00980;product=anthranilate synthase component II;protein_id=WP_037542279.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	17820	18824	.	+	.	ID=gene-CYJ00_RS00985;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00985;old_locus_tag=CYJ00_000985
NZ_PJUS02000033.1	Protein Homology	CDS	17820	18824	.	+	0	ID=cds-WP_020219474.1;Parent=gene-CYJ00_RS00985;Dbxref=GenBank:WP_020219474.1;Name=WP_020219474.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612987.1;locus_tag=CYJ00_RS00985;product=anthranilate phosphoribosyltransferase;protein_id=WP_020219474.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	18821	19600	.	+	.	ID=gene-CYJ00_RS00990;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00990;old_locus_tag=CYJ00_000990
NZ_PJUS02000033.1	Protein Homology	CDS	18821	19600	.	+	0	ID=cds-WP_101457650.1;Parent=gene-CYJ00_RS00990;Dbxref=GenBank:WP_101457650.1;Name=WP_101457650.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612988.1;locus_tag=CYJ00_RS00990;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_101457650.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	19602	20225	.	+	.	ID=gene-CYJ00_RS00995;Name=CYJ00_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00995;old_locus_tag=CYJ00_000995
NZ_PJUS02000033.1	Protein Homology	CDS	19602	20225	.	+	0	ID=cds-WP_101457651.1;Parent=gene-CYJ00_RS00995;Dbxref=GenBank:WP_101457651.1;Name=WP_101457651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=CYJ00_RS00995;product=phosphoribosylanthranilate isomerase;protein_id=WP_101457651.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	20228	21433	.	+	.	ID=gene-CYJ00_RS01000;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS01000;old_locus_tag=CYJ00_001000
NZ_PJUS02000033.1	Protein Homology	CDS	20228	21433	.	+	0	ID=cds-WP_015729625.1;Parent=gene-CYJ00_RS01000;Dbxref=GenBank:WP_015729625.1;Name=WP_015729625.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219476.1;locus_tag=CYJ00_RS01000;product=tryptophan synthase subunit beta;protein_id=WP_015729625.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	21436	22185	.	+	.	ID=gene-CYJ00_RS01005;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01005;old_locus_tag=CYJ00_001005
NZ_PJUS02000033.1	Protein Homology	CDS	21436	22185	.	+	0	ID=cds-WP_101457652.1;Parent=gene-CYJ00_RS01005;Dbxref=GenBank:WP_101457652.1;Name=WP_101457652.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729624.1;locus_tag=CYJ00_RS01005;product=tryptophan synthase subunit alpha;protein_id=WP_101457652.1;transl_table=11
NZ_PJUS02000033.1	RefSeq	gene	22305	23015	.	+	.	ID=gene-CYJ00_RS01010;Name=CYJ00_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01010;old_locus_tag=CYJ00_001010
NZ_PJUS02000033.1	Protein Homology	CDS	22305	23015	.	+	0	ID=cds-WP_101457653.1;Parent=gene-CYJ00_RS01010;Dbxref=GenBank:WP_101457653.1;Name=WP_101457653.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=CYJ00_RS01010;product=HAD family hydrolase;protein_id=WP_101457653.1;transl_table=11
##sequence-region NZ_PJUS02000261.1 1 2271
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000261.1	RefSeq	region	1	2271	.	+	.	ID=NZ_PJUS02000261.1:1..2271;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000261.1	RefSeq	gene	1	1753	.	-	.	ID=gene-CYJ00_RS07095;Name=CYJ00_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07095;old_locus_tag=CYJ00_007100;partial=true;start_range=.,1
NZ_PJUS02000261.1	GeneMarkS-2+	CDS	1	1753	.	-	0	ID=cds-WP_198597688.1;Parent=gene-CYJ00_RS07095;Dbxref=GenBank:WP_198597688.1;Name=WP_198597688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS07095;partial=true;product=hypothetical protein;protein_id=WP_198597688.1;start_range=.,1;transl_table=11
NZ_PJUS02000261.1	RefSeq	pseudogene	1770	2222	.	-	.	ID=gene-CYJ00_RS13935;Name=CYJ00_RS13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13935;partial=true;pseudo=true;start_range=.,1770
NZ_PJUS02000261.1	Protein Homology	CDS	1770	2222	.	-	0	ID=cds-CYJ00_RS13935;Parent=gene-CYJ00_RS13935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ00_RS13935;partial=true;product=YPDG domain-containing protein;pseudo=true;start_range=.,1770;transl_table=11
##sequence-region NZ_PJUS02000373.1 1 14334
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000373.1	RefSeq	region	1	14334	.	+	.	ID=NZ_PJUS02000373.1:1..14334;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000373.1	RefSeq	gene	434	1450	.	-	.	ID=gene-CYJ00_RS11120;Name=CYJ00_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11120;old_locus_tag=CYJ00_011125
NZ_PJUS02000373.1	Protein Homology	CDS	434	1450	.	-	0	ID=cds-WP_101457779.1;Parent=gene-CYJ00_RS11120;Dbxref=GenBank:WP_101457779.1;Name=WP_101457779.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219747.1;locus_tag=CYJ00_RS11120;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_101457779.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	1659	2804	.	+	.	ID=gene-CYJ00_RS11125;Name=CYJ00_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11125;old_locus_tag=CYJ00_011130
NZ_PJUS02000373.1	Protein Homology	CDS	1659	2804	.	+	0	ID=cds-WP_014613738.1;Parent=gene-CYJ00_RS11125;Dbxref=GenBank:WP_014613738.1;Name=WP_014613738.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613738.1;locus_tag=CYJ00_RS11125;product=cysteine desulfurase family protein;protein_id=WP_014613738.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	2804	3916	.	+	.	ID=gene-CYJ00_RS11130;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=CYJ00_RS11130;old_locus_tag=CYJ00_011135
NZ_PJUS02000373.1	Protein Homology	CDS	2804	3916	.	+	0	ID=cds-WP_014613739.1;Parent=gene-CYJ00_RS11130;Dbxref=GenBank:WP_014613739.1;Name=WP_014613739.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469417.1;locus_tag=CYJ00_RS11130;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_014613739.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	3932	4606	.	+	.	ID=gene-CYJ00_RS11135;Name=CYJ00_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11135;old_locus_tag=CYJ00_011140
NZ_PJUS02000373.1	Protein Homology	CDS	3932	4606	.	+	0	ID=cds-WP_020219749.1;Parent=gene-CYJ00_RS11135;Dbxref=GenBank:WP_020219749.1;Name=WP_020219749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=CYJ00_RS11135;product=tetratricopeptide repeat protein;protein_id=WP_020219749.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	4609	7008	.	+	.	ID=gene-CYJ00_RS11140;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=CYJ00_RS11140;old_locus_tag=CYJ00_011145
NZ_PJUS02000373.1	Protein Homology	CDS	4609	7008	.	+	0	ID=cds-WP_100006541.1;Parent=gene-CYJ00_RS11140;Dbxref=GenBank:WP_100006541.1;Name=WP_100006541.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169706.1;locus_tag=CYJ00_RS11140;product=SF1B family DNA helicase RecD2;protein_id=WP_100006541.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	7254	9884	.	+	.	ID=gene-CYJ00_RS11145;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CYJ00_RS11145;old_locus_tag=CYJ00_011150
NZ_PJUS02000373.1	Protein Homology	CDS	7254	9884	.	+	0	ID=cds-WP_065520479.1;Parent=gene-CYJ00_RS11145;Dbxref=GenBank:WP_065520479.1;Name=WP_065520479.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512470.1;locus_tag=CYJ00_RS11145;product=alanine--tRNA ligase;protein_id=WP_065520479.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	9947	10219	.	+	.	ID=gene-CYJ00_RS11150;Name=CYJ00_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11150;old_locus_tag=CYJ00_011155
NZ_PJUS02000373.1	Protein Homology	CDS	9947	10219	.	+	0	ID=cds-WP_014613743.1;Parent=gene-CYJ00_RS11150;Dbxref=GenBank:WP_014613743.1;Name=WP_014613743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=CYJ00_RS11150;product=IreB family regulatory phosphoprotein;protein_id=WP_014613743.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	10212	10640	.	+	.	ID=gene-CYJ00_RS11155;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CYJ00_RS11155;old_locus_tag=CYJ00_011160
NZ_PJUS02000373.1	Protein Homology	CDS	10212	10640	.	+	0	ID=cds-WP_014613744.1;Parent=gene-CYJ00_RS11155;Dbxref=GenBank:WP_014613744.1;Name=WP_014613744.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=CYJ00_RS11155;product=Holliday junction resolvase RuvX;protein_id=WP_014613744.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	10654	10974	.	+	.	ID=gene-CYJ00_RS11160;Name=CYJ00_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11160;old_locus_tag=CYJ00_011165
NZ_PJUS02000373.1	Protein Homology	CDS	10654	10974	.	+	0	ID=cds-WP_014613745.1;Parent=gene-CYJ00_RS11160;Dbxref=GenBank:WP_014613745.1;Name=WP_014613745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=CYJ00_RS11160;product=DUF1292 domain-containing protein;protein_id=WP_014613745.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	11371	12015	.	+	.	ID=gene-CYJ00_RS11165;Name=CYJ00_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11165;old_locus_tag=CYJ00_011170
NZ_PJUS02000373.1	Protein Homology	CDS	11371	12015	.	+	0	ID=cds-WP_014613747.1;Parent=gene-CYJ00_RS11165;Dbxref=GenBank:WP_014613747.1;Name=WP_014613747.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=CYJ00_RS11165;product=O-methyltransferase;protein_id=WP_014613747.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	12008	12937	.	+	.	ID=gene-CYJ00_RS11170;Name=CYJ00_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11170;old_locus_tag=CYJ00_011175
NZ_PJUS02000373.1	Protein Homology	CDS	12008	12937	.	+	0	ID=cds-WP_014613748.1;Parent=gene-CYJ00_RS11170;Dbxref=GenBank:WP_014613748.1;Name=WP_014613748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CYJ00_RS11170;product=peptidase U32 family protein;protein_id=WP_014613748.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	gene	12956	14221	.	+	.	ID=gene-CYJ00_RS11175;Name=CYJ00_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11175;old_locus_tag=CYJ00_011180
NZ_PJUS02000373.1	Protein Homology	CDS	12956	14221	.	+	0	ID=cds-WP_014613749.1;Parent=gene-CYJ00_RS11175;Dbxref=GenBank:WP_014613749.1;Name=WP_014613749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169713.1;locus_tag=CYJ00_RS11175;product=peptidase U32 family protein;protein_id=WP_014613749.1;transl_table=11
NZ_PJUS02000373.1	RefSeq	pseudogene	14225	14334	.	+	.	ID=gene-CYJ00_RS11180;Name=CYJ00_RS11180;end_range=14334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11180;old_locus_tag=CYJ00_011185;partial=true;pseudo=true
NZ_PJUS02000373.1	Protein Homology	CDS	14225	14334	.	+	0	ID=cds-CYJ00_RS11180;Parent=gene-CYJ00_RS11180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613750.1;locus_tag=CYJ00_RS11180;partial=true;product=uridine kinase;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000124.1 1 11126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000124.1	RefSeq	region	1	11126	.	+	.	ID=NZ_PJUS02000124.1:1..11126;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000124.1	RefSeq	pseudogene	1	232	.	+	.	ID=gene-CYJ00_RS03500;Name=CYJ00_RS03500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03500;old_locus_tag=CYJ00_003505;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000124.1	Protein Homology	CDS	1	232	.	+	1	ID=cds-CYJ00_RS03500;Parent=gene-CYJ00_RS03500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=CYJ00_RS03500;partial=true;product=diacylglycerol/lipid kinase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	318	854	.	-	.	ID=gene-CYJ00_RS03505;Name=CYJ00_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03505;old_locus_tag=CYJ00_003510
NZ_PJUS02000124.1	Protein Homology	CDS	318	854	.	-	0	ID=cds-WP_101457780.1;Parent=gene-CYJ00_RS03505;Dbxref=GenBank:WP_101457780.1;Name=WP_101457780.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168530.1;locus_tag=CYJ00_RS03505;product=5' nucleotidase%2C NT5C type;protein_id=WP_101457780.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	955	2004	.	-	.	ID=gene-CYJ00_RS03510;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03510;old_locus_tag=CYJ00_003515
NZ_PJUS02000124.1	Protein Homology	CDS	955	2004	.	-	0	ID=cds-WP_101457781.1;Parent=gene-CYJ00_RS03510;Dbxref=GenBank:WP_101457781.1;Name=WP_101457781.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=CYJ00_RS03510;product=histidinol-phosphate transaminase;protein_id=WP_101457781.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	2329	3846	.	-	.	ID=gene-CYJ00_RS03515;Name=CYJ00_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03515;old_locus_tag=CYJ00_003520
NZ_PJUS02000124.1	Protein Homology	CDS	2329	3846	.	-	0	ID=cds-WP_101457782.1;Parent=gene-CYJ00_RS03515;Dbxref=GenBank:WP_101457782.1;Name=WP_101457782.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614537.1;locus_tag=CYJ00_RS03515;product=ABC transporter permease/substrate-binding protein;protein_id=WP_101457782.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	3843	4802	.	-	.	ID=gene-CYJ00_RS03520;Name=CYJ00_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03520;old_locus_tag=CYJ00_003525
NZ_PJUS02000124.1	Protein Homology	CDS	3843	4802	.	-	0	ID=cds-WP_014614538.1;Parent=gene-CYJ00_RS03520;Dbxref=GenBank:WP_014614538.1;Name=WP_014614538.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219830.1;locus_tag=CYJ00_RS03520;product=ABC transporter ATP-binding protein;protein_id=WP_014614538.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	5041	6822	.	-	.	ID=gene-CYJ00_RS03525;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS03525;old_locus_tag=CYJ00_003530
NZ_PJUS02000124.1	Protein Homology	CDS	5041	6822	.	-	0	ID=cds-WP_015728744.1;Parent=gene-CYJ00_RS03525;Dbxref=GenBank:WP_015728744.1;Name=WP_015728744.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=CYJ00_RS03525;product=DNA helicase RecQ;protein_id=WP_015728744.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	6832	8709	.	-	.	ID=gene-CYJ00_RS03530;Name=CYJ00_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03530;old_locus_tag=CYJ00_003535
NZ_PJUS02000124.1	Protein Homology	CDS	6832	8709	.	-	0	ID=cds-WP_100006802.1;Parent=gene-CYJ00_RS03530;Dbxref=GenBank:WP_100006802.1;Name=WP_100006802.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=CYJ00_RS03530;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_100006802.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	8821	9636	.	+	.	ID=gene-CYJ00_RS03535;Name=CYJ00_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03535;old_locus_tag=CYJ00_003540
NZ_PJUS02000124.1	Protein Homology	CDS	8821	9636	.	+	0	ID=cds-WP_015728742.1;Parent=gene-CYJ00_RS03535;Dbxref=GenBank:WP_015728742.1;Name=WP_015728742.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168536.1;locus_tag=CYJ00_RS03535;product=ZIP family metal transporter;protein_id=WP_015728742.1;transl_table=11
NZ_PJUS02000124.1	RefSeq	gene	9793	11126	.	-	.	ID=gene-CYJ00_RS03540;Name=CYJ00_RS03540;end_range=11126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03540;old_locus_tag=CYJ00_003545;partial=true
NZ_PJUS02000124.1	Protein Homology	CDS	9793	11126	.	-	2	ID=cds-WP_241956936.1;Parent=gene-CYJ00_RS03540;Dbxref=GenBank:WP_241956936.1;Name=WP_241956936.1;Ontology_term=GO:0005524;end_range=11126,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728741.1;locus_tag=CYJ00_RS03540;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_241956936.1;transl_table=11
##sequence-region NZ_PJUS02000248.1 1 9879
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000248.1	RefSeq	region	1	9879	.	+	.	ID=NZ_PJUS02000248.1:1..9879;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000248.1	RefSeq	gene	790	2745	.	-	.	ID=gene-CYJ00_RS06805;Name=CYJ00_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06805;old_locus_tag=CYJ00_006810
NZ_PJUS02000248.1	Protein Homology	CDS	790	2745	.	-	0	ID=cds-WP_037542294.1;Parent=gene-CYJ00_RS06805;Dbxref=GenBank:WP_037542294.1;Name=WP_037542294.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499540.1;locus_tag=CYJ00_RS06805;product=fructose-bisphosphatase class III;protein_id=WP_037542294.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	3261	4442	.	+	.	ID=gene-CYJ00_RS06810;Name=CYJ00_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06810;old_locus_tag=CYJ00_006815
NZ_PJUS02000248.1	Protein Homology	CDS	3261	4442	.	+	0	ID=cds-WP_101457783.1;Parent=gene-CYJ00_RS06810;Dbxref=GenBank:WP_101457783.1;Name=WP_101457783.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166503.1;locus_tag=CYJ00_RS06810;product=MFS transporter;protein_id=WP_101457783.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	4683	5948	.	+	.	ID=gene-CYJ00_RS06815;Name=CYJ00_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06815;old_locus_tag=CYJ00_006820
NZ_PJUS02000248.1	Protein Homology	CDS	4683	5948	.	+	0	ID=cds-WP_014613004.1;Parent=gene-CYJ00_RS06815;Dbxref=GenBank:WP_014613004.1;Name=WP_014613004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613004.1;locus_tag=CYJ00_RS06815;product=pyruvate MFS transporter;protein_id=WP_014613004.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	6334	6930	.	+	.	ID=gene-CYJ00_RS06820;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06820;old_locus_tag=CYJ00_006825
NZ_PJUS02000248.1	Protein Homology	CDS	6334	6930	.	+	0	ID=cds-WP_065520356.1;Parent=gene-CYJ00_RS06820;Dbxref=GenBank:WP_065520356.1;Name=WP_065520356.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219480.1;locus_tag=CYJ00_RS06820;product=class A sortase SrtA;protein_id=WP_065520356.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	7101	8246	.	+	.	ID=gene-CYJ00_RS06825;Name=CYJ00_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06825;old_locus_tag=CYJ00_006830
NZ_PJUS02000248.1	Protein Homology	CDS	7101	8246	.	+	0	ID=cds-WP_101457784.1;Parent=gene-CYJ00_RS06825;Dbxref=GenBank:WP_101457784.1;Name=WP_101457784.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169529.1;locus_tag=CYJ00_RS06825;product=glycerate kinase family protein;protein_id=WP_101457784.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	8251	8784	.	+	.	ID=gene-CYJ00_RS06830;Name=CYJ00_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06830;old_locus_tag=CYJ00_006835
NZ_PJUS02000248.1	Protein Homology	CDS	8251	8784	.	+	0	ID=cds-WP_014613007.1;Parent=gene-CYJ00_RS06830;Dbxref=GenBank:WP_014613007.1;Name=WP_014613007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166507.1;locus_tag=CYJ00_RS06830;product=LURP-one-related family protein;protein_id=WP_014613007.1;transl_table=11
NZ_PJUS02000248.1	RefSeq	gene	8856	9530	.	-	.	ID=gene-CYJ00_RS06835;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06835;old_locus_tag=CYJ00_006840
NZ_PJUS02000248.1	Protein Homology	CDS	8856	9530	.	-	0	ID=cds-WP_014613008.1;Parent=gene-CYJ00_RS06835;Dbxref=GenBank:WP_014613008.1;Name=WP_014613008.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166508.1;locus_tag=CYJ00_RS06835;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_014613008.1;transl_table=11
##sequence-region NZ_PJUS02000355.1 1 11739
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000355.1	RefSeq	region	1	11739	.	+	.	ID=NZ_PJUS02000355.1:1..11739;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000355.1	RefSeq	gene	89	442	.	-	.	ID=gene-CYJ00_RS10735;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CYJ00_RS10735;old_locus_tag=CYJ00_010740
NZ_PJUS02000355.1	Protein Homology	CDS	89	442	.	-	0	ID=cds-WP_014613217.1;Parent=gene-CYJ00_RS10735;Dbxref=GenBank:WP_014613217.1;Name=WP_014613217.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CYJ00_RS10735;product=50S ribosomal protein L22;protein_id=WP_014613217.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	476	754	.	-	.	ID=gene-CYJ00_RS10740;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CYJ00_RS10740;old_locus_tag=CYJ00_010745
NZ_PJUS02000355.1	Protein Homology	CDS	476	754	.	-	0	ID=cds-WP_014613216.1;Parent=gene-CYJ00_RS10740;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=CYJ00_RS10740;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	819	1652	.	-	.	ID=gene-CYJ00_RS10745;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CYJ00_RS10745;old_locus_tag=CYJ00_010750
NZ_PJUS02000355.1	Protein Homology	CDS	819	1652	.	-	0	ID=cds-WP_014613215.1;Parent=gene-CYJ00_RS10745;Dbxref=GenBank:WP_014613215.1;Name=WP_014613215.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=CYJ00_RS10745;product=50S ribosomal protein L2;protein_id=WP_014613215.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	1684	1959	.	-	.	ID=gene-CYJ00_RS10750;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CYJ00_RS10750;old_locus_tag=CYJ00_010755
NZ_PJUS02000355.1	Protein Homology	CDS	1684	1959	.	-	0	ID=cds-WP_014613214.1;Parent=gene-CYJ00_RS10750;Dbxref=GenBank:WP_014613214.1;Name=WP_014613214.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CYJ00_RS10750;product=50S ribosomal protein L23;protein_id=WP_014613214.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	1959	2582	.	-	.	ID=gene-CYJ00_RS10755;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CYJ00_RS10755;old_locus_tag=CYJ00_010760
NZ_PJUS02000355.1	Protein Homology	CDS	1959	2582	.	-	0	ID=cds-WP_014613213.1;Parent=gene-CYJ00_RS10755;Dbxref=GenBank:WP_014613213.1;Name=WP_014613213.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=CYJ00_RS10755;product=50S ribosomal protein L4;protein_id=WP_014613213.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	2609	3268	.	-	.	ID=gene-CYJ00_RS10760;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CYJ00_RS10760;old_locus_tag=CYJ00_010765
NZ_PJUS02000355.1	Protein Homology	CDS	2609	3268	.	-	0	ID=cds-WP_014613212.1;Parent=gene-CYJ00_RS10760;Dbxref=GenBank:WP_014613212.1;Name=WP_014613212.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=CYJ00_RS10760;product=50S ribosomal protein L3;protein_id=WP_014613212.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	3296	3604	.	-	.	ID=gene-CYJ00_RS10765;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CYJ00_RS10765;old_locus_tag=CYJ00_010770
NZ_PJUS02000355.1	Protein Homology	CDS	3296	3604	.	-	0	ID=cds-WP_014613211.1;Parent=gene-CYJ00_RS10765;Dbxref=GenBank:WP_014613211.1;Name=WP_014613211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CYJ00_RS10765;product=30S ribosomal protein S10;protein_id=WP_014613211.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	4067	4453	.	+	.	ID=gene-CYJ00_RS10770;Name=CYJ00_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10770;old_locus_tag=CYJ00_010775
NZ_PJUS02000355.1	Protein Homology	CDS	4067	4453	.	+	0	ID=cds-WP_014613210.1;Parent=gene-CYJ00_RS10770;Dbxref=GenBank:WP_014613210.1;Name=WP_014613210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729513.1;locus_tag=CYJ00_RS10770;product=hypothetical protein;protein_id=WP_014613210.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	pseudogene	5111	5400	.	-	.	ID=gene-CYJ00_RS13770;Name=CYJ00_RS13770;end_range=5400,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13770;partial=true;pseudo=true;start_range=.,5111
NZ_PJUS02000355.1	Protein Homology	CDS	5111	5400	.	-	0	ID=cds-CYJ00_RS13770;Parent=gene-CYJ00_RS13770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS13770;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,5111;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	5387	5572	.	-	.	ID=gene-CYJ00_RS13775;Name=CYJ00_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13775
NZ_PJUS02000355.1	GeneMarkS-2+	CDS	5387	5572	.	-	0	ID=cds-WP_226957582.1;Parent=gene-CYJ00_RS13775;Dbxref=GenBank:WP_226957582.1;Name=WP_226957582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13775;product=hypothetical protein;protein_id=WP_226957582.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	5794	7128	.	-	.	ID=gene-CYJ00_RS10780;Name=CYJ00_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10780;old_locus_tag=CYJ00_010785
NZ_PJUS02000355.1	Protein Homology	CDS	5794	7128	.	-	0	ID=cds-WP_014613209.1;Parent=gene-CYJ00_RS10780;Dbxref=GenBank:WP_014613209.1;Name=WP_014613209.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=CYJ00_RS10780;product=NCS2 family permease;protein_id=WP_014613209.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	7249	9384	.	-	.	ID=gene-CYJ00_RS10785;Name=CYJ00_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10785;old_locus_tag=CYJ00_010790
NZ_PJUS02000355.1	Protein Homology	CDS	7249	9384	.	-	0	ID=cds-WP_101457785.1;Parent=gene-CYJ00_RS10785;Dbxref=GenBank:WP_101457785.1;Name=WP_101457785.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729516.1;locus_tag=CYJ00_RS10785;product=DNA topoisomerase III;protein_id=WP_101457785.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	9525	10385	.	+	.	ID=gene-CYJ00_RS10790;Name=CYJ00_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10790;old_locus_tag=CYJ00_010795
NZ_PJUS02000355.1	Protein Homology	CDS	9525	10385	.	+	0	ID=cds-WP_014613207.1;Parent=gene-CYJ00_RS10790;Dbxref=GenBank:WP_014613207.1;Name=WP_014613207.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=CYJ00_RS10790;product=GNAT family N-acetyltransferase;protein_id=WP_014613207.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	10467	11375	.	-	.	ID=gene-CYJ00_RS10795;Name=CYJ00_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10795;old_locus_tag=CYJ00_010800
NZ_PJUS02000355.1	Protein Homology	CDS	10467	11375	.	-	0	ID=cds-WP_014613206.1;Parent=gene-CYJ00_RS10795;Dbxref=GenBank:WP_014613206.1;Name=WP_014613206.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613206.1;locus_tag=CYJ00_RS10795;product=AEC family transporter;protein_id=WP_014613206.1;transl_table=11
NZ_PJUS02000355.1	RefSeq	gene	11482	11652	.	+	.	ID=gene-CYJ00_RS13360;Name=CYJ00_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13360
NZ_PJUS02000355.1	Protein Homology	CDS	11482	11652	.	+	0	ID=cds-WP_014613205.1;Parent=gene-CYJ00_RS13360;Dbxref=GenBank:WP_014613205.1;Name=WP_014613205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613205.1;locus_tag=CYJ00_RS13360;product=SE1832 family protein;protein_id=WP_014613205.1;transl_table=11
##sequence-region NZ_PJUS02000031.1 1 9992
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000031.1	RefSeq	region	1	9992	.	+	.	ID=NZ_PJUS02000031.1:1..9992;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000031.1	RefSeq	gene	60	431	.	+	.	ID=gene-CYJ00_RS00865;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00865;old_locus_tag=CYJ00_000865
NZ_PJUS02000031.1	Protein Homology	CDS	60	431	.	+	0	ID=cds-WP_014614657.1;Parent=gene-CYJ00_RS00865;Dbxref=GenBank:WP_014614657.1;Name=WP_014614657.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=CYJ00_RS00865;product=global transcriptional regulator SarA;protein_id=WP_014614657.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	642	1358	.	-	.	ID=gene-CYJ00_RS00870;Name=CYJ00_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00870;old_locus_tag=CYJ00_000870
NZ_PJUS02000031.1	Protein Homology	CDS	642	1358	.	-	0	ID=cds-WP_014614658.1;Parent=gene-CYJ00_RS00870;Dbxref=GenBank:WP_014614658.1;Name=WP_014614658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614658.1;locus_tag=CYJ00_RS00870;product=hypothetical protein;protein_id=WP_014614658.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	1447	1950	.	-	.	ID=gene-CYJ00_RS00875;Name=CYJ00_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00875;old_locus_tag=CYJ00_000875
NZ_PJUS02000031.1	Protein Homology	CDS	1447	1950	.	-	0	ID=cds-WP_014614659.1;Parent=gene-CYJ00_RS00875;Dbxref=GenBank:WP_014614659.1;Name=WP_014614659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167340.1;locus_tag=CYJ00_RS00875;product=SA0570 family protein;protein_id=WP_014614659.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	2042	2842	.	-	.	ID=gene-CYJ00_RS00880;Name=CYJ00_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00880;old_locus_tag=CYJ00_000880
NZ_PJUS02000031.1	Protein Homology	CDS	2042	2842	.	-	0	ID=cds-WP_101457786.1;Parent=gene-CYJ00_RS00880;Dbxref=GenBank:WP_101457786.1;Name=WP_101457786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728680.1;locus_tag=CYJ00_RS00880;product=alpha/beta fold hydrolase;protein_id=WP_101457786.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	2842	3546	.	-	.	ID=gene-CYJ00_RS00885;Name=CYJ00_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00885;old_locus_tag=CYJ00_000885
NZ_PJUS02000031.1	Protein Homology	CDS	2842	3546	.	-	0	ID=cds-WP_014614661.1;Parent=gene-CYJ00_RS00885;Dbxref=GenBank:WP_014614661.1;Name=WP_014614661.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=CYJ00_RS00885;product=HAD family hydrolase;protein_id=WP_014614661.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	3603	4496	.	-	.	ID=gene-CYJ00_RS00890;Name=CYJ00_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00890;old_locus_tag=CYJ00_000890
NZ_PJUS02000031.1	Protein Homology	CDS	3603	4496	.	-	0	ID=cds-WP_241956924.1;Parent=gene-CYJ00_RS00890;Dbxref=GenBank:WP_241956924.1;Name=WP_241956924.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=CYJ00_RS00890;product=FecCD family ABC transporter permease;protein_id=WP_241956924.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	4543	5424	.	-	.	ID=gene-CYJ00_RS00895;Name=CYJ00_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00895;old_locus_tag=CYJ00_000895
NZ_PJUS02000031.1	Protein Homology	CDS	4543	5424	.	-	0	ID=cds-WP_101431247.1;Parent=gene-CYJ00_RS00895;Dbxref=GenBank:WP_101431247.1;Name=WP_101431247.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=CYJ00_RS00895;product=ABC transporter substrate-binding protein;protein_id=WP_101431247.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	5946	6800	.	+	.	ID=gene-CYJ00_RS00900;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;gene_synonym=efeM,ywbM;locus_tag=CYJ00_RS00900;old_locus_tag=CYJ00_000900
NZ_PJUS02000031.1	Protein Homology	CDS	5946	6800	.	+	0	ID=cds-WP_101457788.1;Parent=gene-CYJ00_RS00900;Dbxref=GenBank:WP_101457788.1;Name=WP_101457788.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737198.1;locus_tag=CYJ00_RS00900;product=iron uptake system protein EfeO;protein_id=WP_101457788.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	6797	8023	.	+	.	ID=gene-CYJ00_RS00905;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00905;old_locus_tag=CYJ00_000905
NZ_PJUS02000031.1	Protein Homology	CDS	6797	8023	.	+	0	ID=cds-WP_101457532.1;Parent=gene-CYJ00_RS00905;Dbxref=GenBank:WP_101457532.1;Name=WP_101457532.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166265.1;locus_tag=CYJ00_RS00905;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_101457532.1;transl_table=11
NZ_PJUS02000031.1	RefSeq	gene	8004	9716	.	+	.	ID=gene-CYJ00_RS00910;Name=CYJ00_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00910;old_locus_tag=CYJ00_000910
NZ_PJUS02000031.1	Protein Homology	CDS	8004	9716	.	+	0	ID=cds-WP_101457533.1;Parent=gene-CYJ00_RS00910;Dbxref=GenBank:WP_101457533.1;Name=WP_101457533.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166266.1;locus_tag=CYJ00_RS00910;product=FTR1 family protein;protein_id=WP_101457533.1;transl_table=11
##sequence-region NZ_PJUS02000144.1 1 8653
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000144.1	RefSeq	region	1	8653	.	+	.	ID=NZ_PJUS02000144.1:1..8653;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000144.1	RefSeq	pseudogene	1	1301	.	-	.	ID=gene-CYJ00_RS03940;Name=CYJ00_RS03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03940;old_locus_tag=CYJ00_003945;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000144.1	Protein Homology	CDS	1	1301	.	-	0	ID=cds-CYJ00_RS03940;Parent=gene-CYJ00_RS03940;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614802.1;locus_tag=CYJ00_RS03940;partial=true;product=transcription-repair coupling factor;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	1298	1870	.	-	.	ID=gene-CYJ00_RS03945;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CYJ00_RS03945;old_locus_tag=CYJ00_003950
NZ_PJUS02000144.1	Protein Homology	CDS	1298	1870	.	-	0	ID=cds-WP_014614803.1;Parent=gene-CYJ00_RS03945;Dbxref=GenBank:WP_014614803.1;Name=WP_014614803.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426510.1;locus_tag=CYJ00_RS03945;product=aminoacyl-tRNA hydrolase;protein_id=WP_014614803.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	2330	2980	.	-	.	ID=gene-CYJ00_RS03950;Name=CYJ00_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03950;old_locus_tag=CYJ00_003955
NZ_PJUS02000144.1	Protein Homology	CDS	2330	2980	.	-	0	ID=cds-WP_014614804.1;Parent=gene-CYJ00_RS03950;Dbxref=GenBank:WP_014614804.1;Name=WP_014614804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614804.1;locus_tag=CYJ00_RS03950;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_014614804.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	3118	4083	.	-	.	ID=gene-CYJ00_RS03955;Name=CYJ00_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03955;old_locus_tag=CYJ00_003960
NZ_PJUS02000144.1	Protein Homology	CDS	3118	4083	.	-	0	ID=cds-WP_014614805.1;Parent=gene-CYJ00_RS03955;Dbxref=GenBank:WP_014614805.1;Name=WP_014614805.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CYJ00_RS03955;product=ribose-phosphate diphosphokinase;protein_id=WP_014614805.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	4159	5523	.	-	.	ID=gene-CYJ00_RS03960;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CYJ00_RS03960;old_locus_tag=CYJ00_003965
NZ_PJUS02000144.1	Protein Homology	CDS	4159	5523	.	-	0	ID=cds-WP_015728592.1;Parent=gene-CYJ00_RS03960;Dbxref=GenBank:WP_015728592.1;Name=WP_015728592.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=CYJ00_RS03960;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_015728592.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	5805	6119	.	-	.	ID=gene-CYJ00_RS03965;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=CYJ00_RS03965;old_locus_tag=CYJ00_003970
NZ_PJUS02000144.1	Protein Homology	CDS	5805	6119	.	-	0	ID=cds-WP_014614807.1;Parent=gene-CYJ00_RS03965;Dbxref=GenBank:WP_014614807.1;Name=WP_014614807.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614807.1;locus_tag=CYJ00_RS03965;product=septation regulator SpoVG;protein_id=WP_014614807.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	6198	6578	.	-	.	ID=gene-CYJ00_RS03970;Name=CYJ00_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03970;old_locus_tag=CYJ00_003975
NZ_PJUS02000144.1	Protein Homology	CDS	6198	6578	.	-	0	ID=cds-WP_014614808.1;Parent=gene-CYJ00_RS03970;Dbxref=GenBank:WP_014614808.1;Name=WP_014614808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667755.1;locus_tag=CYJ00_RS03970;product=RidA family protein;protein_id=WP_014614808.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	6603	7424	.	-	.	ID=gene-CYJ00_RS03975;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CYJ00_RS03975;old_locus_tag=CYJ00_003980
NZ_PJUS02000144.1	Protein Homology	CDS	6603	7424	.	-	0	ID=cds-WP_014614809.1;Parent=gene-CYJ00_RS03975;Dbxref=GenBank:WP_014614809.1;Name=WP_014614809.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614809.1;locus_tag=CYJ00_RS03975;product=pur operon repressor;protein_id=WP_014614809.1;transl_table=11
NZ_PJUS02000144.1	RefSeq	gene	7446	8294	.	-	.	ID=gene-CYJ00_RS03980;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CYJ00_RS03980;old_locus_tag=CYJ00_003985
NZ_PJUS02000144.1	Protein Homology	CDS	7446	8294	.	-	0	ID=cds-WP_014614810.1;Parent=gene-CYJ00_RS03980;Dbxref=GenBank:WP_014614810.1;Name=WP_014614810.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=CYJ00_RS03980;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014614810.1;transl_table=11
##sequence-region NZ_PJUS02000264.1 1 9065
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000264.1	RefSeq	region	1	9065	.	+	.	ID=NZ_PJUS02000264.1:1..9065;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000264.1	RefSeq	gene	266	1171	.	-	.	ID=gene-CYJ00_RS07130;Name=CYJ00_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS07130;old_locus_tag=CYJ00_007135
NZ_PJUS02000264.1	Protein Homology	CDS	266	1171	.	-	0	ID=cds-WP_014614394.1;Parent=gene-CYJ00_RS07130;Dbxref=GenBank:WP_014614394.1;Name=WP_014614394.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220049.1;locus_tag=CYJ00_RS07130;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014614394.1;transl_table=11
NZ_PJUS02000264.1	RefSeq	gene	1254	4898	.	-	.	ID=gene-CYJ00_RS07135;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CYJ00_RS07135;old_locus_tag=CYJ00_007140
NZ_PJUS02000264.1	Protein Homology	CDS	1254	4898	.	-	0	ID=cds-WP_063279076.1;Parent=gene-CYJ00_RS07135;Dbxref=GenBank:WP_063279076.1;Name=WP_063279076.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168273.1;locus_tag=CYJ00_RS07135;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_063279076.1;transl_table=11
NZ_PJUS02000264.1	RefSeq	gene	4895	8359	.	-	.	ID=gene-CYJ00_RS07140;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07140;old_locus_tag=CYJ00_007145
NZ_PJUS02000264.1	Protein Homology	CDS	4895	8359	.	-	0	ID=cds-WP_101457789.1;Parent=gene-CYJ00_RS07140;Dbxref=GenBank:WP_101457789.1;Name=WP_101457789.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=CYJ00_RS07140;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_101457789.1;transl_table=11
NZ_PJUS02000264.1	RefSeq	gene	8578	9065	.	-	.	ID=gene-CYJ00_RS07145;Name=lepB;end_range=9065,.;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ00_RS07145;old_locus_tag=CYJ00_007150;partial=true
NZ_PJUS02000264.1	Protein Homology	CDS	8578	9065	.	-	2	ID=cds-WP_101457790.1;Parent=gene-CYJ00_RS07145;Dbxref=GenBank:WP_101457790.1;Name=WP_101457790.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;end_range=9065,.;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168275.1;locus_tag=CYJ00_RS07145;partial=true;product=signal peptidase I;protein_id=WP_101457790.1;transl_table=11
##sequence-region NZ_PJUS02000397.1 1 10845
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000397.1	RefSeq	region	1	10845	.	+	.	ID=NZ_PJUS02000397.1:1..10845;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000397.1	RefSeq	pseudogene	13	471	.	+	.	ID=gene-CYJ00_RS11655;Name=CYJ00_RS11655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11655;old_locus_tag=CYJ00_011660;partial=true;pseudo=true;start_range=.,13
NZ_PJUS02000397.1	Protein Homology	CDS	13	471	.	+	0	ID=cds-CYJ00_RS11655;Parent=gene-CYJ00_RS11655;Note=catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275216.1;locus_tag=CYJ00_RS11655;partial=true;product=type II pantothenate kinase;pseudo=true;start_range=.,13;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	882	1553	.	-	.	ID=gene-CYJ00_RS11660;Name=CYJ00_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11660;old_locus_tag=CYJ00_011665
NZ_PJUS02000397.1	Protein Homology	CDS	882	1553	.	-	0	ID=cds-WP_014613313.1;Parent=gene-CYJ00_RS11660;Dbxref=GenBank:WP_014613313.1;Name=WP_014613313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=CYJ00_RS11660;product=DUF2750 domain-containing protein;protein_id=WP_014613313.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	1670	2860	.	-	.	ID=gene-CYJ00_RS11665;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=CYJ00_RS11665;old_locus_tag=CYJ00_011670
NZ_PJUS02000397.1	Protein Homology	CDS	1670	2860	.	-	0	ID=cds-WP_014613312.1;Parent=gene-CYJ00_RS11665;Dbxref=GenBank:WP_014613312.1;Name=WP_014613312.1;Ontology_term=GO:0006555,GO:1901605,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA,alpha-amino acid metabolic process|1901605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=CYJ00_RS11665;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_014613312.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	2863	3981	.	-	.	ID=gene-CYJ00_RS11670;Name=CYJ00_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11670;old_locus_tag=CYJ00_011675
NZ_PJUS02000397.1	Protein Homology	CDS	2863	3981	.	-	0	ID=cds-WP_051144746.1;Parent=gene-CYJ00_RS11670;Dbxref=GenBank:WP_051144746.1;Name=WP_051144746.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169567.1;locus_tag=CYJ00_RS11670;product=M20 family metallopeptidase;protein_id=WP_051144746.1;transl_table=11
NZ_PJUS02000397.1	cmsearch	riboswitch	4146	4251	.	-	.	ID=id-NZ_PJUS02000397.1:4146..4251;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000397.1	RefSeq	gene	4547	5017	.	+	.	ID=gene-CYJ00_RS11675;Name=CYJ00_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11675;old_locus_tag=CYJ00_011680
NZ_PJUS02000397.1	Protein Homology	CDS	4547	5017	.	+	0	ID=cds-WP_014613310.1;Parent=gene-CYJ00_RS11675;Dbxref=GenBank:WP_014613310.1;Name=WP_014613310.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CYJ00_RS11675;product=S-ribosylhomocysteine lyase;protein_id=WP_014613310.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	5079	5432	.	-	.	ID=gene-CYJ00_RS11680;Name=CYJ00_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11680;old_locus_tag=CYJ00_011685
NZ_PJUS02000397.1	Protein Homology	CDS	5079	5432	.	-	0	ID=cds-WP_014613309.1;Parent=gene-CYJ00_RS11680;Dbxref=GenBank:WP_014613309.1;Name=WP_014613309.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=CYJ00_RS11680;product=DoxX family protein;protein_id=WP_014613309.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	5444	6745	.	-	.	ID=gene-CYJ00_RS11685;Name=CYJ00_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11685;old_locus_tag=CYJ00_011690
NZ_PJUS02000397.1	Protein Homology	CDS	5444	6745	.	-	0	ID=cds-WP_096536383.1;Parent=gene-CYJ00_RS11685;Dbxref=GenBank:WP_096536383.1;Name=WP_096536383.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=CYJ00_RS11685;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_096536383.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	6961	7671	.	+	.	ID=gene-CYJ00_RS11690;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CYJ00_RS11690;old_locus_tag=CYJ00_011695
NZ_PJUS02000397.1	Protein Homology	CDS	6961	7671	.	+	0	ID=cds-WP_015729454.1;Parent=gene-CYJ00_RS11690;Dbxref=GenBank:WP_015729454.1;Name=WP_015729454.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CYJ00_RS11690;product=purine-nucleoside phosphorylase;protein_id=WP_015729454.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	7901	8305	.	-	.	ID=gene-CYJ00_RS11695;Name=CYJ00_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11695;old_locus_tag=CYJ00_011700
NZ_PJUS02000397.1	Protein Homology	CDS	7901	8305	.	-	0	ID=cds-WP_014613306.1;Parent=gene-CYJ00_RS11695;Dbxref=GenBank:WP_014613306.1;Name=WP_014613306.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165774.1;locus_tag=CYJ00_RS11695;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_014613306.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	gene	8370	9800	.	-	.	ID=gene-CYJ00_RS11700;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ00_RS11700;old_locus_tag=CYJ00_011705
NZ_PJUS02000397.1	Protein Homology	CDS	8370	9800	.	-	0	ID=cds-WP_063279103.1;Parent=gene-CYJ00_RS11700;Dbxref=GenBank:WP_063279103.1;Name=WP_063279103.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613305.1;locus_tag=CYJ00_RS11700;product=Na+/H+ antiporter NhaC;protein_id=WP_063279103.1;transl_table=11
NZ_PJUS02000397.1	RefSeq	pseudogene	10530	10845	.	-	.	ID=gene-CYJ00_RS11710;Name=CYJ00_RS11710;end_range=10845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS11710;old_locus_tag=CYJ00_011715;partial=true;pseudo=true
NZ_PJUS02000397.1	Protein Homology	CDS	10530	10845	.	-	1	ID=cds-CYJ00_RS11710;Parent=gene-CYJ00_RS11710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500860.1;locus_tag=CYJ00_RS11710;partial=true;product=EVE domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000404.1 1 8909
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000404.1	RefSeq	region	1	8909	.	+	.	ID=NZ_PJUS02000404.1:1..8909;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000404.1	RefSeq	gene	1	264	.	-	.	ID=gene-CYJ00_RS11835;Name=CYJ00_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11835;old_locus_tag=CYJ00_011840;partial=true;start_range=.,1
NZ_PJUS02000404.1	Protein Homology	CDS	1	264	.	-	0	ID=cds-WP_198597700.1;Parent=gene-CYJ00_RS11835;Dbxref=GenBank:WP_198597700.1;Name=WP_198597700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612965.1;locus_tag=CYJ00_RS11835;partial=true;product=LrgB family protein;protein_id=WP_198597700.1;start_range=.,1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	261	653	.	-	.	ID=gene-CYJ00_RS11840;Name=CYJ00_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11840;old_locus_tag=CYJ00_011845
NZ_PJUS02000404.1	Protein Homology	CDS	261	653	.	-	0	ID=cds-WP_014612964.1;Parent=gene-CYJ00_RS11840;Dbxref=GenBank:WP_014612964.1;Name=WP_014612964.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164941.1;locus_tag=CYJ00_RS11840;product=CidA/LrgA family protein;protein_id=WP_014612964.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	731	1660	.	-	.	ID=gene-CYJ00_RS11845;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CYJ00_RS11845;old_locus_tag=CYJ00_011850
NZ_PJUS02000404.1	Protein Homology	CDS	731	1660	.	-	0	ID=cds-WP_014612963.1;Parent=gene-CYJ00_RS11845;Dbxref=GenBank:WP_014612963.1;Name=WP_014612963.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729636.1;locus_tag=CYJ00_RS11845;product=cidABC operon transcriptional activator CidR;protein_id=WP_014612963.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	1818	3047	.	+	.	ID=gene-CYJ00_RS11850;Name=CYJ00_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11850;old_locus_tag=CYJ00_011855
NZ_PJUS02000404.1	Protein Homology	CDS	1818	3047	.	+	0	ID=cds-WP_063284785.1;Parent=gene-CYJ00_RS11850;Dbxref=GenBank:WP_063284785.1;Name=WP_063284785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167237.1;locus_tag=CYJ00_RS11850;product=MFS transporter;protein_id=WP_063284785.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	3390	4622	.	-	.	ID=gene-CYJ00_RS11860;Name=CYJ00_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11860;old_locus_tag=CYJ00_011865
NZ_PJUS02000404.1	Protein Homology	CDS	3390	4622	.	-	0	ID=cds-WP_015729639.1;Parent=gene-CYJ00_RS11860;Dbxref=GenBank:WP_015729639.1;Name=WP_015729639.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612961.1;locus_tag=CYJ00_RS11860;product=ATP-grasp domain-containing protein;protein_id=WP_015729639.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	4619	5866	.	-	.	ID=gene-CYJ00_RS11865;Name=CYJ00_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11865;old_locus_tag=CYJ00_011870
NZ_PJUS02000404.1	Protein Homology	CDS	4619	5866	.	-	0	ID=cds-WP_014612960.1;Parent=gene-CYJ00_RS11865;Dbxref=GenBank:WP_014612960.1;Name=WP_014612960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612960.1;locus_tag=CYJ00_RS11865;product=ATP-grasp domain-containing protein;protein_id=WP_014612960.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	5885	7570	.	-	.	ID=gene-CYJ00_RS11870;Name=CYJ00_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11870;old_locus_tag=CYJ00_011875
NZ_PJUS02000404.1	Protein Homology	CDS	5885	7570	.	-	0	ID=cds-WP_096536061.1;Parent=gene-CYJ00_RS11870;Dbxref=GenBank:WP_096536061.1;Name=WP_096536061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729641.1;locus_tag=CYJ00_RS11870;product=hypothetical protein;protein_id=WP_096536061.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	7570	7830	.	-	.	ID=gene-CYJ00_RS11875;Name=CYJ00_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11875;old_locus_tag=CYJ00_011880
NZ_PJUS02000404.1	Protein Homology	CDS	7570	7830	.	-	0	ID=cds-WP_020219461.1;Parent=gene-CYJ00_RS11875;Dbxref=GenBank:WP_020219461.1;Name=WP_020219461.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219461.1;locus_tag=CYJ00_RS11875;product=ferredoxin;protein_id=WP_020219461.1;transl_table=11
NZ_PJUS02000404.1	RefSeq	gene	8033	8455	.	-	.	ID=gene-CYJ00_RS11880;Name=CYJ00_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS11880;old_locus_tag=CYJ00_011885
NZ_PJUS02000404.1	Protein Homology	CDS	8033	8455	.	-	0	ID=cds-WP_014612957.1;Parent=gene-CYJ00_RS11880;Dbxref=GenBank:WP_014612957.1;Name=WP_014612957.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=CYJ00_RS11880;product=universal stress protein;protein_id=WP_014612957.1;transl_table=11
##sequence-region NZ_PJUS02000156.1 1 19517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000156.1	RefSeq	region	1	19517	.	+	.	ID=NZ_PJUS02000156.1:1..19517;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000156.1	RefSeq	gene	1	1159	.	-	.	ID=gene-CYJ00_RS04320;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04320;old_locus_tag=CYJ00_004325;partial=true;start_range=.,1
NZ_PJUS02000156.1	Protein Homology	CDS	1	1159	.	-	0	ID=cds-WP_101457654.1;Parent=gene-CYJ00_RS04320;Dbxref=GenBank:WP_101457654.1;Name=WP_101457654.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ00_RS04320;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_101457654.1;start_range=.,1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	1182	2648	.	-	.	ID=gene-CYJ00_RS04325;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04325;old_locus_tag=CYJ00_004330
NZ_PJUS02000156.1	Protein Homology	CDS	1182	2648	.	-	0	ID=cds-WP_014614897.1;Parent=gene-CYJ00_RS04325;Dbxref=GenBank:WP_014614897.1;Name=WP_014614897.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CYJ00_RS04325;product=IMP dehydrogenase;protein_id=WP_014614897.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	2686	3954	.	-	.	ID=gene-CYJ00_RS04330;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=CYJ00_RS04330;old_locus_tag=CYJ00_004335
NZ_PJUS02000156.1	Protein Homology	CDS	2686	3954	.	-	0	ID=cds-WP_015728534.1;Parent=gene-CYJ00_RS04330;Dbxref=GenBank:WP_015728534.1;Name=WP_015728534.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CYJ00_RS04330;product=xanthine permease PbuX;protein_id=WP_015728534.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	3951	4535	.	-	.	ID=gene-CYJ00_RS04335;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CYJ00_RS04335;old_locus_tag=CYJ00_004340
NZ_PJUS02000156.1	Protein Homology	CDS	3951	4535	.	-	0	ID=cds-WP_063284548.1;Parent=gene-CYJ00_RS04335;Dbxref=GenBank:WP_063284548.1;Name=WP_063284548.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166944.1;locus_tag=CYJ00_RS04335;product=xanthine phosphoribosyltransferase;protein_id=WP_063284548.1;transl_table=11
NZ_PJUS02000156.1	cmsearch	riboswitch	4719	4821	.	-	.	ID=id-NZ_PJUS02000156.1:4719..4821;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000156.1	RefSeq	gene	4996	5418	.	+	.	ID=gene-CYJ00_RS04340;Name=CYJ00_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04340;old_locus_tag=CYJ00_004345
NZ_PJUS02000156.1	Protein Homology	CDS	4996	5418	.	+	0	ID=cds-WP_014614900.1;Parent=gene-CYJ00_RS04340;Dbxref=GenBank:WP_014614900.1;Name=WP_014614900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=CYJ00_RS04340;product=general stress protein;protein_id=WP_014614900.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	5614	6288	.	+	.	ID=gene-CYJ00_RS04345;Name=CYJ00_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04345;old_locus_tag=CYJ00_004350
NZ_PJUS02000156.1	Protein Homology	CDS	5614	6288	.	+	0	ID=cds-WP_015728533.1;Parent=gene-CYJ00_RS04345;Dbxref=GenBank:WP_015728533.1;Name=WP_015728533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=CYJ00_RS04345;product=hypothetical protein;protein_id=WP_015728533.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	6402	7001	.	+	.	ID=gene-CYJ00_RS04350;Name=CYJ00_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04350;old_locus_tag=CYJ00_004355
NZ_PJUS02000156.1	Protein Homology	CDS	6402	7001	.	+	0	ID=cds-WP_014614902.1;Parent=gene-CYJ00_RS04350;Dbxref=GenBank:WP_014614902.1;Name=WP_014614902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=CYJ00_RS04350;product=hypothetical protein;protein_id=WP_014614902.1;transl_table=11
NZ_PJUS02000156.1	cmsearch	riboswitch	7082	7184	.	+	.	ID=id-NZ_PJUS02000156.1:7082..7184;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000156.1	RefSeq	gene	7275	8381	.	+	.	ID=gene-CYJ00_RS04355;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CYJ00_RS04355;old_locus_tag=CYJ00_004360
NZ_PJUS02000156.1	Protein Homology	CDS	7275	8381	.	+	0	ID=cds-WP_063284547.1;Parent=gene-CYJ00_RS04355;Dbxref=GenBank:WP_063284547.1;Name=WP_063284547.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=CYJ00_RS04355;product=glycine oxidase ThiO;protein_id=WP_063284547.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	8456	9847	.	+	.	ID=gene-CYJ00_RS04360;Name=CYJ00_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04360;old_locus_tag=CYJ00_004365
NZ_PJUS02000156.1	Protein Homology	CDS	8456	9847	.	+	0	ID=cds-WP_063284546.1;Parent=gene-CYJ00_RS04360;Dbxref=GenBank:WP_063284546.1;Name=WP_063284546.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=CYJ00_RS04360;product=L-cystine transporter;protein_id=WP_063284546.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	9941	10585	.	-	.	ID=gene-CYJ00_RS04365;Name=CYJ00_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04365;old_locus_tag=CYJ00_004370
NZ_PJUS02000156.1	Protein Homology	CDS	9941	10585	.	-	0	ID=cds-WP_015728530.1;Parent=gene-CYJ00_RS04365;Dbxref=GenBank:WP_015728530.1;Name=WP_015728530.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728530.1;locus_tag=CYJ00_RS04365;product=ATP-binding cassette domain-containing protein;protein_id=WP_015728530.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	10582	10911	.	-	.	ID=gene-CYJ00_RS04370;Name=CYJ00_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04370;old_locus_tag=CYJ00_004375
NZ_PJUS02000156.1	Protein Homology	CDS	10582	10911	.	-	0	ID=cds-WP_015728529.1;Parent=gene-CYJ00_RS04370;Dbxref=GenBank:WP_015728529.1;Name=WP_015728529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614906.1;locus_tag=CYJ00_RS04370;product=YxeA family protein;protein_id=WP_015728529.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	10915	12882	.	-	.	ID=gene-CYJ00_RS04375;Name=CYJ00_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04375;old_locus_tag=CYJ00_004380
NZ_PJUS02000156.1	Protein Homology	CDS	10915	12882	.	-	0	ID=cds-WP_015728528.1;Parent=gene-CYJ00_RS04375;Dbxref=GenBank:WP_015728528.1;Name=WP_015728528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614907.1;locus_tag=CYJ00_RS04375;product=DUF1430 domain-containing protein;protein_id=WP_015728528.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	13140	13895	.	-	.	ID=gene-CYJ00_RS04380;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04380;old_locus_tag=CYJ00_004385
NZ_PJUS02000156.1	Protein Homology	CDS	13140	13895	.	-	0	ID=cds-WP_063284545.1;Parent=gene-CYJ00_RS04380;Dbxref=GenBank:WP_063284545.1;Name=WP_063284545.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276836.1;locus_tag=CYJ00_RS04380;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_063284545.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	14448	15017	.	+	.	ID=gene-CYJ00_RS04385;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04385;old_locus_tag=CYJ00_004390
NZ_PJUS02000156.1	Protein Homology	CDS	14448	15017	.	+	0	ID=cds-WP_014614909.1;Parent=gene-CYJ00_RS04385;Dbxref=GenBank:WP_014614909.1;Name=WP_014614909.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CYJ00_RS04385;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_014614909.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	15032	16555	.	+	.	ID=gene-CYJ00_RS04390;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CYJ00_RS04390;old_locus_tag=CYJ00_004395
NZ_PJUS02000156.1	Protein Homology	CDS	15032	16555	.	+	0	ID=cds-WP_015728526.1;Parent=gene-CYJ00_RS04390;Dbxref=GenBank:WP_015728526.1;Name=WP_015728526.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451490.1;locus_tag=CYJ00_RS04390;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_015728526.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	16756	17697	.	-	.	ID=gene-CYJ00_RS04395;Name=CYJ00_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04395;old_locus_tag=CYJ00_004400
NZ_PJUS02000156.1	Protein Homology	CDS	16756	17697	.	-	0	ID=cds-WP_014614911.1;Parent=gene-CYJ00_RS04395;Dbxref=GenBank:WP_014614911.1;Name=WP_014614911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=CYJ00_RS04395;product=DUF1002 domain-containing protein;protein_id=WP_014614911.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	17815	18804	.	-	.	ID=gene-CYJ00_RS04400;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04400;old_locus_tag=CYJ00_004405
NZ_PJUS02000156.1	Protein Homology	CDS	17815	18804	.	-	0	ID=cds-WP_014614912.1;Parent=gene-CYJ00_RS04400;Dbxref=GenBank:WP_014614912.1;Name=WP_014614912.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=CYJ00_RS04400;product=biotin synthase BioB;protein_id=WP_014614912.1;transl_table=11
NZ_PJUS02000156.1	RefSeq	gene	19010	19387	.	+	.	ID=gene-CYJ00_RS04405;Name=CYJ00_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04405;old_locus_tag=CYJ00_004410
NZ_PJUS02000156.1	Protein Homology	CDS	19010	19387	.	+	0	ID=cds-WP_014614913.1;Parent=gene-CYJ00_RS04405;Dbxref=GenBank:WP_014614913.1;Name=WP_014614913.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=CYJ00_RS04405;product=iron chaperone;protein_id=WP_014614913.1;transl_table=11
##sequence-region NZ_PJUS02000303.1 1 9771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000303.1	RefSeq	region	1	9771	.	+	.	ID=NZ_PJUS02000303.1:1..9771;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000303.1	RefSeq	gene	1	439	.	+	.	ID=gene-CYJ00_RS08100;Name=CYJ00_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08100;old_locus_tag=CYJ00_008105;partial=true;start_range=.,1
NZ_PJUS02000303.1	Protein Homology	CDS	1	439	.	+	1	ID=cds-WP_490327964.1;Parent=gene-CYJ00_RS08100;Dbxref=GenBank:WP_490327964.1;Name=WP_490327964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219793.1;locus_tag=CYJ00_RS08100;partial=true;product=thiaminase II/PqqC family protein;protein_id=WP_490327964.1;start_range=.,1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	565	1197	.	-	.	ID=gene-CYJ00_RS08105;Name=CYJ00_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08105;old_locus_tag=CYJ00_008110
NZ_PJUS02000303.1	Protein Homology	CDS	565	1197	.	-	0	ID=cds-WP_014613100.1;Parent=gene-CYJ00_RS08105;Dbxref=GenBank:WP_014613100.1;Name=WP_014613100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729578.1;locus_tag=CYJ00_RS08105;product=hypothetical protein;protein_id=WP_014613100.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	1358	1693	.	+	.	ID=gene-CYJ00_RS08110;Name=CYJ00_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08110;old_locus_tag=CYJ00_008115
NZ_PJUS02000303.1	Protein Homology	CDS	1358	1693	.	+	0	ID=cds-WP_014613101.1;Parent=gene-CYJ00_RS08110;Dbxref=GenBank:WP_014613101.1;Name=WP_014613101.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613101.1;locus_tag=CYJ00_RS08110;product=thioredoxin family protein;protein_id=WP_014613101.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	1816	2718	.	+	.	ID=gene-CYJ00_RS08115;Name=CYJ00_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08115;old_locus_tag=CYJ00_008120
NZ_PJUS02000303.1	Protein Homology	CDS	1816	2718	.	+	0	ID=cds-WP_014613102.1;Parent=gene-CYJ00_RS08115;Dbxref=GenBank:WP_014613102.1;Name=WP_014613102.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613102.1;locus_tag=CYJ00_RS08115;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_014613102.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	pseudogene	3295	3378	.	-	.	ID=gene-CYJ00_RS13620;Name=CYJ00_RS13620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13620;partial=true;pseudo=true;start_range=.,3295
NZ_PJUS02000303.1	Protein Homology	CDS	3295	3378	.	-	0	ID=cds-CYJ00_RS13620;Parent=gene-CYJ00_RS13620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=CYJ00_RS13620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3295;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	3341	4327	.	+	.	ID=gene-CYJ00_RS08120;Name=CYJ00_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08120;old_locus_tag=CYJ00_008125
NZ_PJUS02000303.1	Protein Homology	CDS	3341	4327	.	+	0	ID=cds-WP_225550179.1;Parent=gene-CYJ00_RS08120;Dbxref=GenBank:WP_225550179.1;Name=WP_225550179.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=CYJ00_RS08120;product=PTS sugar transporter subunit IIC;protein_id=WP_225550179.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	4386	4862	.	-	.	ID=gene-CYJ00_RS08125;Name=CYJ00_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08125;old_locus_tag=CYJ00_008130
NZ_PJUS02000303.1	Protein Homology	CDS	4386	4862	.	-	0	ID=cds-WP_015729576.1;Parent=gene-CYJ00_RS08125;Dbxref=GenBank:WP_015729576.1;Name=WP_015729576.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729576.1;locus_tag=CYJ00_RS08125;product=thioesterase family protein;protein_id=WP_015729576.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	5038	6069	.	+	.	ID=gene-CYJ00_RS08130;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=CYJ00_RS08130;old_locus_tag=CYJ00_008135
NZ_PJUS02000303.1	Protein Homology	CDS	5038	6069	.	+	0	ID=cds-WP_014613105.1;Parent=gene-CYJ00_RS08130;Dbxref=GenBank:WP_014613105.1;Name=WP_014613105.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=CYJ00_RS08130;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_014613105.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	6243	7448	.	+	.	ID=gene-CYJ00_RS08135;Name=CYJ00_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08135;old_locus_tag=CYJ00_008140
NZ_PJUS02000303.1	Protein Homology	CDS	6243	7448	.	+	0	ID=cds-WP_063278986.1;Parent=gene-CYJ00_RS08135;Dbxref=GenBank:WP_063278986.1;Name=WP_063278986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169589.1;locus_tag=CYJ00_RS08135;product=GTP-binding protein;protein_id=WP_063278986.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	7476	8687	.	-	.	ID=gene-CYJ00_RS08140;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CYJ00_RS08140;old_locus_tag=CYJ00_008145
NZ_PJUS02000303.1	Protein Homology	CDS	7476	8687	.	-	0	ID=cds-WP_063278985.1;Parent=gene-CYJ00_RS08140;Dbxref=GenBank:WP_063278985.1;Name=WP_063278985.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=CYJ00_RS08140;product=sodium/glutamate symporter;protein_id=WP_063278985.1;transl_table=11
NZ_PJUS02000303.1	RefSeq	gene	8859	9719	.	-	.	ID=gene-CYJ00_RS08145;Name=CYJ00_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08145;old_locus_tag=CYJ00_008150
NZ_PJUS02000303.1	Protein Homology	CDS	8859	9719	.	-	0	ID=cds-WP_015729572.1;Parent=gene-CYJ00_RS08145;Dbxref=GenBank:WP_015729572.1;Name=WP_015729572.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729572.1;locus_tag=CYJ00_RS08145;product=AraC family transcriptional regulator;protein_id=WP_015729572.1;transl_table=11
##sequence-region NZ_PJUS02000047.1 1 12159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000047.1	RefSeq	region	1	12159	.	+	.	ID=NZ_PJUS02000047.1:1..12159;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000047.1	RefSeq	gene	1	1184	.	-	.	ID=gene-CYJ00_RS01270;Name=CYJ00_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01270;old_locus_tag=CYJ00_001270;partial=true;start_range=.,1
NZ_PJUS02000047.1	Protein Homology	CDS	1	1184	.	-	0	ID=cds-WP_274539969.1;Parent=gene-CYJ00_RS01270;Dbxref=GenBank:WP_274539969.1;Name=WP_274539969.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614166.1;locus_tag=CYJ00_RS01270;partial=true;product=sialidase domain-containing protein;protein_id=WP_274539969.1;start_range=.,1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	1199	1648	.	-	.	ID=gene-CYJ00_RS01275;Name=CYJ00_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01275;old_locus_tag=CYJ00_001275
NZ_PJUS02000047.1	Protein Homology	CDS	1199	1648	.	-	0	ID=cds-WP_014614167.1;Parent=gene-CYJ00_RS01275;Dbxref=GenBank:WP_014614167.1;Name=WP_014614167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614167.1;locus_tag=CYJ00_RS01275;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_014614167.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	1667	3208	.	-	.	ID=gene-CYJ00_RS01280;Name=CYJ00_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01280;old_locus_tag=CYJ00_001280
NZ_PJUS02000047.1	Protein Homology	CDS	1667	3208	.	-	0	ID=cds-WP_063284595.1;Parent=gene-CYJ00_RS01280;Dbxref=GenBank:WP_063284595.1;Name=WP_063284595.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614168.1;locus_tag=CYJ00_RS01280;product=sodium:solute symporter family protein;protein_id=WP_063284595.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	3236	4159	.	-	.	ID=gene-CYJ00_RS01285;Name=CYJ00_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01285;old_locus_tag=CYJ00_001285
NZ_PJUS02000047.1	Protein Homology	CDS	3236	4159	.	-	0	ID=cds-WP_101457791.1;Parent=gene-CYJ00_RS01285;Dbxref=GenBank:WP_101457791.1;Name=WP_101457791.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165656.1;locus_tag=CYJ00_RS01285;product=dihydrodipicolinate synthase family protein;protein_id=WP_101457791.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	4256	5083	.	-	.	ID=gene-CYJ00_RS01290;Name=CYJ00_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01290;old_locus_tag=CYJ00_001290
NZ_PJUS02000047.1	Protein Homology	CDS	4256	5083	.	-	0	ID=cds-WP_063284593.1;Parent=gene-CYJ00_RS01290;Dbxref=GenBank:WP_063284593.1;Name=WP_063284593.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614170.1;locus_tag=CYJ00_RS01290;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063284593.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	5440	6321	.	+	.	ID=gene-CYJ00_RS01295;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=CYJ00_RS01295;old_locus_tag=CYJ00_001295
NZ_PJUS02000047.1	Protein Homology	CDS	5440	6321	.	+	0	ID=cds-WP_014614171.1;Parent=gene-CYJ00_RS01295;Dbxref=GenBank:WP_014614171.1;Name=WP_014614171.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CYJ00_RS01295;product=ribose/proton symporter RbsU;protein_id=WP_014614171.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	6340	6744	.	+	.	ID=gene-CYJ00_RS01300;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CYJ00_RS01300;old_locus_tag=CYJ00_001300
NZ_PJUS02000047.1	Protein Homology	CDS	6340	6744	.	+	0	ID=cds-WP_014614172.1;Parent=gene-CYJ00_RS01300;Dbxref=GenBank:WP_014614172.1;Name=WP_014614172.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=CYJ00_RS01300;product=D-ribose pyranase;protein_id=WP_014614172.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	6975	7268	.	-	.	ID=gene-CYJ00_RS01305;Name=CYJ00_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01305;old_locus_tag=CYJ00_001305
NZ_PJUS02000047.1	Protein Homology	CDS	6975	7268	.	-	0	ID=cds-WP_015728996.1;Parent=gene-CYJ00_RS01305;Dbxref=GenBank:WP_015728996.1;Name=WP_015728996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=CYJ00_RS01305;product=YggT family protein;protein_id=WP_015728996.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	7280	7840	.	-	.	ID=gene-CYJ00_RS01310;Name=CYJ00_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01310;old_locus_tag=CYJ00_001310
NZ_PJUS02000047.1	Protein Homology	CDS	7280	7840	.	-	0	ID=cds-WP_014614174.1;Parent=gene-CYJ00_RS01310;Dbxref=GenBank:WP_014614174.1;Name=WP_014614174.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=CYJ00_RS01310;product=cell division protein SepF;protein_id=WP_014614174.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	7846	8520	.	-	.	ID=gene-CYJ00_RS01315;Name=CYJ00_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS01315;old_locus_tag=CYJ00_001315
NZ_PJUS02000047.1	Protein Homology	CDS	7846	8520	.	-	0	ID=cds-WP_014614175.1;Parent=gene-CYJ00_RS01315;Dbxref=GenBank:WP_014614175.1;Name=WP_014614175.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263997.1;locus_tag=CYJ00_RS01315;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_014614175.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	8521	9333	.	-	.	ID=gene-CYJ00_RS01320;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=CYJ00_RS01320;old_locus_tag=CYJ00_001320
NZ_PJUS02000047.1	Protein Homology	CDS	8521	9333	.	-	0	ID=cds-WP_063284592.1;Parent=gene-CYJ00_RS01320;Dbxref=GenBank:WP_063284592.1;Name=WP_063284592.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=CYJ00_RS01320;product=peptidoglycan editing factor PgeF;protein_id=WP_063284592.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	9487	10659	.	-	.	ID=gene-CYJ00_RS01325;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CYJ00_RS01325;old_locus_tag=CYJ00_001325
NZ_PJUS02000047.1	Protein Homology	CDS	9487	10659	.	-	0	ID=cds-WP_014614177.1;Parent=gene-CYJ00_RS01325;Dbxref=GenBank:WP_014614177.1;Name=WP_014614177.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169110.1;locus_tag=CYJ00_RS01325;product=cell division protein FtsZ;protein_id=WP_014614177.1;transl_table=11
NZ_PJUS02000047.1	RefSeq	gene	10689	12089	.	-	.	ID=gene-CYJ00_RS01330;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS01330;old_locus_tag=CYJ00_001330
NZ_PJUS02000047.1	Protein Homology	CDS	10689	12089	.	-	0	ID=cds-WP_014614178.1;Parent=gene-CYJ00_RS01330;Dbxref=GenBank:WP_014614178.1;Name=WP_014614178.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=CYJ00_RS01330;product=cell division protein FtsA;protein_id=WP_014614178.1;transl_table=11
##sequence-region NZ_PJUS02000160.1 1 13103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000160.1	RefSeq	region	1	13103	.	+	.	ID=NZ_PJUS02000160.1:1..13103;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000160.1	RefSeq	gene	11	1351	.	+	.	ID=gene-CYJ00_RS04470;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04470;old_locus_tag=CYJ00_004475
NZ_PJUS02000160.1	Protein Homology	CDS	11	1351	.	+	0	ID=cds-WP_065520470.1;Parent=gene-CYJ00_RS04470;Dbxref=GenBank:WP_065520470.1;Name=WP_065520470.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729283.1;locus_tag=CYJ00_RS04470;product=glutamyl-tRNA reductase;protein_id=WP_065520470.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	1531	2202	.	+	.	ID=gene-CYJ00_RS04475;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04475;old_locus_tag=CYJ00_004480
NZ_PJUS02000160.1	Protein Homology	CDS	1531	2202	.	+	0	ID=cds-WP_224397735.1;Parent=gene-CYJ00_RS04475;Dbxref=GenBank:WP_224397735.1;Name=WP_224397735.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.8;locus_tag=CYJ00_RS04475;product=cytochrome c biogenesis protein CcsA;protein_id=WP_224397735.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	2228	3157	.	+	.	ID=gene-CYJ00_RS04480;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CYJ00_RS04480;old_locus_tag=CYJ00_004485
NZ_PJUS02000160.1	Protein Homology	CDS	2228	3157	.	+	0	ID=cds-WP_037542832.1;Parent=gene-CYJ00_RS04480;Dbxref=GenBank:WP_037542832.1;Name=WP_037542832.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729281.1;locus_tag=CYJ00_RS04480;product=hydroxymethylbilane synthase;protein_id=WP_037542832.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	3161	3838	.	+	.	ID=gene-CYJ00_RS04485;Name=CYJ00_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04485;old_locus_tag=CYJ00_004490
NZ_PJUS02000160.1	Protein Homology	CDS	3161	3838	.	+	0	ID=cds-WP_101457794.1;Parent=gene-CYJ00_RS04485;Dbxref=GenBank:WP_101457794.1;Name=WP_101457794.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=CYJ00_RS04485;product=uroporphyrinogen-III synthase;protein_id=WP_101457794.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	3838	4815	.	+	.	ID=gene-CYJ00_RS04490;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CYJ00_RS04490;old_locus_tag=CYJ00_004495
NZ_PJUS02000160.1	Protein Homology	CDS	3838	4815	.	+	0	ID=cds-WP_014613705.1;Parent=gene-CYJ00_RS04490;Dbxref=GenBank:WP_014613705.1;Name=WP_014613705.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=CYJ00_RS04490;product=porphobilinogen synthase;protein_id=WP_014613705.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	4831	6117	.	+	.	ID=gene-CYJ00_RS04495;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CYJ00_RS04495;old_locus_tag=CYJ00_004500
NZ_PJUS02000160.1	Protein Homology	CDS	4831	6117	.	+	0	ID=cds-WP_014613706.1;Parent=gene-CYJ00_RS04495;Dbxref=GenBank:WP_014613706.1;Name=WP_014613706.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638191.1;locus_tag=CYJ00_RS04495;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014613706.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	6376	7458	.	+	.	ID=gene-CYJ00_RS04500;Name=CYJ00_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04500;old_locus_tag=CYJ00_004505
NZ_PJUS02000160.1	Protein Homology	CDS	6376	7458	.	+	0	ID=cds-WP_015729279.1;Parent=gene-CYJ00_RS04500;Dbxref=GenBank:WP_015729279.1;Name=WP_015729279.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219738.1;locus_tag=CYJ00_RS04500;product=AbrB family transcriptional regulator;protein_id=WP_015729279.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	7543	8091	.	-	.	ID=gene-CYJ00_RS04505;Name=CYJ00_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04505;old_locus_tag=CYJ00_004510
NZ_PJUS02000160.1	Protein Homology	CDS	7543	8091	.	-	0	ID=cds-WP_015729278.1;Parent=gene-CYJ00_RS04505;Dbxref=GenBank:WP_015729278.1;Name=WP_015729278.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=CYJ00_RS04505;product=DNA-3-methyladenine glycosylase I;protein_id=WP_015729278.1;transl_table=11
NZ_PJUS02000160.1	cmsearch	binding_site	8150	8372	.	+	.	ID=id-NZ_PJUS02000160.1:8150..8372;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000160.1	RefSeq	gene	8411	11041	.	+	.	ID=gene-CYJ00_RS04510;Name=CYJ00_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04510;old_locus_tag=CYJ00_004515
NZ_PJUS02000160.1	Protein Homology	CDS	8411	11041	.	+	0	ID=cds-WP_014613709.1;Parent=gene-CYJ00_RS04510;Dbxref=GenBank:WP_014613709.1;Name=WP_014613709.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=CYJ00_RS04510;product=valine--tRNA ligase;protein_id=WP_014613709.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	11053	12321	.	+	.	ID=gene-CYJ00_RS04515;Name=CYJ00_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04515;old_locus_tag=CYJ00_004520
NZ_PJUS02000160.1	Protein Homology	CDS	11053	12321	.	+	0	ID=cds-WP_101457793.1;Parent=gene-CYJ00_RS04515;Dbxref=GenBank:WP_101457793.1;Name=WP_101457793.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169487.1;locus_tag=CYJ00_RS04515;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_101457793.1;transl_table=11
NZ_PJUS02000160.1	RefSeq	gene	12509	13103	.	+	.	ID=gene-CYJ00_RS04520;Name=CYJ00_RS04520;end_range=13103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04520;old_locus_tag=CYJ00_004525;partial=true
NZ_PJUS02000160.1	Protein Homology	CDS	12509	13103	.	+	0	ID=cds-WP_270867603.1;Parent=gene-CYJ00_RS04520;Dbxref=GenBank:WP_270867603.1;Name=WP_270867603.1;end_range=13103,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=CYJ00_RS04520;partial=true;product=prepilin peptidase;protein_id=WP_270867603.1;transl_table=11
##sequence-region NZ_PJUS02000252.1 1 9801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000252.1	RefSeq	region	1	9801	.	+	.	ID=NZ_PJUS02000252.1:1..9801;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000252.1	RefSeq	gene	22	468	.	-	.	ID=gene-CYJ00_RS06925;Name=CYJ00_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06925;old_locus_tag=CYJ00_006930
NZ_PJUS02000252.1	Protein Homology	CDS	22	468	.	-	0	ID=cds-WP_063278869.1;Parent=gene-CYJ00_RS06925;Dbxref=GenBank:WP_063278869.1;Name=WP_063278869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614645.1;locus_tag=CYJ00_RS06925;product=Na+/H+ antiporter subunit G;protein_id=WP_063278869.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	452	745	.	-	.	ID=gene-CYJ00_RS06930;Name=CYJ00_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06930;old_locus_tag=CYJ00_006935
NZ_PJUS02000252.1	Protein Homology	CDS	452	745	.	-	0	ID=cds-WP_014614646.1;Parent=gene-CYJ00_RS06930;Dbxref=GenBank:WP_014614646.1;Name=WP_014614646.1;Ontology_term=GO:0034220,GO:0015075,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167327.1;locus_tag=CYJ00_RS06930;product=monovalent cation/H+ antiporter complex subunit F;protein_id=WP_014614646.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	742	1224	.	-	.	ID=gene-CYJ00_RS06935;Name=CYJ00_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06935;old_locus_tag=CYJ00_006940
NZ_PJUS02000252.1	Protein Homology	CDS	742	1224	.	-	0	ID=cds-WP_014614647.1;Parent=gene-CYJ00_RS06935;Dbxref=GenBank:WP_014614647.1;Name=WP_014614647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898376.1;locus_tag=CYJ00_RS06935;product=Na+/H+ antiporter subunit E;protein_id=WP_014614647.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	1225	2724	.	-	.	ID=gene-CYJ00_RS06940;Name=CYJ00_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06940;old_locus_tag=CYJ00_006945
NZ_PJUS02000252.1	Protein Homology	CDS	1225	2724	.	-	0	ID=cds-WP_070407484.1;Parent=gene-CYJ00_RS06940;Dbxref=GenBank:WP_070407484.1;Name=WP_070407484.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166250.1;locus_tag=CYJ00_RS06940;product=Na+/H+ antiporter subunit D;protein_id=WP_070407484.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	2717	3061	.	-	.	ID=gene-CYJ00_RS06945;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=CYJ00_RS06945;old_locus_tag=CYJ00_006950
NZ_PJUS02000252.1	Protein Homology	CDS	2717	3061	.	-	0	ID=cds-WP_014614649.1;Parent=gene-CYJ00_RS06945;Dbxref=GenBank:WP_014614649.1;Name=WP_014614649.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451046.1;locus_tag=CYJ00_RS06945;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_014614649.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	3058	3483	.	-	.	ID=gene-CYJ00_RS06950;Name=CYJ00_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06950;old_locus_tag=CYJ00_006955
NZ_PJUS02000252.1	Protein Homology	CDS	3058	3483	.	-	0	ID=cds-WP_014614650.1;Parent=gene-CYJ00_RS06950;Dbxref=GenBank:WP_014614650.1;Name=WP_014614650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=CYJ00_RS06950;product=monovalent cation/H+ antiporter subunit B;protein_id=WP_014614650.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	3470	5860	.	-	.	ID=gene-CYJ00_RS06955;Name=CYJ00_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06955;old_locus_tag=CYJ00_006960
NZ_PJUS02000252.1	Protein Homology	CDS	3470	5860	.	-	0	ID=cds-WP_101457796.1;Parent=gene-CYJ00_RS06955;Dbxref=GenBank:WP_101457796.1;Name=WP_101457796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167332.1;locus_tag=CYJ00_RS06955;product=DUF4040 family protein;protein_id=WP_101457796.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	5882	6433	.	-	.	ID=gene-CYJ00_RS06960;Name=CYJ00_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06960;old_locus_tag=CYJ00_006965
NZ_PJUS02000252.1	Protein Homology	CDS	5882	6433	.	-	0	ID=cds-WP_014614652.1;Parent=gene-CYJ00_RS06960;Dbxref=GenBank:WP_014614652.1;Name=WP_014614652.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=CYJ00_RS06960;product=tyrosine-type recombinase/integrase;protein_id=WP_014614652.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	6576	6779	.	+	.	ID=gene-CYJ00_RS06965;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06965;old_locus_tag=CYJ00_006970
NZ_PJUS02000252.1	Protein Homology	CDS	6576	6779	.	+	0	ID=cds-WP_014614653.1;Parent=gene-CYJ00_RS06965;Dbxref=GenBank:WP_014614653.1;Name=WP_014614653.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=CYJ00_RS06965;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_014614653.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	6795	7010	.	+	.	ID=gene-CYJ00_RS06970;Name=CYJ00_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06970;old_locus_tag=CYJ00_006975
NZ_PJUS02000252.1	Protein Homology	CDS	6795	7010	.	+	0	ID=cds-WP_014614654.1;Parent=gene-CYJ00_RS06970;Dbxref=GenBank:WP_014614654.1;Name=WP_014614654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167335.1;locus_tag=CYJ00_RS06970;product=DUF2922 domain-containing protein;protein_id=WP_014614654.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	7351	7620	.	-	.	ID=gene-CYJ00_RS06975;Name=CYJ00_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06975;old_locus_tag=CYJ00_006980
NZ_PJUS02000252.1	Protein Homology	CDS	7351	7620	.	-	0	ID=cds-WP_101457797.1;Parent=gene-CYJ00_RS06975;Dbxref=GenBank:WP_101457797.1;Name=WP_101457797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728682.1;locus_tag=CYJ00_RS06975;product=hypothetical protein;protein_id=WP_101457797.1;transl_table=11
NZ_PJUS02000252.1	RefSeq	gene	7834	8763	.	+	.	ID=gene-CYJ00_RS06980;Name=CYJ00_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06980;old_locus_tag=CYJ00_006985
NZ_PJUS02000252.1	Protein Homology	CDS	7834	8763	.	+	0	ID=cds-WP_101457798.1;Parent=gene-CYJ00_RS06980;Dbxref=GenBank:WP_101457798.1;Name=WP_101457798.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=CYJ00_RS06980;product=DMT family transporter;protein_id=WP_101457798.1;transl_table=11
##sequence-region NZ_PJUS02000341.1 1 10404
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000341.1	RefSeq	region	1	10404	.	+	.	ID=NZ_PJUS02000341.1:1..10404;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000341.1	RefSeq	gene	249	1202	.	+	.	ID=gene-CYJ00_RS10440;Name=CYJ00_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10440;old_locus_tag=CYJ00_010450
NZ_PJUS02000341.1	Protein Homology	CDS	249	1202	.	+	0	ID=cds-WP_065354721.1;Parent=gene-CYJ00_RS10440;Dbxref=GenBank:WP_065354721.1;Name=WP_065354721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219643.1;locus_tag=CYJ00_RS10440;product=ornithine cyclodeaminase family protein;protein_id=WP_065354721.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	1251	1997	.	-	.	ID=gene-CYJ00_RS10445;Name=CYJ00_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10445;old_locus_tag=CYJ00_010455
NZ_PJUS02000341.1	Protein Homology	CDS	1251	1997	.	-	0	ID=cds-WP_014613645.1;Parent=gene-CYJ00_RS10445;Dbxref=GenBank:WP_014613645.1;Name=WP_014613645.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613645.1;locus_tag=CYJ00_RS10445;product=glycerophosphodiester phosphodiesterase;protein_id=WP_014613645.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	2072	2530	.	+	.	ID=gene-CYJ00_RS10450;Name=CYJ00_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10450;old_locus_tag=CYJ00_010460
NZ_PJUS02000341.1	Protein Homology	CDS	2072	2530	.	+	0	ID=cds-WP_065354720.1;Parent=gene-CYJ00_RS10450;Dbxref=GenBank:WP_065354720.1;Name=WP_065354720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=CYJ00_RS10450;product=SACOL1771 family peroxiredoxin;protein_id=WP_065354720.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	2691	3851	.	+	.	ID=gene-CYJ00_RS10455;Name=CYJ00_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10455;old_locus_tag=CYJ00_010465
NZ_PJUS02000341.1	Protein Homology	CDS	2691	3851	.	+	0	ID=cds-WP_096533591.1;Parent=gene-CYJ00_RS10455;Dbxref=GenBank:WP_096533591.1;Name=WP_096533591.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=CYJ00_RS10455;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_096533591.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	3841	5436	.	+	.	ID=gene-CYJ00_RS10460;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CYJ00_RS10460;old_locus_tag=CYJ00_010470
NZ_PJUS02000341.1	Protein Homology	CDS	3841	5436	.	+	0	ID=cds-WP_096533590.1;Parent=gene-CYJ00_RS10460;Dbxref=GenBank:WP_096533590.1;Name=WP_096533590.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165053.1;locus_tag=CYJ00_RS10460;product=phosphoglycerate dehydrogenase;protein_id=WP_096533590.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	5488	6612	.	-	.	ID=gene-CYJ00_RS10465;Name=CYJ00_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10465;old_locus_tag=CYJ00_010475
NZ_PJUS02000341.1	Protein Homology	CDS	5488	6612	.	-	0	ID=cds-WP_096548012.1;Parent=gene-CYJ00_RS10465;Dbxref=GenBank:WP_096548012.1;Name=WP_096548012.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=CYJ00_RS10465;product=HAD family hydrolase;protein_id=WP_096548012.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	6820	7437	.	-	.	ID=gene-CYJ00_RS10470;Name=CYJ00_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10470;old_locus_tag=CYJ00_010480
NZ_PJUS02000341.1	Protein Homology	CDS	6820	7437	.	-	0	ID=cds-WP_014613640.1;Parent=gene-CYJ00_RS10470;Dbxref=GenBank:WP_014613640.1;Name=WP_014613640.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165051.1;locus_tag=CYJ00_RS10470;product=lysophospholipid acyltransferase family protein;protein_id=WP_014613640.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	7592	8863	.	+	.	ID=gene-CYJ00_RS10475;Name=CYJ00_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS10475;old_locus_tag=CYJ00_010485
NZ_PJUS02000341.1	Protein Homology	CDS	7592	8863	.	+	0	ID=cds-WP_101431467.1;Parent=gene-CYJ00_RS10475;Dbxref=GenBank:WP_101431467.1;Name=WP_101431467.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219646.1;locus_tag=CYJ00_RS10475;product=S1C family serine protease;protein_id=WP_101431467.1;transl_table=11
NZ_PJUS02000341.1	RefSeq	gene	8917	10179	.	-	.	ID=gene-CYJ00_RS10480;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CYJ00_RS10480;old_locus_tag=CYJ00_010490
NZ_PJUS02000341.1	Protein Homology	CDS	8917	10179	.	-	0	ID=cds-WP_014613638.1;Parent=gene-CYJ00_RS10480;Dbxref=GenBank:WP_014613638.1;Name=WP_014613638.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=CYJ00_RS10480;product=tyrosine--tRNA ligase;protein_id=WP_014613638.1;transl_table=11
##sequence-region NZ_PJUS02000208.1 1 14376
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000208.1	RefSeq	region	1	14376	.	+	.	ID=NZ_PJUS02000208.1:1..14376;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000208.1	RefSeq	gene	240	1346	.	+	.	ID=gene-CYJ00_RS05750;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CYJ00_RS05750;old_locus_tag=CYJ00_005755
NZ_PJUS02000208.1	Protein Homology	CDS	240	1346	.	+	0	ID=cds-WP_014613804.1;Parent=gene-CYJ00_RS05750;Dbxref=GenBank:WP_014613804.1;Name=WP_014613804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219631.1;locus_tag=CYJ00_RS05750;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_014613804.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	1620	2027	.	-	.	ID=gene-CYJ00_RS05755;Name=CYJ00_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05755;old_locus_tag=CYJ00_005760
NZ_PJUS02000208.1	Protein Homology	CDS	1620	2027	.	-	0	ID=cds-WP_014613803.1;Parent=gene-CYJ00_RS05755;Dbxref=GenBank:WP_014613803.1;Name=WP_014613803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168672.1;locus_tag=CYJ00_RS05755;product=Fur family transcriptional regulator;protein_id=WP_014613803.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	1990	2877	.	-	.	ID=gene-CYJ00_RS05760;Name=CYJ00_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05760;old_locus_tag=CYJ00_005765
NZ_PJUS02000208.1	Protein Homology	CDS	1990	2877	.	-	0	ID=cds-WP_014613802.1;Parent=gene-CYJ00_RS05760;Dbxref=GenBank:WP_014613802.1;Name=WP_014613802.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=CYJ00_RS05760;product=metal ABC transporter permease;protein_id=WP_014613802.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	2874	3644	.	-	.	ID=gene-CYJ00_RS05765;Name=CYJ00_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05765;old_locus_tag=CYJ00_005770
NZ_PJUS02000208.1	Protein Homology	CDS	2874	3644	.	-	0	ID=cds-WP_014613801.1;Parent=gene-CYJ00_RS05765;Dbxref=GenBank:WP_014613801.1;Name=WP_014613801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219767.1;locus_tag=CYJ00_RS05765;product=metal ABC transporter ATP-binding protein;protein_id=WP_014613801.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	3829	4722	.	-	.	ID=gene-CYJ00_RS05770;Name=CYJ00_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05770;old_locus_tag=CYJ00_005775
NZ_PJUS02000208.1	Protein Homology	CDS	3829	4722	.	-	0	ID=cds-WP_015729240.1;Parent=gene-CYJ00_RS05770;Dbxref=GenBank:WP_015729240.1;Name=WP_015729240.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219766.1;locus_tag=CYJ00_RS05770;product=deoxyribonuclease IV;protein_id=WP_015729240.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	4747	6081	.	-	.	ID=gene-CYJ00_RS05775;Name=CYJ00_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05775;old_locus_tag=CYJ00_005780
NZ_PJUS02000208.1	Protein Homology	CDS	4747	6081	.	-	0	ID=cds-WP_014613799.1;Parent=gene-CYJ00_RS05775;Dbxref=GenBank:WP_014613799.1;Name=WP_014613799.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165214.1;locus_tag=CYJ00_RS05775;product=DEAD/DEAH box helicase;protein_id=WP_014613799.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	6262	7230	.	+	.	ID=gene-CYJ00_RS05780;Name=CYJ00_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05780;old_locus_tag=CYJ00_005785
NZ_PJUS02000208.1	Protein Homology	CDS	6262	7230	.	+	0	ID=cds-WP_014613798.1;Parent=gene-CYJ00_RS05780;Dbxref=GenBank:WP_014613798.1;Name=WP_014613798.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=CYJ00_RS05780;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_014613798.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	7384	8487	.	-	.	ID=gene-CYJ00_RS05785;Name=CYJ00_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05785;old_locus_tag=CYJ00_005790
NZ_PJUS02000208.1	Protein Homology	CDS	7384	8487	.	-	0	ID=cds-WP_037542857.1;Parent=gene-CYJ00_RS05785;Dbxref=GenBank:WP_037542857.1;Name=WP_037542857.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165212.1;locus_tag=CYJ00_RS05785;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_037542857.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	8484	9161	.	-	.	ID=gene-CYJ00_RS05790;Name=CYJ00_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05790;old_locus_tag=CYJ00_005795
NZ_PJUS02000208.1	Protein Homology	CDS	8484	9161	.	-	0	ID=cds-WP_063284402.1;Parent=gene-CYJ00_RS05790;Dbxref=GenBank:WP_063284402.1;Name=WP_063284402.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=CYJ00_RS05790;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_063284402.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	9679	10788	.	-	.	ID=gene-CYJ00_RS05795;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CYJ00_RS05795;old_locus_tag=CYJ00_005800
NZ_PJUS02000208.1	Protein Homology	CDS	9679	10788	.	-	0	ID=cds-WP_014613795.1;Parent=gene-CYJ00_RS05795;Dbxref=GenBank:WP_014613795.1;Name=WP_014613795.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CYJ00_RS05795;product=RNA polymerase sigma factor RpoD;protein_id=WP_014613795.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	10806	12593	.	-	.	ID=gene-CYJ00_RS05800;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CYJ00_RS05800;old_locus_tag=CYJ00_005805
NZ_PJUS02000208.1	Protein Homology	CDS	10806	12593	.	-	0	ID=cds-WP_014613794.1;Parent=gene-CYJ00_RS05800;Dbxref=GenBank:WP_014613794.1;Name=WP_014613794.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729243.1;locus_tag=CYJ00_RS05800;product=DNA primase;protein_id=WP_014613794.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	12666	13493	.	-	.	ID=gene-CYJ00_RS05805;Name=CYJ00_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05805;old_locus_tag=CYJ00_005810
NZ_PJUS02000208.1	Protein Homology	CDS	12666	13493	.	-	0	ID=cds-WP_014613793.1;Parent=gene-CYJ00_RS05805;Dbxref=GenBank:WP_014613793.1;Name=WP_014613793.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=CYJ00_RS05805;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_014613793.1;transl_table=11
NZ_PJUS02000208.1	RefSeq	gene	13508	14128	.	-	.	ID=gene-CYJ00_RS05810;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=CYJ00_RS05810;old_locus_tag=CYJ00_005815
NZ_PJUS02000208.1	Protein Homology	CDS	13508	14128	.	-	0	ID=cds-WP_075773659.1;Parent=gene-CYJ00_RS05810;Dbxref=GenBank:WP_075773659.1;Name=WP_075773659.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724599.1;locus_tag=CYJ00_RS05810;product=transcriptional regulator CcpN;protein_id=WP_075773659.1;transl_table=11
##sequence-region NZ_PJUS02000107.1 1 10196
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000107.1	RefSeq	region	1	10196	.	+	.	ID=NZ_PJUS02000107.1:1..10196;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000107.1	RefSeq	gene	124	648	.	-	.	ID=gene-CYJ00_RS03010;Name=CYJ00_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03010;old_locus_tag=CYJ00_003010
NZ_PJUS02000107.1	Protein Homology	CDS	124	648	.	-	0	ID=cds-WP_014613324.1;Parent=gene-CYJ00_RS03010;Dbxref=GenBank:WP_014613324.1;Name=WP_014613324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613324.1;locus_tag=CYJ00_RS03010;product=DUF2529 family protein;protein_id=WP_014613324.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	913	1785	.	+	.	ID=gene-CYJ00_RS03015;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=CYJ00_RS03015;old_locus_tag=CYJ00_003015
NZ_PJUS02000107.1	Protein Homology	CDS	913	1785	.	+	0	ID=cds-WP_015729446.1;Parent=gene-CYJ00_RS03015;Dbxref=GenBank:WP_015729446.1;Name=WP_015729446.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=CYJ00_RS03015;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_015729446.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	2130	3395	.	+	.	ID=gene-CYJ00_RS03020;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=CYJ00_RS03020;old_locus_tag=CYJ00_003020
NZ_PJUS02000107.1	Protein Homology	CDS	2130	3395	.	+	0	ID=cds-WP_014613326.1;Parent=gene-CYJ00_RS03020;Dbxref=GenBank:WP_014613326.1;Name=WP_014613326.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=CYJ00_RS03020;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_014613326.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	3443	3772	.	+	.	ID=gene-CYJ00_RS03025;Name=CYJ00_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03025;old_locus_tag=CYJ00_003025
NZ_PJUS02000107.1	Protein Homology	CDS	3443	3772	.	+	0	ID=cds-WP_014613327.1;Parent=gene-CYJ00_RS03025;Dbxref=GenBank:WP_014613327.1;Name=WP_014613327.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613327.1;locus_tag=CYJ00_RS03025;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014613327.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	3953	5386	.	+	.	ID=gene-CYJ00_RS03030;Name=CYJ00_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03030;old_locus_tag=CYJ00_003030
NZ_PJUS02000107.1	Protein Homology	CDS	3953	5386	.	+	0	ID=cds-WP_014613328.1;Parent=gene-CYJ00_RS03030;Dbxref=GenBank:WP_014613328.1;Name=WP_014613328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165794.1;locus_tag=CYJ00_RS03030;product=aldehyde dehydrogenase family protein;protein_id=WP_014613328.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	6259	7572	.	+	.	ID=gene-CYJ00_RS03035;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CYJ00_RS03035;old_locus_tag=CYJ00_003040
NZ_PJUS02000107.1	Protein Homology	CDS	6259	7572	.	+	0	ID=cds-WP_014613330.1;Parent=gene-CYJ00_RS03035;Dbxref=GenBank:WP_014613330.1;Name=WP_014613330.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613330.1;locus_tag=CYJ00_RS03035;product=transcription termination factor Rho;protein_id=WP_014613330.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	7695	7949	.	+	.	ID=gene-CYJ00_RS03040;Name=CYJ00_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03040;old_locus_tag=CYJ00_003045
NZ_PJUS02000107.1	Protein Homology	CDS	7695	7949	.	+	0	ID=cds-WP_014613331.1;Parent=gene-CYJ00_RS03040;Dbxref=GenBank:WP_014613331.1;Name=WP_014613331.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=CYJ00_RS03040;product=type B 50S ribosomal protein L31;protein_id=WP_014613331.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	8297	8899	.	+	.	ID=gene-CYJ00_RS03045;Name=CYJ00_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03045;old_locus_tag=CYJ00_003050
NZ_PJUS02000107.1	Protein Homology	CDS	8297	8899	.	+	0	ID=cds-WP_015729444.1;Parent=gene-CYJ00_RS03045;Dbxref=GenBank:WP_015729444.1;Name=WP_015729444.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613332.1;locus_tag=CYJ00_RS03045;product=thymidine kinase;protein_id=WP_015729444.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	gene	8899	9975	.	+	.	ID=gene-CYJ00_RS03050;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03050;old_locus_tag=CYJ00_003055
NZ_PJUS02000107.1	Protein Homology	CDS	8899	9975	.	+	0	ID=cds-WP_015729443.1;Parent=gene-CYJ00_RS03050;Dbxref=GenBank:WP_015729443.1;Name=WP_015729443.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CYJ00_RS03050;product=peptide chain release factor 1;protein_id=WP_015729443.1;transl_table=11
NZ_PJUS02000107.1	RefSeq	pseudogene	9965	10196	.	+	.	ID=gene-CYJ00_RS03055;Name=CYJ00_RS03055;end_range=10196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS03055;old_locus_tag=CYJ00_003060;partial=true;pseudo=true
NZ_PJUS02000107.1	Protein Homology	CDS	9965	10196	.	+	0	ID=cds-CYJ00_RS03055;Parent=gene-CYJ00_RS03055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10196,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=CYJ00_RS03055;partial=true;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PJUS02000424.1 1 9901
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000424.1	RefSeq	region	1	9901	.	+	.	ID=NZ_PJUS02000424.1:1..9901;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000424.1	RefSeq	gene	250	1194	.	-	.	ID=gene-CYJ00_RS12545;Name=CYJ00_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12545;old_locus_tag=CYJ00_012550
NZ_PJUS02000424.1	Protein Homology	CDS	250	1194	.	-	0	ID=cds-WP_015729295.1;Parent=gene-CYJ00_RS12545;Dbxref=GenBank:WP_015729295.1;Name=WP_015729295.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=CYJ00_RS12545;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_015729295.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	1194	2054	.	-	.	ID=gene-CYJ00_RS12550;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CYJ00_RS12550;old_locus_tag=CYJ00_012555
NZ_PJUS02000424.1	Protein Homology	CDS	1194	2054	.	-	0	ID=cds-WP_014613675.1;Parent=gene-CYJ00_RS12550;Dbxref=GenBank:WP_014613675.1;Name=WP_014613675.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500314.1;locus_tag=CYJ00_RS12550;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_014613675.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	2099	3331	.	-	.	ID=gene-CYJ00_RS12555;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=CYJ00_RS12555;old_locus_tag=CYJ00_012560
NZ_PJUS02000424.1	Protein Homology	CDS	2099	3331	.	-	0	ID=cds-WP_014613674.1;Parent=gene-CYJ00_RS12555;Dbxref=GenBank:WP_014613674.1;Name=WP_014613674.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613674.1;locus_tag=CYJ00_RS12555;product=NADP-dependent malic enzyme;protein_id=WP_014613674.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	3474	6665	.	-	.	ID=gene-CYJ00_RS12560;Name=CYJ00_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12560;old_locus_tag=CYJ00_012565
NZ_PJUS02000424.1	Protein Homology	CDS	3474	6665	.	-	0	ID=cds-WP_015729296.1;Parent=gene-CYJ00_RS12560;Dbxref=GenBank:WP_015729296.1;Name=WP_015729296.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=CYJ00_RS12560;product=DNA polymerase III subunit alpha;protein_id=WP_015729296.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	6690	7622	.	-	.	ID=gene-CYJ00_RS12565;Name=CYJ00_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12565;old_locus_tag=CYJ00_012570
NZ_PJUS02000424.1	Protein Homology	CDS	6690	7622	.	-	0	ID=cds-WP_015729297.1;Parent=gene-CYJ00_RS12565;Dbxref=GenBank:WP_015729297.1;Name=WP_015729297.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613672.1;locus_tag=CYJ00_RS12565;product=DHH family phosphoesterase;protein_id=WP_015729297.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	7635	8930	.	-	.	ID=gene-CYJ00_RS12570;Name=CYJ00_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12570;old_locus_tag=CYJ00_012575
NZ_PJUS02000424.1	Protein Homology	CDS	7635	8930	.	-	0	ID=cds-WP_101457799.1;Parent=gene-CYJ00_RS12570;Dbxref=GenBank:WP_101457799.1;Name=WP_101457799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=CYJ00_RS12570;product=DRTGG domain-containing protein;protein_id=WP_101457799.1;transl_table=11
NZ_PJUS02000424.1	RefSeq	gene	9251	9664	.	+	.	ID=gene-CYJ00_RS12575;Name=CYJ00_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS12575;old_locus_tag=CYJ00_012580
NZ_PJUS02000424.1	Protein Homology	CDS	9251	9664	.	+	0	ID=cds-WP_015729298.1;Parent=gene-CYJ00_RS12575;Dbxref=GenBank:WP_015729298.1;Name=WP_015729298.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165097.1;locus_tag=CYJ00_RS12575;product=universal stress protein;protein_id=WP_015729298.1;transl_table=11
##sequence-region NZ_PJUS02000113.1 1 11189
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000113.1	RefSeq	region	1	11189	.	+	.	ID=NZ_PJUS02000113.1:1..11189;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000113.1	RefSeq	gene	87	320	.	-	.	ID=gene-CYJ00_RS03225;Name=CYJ00_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03225;old_locus_tag=CYJ00_003230
NZ_PJUS02000113.1	Protein Homology	CDS	87	320	.	-	0	ID=cds-WP_014614260.1;Parent=gene-CYJ00_RS03225;Dbxref=GenBank:WP_014614260.1;Name=WP_014614260.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165586.1;locus_tag=CYJ00_RS03225;product=glutaredoxin family protein;protein_id=WP_014614260.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	523	1866	.	+	.	ID=gene-CYJ00_RS03230;Name=CYJ00_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03230;old_locus_tag=CYJ00_003235
NZ_PJUS02000113.1	Protein Homology	CDS	523	1866	.	+	0	ID=cds-WP_014614259.1;Parent=gene-CYJ00_RS03230;Dbxref=GenBank:WP_014614259.1;Name=WP_014614259.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614259.1;locus_tag=CYJ00_RS03230;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014614259.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	1866	2885	.	+	.	ID=gene-CYJ00_RS03235;Name=CYJ00_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03235;old_locus_tag=CYJ00_003240
NZ_PJUS02000113.1	Protein Homology	CDS	1866	2885	.	+	0	ID=cds-WP_015728955.1;Parent=gene-CYJ00_RS03235;Dbxref=GenBank:WP_015728955.1;Name=WP_015728955.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=CYJ00_RS03235;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_015728955.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	3034	3693	.	+	.	ID=gene-CYJ00_RS03240;Name=CYJ00_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03240;old_locus_tag=CYJ00_003245
NZ_PJUS02000113.1	Protein Homology	CDS	3034	3693	.	+	0	ID=cds-WP_101457800.1;Parent=gene-CYJ00_RS03240;Dbxref=GenBank:WP_101457800.1;Name=WP_101457800.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=CYJ00_RS03240;product=potassium channel family protein;protein_id=WP_101457800.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	4268	5947	.	-	.	ID=gene-CYJ00_RS03250;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03250;old_locus_tag=CYJ00_003255
NZ_PJUS02000113.1	Protein Homology	CDS	4268	5947	.	-	0	ID=cds-WP_014614255.1;Parent=gene-CYJ00_RS03250;Dbxref=GenBank:WP_014614255.1;Name=WP_014614255.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493055.1;locus_tag=CYJ00_RS03250;product=ribonuclease J1;protein_id=WP_014614255.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	5947	6162	.	-	.	ID=gene-CYJ00_RS03255;Name=CYJ00_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03255;old_locus_tag=CYJ00_003260
NZ_PJUS02000113.1	Protein Homology	CDS	5947	6162	.	-	0	ID=cds-WP_014614254.1;Parent=gene-CYJ00_RS03255;Dbxref=GenBank:WP_014614254.1;Name=WP_014614254.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CYJ00_RS03255;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_014614254.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	6501	6773	.	+	.	ID=gene-CYJ00_RS03260;Name=CYJ00_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03260;old_locus_tag=CYJ00_003265
NZ_PJUS02000113.1	Protein Homology	CDS	6501	6773	.	+	0	ID=cds-WP_014614252.1;Parent=gene-CYJ00_RS03260;Dbxref=GenBank:WP_014614252.1;Name=WP_014614252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=CYJ00_RS03260;product=hypothetical protein;protein_id=WP_014614252.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	7387	7938	.	-	.	ID=gene-CYJ00_RS03265;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CYJ00_RS03265;old_locus_tag=CYJ00_003270
NZ_PJUS02000113.1	Protein Homology	CDS	7387	7938	.	-	0	ID=cds-WP_014614251.1;Parent=gene-CYJ00_RS03265;Dbxref=GenBank:WP_014614251.1;Name=WP_014614251.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=CYJ00_RS03265;product=peptide deformylase;protein_id=WP_014614251.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	8185	8817	.	+	.	ID=gene-CYJ00_RS03270;Name=CYJ00_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03270;old_locus_tag=CYJ00_003275
NZ_PJUS02000113.1	Protein Homology	CDS	8185	8817	.	+	0	ID=cds-WP_015728956.1;Parent=gene-CYJ00_RS03270;Dbxref=GenBank:WP_015728956.1;Name=WP_015728956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=CYJ00_RS03270;product=YkyA family protein;protein_id=WP_015728956.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	8981	10093	.	+	.	ID=gene-CYJ00_RS03275;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03275;old_locus_tag=CYJ00_003280
NZ_PJUS02000113.1	Protein Homology	CDS	8981	10093	.	+	0	ID=cds-WP_014614249.1;Parent=gene-CYJ00_RS03275;Dbxref=GenBank:WP_014614249.1;Name=WP_014614249.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CYJ00_RS03275;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_014614249.1;transl_table=11
NZ_PJUS02000113.1	RefSeq	gene	10097	11074	.	+	.	ID=gene-CYJ00_RS03280;Name=CYJ00_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03280;old_locus_tag=CYJ00_003285
NZ_PJUS02000113.1	Protein Homology	CDS	10097	11074	.	+	0	ID=cds-WP_014614248.1;Parent=gene-CYJ00_RS03280;Dbxref=GenBank:WP_014614248.1;Name=WP_014614248.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CYJ00_RS03280;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014614248.1;transl_table=11
##sequence-region NZ_PJUS02000209.1 1 9290
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000209.1	RefSeq	region	1	9290	.	+	.	ID=NZ_PJUS02000209.1:1..9290;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000209.1	RefSeq	gene	144	539	.	+	.	ID=gene-CYJ00_RS05815;Name=CYJ00_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05815;old_locus_tag=CYJ00_005820
NZ_PJUS02000209.1	Protein Homology	CDS	144	539	.	+	0	ID=cds-WP_000723886.1;Parent=gene-CYJ00_RS05815;Dbxref=GenBank:WP_000723886.1;Name=WP_000723886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023712.1;locus_tag=CYJ00_RS05815;product=conjugal transfer protein;protein_id=WP_000723886.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	523	2976	.	+	.	ID=gene-CYJ00_RS05820;Name=tcpF;gbkey=Gene;gene=tcpF;gene_biotype=protein_coding;locus_tag=CYJ00_RS05820;old_locus_tag=CYJ00_005825
NZ_PJUS02000209.1	Protein Homology	CDS	523	2976	.	+	0	ID=cds-WP_000941001.1;Parent=gene-CYJ00_RS05820;Dbxref=GenBank:WP_000941001.1;Name=WP_000941001.1;gbkey=CDS;gene=tcpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331166.1;locus_tag=CYJ00_RS05820;product=conjugal transfer ATPase TcpF;protein_id=WP_000941001.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	2973	5000	.	+	.	ID=gene-CYJ00_RS05825;Name=CYJ00_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05825;old_locus_tag=CYJ00_005830
NZ_PJUS02000209.1	Protein Homology	CDS	2973	5000	.	+	0	ID=cds-WP_000192390.1;Parent=gene-CYJ00_RS05825;Dbxref=GenBank:WP_000192390.1;Name=WP_000192390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192391.1;locus_tag=CYJ00_RS05825;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_000192390.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	4997	6019	.	+	.	ID=gene-CYJ00_RS05830;Name=CYJ00_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05830;old_locus_tag=CYJ00_005835
NZ_PJUS02000209.1	Protein Homology	CDS	4997	6019	.	+	0	ID=cds-WP_000768374.1;Parent=gene-CYJ00_RS05830;Dbxref=GenBank:WP_000768374.1;Name=WP_000768374.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768374.1;locus_tag=CYJ00_RS05830;product=bifunctional lytic transglycosylase/C40 family peptidase;protein_id=WP_000768374.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	6036	6965	.	+	.	ID=gene-CYJ00_RS05835;Name=CYJ00_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05835;old_locus_tag=CYJ00_005840
NZ_PJUS02000209.1	Protein Homology	CDS	6036	6965	.	+	0	ID=cds-WP_198597682.1;Parent=gene-CYJ00_RS05835;Dbxref=GenBank:WP_198597682.1;Name=WP_198597682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650613.1;locus_tag=CYJ00_RS05835;product=conjugal transfer protein;protein_id=WP_198597682.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	7240	7326	.	+	.	ID=gene-CYJ00_RS05845;Name=CYJ00_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05845;old_locus_tag=CYJ00_005850
NZ_PJUS02000209.1	Protein Homology	CDS	7240	7326	.	+	0	ID=cds-WP_011058339.1;Parent=gene-CYJ00_RS05845;Dbxref=GenBank:WP_011058339.1;Name=WP_011058339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011335.0;locus_tag=CYJ00_RS05845;product=tetracycline resistance determinant leader peptide;protein_id=WP_011058339.1;transl_table=11
NZ_PJUS02000209.1	RefSeq	gene	7342	9261	.	+	.	ID=gene-CYJ00_RS05850;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=CYJ00_RS05850;old_locus_tag=CYJ00_005855
NZ_PJUS02000209.1	Protein Homology	CDS	7342	9261	.	+	0	ID=cds-WP_063284549.1;Parent=gene-CYJ00_RS05850;Dbxref=GenBank:WP_063284549.1;Name=WP_063284549.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=CYJ00_RS05850;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=WP_063284549.1;transl_table=11
##sequence-region NZ_PJUS02000109.1 1 24233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000109.1	RefSeq	region	1	24233	.	+	.	ID=NZ_PJUS02000109.1:1..24233;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000109.1	RefSeq	gene	1	258	.	-	.	ID=gene-CYJ00_RS03085;Name=CYJ00_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03085;old_locus_tag=CYJ00_003090;partial=true;start_range=.,1
NZ_PJUS02000109.1	Protein Homology	CDS	1	258	.	-	0	ID=cds-WP_101457655.1;Parent=gene-CYJ00_RS03085;Dbxref=GenBank:WP_101457655.1;Name=WP_101457655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037832.1;locus_tag=CYJ00_RS03085;partial=true;product=immunoglobulin-like domain-containing protein;protein_id=WP_101457655.1;start_range=.,1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	486	1631	.	+	.	ID=gene-CYJ00_RS03090;Name=CYJ00_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03090;old_locus_tag=CYJ00_003095
NZ_PJUS02000109.1	Protein Homology	CDS	486	1631	.	+	0	ID=cds-WP_014614282.1;Parent=gene-CYJ00_RS03090;Dbxref=GenBank:WP_014614282.1;Name=WP_014614282.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=CYJ00_RS03090;product=globin domain-containing protein;protein_id=WP_014614282.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	1941	2798	.	-	.	ID=gene-CYJ00_RS03095;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CYJ00_RS03095;old_locus_tag=CYJ00_003100
NZ_PJUS02000109.1	Protein Homology	CDS	1941	2798	.	-	0	ID=cds-WP_014614281.1;Parent=gene-CYJ00_RS03095;Dbxref=GenBank:WP_014614281.1;Name=WP_014614281.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=CYJ00_RS03095;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_014614281.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	3008	3490	.	+	.	ID=gene-CYJ00_RS03100;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CYJ00_RS03100;old_locus_tag=CYJ00_003105
NZ_PJUS02000109.1	Protein Homology	CDS	3008	3490	.	+	0	ID=cds-WP_096536155.1;Parent=gene-CYJ00_RS03100;Dbxref=GenBank:WP_096536155.1;Name=WP_096536155.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=CYJ00_RS03100;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_096536155.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	3477	4610	.	+	.	ID=gene-CYJ00_RS03105;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CYJ00_RS03105;old_locus_tag=CYJ00_003110
NZ_PJUS02000109.1	Protein Homology	CDS	3477	4610	.	+	0	ID=cds-WP_233275636.1;Parent=gene-CYJ00_RS03105;Dbxref=GenBank:WP_233275636.1;Name=WP_233275636.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728942.1;locus_tag=CYJ00_RS03105;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_233275636.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	4607	5308	.	+	.	ID=gene-CYJ00_RS03110;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CYJ00_RS03110;old_locus_tag=CYJ00_003115
NZ_PJUS02000109.1	Protein Homology	CDS	4607	5308	.	+	0	ID=cds-WP_014614278.1;Parent=gene-CYJ00_RS03110;Dbxref=GenBank:WP_014614278.1;Name=WP_014614278.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303439.1;locus_tag=CYJ00_RS03110;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014614278.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	5311	5571	.	+	.	ID=gene-CYJ00_RS03115;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=CYJ00_RS03115;old_locus_tag=CYJ00_003120
NZ_PJUS02000109.1	Protein Homology	CDS	5311	5571	.	+	0	ID=cds-WP_014614277.1;Parent=gene-CYJ00_RS03115;Dbxref=GenBank:WP_014614277.1;Name=WP_014614277.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=CYJ00_RS03115;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_014614277.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	5573	6244	.	+	.	ID=gene-CYJ00_RS03120;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=CYJ00_RS03120;old_locus_tag=CYJ00_003125
NZ_PJUS02000109.1	Protein Homology	CDS	5573	6244	.	+	0	ID=cds-WP_014614276.1;Parent=gene-CYJ00_RS03120;Dbxref=GenBank:WP_014614276.1;Name=WP_014614276.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167837.1;locus_tag=CYJ00_RS03120;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_014614276.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	6237	8426	.	+	.	ID=gene-CYJ00_RS03125;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CYJ00_RS03125;old_locus_tag=CYJ00_003130
NZ_PJUS02000109.1	Protein Homology	CDS	6237	8426	.	+	0	ID=cds-WP_014614275.1;Parent=gene-CYJ00_RS03125;Dbxref=GenBank:WP_014614275.1;Name=WP_014614275.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=CYJ00_RS03125;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_014614275.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	8405	9826	.	+	.	ID=gene-CYJ00_RS03130;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CYJ00_RS03130;old_locus_tag=CYJ00_003135
NZ_PJUS02000109.1	Protein Homology	CDS	8405	9826	.	+	0	ID=cds-WP_014614274.1;Parent=gene-CYJ00_RS03130;Dbxref=GenBank:WP_014614274.1;Name=WP_014614274.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=CYJ00_RS03130;product=amidophosphoribosyltransferase;protein_id=WP_014614274.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	9830	10861	.	+	.	ID=gene-CYJ00_RS03135;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CYJ00_RS03135;old_locus_tag=CYJ00_003140
NZ_PJUS02000109.1	Protein Homology	CDS	9830	10861	.	+	0	ID=cds-WP_037543348.1;Parent=gene-CYJ00_RS03135;Dbxref=GenBank:WP_037543348.1;Name=WP_037543348.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276159.1;locus_tag=CYJ00_RS03135;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_037543348.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	10861	11427	.	+	.	ID=gene-CYJ00_RS03140;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CYJ00_RS03140;old_locus_tag=CYJ00_003145
NZ_PJUS02000109.1	Protein Homology	CDS	10861	11427	.	+	0	ID=cds-WP_063284640.1;Parent=gene-CYJ00_RS03140;Dbxref=GenBank:WP_063284640.1;Name=WP_063284640.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=CYJ00_RS03140;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_063284640.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	11444	12922	.	+	.	ID=gene-CYJ00_RS03145;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CYJ00_RS03145;old_locus_tag=CYJ00_003150
NZ_PJUS02000109.1	Protein Homology	CDS	11444	12922	.	+	0	ID=cds-WP_096536151.1;Parent=gene-CYJ00_RS03145;Dbxref=GenBank:WP_096536151.1;Name=WP_096536151.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=CYJ00_RS03145;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_096536151.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	12940	14193	.	+	.	ID=gene-CYJ00_RS03150;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CYJ00_RS03150;old_locus_tag=CYJ00_003155
NZ_PJUS02000109.1	Protein Homology	CDS	12940	14193	.	+	0	ID=cds-WP_096536149.1;Parent=gene-CYJ00_RS03150;Dbxref=GenBank:WP_096536149.1;Name=WP_096536149.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614270.1;locus_tag=CYJ00_RS03150;product=phosphoribosylamine--glycine ligase;protein_id=WP_096536149.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	14412	15203	.	-	.	ID=gene-CYJ00_RS03155;Name=CYJ00_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03155;old_locus_tag=CYJ00_003160
NZ_PJUS02000109.1	Protein Homology	CDS	14412	15203	.	-	0	ID=cds-WP_014614269.1;Parent=gene-CYJ00_RS03155;Dbxref=GenBank:WP_014614269.1;Name=WP_014614269.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=CYJ00_RS03155;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_014614269.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	15200	16603	.	-	.	ID=gene-CYJ00_RS03160;Name=CYJ00_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03160;old_locus_tag=CYJ00_003165
NZ_PJUS02000109.1	Protein Homology	CDS	15200	16603	.	-	0	ID=cds-WP_015728949.1;Parent=gene-CYJ00_RS03160;Dbxref=GenBank:WP_015728949.1;Name=WP_015728949.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=CYJ00_RS03160;product=ABC transporter ATP-binding protein;protein_id=WP_015728949.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	16616	17191	.	-	.	ID=gene-CYJ00_RS03165;Name=CYJ00_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03165;old_locus_tag=CYJ00_003170
NZ_PJUS02000109.1	Protein Homology	CDS	16616	17191	.	-	0	ID=cds-WP_014614267.1;Parent=gene-CYJ00_RS03165;Dbxref=GenBank:WP_014614267.1;Name=WP_014614267.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033477.1;locus_tag=CYJ00_RS03165;product=ECF transporter S component;protein_id=WP_014614267.1;transl_table=11
NZ_PJUS02000109.1	cmsearch	riboswitch	17316	17415	.	-	.	ID=id-NZ_PJUS02000109.1:17316..17415;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUS02000109.1	RefSeq	gene	18259	18390	.	-	.	ID=gene-CYJ00_RS13210;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=CYJ00_RS13210
NZ_PJUS02000109.1	Protein Homology	CDS	18259	18390	.	-	0	ID=cds-WP_014614266.1;Parent=gene-CYJ00_RS13210;Dbxref=GenBank:WP_014614266.1;Name=WP_014614266.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=CYJ00_RS13210;product=glycopeptide resistance-associated protein GraF;protein_id=WP_014614266.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	18756	20087	.	+	.	ID=gene-CYJ00_RS03170;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03170;old_locus_tag=CYJ00_003175
NZ_PJUS02000109.1	Protein Homology	CDS	18756	20087	.	+	0	ID=cds-WP_096536147.1;Parent=gene-CYJ00_RS03170;Dbxref=GenBank:WP_096536147.1;Name=WP_096536147.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728950.1;locus_tag=CYJ00_RS03170;product=lipoteichoic acid stability factor AuxA;protein_id=WP_096536147.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	20223	21392	.	+	.	ID=gene-CYJ00_RS03175;Name=CYJ00_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03175;old_locus_tag=CYJ00_003180
NZ_PJUS02000109.1	Protein Homology	CDS	20223	21392	.	+	0	ID=cds-WP_015728951.1;Parent=gene-CYJ00_RS03175;Dbxref=GenBank:WP_015728951.1;Name=WP_015728951.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165590.1;locus_tag=CYJ00_RS03175;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_015728951.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	21453	21983	.	+	.	ID=gene-CYJ00_RS03180;Name=CYJ00_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03180;old_locus_tag=CYJ00_003185
NZ_PJUS02000109.1	Protein Homology	CDS	21453	21983	.	+	0	ID=cds-WP_014614263.1;Parent=gene-CYJ00_RS03180;Dbxref=GenBank:WP_014614263.1;Name=WP_014614263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=CYJ00_RS03180;product=hypothetical protein;protein_id=WP_014614263.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	22147	22413	.	+	.	ID=gene-CYJ00_RS03185;Name=CYJ00_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03185;old_locus_tag=CYJ00_003190
NZ_PJUS02000109.1	Protein Homology	CDS	22147	22413	.	+	0	ID=cds-WP_015728952.1;Parent=gene-CYJ00_RS03185;Dbxref=GenBank:WP_015728952.1;Name=WP_015728952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=CYJ00_RS03185;product=phosphocarrier protein HPr;protein_id=WP_015728952.1;transl_table=11
NZ_PJUS02000109.1	RefSeq	gene	22413	24134	.	+	.	ID=gene-CYJ00_RS03190;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CYJ00_RS03190;old_locus_tag=CYJ00_003195
NZ_PJUS02000109.1	Protein Homology	CDS	22413	24134	.	+	0	ID=cds-WP_096536145.1;Parent=gene-CYJ00_RS03190;Dbxref=GenBank:WP_096536145.1;Name=WP_096536145.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=CYJ00_RS03190;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_096536145.1;transl_table=11
##sequence-region NZ_PJUS02000122.1 1 8242
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000122.1	RefSeq	region	1	8242	.	+	.	ID=NZ_PJUS02000122.1:1..8242;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000122.1	RefSeq	gene	105	1361	.	+	.	ID=gene-CYJ00_RS03450;Name=CYJ00_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03450;old_locus_tag=CYJ00_003455
NZ_PJUS02000122.1	Protein Homology	CDS	105	1361	.	+	0	ID=cds-WP_101457802.1;Parent=gene-CYJ00_RS03450;Dbxref=GenBank:WP_101457802.1;Name=WP_101457802.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614739.1;locus_tag=CYJ00_RS03450;product=MDR family MFS transporter;protein_id=WP_101457802.1;transl_table=11
NZ_PJUS02000122.1	RefSeq	pseudogene	1547	1990	.	-	.	ID=gene-CYJ00_RS03455;Name=tnpA;end_range=1990,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CYJ00_RS03455;old_locus_tag=CYJ00_003460;partial=true;pseudo=true
NZ_PJUS02000122.1	Protein Homology	CDS	1547	1990	.	-	0	ID=cds-CYJ00_RS03455;Parent=gene-CYJ00_RS03455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1990,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ00_RS03455;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_PJUS02000122.1	RefSeq	gene	2185	3144	.	-	.	ID=gene-CYJ00_RS03460;Name=CYJ00_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03460;old_locus_tag=CYJ00_003465
NZ_PJUS02000122.1	Protein Homology	CDS	2185	3144	.	-	0	ID=cds-WP_014614740.1;Parent=gene-CYJ00_RS03460;Dbxref=GenBank:WP_014614740.1;Name=WP_014614740.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=CYJ00_RS03460;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_014614740.1;transl_table=11
NZ_PJUS02000122.1	RefSeq	gene	3352	4542	.	-	.	ID=gene-CYJ00_RS03465;Name=CYJ00_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03465;old_locus_tag=CYJ00_003470
NZ_PJUS02000122.1	Protein Homology	CDS	3352	4542	.	-	0	ID=cds-WP_065520775.1;Parent=gene-CYJ00_RS03465;Dbxref=GenBank:WP_065520775.1;Name=WP_065520775.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=CYJ00_RS03465;product=glycine C-acetyltransferase;protein_id=WP_065520775.1;transl_table=11
NZ_PJUS02000122.1	RefSeq	gene	4652	5839	.	+	.	ID=gene-CYJ00_RS03470;Name=CYJ00_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03470;old_locus_tag=CYJ00_003475
NZ_PJUS02000122.1	Protein Homology	CDS	4652	5839	.	+	0	ID=cds-WP_101457804.1;Parent=gene-CYJ00_RS03470;Dbxref=GenBank:WP_101457804.1;Name=WP_101457804.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614742.1;locus_tag=CYJ00_RS03470;product=amidohydrolase;protein_id=WP_101457804.1;transl_table=11
NZ_PJUS02000122.1	RefSeq	gene	6425	7129	.	+	.	ID=gene-CYJ00_RS03475;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CYJ00_RS03475;old_locus_tag=CYJ00_003480
NZ_PJUS02000122.1	Protein Homology	CDS	6425	7129	.	+	0	ID=cds-WP_037543937.1;Parent=gene-CYJ00_RS03475;Dbxref=GenBank:WP_037543937.1;Name=WP_037543937.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=CYJ00_RS03475;product=acetolactate decarboxylase;protein_id=WP_037543937.1;transl_table=11
NZ_PJUS02000122.1	RefSeq	gene	7242	8242	.	-	.	ID=gene-CYJ00_RS03480;Name=tuf;end_range=8242,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CYJ00_RS03480;old_locus_tag=CYJ00_003485;partial=true
NZ_PJUS02000122.1	Protein Homology	CDS	7242	8242	.	-	2	ID=cds-WP_101457805.1;Parent=gene-CYJ00_RS03480;Dbxref=GenBank:WP_101457805.1;Name=WP_101457805.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=8242,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166641.1;locus_tag=CYJ00_RS03480;partial=true;product=elongation factor Tu;protein_id=WP_101457805.1;transl_table=11
##sequence-region NZ_PJUS02000009.1 1 6626
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000009.1	RefSeq	region	1	6626	.	+	.	ID=NZ_PJUS02000009.1:1..6626;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000009.1	RefSeq	gene	9	842	.	-	.	ID=gene-CYJ00_RS00325;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CYJ00_RS00325;old_locus_tag=CYJ00_000325
NZ_PJUS02000009.1	Protein Homology	CDS	9	842	.	-	0	ID=cds-WP_099997509.1;Parent=gene-CYJ00_RS00325;Dbxref=GenBank:WP_099997509.1;Name=WP_099997509.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166563.1;locus_tag=CYJ00_RS00325;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_099997509.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	844	1092	.	-	.	ID=gene-CYJ00_RS00330;Name=CYJ00_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00330;old_locus_tag=CYJ00_000330
NZ_PJUS02000009.1	Protein Homology	CDS	844	1092	.	-	0	ID=cds-WP_063279134.1;Parent=gene-CYJ00_RS00330;Dbxref=GenBank:WP_063279134.1;Name=WP_063279134.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276773.1;locus_tag=CYJ00_RS00330;product=GIY-YIG nuclease family protein;protein_id=WP_063279134.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	1085	1810	.	-	.	ID=gene-CYJ00_RS00335;Name=CYJ00_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00335;old_locus_tag=CYJ00_000335
NZ_PJUS02000009.1	Protein Homology	CDS	1085	1810	.	-	0	ID=cds-WP_014614818.1;Parent=gene-CYJ00_RS00335;Dbxref=GenBank:WP_014614818.1;Name=WP_014614818.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=CYJ00_RS00335;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014614818.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	1821	2186	.	-	.	ID=gene-CYJ00_RS00340;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00340;old_locus_tag=CYJ00_000340
NZ_PJUS02000009.1	Protein Homology	CDS	1821	2186	.	-	0	ID=cds-WP_014614819.1;Parent=gene-CYJ00_RS00340;Dbxref=GenBank:WP_014614819.1;Name=WP_014614819.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169136.1;locus_tag=CYJ00_RS00340;product=DNA replication initiation control protein YabA;protein_id=WP_014614819.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	2199	3002	.	-	.	ID=gene-CYJ00_RS00345;Name=CYJ00_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00345;old_locus_tag=CYJ00_000345
NZ_PJUS02000009.1	Protein Homology	CDS	2199	3002	.	-	0	ID=cds-WP_014614820.1;Parent=gene-CYJ00_RS00345;Dbxref=GenBank:WP_014614820.1;Name=WP_014614820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=CYJ00_RS00345;product=PSP1 domain-containing protein;protein_id=WP_014614820.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	3008	3940	.	-	.	ID=gene-CYJ00_RS00350;Name=CYJ00_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00350;old_locus_tag=CYJ00_000350
NZ_PJUS02000009.1	Protein Homology	CDS	3008	3940	.	-	0	ID=cds-WP_099986721.1;Parent=gene-CYJ00_RS00350;Dbxref=GenBank:WP_099986721.1;Name=WP_099986721.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=CYJ00_RS00350;product=DNA polymerase III subunit delta' C-terminal domain-containing protein;protein_id=WP_099986721.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	4186	4515	.	-	.	ID=gene-CYJ00_RS00355;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00355;old_locus_tag=CYJ00_000355
NZ_PJUS02000009.1	Protein Homology	CDS	4186	4515	.	-	0	ID=cds-WP_014614822.1;Parent=gene-CYJ00_RS00355;Dbxref=GenBank:WP_014614822.1;Name=WP_014614822.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CYJ00_RS00355;product=cyclic di-AMP receptor DarA;protein_id=WP_014614822.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	4585	5202	.	-	.	ID=gene-CYJ00_RS00360;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CYJ00_RS00360;old_locus_tag=CYJ00_000360
NZ_PJUS02000009.1	Protein Homology	CDS	4585	5202	.	-	0	ID=cds-WP_063284989.1;Parent=gene-CYJ00_RS00360;Dbxref=GenBank:WP_063284989.1;Name=WP_063284989.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614823.1;locus_tag=CYJ00_RS00360;product=dTMP kinase;protein_id=WP_063284989.1;transl_table=11
NZ_PJUS02000009.1	RefSeq	gene	5205	6545	.	-	.	ID=gene-CYJ00_RS00365;Name=CYJ00_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00365;old_locus_tag=CYJ00_000365
NZ_PJUS02000009.1	Protein Homology	CDS	5205	6545	.	-	0	ID=cds-WP_101457806.1;Parent=gene-CYJ00_RS00365;Dbxref=GenBank:WP_101457806.1;Name=WP_101457806.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644634.1;locus_tag=CYJ00_RS00365;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_101457806.1;transl_table=11
##sequence-region NZ_PJUS02000319.1 1 11516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000319.1	RefSeq	region	1	11516	.	+	.	ID=NZ_PJUS02000319.1:1..11516;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000319.1	RefSeq	gene	1	190	.	+	.	ID=gene-CYJ00_RS13490;Name=CYJ00_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13490;old_locus_tag=CYJ00_008485;partial=true;start_range=.,1
NZ_PJUS02000319.1	GeneMarkS-2+	CDS	1	190	.	+	1	ID=cds-WP_206748200.1;Parent=gene-CYJ00_RS13490;Dbxref=GenBank:WP_206748200.1;Name=WP_206748200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ00_RS13490;partial=true;product=hypothetical protein;protein_id=WP_206748200.1;start_range=.,1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	305	772	.	+	.	ID=gene-CYJ00_RS08485;Name=CYJ00_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08485;old_locus_tag=CYJ00_008490
NZ_PJUS02000319.1	Protein Homology	CDS	305	772	.	+	0	ID=cds-WP_014614478.1;Parent=gene-CYJ00_RS08485;Dbxref=GenBank:WP_014614478.1;Name=WP_014614478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=CYJ00_RS08485;product=hypothetical protein;protein_id=WP_014614478.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	841	1074	.	+	.	ID=gene-CYJ00_RS08490;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CYJ00_RS08490;old_locus_tag=CYJ00_008495
NZ_PJUS02000319.1	Protein Homology	CDS	841	1074	.	+	0	ID=cds-WP_014614477.1;Parent=gene-CYJ00_RS08490;Dbxref=GenBank:WP_014614477.1;Name=WP_014614477.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=CYJ00_RS08490;product=preprotein translocase subunit SecG;protein_id=WP_014614477.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	1173	1913	.	+	.	ID=gene-CYJ00_RS08495;Name=CYJ00_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08495;old_locus_tag=CYJ00_008500
NZ_PJUS02000319.1	Protein Homology	CDS	1173	1913	.	+	0	ID=cds-WP_014614476.1;Parent=gene-CYJ00_RS08495;Dbxref=GenBank:WP_014614476.1;Name=WP_014614476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=CYJ00_RS08495;product=alpha/beta hydrolase;protein_id=WP_014614476.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	1968	4325	.	+	.	ID=gene-CYJ00_RS08500;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CYJ00_RS08500;old_locus_tag=CYJ00_008505
NZ_PJUS02000319.1	Protein Homology	CDS	1968	4325	.	+	0	ID=cds-WP_101457807.1;Parent=gene-CYJ00_RS08500;Dbxref=GenBank:WP_101457807.1;Name=WP_101457807.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CYJ00_RS08500;product=ribonuclease R;protein_id=WP_101457807.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	4341	4805	.	+	.	ID=gene-CYJ00_RS08505;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CYJ00_RS08505;old_locus_tag=CYJ00_008510
NZ_PJUS02000319.1	Protein Homology	CDS	4341	4805	.	+	0	ID=cds-WP_014614474.1;Parent=gene-CYJ00_RS08505;Dbxref=GenBank:WP_014614474.1;Name=WP_014614474.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=CYJ00_RS08505;product=SsrA-binding protein SmpB;protein_id=WP_014614474.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	4879	5238	.	+	.	ID=gene-CYJ00_RS08510;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CYJ00_RS08510;old_locus_tag=CYJ00_008515
NZ_PJUS02000319.1	cmsearch	tmRNA	4879	5238	.	+	.	ID=rna-CYJ00_RS08510;Parent=gene-CYJ00_RS08510;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08510;product=transfer-messenger RNA
NZ_PJUS02000319.1	cmsearch	exon	4879	5238	.	+	.	ID=exon-CYJ00_RS08510-1;Parent=rna-CYJ00_RS08510;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ00_RS08510;product=transfer-messenger RNA
NZ_PJUS02000319.1	RefSeq	gene	5702	6496	.	+	.	ID=gene-CYJ00_RS08515;Name=CYJ00_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08515;old_locus_tag=CYJ00_008520
NZ_PJUS02000319.1	Protein Homology	CDS	5702	6496	.	+	0	ID=cds-WP_065354460.1;Parent=gene-CYJ00_RS08515;Dbxref=GenBank:WP_065354460.1;Name=WP_065354460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614473.1;locus_tag=CYJ00_RS08515;product=exotoxin;protein_id=WP_065354460.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	6690	7481	.	-	.	ID=gene-CYJ00_RS08520;Name=CYJ00_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08520;old_locus_tag=CYJ00_008525
NZ_PJUS02000319.1	Protein Homology	CDS	6690	7481	.	-	0	ID=cds-WP_096548087.1;Parent=gene-CYJ00_RS08520;Dbxref=GenBank:WP_096548087.1;Name=WP_096548087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670134.1;locus_tag=CYJ00_RS08520;product=DUF1828 domain-containing protein;protein_id=WP_096548087.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	7486	7878	.	-	.	ID=gene-CYJ00_RS13955;Name=CYJ00_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS13955;old_locus_tag=CYJ00_008530
NZ_PJUS02000319.1	Protein Homology	CDS	7486	7878	.	-	0	ID=cds-WP_373408328.1;Parent=gene-CYJ00_RS13955;Dbxref=GenBank:WP_373408328.1;Name=WP_373408328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046260.3;locus_tag=CYJ00_RS13955;product=DUF6978 family protein;protein_id=WP_373408328.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	8549	9772	.	+	.	ID=gene-CYJ00_RS08530;Name=CYJ00_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08530;old_locus_tag=CYJ00_008535
NZ_PJUS02000319.1	Protein Homology	CDS	8549	9772	.	+	0	ID=cds-WP_015728783.1;Parent=gene-CYJ00_RS08530;Dbxref=GenBank:WP_015728783.1;Name=WP_015728783.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728783.1;locus_tag=CYJ00_RS08530;product=serine hydrolase domain-containing protein;protein_id=WP_015728783.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	9829	10200	.	-	.	ID=gene-CYJ00_RS08535;Name=CYJ00_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08535;old_locus_tag=CYJ00_008540
NZ_PJUS02000319.1	Protein Homology	CDS	9829	10200	.	-	0	ID=cds-WP_014614464.1;Parent=gene-CYJ00_RS08535;Dbxref=GenBank:WP_014614464.1;Name=WP_014614464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=CYJ00_RS08535;product=DUF1722 domain-containing protein;protein_id=WP_014614464.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	10211	10699	.	-	.	ID=gene-CYJ00_RS08540;Name=CYJ00_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08540;old_locus_tag=CYJ00_008545
NZ_PJUS02000319.1	Protein Homology	CDS	10211	10699	.	-	0	ID=cds-WP_101457808.1;Parent=gene-CYJ00_RS08540;Dbxref=GenBank:WP_101457808.1;Name=WP_101457808.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614463.1;locus_tag=CYJ00_RS08540;product=GNAT family N-acetyltransferase;protein_id=WP_101457808.1;transl_table=11
NZ_PJUS02000319.1	RefSeq	gene	11122	11516	.	-	.	ID=gene-CYJ00_RS08545;Name=CYJ00_RS08545;end_range=11516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS08545;old_locus_tag=CYJ00_008550;partial=true
NZ_PJUS02000319.1	Protein Homology	CDS	11122	11516	.	-	2	ID=cds-WP_101457809.1;Parent=gene-CYJ00_RS08545;Dbxref=GenBank:WP_101457809.1;Name=WP_101457809.1;Ontology_term=GO:0006979,GO:0004601;end_range=11516,.;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166883.1;locus_tag=CYJ00_RS08545;partial=true;product=Ohr family peroxiredoxin;protein_id=WP_101457809.1;transl_table=11
##sequence-region NZ_PJUS02000216.1 1 8692
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000216.1	RefSeq	region	1	8692	.	+	.	ID=NZ_PJUS02000216.1:1..8692;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000216.1	RefSeq	gene	27	917	.	+	.	ID=gene-CYJ00_RS05980;Name=CYJ00_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05980;old_locus_tag=CYJ00_005985
NZ_PJUS02000216.1	Protein Homology	CDS	27	917	.	+	0	ID=cds-WP_014613121.1;Parent=gene-CYJ00_RS05980;Dbxref=GenBank:WP_014613121.1;Name=WP_014613121.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613121.1;locus_tag=CYJ00_RS05980;product=ABC transporter ATP-binding protein;protein_id=WP_014613121.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	919	2163	.	+	.	ID=gene-CYJ00_RS05985;Name=CYJ00_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05985;old_locus_tag=CYJ00_005990
NZ_PJUS02000216.1	Protein Homology	CDS	919	2163	.	+	0	ID=cds-WP_014613122.1;Parent=gene-CYJ00_RS05985;Dbxref=GenBank:WP_014613122.1;Name=WP_014613122.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=CYJ00_RS05985;product=ABC transporter permease;protein_id=WP_014613122.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	2316	2648	.	+	.	ID=gene-CYJ00_RS05990;Name=CYJ00_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05990;old_locus_tag=CYJ00_005995
NZ_PJUS02000216.1	Protein Homology	CDS	2316	2648	.	+	0	ID=cds-WP_015729565.1;Parent=gene-CYJ00_RS05990;Dbxref=GenBank:WP_015729565.1;Name=WP_015729565.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=CYJ00_RS05990;product=YnfA family protein;protein_id=WP_015729565.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	2683	3708	.	+	.	ID=gene-CYJ00_RS05995;Name=CYJ00_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS05995;old_locus_tag=CYJ00_006000
NZ_PJUS02000216.1	Protein Homology	CDS	2683	3708	.	+	0	ID=cds-WP_014613124.1;Parent=gene-CYJ00_RS05995;Dbxref=GenBank:WP_014613124.1;Name=WP_014613124.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613124.1;locus_tag=CYJ00_RS05995;product=aldose epimerase family protein;protein_id=WP_014613124.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	3780	4439	.	-	.	ID=gene-CYJ00_RS06000;Name=CYJ00_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06000;old_locus_tag=CYJ00_006005
NZ_PJUS02000216.1	Protein Homology	CDS	3780	4439	.	-	0	ID=cds-WP_014613125.1;Parent=gene-CYJ00_RS06000;Dbxref=GenBank:WP_014613125.1;Name=WP_014613125.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613125.1;locus_tag=CYJ00_RS06000;product=MOSC domain-containing protein;protein_id=WP_014613125.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	4565	5260	.	+	.	ID=gene-CYJ00_RS06005;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CYJ00_RS06005;old_locus_tag=CYJ00_006010
NZ_PJUS02000216.1	Protein Homology	CDS	4565	5260	.	+	0	ID=cds-WP_014613126.1;Parent=gene-CYJ00_RS06005;Dbxref=GenBank:WP_014613126.1;Name=WP_014613126.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=CYJ00_RS06005;product=ribose 5-phosphate isomerase A;protein_id=WP_014613126.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	5370	6299	.	-	.	ID=gene-CYJ00_RS06010;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CYJ00_RS06010;old_locus_tag=CYJ00_006015
NZ_PJUS02000216.1	Protein Homology	CDS	5370	6299	.	-	0	ID=cds-WP_014613127.1;Parent=gene-CYJ00_RS06010;Dbxref=GenBank:WP_014613127.1;Name=WP_014613127.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=CYJ00_RS06010;product=formimidoylglutamase;protein_id=WP_014613127.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	6705	7589	.	+	.	ID=gene-CYJ00_RS06015;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=CYJ00_RS06015;old_locus_tag=CYJ00_006020
NZ_PJUS02000216.1	Protein Homology	CDS	6705	7589	.	+	0	ID=cds-WP_014613128.1;Parent=gene-CYJ00_RS06015;Dbxref=GenBank:WP_014613128.1;Name=WP_014613128.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167144.1;locus_tag=CYJ00_RS06015;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_014613128.1;transl_table=11
NZ_PJUS02000216.1	RefSeq	gene	7778	8659	.	-	.	ID=gene-CYJ00_RS06020;Name=CYJ00_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06020;old_locus_tag=CYJ00_006025
NZ_PJUS02000216.1	Protein Homology	CDS	7778	8659	.	-	0	ID=cds-WP_037542368.1;Parent=gene-CYJ00_RS06020;Dbxref=GenBank:WP_037542368.1;Name=WP_037542368.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167145.1;locus_tag=CYJ00_RS06020;product=LysR family transcriptional regulator;protein_id=WP_037542368.1;transl_table=11
##sequence-region NZ_PJUS02000100.1 1 9106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000100.1	RefSeq	region	1	9106	.	+	.	ID=NZ_PJUS02000100.1:1..9106;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000100.1	RefSeq	gene	147	1346	.	+	.	ID=gene-CYJ00_RS02795;Name=CYJ00_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02795;old_locus_tag=CYJ00_002795
NZ_PJUS02000100.1	Protein Homology	CDS	147	1346	.	+	0	ID=cds-WP_015728871.1;Parent=gene-CYJ00_RS02795;Dbxref=GenBank:WP_015728871.1;Name=WP_015728871.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728871.1;locus_tag=CYJ00_RS02795;product=ornithine--oxo-acid transaminase;protein_id=WP_015728871.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	1454	2698	.	+	.	ID=gene-CYJ00_RS02800;Name=CYJ00_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02800;old_locus_tag=CYJ00_002800
NZ_PJUS02000100.1	Protein Homology	CDS	1454	2698	.	+	0	ID=cds-WP_014614403.1;Parent=gene-CYJ00_RS02800;Dbxref=GenBank:WP_014614403.1;Name=WP_014614403.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499448.1;locus_tag=CYJ00_RS02800;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_014614403.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	3011	3946	.	-	.	ID=gene-CYJ00_RS02805;Name=CYJ00_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02805;old_locus_tag=CYJ00_002805
NZ_PJUS02000100.1	Protein Homology	CDS	3011	3946	.	-	0	ID=cds-WP_100006779.1;Parent=gene-CYJ00_RS02805;Dbxref=GenBank:WP_100006779.1;Name=WP_100006779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220052.1;locus_tag=CYJ00_RS02805;product=glycerophosphodiester phosphodiesterase;protein_id=WP_100006779.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	4184	5575	.	-	.	ID=gene-CYJ00_RS02810;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CYJ00_RS02810;old_locus_tag=CYJ00_002810
NZ_PJUS02000100.1	Protein Homology	CDS	4184	5575	.	-	0	ID=cds-WP_014614401.1;Parent=gene-CYJ00_RS02810;Dbxref=GenBank:WP_014614401.1;Name=WP_014614401.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220051.1;locus_tag=CYJ00_RS02810;product=argininosuccinate lyase;protein_id=WP_014614401.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	5568	6770	.	-	.	ID=gene-CYJ00_RS02815;Name=CYJ00_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02815;old_locus_tag=CYJ00_002815
NZ_PJUS02000100.1	Protein Homology	CDS	5568	6770	.	-	0	ID=cds-WP_014614400.1;Parent=gene-CYJ00_RS02815;Dbxref=GenBank:WP_014614400.1;Name=WP_014614400.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614400.1;locus_tag=CYJ00_RS02815;product=argininosuccinate synthase;protein_id=WP_014614400.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	6963	8294	.	+	.	ID=gene-CYJ00_RS02820;Name=CYJ00_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS02820;old_locus_tag=CYJ00_002820
NZ_PJUS02000100.1	Protein Homology	CDS	6963	8294	.	+	0	ID=cds-WP_014614399.1;Parent=gene-CYJ00_RS02820;Dbxref=GenBank:WP_014614399.1;Name=WP_014614399.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CYJ00_RS02820;product=glucose-6-phosphate isomerase;protein_id=WP_014614399.1;transl_table=11
NZ_PJUS02000100.1	RefSeq	gene	8538	9056	.	+	.	ID=gene-CYJ00_RS02825;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ00_RS02825;old_locus_tag=CYJ00_002825
NZ_PJUS02000100.1	Protein Homology	CDS	8538	9056	.	+	0	ID=cds-WP_172425806.1;Parent=gene-CYJ00_RS02825;Dbxref=GenBank:WP_172425806.1;Name=WP_172425806.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424627.1;locus_tag=CYJ00_RS02825;product=signal peptidase I;protein_id=WP_172425806.1;transl_table=11
##sequence-region NZ_PJUS02000019.1 1 8714
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000019.1	RefSeq	region	1	8714	.	+	.	ID=NZ_PJUS02000019.1:1..8714;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000019.1	RefSeq	pseudogene	1	389	.	-	.	ID=gene-CYJ00_RS00540;Name=CYJ00_RS00540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS00540;old_locus_tag=CYJ00_000540;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000019.1	Protein Homology	CDS	1	389	.	-	0	ID=cds-CYJ00_RS00540;Parent=gene-CYJ00_RS00540;Note=catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=CYJ00_RS00540;partial=true;product=type II pantothenate kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000019.1	RefSeq	gene	1444	3036	.	-	.	ID=gene-CYJ00_RS00545;Name=CYJ00_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00545;old_locus_tag=CYJ00_000545
NZ_PJUS02000019.1	Protein Homology	CDS	1444	3036	.	-	0	ID=cds-WP_014613317.1;Parent=gene-CYJ00_RS00545;Dbxref=GenBank:WP_014613317.1;Name=WP_014613317.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=CYJ00_RS00545;product=BCCT family transporter;protein_id=WP_014613317.1;transl_table=11
NZ_PJUS02000019.1	RefSeq	gene	3207	4070	.	+	.	ID=gene-CYJ00_RS00550;Name=CYJ00_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00550;old_locus_tag=CYJ00_000550
NZ_PJUS02000019.1	Protein Homology	CDS	3207	4070	.	+	0	ID=cds-WP_014613318.1;Parent=gene-CYJ00_RS00550;Dbxref=GenBank:WP_014613318.1;Name=WP_014613318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165785.1;locus_tag=CYJ00_RS00550;product=GNAT family N-acetyltransferase;protein_id=WP_014613318.1;transl_table=11
NZ_PJUS02000019.1	RefSeq	gene	4339	4881	.	+	.	ID=gene-CYJ00_RS00555;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CYJ00_RS00555;old_locus_tag=CYJ00_000555
NZ_PJUS02000019.1	Protein Homology	CDS	4339	4881	.	+	0	ID=cds-WP_014613320.1;Parent=gene-CYJ00_RS00555;Dbxref=GenBank:WP_014613320.1;Name=WP_014613320.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=CYJ00_RS00555;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_014613320.1;transl_table=11
NZ_PJUS02000019.1	RefSeq	gene	5292	6905	.	+	.	ID=gene-CYJ00_RS00560;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CYJ00_RS00560;old_locus_tag=CYJ00_000560
NZ_PJUS02000019.1	Protein Homology	CDS	5292	6905	.	+	0	ID=cds-WP_014613321.1;Parent=gene-CYJ00_RS00560;Dbxref=GenBank:WP_014613321.1;Name=WP_014613321.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613321.1;locus_tag=CYJ00_RS00560;product=CTP synthase;protein_id=WP_014613321.1;transl_table=11
NZ_PJUS02000019.1	RefSeq	gene	7348	8706	.	+	.	ID=gene-CYJ00_RS00565;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CYJ00_RS00565;old_locus_tag=CYJ00_000565
NZ_PJUS02000019.1	Protein Homology	CDS	7348	8706	.	+	0	ID=cds-WP_065354115.1;Parent=gene-CYJ00_RS00565;Dbxref=GenBank:WP_065354115.1;Name=WP_065354115.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613322.1;locus_tag=CYJ00_RS00565;product=glycerol-3-phosphate transporter;protein_id=WP_065354115.1;transl_table=11
##sequence-region NZ_PJUS02000151.1 1 5746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000151.1	RefSeq	region	1	5746	.	+	.	ID=NZ_PJUS02000151.1:1..5746;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000151.1	RefSeq	pseudogene	1	493	.	+	.	ID=gene-CYJ00_RS13840;Name=CYJ00_RS13840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ00_RS13840;old_locus_tag=CYJ00_004260;partial=true;pseudo=true;start_range=.,1
NZ_PJUS02000151.1	Protein Homology	CDS	1	493	.	+	0	ID=cds-CYJ00_RS13840;Parent=gene-CYJ00_RS13840;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ00_RS13840;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUS02000151.1	RefSeq	gene	571	5271	.	-	.	ID=gene-CYJ00_RS04260;Name=spsG;gbkey=Gene;gene=spsG;gene_biotype=protein_coding;locus_tag=CYJ00_RS04260;old_locus_tag=CYJ00_004265
NZ_PJUS02000151.1	Protein Homology	CDS	571	5271	.	-	0	ID=cds-WP_101457810.1;Parent=gene-CYJ00_RS04260;Dbxref=GenBank:WP_101457810.1;Name=WP_101457810.1;gbkey=CDS;gene=spsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612754.1;locus_tag=CYJ00_RS04260;product=LPXTG-anchored putative endo-alpha-N-acetylgalactosaminidase SpsG;protein_id=WP_101457810.1;transl_table=11
##sequence-region NZ_PJUS02000147.1 1 8917
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000147.1	RefSeq	region	1	8917	.	+	.	ID=NZ_PJUS02000147.1:1..8917;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000147.1	RefSeq	gene	446	2011	.	+	.	ID=gene-CYJ00_RS03995;Name=CYJ00_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS03995;old_locus_tag=CYJ00_004000
NZ_PJUS02000147.1	Protein Homology	CDS	446	2011	.	+	0	ID=cds-WP_096536373.1;Parent=gene-CYJ00_RS03995;Dbxref=GenBank:WP_096536373.1;Name=WP_096536373.1;Ontology_term=GO:0009401,GO:0015797,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274564.1;locus_tag=CYJ00_RS03995;product=PTS mannitol transporter subunit IIBC;protein_id=WP_096536373.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	2042	4072	.	+	.	ID=gene-CYJ00_RS04000;Name=CYJ00_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04000;old_locus_tag=CYJ00_004005
NZ_PJUS02000147.1	Protein Homology	CDS	2042	4072	.	+	0	ID=cds-WP_065520408.1;Parent=gene-CYJ00_RS04000;Dbxref=GenBank:WP_065520408.1;Name=WP_065520408.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220323.1;locus_tag=CYJ00_RS04000;product=BglG family transcription antiterminator;protein_id=WP_065520408.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	4089	4523	.	+	.	ID=gene-CYJ00_RS04005;Name=CYJ00_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04005;old_locus_tag=CYJ00_004010
NZ_PJUS02000147.1	Protein Homology	CDS	4089	4523	.	+	0	ID=cds-WP_015729468.1;Parent=gene-CYJ00_RS04005;Dbxref=GenBank:WP_015729468.1;Name=WP_015729468.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729468.1;locus_tag=CYJ00_RS04005;product=PTS mannitol transporter subunit IIA;protein_id=WP_015729468.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	4523	5629	.	+	.	ID=gene-CYJ00_RS04010;Name=CYJ00_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04010;old_locus_tag=CYJ00_004015
NZ_PJUS02000147.1	Protein Homology	CDS	4523	5629	.	+	0	ID=cds-WP_020220321.1;Parent=gene-CYJ00_RS04010;Dbxref=GenBank:WP_020220321.1;Name=WP_020220321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648742.1;locus_tag=CYJ00_RS04010;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_020220321.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	5753	7108	.	-	.	ID=gene-CYJ00_RS04015;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CYJ00_RS04015;old_locus_tag=CYJ00_004020
NZ_PJUS02000147.1	Protein Homology	CDS	5753	7108	.	-	0	ID=cds-WP_014613289.1;Parent=gene-CYJ00_RS04015;Dbxref=GenBank:WP_014613289.1;Name=WP_014613289.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613289.1;locus_tag=CYJ00_RS04015;product=phosphoglucosamine mutase;protein_id=WP_014613289.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	7136	8068	.	-	.	ID=gene-CYJ00_RS04020;Name=CYJ00_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS04020;old_locus_tag=CYJ00_004025
NZ_PJUS02000147.1	Protein Homology	CDS	7136	8068	.	-	0	ID=cds-WP_101457811.1;Parent=gene-CYJ00_RS04020;Dbxref=GenBank:WP_101457811.1;Name=WP_101457811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=CYJ00_RS04020;product=CdaR family protein;protein_id=WP_101457811.1;transl_table=11
NZ_PJUS02000147.1	RefSeq	gene	8069	8875	.	-	.	ID=gene-CYJ00_RS04025;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=CYJ00_RS04025;old_locus_tag=CYJ00_004030
NZ_PJUS02000147.1	Protein Homology	CDS	8069	8875	.	-	0	ID=cds-WP_014613287.1;Parent=gene-CYJ00_RS04025;Dbxref=GenBank:WP_014613287.1;Name=WP_014613287.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168352.1;locus_tag=CYJ00_RS04025;product=diadenylate cyclase CdaA;protein_id=WP_014613287.1;transl_table=11
##sequence-region NZ_PJUS02000025.1 1 10865
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000025.1	RefSeq	region	1	10865	.	+	.	ID=NZ_PJUS02000025.1:1..10865;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000025.1	RefSeq	gene	46	882	.	+	.	ID=gene-CYJ00_RS00675;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00675;old_locus_tag=CYJ00_000675
NZ_PJUS02000025.1	Protein Homology	CDS	46	882	.	+	0	ID=cds-WP_100006543.1;Parent=gene-CYJ00_RS00675;Dbxref=GenBank:WP_100006543.1;Name=WP_100006543.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=CYJ00_RS00675;product=rod shape-determining protein MreC;protein_id=WP_100006543.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	882	1397	.	+	.	ID=gene-CYJ00_RS00680;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CYJ00_RS00680;old_locus_tag=CYJ00_000680
NZ_PJUS02000025.1	Protein Homology	CDS	882	1397	.	+	0	ID=cds-WP_015729271.1;Parent=gene-CYJ00_RS00680;Dbxref=GenBank:WP_015729271.1;Name=WP_015729271.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729271.1;locus_tag=CYJ00_RS00680;product=rod shape-determining protein MreD;protein_id=WP_015729271.1;transl_table=11
NZ_PJUS02000025.1	cmsearch	sequence_feature	1433	1506	.	+	.	ID=id-NZ_PJUS02000025.1:1433..1506;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUS02000025.1	RefSeq	gene	1518	1826	.	+	.	ID=gene-CYJ00_RS00685;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CYJ00_RS00685;old_locus_tag=CYJ00_000685
NZ_PJUS02000025.1	Protein Homology	CDS	1518	1826	.	+	0	ID=cds-WP_014613714.1;Parent=gene-CYJ00_RS00685;Dbxref=GenBank:WP_014613714.1;Name=WP_014613714.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CYJ00_RS00685;product=50S ribosomal protein L21;protein_id=WP_014613714.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	1829	2149	.	+	.	ID=gene-CYJ00_RS00690;Name=CYJ00_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00690;old_locus_tag=CYJ00_000690
NZ_PJUS02000025.1	Protein Homology	CDS	1829	2149	.	+	0	ID=cds-WP_014613715.1;Parent=gene-CYJ00_RS00690;Dbxref=GenBank:WP_014613715.1;Name=WP_014613715.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CYJ00_RS00690;product=ribosomal-processing cysteine protease Prp;protein_id=WP_014613715.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	2160	2444	.	+	.	ID=gene-CYJ00_RS00695;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00695;old_locus_tag=CYJ00_000695
NZ_PJUS02000025.1	Protein Homology	CDS	2160	2444	.	+	0	ID=cds-WP_014613716.1;Parent=gene-CYJ00_RS00695;Dbxref=GenBank:WP_014613716.1;Name=WP_014613716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CYJ00_RS00695;product=50S ribosomal protein L27;protein_id=WP_014613716.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	2573	3865	.	+	.	ID=gene-CYJ00_RS00700;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CYJ00_RS00700;old_locus_tag=CYJ00_000700
NZ_PJUS02000025.1	Protein Homology	CDS	2573	3865	.	+	0	ID=cds-WP_037542834.1;Parent=gene-CYJ00_RS00700;Dbxref=GenBank:WP_037542834.1;Name=WP_037542834.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CYJ00_RS00700;product=GTPase ObgE;protein_id=WP_037542834.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	3893	4336	.	+	.	ID=gene-CYJ00_RS00705;Name=CYJ00_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS00705;old_locus_tag=CYJ00_000705
NZ_PJUS02000025.1	Protein Homology	CDS	3893	4336	.	+	0	ID=cds-WP_014613718.1;Parent=gene-CYJ00_RS00705;Dbxref=GenBank:WP_014613718.1;Name=WP_014613718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=CYJ00_RS00705;product=ACT domain-containing protein;protein_id=WP_014613718.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	4350	4949	.	+	.	ID=gene-CYJ00_RS00710;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00710;old_locus_tag=CYJ00_000710
NZ_PJUS02000025.1	Protein Homology	CDS	4350	4949	.	+	0	ID=cds-WP_101457812.1;Parent=gene-CYJ00_RS00710;Dbxref=GenBank:WP_101457812.1;Name=WP_101457812.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=CYJ00_RS00710;product=Holliday junction branch migration protein RuvA;protein_id=WP_101457812.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	4963	5961	.	+	.	ID=gene-CYJ00_RS00715;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CYJ00_RS00715;old_locus_tag=CYJ00_000715
NZ_PJUS02000025.1	Protein Homology	CDS	4963	5961	.	+	0	ID=cds-WP_101457813.1;Parent=gene-CYJ00_RS00715;Dbxref=GenBank:WP_101457813.1;Name=WP_101457813.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=CYJ00_RS00715;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_101457813.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	5979	7004	.	+	.	ID=gene-CYJ00_RS00720;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CYJ00_RS00720;old_locus_tag=CYJ00_000720
NZ_PJUS02000025.1	Protein Homology	CDS	5979	7004	.	+	0	ID=cds-WP_037542836.1;Parent=gene-CYJ00_RS00720;Dbxref=GenBank:WP_037542836.1;Name=WP_037542836.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CYJ00_RS00720;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037542836.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	7022	8161	.	+	.	ID=gene-CYJ00_RS00725;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CYJ00_RS00725;old_locus_tag=CYJ00_000725
NZ_PJUS02000025.1	Protein Homology	CDS	7022	8161	.	+	0	ID=cds-WP_014613722.1;Parent=gene-CYJ00_RS00725;Dbxref=GenBank:WP_014613722.1;Name=WP_014613722.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CYJ00_RS00725;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_014613722.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	8178	8441	.	+	.	ID=gene-CYJ00_RS00730;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CYJ00_RS00730;old_locus_tag=CYJ00_000730
NZ_PJUS02000025.1	Protein Homology	CDS	8178	8441	.	+	0	ID=cds-WP_014613723.1;Parent=gene-CYJ00_RS00730;Dbxref=GenBank:WP_014613723.1;Name=WP_014613723.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=CYJ00_RS00730;product=preprotein translocase subunit YajC;protein_id=WP_014613723.1;transl_table=11
NZ_PJUS02000025.1	RefSeq	gene	8583	10862	.	+	.	ID=gene-CYJ00_RS00735;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=CYJ00_RS00735;old_locus_tag=CYJ00_000735
NZ_PJUS02000025.1	Protein Homology	CDS	8583	10862	.	+	0	ID=cds-WP_014613724.1;Parent=gene-CYJ00_RS00735;Dbxref=GenBank:WP_014613724.1;Name=WP_014613724.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491144.1;locus_tag=CYJ00_RS00735;product=protein translocase subunit SecDF;protein_id=WP_014613724.1;transl_table=11
##sequence-region NZ_PJUS02000240.1 1 8331
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUS02000240.1	RefSeq	region	1	8331	.	+	.	ID=NZ_PJUS02000240.1:1..8331;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=112N
NZ_PJUS02000240.1	RefSeq	gene	155	2248	.	+	.	ID=gene-CYJ00_RS06615;Name=CYJ00_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06615;old_locus_tag=CYJ00_006620
NZ_PJUS02000240.1	Protein Homology	CDS	155	2248	.	+	0	ID=cds-WP_015729596.1;Parent=gene-CYJ00_RS06615;Dbxref=GenBank:WP_015729596.1;Name=WP_015729596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613072.1;locus_tag=CYJ00_RS06615;product=helix-turn-helix domain-containing protein;protein_id=WP_015729596.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	2334	3527	.	-	.	ID=gene-CYJ00_RS06620;Name=CYJ00_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06620;old_locus_tag=CYJ00_006625
NZ_PJUS02000240.1	Protein Homology	CDS	2334	3527	.	-	0	ID=cds-WP_014613071.1;Parent=gene-CYJ00_RS06620;Dbxref=GenBank:WP_014613071.1;Name=WP_014613071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=CYJ00_RS06620;product=CynX/NimT family MFS transporter;protein_id=WP_014613071.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	3811	4146	.	+	.	ID=gene-CYJ00_RS06625;Name=CYJ00_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06625;old_locus_tag=CYJ00_006630
NZ_PJUS02000240.1	Protein Homology	CDS	3811	4146	.	+	0	ID=cds-WP_014613070.1;Parent=gene-CYJ00_RS06625;Dbxref=GenBank:WP_014613070.1;Name=WP_014613070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613070.1;locus_tag=CYJ00_RS06625;product=DUF4889 domain-containing protein;protein_id=WP_014613070.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	4501	5406	.	-	.	ID=gene-CYJ00_RS06630;Name=CYJ00_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06630;old_locus_tag=CYJ00_006635
NZ_PJUS02000240.1	Protein Homology	CDS	4501	5406	.	-	0	ID=cds-WP_014613069.1;Parent=gene-CYJ00_RS06630;Dbxref=GenBank:WP_014613069.1;Name=WP_014613069.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613069.1;locus_tag=CYJ00_RS06630;product=DMT family transporter;protein_id=WP_014613069.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	5578	6651	.	-	.	ID=gene-CYJ00_RS06635;Name=CYJ00_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06635;old_locus_tag=CYJ00_006640
NZ_PJUS02000240.1	Protein Homology	CDS	5578	6651	.	-	0	ID=cds-WP_037542326.1;Parent=gene-CYJ00_RS06635;Dbxref=GenBank:WP_037542326.1;Name=WP_037542326.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=CYJ00_RS06635;product=M42 family metallopeptidase;protein_id=WP_037542326.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	6832	7779	.	+	.	ID=gene-CYJ00_RS06640;Name=CYJ00_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06640;old_locus_tag=CYJ00_006645
NZ_PJUS02000240.1	Protein Homology	CDS	6832	7779	.	+	0	ID=cds-WP_014613067.1;Parent=gene-CYJ00_RS06640;Dbxref=GenBank:WP_014613067.1;Name=WP_014613067.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613067.1;locus_tag=CYJ00_RS06640;product=lactate/malate family dehydrogenase;protein_id=WP_014613067.1;transl_table=11
NZ_PJUS02000240.1	RefSeq	gene	7947	8303	.	-	.	ID=gene-CYJ00_RS06645;Name=CYJ00_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ00_RS06645;old_locus_tag=CYJ00_006650
NZ_PJUS02000240.1	Protein Homology	CDS	7947	8303	.	-	0	ID=cds-WP_014613066.1;Parent=gene-CYJ00_RS06645;Dbxref=GenBank:WP_014613066.1;Name=WP_014613066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=CYJ00_RS06645;product=DUF3139 domain-containing protein;protein_id=WP_014613066.1;transl_table=11
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