##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM284717v1 #!genome-build-accession NCBI_Assembly:GCF_002847175.1 #!annotation-date 03/03/2026 10:29:25 #!annotation-source NCBI RefSeq GCF_002847175.1-RS_2026_03_03 ##sequence-region NZ_PJUQ01000001.1 1 220057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000001.1 RefSeq region 1 220057 . + . ID=NZ_PJUQ01000001.1:1..220057;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000001.1 RefSeq gene 397 2061 . - . ID=gene-CYJ02_RS00005;Name=CYJ02_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00005;old_locus_tag=CYJ02_00005 NZ_PJUQ01000001.1 Protein Homology CDS 397 2061 . - 0 ID=cds-WP_020220047.1;Parent=gene-CYJ02_RS00005;Dbxref=GenBank:WP_020220047.1;Name=WP_020220047.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=CYJ02_RS00005;product=peptide ABC transporter substrate-binding protein;protein_id=WP_020220047.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 2084 3025 . - . ID=gene-CYJ02_RS00010;Name=CYJ02_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00010;old_locus_tag=CYJ02_00010 NZ_PJUQ01000001.1 Protein Homology CDS 2084 3025 . - 0 ID=cds-WP_037543504.1;Parent=gene-CYJ02_RS00010;Dbxref=GenBank:WP_037543504.1;Name=WP_037543504.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614377.1;locus_tag=CYJ02_RS00010;product=ABC transporter ATP-binding protein;protein_id=WP_037543504.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 3018 4097 . - . ID=gene-CYJ02_RS00015;Name=CYJ02_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00015;old_locus_tag=CYJ02_00015 NZ_PJUQ01000001.1 Protein Homology CDS 3018 4097 . - 0 ID=cds-WP_014614378.1;Parent=gene-CYJ02_RS00015;Dbxref=GenBank:WP_014614378.1;Name=WP_014614378.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614378.1;locus_tag=CYJ02_RS00015;product=ABC transporter ATP-binding protein;protein_id=WP_014614378.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 4112 5173 . - . ID=gene-CYJ02_RS00020;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=CYJ02_RS00020;old_locus_tag=CYJ02_00020 NZ_PJUQ01000001.1 Protein Homology CDS 4112 5173 . - 0 ID=cds-WP_020220060.1;Parent=gene-CYJ02_RS00020;Dbxref=GenBank:WP_020220060.1;Name=WP_020220060.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=CYJ02_RS00020;product=oligopeptide ABC transporter permease;protein_id=WP_020220060.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 5173 6099 . - . ID=gene-CYJ02_RS00025;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=CYJ02_RS00025;old_locus_tag=CYJ02_00025 NZ_PJUQ01000001.1 Protein Homology CDS 5173 6099 . - 0 ID=cds-WP_014614380.1;Parent=gene-CYJ02_RS00025;Dbxref=GenBank:WP_014614380.1;Name=WP_014614380.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CYJ02_RS00025;product=oligopeptide ABC transporter permease;protein_id=WP_014614380.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 6345 6722 . + . ID=gene-CYJ02_RS00030;Name=CYJ02_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00030;old_locus_tag=CYJ02_00030 NZ_PJUQ01000001.1 Protein Homology CDS 6345 6722 . + 0 ID=cds-WP_014614381.1;Parent=gene-CYJ02_RS00030;Dbxref=GenBank:WP_014614381.1;Name=WP_014614381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614381.1;locus_tag=CYJ02_RS00030;product=DUF3899 domain-containing protein;protein_id=WP_014614381.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 7201 8445 . - . ID=gene-CYJ02_RS00035;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CYJ02_RS00035;old_locus_tag=CYJ02_00035 NZ_PJUQ01000001.1 Protein Homology CDS 7201 8445 . - 0 ID=cds-WP_015728877.1;Parent=gene-CYJ02_RS00035;Dbxref=GenBank:WP_015728877.1;Name=WP_015728877.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=CYJ02_RS00035;product=beta-ketoacyl-ACP synthase II;protein_id=WP_015728877.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 8464 9405 . - . ID=gene-CYJ02_RS00040;Name=CYJ02_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00040;old_locus_tag=CYJ02_00040 NZ_PJUQ01000001.1 Protein Homology CDS 8464 9405 . - 0 ID=cds-WP_014614383.1;Parent=gene-CYJ02_RS00040;Dbxref=GenBank:WP_014614383.1;Name=WP_014614383.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CYJ02_RS00040;product=beta-ketoacyl-ACP synthase III;protein_id=WP_014614383.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 9555 9752 . + . ID=gene-CYJ02_RS00045;Name=CYJ02_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00045;old_locus_tag=CYJ02_00045 NZ_PJUQ01000001.1 Protein Homology CDS 9555 9752 . + 0 ID=cds-WP_014614384.1;Parent=gene-CYJ02_RS00045;Dbxref=GenBank:WP_014614384.1;Name=WP_014614384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614384.1;locus_tag=CYJ02_RS00045;product=DUF2929 family protein;protein_id=WP_014614384.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 9903 10808 . - . ID=gene-CYJ02_RS00050;Name=CYJ02_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00050;old_locus_tag=CYJ02_00050 NZ_PJUQ01000001.1 Protein Homology CDS 9903 10808 . - 0 ID=cds-WP_014614385.1;Parent=gene-CYJ02_RS00050;Dbxref=GenBank:WP_014614385.1;Name=WP_014614385.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614385.1;locus_tag=CYJ02_RS00050;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_014614385.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 11176 13797 . - . ID=gene-CYJ02_RS00055;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00055;old_locus_tag=CYJ02_00055 NZ_PJUQ01000001.1 Protein Homology CDS 11176 13797 . - 0 ID=cds-WP_101431208.1;Parent=gene-CYJ02_RS00055;Dbxref=GenBank:WP_101431208.1;Name=WP_101431208.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166000.1;locus_tag=CYJ02_RS00055;product=ATP-dependent chaperone ClpB;protein_id=WP_101431208.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq pseudogene 14075 14248 . + . ID=gene-CYJ02_RS12635;Name=CYJ02_RS12635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12635;old_locus_tag=CYJ02_00060;partial=true;pseudo=true;start_range=.,14075 NZ_PJUQ01000001.1 Protein Homology CDS 14075 14248 . + 0 ID=cds-CYJ02_RS12635;Parent=gene-CYJ02_RS12635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ02_RS12635;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,14075;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 14423 15538 . - . ID=gene-CYJ02_RS00065;Name=CYJ02_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00065;old_locus_tag=CYJ02_00065 NZ_PJUQ01000001.1 Protein Homology CDS 14423 15538 . - 0 ID=cds-WP_014614516.1;Parent=gene-CYJ02_RS00065;Dbxref=GenBank:WP_014614516.1;Name=WP_014614516.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166128.1;locus_tag=CYJ02_RS00065;product=glycerate kinase;protein_id=WP_014614516.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 15893 16213 . - . ID=gene-CYJ02_RS00070;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS00070;old_locus_tag=CYJ02_00070 NZ_PJUQ01000001.1 Protein Homology CDS 15893 16213 . - 0 ID=cds-WP_014614517.1;Parent=gene-CYJ02_RS00070;Dbxref=GenBank:WP_014614517.1;Name=WP_014614517.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=CYJ02_RS00070;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_014614517.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 16378 17271 . - . ID=gene-CYJ02_RS00075;Name=CYJ02_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00075;old_locus_tag=CYJ02_00075 NZ_PJUQ01000001.1 Protein Homology CDS 16378 17271 . - 0 ID=cds-WP_014614518.1;Parent=gene-CYJ02_RS00075;Dbxref=GenBank:WP_014614518.1;Name=WP_014614518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614518.1;locus_tag=CYJ02_RS00075;product=EMYY motif lipoprotein;protein_id=WP_014614518.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 17382 17900 . + . ID=gene-CYJ02_RS00080;Name=CYJ02_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00080;old_locus_tag=CYJ02_00080 NZ_PJUQ01000001.1 Protein Homology CDS 17382 17900 . + 0 ID=cds-WP_101431209.1;Parent=gene-CYJ02_RS00080;Dbxref=GenBank:WP_101431209.1;Name=WP_101431209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168519.1;locus_tag=CYJ02_RS00080;product=GrpB family protein;protein_id=WP_101431209.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 18045 18974 . + . ID=gene-CYJ02_RS00085;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00085;old_locus_tag=CYJ02_00085 NZ_PJUQ01000001.1 Protein Homology CDS 18045 18974 . + 0 ID=cds-WP_020219843.1;Parent=gene-CYJ02_RS00085;Dbxref=GenBank:WP_020219843.1;Name=WP_020219843.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219843.1;locus_tag=CYJ02_RS00085;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_020219843.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 18999 19313 . + . ID=gene-CYJ02_RS00090;Name=CYJ02_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00090;old_locus_tag=CYJ02_00090 NZ_PJUQ01000001.1 Protein Homology CDS 18999 19313 . + 0 ID=cds-WP_014614521.1;Parent=gene-CYJ02_RS00090;Dbxref=GenBank:WP_014614521.1;Name=WP_014614521.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614521.1;locus_tag=CYJ02_RS00090;product=CHY zinc finger protein;protein_id=WP_014614521.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 19695 20657 . - . ID=gene-CYJ02_RS00095;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CYJ02_RS00095;old_locus_tag=CYJ02_00095 NZ_PJUQ01000001.1 Protein Homology CDS 19695 20657 . - 0 ID=cds-WP_014614522.1;Parent=gene-CYJ02_RS00095;Dbxref=GenBank:WP_014614522.1;Name=WP_014614522.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166133.1;locus_tag=CYJ02_RS00095;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_014614522.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 20885 22990 . - . ID=gene-CYJ02_RS00100;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CYJ02_RS00100;old_locus_tag=CYJ02_00100 NZ_PJUQ01000001.1 Protein Homology CDS 20885 22990 . - 0 ID=cds-WP_014614523.1;Parent=gene-CYJ02_RS00100;Dbxref=GenBank:WP_014614523.1;Name=WP_014614523.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=CYJ02_RS00100;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014614523.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 22953 23351 . - . ID=gene-CYJ02_RS00105;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CYJ02_RS00105;old_locus_tag=CYJ02_00105 NZ_PJUQ01000001.1 Protein Homology CDS 22953 23351 . - 0 ID=cds-WP_014614524.1;Parent=gene-CYJ02_RS00105;Dbxref=GenBank:WP_014614524.1;Name=WP_014614524.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CYJ02_RS00105;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_014614524.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 23976 24857 . + . ID=gene-CYJ02_RS00110;Name=CYJ02_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00110;old_locus_tag=CYJ02_00110 NZ_PJUQ01000001.1 Protein Homology CDS 23976 24857 . + 0 ID=cds-WP_014614525.1;Parent=gene-CYJ02_RS00110;Dbxref=GenBank:WP_014614525.1;Name=WP_014614525.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614525.1;locus_tag=CYJ02_RS00110;product=DMT family transporter;protein_id=WP_014614525.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 24877 25377 . + . ID=gene-CYJ02_RS00115;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CYJ02_RS00115;old_locus_tag=CYJ02_00115 NZ_PJUQ01000001.1 Protein Homology CDS 24877 25377 . + 0 ID=cds-WP_015728751.1;Parent=gene-CYJ02_RS00115;Dbxref=GenBank:WP_015728751.1;Name=WP_015728751.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CYJ02_RS00115;product=preQ(1) synthase;protein_id=WP_015728751.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 25699 26193 . - . ID=gene-CYJ02_RS00120;Name=CYJ02_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00120;old_locus_tag=CYJ02_00120 NZ_PJUQ01000001.1 Protein Homology CDS 25699 26193 . - 0 ID=cds-WP_070407458.1;Parent=gene-CYJ02_RS00120;Dbxref=GenBank:WP_070407458.1;Name=WP_070407458.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=CYJ02_RS00120;product=GNAT family N-acetyltransferase;protein_id=WP_070407458.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 26193 27434 . - . ID=gene-CYJ02_RS00125;Name=CYJ02_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00125;old_locus_tag=CYJ02_00125 NZ_PJUQ01000001.1 Protein Homology CDS 26193 27434 . - 0 ID=cds-WP_157929420.1;Parent=gene-CYJ02_RS00125;Dbxref=GenBank:WP_157929420.1;Name=WP_157929420.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ02_RS00125;product=MFS transporter;protein_id=WP_157929420.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 27908 29413 . + . ID=gene-CYJ02_RS00130;Name=CYJ02_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00130;old_locus_tag=CYJ02_00130 NZ_PJUQ01000001.1 Protein Homology CDS 27908 29413 . + 0 ID=cds-WP_014614532.1;Parent=gene-CYJ02_RS00130;Dbxref=GenBank:WP_014614532.1;Name=WP_014614532.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=CYJ02_RS00130;product=peptide MFS transporter;protein_id=WP_014614532.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 29764 31266 . + . ID=gene-CYJ02_RS00135;Name=CYJ02_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00135;old_locus_tag=CYJ02_00135 NZ_PJUQ01000001.1 Protein Homology CDS 29764 31266 . + 0 ID=cds-WP_063284918.1;Parent=gene-CYJ02_RS00135;Dbxref=GenBank:WP_063284918.1;Name=WP_063284918.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614533.1;locus_tag=CYJ02_RS00135;product=peptide MFS transporter;protein_id=WP_063284918.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 31401 32333 . + . ID=gene-CYJ02_RS00140;Name=CYJ02_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00140;old_locus_tag=CYJ02_00140 NZ_PJUQ01000001.1 Protein Homology CDS 31401 32333 . + 0 ID=cds-WP_014614534.1;Parent=gene-CYJ02_RS00140;Dbxref=GenBank:WP_014614534.1;Name=WP_014614534.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=CYJ02_RS00140;product=diacylglycerol/lipid kinase family protein;protein_id=WP_014614534.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 32419 32955 . - . ID=gene-CYJ02_RS00145;Name=CYJ02_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00145;old_locus_tag=CYJ02_00145 NZ_PJUQ01000001.1 Protein Homology CDS 32419 32955 . - 0 ID=cds-WP_014614535.1;Parent=gene-CYJ02_RS00145;Dbxref=GenBank:WP_014614535.1;Name=WP_014614535.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168530.1;locus_tag=CYJ02_RS00145;product=5' nucleotidase%2C NT5C type;protein_id=WP_014614535.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 33056 34105 . - . ID=gene-CYJ02_RS00150;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CYJ02_RS00150;old_locus_tag=CYJ02_00150 NZ_PJUQ01000001.1 Protein Homology CDS 33056 34105 . - 0 ID=cds-WP_063279021.1;Parent=gene-CYJ02_RS00150;Dbxref=GenBank:WP_063279021.1;Name=WP_063279021.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=CYJ02_RS00150;product=histidinol-phosphate transaminase;protein_id=WP_063279021.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 34430 35947 . - . ID=gene-CYJ02_RS00155;Name=CYJ02_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00155;old_locus_tag=CYJ02_00155 NZ_PJUQ01000001.1 Protein Homology CDS 34430 35947 . - 0 ID=cds-WP_014614537.1;Parent=gene-CYJ02_RS00155;Dbxref=GenBank:WP_014614537.1;Name=WP_014614537.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614537.1;locus_tag=CYJ02_RS00155;product=ABC transporter permease/substrate-binding protein;protein_id=WP_014614537.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 35944 36903 . - . ID=gene-CYJ02_RS00160;Name=CYJ02_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00160;old_locus_tag=CYJ02_00160 NZ_PJUQ01000001.1 Protein Homology CDS 35944 36903 . - 0 ID=cds-WP_014614538.1;Parent=gene-CYJ02_RS00160;Dbxref=GenBank:WP_014614538.1;Name=WP_014614538.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219830.1;locus_tag=CYJ02_RS00160;product=ABC transporter ATP-binding protein;protein_id=WP_014614538.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 37142 38923 . - . ID=gene-CYJ02_RS00165;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS00165;old_locus_tag=CYJ02_00165 NZ_PJUQ01000001.1 Protein Homology CDS 37142 38923 . - 0 ID=cds-WP_101431211.1;Parent=gene-CYJ02_RS00165;Dbxref=GenBank:WP_101431211.1;Name=WP_101431211.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=CYJ02_RS00165;product=DNA helicase RecQ;protein_id=WP_101431211.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 38933 40810 . - . ID=gene-CYJ02_RS00170;Name=CYJ02_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00170;old_locus_tag=CYJ02_00170 NZ_PJUQ01000001.1 Protein Homology CDS 38933 40810 . - 0 ID=cds-WP_101431212.1;Parent=gene-CYJ02_RS00170;Dbxref=GenBank:WP_101431212.1;Name=WP_101431212.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=CYJ02_RS00170;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_101431212.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 40922 41737 . + . ID=gene-CYJ02_RS00175;Name=CYJ02_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00175;old_locus_tag=CYJ02_00175 NZ_PJUQ01000001.1 Protein Homology CDS 40922 41737 . + 0 ID=cds-WP_101431213.1;Parent=gene-CYJ02_RS00175;Dbxref=GenBank:WP_101431213.1;Name=WP_101431213.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168536.1;locus_tag=CYJ02_RS00175;product=ZIP family metal transporter;protein_id=WP_101431213.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 41994 43607 . - . ID=gene-CYJ02_RS00180;Name=CYJ02_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00180;old_locus_tag=CYJ02_00180 NZ_PJUQ01000001.1 Protein Homology CDS 41994 43607 . - 0 ID=cds-WP_274539891.1;Parent=gene-CYJ02_RS00180;Dbxref=GenBank:WP_274539891.1;Name=WP_274539891.1;Ontology_term=GO:0043213,GO:0008234,GO:0043214,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,ABC-type bacteriocin transporter activity|0043214||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: protein motif:HMM:TIGR01193.1;locus_tag=CYJ02_RS00180;product=peptide cleavage/export ABC transporter;protein_id=WP_274539891.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 43564 43839 . - . ID=gene-CYJ02_RS12885;Name=CYJ02_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12885 NZ_PJUQ01000001.1 Protein Homology CDS 43564 43839 . - 0 ID=cds-WP_198586524.1;Parent=gene-CYJ02_RS12885;Dbxref=GenBank:WP_198586524.1;Name=WP_198586524.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ02_RS12885;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_198586524.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 43839 44036 . - . ID=gene-CYJ02_RS12890;Name=CYJ02_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12890 NZ_PJUQ01000001.1 Protein Homology CDS 43839 44036 . - 0 ID=cds-WP_197737723.1;Parent=gene-CYJ02_RS12890;Dbxref=GenBank:WP_197737723.1;Name=WP_197737723.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ02_RS12890;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_197737723.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 43960 44151 . - . ID=gene-CYJ02_RS12895;Name=CYJ02_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12895 NZ_PJUQ01000001.1 Protein Homology CDS 43960 44151 . - 0 ID=cds-WP_197737724.1;Parent=gene-CYJ02_RS12895;Dbxref=GenBank:WP_197737724.1;Name=WP_197737724.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=CYJ02_RS12895;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_197737724.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 44276 44458 . - . ID=gene-CYJ02_RS00185;Name=CYJ02_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00185;old_locus_tag=CYJ02_00185 NZ_PJUQ01000001.1 GeneMarkS-2+ CDS 44276 44458 . - 0 ID=cds-WP_037543780.1;Parent=gene-CYJ02_RS00185;Dbxref=GenBank:WP_037543780.1;Name=WP_037543780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS00185;product=hypothetical protein;protein_id=WP_037543780.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 44530 44838 . - . ID=gene-CYJ02_RS00190;Name=CYJ02_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00190;old_locus_tag=CYJ02_00190 NZ_PJUQ01000001.1 Protein Homology CDS 44530 44838 . - 0 ID=cds-WP_049770161.1;Parent=gene-CYJ02_RS00190;Dbxref=GenBank:WP_049770161.1;Name=WP_049770161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024424.7;locus_tag=CYJ02_RS00190;product=DUF3884 family protein;protein_id=WP_049770161.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 44910 46199 . - . ID=gene-CYJ02_RS00195;Name=CYJ02_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00195;old_locus_tag=CYJ02_00195 NZ_PJUQ01000001.1 Protein Homology CDS 44910 46199 . - 0 ID=cds-WP_051144739.1;Parent=gene-CYJ02_RS00195;Dbxref=GenBank:WP_051144739.1;Name=WP_051144739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=CYJ02_RS00195;product=glycosyltransferase;protein_id=WP_051144739.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq pseudogene 47292 47674 . - . ID=gene-CYJ02_RS13155;Name=CYJ02_RS13155;end_range=47674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13155;old_locus_tag=CYJ02_00205;partial=true;pseudo=true;start_range=.,47292 NZ_PJUQ01000001.1 Protein Homology CDS 47292 47674 . - 0 ID=cds-CYJ02_RS13155;Parent=gene-CYJ02_RS13155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=47674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ02_RS13155;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,47292;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 47789 49726 . - . ID=gene-CYJ02_RS00210;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=CYJ02_RS00210;old_locus_tag=CYJ02_00210 NZ_PJUQ01000001.1 Protein Homology CDS 47789 49726 . - 0 ID=cds-WP_037543783.1;Parent=gene-CYJ02_RS00210;Dbxref=GenBank:WP_037543783.1;Name=WP_037543783.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834931.1;locus_tag=CYJ02_RS00210;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_037543783.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 50071 51075 . - . ID=gene-CYJ02_RS00215;Name=CYJ02_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00215;old_locus_tag=CYJ02_00215 NZ_PJUQ01000001.1 Protein Homology CDS 50071 51075 . - 0 ID=cds-WP_014614543.1;Parent=gene-CYJ02_RS00215;Dbxref=GenBank:WP_014614543.1;Name=WP_014614543.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=CYJ02_RS00215;product=5-oxoprolinase subunit C family protein;protein_id=WP_014614543.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 51072 51755 . - . ID=gene-CYJ02_RS00220;Name=CYJ02_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00220;old_locus_tag=CYJ02_00220 NZ_PJUQ01000001.1 Protein Homology CDS 51072 51755 . - 0 ID=cds-WP_101431214.1;Parent=gene-CYJ02_RS00220;Dbxref=GenBank:WP_101431214.1;Name=WP_101431214.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166150.1;locus_tag=CYJ02_RS00220;product=5-oxoprolinase subunit B family protein;protein_id=WP_101431214.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 51766 51975 . - . ID=gene-CYJ02_RS00225;Name=CYJ02_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00225;old_locus_tag=CYJ02_00225 NZ_PJUQ01000001.1 Protein Homology CDS 51766 51975 . - 0 ID=cds-WP_014614545.1;Parent=gene-CYJ02_RS00225;Dbxref=GenBank:WP_014614545.1;Name=WP_014614545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614545.1;locus_tag=CYJ02_RS00225;product=hypothetical protein;protein_id=WP_014614545.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 51984 52598 . - . ID=gene-CYJ02_RS00230;Name=CYJ02_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00230;old_locus_tag=CYJ02_00230 NZ_PJUQ01000001.1 Protein Homology CDS 51984 52598 . - 0 ID=cds-WP_101431215.1;Parent=gene-CYJ02_RS00230;Dbxref=GenBank:WP_101431215.1;Name=WP_101431215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166152.1;locus_tag=CYJ02_RS00230;product=aminotransferase class IV;protein_id=WP_101431215.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 52595 53743 . - . ID=gene-CYJ02_RS00235;Name=CYJ02_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00235;old_locus_tag=CYJ02_00235 NZ_PJUQ01000001.1 Protein Homology CDS 52595 53743 . - 0 ID=cds-WP_037543791.1;Parent=gene-CYJ02_RS00235;Dbxref=GenBank:WP_037543791.1;Name=WP_037543791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=CYJ02_RS00235;product=chorismate-binding protein;protein_id=WP_037543791.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 53727 54320 . - . ID=gene-CYJ02_RS00240;Name=CYJ02_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00240;old_locus_tag=CYJ02_00240 NZ_PJUQ01000001.1 Protein Homology CDS 53727 54320 . - 0 ID=cds-WP_101431216.1;Parent=gene-CYJ02_RS00240;Dbxref=GenBank:WP_101431216.1;Name=WP_101431216.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=CYJ02_RS00240;product=anthranilate synthase component II;protein_id=WP_101431216.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 54581 55249 . + . ID=gene-CYJ02_RS00245;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CYJ02_RS00245;old_locus_tag=CYJ02_00245 NZ_PJUQ01000001.1 Protein Homology CDS 54581 55249 . + 0 ID=cds-WP_014614548.1;Parent=gene-CYJ02_RS00245;Dbxref=GenBank:WP_014614548.1;Name=WP_014614548.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166155.1;locus_tag=CYJ02_RS00245;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_014614548.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 55249 55680 . + . ID=gene-CYJ02_RS00250;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CYJ02_RS00250;old_locus_tag=CYJ02_00250 NZ_PJUQ01000001.1 Protein Homology CDS 55249 55680 . + 0 ID=cds-WP_014614549.1;Parent=gene-CYJ02_RS00250;Dbxref=GenBank:WP_014614549.1;Name=WP_014614549.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=CYJ02_RS00250;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_014614549.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 55673 56386 . + . ID=gene-CYJ02_RS00255;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CYJ02_RS00255;old_locus_tag=CYJ02_00255 NZ_PJUQ01000001.1 Protein Homology CDS 55673 56386 . + 0 ID=cds-WP_014614550.1;Parent=gene-CYJ02_RS00255;Dbxref=GenBank:WP_014614550.1;Name=WP_014614550.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445901.1;locus_tag=CYJ02_RS00255;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_014614550.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 56534 57133 . + . ID=gene-CYJ02_RS00260;Name=CYJ02_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00260;old_locus_tag=CYJ02_00260 NZ_PJUQ01000001.1 Protein Homology CDS 56534 57133 . + 0 ID=cds-WP_037543793.1;Parent=gene-CYJ02_RS00260;Dbxref=GenBank:WP_037543793.1;Name=WP_037543793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614551.1;locus_tag=CYJ02_RS00260;product=hypothetical protein;protein_id=WP_037543793.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 57203 57457 . + . ID=gene-CYJ02_RS00265;Name=CYJ02_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00265;old_locus_tag=CYJ02_00265 NZ_PJUQ01000001.1 Protein Homology CDS 57203 57457 . + 0 ID=cds-WP_014614552.1;Parent=gene-CYJ02_RS00265;Dbxref=GenBank:WP_014614552.1;Name=WP_014614552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424461.1;locus_tag=CYJ02_RS00265;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_014614552.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 57630 58610 . - . ID=gene-CYJ02_RS00270;Name=CYJ02_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00270;old_locus_tag=CYJ02_00270 NZ_PJUQ01000001.1 Protein Homology CDS 57630 58610 . - 0 ID=cds-WP_063279013.1;Parent=gene-CYJ02_RS00270;Dbxref=GenBank:WP_063279013.1;Name=WP_063279013.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=CYJ02_RS00270;product=glycosyltransferase family 2 protein;protein_id=WP_063279013.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 59427 60782 . - . ID=gene-CYJ02_RS00275;Name=CYJ02_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00275;old_locus_tag=CYJ02_00275 NZ_PJUQ01000001.1 Protein Homology CDS 59427 60782 . - 0 ID=cds-WP_014614554.1;Parent=gene-CYJ02_RS00275;Dbxref=GenBank:WP_014614554.1;Name=WP_014614554.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168550.1;locus_tag=CYJ02_RS00275;product=hemolysin family protein;protein_id=WP_014614554.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 61201 63099 . - . ID=gene-CYJ02_RS00280;Name=CYJ02_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00280;old_locus_tag=CYJ02_00280 NZ_PJUQ01000001.1 Protein Homology CDS 61201 63099 . - 0 ID=cds-WP_101431217.1;Parent=gene-CYJ02_RS00280;Dbxref=GenBank:WP_101431217.1;Name=WP_101431217.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168551.1;locus_tag=CYJ02_RS00280;product=PTS fructose transporter subunit IIABC;protein_id=WP_101431217.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 63101 64024 . - . ID=gene-CYJ02_RS00285;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00285;old_locus_tag=CYJ02_00285 NZ_PJUQ01000001.1 Protein Homology CDS 63101 64024 . - 0 ID=cds-WP_101431218.1;Parent=gene-CYJ02_RS00285;Dbxref=GenBank:WP_101431218.1;Name=WP_101431218.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=CYJ02_RS00285;product=1-phosphofructokinase;protein_id=WP_101431218.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 64024 64776 . - . ID=gene-CYJ02_RS00290;Name=CYJ02_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00290;old_locus_tag=CYJ02_00290 NZ_PJUQ01000001.1 Protein Homology CDS 64024 64776 . - 0 ID=cds-WP_101431219.1;Parent=gene-CYJ02_RS00290;Dbxref=GenBank:WP_101431219.1;Name=WP_101431219.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614557.1;locus_tag=CYJ02_RS00290;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_101431219.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 65029 65247 . + . ID=gene-CYJ02_RS00295;Name=CYJ02_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00295;old_locus_tag=CYJ02_00295 NZ_PJUQ01000001.1 Protein Homology CDS 65029 65247 . + 0 ID=cds-WP_230314544.1;Parent=gene-CYJ02_RS00295;Dbxref=GenBank:WP_230314544.1;Name=WP_230314544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614558.1;locus_tag=CYJ02_RS00295;product=DUF6007 family protein;protein_id=WP_230314544.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 65360 65563 . + . ID=gene-CYJ02_RS00300;Name=CYJ02_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00300;old_locus_tag=CYJ02_00300 NZ_PJUQ01000001.1 Protein Homology CDS 65360 65563 . + 0 ID=cds-WP_037543799.1;Parent=gene-CYJ02_RS00300;Dbxref=GenBank:WP_037543799.1;Name=WP_037543799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614559.1;locus_tag=CYJ02_RS00300;product=hypothetical protein;protein_id=WP_037543799.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 65609 65788 . - . ID=gene-CYJ02_RS00305;Name=CYJ02_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00305;old_locus_tag=CYJ02_00305 NZ_PJUQ01000001.1 Protein Homology CDS 65609 65788 . - 0 ID=cds-WP_015728727.1;Parent=gene-CYJ02_RS00305;Dbxref=GenBank:WP_015728727.1;Name=WP_015728727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166167.1;locus_tag=CYJ02_RS00305;product=VraH family peptide resistance protein;protein_id=WP_015728727.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 65938 66417 . - . ID=gene-CYJ02_RS00310;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CYJ02_RS00310;old_locus_tag=CYJ02_00310 NZ_PJUQ01000001.1 Protein Homology CDS 65938 66417 . - 0 ID=cds-WP_014614561.1;Parent=gene-CYJ02_RS00310;Dbxref=GenBank:WP_014614561.1;Name=WP_014614561.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614561.1;locus_tag=CYJ02_RS00310;product=Cys-tRNA(Pro) deacylase;protein_id=WP_014614561.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 66440 68764 . - . ID=gene-CYJ02_RS00315;Name=CYJ02_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00315;old_locus_tag=CYJ02_00315 NZ_PJUQ01000001.1 Protein Homology CDS 66440 68764 . - 0 ID=cds-WP_101431220.1;Parent=gene-CYJ02_RS00315;Dbxref=GenBank:WP_101431220.1;Name=WP_101431220.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=CYJ02_RS00315;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_101431220.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 68902 70068 . - . ID=gene-CYJ02_RS00320;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00320;old_locus_tag=CYJ02_00320 NZ_PJUQ01000001.1 Protein Homology CDS 68902 70068 . - 0 ID=cds-WP_101431221.1;Parent=gene-CYJ02_RS00320;Dbxref=GenBank:WP_101431221.1;Name=WP_101431221.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=CYJ02_RS00320;product=multidrug efflux MFS transporter NorA;protein_id=WP_101431221.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 70386 71003 . + . ID=gene-CYJ02_RS00325;Name=CYJ02_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00325;old_locus_tag=CYJ02_00325 NZ_PJUQ01000001.1 Protein Homology CDS 70386 71003 . + 0 ID=cds-WP_020219822.1;Parent=gene-CYJ02_RS00325;Dbxref=GenBank:WP_020219822.1;Name=WP_020219822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=CYJ02_RS00325;product=DUF1361 domain-containing protein;protein_id=WP_020219822.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 71307 72017 . + . ID=gene-CYJ02_RS00335;Name=CYJ02_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00335;old_locus_tag=CYJ02_00335 NZ_PJUQ01000001.1 Protein Homology CDS 71307 72017 . + 0 ID=cds-WP_101431222.1;Parent=gene-CYJ02_RS00335;Dbxref=GenBank:WP_101431222.1;Name=WP_101431222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166173.1;locus_tag=CYJ02_RS00335;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_101431222.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 72148 73086 . - . ID=gene-CYJ02_RS00340;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CYJ02_RS00340;old_locus_tag=CYJ02_00340 NZ_PJUQ01000001.1 Protein Homology CDS 72148 73086 . - 0 ID=cds-WP_101431223.1;Parent=gene-CYJ02_RS00340;Dbxref=GenBank:WP_101431223.1;Name=WP_101431223.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=CYJ02_RS00340;product=malate dehydrogenase;protein_id=WP_101431223.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 73474 74319 . - . ID=gene-CYJ02_RS00345;Name=CYJ02_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00345;old_locus_tag=CYJ02_00345 NZ_PJUQ01000001.1 Protein Homology CDS 73474 74319 . - 0 ID=cds-WP_063278890.1;Parent=gene-CYJ02_RS00345;Dbxref=GenBank:WP_063278890.1;Name=WP_063278890.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.7;locus_tag=CYJ02_RS00345;product=AAA family ATPase;protein_id=WP_063278890.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 74520 74801 . - . ID=gene-CYJ02_RS12360;Name=CYJ02_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12360 NZ_PJUQ01000001.1 GeneMarkS-2+ CDS 74520 74801 . - 0 ID=cds-WP_041614766.1;Parent=gene-CYJ02_RS12360;Dbxref=GenBank:WP_041614766.1;Name=WP_041614766.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12360;product=AAA family ATPase;protein_id=WP_041614766.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 74989 75270 . - . ID=gene-CYJ02_RS00350;Name=CYJ02_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00350;old_locus_tag=CYJ02_00350 NZ_PJUQ01000001.1 Protein Homology CDS 74989 75270 . - 0 ID=cds-WP_014614570.1;Parent=gene-CYJ02_RS00350;Dbxref=GenBank:WP_014614570.1;Name=WP_014614570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=CYJ02_RS00350;product=hypothetical protein;protein_id=WP_014614570.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 75353 76261 . - . ID=gene-CYJ02_RS00355;Name=CYJ02_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00355;old_locus_tag=CYJ02_00355 NZ_PJUQ01000001.1 Protein Homology CDS 75353 76261 . - 0 ID=cds-WP_063278889.1;Parent=gene-CYJ02_RS00355;Dbxref=GenBank:WP_063278889.1;Name=WP_063278889.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614571.1;locus_tag=CYJ02_RS00355;product=aldo/keto reductase;protein_id=WP_063278889.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 76288 77217 . - . ID=gene-CYJ02_RS00360;Name=CYJ02_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00360;old_locus_tag=CYJ02_00360 NZ_PJUQ01000001.1 Protein Homology CDS 76288 77217 . - 0 ID=cds-WP_015728720.1;Parent=gene-CYJ02_RS00360;Dbxref=GenBank:WP_015728720.1;Name=WP_015728720.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614572.1;locus_tag=CYJ02_RS00360;product=CobW family GTP-binding protein;protein_id=WP_015728720.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 77449 77886 . + . ID=gene-CYJ02_RS00365;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00365;old_locus_tag=CYJ02_00365 NZ_PJUQ01000001.1 Protein Homology CDS 77449 77886 . + 0 ID=cds-WP_014614573.1;Parent=gene-CYJ02_RS00365;Dbxref=GenBank:WP_014614573.1;Name=WP_014614573.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=CYJ02_RS00365;product=global transcriptional regulator MgrA;protein_id=WP_014614573.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 78272 79933 . - . ID=gene-CYJ02_RS00375;Name=CYJ02_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00375;old_locus_tag=CYJ02_00375 NZ_PJUQ01000001.1 Protein Homology CDS 78272 79933 . - 0 ID=cds-WP_101431224.1;Parent=gene-CYJ02_RS00375;Dbxref=GenBank:WP_101431224.1;Name=WP_101431224.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=CYJ02_RS00375;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_101431224.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 79934 81571 . - . ID=gene-CYJ02_RS00380;Name=CYJ02_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00380;old_locus_tag=CYJ02_00380 NZ_PJUQ01000001.1 Protein Homology CDS 79934 81571 . - 0 ID=cds-WP_101431225.1;Parent=gene-CYJ02_RS00380;Dbxref=GenBank:WP_101431225.1;Name=WP_101431225.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614575.1;locus_tag=CYJ02_RS00380;product=ABC transporter ATP-binding protein/permease;protein_id=WP_101431225.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 81850 82704 . + . ID=gene-CYJ02_RS00385;Name=CYJ02_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00385;old_locus_tag=CYJ02_00385 NZ_PJUQ01000001.1 Protein Homology CDS 81850 82704 . + 0 ID=cds-WP_015728718.1;Parent=gene-CYJ02_RS00385;Dbxref=GenBank:WP_015728718.1;Name=WP_015728718.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=CYJ02_RS00385;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_015728718.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 83088 84077 . + . ID=gene-CYJ02_RS00390;Name=CYJ02_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00390;old_locus_tag=CYJ02_00390 NZ_PJUQ01000001.1 Protein Homology CDS 83088 84077 . + 0 ID=cds-WP_101431226.1;Parent=gene-CYJ02_RS00390;Dbxref=GenBank:WP_101431226.1;Name=WP_101431226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614577.1;locus_tag=CYJ02_RS00390;product=hypothetical protein;protein_id=WP_101431226.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 84078 84524 . + . ID=gene-CYJ02_RS00395;Name=CYJ02_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00395;old_locus_tag=CYJ02_00395 NZ_PJUQ01000001.1 Protein Homology CDS 84078 84524 . + 0 ID=cds-WP_014614578.1;Parent=gene-CYJ02_RS00395;Dbxref=GenBank:WP_014614578.1;Name=WP_014614578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166183.1;locus_tag=CYJ02_RS00395;product=YaiI/YqxD family protein;protein_id=WP_014614578.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 84625 85191 . + . ID=gene-CYJ02_RS00400;Name=CYJ02_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00400;old_locus_tag=CYJ02_00400 NZ_PJUQ01000001.1 Protein Homology CDS 84625 85191 . + 0 ID=cds-WP_031253776.1;Parent=gene-CYJ02_RS00400;Dbxref=GenBank:WP_031253776.1;Name=WP_031253776.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=CYJ02_RS00400;product=LOG family protein;protein_id=WP_031253776.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 86002 86550 . - . ID=gene-CYJ02_RS00405;Name=CYJ02_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00405;old_locus_tag=CYJ02_00405 NZ_PJUQ01000001.1 Protein Homology CDS 86002 86550 . - 0 ID=cds-WP_014614580.1;Parent=gene-CYJ02_RS00405;Dbxref=GenBank:WP_014614580.1;Name=WP_014614580.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614580.1;locus_tag=CYJ02_RS00405;product=GNAT family N-acetyltransferase;protein_id=WP_014614580.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 86760 87059 . - . ID=gene-CYJ02_RS00410;Name=CYJ02_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00410;old_locus_tag=CYJ02_00410 NZ_PJUQ01000001.1 Protein Homology CDS 86760 87059 . - 0 ID=cds-WP_014614581.1;Parent=gene-CYJ02_RS00410;Dbxref=GenBank:WP_014614581.1;Name=WP_014614581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=CYJ02_RS00410;product=hypothetical protein;protein_id=WP_014614581.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 87182 87517 . - . ID=gene-CYJ02_RS00415;Name=CYJ02_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00415;old_locus_tag=CYJ02_00415 NZ_PJUQ01000001.1 Protein Homology CDS 87182 87517 . - 0 ID=cds-WP_014614582.1;Parent=gene-CYJ02_RS00415;Dbxref=GenBank:WP_014614582.1;Name=WP_014614582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614582.1;locus_tag=CYJ02_RS00415;product=SA0632 family lipoprotein;protein_id=WP_014614582.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 87587 88042 . - . ID=gene-CYJ02_RS00420;Name=CYJ02_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00420;old_locus_tag=CYJ02_00420 NZ_PJUQ01000001.1 Protein Homology CDS 87587 88042 . - 0 ID=cds-WP_101431227.1;Parent=gene-CYJ02_RS00420;Dbxref=GenBank:WP_101431227.1;Name=WP_101431227.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166188.1;locus_tag=CYJ02_RS00420;product=GNAT family N-acetyltransferase;protein_id=WP_101431227.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 88141 88824 . + . ID=gene-CYJ02_RS00425;Name=CYJ02_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00425;old_locus_tag=CYJ02_00425 NZ_PJUQ01000001.1 Protein Homology CDS 88141 88824 . + 0 ID=cds-WP_014614584.1;Parent=gene-CYJ02_RS00425;Dbxref=GenBank:WP_014614584.1;Name=WP_014614584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=CYJ02_RS00425;product=DUF1129 family protein;protein_id=WP_014614584.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 88909 89400 . - . ID=gene-CYJ02_RS00430;Name=CYJ02_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00430;old_locus_tag=CYJ02_00430 NZ_PJUQ01000001.1 Protein Homology CDS 88909 89400 . - 0 ID=cds-WP_015728715.1;Parent=gene-CYJ02_RS00430;Dbxref=GenBank:WP_015728715.1;Name=WP_015728715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168579.1;locus_tag=CYJ02_RS00430;product=DUF456 domain-containing protein;protein_id=WP_015728715.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 89422 90627 . - . ID=gene-CYJ02_RS00435;Name=CYJ02_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00435;old_locus_tag=CYJ02_00435 NZ_PJUQ01000001.1 Protein Homology CDS 89422 90627 . - 0 ID=cds-WP_037543811.1;Parent=gene-CYJ02_RS00435;Dbxref=GenBank:WP_037543811.1;Name=WP_037543811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166191.1;locus_tag=CYJ02_RS00435;product=sugar efflux transporter;protein_id=WP_037543811.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 90707 91576 . - . ID=gene-CYJ02_RS00440;Name=CYJ02_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00440;old_locus_tag=CYJ02_00440 NZ_PJUQ01000001.1 Protein Homology CDS 90707 91576 . - 0 ID=cds-WP_014614587.1;Parent=gene-CYJ02_RS00440;Dbxref=GenBank:WP_014614587.1;Name=WP_014614587.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614587.1;locus_tag=CYJ02_RS00440;product=LysR family transcriptional regulator;protein_id=WP_014614587.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 91665 92261 . - . ID=gene-CYJ02_RS00445;Name=CYJ02_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00445;old_locus_tag=CYJ02_00445 NZ_PJUQ01000001.1 Protein Homology CDS 91665 92261 . - 0 ID=cds-WP_014614588.1;Parent=gene-CYJ02_RS00445;Dbxref=GenBank:WP_014614588.1;Name=WP_014614588.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=CYJ02_RS00445;product=ribonuclease FAU-1 family protein;protein_id=WP_014614588.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 92584 93063 . - . ID=gene-CYJ02_RS00450;Name=CYJ02_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00450;old_locus_tag=CYJ02_00450 NZ_PJUQ01000001.1 Protein Homology CDS 92584 93063 . - 0 ID=cds-WP_101431228.1;Parent=gene-CYJ02_RS00450;Dbxref=GenBank:WP_101431228.1;Name=WP_101431228.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728712.1;locus_tag=CYJ02_RS00450;product=cupin domain-containing protein;protein_id=WP_101431228.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 93082 93798 . - . ID=gene-CYJ02_RS00455;Name=CYJ02_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00455;old_locus_tag=CYJ02_00455 NZ_PJUQ01000001.1 Protein Homology CDS 93082 93798 . - 0 ID=cds-WP_014614590.1;Parent=gene-CYJ02_RS00455;Dbxref=GenBank:WP_014614590.1;Name=WP_014614590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383182.1;locus_tag=CYJ02_RS00455;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_014614590.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 93874 94878 . - . ID=gene-CYJ02_RS00460;Name=CYJ02_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00460;old_locus_tag=CYJ02_00460 NZ_PJUQ01000001.1 Protein Homology CDS 93874 94878 . - 0 ID=cds-WP_101431229.1;Parent=gene-CYJ02_RS00460;Dbxref=GenBank:WP_101431229.1;Name=WP_101431229.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=CYJ02_RS00460;product=ThiF family adenylyltransferase;protein_id=WP_101431229.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 94878 95645 . - . ID=gene-CYJ02_RS00465;Name=CYJ02_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00465;old_locus_tag=CYJ02_00465 NZ_PJUQ01000001.1 Protein Homology CDS 94878 95645 . - 0 ID=cds-WP_015728710.1;Parent=gene-CYJ02_RS00465;Dbxref=GenBank:WP_015728710.1;Name=WP_015728710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=CYJ02_RS00465;product=thiazole synthase;protein_id=WP_015728710.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 95649 95849 . - . ID=gene-CYJ02_RS00470;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CYJ02_RS00470;old_locus_tag=CYJ02_00470 NZ_PJUQ01000001.1 Protein Homology CDS 95649 95849 . - 0 ID=cds-WP_014614593.1;Parent=gene-CYJ02_RS00470;Dbxref=GenBank:WP_014614593.1;Name=WP_014614593.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614593.1;locus_tag=CYJ02_RS00470;product=sulfur carrier protein ThiS;protein_id=WP_014614593.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 95850 96440 . - . ID=gene-CYJ02_RS00475;Name=CYJ02_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00475;old_locus_tag=CYJ02_00475 NZ_PJUQ01000001.1 Protein Homology CDS 95850 96440 . - 0 ID=cds-WP_015728709.1;Parent=gene-CYJ02_RS00475;Dbxref=GenBank:WP_015728709.1;Name=WP_015728709.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728709.1;locus_tag=CYJ02_RS00475;product=thiamine phosphate synthase;protein_id=WP_015728709.1;transl_table=11 NZ_PJUQ01000001.1 cmsearch riboswitch 96518 96626 . - . ID=id-NZ_PJUQ01000001.1:96518..96626;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000001.1 RefSeq gene 96645 97265 . - . ID=gene-CYJ02_RS00480;Name=CYJ02_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00480;old_locus_tag=CYJ02_00480 NZ_PJUQ01000001.1 Protein Homology CDS 96645 97265 . - 0 ID=cds-WP_063278884.1;Parent=gene-CYJ02_RS00480;Dbxref=GenBank:WP_063278884.1;Name=WP_063278884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166200.1;locus_tag=CYJ02_RS00480;product=Bax inhibitor-1/YccA family protein;protein_id=WP_063278884.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 97606 98433 . + . ID=gene-CYJ02_RS00485;Name=CYJ02_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00485;old_locus_tag=CYJ02_00485 NZ_PJUQ01000001.1 Protein Homology CDS 97606 98433 . + 0 ID=cds-WP_014614596.1;Parent=gene-CYJ02_RS00485;Dbxref=GenBank:WP_014614596.1;Name=WP_014614596.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166201.1;locus_tag=CYJ02_RS00485;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614596.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 98692 99693 . - . ID=gene-CYJ02_RS00490;Name=CYJ02_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00490;old_locus_tag=CYJ02_00490 NZ_PJUQ01000001.1 Protein Homology CDS 98692 99693 . - 0 ID=cds-WP_014614597.1;Parent=gene-CYJ02_RS00490;Dbxref=GenBank:WP_014614597.1;Name=WP_014614597.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=CYJ02_RS00490;product=inorganic phosphate transporter;protein_id=WP_014614597.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 99708 100325 . - . ID=gene-CYJ02_RS00495;Name=CYJ02_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00495;old_locus_tag=CYJ02_00495 NZ_PJUQ01000001.1 Protein Homology CDS 99708 100325 . - 0 ID=cds-WP_014614598.1;Parent=gene-CYJ02_RS00495;Dbxref=GenBank:WP_014614598.1;Name=WP_014614598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=CYJ02_RS00495;product=DUF47 domain-containing protein;protein_id=WP_014614598.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 101079 102977 . - . ID=gene-CYJ02_RS00500;Name=CYJ02_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00500;old_locus_tag=CYJ02_00500 NZ_PJUQ01000001.1 Protein Homology CDS 101079 102977 . - 0 ID=cds-WP_014614599.1;Parent=gene-CYJ02_RS00500;Dbxref=GenBank:WP_014614599.1;Name=WP_014614599.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614599.1;locus_tag=CYJ02_RS00500;product=FtsX-like permease family protein;protein_id=WP_014614599.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 102967 103728 . - . ID=gene-CYJ02_RS00505;Name=CYJ02_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00505;old_locus_tag=CYJ02_00505 NZ_PJUQ01000001.1 Protein Homology CDS 102967 103728 . - 0 ID=cds-WP_014614600.1;Parent=gene-CYJ02_RS00505;Dbxref=GenBank:WP_014614600.1;Name=WP_014614600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166204.1;locus_tag=CYJ02_RS00505;product=ABC transporter ATP-binding protein;protein_id=WP_014614600.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 103834 104856 . - . ID=gene-CYJ02_RS00510;Name=CYJ02_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00510;old_locus_tag=CYJ02_00510 NZ_PJUQ01000001.1 Protein Homology CDS 103834 104856 . - 0 ID=cds-WP_101431230.1;Parent=gene-CYJ02_RS00510;Dbxref=GenBank:WP_101431230.1;Name=WP_101431230.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614601.1;locus_tag=CYJ02_RS00510;product=sensor histidine kinase;protein_id=WP_101431230.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 104843 105523 . - . ID=gene-CYJ02_RS00515;Name=CYJ02_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00515;old_locus_tag=CYJ02_00515 NZ_PJUQ01000001.1 Protein Homology CDS 104843 105523 . - 0 ID=cds-WP_014614602.1;Parent=gene-CYJ02_RS00515;Dbxref=GenBank:WP_014614602.1;Name=WP_014614602.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614602.1;locus_tag=CYJ02_RS00515;product=response regulator transcription factor;protein_id=WP_014614602.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 105529 106449 . - . ID=gene-CYJ02_RS00520;Name=CYJ02_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00520;old_locus_tag=CYJ02_00520 NZ_PJUQ01000001.1 Protein Homology CDS 105529 106449 . - 0 ID=cds-WP_014614603.1;Parent=gene-CYJ02_RS00520;Dbxref=GenBank:WP_014614603.1;Name=WP_014614603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614603.1;locus_tag=CYJ02_RS00520;product=NAD(P)H-binding protein;protein_id=WP_014614603.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 106610 107131 . + . ID=gene-CYJ02_RS00525;Name=CYJ02_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00525;old_locus_tag=CYJ02_00525 NZ_PJUQ01000001.1 Protein Homology CDS 106610 107131 . + 0 ID=cds-WP_096535863.1;Parent=gene-CYJ02_RS00525;Dbxref=GenBank:WP_096535863.1;Name=WP_096535863.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=CYJ02_RS00525;product=GNAT family N-acetyltransferase;protein_id=WP_096535863.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 107396 108421 . - . ID=gene-CYJ02_RS00530;Name=CYJ02_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00530;old_locus_tag=CYJ02_00530 NZ_PJUQ01000001.1 Protein Homology CDS 107396 108421 . - 0 ID=cds-WP_014614605.1;Parent=gene-CYJ02_RS00530;Dbxref=GenBank:WP_014614605.1;Name=WP_014614605.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=CYJ02_RS00530;product=alpha/beta hydrolase;protein_id=WP_014614605.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 108464 109531 . - . ID=gene-CYJ02_RS00535;Name=CYJ02_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00535;old_locus_tag=CYJ02_00535 NZ_PJUQ01000001.1 Protein Homology CDS 108464 109531 . - 0 ID=cds-WP_101431231.1;Parent=gene-CYJ02_RS00535;Dbxref=GenBank:WP_101431231.1;Name=WP_101431231.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=CYJ02_RS00535;product=YkvI family membrane protein;protein_id=WP_101431231.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 110038 111486 . - . ID=gene-CYJ02_RS00540;Name=CYJ02_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00540;old_locus_tag=CYJ02_00540 NZ_PJUQ01000001.1 Protein Homology CDS 110038 111486 . - 0 ID=cds-WP_014614607.1;Parent=gene-CYJ02_RS00540;Dbxref=GenBank:WP_014614607.1;Name=WP_014614607.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614607.1;locus_tag=CYJ02_RS00540;product=MDR family MFS transporter;protein_id=WP_014614607.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 111771 112268 . - . ID=gene-CYJ02_RS00545;Name=CYJ02_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00545;old_locus_tag=CYJ02_00545 NZ_PJUQ01000001.1 Protein Homology CDS 111771 112268 . - 0 ID=cds-WP_014614608.1;Parent=gene-CYJ02_RS00545;Dbxref=GenBank:WP_014614608.1;Name=WP_014614608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614608.1;locus_tag=CYJ02_RS00545;product=hypothetical protein;protein_id=WP_014614608.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 112435 113451 . - . ID=gene-CYJ02_RS00550;Name=CYJ02_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00550;old_locus_tag=CYJ02_00550 NZ_PJUQ01000001.1 Protein Homology CDS 112435 113451 . - 0 ID=cds-WP_065354541.1;Parent=gene-CYJ02_RS00550;Dbxref=GenBank:WP_065354541.1;Name=WP_065354541.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=CYJ02_RS00550;product=FecCD family ABC transporter permease;protein_id=WP_065354541.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 113448 114452 . - . ID=gene-CYJ02_RS00555;Name=CYJ02_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00555;old_locus_tag=CYJ02_00555 NZ_PJUQ01000001.1 Protein Homology CDS 113448 114452 . - 0 ID=cds-WP_037543817.1;Parent=gene-CYJ02_RS00555;Dbxref=GenBank:WP_037543817.1;Name=WP_037543817.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168605.1;locus_tag=CYJ02_RS00555;product=FecCD family ABC transporter permease;protein_id=WP_037543817.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 114478 115281 . - . ID=gene-CYJ02_RS00560;Name=CYJ02_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00560;old_locus_tag=CYJ02_00560 NZ_PJUQ01000001.1 Protein Homology CDS 114478 115281 . - 0 ID=cds-WP_014614611.1;Parent=gene-CYJ02_RS00560;Dbxref=GenBank:WP_014614611.1;Name=WP_014614611.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166215.1;locus_tag=CYJ02_RS00560;product=ABC transporter ATP-binding protein;protein_id=WP_014614611.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 115648 116481 . - . ID=gene-CYJ02_RS00565;Name=CYJ02_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00565;old_locus_tag=CYJ02_00565 NZ_PJUQ01000001.1 Protein Homology CDS 115648 116481 . - 0 ID=cds-WP_096636579.1;Parent=gene-CYJ02_RS00565;Dbxref=GenBank:WP_096636579.1;Name=WP_096636579.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=CYJ02_RS00565;product=YitT family protein;protein_id=WP_096636579.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 116955 118181 . - . ID=gene-CYJ02_RS00570;Name=CYJ02_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00570;old_locus_tag=CYJ02_00570 NZ_PJUQ01000001.1 Protein Homology CDS 116955 118181 . - 0 ID=cds-WP_014614613.1;Parent=gene-CYJ02_RS00570;Dbxref=GenBank:WP_014614613.1;Name=WP_014614613.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=CYJ02_RS00570;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014614613.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 118458 118694 . + . ID=gene-CYJ02_RS00575;Name=CYJ02_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00575;old_locus_tag=CYJ02_00575 NZ_PJUQ01000001.1 Protein Homology CDS 118458 118694 . + 0 ID=cds-WP_014614614.1;Parent=gene-CYJ02_RS00575;Dbxref=GenBank:WP_014614614.1;Name=WP_014614614.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=CYJ02_RS00575;product=FeoA family protein;protein_id=WP_014614614.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 118687 120681 . + . ID=gene-CYJ02_RS00580;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00580;old_locus_tag=CYJ02_00580 NZ_PJUQ01000001.1 Protein Homology CDS 118687 120681 . + 0 ID=cds-WP_015728703.1;Parent=gene-CYJ02_RS00580;Dbxref=GenBank:WP_015728703.1;Name=WP_015728703.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728703.1;locus_tag=CYJ02_RS00580;product=ferrous iron transport protein B;protein_id=WP_015728703.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 120694 120852 . + . ID=gene-CYJ02_RS00585;Name=CYJ02_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00585;old_locus_tag=CYJ02_00585 NZ_PJUQ01000001.1 Protein Homology CDS 120694 120852 . + 0 ID=cds-WP_014614616.1;Parent=gene-CYJ02_RS00585;Dbxref=GenBank:WP_014614616.1;Name=WP_014614616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024081.7;locus_tag=CYJ02_RS00585;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_014614616.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 121010 122764 . - . ID=gene-CYJ02_RS00590;Name=CYJ02_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00590;old_locus_tag=CYJ02_00590 NZ_PJUQ01000001.1 Protein Homology CDS 121010 122764 . - 0 ID=cds-WP_014614617.1;Parent=gene-CYJ02_RS00590;Dbxref=GenBank:WP_014614617.1;Name=WP_014614617.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=CYJ02_RS00590;product=ABC transporter ATP-binding protein;protein_id=WP_014614617.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 123039 124316 . + . ID=gene-CYJ02_RS00595;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=CYJ02_RS00595;old_locus_tag=CYJ02_00595 NZ_PJUQ01000001.1 Protein Homology CDS 123039 124316 . + 0 ID=cds-WP_101431232.1;Parent=gene-CYJ02_RS00595;Dbxref=GenBank:WP_101431232.1;Name=WP_101431232.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166222.1;locus_tag=CYJ02_RS00595;product=penicillin-binding protein PBP4;protein_id=WP_101431232.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 124821 125423 . + . ID=gene-CYJ02_RS00600;Name=CYJ02_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00600;old_locus_tag=CYJ02_00600 NZ_PJUQ01000001.1 Protein Homology CDS 124821 125423 . + 0 ID=cds-WP_157929421.1;Parent=gene-CYJ02_RS00600;Dbxref=GenBank:WP_157929421.1;Name=WP_157929421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012546.7;locus_tag=CYJ02_RS00600;product=alpha/beta hydrolase family protein;protein_id=WP_157929421.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 125620 126018 . - . ID=gene-CYJ02_RS00605;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CYJ02_RS00605;old_locus_tag=CYJ02_00605 NZ_PJUQ01000001.1 Protein Homology CDS 125620 126018 . - 0 ID=cds-WP_014614622.1;Parent=gene-CYJ02_RS00605;Dbxref=GenBank:WP_014614622.1;Name=WP_014614622.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CYJ02_RS00605;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_014614622.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 126112 127203 . - . ID=gene-CYJ02_RS00610;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00610;old_locus_tag=CYJ02_00610 NZ_PJUQ01000001.1 Protein Homology CDS 126112 127203 . - 0 ID=cds-WP_014614623.1;Parent=gene-CYJ02_RS00610;Dbxref=GenBank:WP_014614623.1;Name=WP_014614623.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=CYJ02_RS00610;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_014614623.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 127278 128081 . - . ID=gene-CYJ02_RS00615;Name=CYJ02_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00615;old_locus_tag=CYJ02_00615 NZ_PJUQ01000001.1 Protein Homology CDS 127278 128081 . - 0 ID=cds-WP_014614624.1;Parent=gene-CYJ02_RS00615;Dbxref=GenBank:WP_014614624.1;Name=WP_014614624.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=CYJ02_RS00615;product=ABC transporter permease;protein_id=WP_014614624.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 128360 129154 . + . ID=gene-CYJ02_RS00620;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CYJ02_RS00620;old_locus_tag=CYJ02_00620 NZ_PJUQ01000001.1 Protein Homology CDS 128360 129154 . + 0 ID=cds-WP_014614625.1;Parent=gene-CYJ02_RS00620;Dbxref=GenBank:WP_014614625.1;Name=WP_014614625.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CYJ02_RS00620;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_014614625.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 129368 130189 . - . ID=gene-CYJ02_RS00625;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00625;old_locus_tag=CYJ02_00625 NZ_PJUQ01000001.1 Protein Homology CDS 129368 130189 . - 0 ID=cds-WP_065354545.1;Parent=gene-CYJ02_RS00625;Dbxref=GenBank:WP_065354545.1;Name=WP_065354545.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728699.1;locus_tag=CYJ02_RS00625;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_065354545.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 130571 130981 . + . ID=gene-CYJ02_RS00630;Name=CYJ02_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00630;old_locus_tag=CYJ02_00630 NZ_PJUQ01000001.1 Protein Homology CDS 130571 130981 . + 0 ID=cds-WP_225549913.1;Parent=gene-CYJ02_RS00630;Dbxref=GenBank:WP_225549913.1;Name=WP_225549913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220039.1;locus_tag=CYJ02_RS00630;product=LbetaH domain-containing protein;protein_id=WP_225549913.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 131055 131798 . + . ID=gene-CYJ02_RS00635;Name=CYJ02_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00635;old_locus_tag=CYJ02_00635 NZ_PJUQ01000001.1 Protein Homology CDS 131055 131798 . + 0 ID=cds-WP_101431235.1;Parent=gene-CYJ02_RS00635;Dbxref=GenBank:WP_101431235.1;Name=WP_101431235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728697.1;locus_tag=CYJ02_RS00635;product=M50 family metallopeptidase;protein_id=WP_101431235.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 132080 132844 . - . ID=gene-CYJ02_RS00640;Name=sbnI;gbkey=Gene;gene=sbnI;gene_biotype=protein_coding;locus_tag=CYJ02_RS00640;old_locus_tag=CYJ02_00640 NZ_PJUQ01000001.1 Protein Homology CDS 132080 132844 . - 0 ID=cds-WP_014614629.1;Parent=gene-CYJ02_RS00640;Dbxref=GenBank:WP_014614629.1;Name=WP_014614629.1;gbkey=CDS;gene=sbnI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166229.1;locus_tag=CYJ02_RS00640;product=bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI;protein_id=WP_014614629.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 132841 134043 . - . ID=gene-CYJ02_RS00645;Name=CYJ02_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00645;old_locus_tag=CYJ02_00645 NZ_PJUQ01000001.1 Protein Homology CDS 132841 134043 . - 0 ID=cds-WP_065520681.1;Parent=gene-CYJ02_RS00645;Dbxref=GenBank:WP_065520681.1;Name=WP_065520681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614630.1;locus_tag=CYJ02_RS00645;product=type III PLP-dependent enzyme;protein_id=WP_065520681.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 134018 134812 . - . ID=gene-CYJ02_RS00650;Name=CYJ02_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00650;old_locus_tag=CYJ02_00650 NZ_PJUQ01000001.1 Protein Homology CDS 134018 134812 . - 0 ID=cds-WP_015728694.1;Parent=gene-CYJ02_RS00650;Dbxref=GenBank:WP_015728694.1;Name=WP_015728694.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728694.1;locus_tag=CYJ02_RS00650;product=HpcH/HpaI aldolase family protein;protein_id=WP_015728694.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 134809 136563 . - . ID=gene-CYJ02_RS00655;Name=sbnF;gbkey=Gene;gene=sbnF;gene_biotype=protein_coding;locus_tag=CYJ02_RS00655;old_locus_tag=CYJ02_00655 NZ_PJUQ01000001.1 Protein Homology CDS 134809 136563 . - 0 ID=cds-WP_101431236.1;Parent=gene-CYJ02_RS00655;Dbxref=GenBank:WP_101431236.1;Name=WP_101431236.1;gbkey=CDS;gene=sbnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614632.1;locus_tag=CYJ02_RS00655;product=staphyloferrin B biosynthesis protein SbnF;protein_id=WP_101431236.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 136547 138265 . - . ID=gene-CYJ02_RS00660;Name=CYJ02_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00660;old_locus_tag=CYJ02_00660 NZ_PJUQ01000001.1 Protein Homology CDS 136547 138265 . - 0 ID=cds-WP_101431237.1;Parent=gene-CYJ02_RS00660;Dbxref=GenBank:WP_101431237.1;Name=WP_101431237.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728692.1;locus_tag=CYJ02_RS00660;product=IucA/IucC family protein;protein_id=WP_101431237.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 138252 139511 . - . ID=gene-CYJ02_RS00665;Name=CYJ02_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00665;old_locus_tag=CYJ02_00665 NZ_PJUQ01000001.1 Protein Homology CDS 138252 139511 . - 0 ID=cds-WP_082245603.1;Parent=gene-CYJ02_RS00665;Dbxref=GenBank:WP_082245603.1;Name=WP_082245603.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166234.1;locus_tag=CYJ02_RS00665;product=MFS transporter;protein_id=WP_082245603.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 139486 141261 . - . ID=gene-CYJ02_RS00670;Name=sbnC;gbkey=Gene;gene=sbnC;gene_biotype=protein_coding;locus_tag=CYJ02_RS00670;old_locus_tag=CYJ02_00670 NZ_PJUQ01000001.1 Protein Homology CDS 139486 141261 . - 0 ID=cds-WP_101431238.1;Parent=gene-CYJ02_RS00670;Dbxref=GenBank:WP_101431238.1;Name=WP_101431238.1;gbkey=CDS;gene=sbnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728691.1;locus_tag=CYJ02_RS00670;product=staphyloferrin B biosynthesis protein SbnC;protein_id=WP_101431238.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 141273 142283 . - . ID=gene-CYJ02_RS00675;Name=sbnB;gbkey=Gene;gene=sbnB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00675;old_locus_tag=CYJ02_00675 NZ_PJUQ01000001.1 Protein Homology CDS 141273 142283 . - 0 ID=cds-WP_096535883.1;Parent=gene-CYJ02_RS00675;Dbxref=GenBank:WP_096535883.1;Name=WP_096535883.1;Ontology_term=GO:0019290,GO:0016491;gbkey=CDS;gene=sbnB;go_function=oxidoreductase activity|0016491||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614636.1;locus_tag=CYJ02_RS00675;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=WP_096535883.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 142285 143262 . - . ID=gene-CYJ02_RS00680;Name=sbnA;gbkey=Gene;gene=sbnA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00680;old_locus_tag=CYJ02_00680 NZ_PJUQ01000001.1 Protein Homology CDS 142285 143262 . - 0 ID=cds-WP_096535886.1;Parent=gene-CYJ02_RS00680;Dbxref=GenBank:WP_096535886.1;Name=WP_096535886.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=sbnA;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614637.1;locus_tag=CYJ02_RS00680;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=WP_096535886.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 143499 144482 . + . ID=gene-CYJ02_RS00685;Name=CYJ02_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00685;old_locus_tag=CYJ02_00685 NZ_PJUQ01000001.1 Protein Homology CDS 143499 144482 . + 0 ID=cds-WP_101431239.1;Parent=gene-CYJ02_RS00685;Dbxref=GenBank:WP_101431239.1;Name=WP_101431239.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728689.1;locus_tag=CYJ02_RS00685;product=ABC transporter substrate-binding protein;protein_id=WP_101431239.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 144499 145494 . + . ID=gene-CYJ02_RS00690;Name=CYJ02_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00690;old_locus_tag=CYJ02_00690 NZ_PJUQ01000001.1 Protein Homology CDS 144499 145494 . + 0 ID=cds-WP_101431240.1;Parent=gene-CYJ02_RS00690;Dbxref=GenBank:WP_101431240.1;Name=WP_101431240.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580228.1;locus_tag=CYJ02_RS00690;product=FecCD family ABC transporter permease;protein_id=WP_101431240.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 145491 146489 . + . ID=gene-CYJ02_RS00695;Name=CYJ02_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00695;old_locus_tag=CYJ02_00695 NZ_PJUQ01000001.1 Protein Homology CDS 145491 146489 . + 0 ID=cds-WP_101431241.1;Parent=gene-CYJ02_RS00695;Dbxref=GenBank:WP_101431241.1;Name=WP_101431241.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728687.1;locus_tag=CYJ02_RS00695;product=FecCD family ABC transporter permease;protein_id=WP_101431241.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 146885 147532 . - . ID=gene-CYJ02_RS00700;Name=CYJ02_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00700;old_locus_tag=CYJ02_00700 NZ_PJUQ01000001.1 Protein Homology CDS 146885 147532 . - 0 ID=cds-WP_020220035.1;Parent=gene-CYJ02_RS00700;Dbxref=GenBank:WP_020220035.1;Name=WP_020220035.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220035.1;locus_tag=CYJ02_RS00700;product=metal-dependent transcriptional regulator;protein_id=WP_020220035.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 147654 148430 . + . ID=gene-CYJ02_RS00705;Name=CYJ02_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00705;old_locus_tag=CYJ02_00705 NZ_PJUQ01000001.1 Protein Homology CDS 147654 148430 . + 0 ID=cds-WP_014614642.1;Parent=gene-CYJ02_RS00705;Dbxref=GenBank:WP_014614642.1;Name=WP_014614642.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167322.1;locus_tag=CYJ02_RS00705;product=metal ABC transporter ATP-binding protein;protein_id=WP_014614642.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 148405 149244 . + . ID=gene-CYJ02_RS00710;Name=CYJ02_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00710;old_locus_tag=CYJ02_00710 NZ_PJUQ01000001.1 Protein Homology CDS 148405 149244 . + 0 ID=cds-WP_014614643.1;Parent=gene-CYJ02_RS00710;Dbxref=GenBank:WP_014614643.1;Name=WP_014614643.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=CYJ02_RS00710;product=metal ABC transporter permease;protein_id=WP_014614643.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 149244 150161 . + . ID=gene-CYJ02_RS00715;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=CYJ02_RS00715;old_locus_tag=CYJ02_00715 NZ_PJUQ01000001.1 Protein Homology CDS 149244 150161 . + 0 ID=cds-WP_041613365.1;Parent=gene-CYJ02_RS00715;Dbxref=GenBank:WP_041613365.1;Name=WP_041613365.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501435.1;locus_tag=CYJ02_RS00715;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_041613365.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 150797 151243 . - . ID=gene-CYJ02_RS00720;Name=CYJ02_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00720;old_locus_tag=CYJ02_00720 NZ_PJUQ01000001.1 Protein Homology CDS 150797 151243 . - 0 ID=cds-WP_014614645.1;Parent=gene-CYJ02_RS00720;Dbxref=GenBank:WP_014614645.1;Name=WP_014614645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614645.1;locus_tag=CYJ02_RS00720;product=Na+/H+ antiporter subunit G;protein_id=WP_014614645.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 151227 151520 . - . ID=gene-CYJ02_RS00725;Name=CYJ02_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00725;old_locus_tag=CYJ02_00725 NZ_PJUQ01000001.1 Protein Homology CDS 151227 151520 . - 0 ID=cds-WP_014614646.1;Parent=gene-CYJ02_RS00725;Dbxref=GenBank:WP_014614646.1;Name=WP_014614646.1;Ontology_term=GO:0034220,GO:0015075,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167327.1;locus_tag=CYJ02_RS00725;product=monovalent cation/H+ antiporter complex subunit F;protein_id=WP_014614646.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 151517 151999 . - . ID=gene-CYJ02_RS00730;Name=CYJ02_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00730;old_locus_tag=CYJ02_00730 NZ_PJUQ01000001.1 Protein Homology CDS 151517 151999 . - 0 ID=cds-WP_014614647.1;Parent=gene-CYJ02_RS00730;Dbxref=GenBank:WP_014614647.1;Name=WP_014614647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898376.1;locus_tag=CYJ02_RS00730;product=Na+/H+ antiporter subunit E;protein_id=WP_014614647.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 152000 153499 . - . ID=gene-CYJ02_RS00735;Name=CYJ02_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00735;old_locus_tag=CYJ02_00735 NZ_PJUQ01000001.1 Protein Homology CDS 152000 153499 . - 0 ID=cds-WP_014614648.1;Parent=gene-CYJ02_RS00735;Dbxref=GenBank:WP_014614648.1;Name=WP_014614648.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166250.1;locus_tag=CYJ02_RS00735;product=Na+/H+ antiporter subunit D;protein_id=WP_014614648.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 153492 153836 . - . ID=gene-CYJ02_RS00740;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=CYJ02_RS00740;old_locus_tag=CYJ02_00740 NZ_PJUQ01000001.1 Protein Homology CDS 153492 153836 . - 0 ID=cds-WP_014614649.1;Parent=gene-CYJ02_RS00740;Dbxref=GenBank:WP_014614649.1;Name=WP_014614649.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451046.1;locus_tag=CYJ02_RS00740;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_014614649.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 153833 154258 . - . ID=gene-CYJ02_RS00745;Name=CYJ02_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00745;old_locus_tag=CYJ02_00745 NZ_PJUQ01000001.1 Protein Homology CDS 153833 154258 . - 0 ID=cds-WP_014614650.1;Parent=gene-CYJ02_RS00745;Dbxref=GenBank:WP_014614650.1;Name=WP_014614650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=CYJ02_RS00745;product=monovalent cation/H+ antiporter subunit B;protein_id=WP_014614650.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 154245 156635 . - . ID=gene-CYJ02_RS00750;Name=CYJ02_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00750;old_locus_tag=CYJ02_00750 NZ_PJUQ01000001.1 Protein Homology CDS 154245 156635 . - 0 ID=cds-WP_101431242.1;Parent=gene-CYJ02_RS00750;Dbxref=GenBank:WP_101431242.1;Name=WP_101431242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167332.1;locus_tag=CYJ02_RS00750;product=DUF4040 family protein;protein_id=WP_101431242.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 156657 157208 . - . ID=gene-CYJ02_RS00755;Name=CYJ02_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00755;old_locus_tag=CYJ02_00755 NZ_PJUQ01000001.1 Protein Homology CDS 156657 157208 . - 0 ID=cds-WP_101431243.1;Parent=gene-CYJ02_RS00755;Dbxref=GenBank:WP_101431243.1;Name=WP_101431243.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=CYJ02_RS00755;product=tyrosine-type recombinase/integrase;protein_id=WP_101431243.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 157351 157554 . + . ID=gene-CYJ02_RS00760;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00760;old_locus_tag=CYJ02_00760 NZ_PJUQ01000001.1 Protein Homology CDS 157351 157554 . + 0 ID=cds-WP_101431244.1;Parent=gene-CYJ02_RS00760;Dbxref=GenBank:WP_101431244.1;Name=WP_101431244.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=CYJ02_RS00760;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_101431244.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 157570 157785 . + . ID=gene-CYJ02_RS00765;Name=CYJ02_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00765;old_locus_tag=CYJ02_00765 NZ_PJUQ01000001.1 Protein Homology CDS 157570 157785 . + 0 ID=cds-WP_101431245.1;Parent=gene-CYJ02_RS00765;Dbxref=GenBank:WP_101431245.1;Name=WP_101431245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167335.1;locus_tag=CYJ02_RS00765;product=DUF2922 domain-containing protein;protein_id=WP_101431245.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 158126 158395 . - . ID=gene-CYJ02_RS00770;Name=CYJ02_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00770;old_locus_tag=CYJ02_00770 NZ_PJUQ01000001.1 Protein Homology CDS 158126 158395 . - 0 ID=cds-WP_063284880.1;Parent=gene-CYJ02_RS00770;Dbxref=GenBank:WP_063284880.1;Name=WP_063284880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728682.1;locus_tag=CYJ02_RS00770;product=hypothetical protein;protein_id=WP_063284880.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 158609 159538 . + . ID=gene-CYJ02_RS00775;Name=CYJ02_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00775;old_locus_tag=CYJ02_00775 NZ_PJUQ01000001.1 Protein Homology CDS 158609 159538 . + 0 ID=cds-WP_099987404.1;Parent=gene-CYJ02_RS00775;Dbxref=GenBank:WP_099987404.1;Name=WP_099987404.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=CYJ02_RS00775;product=DMT family transporter;protein_id=WP_099987404.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 161032 161403 . + . ID=gene-CYJ02_RS00780;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=CYJ02_RS00780;old_locus_tag=CYJ02_00780 NZ_PJUQ01000001.1 Protein Homology CDS 161032 161403 . + 0 ID=cds-WP_014614657.1;Parent=gene-CYJ02_RS00780;Dbxref=GenBank:WP_014614657.1;Name=WP_014614657.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=CYJ02_RS00780;product=global transcriptional regulator SarA;protein_id=WP_014614657.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 161614 162330 . - . ID=gene-CYJ02_RS00785;Name=CYJ02_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00785;old_locus_tag=CYJ02_00785 NZ_PJUQ01000001.1 Protein Homology CDS 161614 162330 . - 0 ID=cds-WP_014614658.1;Parent=gene-CYJ02_RS00785;Dbxref=GenBank:WP_014614658.1;Name=WP_014614658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614658.1;locus_tag=CYJ02_RS00785;product=hypothetical protein;protein_id=WP_014614658.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 162419 162922 . - . ID=gene-CYJ02_RS00790;Name=CYJ02_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00790;old_locus_tag=CYJ02_00790 NZ_PJUQ01000001.1 Protein Homology CDS 162419 162922 . - 0 ID=cds-WP_063278864.1;Parent=gene-CYJ02_RS00790;Dbxref=GenBank:WP_063278864.1;Name=WP_063278864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167340.1;locus_tag=CYJ02_RS00790;product=SA0570 family protein;protein_id=WP_063278864.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 163014 163814 . - . ID=gene-CYJ02_RS00795;Name=CYJ02_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00795;old_locus_tag=CYJ02_00795 NZ_PJUQ01000001.1 Protein Homology CDS 163014 163814 . - 0 ID=cds-WP_014614660.1;Parent=gene-CYJ02_RS00795;Dbxref=GenBank:WP_014614660.1;Name=WP_014614660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728680.1;locus_tag=CYJ02_RS00795;product=alpha/beta fold hydrolase;protein_id=WP_014614660.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 163814 164518 . - . ID=gene-CYJ02_RS00800;Name=CYJ02_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00800;old_locus_tag=CYJ02_00800 NZ_PJUQ01000001.1 Protein Homology CDS 163814 164518 . - 0 ID=cds-WP_014614661.1;Parent=gene-CYJ02_RS00800;Dbxref=GenBank:WP_014614661.1;Name=WP_014614661.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=CYJ02_RS00800;product=HAD family hydrolase;protein_id=WP_014614661.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 164575 165468 . - . ID=gene-CYJ02_RS00805;Name=CYJ02_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00805;old_locus_tag=CYJ02_00805 NZ_PJUQ01000001.1 Protein Homology CDS 164575 165468 . - 0 ID=cds-WP_241901292.1;Parent=gene-CYJ02_RS00805;Dbxref=GenBank:WP_241901292.1;Name=WP_241901292.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=CYJ02_RS00805;product=FecCD family ABC transporter permease;protein_id=WP_241901292.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 165515 166396 . - . ID=gene-CYJ02_RS00810;Name=CYJ02_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00810;old_locus_tag=CYJ02_00810 NZ_PJUQ01000001.1 Protein Homology CDS 165515 166396 . - 0 ID=cds-WP_101431247.1;Parent=gene-CYJ02_RS00810;Dbxref=GenBank:WP_101431247.1;Name=WP_101431247.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=CYJ02_RS00810;product=ABC transporter substrate-binding protein;protein_id=WP_101431247.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 166970 167191 . + . ID=gene-CYJ02_RS00815;Name=CYJ02_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00815;old_locus_tag=CYJ02_00815 NZ_PJUQ01000001.1 Protein Homology CDS 166970 167191 . + 0 ID=cds-WP_014614664.1;Parent=gene-CYJ02_RS00815;Dbxref=GenBank:WP_014614664.1;Name=WP_014614664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614664.1;locus_tag=CYJ02_RS00815;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_014614664.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq pseudogene 167247 167887 . + . ID=gene-CYJ02_RS00820;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=CYJ02_RS00820;old_locus_tag=CYJ02_00820;pseudo=true NZ_PJUQ01000001.1 Protein Homology CDS 167247 167887 . + 0 ID=cds-CYJ02_RS00820;Parent=gene-CYJ02_RS00820;Note=frameshifted;Ontology_term=GO:0043953,GO:0065002,GO:0009977,GO:0016020,GO:0033281;gbkey=CDS;gene=tatC;go_component=membrane|0016020||IEA,TAT protein transport complex|0033281||IEA;go_function=proton motive force dependent protein transmembrane transporter activity|0009977||IEA;go_process=protein transport by the Tat complex|0043953||IEA,intracellular protein transmembrane transport|0065002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166267.1;locus_tag=CYJ02_RS00820;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 167930 169588 . - . ID=gene-CYJ02_RS00825;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CYJ02_RS00825;old_locus_tag=CYJ02_00825 NZ_PJUQ01000001.1 Protein Homology CDS 167930 169588 . - 0 ID=cds-WP_096548178.1;Parent=gene-CYJ02_RS00825;Dbxref=GenBank:WP_096548178.1;Name=WP_096548178.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CYJ02_RS00825;product=arginine--tRNA ligase;protein_id=WP_096548178.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 169590 170000 . - . ID=gene-CYJ02_RS00830;Name=CYJ02_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00830;old_locus_tag=CYJ02_00830 NZ_PJUQ01000001.1 Protein Homology CDS 169590 170000 . - 0 ID=cds-WP_014614667.1;Parent=gene-CYJ02_RS00830;Dbxref=GenBank:WP_014614667.1;Name=WP_014614667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220024.1;locus_tag=CYJ02_RS00830;product=YwiB family protein;protein_id=WP_014614667.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 170215 170730 . - . ID=gene-CYJ02_RS00835;Name=CYJ02_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00835;old_locus_tag=CYJ02_00835 NZ_PJUQ01000001.1 Protein Homology CDS 170215 170730 . - 0 ID=cds-WP_014614668.1;Parent=gene-CYJ02_RS00835;Dbxref=GenBank:WP_014614668.1;Name=WP_014614668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166270.1;locus_tag=CYJ02_RS00835;product=YwhD family protein;protein_id=WP_014614668.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 170808 172106 . - . ID=gene-CYJ02_RS00840;Name=CYJ02_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00840;old_locus_tag=CYJ02_00840 NZ_PJUQ01000001.1 Protein Homology CDS 170808 172106 . - 0 ID=cds-WP_015728676.1;Parent=gene-CYJ02_RS00840;Dbxref=GenBank:WP_015728676.1;Name=WP_015728676.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=CYJ02_RS00840;product=HD domain-containing protein;protein_id=WP_015728676.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 172129 172608 . - . ID=gene-CYJ02_RS00845;Name=CYJ02_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00845;old_locus_tag=CYJ02_00845 NZ_PJUQ01000001.1 Protein Homology CDS 172129 172608 . - 0 ID=cds-WP_014614670.1;Parent=gene-CYJ02_RS00845;Dbxref=GenBank:WP_014614670.1;Name=WP_014614670.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=CYJ02_RS00845;product=GNAT family N-acetyltransferase;protein_id=WP_014614670.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 173018 173353 . - . ID=gene-CYJ02_RS00850;Name=CYJ02_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00850;old_locus_tag=CYJ02_00850 NZ_PJUQ01000001.1 Protein Homology CDS 173018 173353 . - 0 ID=cds-WP_014614671.1;Parent=gene-CYJ02_RS00850;Dbxref=GenBank:WP_014614671.1;Name=WP_014614671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220022.1;locus_tag=CYJ02_RS00850;product=YuzB family protein;protein_id=WP_014614671.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 173975 174691 . + . ID=gene-CYJ02_RS00855;Name=CYJ02_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00855;old_locus_tag=CYJ02_00855 NZ_PJUQ01000001.1 Protein Homology CDS 173975 174691 . + 0 ID=cds-WP_101431248.1;Parent=gene-CYJ02_RS00855;Dbxref=GenBank:WP_101431248.1;Name=WP_101431248.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614672.1;locus_tag=CYJ02_RS00855;product=trypsin-like serine peptidase;protein_id=WP_101431248.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 174858 175583 . + . ID=gene-CYJ02_RS00860;Name=CYJ02_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00860;old_locus_tag=CYJ02_00860 NZ_PJUQ01000001.1 Protein Homology CDS 174858 175583 . + 0 ID=cds-WP_070407488.1;Parent=gene-CYJ02_RS00860;Dbxref=GenBank:WP_070407488.1;Name=WP_070407488.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728675.1;locus_tag=CYJ02_RS00860;product=trypsin-like serine peptidase;protein_id=WP_070407488.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 175906 176628 . + . ID=gene-CYJ02_RS00865;Name=CYJ02_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00865;old_locus_tag=CYJ02_00865 NZ_PJUQ01000001.1 Protein Homology CDS 175906 176628 . + 0 ID=cds-WP_065354557.1;Parent=gene-CYJ02_RS00865;Dbxref=GenBank:WP_065354557.1;Name=WP_065354557.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728674.1;locus_tag=CYJ02_RS00865;product=trypsin-like serine peptidase;protein_id=WP_065354557.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 176961 177668 . + . ID=gene-CYJ02_RS00870;Name=CYJ02_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00870;old_locus_tag=CYJ02_00870 NZ_PJUQ01000001.1 Protein Homology CDS 176961 177668 . + 0 ID=cds-WP_101431249.1;Parent=gene-CYJ02_RS00870;Dbxref=GenBank:WP_101431249.1;Name=WP_101431249.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614674.1;locus_tag=CYJ02_RS00870;product=trypsin-like serine peptidase;protein_id=WP_101431249.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 178026 178781 . + . ID=gene-CYJ02_RS00875;Name=CYJ02_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00875;old_locus_tag=CYJ02_00875 NZ_PJUQ01000001.1 Protein Homology CDS 178026 178781 . + 0 ID=cds-WP_014614675.1;Parent=gene-CYJ02_RS00875;Dbxref=GenBank:WP_014614675.1;Name=WP_014614675.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614675.1;locus_tag=CYJ02_RS00875;product=trypsin-like serine peptidase;protein_id=WP_014614675.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 179144 179902 . + . ID=gene-CYJ02_RS00880;Name=CYJ02_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00880;old_locus_tag=CYJ02_00880 NZ_PJUQ01000001.1 Protein Homology CDS 179144 179902 . + 0 ID=cds-WP_101431250.1;Parent=gene-CYJ02_RS00880;Dbxref=GenBank:WP_101431250.1;Name=WP_101431250.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614676.1;locus_tag=CYJ02_RS00880;product=trypsin-like serine peptidase;protein_id=WP_101431250.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 180105 180815 . + . ID=gene-CYJ02_RS00885;Name=CYJ02_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00885;old_locus_tag=CYJ02_00885 NZ_PJUQ01000001.1 Protein Homology CDS 180105 180815 . + 0 ID=cds-WP_101431251.1;Parent=gene-CYJ02_RS00885;Dbxref=GenBank:WP_101431251.1;Name=WP_101431251.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614677.1;locus_tag=CYJ02_RS00885;product=trypsin-like serine peptidase;protein_id=WP_101431251.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 181035 181742 . + . ID=gene-CYJ02_RS00890;Name=CYJ02_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00890;old_locus_tag=CYJ02_00890 NZ_PJUQ01000001.1 Protein Homology CDS 181035 181742 . + 0 ID=cds-WP_101431252.1;Parent=gene-CYJ02_RS00890;Dbxref=GenBank:WP_101431252.1;Name=WP_101431252.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728669.1;locus_tag=CYJ02_RS00890;product=trypsin-like serine peptidase;protein_id=WP_101431252.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 181965 182684 . + . ID=gene-CYJ02_RS00895;Name=CYJ02_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00895;old_locus_tag=CYJ02_00895 NZ_PJUQ01000001.1 Protein Homology CDS 181965 182684 . + 0 ID=cds-WP_101431253.1;Parent=gene-CYJ02_RS00895;Dbxref=GenBank:WP_101431253.1;Name=WP_101431253.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728668.1;locus_tag=CYJ02_RS00895;product=trypsin-like serine peptidase;protein_id=WP_101431253.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 182890 183600 . + . ID=gene-CYJ02_RS00900;Name=CYJ02_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00900;old_locus_tag=CYJ02_00900 NZ_PJUQ01000001.1 Protein Homology CDS 182890 183600 . + 0 ID=cds-WP_063278857.1;Parent=gene-CYJ02_RS00900;Dbxref=GenBank:WP_063278857.1;Name=WP_063278857.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614679.1;locus_tag=CYJ02_RS00900;product=trypsin-like serine peptidase;protein_id=WP_063278857.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 183744 184349 . - . ID=gene-CYJ02_RS00905;Name=CYJ02_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00905;old_locus_tag=CYJ02_00905 NZ_PJUQ01000001.1 Protein Homology CDS 183744 184349 . - 0 ID=cds-WP_015728666.1;Parent=gene-CYJ02_RS00905;Dbxref=GenBank:WP_015728666.1;Name=WP_015728666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728666.1;locus_tag=CYJ02_RS00905;product=DUF2812 domain-containing protein;protein_id=WP_015728666.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 184333 184665 . - . ID=gene-CYJ02_RS00910;Name=CYJ02_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00910;old_locus_tag=CYJ02_00910 NZ_PJUQ01000001.1 Protein Homology CDS 184333 184665 . - 0 ID=cds-WP_015728665.1;Parent=gene-CYJ02_RS00910;Dbxref=GenBank:WP_015728665.1;Name=WP_015728665.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614681.1;locus_tag=CYJ02_RS00910;product=PadR family transcriptional regulator;protein_id=WP_015728665.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 184818 186359 . - . ID=gene-CYJ02_RS00915;Name=CYJ02_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00915;old_locus_tag=CYJ02_00915 NZ_PJUQ01000001.1 Protein Homology CDS 184818 186359 . - 0 ID=cds-WP_101431254.1;Parent=gene-CYJ02_RS00915;Dbxref=GenBank:WP_101431254.1;Name=WP_101431254.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166288.1;locus_tag=CYJ02_RS00915;product=SLC13 family permease;protein_id=WP_101431254.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 186939 187400 . - . ID=gene-CYJ02_RS00920;Name=CYJ02_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00920;old_locus_tag=CYJ02_00920 NZ_PJUQ01000001.1 Protein Homology CDS 186939 187400 . - 0 ID=cds-WP_014614683.1;Parent=gene-CYJ02_RS00920;Dbxref=GenBank:WP_014614683.1;Name=WP_014614683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166289.1;locus_tag=CYJ02_RS00920;product=threonine/serine exporter family protein;protein_id=WP_014614683.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 187413 188168 . - . ID=gene-CYJ02_RS00925;Name=CYJ02_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00925;old_locus_tag=CYJ02_00925 NZ_PJUQ01000001.1 Protein Homology CDS 187413 188168 . - 0 ID=cds-WP_014614684.1;Parent=gene-CYJ02_RS00925;Dbxref=GenBank:WP_014614684.1;Name=WP_014614684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614684.1;locus_tag=CYJ02_RS00925;product=threonine/serine exporter family protein;protein_id=WP_014614684.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq pseudogene 188409 188672 . + . ID=gene-CYJ02_RS12975;Name=CYJ02_RS12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12975;old_locus_tag=CYJ02_00930;pseudo=true NZ_PJUQ01000001.1 Protein Homology CDS 188409 188672 . + 0 ID=cds-CYJ02_RS12975;Parent=gene-CYJ02_RS12975;Note=frameshifted%3B internal stop;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477818.1;locus_tag=CYJ02_RS12975;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 188669 189007 . + . ID=gene-CYJ02_RS00935;Name=CYJ02_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00935;old_locus_tag=CYJ02_00935 NZ_PJUQ01000001.1 Protein Homology CDS 188669 189007 . + 0 ID=cds-WP_014614686.1;Parent=gene-CYJ02_RS00935;Dbxref=GenBank:WP_014614686.1;Name=WP_014614686.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614686.1;locus_tag=CYJ02_RS00935;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014614686.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 189215 189970 . - . ID=gene-CYJ02_RS00940;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS00940;old_locus_tag=CYJ02_00940 NZ_PJUQ01000001.1 Protein Homology CDS 189215 189970 . - 0 ID=cds-WP_014614687.1;Parent=gene-CYJ02_RS00940;Dbxref=GenBank:WP_014614687.1;Name=WP_014614687.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614687.1;locus_tag=CYJ02_RS00940;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_014614687.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 190138 191127 . + . ID=gene-CYJ02_RS00945;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CYJ02_RS00945;old_locus_tag=CYJ02_00945 NZ_PJUQ01000001.1 Protein Homology CDS 190138 191127 . + 0 ID=cds-WP_014614688.1;Parent=gene-CYJ02_RS00945;Dbxref=GenBank:WP_014614688.1;Name=WP_014614688.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=CYJ02_RS00945;product=phosphate acetyltransferase;protein_id=WP_014614688.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 191127 191963 . + . ID=gene-CYJ02_RS00950;Name=CYJ02_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00950;old_locus_tag=CYJ02_00950 NZ_PJUQ01000001.1 Protein Homology CDS 191127 191963 . + 0 ID=cds-WP_101431255.1;Parent=gene-CYJ02_RS00950;Dbxref=GenBank:WP_101431255.1;Name=WP_101431255.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=CYJ02_RS00950;product=lipoate--protein ligase family protein;protein_id=WP_101431255.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq pseudogene 192117 192320 . - . ID=gene-CYJ02_RS00955;Name=CYJ02_RS00955;end_range=192320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS00955;old_locus_tag=CYJ02_00955;partial=true;pseudo=true NZ_PJUQ01000001.1 Protein Homology CDS 192117 192320 . - 0 ID=cds-CYJ02_RS00955;Parent=gene-CYJ02_RS00955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=192320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003513861.1;locus_tag=CYJ02_RS00955;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 192570 192908 . + . ID=gene-CYJ02_RS12290;Name=CYJ02_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12290 NZ_PJUQ01000001.1 Protein Homology CDS 192570 192908 . + 0 ID=cds-WP_257976450.1;Parent=gene-CYJ02_RS12290;Dbxref=GenBank:WP_257976450.1;Name=WP_257976450.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.7;locus_tag=CYJ02_RS12290;product=S8 family serine peptidase;protein_id=WP_257976450.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 192911 193657 . + . ID=gene-CYJ02_RS00960;Name=CYJ02_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00960;old_locus_tag=CYJ02_00960 NZ_PJUQ01000001.1 Protein Homology CDS 192911 193657 . + 0 ID=cds-WP_101431256.1;Parent=gene-CYJ02_RS00960;Dbxref=GenBank:WP_101431256.1;Name=WP_101431256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039645025.1;locus_tag=CYJ02_RS00960;product=SAR2788 family putative toxin;protein_id=WP_101431256.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 193660 194133 . + . ID=gene-CYJ02_RS00965;Name=CYJ02_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00965;old_locus_tag=CYJ02_00965 NZ_PJUQ01000001.1 Protein Homology CDS 193660 194133 . + 0 ID=cds-WP_014614693.1;Parent=gene-CYJ02_RS00965;Dbxref=GenBank:WP_014614693.1;Name=WP_014614693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614693.1;locus_tag=CYJ02_RS00965;product=hypothetical protein;protein_id=WP_014614693.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 194433 194837 . - . ID=gene-CYJ02_RS00970;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CYJ02_RS00970;old_locus_tag=CYJ02_00970 NZ_PJUQ01000001.1 Protein Homology CDS 194433 194837 . - 0 ID=cds-WP_014614694.1;Parent=gene-CYJ02_RS00970;Dbxref=GenBank:WP_014614694.1;Name=WP_014614694.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614694.1;locus_tag=CYJ02_RS00970;product=arsenate reductase (thioredoxin);protein_id=WP_014614694.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 194853 196142 . - . ID=gene-CYJ02_RS00975;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=CYJ02_RS00975;old_locus_tag=CYJ02_00975 NZ_PJUQ01000001.1 Protein Homology CDS 194853 196142 . - 0 ID=cds-WP_015728657.1;Parent=gene-CYJ02_RS00975;Dbxref=GenBank:WP_015728657.1;Name=WP_015728657.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304041.1;locus_tag=CYJ02_RS00975;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_015728657.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 196139 196459 . - . ID=gene-CYJ02_RS00980;Name=CYJ02_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00980;old_locus_tag=CYJ02_00980 NZ_PJUQ01000001.1 Protein Homology CDS 196139 196459 . - 0 ID=cds-WP_014614696.1;Parent=gene-CYJ02_RS00980;Dbxref=GenBank:WP_014614696.1;Name=WP_014614696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614696.1;locus_tag=CYJ02_RS00980;product=ArsR/SmtB family transcription factor;protein_id=WP_014614696.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 197472 198602 . - . ID=gene-CYJ02_RS00985;Name=CYJ02_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00985;old_locus_tag=CYJ02_00985 NZ_PJUQ01000001.1 Protein Homology CDS 197472 198602 . - 0 ID=cds-WP_101431257.1;Parent=gene-CYJ02_RS00985;Dbxref=GenBank:WP_101431257.1;Name=WP_101431257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612982.1;locus_tag=CYJ02_RS00985;product=sugar diacid recognition domain-containing protein;protein_id=WP_101431257.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 199380 200369 . - . ID=gene-CYJ02_RS00990;Name=CYJ02_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00990;old_locus_tag=CYJ02_00990 NZ_PJUQ01000001.1 Protein Homology CDS 199380 200369 . - 0 ID=cds-WP_101431258.1;Parent=gene-CYJ02_RS00990;Dbxref=GenBank:WP_101431258.1;Name=WP_101431258.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167214.1;locus_tag=CYJ02_RS00990;product=YeiH family protein;protein_id=WP_101431258.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 200603 202249 . + . ID=gene-CYJ02_RS00995;Name=CYJ02_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS00995;old_locus_tag=CYJ02_00995 NZ_PJUQ01000001.1 Protein Homology CDS 200603 202249 . + 0 ID=cds-WP_014612984.1;Parent=gene-CYJ02_RS00995;Dbxref=GenBank:WP_014612984.1;Name=WP_014612984.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166658.1;locus_tag=CYJ02_RS00995;product=alpha-keto acid decarboxylase family protein;protein_id=WP_014612984.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 203339 204742 . + . ID=gene-CYJ02_RS01000;Name=CYJ02_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01000;old_locus_tag=CYJ02_01000 NZ_PJUQ01000001.1 Protein Homology CDS 203339 204742 . + 0 ID=cds-WP_014612985.1;Parent=gene-CYJ02_RS01000;Dbxref=GenBank:WP_014612985.1;Name=WP_014612985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=CYJ02_RS01000;product=anthranilate synthase component I;protein_id=WP_014612985.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 204739 205323 . + . ID=gene-CYJ02_RS01005;Name=CYJ02_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01005;old_locus_tag=CYJ02_01005 NZ_PJUQ01000001.1 Protein Homology CDS 204739 205323 . + 0 ID=cds-WP_037542279.1;Parent=gene-CYJ02_RS01005;Dbxref=GenBank:WP_037542279.1;Name=WP_037542279.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=CYJ02_RS01005;product=anthranilate synthase component II;protein_id=WP_037542279.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 205307 206311 . + . ID=gene-CYJ02_RS01010;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01010;old_locus_tag=CYJ02_01010 NZ_PJUQ01000001.1 Protein Homology CDS 205307 206311 . + 0 ID=cds-WP_014612987.1;Parent=gene-CYJ02_RS01010;Dbxref=GenBank:WP_014612987.1;Name=WP_014612987.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612987.1;locus_tag=CYJ02_RS01010;product=anthranilate phosphoribosyltransferase;protein_id=WP_014612987.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 206308 207087 . + . ID=gene-CYJ02_RS01015;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01015;old_locus_tag=CYJ02_01015 NZ_PJUQ01000001.1 Protein Homology CDS 206308 207087 . + 0 ID=cds-WP_101431259.1;Parent=gene-CYJ02_RS01015;Dbxref=GenBank:WP_101431259.1;Name=WP_101431259.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612988.1;locus_tag=CYJ02_RS01015;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_101431259.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 207089 207712 . + . ID=gene-CYJ02_RS01020;Name=CYJ02_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01020;old_locus_tag=CYJ02_01020 NZ_PJUQ01000001.1 Protein Homology CDS 207089 207712 . + 0 ID=cds-WP_015729626.1;Parent=gene-CYJ02_RS01020;Dbxref=GenBank:WP_015729626.1;Name=WP_015729626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=CYJ02_RS01020;product=phosphoribosylanthranilate isomerase;protein_id=WP_015729626.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 207715 208920 . + . ID=gene-CYJ02_RS01025;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01025;old_locus_tag=CYJ02_01025 NZ_PJUQ01000001.1 Protein Homology CDS 207715 208920 . + 0 ID=cds-WP_015729625.1;Parent=gene-CYJ02_RS01025;Dbxref=GenBank:WP_015729625.1;Name=WP_015729625.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219476.1;locus_tag=CYJ02_RS01025;product=tryptophan synthase subunit beta;protein_id=WP_015729625.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 208923 209672 . + . ID=gene-CYJ02_RS01030;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01030;old_locus_tag=CYJ02_01030 NZ_PJUQ01000001.1 Protein Homology CDS 208923 209672 . + 0 ID=cds-WP_100006648.1;Parent=gene-CYJ02_RS01030;Dbxref=GenBank:WP_100006648.1;Name=WP_100006648.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729624.1;locus_tag=CYJ02_RS01030;product=tryptophan synthase subunit alpha;protein_id=WP_100006648.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 209792 210502 . + . ID=gene-CYJ02_RS01035;Name=CYJ02_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01035;old_locus_tag=CYJ02_01035 NZ_PJUQ01000001.1 Protein Homology CDS 209792 210502 . + 0 ID=cds-WP_099987154.1;Parent=gene-CYJ02_RS01035;Dbxref=GenBank:WP_099987154.1;Name=WP_099987154.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=CYJ02_RS01035;product=HAD family hydrolase;protein_id=WP_099987154.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 210960 211688 . + . ID=gene-CYJ02_RS01040;Name=CYJ02_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01040;old_locus_tag=CYJ02_01040 NZ_PJUQ01000001.1 Protein Homology CDS 210960 211688 . + 0 ID=cds-WP_014612993.1;Parent=gene-CYJ02_RS01040;Dbxref=GenBank:WP_014612993.1;Name=WP_014612993.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165919.1;locus_tag=CYJ02_RS01040;product=S1 family peptidase;protein_id=WP_014612993.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 211979 212407 . - . ID=gene-CYJ02_RS01045;Name=CYJ02_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01045;old_locus_tag=CYJ02_01045 NZ_PJUQ01000001.1 Protein Homology CDS 211979 212407 . - 0 ID=cds-WP_014612994.1;Parent=gene-CYJ02_RS01045;Dbxref=GenBank:WP_014612994.1;Name=WP_014612994.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=CYJ02_RS01045;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_014612994.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 212628 214049 . + . ID=gene-CYJ02_RS01050;Name=CYJ02_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01050;old_locus_tag=CYJ02_01050 NZ_PJUQ01000001.1 Protein Homology CDS 212628 214049 . + 0 ID=cds-WP_101431260.1;Parent=gene-CYJ02_RS01050;Dbxref=GenBank:WP_101431260.1;Name=WP_101431260.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165921.1;locus_tag=CYJ02_RS01050;product=FAD-binding oxidoreductase;protein_id=WP_101431260.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 214039 215319 . + . ID=gene-CYJ02_RS01055;Name=CYJ02_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01055;old_locus_tag=CYJ02_01055 NZ_PJUQ01000001.1 Protein Homology CDS 214039 215319 . + 0 ID=cds-WP_101431261.1;Parent=gene-CYJ02_RS01055;Dbxref=GenBank:WP_101431261.1;Name=WP_101431261.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612996.1;locus_tag=CYJ02_RS01055;product=(Fe-S)-binding protein;protein_id=WP_101431261.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 215475 217268 . + . ID=gene-CYJ02_RS01060;Name=CYJ02_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01060;old_locus_tag=CYJ02_01060 NZ_PJUQ01000001.1 Protein Homology CDS 215475 217268 . + 0 ID=cds-WP_014612997.1;Parent=gene-CYJ02_RS01060;Dbxref=GenBank:WP_014612997.1;Name=WP_014612997.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165924.1;locus_tag=CYJ02_RS01060;product=ABC transporter ATP-binding protein;protein_id=WP_014612997.1;transl_table=11 NZ_PJUQ01000001.1 RefSeq gene 217249 219027 . + . ID=gene-CYJ02_RS01065;Name=CYJ02_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01065;old_locus_tag=CYJ02_01065 NZ_PJUQ01000001.1 Protein Homology CDS 217249 219027 . + 0 ID=cds-WP_101431262.1;Parent=gene-CYJ02_RS01065;Dbxref=GenBank:WP_101431262.1;Name=WP_101431262.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612998.1;locus_tag=CYJ02_RS01065;product=ABC transporter ATP-binding protein;protein_id=WP_101431262.1;transl_table=11 ##sequence-region NZ_PJUQ01000010.1 1 95403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000010.1 RefSeq region 1 95403 . + . ID=NZ_PJUQ01000010.1:1..95403;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000010.1 RefSeq gene 88 969 . - . ID=gene-CYJ02_RS06330;Name=CYJ02_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06330;old_locus_tag=CYJ02_06330 NZ_PJUQ01000010.1 Protein Homology CDS 88 969 . - 0 ID=cds-WP_101431492.1;Parent=gene-CYJ02_RS06330;Dbxref=GenBank:WP_101431492.1;Name=WP_101431492.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498885.1;locus_tag=CYJ02_RS06330;product=N-acetylneuraminate lyase;protein_id=WP_101431492.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 1127 1798 . + . ID=gene-CYJ02_RS06335;Name=CYJ02_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06335;old_locus_tag=CYJ02_06335 NZ_PJUQ01000010.1 Protein Homology CDS 1127 1798 . + 0 ID=cds-WP_014613176.1;Parent=gene-CYJ02_RS06335;Dbxref=GenBank:WP_014613176.1;Name=WP_014613176.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166584.1;locus_tag=CYJ02_RS06335;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613176.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 1779 2642 . + . ID=gene-CYJ02_RS06340;Name=CYJ02_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06340;old_locus_tag=CYJ02_06340 NZ_PJUQ01000010.1 Protein Homology CDS 1779 2642 . + 0 ID=cds-WP_015729533.1;Parent=gene-CYJ02_RS06340;Dbxref=GenBank:WP_015729533.1;Name=WP_015729533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613177.1;locus_tag=CYJ02_RS06340;product=ROK family protein;protein_id=WP_015729533.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 2723 3283 . + . ID=gene-CYJ02_RS06345;Name=CYJ02_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06345;old_locus_tag=CYJ02_06345 NZ_PJUQ01000010.1 Protein Homology CDS 2723 3283 . + 0 ID=cds-WP_014613178.1;Parent=gene-CYJ02_RS06345;Dbxref=GenBank:WP_014613178.1;Name=WP_014613178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=CYJ02_RS06345;product=biotin transporter BioY;protein_id=WP_014613178.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 3306 4079 . + . ID=gene-CYJ02_RS06350;Name=CYJ02_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06350;old_locus_tag=CYJ02_06350 NZ_PJUQ01000010.1 Protein Homology CDS 3306 4079 . + 0 ID=cds-WP_101431493.1;Parent=gene-CYJ02_RS06350;Dbxref=GenBank:WP_101431493.1;Name=WP_101431493.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729531.1;locus_tag=CYJ02_RS06350;product=GNAT family N-acetyltransferase;protein_id=WP_101431493.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 4392 5165 . + . ID=gene-CYJ02_RS06355;Name=CYJ02_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06355;old_locus_tag=CYJ02_06355 NZ_PJUQ01000010.1 Protein Homology CDS 4392 5165 . + 0 ID=cds-WP_101431494.1;Parent=gene-CYJ02_RS06355;Dbxref=GenBank:WP_101431494.1;Name=WP_101431494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729531.1;locus_tag=CYJ02_RS06355;product=GNAT family N-acetyltransferase;protein_id=WP_101431494.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 5214 6011 . - . ID=gene-CYJ02_RS06360;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06360;old_locus_tag=CYJ02_06360 NZ_PJUQ01000010.1 Protein Homology CDS 5214 6011 . - 0 ID=cds-WP_015729530.1;Parent=gene-CYJ02_RS06360;Dbxref=GenBank:WP_015729530.1;Name=WP_015729530.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729530.1;locus_tag=CYJ02_RS06360;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_015729530.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 6170 7204 . + . ID=gene-CYJ02_RS06365;Name=CYJ02_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06365;old_locus_tag=CYJ02_06365 NZ_PJUQ01000010.1 Protein Homology CDS 6170 7204 . + 0 ID=cds-WP_081335098.1;Parent=gene-CYJ02_RS06365;Dbxref=GenBank:WP_081335098.1;Name=WP_081335098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220286.1;locus_tag=CYJ02_RS06365;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_081335098.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 7247 8413 . + . ID=gene-CYJ02_RS06370;Name=CYJ02_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06370;old_locus_tag=CYJ02_06370 NZ_PJUQ01000010.1 Protein Homology CDS 7247 8413 . + 0 ID=cds-WP_101431495.1;Parent=gene-CYJ02_RS06370;Dbxref=GenBank:WP_101431495.1;Name=WP_101431495.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729528.1;locus_tag=CYJ02_RS06370;product=galactokinase;protein_id=WP_101431495.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 8429 9421 . + . ID=gene-CYJ02_RS06375;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CYJ02_RS06375;old_locus_tag=CYJ02_06375 NZ_PJUQ01000010.1 Protein Homology CDS 8429 9421 . + 0 ID=cds-WP_101431496.1;Parent=gene-CYJ02_RS06375;Dbxref=GenBank:WP_101431496.1;Name=WP_101431496.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613183.1;locus_tag=CYJ02_RS06375;product=UDP-glucose 4-epimerase GalE;protein_id=WP_101431496.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 9434 10933 . + . ID=gene-CYJ02_RS06380;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CYJ02_RS06380;old_locus_tag=CYJ02_06380 NZ_PJUQ01000010.1 Protein Homology CDS 9434 10933 . + 0 ID=cds-WP_101431497.1;Parent=gene-CYJ02_RS06380;Dbxref=GenBank:WP_101431497.1;Name=WP_101431497.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729526.1;locus_tag=CYJ02_RS06380;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_101431497.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 11024 11797 . + . ID=gene-CYJ02_RS06385;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06385;old_locus_tag=CYJ02_06385 NZ_PJUQ01000010.1 Protein Homology CDS 11024 11797 . + 0 ID=cds-WP_070407683.1;Parent=gene-CYJ02_RS06385;Dbxref=GenBank:WP_070407683.1;Name=WP_070407683.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=CYJ02_RS06385;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_070407683.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 11807 12478 . + . ID=gene-CYJ02_RS06390;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06390;old_locus_tag=CYJ02_06390 NZ_PJUQ01000010.1 Protein Homology CDS 11807 12478 . + 0 ID=cds-WP_070407682.1;Parent=gene-CYJ02_RS06390;Dbxref=GenBank:WP_070407682.1;Name=WP_070407682.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832420.1;locus_tag=CYJ02_RS06390;product=molybdate ABC transporter permease subunit;protein_id=WP_070407682.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 12479 13084 . + . ID=gene-CYJ02_RS06395;Name=CYJ02_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06395;old_locus_tag=CYJ02_06395 NZ_PJUQ01000010.1 Protein Homology CDS 12479 13084 . + 0 ID=cds-WP_014613187.1;Parent=gene-CYJ02_RS06395;Dbxref=GenBank:WP_014613187.1;Name=WP_014613187.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=CYJ02_RS06395;product=ATP-binding cassette domain-containing protein;protein_id=WP_014613187.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 13376 14380 . + . ID=gene-CYJ02_RS06400;Name=CYJ02_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06400;old_locus_tag=CYJ02_06400 NZ_PJUQ01000010.1 Protein Homology CDS 13376 14380 . + 0 ID=cds-WP_063279011.1;Parent=gene-CYJ02_RS06400;Dbxref=GenBank:WP_063279011.1;Name=WP_063279011.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431689.1;locus_tag=CYJ02_RS06400;product=ThiF family adenylyltransferase;protein_id=WP_063279011.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 14396 14896 . + . ID=gene-CYJ02_RS06405;Name=CYJ02_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06405;old_locus_tag=CYJ02_06405 NZ_PJUQ01000010.1 Protein Homology CDS 14396 14896 . + 0 ID=cds-WP_014613189.1;Parent=gene-CYJ02_RS06405;Dbxref=GenBank:WP_014613189.1;Name=WP_014613189.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613189.1;locus_tag=CYJ02_RS06405;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_014613189.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 15156 15641 . - . ID=gene-CYJ02_RS06410;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06410;old_locus_tag=CYJ02_06410 NZ_PJUQ01000010.1 Protein Homology CDS 15156 15641 . - 0 ID=cds-WP_014613190.1;Parent=gene-CYJ02_RS06410;Dbxref=GenBank:WP_014613190.1;Name=WP_014613190.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166598.1;locus_tag=CYJ02_RS06410;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_014613190.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 15712 16971 . + . ID=gene-CYJ02_RS06415;Name=CYJ02_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06415;old_locus_tag=CYJ02_06415 NZ_PJUQ01000010.1 Protein Homology CDS 15712 16971 . + 0 ID=cds-WP_037542418.1;Parent=gene-CYJ02_RS06415;Dbxref=GenBank:WP_037542418.1;Name=WP_037542418.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729524.1;locus_tag=CYJ02_RS06415;product=molybdopterin molybdotransferase MoeA;protein_id=WP_037542418.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 16968 17444 . + . ID=gene-CYJ02_RS06420;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06420;old_locus_tag=CYJ02_06420 NZ_PJUQ01000010.1 Protein Homology CDS 16968 17444 . + 0 ID=cds-WP_099986760.1;Parent=gene-CYJ02_RS06420;Dbxref=GenBank:WP_099986760.1;Name=WP_099986760.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613192.1;locus_tag=CYJ02_RS06420;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_099986760.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 17450 17908 . + . ID=gene-CYJ02_RS06425;Name=CYJ02_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06425;old_locus_tag=CYJ02_06425 NZ_PJUQ01000010.1 Protein Homology CDS 17450 17908 . + 0 ID=cds-WP_014613193.1;Parent=gene-CYJ02_RS06425;Dbxref=GenBank:WP_014613193.1;Name=WP_014613193.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613193.1;locus_tag=CYJ02_RS06425;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_014613193.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 17905 18138 . + . ID=gene-CYJ02_RS06430;Name=CYJ02_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06430;old_locus_tag=CYJ02_06430 NZ_PJUQ01000010.1 Protein Homology CDS 17905 18138 . + 0 ID=cds-WP_014613194.1;Parent=gene-CYJ02_RS06430;Dbxref=GenBank:WP_014613194.1;Name=WP_014613194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=CYJ02_RS06430;product=MoaD/ThiS family protein;protein_id=WP_014613194.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 18148 18753 . + . ID=gene-CYJ02_RS06435;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06435;old_locus_tag=CYJ02_06435 NZ_PJUQ01000010.1 Protein Homology CDS 18148 18753 . + 0 ID=cds-WP_014613195.1;Parent=gene-CYJ02_RS06435;Dbxref=GenBank:WP_014613195.1;Name=WP_014613195.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613195.1;locus_tag=CYJ02_RS06435;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_014613195.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 18770 19792 . + . ID=gene-CYJ02_RS06440;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06440;old_locus_tag=CYJ02_06440 NZ_PJUQ01000010.1 Protein Homology CDS 18770 19792 . + 0 ID=cds-WP_037542424.1;Parent=gene-CYJ02_RS06440;Dbxref=GenBank:WP_037542424.1;Name=WP_037542424.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CYJ02_RS06440;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_037542424.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 19869 21740 . - . ID=gene-CYJ02_RS06445;Name=CYJ02_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06445;old_locus_tag=CYJ02_06445 NZ_PJUQ01000010.1 Protein Homology CDS 19869 21740 . - 0 ID=cds-WP_101431498.1;Parent=gene-CYJ02_RS06445;Dbxref=GenBank:WP_101431498.1;Name=WP_101431498.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=CYJ02_RS06445;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_101431498.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 22236 22682 . - . ID=gene-CYJ02_RS06450;Name=CYJ02_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06450;old_locus_tag=CYJ02_06450 NZ_PJUQ01000010.1 Protein Homology CDS 22236 22682 . - 0 ID=cds-WP_014613198.1;Parent=gene-CYJ02_RS06450;Dbxref=GenBank:WP_014613198.1;Name=WP_014613198.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220116.1;locus_tag=CYJ02_RS06450;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613198.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 22856 23623 . + . ID=gene-CYJ02_RS06455;Name=CYJ02_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06455;old_locus_tag=CYJ02_06455 NZ_PJUQ01000010.1 Protein Homology CDS 22856 23623 . + 0 ID=cds-WP_101431499.1;Parent=gene-CYJ02_RS06455;Dbxref=GenBank:WP_101431499.1;Name=WP_101431499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169683.1;locus_tag=CYJ02_RS06455;product=VOC family protein;protein_id=WP_101431499.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 23614 23868 . - . ID=gene-CYJ02_RS06460;Name=CYJ02_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06460;old_locus_tag=CYJ02_06460 NZ_PJUQ01000010.1 Protein Homology CDS 23614 23868 . - 0 ID=cds-WP_014613200.1;Parent=gene-CYJ02_RS06460;Dbxref=GenBank:WP_014613200.1;Name=WP_014613200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166608.1;locus_tag=CYJ02_RS06460;product=hypothetical protein;protein_id=WP_014613200.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 23985 25265 . + . ID=gene-CYJ02_RS06465;Name=CYJ02_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06465;old_locus_tag=CYJ02_06465 NZ_PJUQ01000010.1 Protein Homology CDS 23985 25265 . + 0 ID=cds-WP_020220115.1;Parent=gene-CYJ02_RS06465;Dbxref=GenBank:WP_020220115.1;Name=WP_020220115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220115.1;locus_tag=CYJ02_RS06465;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_020220115.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 25484 28636 . + . ID=gene-CYJ02_RS06470;Name=CYJ02_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06470;old_locus_tag=CYJ02_06470 NZ_PJUQ01000010.1 Protein Homology CDS 25484 28636 . + 0 ID=cds-WP_101431500.1;Parent=gene-CYJ02_RS06470;Dbxref=GenBank:WP_101431500.1;Name=WP_101431500.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=CYJ02_RS06470;product=efflux RND transporter permease subunit;protein_id=WP_101431500.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 28840 29997 . + . ID=gene-CYJ02_RS06475;Name=CYJ02_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06475;old_locus_tag=CYJ02_06475 NZ_PJUQ01000010.1 Protein Homology CDS 28840 29997 . + 0 ID=cds-WP_101431501.1;Parent=gene-CYJ02_RS06475;Dbxref=GenBank:WP_101431501.1;Name=WP_101431501.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613203.1;locus_tag=CYJ02_RS06475;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101431501.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 30137 30454 . - . ID=gene-CYJ02_RS06480;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06480;old_locus_tag=CYJ02_06480 NZ_PJUQ01000010.1 Protein Homology CDS 30137 30454 . - 0 ID=cds-WP_014613204.1;Parent=gene-CYJ02_RS06480;Dbxref=GenBank:WP_014613204.1;Name=WP_014613204.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=CYJ02_RS06480;product=membrane stabilizing protein MspA;protein_id=WP_014613204.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 30524 30694 . - . ID=gene-CYJ02_RS12505;Name=CYJ02_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12505 NZ_PJUQ01000010.1 Protein Homology CDS 30524 30694 . - 0 ID=cds-WP_014613205.1;Parent=gene-CYJ02_RS12505;Dbxref=GenBank:WP_014613205.1;Name=WP_014613205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613205.1;locus_tag=CYJ02_RS12505;product=SE1832 family protein;protein_id=WP_014613205.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 30801 31709 . + . ID=gene-CYJ02_RS06485;Name=CYJ02_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06485;old_locus_tag=CYJ02_06485 NZ_PJUQ01000010.1 Protein Homology CDS 30801 31709 . + 0 ID=cds-WP_096548263.1;Parent=gene-CYJ02_RS06485;Dbxref=GenBank:WP_096548263.1;Name=WP_096548263.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613206.1;locus_tag=CYJ02_RS06485;product=AEC family transporter;protein_id=WP_096548263.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 31791 32651 . - . ID=gene-CYJ02_RS06490;Name=CYJ02_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06490;old_locus_tag=CYJ02_06490 NZ_PJUQ01000010.1 Protein Homology CDS 31791 32651 . - 0 ID=cds-WP_014613207.1;Parent=gene-CYJ02_RS06490;Dbxref=GenBank:WP_014613207.1;Name=WP_014613207.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=CYJ02_RS06490;product=GNAT family N-acetyltransferase;protein_id=WP_014613207.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 32792 34927 . + . ID=gene-CYJ02_RS06495;Name=CYJ02_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06495;old_locus_tag=CYJ02_06495 NZ_PJUQ01000010.1 Protein Homology CDS 32792 34927 . + 0 ID=cds-WP_014613208.1;Parent=gene-CYJ02_RS06495;Dbxref=GenBank:WP_014613208.1;Name=WP_014613208.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729516.1;locus_tag=CYJ02_RS06495;product=DNA topoisomerase III;protein_id=WP_014613208.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 35048 36382 . + . ID=gene-CYJ02_RS06500;Name=CYJ02_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06500;old_locus_tag=CYJ02_06500 NZ_PJUQ01000010.1 Protein Homology CDS 35048 36382 . + 0 ID=cds-WP_014613209.1;Parent=gene-CYJ02_RS06500;Dbxref=GenBank:WP_014613209.1;Name=WP_014613209.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=CYJ02_RS06500;product=NCS2 family permease;protein_id=WP_014613209.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 36604 36789 . + . ID=gene-CYJ02_RS12730;Name=CYJ02_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12730 NZ_PJUQ01000010.1 GeneMarkS-2+ CDS 36604 36789 . + 0 ID=cds-WP_241901319.1;Parent=gene-CYJ02_RS12730;Dbxref=GenBank:WP_241901319.1;Name=WP_241901319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12730;product=hypothetical protein;protein_id=WP_241901319.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq pseudogene 36776 37065 . + . ID=gene-CYJ02_RS12735;Name=CYJ02_RS12735;end_range=37065,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12735;partial=true;pseudo=true;start_range=.,36776 NZ_PJUQ01000010.1 Protein Homology CDS 36776 37065 . + 0 ID=cds-CYJ02_RS12735;Parent=gene-CYJ02_RS12735;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=37065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12735;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,36776;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 37723 38109 . - . ID=gene-CYJ02_RS06510;Name=CYJ02_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06510;old_locus_tag=CYJ02_06510 NZ_PJUQ01000010.1 Protein Homology CDS 37723 38109 . - 0 ID=cds-WP_014613210.1;Parent=gene-CYJ02_RS06510;Dbxref=GenBank:WP_014613210.1;Name=WP_014613210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729513.1;locus_tag=CYJ02_RS06510;product=hypothetical protein;protein_id=WP_014613210.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 38573 38881 . + . ID=gene-CYJ02_RS06515;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS06515;old_locus_tag=CYJ02_06515 NZ_PJUQ01000010.1 Protein Homology CDS 38573 38881 . + 0 ID=cds-WP_014613211.1;Parent=gene-CYJ02_RS06515;Dbxref=GenBank:WP_014613211.1;Name=WP_014613211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CYJ02_RS06515;product=30S ribosomal protein S10;protein_id=WP_014613211.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 38909 39568 . + . ID=gene-CYJ02_RS06520;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06520;old_locus_tag=CYJ02_06520 NZ_PJUQ01000010.1 Protein Homology CDS 38909 39568 . + 0 ID=cds-WP_014613212.1;Parent=gene-CYJ02_RS06520;Dbxref=GenBank:WP_014613212.1;Name=WP_014613212.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=CYJ02_RS06520;product=50S ribosomal protein L3;protein_id=WP_014613212.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 39595 40218 . + . ID=gene-CYJ02_RS06525;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06525;old_locus_tag=CYJ02_06525 NZ_PJUQ01000010.1 Protein Homology CDS 39595 40218 . + 0 ID=cds-WP_014613213.1;Parent=gene-CYJ02_RS06525;Dbxref=GenBank:WP_014613213.1;Name=WP_014613213.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=CYJ02_RS06525;product=50S ribosomal protein L4;protein_id=WP_014613213.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 40218 40493 . + . ID=gene-CYJ02_RS06530;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CYJ02_RS06530;old_locus_tag=CYJ02_06530 NZ_PJUQ01000010.1 Protein Homology CDS 40218 40493 . + 0 ID=cds-WP_014613214.1;Parent=gene-CYJ02_RS06530;Dbxref=GenBank:WP_014613214.1;Name=WP_014613214.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CYJ02_RS06530;product=50S ribosomal protein L23;protein_id=WP_014613214.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 40525 41358 . + . ID=gene-CYJ02_RS06535;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06535;old_locus_tag=CYJ02_06535 NZ_PJUQ01000010.1 Protein Homology CDS 40525 41358 . + 0 ID=cds-WP_014613215.1;Parent=gene-CYJ02_RS06535;Dbxref=GenBank:WP_014613215.1;Name=WP_014613215.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=CYJ02_RS06535;product=50S ribosomal protein L2;protein_id=WP_014613215.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 41423 41701 . + . ID=gene-CYJ02_RS06540;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CYJ02_RS06540;old_locus_tag=CYJ02_06540 NZ_PJUQ01000010.1 Protein Homology CDS 41423 41701 . + 0 ID=cds-WP_014613216.1;Parent=gene-CYJ02_RS06540;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=CYJ02_RS06540;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 41735 42088 . + . ID=gene-CYJ02_RS06545;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CYJ02_RS06545;old_locus_tag=CYJ02_06545 NZ_PJUQ01000010.1 Protein Homology CDS 41735 42088 . + 0 ID=cds-WP_014613217.1;Parent=gene-CYJ02_RS06545;Dbxref=GenBank:WP_014613217.1;Name=WP_014613217.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CYJ02_RS06545;product=50S ribosomal protein L22;protein_id=WP_014613217.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 42112 42765 . + . ID=gene-CYJ02_RS06550;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06550;old_locus_tag=CYJ02_06550 NZ_PJUQ01000010.1 Protein Homology CDS 42112 42765 . + 0 ID=cds-WP_014613218.1;Parent=gene-CYJ02_RS06550;Dbxref=GenBank:WP_014613218.1;Name=WP_014613218.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=CYJ02_RS06550;product=30S ribosomal protein S3;protein_id=WP_014613218.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 42768 43202 . + . ID=gene-CYJ02_RS06555;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CYJ02_RS06555;old_locus_tag=CYJ02_06555 NZ_PJUQ01000010.1 Protein Homology CDS 42768 43202 . + 0 ID=cds-WP_014613219.1;Parent=gene-CYJ02_RS06555;Dbxref=GenBank:WP_014613219.1;Name=WP_014613219.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CYJ02_RS06555;product=50S ribosomal protein L16;protein_id=WP_014613219.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 43192 43401 . + . ID=gene-CYJ02_RS06560;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06560;old_locus_tag=CYJ02_06560 NZ_PJUQ01000010.1 Protein Homology CDS 43192 43401 . + 0 ID=cds-WP_014613220.1;Parent=gene-CYJ02_RS06560;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CYJ02_RS06560;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 43427 43690 . + . ID=gene-CYJ02_RS06565;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS06565;old_locus_tag=CYJ02_06565 NZ_PJUQ01000010.1 Protein Homology CDS 43427 43690 . + 0 ID=cds-WP_014613221.1;Parent=gene-CYJ02_RS06565;Dbxref=GenBank:WP_014613221.1;Name=WP_014613221.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CYJ02_RS06565;product=30S ribosomal protein S17;protein_id=WP_014613221.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 43719 44087 . + . ID=gene-CYJ02_RS06570;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CYJ02_RS06570;old_locus_tag=CYJ02_06570 NZ_PJUQ01000010.1 Protein Homology CDS 43719 44087 . + 0 ID=cds-WP_014613222.1;Parent=gene-CYJ02_RS06570;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=CYJ02_RS06570;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 44131 44445 . + . ID=gene-CYJ02_RS06575;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CYJ02_RS06575;old_locus_tag=CYJ02_06575 NZ_PJUQ01000010.1 Protein Homology CDS 44131 44445 . + 0 ID=cds-WP_014613223.1;Parent=gene-CYJ02_RS06575;Dbxref=GenBank:WP_014613223.1;Name=WP_014613223.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613223.1;locus_tag=CYJ02_RS06575;product=50S ribosomal protein L24;protein_id=WP_014613223.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 44471 45010 . + . ID=gene-CYJ02_RS06580;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CYJ02_RS06580;old_locus_tag=CYJ02_06580 NZ_PJUQ01000010.1 Protein Homology CDS 44471 45010 . + 0 ID=cds-WP_014613224.1;Parent=gene-CYJ02_RS06580;Dbxref=GenBank:WP_014613224.1;Name=WP_014613224.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=CYJ02_RS06580;product=50S ribosomal protein L5;protein_id=WP_014613224.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 45032 45217 . + . ID=gene-CYJ02_RS06585;Name=CYJ02_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06585;old_locus_tag=CYJ02_06585 NZ_PJUQ01000010.1 Protein Homology CDS 45032 45217 . + 0 ID=cds-WP_014613225.1;Parent=gene-CYJ02_RS06585;Dbxref=GenBank:WP_014613225.1;Name=WP_014613225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=CYJ02_RS06585;product=type Z 30S ribosomal protein S14;protein_id=WP_014613225.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 45248 45646 . + . ID=gene-CYJ02_RS06590;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CYJ02_RS06590;old_locus_tag=CYJ02_06590 NZ_PJUQ01000010.1 Protein Homology CDS 45248 45646 . + 0 ID=cds-WP_014613226.1;Parent=gene-CYJ02_RS06590;Dbxref=GenBank:WP_014613226.1;Name=WP_014613226.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CYJ02_RS06590;product=30S ribosomal protein S8;protein_id=WP_014613226.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 45675 46211 . + . ID=gene-CYJ02_RS06595;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CYJ02_RS06595;old_locus_tag=CYJ02_06595 NZ_PJUQ01000010.1 Protein Homology CDS 45675 46211 . + 0 ID=cds-WP_014613227.1;Parent=gene-CYJ02_RS06595;Dbxref=GenBank:WP_014613227.1;Name=WP_014613227.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CYJ02_RS06595;product=50S ribosomal protein L6;protein_id=WP_014613227.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 46243 46602 . + . ID=gene-CYJ02_RS06600;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CYJ02_RS06600;old_locus_tag=CYJ02_06600 NZ_PJUQ01000010.1 Protein Homology CDS 46243 46602 . + 0 ID=cds-WP_014613228.1;Parent=gene-CYJ02_RS06600;Dbxref=GenBank:WP_014613228.1;Name=WP_014613228.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CYJ02_RS06600;product=50S ribosomal protein L18;protein_id=WP_014613228.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 46625 47125 . + . ID=gene-CYJ02_RS06605;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CYJ02_RS06605;old_locus_tag=CYJ02_06605 NZ_PJUQ01000010.1 Protein Homology CDS 46625 47125 . + 0 ID=cds-WP_014613229.1;Parent=gene-CYJ02_RS06605;Dbxref=GenBank:WP_014613229.1;Name=WP_014613229.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CYJ02_RS06605;product=30S ribosomal protein S5;protein_id=WP_014613229.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 47142 47321 . + . ID=gene-CYJ02_RS06610;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06610;old_locus_tag=CYJ02_06610 NZ_PJUQ01000010.1 Protein Homology CDS 47142 47321 . + 0 ID=cds-WP_014613230.1;Parent=gene-CYJ02_RS06610;Dbxref=GenBank:WP_014613230.1;Name=WP_014613230.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=CYJ02_RS06610;product=50S ribosomal protein L30;protein_id=WP_014613230.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 47338 47778 . + . ID=gene-CYJ02_RS06615;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CYJ02_RS06615;old_locus_tag=CYJ02_06615 NZ_PJUQ01000010.1 Protein Homology CDS 47338 47778 . + 0 ID=cds-WP_014613231.1;Parent=gene-CYJ02_RS06615;Dbxref=GenBank:WP_014613231.1;Name=WP_014613231.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=CYJ02_RS06615;product=50S ribosomal protein L15;protein_id=WP_014613231.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 47778 49070 . + . ID=gene-CYJ02_RS06620;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CYJ02_RS06620;old_locus_tag=CYJ02_06620 NZ_PJUQ01000010.1 Protein Homology CDS 47778 49070 . + 0 ID=cds-WP_101431502.1;Parent=gene-CYJ02_RS06620;Dbxref=GenBank:WP_101431502.1;Name=WP_101431502.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CYJ02_RS06620;product=preprotein translocase subunit SecY;protein_id=WP_101431502.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 49088 49741 . + . ID=gene-CYJ02_RS06625;Name=CYJ02_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06625;old_locus_tag=CYJ02_06625 NZ_PJUQ01000010.1 Protein Homology CDS 49088 49741 . + 0 ID=cds-WP_101431503.1;Parent=gene-CYJ02_RS06625;Dbxref=GenBank:WP_101431503.1;Name=WP_101431503.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613233.1;locus_tag=CYJ02_RS06625;product=adenylate kinase;protein_id=WP_101431503.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 49908 50126 . + . ID=gene-CYJ02_RS06630;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06630;old_locus_tag=CYJ02_06630 NZ_PJUQ01000010.1 Protein Homology CDS 49908 50126 . + 0 ID=cds-WP_001118443.1;Parent=gene-CYJ02_RS06630;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=CYJ02_RS06630;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 50158 50271 . + . ID=gene-CYJ02_RS06635;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS06635;old_locus_tag=CYJ02_06635 NZ_PJUQ01000010.1 Protein Homology CDS 50158 50271 . + 0 ID=cds-WP_002509257.1;Parent=gene-CYJ02_RS06635;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=CYJ02_RS06635;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 50295 50660 . + . ID=gene-CYJ02_RS06640;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CYJ02_RS06640;old_locus_tag=CYJ02_06640 NZ_PJUQ01000010.1 Protein Homology CDS 50295 50660 . + 0 ID=cds-WP_014613234.1;Parent=gene-CYJ02_RS06640;Dbxref=GenBank:WP_014613234.1;Name=WP_014613234.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CYJ02_RS06640;product=30S ribosomal protein S13;protein_id=WP_014613234.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 50685 51074 . + . ID=gene-CYJ02_RS06645;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CYJ02_RS06645;old_locus_tag=CYJ02_06645 NZ_PJUQ01000010.1 Protein Homology CDS 50685 51074 . + 0 ID=cds-WP_014613235.1;Parent=gene-CYJ02_RS06645;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CYJ02_RS06645;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 51150 52094 . + . ID=gene-CYJ02_RS06650;Name=CYJ02_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06650;old_locus_tag=CYJ02_06650 NZ_PJUQ01000010.1 Protein Homology CDS 51150 52094 . + 0 ID=cds-WP_014613236.1;Parent=gene-CYJ02_RS06650;Dbxref=GenBank:WP_014613236.1;Name=WP_014613236.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CYJ02_RS06650;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014613236.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 52111 52479 . + . ID=gene-CYJ02_RS06655;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS06655;old_locus_tag=CYJ02_06655 NZ_PJUQ01000010.1 Protein Homology CDS 52111 52479 . + 0 ID=cds-WP_014613237.1;Parent=gene-CYJ02_RS06655;Dbxref=GenBank:WP_014613237.1;Name=WP_014613237.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CYJ02_RS06655;product=50S ribosomal protein L17;protein_id=WP_014613237.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 52960 53769 . + . ID=gene-CYJ02_RS06660;Name=CYJ02_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06660;old_locus_tag=CYJ02_06660 NZ_PJUQ01000010.1 Protein Homology CDS 52960 53769 . + 0 ID=cds-WP_014613238.1;Parent=gene-CYJ02_RS06660;Dbxref=GenBank:WP_014613238.1;Name=WP_014613238.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167910.1;locus_tag=CYJ02_RS06660;product=energy-coupling factor transporter ATPase;protein_id=WP_014613238.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 53766 54632 . + . ID=gene-CYJ02_RS06665;Name=CYJ02_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06665;old_locus_tag=CYJ02_06665 NZ_PJUQ01000010.1 Protein Homology CDS 53766 54632 . + 0 ID=cds-WP_101431504.1;Parent=gene-CYJ02_RS06665;Dbxref=GenBank:WP_101431504.1;Name=WP_101431504.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166626.1;locus_tag=CYJ02_RS06665;product=energy-coupling factor transporter ATPase;protein_id=WP_101431504.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 54622 55425 . + . ID=gene-CYJ02_RS06670;Name=CYJ02_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06670;old_locus_tag=CYJ02_06670 NZ_PJUQ01000010.1 Protein Homology CDS 54622 55425 . + 0 ID=cds-WP_014613240.1;Parent=gene-CYJ02_RS06670;Dbxref=GenBank:WP_014613240.1;Name=WP_014613240.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613240.1;locus_tag=CYJ02_RS06670;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_014613240.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 55441 56244 . + . ID=gene-CYJ02_RS06675;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06675;old_locus_tag=CYJ02_06675 NZ_PJUQ01000010.1 Protein Homology CDS 55441 56244 . + 0 ID=cds-WP_101431505.1;Parent=gene-CYJ02_RS06675;Dbxref=GenBank:WP_101431505.1;Name=WP_101431505.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167913.1;locus_tag=CYJ02_RS06675;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_101431505.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 56453 56890 . + . ID=gene-CYJ02_RS06680;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CYJ02_RS06680;old_locus_tag=CYJ02_06680 NZ_PJUQ01000010.1 Protein Homology CDS 56453 56890 . + 0 ID=cds-WP_101431506.1;Parent=gene-CYJ02_RS06680;Dbxref=GenBank:WP_101431506.1;Name=WP_101431506.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CYJ02_RS06680;product=50S ribosomal protein L13;protein_id=WP_101431506.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 56910 57302 . + . ID=gene-CYJ02_RS06685;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ02_RS06685;old_locus_tag=CYJ02_06685 NZ_PJUQ01000010.1 Protein Homology CDS 56910 57302 . + 0 ID=cds-WP_241901321.1;Parent=gene-CYJ02_RS06685;Dbxref=GenBank:WP_241901321.1;Name=WP_241901321.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=CYJ02_RS06685;product=30S ribosomal protein S9;protein_id=WP_241901321.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 58004 58906 . + . ID=gene-CYJ02_RS06690;Name=CYJ02_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06690;old_locus_tag=CYJ02_06690 NZ_PJUQ01000010.1 Protein Homology CDS 58004 58906 . + 0 ID=cds-WP_100002739.1;Parent=gene-CYJ02_RS06690;Dbxref=GenBank:WP_100002739.1;Name=WP_100002739.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF019976.7;locus_tag=CYJ02_RS06690;product=nuclease-related domain-containing protein;protein_id=WP_100002739.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 59015 59560 . - . ID=gene-CYJ02_RS06695;Name=CYJ02_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06695;old_locus_tag=CYJ02_06695 NZ_PJUQ01000010.1 Protein Homology CDS 59015 59560 . - 0 ID=cds-WP_063278952.1;Parent=gene-CYJ02_RS06695;Dbxref=GenBank:WP_063278952.1;Name=WP_063278952.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166630.1;locus_tag=CYJ02_RS06695;product=cysteine hydrolase family protein;protein_id=WP_063278952.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 59866 60618 . + . ID=gene-CYJ02_RS06700;Name=CYJ02_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06700;old_locus_tag=CYJ02_06700 NZ_PJUQ01000010.1 Protein Homology CDS 59866 60618 . + 0 ID=cds-WP_063278951.1;Parent=gene-CYJ02_RS06700;Dbxref=GenBank:WP_063278951.1;Name=WP_063278951.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=CYJ02_RS06700;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_063278951.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 60823 61251 . + . ID=gene-CYJ02_RS06705;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06705;old_locus_tag=CYJ02_06705 NZ_PJUQ01000010.1 Protein Homology CDS 60823 61251 . + 0 ID=cds-WP_063278950.1;Parent=gene-CYJ02_RS06705;Dbxref=GenBank:WP_063278950.1;Name=WP_063278950.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=CYJ02_RS06705;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_063278950.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 61267 61782 . + . ID=gene-CYJ02_RS06710;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06710;old_locus_tag=CYJ02_06710 NZ_PJUQ01000010.1 Protein Homology CDS 61267 61782 . + 0 ID=cds-WP_014613254.1;Parent=gene-CYJ02_RS06710;Dbxref=GenBank:WP_014613254.1;Name=WP_014613254.1;Ontology_term=GO:0019512,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CYJ02_RS06710;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_014613254.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 61853 62821 . + . ID=gene-CYJ02_RS06715;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06715;old_locus_tag=CYJ02_06715 NZ_PJUQ01000010.1 Protein Homology CDS 61853 62821 . + 0 ID=cds-WP_015729497.1;Parent=gene-CYJ02_RS06715;Dbxref=GenBank:WP_015729497.1;Name=WP_015729497.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=CYJ02_RS06715;product=tagatose-bisphosphate aldolase;protein_id=WP_015729497.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 62847 63161 . + . ID=gene-CYJ02_RS06720;Name=CYJ02_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06720;old_locus_tag=CYJ02_06720 NZ_PJUQ01000010.1 Protein Homology CDS 62847 63161 . + 0 ID=cds-WP_101431508.1;Parent=gene-CYJ02_RS06720;Dbxref=GenBank:WP_101431508.1;Name=WP_101431508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=CYJ02_RS06720;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_101431508.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 63167 64891 . + . ID=gene-CYJ02_RS06725;Name=CYJ02_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06725;old_locus_tag=CYJ02_06725 NZ_PJUQ01000010.1 Protein Homology CDS 63167 64891 . + 0 ID=cds-WP_100004518.1;Parent=gene-CYJ02_RS06725;Dbxref=GenBank:WP_100004518.1;Name=WP_100004518.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=CYJ02_RS06725;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_100004518.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 64909 66315 . + . ID=gene-CYJ02_RS06730;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=CYJ02_RS06730;old_locus_tag=CYJ02_06730 NZ_PJUQ01000010.1 Protein Homology CDS 64909 66315 . + 0 ID=cds-WP_014613258.1;Parent=gene-CYJ02_RS06730;Dbxref=GenBank:WP_014613258.1;Name=WP_014613258.1;Ontology_term=GO:0019512,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613258.1;locus_tag=CYJ02_RS06730;product=6-phospho-beta-galactosidase;protein_id=WP_014613258.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 66778 68412 . + . ID=gene-CYJ02_RS06735;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=CYJ02_RS06735;old_locus_tag=CYJ02_06735 NZ_PJUQ01000010.1 Protein Homology CDS 66778 68412 . + 0 ID=cds-WP_070407595.1;Parent=gene-CYJ02_RS06735;Dbxref=GenBank:WP_070407595.1;Name=WP_070407595.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729493.1;locus_tag=CYJ02_RS06735;product=ribosomal protection-like ABC-F family protein;protein_id=WP_070407595.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 68573 69562 . - . ID=gene-CYJ02_RS06740;Name=CYJ02_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06740;old_locus_tag=CYJ02_06740 NZ_PJUQ01000010.1 Protein Homology CDS 68573 69562 . - 0 ID=cds-WP_037542467.1;Parent=gene-CYJ02_RS06740;Dbxref=GenBank:WP_037542467.1;Name=WP_037542467.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729492.1;locus_tag=CYJ02_RS06740;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037542467.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 69664 70674 . + . ID=gene-CYJ02_RS06745;Name=CYJ02_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06745;old_locus_tag=CYJ02_06745 NZ_PJUQ01000010.1 Protein Homology CDS 69664 70674 . + 0 ID=cds-WP_101431509.1;Parent=gene-CYJ02_RS06745;Dbxref=GenBank:WP_101431509.1;Name=WP_101431509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=CYJ02_RS06745;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_101431509.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 70731 72251 . + . ID=gene-CYJ02_RS06750;Name=CYJ02_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06750;old_locus_tag=CYJ02_06750 NZ_PJUQ01000010.1 Protein Homology CDS 70731 72251 . + 0 ID=cds-WP_070407598.1;Parent=gene-CYJ02_RS06750;Dbxref=GenBank:WP_070407598.1;Name=WP_070407598.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613264.1;locus_tag=CYJ02_RS06750;product=BCCT family transporter;protein_id=WP_070407598.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 72533 73075 . + . ID=gene-CYJ02_RS06755;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=CYJ02_RS06755;old_locus_tag=CYJ02_06755 NZ_PJUQ01000010.1 Protein Homology CDS 72533 73075 . + 0 ID=cds-WP_037542471.1;Parent=gene-CYJ02_RS06755;Dbxref=GenBank:WP_037542471.1;Name=WP_037542471.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=CYJ02_RS06755;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_037542471.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 73088 73333 . + . ID=gene-CYJ02_RS06760;Name=CYJ02_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06760;old_locus_tag=CYJ02_06760 NZ_PJUQ01000010.1 Protein Homology CDS 73088 73333 . + 0 ID=cds-WP_101431510.1;Parent=gene-CYJ02_RS06760;Dbxref=GenBank:WP_101431510.1;Name=WP_101431510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426388.1;locus_tag=CYJ02_RS06760;product=DUF2273 domain-containing protein;protein_id=WP_101431510.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 73387 73878 . + . ID=gene-CYJ02_RS06765;Name=CYJ02_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06765;old_locus_tag=CYJ02_06765 NZ_PJUQ01000010.1 Protein Homology CDS 73387 73878 . + 0 ID=cds-WP_014613267.1;Parent=gene-CYJ02_RS06765;Dbxref=GenBank:WP_014613267.1;Name=WP_014613267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CYJ02_RS06765;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613267.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 73950 75095 . - . ID=gene-CYJ02_RS06770;Name=CYJ02_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06770;old_locus_tag=CYJ02_06770 NZ_PJUQ01000010.1 Protein Homology CDS 73950 75095 . - 0 ID=cds-WP_037542474.1;Parent=gene-CYJ02_RS06770;Dbxref=GenBank:WP_037542474.1;Name=WP_037542474.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613268.1;locus_tag=CYJ02_RS06770;product=MFS transporter;protein_id=WP_037542474.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 75207 77174 . - . ID=gene-CYJ02_RS06775;Name=CYJ02_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06775;old_locus_tag=CYJ02_06775 NZ_PJUQ01000010.1 Protein Homology CDS 75207 77174 . - 0 ID=cds-WP_037542477.1;Parent=gene-CYJ02_RS06775;Dbxref=GenBank:WP_037542477.1;Name=WP_037542477.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729487.1;locus_tag=CYJ02_RS06775;product=IucA/IucC family protein;protein_id=WP_037542477.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 77275 78459 . + . ID=gene-CYJ02_RS06780;Name=CYJ02_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06780;old_locus_tag=CYJ02_06780 NZ_PJUQ01000010.1 Protein Homology CDS 77275 78459 . + 0 ID=cds-WP_101431511.1;Parent=gene-CYJ02_RS06780;Dbxref=GenBank:WP_101431511.1;Name=WP_101431511.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613270.1;locus_tag=CYJ02_RS06780;product=MFS transporter;protein_id=WP_101431511.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 78443 80206 . + . ID=gene-CYJ02_RS06785;Name=CYJ02_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06785;old_locus_tag=CYJ02_06785 NZ_PJUQ01000010.1 Protein Homology CDS 78443 80206 . + 0 ID=cds-WP_015729485.1;Parent=gene-CYJ02_RS06785;Dbxref=GenBank:WP_015729485.1;Name=WP_015729485.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=CYJ02_RS06785;product=IucA/IucC family protein;protein_id=WP_015729485.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 80210 81286 . + . ID=gene-CYJ02_RS06790;Name=CYJ02_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06790;old_locus_tag=CYJ02_06790 NZ_PJUQ01000010.1 Protein Homology CDS 80210 81286 . + 0 ID=cds-WP_065520402.1;Parent=gene-CYJ02_RS06790;Dbxref=GenBank:WP_065520402.1;Name=WP_065520402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=CYJ02_RS06790;product=alanine racemase;protein_id=WP_065520402.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 81356 82345 . + . ID=gene-CYJ02_RS06795;Name=CYJ02_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06795;old_locus_tag=CYJ02_06795 NZ_PJUQ01000010.1 Protein Homology CDS 81356 82345 . + 0 ID=cds-WP_014613273.1;Parent=gene-CYJ02_RS06795;Dbxref=GenBank:WP_014613273.1;Name=WP_014613273.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168333.1;locus_tag=CYJ02_RS06795;product=ABC transporter substrate-binding protein;protein_id=WP_014613273.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 82489 83514 . + . ID=gene-CYJ02_RS06800;Name=CYJ02_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06800;old_locus_tag=CYJ02_06800 NZ_PJUQ01000010.1 Protein Homology CDS 82489 83514 . + 0 ID=cds-WP_014613274.1;Parent=gene-CYJ02_RS06800;Dbxref=GenBank:WP_014613274.1;Name=WP_014613274.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165080.1;locus_tag=CYJ02_RS06800;product=FecCD family ABC transporter permease;protein_id=WP_014613274.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 83511 84473 . + . ID=gene-CYJ02_RS06805;Name=CYJ02_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06805;old_locus_tag=CYJ02_06805 NZ_PJUQ01000010.1 Protein Homology CDS 83511 84473 . + 0 ID=cds-WP_014613275.1;Parent=gene-CYJ02_RS06805;Dbxref=GenBank:WP_014613275.1;Name=WP_014613275.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613275.1;locus_tag=CYJ02_RS06805;product=FecCD family ABC transporter permease;protein_id=WP_014613275.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 84594 85964 . + . ID=gene-CYJ02_RS06810;Name=CYJ02_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06810;old_locus_tag=CYJ02_06810 NZ_PJUQ01000010.1 Protein Homology CDS 84594 85964 . + 0 ID=cds-WP_101431512.1;Parent=gene-CYJ02_RS06810;Dbxref=GenBank:WP_101431512.1;Name=WP_101431512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613276.1;locus_tag=CYJ02_RS06810;product=YjiH family protein;protein_id=WP_101431512.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 86448 86708 . - . ID=gene-CYJ02_RS06815;Name=CYJ02_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06815;old_locus_tag=CYJ02_06815 NZ_PJUQ01000010.1 Protein Homology CDS 86448 86708 . - 0 ID=cds-WP_014613277.1;Parent=gene-CYJ02_RS06815;Dbxref=GenBank:WP_014613277.1;Name=WP_014613277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722958.1;locus_tag=CYJ02_RS06815;product=SunI/YnzG family protein;protein_id=WP_014613277.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 86898 87404 . + . ID=gene-CYJ02_RS06820;Name=CYJ02_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06820;old_locus_tag=CYJ02_06820 NZ_PJUQ01000010.1 Protein Homology CDS 86898 87404 . + 0 ID=cds-WP_014613278.1;Parent=gene-CYJ02_RS06820;Dbxref=GenBank:WP_014613278.1;Name=WP_014613278.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=CYJ02_RS06820;product=metal-dependent hydrolase;protein_id=WP_014613278.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 87477 88667 . + . ID=gene-CYJ02_RS06825;Name=CYJ02_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06825;old_locus_tag=CYJ02_06825 NZ_PJUQ01000010.1 Protein Homology CDS 87477 88667 . + 0 ID=cds-WP_014613279.1;Parent=gene-CYJ02_RS06825;Dbxref=GenBank:WP_014613279.1;Name=WP_014613279.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613279.1;locus_tag=CYJ02_RS06825;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_014613279.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 88678 89358 . + . ID=gene-CYJ02_RS06830;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06830;old_locus_tag=CYJ02_06830 NZ_PJUQ01000010.1 Protein Homology CDS 88678 89358 . + 0 ID=cds-WP_014613280.1;Parent=gene-CYJ02_RS06830;Dbxref=GenBank:WP_014613280.1;Name=WP_014613280.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=CYJ02_RS06830;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_014613280.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 89371 89568 . + . ID=gene-CYJ02_RS06835;Name=CYJ02_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06835;old_locus_tag=CYJ02_06835 NZ_PJUQ01000010.1 Protein Homology CDS 89371 89568 . + 0 ID=cds-WP_014613281.1;Parent=gene-CYJ02_RS06835;Dbxref=GenBank:WP_014613281.1;Name=WP_014613281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729476.1;locus_tag=CYJ02_RS06835;product=hypothetical protein;protein_id=WP_014613281.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 90121 91464 . + . ID=gene-CYJ02_RS06840;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=CYJ02_RS06840;old_locus_tag=CYJ02_06840 NZ_PJUQ01000010.1 Protein Homology CDS 90121 91464 . + 0 ID=cds-WP_101431513.1;Parent=gene-CYJ02_RS06840;Dbxref=GenBank:WP_101431513.1;Name=WP_101431513.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165088.1;locus_tag=CYJ02_RS06840;product=multidrug efflux MFS transporter SdrM;protein_id=WP_101431513.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 91490 91951 . + . ID=gene-CYJ02_RS06845;Name=CYJ02_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06845;old_locus_tag=CYJ02_06845 NZ_PJUQ01000010.1 Protein Homology CDS 91490 91951 . + 0 ID=cds-WP_014613283.1;Parent=gene-CYJ02_RS06845;Dbxref=GenBank:WP_014613283.1;Name=WP_014613283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168476.1;locus_tag=CYJ02_RS06845;product=SepA family multidrug efflux transporter;protein_id=WP_014613283.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 92057 93505 . + . ID=gene-CYJ02_RS06850;Name=CYJ02_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06850;old_locus_tag=CYJ02_06850 NZ_PJUQ01000010.1 Protein Homology CDS 92057 93505 . + 0 ID=cds-WP_014613284.1;Parent=gene-CYJ02_RS06850;Dbxref=GenBank:WP_014613284.1;Name=WP_014613284.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ02_RS06850;product=MDR family MFS transporter;protein_id=WP_014613284.1;transl_table=11 NZ_PJUQ01000010.1 RefSeq gene 93824 94888 . + . ID=gene-CYJ02_RS06855;Name=CYJ02_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06855;old_locus_tag=CYJ02_06855 NZ_PJUQ01000010.1 Protein Homology CDS 93824 94888 . + 0 ID=cds-WP_014613285.1;Parent=gene-CYJ02_RS06855;Dbxref=GenBank:WP_014613285.1;Name=WP_014613285.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=CYJ02_RS06855;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_014613285.1;transl_table=11 ##sequence-region NZ_PJUQ01000011.1 1 73639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000011.1 RefSeq region 1 73639 . + . ID=NZ_PJUQ01000011.1:1..73639;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000011.1 RefSeq gene 1 339 . + . ID=gene-CYJ02_RS12745;Name=CYJ02_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12745;old_locus_tag=CYJ02_06860;partial=true;start_range=.,1 NZ_PJUQ01000011.1 Protein Homology CDS 1 339 . + 0 ID=cds-WP_157929432.1;Parent=gene-CYJ02_RS12745;Dbxref=GenBank:WP_157929432.1;Name=WP_157929432.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ02_RS12745;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_157929432.1;start_range=.,1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 478 2142 . - . ID=gene-CYJ02_RS06865;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CYJ02_RS06865;old_locus_tag=CYJ02_06865 NZ_PJUQ01000011.1 Protein Homology CDS 478 2142 . - 0 ID=cds-WP_037542322.1;Parent=gene-CYJ02_RS06865;Dbxref=GenBank:WP_037542322.1;Name=WP_037542322.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: protein motif:HMM:TIGR00456.1;locus_tag=CYJ02_RS06865;product=arginine--tRNA ligase;protein_id=WP_037542322.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 3195 3701 . + . ID=gene-CYJ02_RS06870;Name=CYJ02_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06870;old_locus_tag=CYJ02_06870 NZ_PJUQ01000011.1 GeneMarkS-2+ CDS 3195 3701 . + 0 ID=cds-WP_015729600.1;Parent=gene-CYJ02_RS06870;Dbxref=GenBank:WP_015729600.1;Name=WP_015729600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS06870;product=hypothetical protein;protein_id=WP_015729600.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 3912 6254 . - . ID=gene-CYJ02_RS06875;Name=CYJ02_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06875;old_locus_tag=CYJ02_06875 NZ_PJUQ01000011.1 Protein Homology CDS 3912 6254 . - 0 ID=cds-WP_101431514.1;Parent=gene-CYJ02_RS06875;Dbxref=GenBank:WP_101431514.1;Name=WP_101431514.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=CYJ02_RS06875;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_101431514.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 7197 8144 . - . ID=gene-CYJ02_RS06880;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06880;old_locus_tag=CYJ02_06880 NZ_PJUQ01000011.1 Protein Homology CDS 7197 8144 . - 0 ID=cds-WP_037542319.1;Parent=gene-CYJ02_RS06880;Dbxref=GenBank:WP_037542319.1;Name=WP_037542319.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613045.1;locus_tag=CYJ02_RS06880;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037542319.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 8132 8446 . - . ID=gene-CYJ02_RS06885;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06885;old_locus_tag=CYJ02_06885 NZ_PJUQ01000011.1 Protein Homology CDS 8132 8446 . - 0 ID=cds-WP_014613044.1;Parent=gene-CYJ02_RS06885;Dbxref=GenBank:WP_014613044.1;Name=WP_014613044.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=CYJ02_RS06885;product=nitrite reductase small subunit NirD;protein_id=WP_014613044.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 8451 10856 . - . ID=gene-CYJ02_RS06890;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06890;old_locus_tag=CYJ02_06890 NZ_PJUQ01000011.1 Protein Homology CDS 8451 10856 . - 0 ID=cds-WP_014613043.1;Parent=gene-CYJ02_RS06890;Dbxref=GenBank:WP_014613043.1;Name=WP_014613043.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CYJ02_RS06890;product=nitrite reductase large subunit NirB;protein_id=WP_014613043.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 10849 11310 . - . ID=gene-CYJ02_RS06895;Name=CYJ02_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06895;old_locus_tag=CYJ02_06895 NZ_PJUQ01000011.1 Protein Homology CDS 10849 11310 . - 0 ID=cds-WP_014613042.1;Parent=gene-CYJ02_RS06895;Dbxref=GenBank:WP_014613042.1;Name=WP_014613042.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=CYJ02_RS06895;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_014613042.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 11292 12035 . - . ID=gene-CYJ02_RS06900;Name=CYJ02_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06900;old_locus_tag=CYJ02_06900 NZ_PJUQ01000011.1 Protein Homology CDS 11292 12035 . - 0 ID=cds-WP_241901325.1;Parent=gene-CYJ02_RS06900;Dbxref=GenBank:WP_241901325.1;Name=WP_241901325.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613041.1;locus_tag=CYJ02_RS06900;product=sirohydrochlorin chelatase;protein_id=WP_241901325.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 12204 12761 . - . ID=gene-CYJ02_RS06905;Name=CYJ02_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06905;old_locus_tag=CYJ02_06905 NZ_PJUQ01000011.1 Protein Homology CDS 12204 12761 . - 0 ID=cds-WP_101431516.1;Parent=gene-CYJ02_RS06905;Dbxref=GenBank:WP_101431516.1;Name=WP_101431516.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219494.1;locus_tag=CYJ02_RS06905;product=GNAT family N-acetyltransferase;protein_id=WP_101431516.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 12986 13810 . - . ID=gene-CYJ02_RS06910;Name=CYJ02_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06910;old_locus_tag=CYJ02_06910 NZ_PJUQ01000011.1 Protein Homology CDS 12986 13810 . - 0 ID=cds-WP_101431517.1;Parent=gene-CYJ02_RS06910;Dbxref=GenBank:WP_101431517.1;Name=WP_101431517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613039.1;locus_tag=CYJ02_RS06910;product=formate/nitrite transporter family protein;protein_id=WP_101431517.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 14026 15558 . - . ID=gene-CYJ02_RS06915;Name=CYJ02_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06915;old_locus_tag=CYJ02_06915 NZ_PJUQ01000011.1 Protein Homology CDS 14026 15558 . - 0 ID=cds-WP_101431518.1;Parent=gene-CYJ02_RS06915;Dbxref=GenBank:WP_101431518.1;Name=WP_101431518.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729606.1;locus_tag=CYJ02_RS06915;product=SLC13 family permease;protein_id=WP_101431518.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 15656 16663 . - . ID=gene-CYJ02_RS06920;Name=CYJ02_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06920;old_locus_tag=CYJ02_06920 NZ_PJUQ01000011.1 Protein Homology CDS 15656 16663 . - 0 ID=cds-WP_015729607.1;Parent=gene-CYJ02_RS06920;Dbxref=GenBank:WP_015729607.1;Name=WP_015729607.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729607.1;locus_tag=CYJ02_RS06920;product=PTS sugar transporter subunit IIC;protein_id=WP_015729607.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq pseudogene 16723 17421 . + . ID=gene-CYJ02_RS06925;Name=CYJ02_RS06925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS06925;old_locus_tag=CYJ02_06925;partial=true;pseudo=true;start_range=.,16723 NZ_PJUQ01000011.1 Protein Homology CDS 16723 17421 . + 0 ID=cds-CYJ02_RS06925;Parent=gene-CYJ02_RS06925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489526.1;locus_tag=CYJ02_RS06925;partial=true;product=replication initiation factor domain-containing protein;pseudo=true;start_range=.,16723;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 17589 17858 . + . ID=gene-CYJ02_RS06930;Name=CYJ02_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06930;old_locus_tag=CYJ02_06930 NZ_PJUQ01000011.1 Protein Homology CDS 17589 17858 . + 0 ID=cds-WP_101431520.1;Parent=gene-CYJ02_RS06930;Dbxref=GenBank:WP_101431520.1;Name=WP_101431520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729609.1;locus_tag=CYJ02_RS06930;product=hypothetical protein;protein_id=WP_101431520.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 17967 18755 . + . ID=gene-CYJ02_RS06935;Name=CYJ02_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06935;old_locus_tag=CYJ02_06935 NZ_PJUQ01000011.1 Protein Homology CDS 17967 18755 . + 0 ID=cds-WP_015729610.1;Parent=gene-CYJ02_RS06935;Dbxref=GenBank:WP_015729610.1;Name=WP_015729610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613034.1;locus_tag=CYJ02_RS06935;product=hypothetical protein;protein_id=WP_015729610.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 20074 20334 . + . ID=gene-CYJ02_RS06940;Name=CYJ02_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06940;old_locus_tag=CYJ02_06940 NZ_PJUQ01000011.1 Protein Homology CDS 20074 20334 . + 0 ID=cds-WP_014613033.1;Parent=gene-CYJ02_RS06940;Dbxref=GenBank:WP_014613033.1;Name=WP_014613033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046291.3;locus_tag=CYJ02_RS06940;product=hypothetical protein;protein_id=WP_014613033.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 21011 21700 . - . ID=gene-CYJ02_RS06945;Name=CYJ02_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06945;old_locus_tag=CYJ02_06945 NZ_PJUQ01000011.1 Protein Homology CDS 21011 21700 . - 0 ID=cds-WP_014612930.1;Parent=gene-CYJ02_RS06945;Dbxref=GenBank:WP_014612930.1;Name=WP_014612930.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729659.1;locus_tag=CYJ02_RS06945;product=ATP-binding cassette domain-containing protein;protein_id=WP_014612930.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 21693 22469 . - . ID=gene-CYJ02_RS06950;Name=CYJ02_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06950;old_locus_tag=CYJ02_06950 NZ_PJUQ01000011.1 Protein Homology CDS 21693 22469 . - 0 ID=cds-WP_014612929.1;Parent=gene-CYJ02_RS06950;Dbxref=GenBank:WP_014612929.1;Name=WP_014612929.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=CYJ02_RS06950;product=ATP-binding cassette domain-containing protein;protein_id=WP_014612929.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 22462 23286 . - . ID=gene-CYJ02_RS06955;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06955;old_locus_tag=CYJ02_06955 NZ_PJUQ01000011.1 Protein Homology CDS 22462 23286 . - 0 ID=cds-WP_101431521.1;Parent=gene-CYJ02_RS06955;Dbxref=GenBank:WP_101431521.1;Name=WP_101431521.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729661.1;locus_tag=CYJ02_RS06955;product=nickel transporter permease;protein_id=WP_101431521.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 23283 24269 . - . ID=gene-CYJ02_RS06960;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06960;old_locus_tag=CYJ02_06960 NZ_PJUQ01000011.1 Protein Homology CDS 23283 24269 . - 0 ID=cds-WP_014612927.1;Parent=gene-CYJ02_RS06960;Dbxref=GenBank:WP_014612927.1;Name=WP_014612927.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167506.1;locus_tag=CYJ02_RS06960;product=nickel ABC transporter permease;protein_id=WP_014612927.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 24259 25755 . - . ID=gene-CYJ02_RS06965;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06965;old_locus_tag=CYJ02_06965 NZ_PJUQ01000011.1 Protein Homology CDS 24259 25755 . - 0 ID=cds-WP_101431522.1;Parent=gene-CYJ02_RS06965;Dbxref=GenBank:WP_101431522.1;Name=WP_101431522.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=CYJ02_RS06965;product=nickel ABC transporter substrate-binding protein;protein_id=WP_101431522.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 25859 26587 . - . ID=gene-CYJ02_RS06970;Name=CYJ02_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06970;old_locus_tag=CYJ02_06970 NZ_PJUQ01000011.1 Protein Homology CDS 25859 26587 . - 0 ID=cds-WP_101431523.1;Parent=gene-CYJ02_RS06970;Dbxref=GenBank:WP_101431523.1;Name=WP_101431523.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612925.1;locus_tag=CYJ02_RS06970;product=epoxyqueuosine reductase QueH;protein_id=WP_101431523.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 26774 27403 . - . ID=gene-CYJ02_RS06975;Name=CYJ02_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06975;old_locus_tag=CYJ02_06975 NZ_PJUQ01000011.1 Protein Homology CDS 26774 27403 . - 0 ID=cds-WP_020219449.1;Parent=gene-CYJ02_RS06975;Dbxref=GenBank:WP_020219449.1;Name=WP_020219449.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219449.1;locus_tag=CYJ02_RS06975;product=class I SAM-dependent methyltransferase;protein_id=WP_020219449.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 27789 30623 . - . ID=gene-CYJ02_RS06980;Name=CYJ02_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06980;old_locus_tag=CYJ02_06980 NZ_PJUQ01000011.1 Protein Homology CDS 27789 30623 . - 0 ID=cds-WP_101431524.1;Parent=gene-CYJ02_RS06980;Dbxref=GenBank:WP_101431524.1;Name=WP_101431524.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167306.1;locus_tag=CYJ02_RS06980;product=YhgE/Pip domain-containing protein;protein_id=WP_101431524.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 30952 33027 . + . ID=gene-CYJ02_RS06985;Name=CYJ02_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06985;old_locus_tag=CYJ02_06985 NZ_PJUQ01000011.1 Protein Homology CDS 30952 33027 . + 0 ID=cds-WP_101431525.1;Parent=gene-CYJ02_RS06985;Dbxref=GenBank:WP_101431525.1;Name=WP_101431525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729665.1;locus_tag=CYJ02_RS06985;product=amidase domain-containing protein;protein_id=WP_101431525.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 33620 35479 . - . ID=gene-CYJ02_RS06990;Name=spsA;gbkey=Gene;gene=spsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06990;old_locus_tag=CYJ02_06990 NZ_PJUQ01000011.1 Protein Homology CDS 33620 35479 . - 0 ID=cds-WP_101431526.1;Parent=gene-CYJ02_RS06990;Dbxref=GenBank:WP_101431526.1;Name=WP_101431526.1;gbkey=CDS;gene=spsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612921.1;locus_tag=CYJ02_RS06990;product=LPXTG-anchored surface protein SpsA;protein_id=WP_101431526.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 35616 37538 . - . ID=gene-CYJ02_RS06995;Name=CYJ02_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06995;old_locus_tag=CYJ02_06995 NZ_PJUQ01000011.1 Protein Homology CDS 35616 37538 . - 0 ID=cds-WP_101431527.1;Parent=gene-CYJ02_RS06995;Dbxref=GenBank:WP_101431527.1;Name=WP_101431527.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166501.1;locus_tag=CYJ02_RS06995;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_101431527.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 37725 38138 . - . ID=gene-CYJ02_RS12750;Name=CYJ02_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12750 NZ_PJUQ01000011.1 GeneMarkS-2+ CDS 37725 38138 . - 0 ID=cds-WP_241901327.1;Parent=gene-CYJ02_RS12750;Dbxref=GenBank:WP_241901327.1;Name=WP_241901327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12750;product=hypothetical protein;protein_id=WP_241901327.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 38163 38447 . - . ID=gene-CYJ02_RS12755;Name=CYJ02_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12755 NZ_PJUQ01000011.1 Protein Homology CDS 38163 38447 . - 0 ID=cds-WP_241901329.1;Parent=gene-CYJ02_RS12755;Dbxref=GenBank:WP_241901329.1;Name=WP_241901329.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=CYJ02_RS12755;product=MerR family transcriptional regulator;protein_id=WP_241901329.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 38477 39442 . - . ID=gene-CYJ02_RS07005;Name=CYJ02_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07005;old_locus_tag=CYJ02_07005 NZ_PJUQ01000011.1 Protein Homology CDS 38477 39442 . - 0 ID=cds-WP_101431528.1;Parent=gene-CYJ02_RS07005;Dbxref=GenBank:WP_101431528.1;Name=WP_101431528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=CYJ02_RS07005;product=alpha/beta fold hydrolase;protein_id=WP_101431528.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq pseudogene 40117 41424 . - . ID=gene-CYJ02_RS07010;Name=lip;end_range=41424,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=CYJ02_RS07010;old_locus_tag=CYJ02_07010;partial=true;pseudo=true NZ_PJUQ01000011.1 Protein Homology CDS 40117 41424 . - 0 ID=cds-CYJ02_RS07010;Parent=gene-CYJ02_RS07010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=41424,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497700.1;locus_tag=CYJ02_RS07010;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11 NZ_PJUQ01000011.1 RefSeq pseudogene 41497 41583 . - . ID=gene-CYJ02_RS13045;Name=CYJ02_RS13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13045;partial=true;pseudo=true;start_range=.,41497 NZ_PJUQ01000011.1 Protein Homology CDS 41497 41583 . - 0 ID=cds-CYJ02_RS13045;Parent=gene-CYJ02_RS13045;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=CYJ02_RS13045;partial=true;product=YSIRK-type signal peptide-containing protein;pseudo=true;start_range=.,41497;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 42098 43042 . + . ID=gene-CYJ02_RS07015;Name=CYJ02_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07015;old_locus_tag=CYJ02_07015 NZ_PJUQ01000011.1 Protein Homology CDS 42098 43042 . + 0 ID=cds-WP_014612950.1;Parent=gene-CYJ02_RS07015;Dbxref=GenBank:WP_014612950.1;Name=WP_014612950.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=CYJ02_RS07015;product=cation diffusion facilitator family transporter;protein_id=WP_014612950.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 43212 44111 . - . ID=gene-CYJ02_RS07020;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CYJ02_RS07020;old_locus_tag=CYJ02_07020 NZ_PJUQ01000011.1 Protein Homology CDS 43212 44111 . - 0 ID=cds-WP_037542247.1;Parent=gene-CYJ02_RS07020;Dbxref=GenBank:WP_037542247.1;Name=WP_037542247.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612951.1;locus_tag=CYJ02_RS07020;product=urea transporter;protein_id=WP_037542247.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 44359 44661 . + . ID=gene-CYJ02_RS07025;Name=CYJ02_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07025;old_locus_tag=CYJ02_07025 NZ_PJUQ01000011.1 Protein Homology CDS 44359 44661 . + 0 ID=cds-WP_014612952.1;Parent=gene-CYJ02_RS07025;Dbxref=GenBank:WP_014612952.1;Name=WP_014612952.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=CYJ02_RS07025;product=urease subunit gamma;protein_id=WP_014612952.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 44674 45030 . + . ID=gene-CYJ02_RS07030;Name=CYJ02_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07030;old_locus_tag=CYJ02_07030 NZ_PJUQ01000011.1 Protein Homology CDS 44674 45030 . + 0 ID=cds-WP_041614887.1;Parent=gene-CYJ02_RS07030;Dbxref=GenBank:WP_041614887.1;Name=WP_041614887.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=CYJ02_RS07030;product=urease subunit beta;protein_id=WP_041614887.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 45027 46742 . + . ID=gene-CYJ02_RS07035;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07035;old_locus_tag=CYJ02_07035 NZ_PJUQ01000011.1 Protein Homology CDS 45027 46742 . + 0 ID=cds-WP_014612954.1;Parent=gene-CYJ02_RS07035;Dbxref=GenBank:WP_014612954.1;Name=WP_014612954.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CYJ02_RS07035;product=urease subunit alpha;protein_id=WP_014612954.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 47082 47627 . + . ID=gene-CYJ02_RS07040;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CYJ02_RS07040;old_locus_tag=CYJ02_07040 NZ_PJUQ01000011.1 Protein Homology CDS 47082 47627 . + 0 ID=cds-WP_014612955.1;Parent=gene-CYJ02_RS07040;Dbxref=GenBank:WP_014612955.1;Name=WP_014612955.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=CYJ02_RS07040;product=dCTP deaminase;protein_id=WP_014612955.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 47628 48530 . + . ID=gene-CYJ02_RS07045;Name=CYJ02_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07045;old_locus_tag=CYJ02_07045 NZ_PJUQ01000011.1 Protein Homology CDS 47628 48530 . + 0 ID=cds-WP_100007328.1;Parent=gene-CYJ02_RS07045;Dbxref=GenBank:WP_100007328.1;Name=WP_100007328.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=CYJ02_RS07045;product=CobW family GTP-binding protein;protein_id=WP_100007328.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 48828 49250 . + . ID=gene-CYJ02_RS07050;Name=CYJ02_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07050;old_locus_tag=CYJ02_07050 NZ_PJUQ01000011.1 Protein Homology CDS 48828 49250 . + 0 ID=cds-WP_014612957.1;Parent=gene-CYJ02_RS07050;Dbxref=GenBank:WP_014612957.1;Name=WP_014612957.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=CYJ02_RS07050;product=universal stress protein;protein_id=WP_014612957.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 49453 49713 . + . ID=gene-CYJ02_RS07055;Name=CYJ02_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07055;old_locus_tag=CYJ02_07055 NZ_PJUQ01000011.1 Protein Homology CDS 49453 49713 . + 0 ID=cds-WP_020219461.1;Parent=gene-CYJ02_RS07055;Dbxref=GenBank:WP_020219461.1;Name=WP_020219461.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219461.1;locus_tag=CYJ02_RS07055;product=ferredoxin;protein_id=WP_020219461.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 49713 51398 . + . ID=gene-CYJ02_RS07060;Name=CYJ02_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07060;old_locus_tag=CYJ02_07060 NZ_PJUQ01000011.1 Protein Homology CDS 49713 51398 . + 0 ID=cds-WP_101431529.1;Parent=gene-CYJ02_RS07060;Dbxref=GenBank:WP_101431529.1;Name=WP_101431529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729641.1;locus_tag=CYJ02_RS07060;product=hypothetical protein;protein_id=WP_101431529.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 51417 52664 . + . ID=gene-CYJ02_RS07065;Name=CYJ02_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07065;old_locus_tag=CYJ02_07065 NZ_PJUQ01000011.1 Protein Homology CDS 51417 52664 . + 0 ID=cds-WP_014612960.1;Parent=gene-CYJ02_RS07065;Dbxref=GenBank:WP_014612960.1;Name=WP_014612960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612960.1;locus_tag=CYJ02_RS07065;product=ATP-grasp domain-containing protein;protein_id=WP_014612960.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 52661 53893 . + . ID=gene-CYJ02_RS07070;Name=CYJ02_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07070;old_locus_tag=CYJ02_07070 NZ_PJUQ01000011.1 Protein Homology CDS 52661 53893 . + 0 ID=cds-WP_014612961.1;Parent=gene-CYJ02_RS07070;Dbxref=GenBank:WP_014612961.1;Name=WP_014612961.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612961.1;locus_tag=CYJ02_RS07070;product=ATP-grasp domain-containing protein;protein_id=WP_014612961.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 54250 55479 . - . ID=gene-CYJ02_RS07080;Name=CYJ02_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07080;old_locus_tag=CYJ02_07080 NZ_PJUQ01000011.1 Protein Homology CDS 54250 55479 . - 0 ID=cds-WP_041613207.1;Parent=gene-CYJ02_RS07080;Dbxref=GenBank:WP_041613207.1;Name=WP_041613207.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167237.1;locus_tag=CYJ02_RS07080;product=MFS transporter;protein_id=WP_041613207.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 55637 56566 . + . ID=gene-CYJ02_RS07085;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CYJ02_RS07085;old_locus_tag=CYJ02_07085 NZ_PJUQ01000011.1 Protein Homology CDS 55637 56566 . + 0 ID=cds-WP_014612963.1;Parent=gene-CYJ02_RS07085;Dbxref=GenBank:WP_014612963.1;Name=WP_014612963.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729636.1;locus_tag=CYJ02_RS07085;product=cidABC operon transcriptional activator CidR;protein_id=WP_014612963.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 56644 57036 . + . ID=gene-CYJ02_RS07090;Name=CYJ02_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07090;old_locus_tag=CYJ02_07090 NZ_PJUQ01000011.1 Protein Homology CDS 56644 57036 . + 0 ID=cds-WP_014612964.1;Parent=gene-CYJ02_RS07090;Dbxref=GenBank:WP_014612964.1;Name=WP_014612964.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164941.1;locus_tag=CYJ02_RS07090;product=CidA/LrgA family protein;protein_id=WP_014612964.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 57033 57719 . + . ID=gene-CYJ02_RS07095;Name=CYJ02_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07095;old_locus_tag=CYJ02_07095 NZ_PJUQ01000011.1 Protein Homology CDS 57033 57719 . + 0 ID=cds-WP_014612965.1;Parent=gene-CYJ02_RS07095;Dbxref=GenBank:WP_014612965.1;Name=WP_014612965.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612965.1;locus_tag=CYJ02_RS07095;product=LrgB family protein;protein_id=WP_014612965.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 58294 58470 . + . ID=gene-CYJ02_RS12510;Name=CYJ02_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12510 NZ_PJUQ01000011.1 Protein Homology CDS 58294 58470 . + 0 ID=cds-WP_014612966.1;Parent=gene-CYJ02_RS12510;Dbxref=GenBank:WP_014612966.1;Name=WP_014612966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=CYJ02_RS12510;product=hypothetical protein;protein_id=WP_014612966.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 58733 59557 . + . ID=gene-CYJ02_RS07105;Name=CYJ02_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07105;old_locus_tag=CYJ02_07105 NZ_PJUQ01000011.1 Protein Homology CDS 58733 59557 . + 0 ID=cds-WP_063284810.1;Parent=gene-CYJ02_RS07105;Dbxref=GenBank:WP_063284810.1;Name=WP_063284810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612967.1;locus_tag=CYJ02_RS07105;product=hypothetical protein;protein_id=WP_063284810.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 59777 60226 . - . ID=gene-CYJ02_RS07110;Name=CYJ02_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07110;old_locus_tag=CYJ02_07110 NZ_PJUQ01000011.1 Protein Homology CDS 59777 60226 . - 0 ID=cds-WP_065354010.1;Parent=gene-CYJ02_RS07110;Dbxref=GenBank:WP_065354010.1;Name=WP_065354010.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164946.1;locus_tag=CYJ02_RS07110;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_065354010.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 60368 60997 . + . ID=gene-CYJ02_RS07115;Name=CYJ02_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07115;old_locus_tag=CYJ02_07115 NZ_PJUQ01000011.1 Protein Homology CDS 60368 60997 . + 0 ID=cds-WP_015729635.1;Parent=gene-CYJ02_RS07115;Dbxref=GenBank:WP_015729635.1;Name=WP_015729635.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729635.1;locus_tag=CYJ02_RS07115;product=nitroreductase family protein;protein_id=WP_015729635.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 61332 62051 . + . ID=gene-CYJ02_RS07120;Name=CYJ02_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07120;old_locus_tag=CYJ02_07120 NZ_PJUQ01000011.1 Protein Homology CDS 61332 62051 . + 0 ID=cds-WP_014612970.1;Parent=gene-CYJ02_RS07120;Dbxref=GenBank:WP_014612970.1;Name=WP_014612970.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167245.1;locus_tag=CYJ02_RS07120;product=GTP pyrophosphokinase;protein_id=WP_014612970.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 62362 62919 . - . ID=gene-CYJ02_RS07125;Name=CYJ02_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07125;old_locus_tag=CYJ02_07125 NZ_PJUQ01000011.1 Protein Homology CDS 62362 62919 . - 0 ID=cds-WP_063278848.1;Parent=gene-CYJ02_RS07125;Dbxref=GenBank:WP_063278848.1;Name=WP_063278848.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612971.1;locus_tag=CYJ02_RS07125;product=M23 family metallopeptidase;protein_id=WP_063278848.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 63087 63794 . - . ID=gene-CYJ02_RS07130;Name=CYJ02_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07130;old_locus_tag=CYJ02_07130 NZ_PJUQ01000011.1 Protein Homology CDS 63087 63794 . - 0 ID=cds-WP_014612972.1;Parent=gene-CYJ02_RS07130;Dbxref=GenBank:WP_014612972.1;Name=WP_014612972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=CYJ02_RS07130;product=hypothetical protein;protein_id=WP_014612972.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 64216 65634 . + . ID=gene-CYJ02_RS07135;Name=CYJ02_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07135;old_locus_tag=CYJ02_07135 NZ_PJUQ01000011.1 Protein Homology CDS 64216 65634 . + 0 ID=cds-WP_181394590.1;Parent=gene-CYJ02_RS07135;Dbxref=GenBank:WP_181394590.1;Name=WP_181394590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=CYJ02_RS07135;product=phosphate--AMP phosphotransferase;protein_id=WP_181394590.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 65738 66613 . + . ID=gene-CYJ02_RS07140;Name=CYJ02_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07140;old_locus_tag=CYJ02_07140 NZ_PJUQ01000011.1 Protein Homology CDS 65738 66613 . + 0 ID=cds-WP_101431531.1;Parent=gene-CYJ02_RS07140;Dbxref=GenBank:WP_101431531.1;Name=WP_101431531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=CYJ02_RS07140;product=alpha/beta fold hydrolase;protein_id=WP_101431531.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 66695 66904 . - . ID=gene-CYJ02_RS07145;Name=CYJ02_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07145;old_locus_tag=CYJ02_07145 NZ_PJUQ01000011.1 Protein Homology CDS 66695 66904 . - 0 ID=cds-WP_014612975.1;Parent=gene-CYJ02_RS07145;Dbxref=GenBank:WP_014612975.1;Name=WP_014612975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167250.1;locus_tag=CYJ02_RS07145;product=hypothetical protein;protein_id=WP_014612975.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 67091 68215 . + . ID=gene-CYJ02_RS07150;Name=CYJ02_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07150;old_locus_tag=CYJ02_07150 NZ_PJUQ01000011.1 Protein Homology CDS 67091 68215 . + 0 ID=cds-WP_014612976.1;Parent=gene-CYJ02_RS07150;Dbxref=GenBank:WP_014612976.1;Name=WP_014612976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=CYJ02_RS07150;product=hypothetical protein;protein_id=WP_014612976.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 68422 69939 . - . ID=gene-CYJ02_RS07155;Name=CYJ02_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07155;old_locus_tag=CYJ02_07155 NZ_PJUQ01000011.1 Protein Homology CDS 68422 69939 . - 0 ID=cds-WP_101431532.1;Parent=gene-CYJ02_RS07155;Dbxref=GenBank:WP_101431532.1;Name=WP_101431532.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=CYJ02_RS07155;product=M4 family metallopeptidase;protein_id=WP_101431532.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 70323 71204 . + . ID=gene-CYJ02_RS07160;Name=CYJ02_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07160;old_locus_tag=CYJ02_07160 NZ_PJUQ01000011.1 Protein Homology CDS 70323 71204 . + 0 ID=cds-WP_101431533.1;Parent=gene-CYJ02_RS07160;Dbxref=GenBank:WP_101431533.1;Name=WP_101431533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014600603.1;locus_tag=CYJ02_RS07160;product=SDR family oxidoreductase;protein_id=WP_101431533.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 71431 72588 . + . ID=gene-CYJ02_RS07165;Name=CYJ02_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07165;old_locus_tag=CYJ02_07165 NZ_PJUQ01000011.1 Protein Homology CDS 71431 72588 . + 0 ID=cds-WP_014612979.1;Parent=gene-CYJ02_RS07165;Dbxref=GenBank:WP_014612979.1;Name=WP_014612979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165895.1;locus_tag=CYJ02_RS07165;product=FAD/NAD(P)-binding protein;protein_id=WP_014612979.1;transl_table=11 NZ_PJUQ01000011.1 RefSeq gene 72660 73055 . + . ID=gene-CYJ02_RS07170;Name=CYJ02_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07170;old_locus_tag=CYJ02_07170 NZ_PJUQ01000011.1 Protein Homology CDS 72660 73055 . + 0 ID=cds-WP_014612980.1;Parent=gene-CYJ02_RS07170;Dbxref=GenBank:WP_014612980.1;Name=WP_014612980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=CYJ02_RS07170;product=hypothetical protein;protein_id=WP_014612980.1;transl_table=11 ##sequence-region NZ_PJUQ01000012.1 1 75429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000012.1 RefSeq region 1 75429 . + . ID=NZ_PJUQ01000012.1:1..75429;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000012.1 RefSeq pseudogene 1 260 . - . ID=gene-CYJ02_RS07175;Name=CYJ02_RS07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS07175;old_locus_tag=CYJ02_07175;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000012.1 Protein Homology CDS 1 260 . - 0 ID=cds-CYJ02_RS07175;Parent=gene-CYJ02_RS07175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS07175;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 811 1695 . - . ID=gene-CYJ02_RS07180;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07180;old_locus_tag=CYJ02_07180 NZ_PJUQ01000012.1 Protein Homology CDS 811 1695 . - 0 ID=cds-WP_015729563.1;Parent=gene-CYJ02_RS07180;Dbxref=GenBank:WP_015729563.1;Name=WP_015729563.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167144.1;locus_tag=CYJ02_RS07180;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_015729563.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 2101 3030 . + . ID=gene-CYJ02_RS07185;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CYJ02_RS07185;old_locus_tag=CYJ02_07185 NZ_PJUQ01000012.1 Protein Homology CDS 2101 3030 . + 0 ID=cds-WP_101431534.1;Parent=gene-CYJ02_RS07185;Dbxref=GenBank:WP_101431534.1;Name=WP_101431534.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=CYJ02_RS07185;product=formimidoylglutamase;protein_id=WP_101431534.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 3140 3835 . - . ID=gene-CYJ02_RS07190;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07190;old_locus_tag=CYJ02_07190 NZ_PJUQ01000012.1 Protein Homology CDS 3140 3835 . - 0 ID=cds-WP_014613126.1;Parent=gene-CYJ02_RS07190;Dbxref=GenBank:WP_014613126.1;Name=WP_014613126.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=CYJ02_RS07190;product=ribose 5-phosphate isomerase A;protein_id=WP_014613126.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 3961 4620 . + . ID=gene-CYJ02_RS07195;Name=CYJ02_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07195;old_locus_tag=CYJ02_07195 NZ_PJUQ01000012.1 Protein Homology CDS 3961 4620 . + 0 ID=cds-WP_014613125.1;Parent=gene-CYJ02_RS07195;Dbxref=GenBank:WP_014613125.1;Name=WP_014613125.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613125.1;locus_tag=CYJ02_RS07195;product=MOSC domain-containing protein;protein_id=WP_014613125.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 4692 5717 . - . ID=gene-CYJ02_RS07200;Name=CYJ02_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07200;old_locus_tag=CYJ02_07200 NZ_PJUQ01000012.1 Protein Homology CDS 4692 5717 . - 0 ID=cds-WP_014613124.1;Parent=gene-CYJ02_RS07200;Dbxref=GenBank:WP_014613124.1;Name=WP_014613124.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613124.1;locus_tag=CYJ02_RS07200;product=aldose epimerase family protein;protein_id=WP_014613124.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 5752 6084 . - . ID=gene-CYJ02_RS07205;Name=CYJ02_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07205;old_locus_tag=CYJ02_07205 NZ_PJUQ01000012.1 Protein Homology CDS 5752 6084 . - 0 ID=cds-WP_015729565.1;Parent=gene-CYJ02_RS07205;Dbxref=GenBank:WP_015729565.1;Name=WP_015729565.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=CYJ02_RS07205;product=YnfA family protein;protein_id=WP_015729565.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 6237 7481 . - . ID=gene-CYJ02_RS07210;Name=CYJ02_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07210;old_locus_tag=CYJ02_07210 NZ_PJUQ01000012.1 Protein Homology CDS 6237 7481 . - 0 ID=cds-WP_014613122.1;Parent=gene-CYJ02_RS07210;Dbxref=GenBank:WP_014613122.1;Name=WP_014613122.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=CYJ02_RS07210;product=ABC transporter permease;protein_id=WP_014613122.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 7483 8373 . - . ID=gene-CYJ02_RS07215;Name=CYJ02_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07215;old_locus_tag=CYJ02_07215 NZ_PJUQ01000012.1 Protein Homology CDS 7483 8373 . - 0 ID=cds-WP_014613121.1;Parent=gene-CYJ02_RS07215;Dbxref=GenBank:WP_014613121.1;Name=WP_014613121.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613121.1;locus_tag=CYJ02_RS07215;product=ABC transporter ATP-binding protein;protein_id=WP_014613121.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 8632 9318 . - . ID=gene-CYJ02_RS07220;Name=CYJ02_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07220;old_locus_tag=CYJ02_07220 NZ_PJUQ01000012.1 Protein Homology CDS 8632 9318 . - 0 ID=cds-WP_014613120.1;Parent=gene-CYJ02_RS07220;Dbxref=GenBank:WP_014613120.1;Name=WP_014613120.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613120.1;locus_tag=CYJ02_RS07220;product=DUF805 domain-containing protein;protein_id=WP_014613120.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 9498 10106 . + . ID=gene-CYJ02_RS07225;Name=CYJ02_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07225;old_locus_tag=CYJ02_07225 NZ_PJUQ01000012.1 Protein Homology CDS 9498 10106 . + 0 ID=cds-WP_014613119.1;Parent=gene-CYJ02_RS07225;Dbxref=GenBank:WP_014613119.1;Name=WP_014613119.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613119.1;locus_tag=CYJ02_RS07225;product=DNA-3-methyladenine glycosylase;protein_id=WP_014613119.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 10187 11521 . - . ID=gene-CYJ02_RS07230;Name=CYJ02_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07230;old_locus_tag=CYJ02_07230 NZ_PJUQ01000012.1 Protein Homology CDS 10187 11521 . - 0 ID=cds-WP_101431535.1;Parent=gene-CYJ02_RS07230;Dbxref=GenBank:WP_101431535.1;Name=WP_101431535.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613118.1;locus_tag=CYJ02_RS07230;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_101431535.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 11693 12508 . - . ID=gene-CYJ02_RS07235;Name=CYJ02_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07235;old_locus_tag=CYJ02_07235 NZ_PJUQ01000012.1 Protein Homology CDS 11693 12508 . - 0 ID=cds-WP_014613117.1;Parent=gene-CYJ02_RS07235;Dbxref=GenBank:WP_014613117.1;Name=WP_014613117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729569.1;locus_tag=CYJ02_RS07235;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_014613117.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 12505 13062 . - . ID=gene-CYJ02_RS07240;Name=CYJ02_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07240;old_locus_tag=CYJ02_07240 NZ_PJUQ01000012.1 Protein Homology CDS 12505 13062 . - 0 ID=cds-WP_070407365.1;Parent=gene-CYJ02_RS07240;Dbxref=GenBank:WP_070407365.1;Name=WP_070407365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167131.1;locus_tag=CYJ02_RS07240;product=HAAS signaling domain-containing protein;protein_id=WP_070407365.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 13059 13379 . - . ID=gene-CYJ02_RS07245;Name=CYJ02_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07245;old_locus_tag=CYJ02_07245 NZ_PJUQ01000012.1 Protein Homology CDS 13059 13379 . - 0 ID=cds-WP_014613115.1;Parent=gene-CYJ02_RS07245;Dbxref=GenBank:WP_014613115.1;Name=WP_014613115.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=CYJ02_RS07245;product=PadR family transcriptional regulator;protein_id=WP_014613115.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 13571 14356 . - . ID=gene-CYJ02_RS07250;Name=CYJ02_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07250;old_locus_tag=CYJ02_07250 NZ_PJUQ01000012.1 Protein Homology CDS 13571 14356 . - 0 ID=cds-WP_101431536.1;Parent=gene-CYJ02_RS07250;Dbxref=GenBank:WP_101431536.1;Name=WP_101431536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167129.1;locus_tag=CYJ02_RS07250;product=hypothetical protein;protein_id=WP_101431536.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 14491 15351 . + . ID=gene-CYJ02_RS07255;Name=CYJ02_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07255;old_locus_tag=CYJ02_07255 NZ_PJUQ01000012.1 Protein Homology CDS 14491 15351 . + 0 ID=cds-WP_015729572.1;Parent=gene-CYJ02_RS07255;Dbxref=GenBank:WP_015729572.1;Name=WP_015729572.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729572.1;locus_tag=CYJ02_RS07255;product=AraC family transcriptional regulator;protein_id=WP_015729572.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 15523 16734 . + . ID=gene-CYJ02_RS07260;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CYJ02_RS07260;old_locus_tag=CYJ02_07260 NZ_PJUQ01000012.1 Protein Homology CDS 15523 16734 . + 0 ID=cds-WP_101431537.1;Parent=gene-CYJ02_RS07260;Dbxref=GenBank:WP_101431537.1;Name=WP_101431537.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=CYJ02_RS07260;product=sodium/glutamate symporter;protein_id=WP_101431537.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 16761 17966 . - . ID=gene-CYJ02_RS07265;Name=CYJ02_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07265;old_locus_tag=CYJ02_07265 NZ_PJUQ01000012.1 Protein Homology CDS 16761 17966 . - 0 ID=cds-WP_101431538.1;Parent=gene-CYJ02_RS07265;Dbxref=GenBank:WP_101431538.1;Name=WP_101431538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169589.1;locus_tag=CYJ02_RS07265;product=GTP-binding protein;protein_id=WP_101431538.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 18140 19171 . - . ID=gene-CYJ02_RS07270;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=CYJ02_RS07270;old_locus_tag=CYJ02_07270 NZ_PJUQ01000012.1 Protein Homology CDS 18140 19171 . - 0 ID=cds-WP_063278987.1;Parent=gene-CYJ02_RS07270;Dbxref=GenBank:WP_063278987.1;Name=WP_063278987.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=CYJ02_RS07270;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_063278987.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 19347 19823 . + . ID=gene-CYJ02_RS07275;Name=CYJ02_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07275;old_locus_tag=CYJ02_07275 NZ_PJUQ01000012.1 Protein Homology CDS 19347 19823 . + 0 ID=cds-WP_015729576.1;Parent=gene-CYJ02_RS07275;Dbxref=GenBank:WP_015729576.1;Name=WP_015729576.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729576.1;locus_tag=CYJ02_RS07275;product=thioesterase family protein;protein_id=WP_015729576.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 19882 20868 . - . ID=gene-CYJ02_RS07280;Name=CYJ02_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07280;old_locus_tag=CYJ02_07280 NZ_PJUQ01000012.1 Protein Homology CDS 19882 20868 . - 0 ID=cds-WP_225550179.1;Parent=gene-CYJ02_RS07280;Dbxref=GenBank:WP_225550179.1;Name=WP_225550179.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=CYJ02_RS07280;product=PTS sugar transporter subunit IIC;protein_id=WP_225550179.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq pseudogene 20831 20914 . + . ID=gene-CYJ02_RS12765;Name=CYJ02_RS12765;end_range=20914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12765;partial=true;pseudo=true NZ_PJUQ01000012.1 Protein Homology CDS 20831 20914 . + 0 ID=cds-CYJ02_RS12765;Parent=gene-CYJ02_RS12765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=CYJ02_RS12765;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 21490 22392 . - . ID=gene-CYJ02_RS07285;Name=CYJ02_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07285;old_locus_tag=CYJ02_07285 NZ_PJUQ01000012.1 Protein Homology CDS 21490 22392 . - 0 ID=cds-WP_101431539.1;Parent=gene-CYJ02_RS07285;Dbxref=GenBank:WP_101431539.1;Name=WP_101431539.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613102.1;locus_tag=CYJ02_RS07285;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_101431539.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 22515 22850 . - . ID=gene-CYJ02_RS07290;Name=CYJ02_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07290;old_locus_tag=CYJ02_07290 NZ_PJUQ01000012.1 Protein Homology CDS 22515 22850 . - 0 ID=cds-WP_014613101.1;Parent=gene-CYJ02_RS07290;Dbxref=GenBank:WP_014613101.1;Name=WP_014613101.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613101.1;locus_tag=CYJ02_RS07290;product=thioredoxin family protein;protein_id=WP_014613101.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 23011 23643 . + . ID=gene-CYJ02_RS07295;Name=CYJ02_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07295;old_locus_tag=CYJ02_07295 NZ_PJUQ01000012.1 Protein Homology CDS 23011 23643 . + 0 ID=cds-WP_101431540.1;Parent=gene-CYJ02_RS07295;Dbxref=GenBank:WP_101431540.1;Name=WP_101431540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729578.1;locus_tag=CYJ02_RS07295;product=hypothetical protein;protein_id=WP_101431540.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 23769 24443 . - . ID=gene-CYJ02_RS07300;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07300;old_locus_tag=CYJ02_07300 NZ_PJUQ01000012.1 Protein Homology CDS 23769 24443 . - 0 ID=cds-WP_031253764.1;Parent=gene-CYJ02_RS07300;Dbxref=GenBank:WP_031253764.1;Name=WP_031253764.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613099.1;locus_tag=CYJ02_RS07300;product=thiaminase II;protein_id=WP_031253764.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 24537 25079 . - . ID=gene-CYJ02_RS07305;Name=CYJ02_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07305;old_locus_tag=CYJ02_07305 NZ_PJUQ01000012.1 Protein Homology CDS 24537 25079 . - 0 ID=cds-WP_037544134.1;Parent=gene-CYJ02_RS07305;Dbxref=GenBank:WP_037544134.1;Name=WP_037544134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613098.1;locus_tag=CYJ02_RS07305;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037544134.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 25557 26951 . - . ID=gene-CYJ02_RS07310;Name=CYJ02_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07310;old_locus_tag=CYJ02_07310 NZ_PJUQ01000012.1 Protein Homology CDS 25557 26951 . - 0 ID=cds-WP_100006714.1;Parent=gene-CYJ02_RS07310;Dbxref=GenBank:WP_100006714.1;Name=WP_100006714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=CYJ02_RS07310;product=TcaA NTF2-like domain-containing protein;protein_id=WP_100006714.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 27058 27522 . - . ID=gene-CYJ02_RS07315;Name=CYJ02_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07315;old_locus_tag=CYJ02_07315 NZ_PJUQ01000012.1 Protein Homology CDS 27058 27522 . - 0 ID=cds-WP_014613096.1;Parent=gene-CYJ02_RS07315;Dbxref=GenBank:WP_014613096.1;Name=WP_014613096.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169579.1;locus_tag=CYJ02_RS07315;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613096.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 27780 28616 . + . ID=gene-CYJ02_RS07320;Name=CYJ02_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07320;old_locus_tag=CYJ02_07320 NZ_PJUQ01000012.1 Protein Homology CDS 27780 28616 . + 0 ID=cds-WP_228064243.1;Parent=gene-CYJ02_RS07320;Dbxref=GenBank:WP_228064243.1;Name=WP_228064243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613095.1;locus_tag=CYJ02_RS07320;product=YdcF family protein;protein_id=WP_228064243.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 28747 29010 . + . ID=gene-CYJ02_RS12320;Name=CYJ02_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12320 NZ_PJUQ01000012.1 Protein Homology CDS 28747 29010 . + 0 ID=cds-WP_131087668.1;Parent=gene-CYJ02_RS12320;Dbxref=GenBank:WP_131087668.1;Name=WP_131087668.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: protein motif:HMM:NF015746.7;locus_tag=CYJ02_RS12320;product=AbgT family transporter;protein_id=WP_131087668.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 29053 29742 . - . ID=gene-CYJ02_RS07330;Name=CYJ02_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07330;old_locus_tag=CYJ02_07330 NZ_PJUQ01000012.1 Protein Homology CDS 29053 29742 . - 0 ID=cds-WP_014613093.1;Parent=gene-CYJ02_RS07330;Dbxref=GenBank:WP_014613093.1;Name=WP_014613093.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165509.1;locus_tag=CYJ02_RS07330;product=ABC transporter ATP-binding protein;protein_id=WP_014613093.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 29739 30803 . - . ID=gene-CYJ02_RS07335;Name=CYJ02_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07335;old_locus_tag=CYJ02_07335 NZ_PJUQ01000012.1 Protein Homology CDS 29739 30803 . - 0 ID=cds-WP_014613092.1;Parent=gene-CYJ02_RS07335;Dbxref=GenBank:WP_014613092.1;Name=WP_014613092.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613092.1;locus_tag=CYJ02_RS07335;product=ABC transporter permease;protein_id=WP_014613092.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 31651 32328 . + . ID=gene-CYJ02_RS07340;Name=CYJ02_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07340;old_locus_tag=CYJ02_07340 NZ_PJUQ01000012.1 Protein Homology CDS 31651 32328 . + 0 ID=cds-WP_101431541.1;Parent=gene-CYJ02_RS07340;Dbxref=GenBank:WP_101431541.1;Name=WP_101431541.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=CYJ02_RS07340;product=response regulator transcription factor;protein_id=WP_101431541.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 32321 33712 . + . ID=gene-CYJ02_RS07345;Name=CYJ02_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07345;old_locus_tag=CYJ02_07345 NZ_PJUQ01000012.1 Protein Homology CDS 32321 33712 . + 0 ID=cds-WP_101431542.1;Parent=gene-CYJ02_RS07345;Dbxref=GenBank:WP_101431542.1;Name=WP_101431542.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219799.1;locus_tag=CYJ02_RS07345;product=sensor histidine kinase;protein_id=WP_101431542.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 34064 35569 . - . ID=gene-CYJ02_RS07350;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CYJ02_RS07350;old_locus_tag=CYJ02_07350 NZ_PJUQ01000012.1 Protein Homology CDS 34064 35569 . - 0 ID=cds-WP_101431543.1;Parent=gene-CYJ02_RS07350;Dbxref=GenBank:WP_101431543.1;Name=WP_101431543.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=CYJ02_RS07350;product=malate dehydrogenase (quinone);protein_id=WP_101431543.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 35996 37171 . + . ID=gene-CYJ02_RS07355;Name=CYJ02_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07355;old_locus_tag=CYJ02_07355 NZ_PJUQ01000012.1 Protein Homology CDS 35996 37171 . + 0 ID=cds-WP_101431544.1;Parent=gene-CYJ02_RS07355;Dbxref=GenBank:WP_101431544.1;Name=WP_101431544.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=CYJ02_RS07355;product=glycosyltransferase family 4 protein;protein_id=WP_101431544.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 37639 39243 . - . ID=gene-CYJ02_RS07360;Name=CYJ02_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07360;old_locus_tag=CYJ02_07360 NZ_PJUQ01000012.1 Protein Homology CDS 37639 39243 . - 0 ID=cds-WP_063278990.1;Parent=gene-CYJ02_RS07360;Dbxref=GenBank:WP_063278990.1;Name=WP_063278990.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165503.1;locus_tag=CYJ02_RS07360;product=L-lactate permease;protein_id=WP_063278990.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 39696 40400 . - . ID=gene-CYJ02_RS07365;Name=CYJ02_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07365;old_locus_tag=CYJ02_07365 NZ_PJUQ01000012.1 Protein Homology CDS 39696 40400 . - 0 ID=cds-WP_020219801.1;Parent=gene-CYJ02_RS07365;Dbxref=GenBank:WP_020219801.1;Name=WP_020219801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=CYJ02_RS07365;product=hypothetical protein;protein_id=WP_020219801.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 40505 41023 . - . ID=gene-CYJ02_RS07370;Name=CYJ02_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07370;old_locus_tag=CYJ02_07370 NZ_PJUQ01000012.1 Protein Homology CDS 40505 41023 . - 0 ID=cds-WP_101431545.1;Parent=gene-CYJ02_RS07370;Dbxref=GenBank:WP_101431545.1;Name=WP_101431545.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729588.1;locus_tag=CYJ02_RS07370;product=GNAT family N-acetyltransferase;protein_id=WP_101431545.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 41155 42150 . + . ID=gene-CYJ02_RS07375;Name=CYJ02_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07375;old_locus_tag=CYJ02_07375 NZ_PJUQ01000012.1 Protein Homology CDS 41155 42150 . + 0 ID=cds-WP_015729589.1;Parent=gene-CYJ02_RS07375;Dbxref=GenBank:WP_015729589.1;Name=WP_015729589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=CYJ02_RS07375;product=oxidoreductase;protein_id=WP_015729589.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 42387 43730 . + . ID=gene-CYJ02_RS07380;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=CYJ02_RS07380;old_locus_tag=CYJ02_07380 NZ_PJUQ01000012.1 Protein Homology CDS 42387 43730 . + 0 ID=cds-WP_014613082.1;Parent=gene-CYJ02_RS07380;Dbxref=GenBank:WP_014613082.1;Name=WP_014613082.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=CYJ02_RS07380;product=glucose transporter GlcP;protein_id=WP_014613082.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 43917 44945 . + . ID=gene-CYJ02_RS07385;Name=CYJ02_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07385;old_locus_tag=CYJ02_07385 NZ_PJUQ01000012.1 Protein Homology CDS 43917 44945 . + 0 ID=cds-WP_101431546.1;Parent=gene-CYJ02_RS07385;Dbxref=GenBank:WP_101431546.1;Name=WP_101431546.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165498.1;locus_tag=CYJ02_RS07385;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101431546.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 44966 45382 . + . ID=gene-CYJ02_RS07390;Name=CYJ02_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07390;old_locus_tag=CYJ02_07390 NZ_PJUQ01000012.1 Protein Homology CDS 44966 45382 . + 0 ID=cds-WP_014613080.1;Parent=gene-CYJ02_RS07390;Dbxref=GenBank:WP_014613080.1;Name=WP_014613080.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729591.1;locus_tag=CYJ02_RS07390;product=GNAT family N-acetyltransferase;protein_id=WP_014613080.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 45460 45918 . - . ID=gene-CYJ02_RS07395;Name=CYJ02_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07395;old_locus_tag=CYJ02_07395 NZ_PJUQ01000012.1 Protein Homology CDS 45460 45918 . - 0 ID=cds-WP_014613078.1;Parent=gene-CYJ02_RS07395;Dbxref=GenBank:WP_014613078.1;Name=WP_014613078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165496.1;locus_tag=CYJ02_RS07395;product=DUF2871 domain-containing protein;protein_id=WP_014613078.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 46126 46329 . - . ID=gene-CYJ02_RS07400;Name=CYJ02_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07400;old_locus_tag=CYJ02_07400 NZ_PJUQ01000012.1 Protein Homology CDS 46126 46329 . - 0 ID=cds-WP_014613077.1;Parent=gene-CYJ02_RS07400;Dbxref=GenBank:WP_014613077.1;Name=WP_014613077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219804.1;locus_tag=CYJ02_RS07400;product=hypothetical protein;protein_id=WP_014613077.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 46632 48287 . - . ID=gene-CYJ02_RS07405;Name=CYJ02_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07405;old_locus_tag=CYJ02_07405 NZ_PJUQ01000012.1 Protein Homology CDS 46632 48287 . - 0 ID=cds-WP_096533529.1;Parent=gene-CYJ02_RS07405;Dbxref=GenBank:WP_096533529.1;Name=WP_096533529.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385453.1;locus_tag=CYJ02_RS07405;product=Na/Pi cotransporter family protein;protein_id=WP_096533529.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 48698 49162 . + . ID=gene-CYJ02_RS07410;Name=CYJ02_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07410;old_locus_tag=CYJ02_07410 NZ_PJUQ01000012.1 Protein Homology CDS 48698 49162 . + 0 ID=cds-WP_101431547.1;Parent=gene-CYJ02_RS07410;Dbxref=GenBank:WP_101431547.1;Name=WP_101431547.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=CYJ02_RS07410;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_101431547.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 49159 50097 . + . ID=gene-CYJ02_RS07415;Name=CYJ02_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07415;old_locus_tag=CYJ02_07415 NZ_PJUQ01000012.1 Protein Homology CDS 49159 50097 . + 0 ID=cds-WP_101431548.1;Parent=gene-CYJ02_RS07415;Dbxref=GenBank:WP_101431548.1;Name=WP_101431548.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=CYJ02_RS07415;product=magnesium transporter CorA family protein;protein_id=WP_101431548.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 50795 52234 . - . ID=gene-CYJ02_RS07420;Name=CYJ02_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07420;old_locus_tag=CYJ02_07420 NZ_PJUQ01000012.1 Protein Homology CDS 50795 52234 . - 0 ID=cds-WP_101431549.1;Parent=gene-CYJ02_RS07420;Dbxref=GenBank:WP_101431549.1;Name=WP_101431549.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166076.1;locus_tag=CYJ02_RS07420;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_101431549.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 52808 54901 . + . ID=gene-CYJ02_RS07425;Name=CYJ02_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07425;old_locus_tag=CYJ02_07425 NZ_PJUQ01000012.1 Protein Homology CDS 52808 54901 . + 0 ID=cds-WP_101431550.1;Parent=gene-CYJ02_RS07425;Dbxref=GenBank:WP_101431550.1;Name=WP_101431550.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613072.1;locus_tag=CYJ02_RS07425;product=helix-turn-helix domain-containing protein;protein_id=WP_101431550.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 54987 56180 . - . ID=gene-CYJ02_RS07430;Name=CYJ02_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07430;old_locus_tag=CYJ02_07430 NZ_PJUQ01000012.1 Protein Homology CDS 54987 56180 . - 0 ID=cds-WP_101431551.1;Parent=gene-CYJ02_RS07430;Dbxref=GenBank:WP_101431551.1;Name=WP_101431551.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=CYJ02_RS07430;product=CynX/NimT family MFS transporter;protein_id=WP_101431551.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 56464 56799 . + . ID=gene-CYJ02_RS07435;Name=CYJ02_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07435;old_locus_tag=CYJ02_07435 NZ_PJUQ01000012.1 Protein Homology CDS 56464 56799 . + 0 ID=cds-WP_014613070.1;Parent=gene-CYJ02_RS07435;Dbxref=GenBank:WP_014613070.1;Name=WP_014613070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613070.1;locus_tag=CYJ02_RS07435;product=DUF4889 domain-containing protein;protein_id=WP_014613070.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 57154 58059 . - . ID=gene-CYJ02_RS07440;Name=CYJ02_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07440;old_locus_tag=CYJ02_07440 NZ_PJUQ01000012.1 Protein Homology CDS 57154 58059 . - 0 ID=cds-WP_065354031.1;Parent=gene-CYJ02_RS07440;Dbxref=GenBank:WP_065354031.1;Name=WP_065354031.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613069.1;locus_tag=CYJ02_RS07440;product=EamA family transporter;protein_id=WP_065354031.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 58231 59304 . - . ID=gene-CYJ02_RS07445;Name=CYJ02_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07445;old_locus_tag=CYJ02_07445 NZ_PJUQ01000012.1 Protein Homology CDS 58231 59304 . - 0 ID=cds-WP_063278996.1;Parent=gene-CYJ02_RS07445;Dbxref=GenBank:WP_063278996.1;Name=WP_063278996.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=CYJ02_RS07445;product=M42 family metallopeptidase;protein_id=WP_063278996.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 59485 60432 . + . ID=gene-CYJ02_RS07450;Name=CYJ02_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07450;old_locus_tag=CYJ02_07450 NZ_PJUQ01000012.1 Protein Homology CDS 59485 60432 . + 0 ID=cds-WP_014613067.1;Parent=gene-CYJ02_RS07450;Dbxref=GenBank:WP_014613067.1;Name=WP_014613067.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613067.1;locus_tag=CYJ02_RS07450;product=lactate/malate family dehydrogenase;protein_id=WP_014613067.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 60600 60956 . - . ID=gene-CYJ02_RS07455;Name=CYJ02_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07455;old_locus_tag=CYJ02_07455 NZ_PJUQ01000012.1 Protein Homology CDS 60600 60956 . - 0 ID=cds-WP_014613066.1;Parent=gene-CYJ02_RS07455;Dbxref=GenBank:WP_014613066.1;Name=WP_014613066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=CYJ02_RS07455;product=DUF3139 domain-containing protein;protein_id=WP_014613066.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 61140 62738 . + . ID=gene-CYJ02_RS07460;Name=CYJ02_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07460;old_locus_tag=CYJ02_07460 NZ_PJUQ01000012.1 Protein Homology CDS 61140 62738 . + 0 ID=cds-WP_101431552.1;Parent=gene-CYJ02_RS07460;Dbxref=GenBank:WP_101431552.1;Name=WP_101431552.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729598.1;locus_tag=CYJ02_RS07460;product=M20 family metallopeptidase;protein_id=WP_101431552.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 62852 64030 . - . ID=gene-CYJ02_RS07465;Name=CYJ02_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07465;old_locus_tag=CYJ02_07465 NZ_PJUQ01000012.1 Protein Homology CDS 62852 64030 . - 0 ID=cds-WP_014613064.1;Parent=gene-CYJ02_RS07465;Dbxref=GenBank:WP_014613064.1;Name=WP_014613064.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613064.1;locus_tag=CYJ02_RS07465;product=nitrate/nitrite transporter;protein_id=WP_014613064.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq pseudogene 64280 64435 . - . ID=gene-CYJ02_RS13050;Name=CYJ02_RS13050;end_range=64435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13050;partial=true;pseudo=true NZ_PJUQ01000012.1 Protein Homology CDS 64280 64435 . - 0 ID=cds-CYJ02_RS13050;Parent=gene-CYJ02_RS13050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=64435,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020567.7;locus_tag=CYJ02_RS13050;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 65089 65739 . - . ID=gene-CYJ02_RS07475;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07475;old_locus_tag=CYJ02_07475 NZ_PJUQ01000012.1 Protein Homology CDS 65089 65739 . - 0 ID=cds-WP_014613059.1;Parent=gene-CYJ02_RS07475;Dbxref=GenBank:WP_014613059.1;Name=WP_014613059.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=CYJ02_RS07475;product=nitrate respiration regulation response regulator NreC;protein_id=WP_014613059.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 65758 66792 . - . ID=gene-CYJ02_RS07480;Name=CYJ02_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07480;old_locus_tag=CYJ02_07480 NZ_PJUQ01000012.1 Protein Homology CDS 65758 66792 . - 0 ID=cds-WP_014613058.1;Parent=gene-CYJ02_RS07480;Dbxref=GenBank:WP_014613058.1;Name=WP_014613058.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613058.1;locus_tag=CYJ02_RS07480;product=sensor histidine kinase;protein_id=WP_014613058.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 66792 67253 . - . ID=gene-CYJ02_RS07485;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07485;old_locus_tag=CYJ02_07485 NZ_PJUQ01000012.1 Protein Homology CDS 66792 67253 . - 0 ID=cds-WP_014613057.1;Parent=gene-CYJ02_RS07485;Dbxref=GenBank:WP_014613057.1;Name=WP_014613057.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613057.1;locus_tag=CYJ02_RS07485;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_014613057.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 67269 67946 . - . ID=gene-CYJ02_RS07490;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CYJ02_RS07490;old_locus_tag=CYJ02_07490 NZ_PJUQ01000012.1 Protein Homology CDS 67269 67946 . - 0 ID=cds-WP_014613056.1;Parent=gene-CYJ02_RS07490;Dbxref=GenBank:WP_014613056.1;Name=WP_014613056.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=CYJ02_RS07490;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014613056.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 67939 68514 . - . ID=gene-CYJ02_RS07495;Name=CYJ02_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07495;old_locus_tag=CYJ02_07495 NZ_PJUQ01000012.1 Protein Homology CDS 67939 68514 . - 0 ID=cds-WP_014613055.1;Parent=gene-CYJ02_RS07495;Dbxref=GenBank:WP_014613055.1;Name=WP_014613055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=CYJ02_RS07495;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014613055.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 68507 70063 . - . ID=gene-CYJ02_RS07500;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CYJ02_RS07500;old_locus_tag=CYJ02_07500 NZ_PJUQ01000012.1 Protein Homology CDS 68507 70063 . - 0 ID=cds-WP_101431553.1;Parent=gene-CYJ02_RS07500;Dbxref=GenBank:WP_101431553.1;Name=WP_101431553.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=CYJ02_RS07500;product=nitrate reductase subunit beta;protein_id=WP_101431553.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 70053 73724 . - . ID=gene-CYJ02_RS07505;Name=CYJ02_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07505;old_locus_tag=CYJ02_07505 NZ_PJUQ01000012.1 Protein Homology CDS 70053 73724 . - 0 ID=cds-WP_014613053.1;Parent=gene-CYJ02_RS07505;Dbxref=GenBank:WP_014613053.1;Name=WP_014613053.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CYJ02_RS07505;product=nitrate reductase subunit alpha;protein_id=WP_014613053.1;transl_table=11 NZ_PJUQ01000012.1 RefSeq gene 75071 75429 . - . ID=gene-CYJ02_RS07510;Name=CYJ02_RS07510;end_range=75429,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07510;old_locus_tag=CYJ02_07510;partial=true NZ_PJUQ01000012.1 Protein Homology CDS 75071 75429 . - 2 ID=cds-WP_157929433.1;Parent=gene-CYJ02_RS07510;Dbxref=GenBank:WP_157929433.1;Name=WP_157929433.1;Ontology_term=GO:0140359,GO:0016020;end_range=75429,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF013245.7;locus_tag=CYJ02_RS07510;partial=true;product=ABC transporter permease;protein_id=WP_157929433.1;transl_table=11 ##sequence-region NZ_PJUQ01000013.1 1 62045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000013.1 RefSeq region 1 62045 . + . ID=NZ_PJUQ01000013.1:1..62045;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000013.1 RefSeq gene 16 92 . - . ID=gene-CYJ02_RS07515;Name=CYJ02_RS07515;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS07515;old_locus_tag=CYJ02_07515 NZ_PJUQ01000013.1 tRNAscan-SE tRNA 16 92 . - . ID=rna-CYJ02_RS07515;Parent=gene-CYJ02_RS07515;anticodon=(pos:complement(56..58));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07515;product=tRNA-Asp NZ_PJUQ01000013.1 tRNAscan-SE exon 16 92 . - . ID=exon-CYJ02_RS07515-1;Parent=rna-CYJ02_RS07515;anticodon=(pos:complement(56..58));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07515;product=tRNA-Asp NZ_PJUQ01000013.1 RefSeq gene 107 180 . - . ID=gene-CYJ02_RS07520;Name=CYJ02_RS07520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS07520;old_locus_tag=CYJ02_07520 NZ_PJUQ01000013.1 tRNAscan-SE tRNA 107 180 . - . ID=rna-CYJ02_RS07520;Parent=gene-CYJ02_RS07520;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07520;product=tRNA-Met NZ_PJUQ01000013.1 tRNAscan-SE exon 107 180 . - . ID=exon-CYJ02_RS07520-1;Parent=rna-CYJ02_RS07520;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07520;product=tRNA-Met NZ_PJUQ01000013.1 RefSeq gene 198 290 . - . ID=gene-CYJ02_RS07525;Name=CYJ02_RS07525;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS07525;old_locus_tag=CYJ02_07525 NZ_PJUQ01000013.1 tRNAscan-SE tRNA 198 290 . - . ID=rna-CYJ02_RS07525;Parent=gene-CYJ02_RS07525;anticodon=(pos:complement(252..254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07525;product=tRNA-Ser NZ_PJUQ01000013.1 tRNAscan-SE exon 198 290 . - . ID=exon-CYJ02_RS07525-1;Parent=rna-CYJ02_RS07525;anticodon=(pos:complement(252..254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS07525;product=tRNA-Ser NZ_PJUQ01000013.1 RefSeq gene 357 1814 . - . ID=gene-CYJ02_RS07530;Name=CYJ02_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07530;old_locus_tag=CYJ02_07530 NZ_PJUQ01000013.1 Protein Homology CDS 357 1814 . - 0 ID=cds-WP_015728583.1;Parent=gene-CYJ02_RS07530;Dbxref=GenBank:WP_015728583.1;Name=WP_015728583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503578.1;locus_tag=CYJ02_RS07530;product=glutamate synthase subunit beta;protein_id=WP_015728583.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 1827 6332 . - . ID=gene-CYJ02_RS07535;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07535;old_locus_tag=CYJ02_07535 NZ_PJUQ01000013.1 Protein Homology CDS 1827 6332 . - 0 ID=cds-WP_101431555.1;Parent=gene-CYJ02_RS07535;Dbxref=GenBank:WP_101431555.1;Name=WP_101431555.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=CYJ02_RS07535;product=glutamate synthase large subunit;protein_id=WP_101431555.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 6455 7333 . + . ID=gene-CYJ02_RS07540;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07540;old_locus_tag=CYJ02_07540 NZ_PJUQ01000013.1 Protein Homology CDS 6455 7333 . + 0 ID=cds-WP_020220086.1;Parent=gene-CYJ02_RS07540;Dbxref=GenBank:WP_020220086.1;Name=WP_020220086.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=CYJ02_RS07540;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_020220086.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 7346 8455 . + . ID=gene-CYJ02_RS07545;Name=CYJ02_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07545;old_locus_tag=CYJ02_07545 NZ_PJUQ01000013.1 Protein Homology CDS 7346 8455 . + 0 ID=cds-WP_099987168.1;Parent=gene-CYJ02_RS07545;Dbxref=GenBank:WP_099987168.1;Name=WP_099987168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614836.1;locus_tag=CYJ02_RS07545;product=YibE/F family protein;protein_id=WP_099987168.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 8452 9225 . + . ID=gene-CYJ02_RS07550;Name=CYJ02_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07550;old_locus_tag=CYJ02_07550 NZ_PJUQ01000013.1 Protein Homology CDS 8452 9225 . + 0 ID=cds-WP_014614837.1;Parent=gene-CYJ02_RS07550;Dbxref=GenBank:WP_014614837.1;Name=WP_014614837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=CYJ02_RS07550;product=YibE/F family protein;protein_id=WP_014614837.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 9274 11535 . + . ID=gene-CYJ02_RS07555;Name=CYJ02_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07555;old_locus_tag=CYJ02_07555 NZ_PJUQ01000013.1 Protein Homology CDS 9274 11535 . + 0 ID=cds-WP_101431556.1;Parent=gene-CYJ02_RS07555;Dbxref=GenBank:WP_101431556.1;Name=WP_101431556.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166373.1;locus_tag=CYJ02_RS07555;product=ATP-binding cassette domain-containing protein;protein_id=WP_101431556.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 11743 12258 . - . ID=gene-CYJ02_RS07560;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07560;old_locus_tag=CYJ02_07560 NZ_PJUQ01000013.1 Protein Homology CDS 11743 12258 . - 0 ID=cds-WP_014614839.1;Parent=gene-CYJ02_RS07560;Dbxref=GenBank:WP_014614839.1;Name=WP_014614839.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=CYJ02_RS07560;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_014614839.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 12563 12838 . + . ID=gene-CYJ02_RS07565;Name=CYJ02_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07565;old_locus_tag=CYJ02_07565 NZ_PJUQ01000013.1 Protein Homology CDS 12563 12838 . + 0 ID=cds-WP_015728571.1;Parent=gene-CYJ02_RS07565;Dbxref=GenBank:WP_015728571.1;Name=WP_015728571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728571.1;locus_tag=CYJ02_RS07565;product=hypothetical protein;protein_id=WP_015728571.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 13224 14231 . - . ID=gene-CYJ02_RS07570;Name=CYJ02_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07570;old_locus_tag=CYJ02_07570 NZ_PJUQ01000013.1 Protein Homology CDS 13224 14231 . - 0 ID=cds-WP_014614841.1;Parent=gene-CYJ02_RS07570;Dbxref=GenBank:WP_014614841.1;Name=WP_014614841.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498204.1;locus_tag=CYJ02_RS07570;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614841.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 14569 14850 . - . ID=gene-CYJ02_RS07575;Name=CYJ02_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07575;old_locus_tag=CYJ02_07575 NZ_PJUQ01000013.1 Protein Homology CDS 14569 14850 . - 0 ID=cds-WP_201800462.1;Parent=gene-CYJ02_RS07575;Dbxref=GenBank:WP_201800462.1;Name=WP_201800462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166378.1;locus_tag=CYJ02_RS07575;product=hypothetical protein;protein_id=WP_201800462.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 15371 16513 . - . ID=gene-CYJ02_RS07580;Name=CYJ02_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07580;old_locus_tag=CYJ02_07580 NZ_PJUQ01000013.1 Protein Homology CDS 15371 16513 . - 0 ID=cds-WP_014614844.1;Parent=gene-CYJ02_RS07580;Dbxref=GenBank:WP_014614844.1;Name=WP_014614844.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036666.1;locus_tag=CYJ02_RS07580;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_014614844.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 16506 17411 . - . ID=gene-CYJ02_RS07585;Name=CYJ02_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07585;old_locus_tag=CYJ02_07585 NZ_PJUQ01000013.1 Protein Homology CDS 16506 17411 . - 0 ID=cds-WP_014614845.1;Parent=gene-CYJ02_RS07585;Dbxref=GenBank:WP_014614845.1;Name=WP_014614845.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=CYJ02_RS07585;product=PLP-dependent cysteine synthase family protein;protein_id=WP_014614845.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 17694 19019 . + . ID=gene-CYJ02_RS07590;Name=CYJ02_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07590;old_locus_tag=CYJ02_07590 NZ_PJUQ01000013.1 Protein Homology CDS 17694 19019 . + 0 ID=cds-WP_101431557.1;Parent=gene-CYJ02_RS07590;Dbxref=GenBank:WP_101431557.1;Name=WP_101431557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166897.1;locus_tag=CYJ02_RS07590;product=carboxylesterase family protein;protein_id=WP_101431557.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 19169 20497 . - . ID=gene-CYJ02_RS07595;Name=CYJ02_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07595;old_locus_tag=CYJ02_07595 NZ_PJUQ01000013.1 Protein Homology CDS 19169 20497 . - 0 ID=cds-WP_014614848.1;Parent=gene-CYJ02_RS07595;Dbxref=GenBank:WP_014614848.1;Name=WP_014614848.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169210.1;locus_tag=CYJ02_RS07595;product=sodium-dependent transporter;protein_id=WP_014614848.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 20681 20869 . + . ID=gene-CYJ02_RS07600;Name=CYJ02_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07600;old_locus_tag=CYJ02_07600 NZ_PJUQ01000013.1 Protein Homology CDS 20681 20869 . + 0 ID=cds-WP_014614849.1;Parent=gene-CYJ02_RS07600;Dbxref=GenBank:WP_014614849.1;Name=WP_014614849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614849.1;locus_tag=CYJ02_RS07600;product=hypothetical protein;protein_id=WP_014614849.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 21062 21751 . - . ID=gene-CYJ02_RS07605;Name=CYJ02_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07605;old_locus_tag=CYJ02_07605 NZ_PJUQ01000013.1 Protein Homology CDS 21062 21751 . - 0 ID=cds-WP_014614850.1;Parent=gene-CYJ02_RS07605;Dbxref=GenBank:WP_014614850.1;Name=WP_014614850.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166900.1;locus_tag=CYJ02_RS07605;product=response regulator transcription factor;protein_id=WP_014614850.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 21765 24398 . - . ID=gene-CYJ02_RS07610;Name=CYJ02_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07610;old_locus_tag=CYJ02_07610 NZ_PJUQ01000013.1 Protein Homology CDS 21765 24398 . - 0 ID=cds-WP_418080458.1;Parent=gene-CYJ02_RS07610;Dbxref=GenBank:WP_418080458.1;Name=WP_418080458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001647432.1;locus_tag=CYJ02_RS07610;product=ATP-binding protein;protein_id=WP_418080458.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 24557 24637 . + . ID=gene-CYJ02_RS13055;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CYJ02_RS13055;old_locus_tag=CYJ02_07615 NZ_PJUQ01000013.1 Protein Homology CDS 24557 24637 . + 0 ID=cds-WP_064485063.1;Parent=gene-CYJ02_RS13055;Dbxref=GenBank:WP_064485063.1;Name=WP_064485063.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=CYJ02_RS13055;product=K(+)-transporting ATPase subunit F;protein_id=WP_064485063.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 24663 26339 . + . ID=gene-CYJ02_RS07620;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07620;old_locus_tag=CYJ02_07620 NZ_PJUQ01000013.1 Protein Homology CDS 24663 26339 . + 0 ID=cds-WP_101431559.1;Parent=gene-CYJ02_RS07620;Dbxref=GenBank:WP_101431559.1;Name=WP_101431559.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402656.1;locus_tag=CYJ02_RS07620;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_101431559.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 26355 28379 . + . ID=gene-CYJ02_RS07625;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07625;old_locus_tag=CYJ02_07625 NZ_PJUQ01000013.1 Protein Homology CDS 26355 28379 . + 0 ID=cds-WP_014614853.1;Parent=gene-CYJ02_RS07625;Dbxref=GenBank:WP_014614853.1;Name=WP_014614853.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546595.1;locus_tag=CYJ02_RS07625;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_014614853.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 28390 28950 . + . ID=gene-CYJ02_RS07630;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07630;old_locus_tag=CYJ02_07630 NZ_PJUQ01000013.1 Protein Homology CDS 28390 28950 . + 0 ID=cds-WP_099987172.1;Parent=gene-CYJ02_RS07630;Dbxref=GenBank:WP_099987172.1;Name=WP_099987172.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728563.1;locus_tag=CYJ02_RS07630;product=K(+)-transporting ATPase subunit C;protein_id=WP_099987172.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq pseudogene 29067 29706 . - . ID=gene-CYJ02_RS07635;Name=CYJ02_RS07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS07635;old_locus_tag=CYJ02_07635;pseudo=true NZ_PJUQ01000013.1 Protein Homology CDS 29067 29706 . - 0 ID=cds-CYJ02_RS07635;Parent=gene-CYJ02_RS07635;Note=frameshifted;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450207.1;locus_tag=CYJ02_RS07635;product=FMN-dependent NADH-azoreductase;pseudo=true;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 29972 30799 . - . ID=gene-CYJ02_RS07640;Name=CYJ02_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07640;old_locus_tag=CYJ02_07640 NZ_PJUQ01000013.1 Protein Homology CDS 29972 30799 . - 0 ID=cds-WP_390174110.1;Parent=gene-CYJ02_RS07640;Dbxref=GenBank:WP_390174110.1;Name=WP_390174110.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=CYJ02_RS07640;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_390174110.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 30789 33413 . - . ID=gene-CYJ02_RS07645;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=CYJ02_RS07645;old_locus_tag=CYJ02_07645 NZ_PJUQ01000013.1 Protein Homology CDS 30789 33413 . - 0 ID=cds-WP_101431561.1;Parent=gene-CYJ02_RS07645;Dbxref=GenBank:WP_101431561.1;Name=WP_101431561.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728560.1;locus_tag=CYJ02_RS07645;product=pyruvate%2C phosphate dikinase;protein_id=WP_101431561.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 33565 33840 . + . ID=gene-CYJ02_RS12515;Name=CYJ02_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12515;old_locus_tag=CYJ02_07650 NZ_PJUQ01000013.1 GeneMarkS-2+ CDS 33565 33840 . + 0 ID=cds-WP_241900534.1;Parent=gene-CYJ02_RS12515;Dbxref=GenBank:WP_241900534.1;Name=WP_241900534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12515;product=hypothetical protein;protein_id=WP_241900534.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 34408 35907 . + . ID=gene-CYJ02_RS07655;Name=CYJ02_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07655;old_locus_tag=CYJ02_07655 NZ_PJUQ01000013.1 Protein Homology CDS 34408 35907 . + 0 ID=cds-WP_101431562.1;Parent=gene-CYJ02_RS07655;Dbxref=GenBank:WP_101431562.1;Name=WP_101431562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728558.1;locus_tag=CYJ02_RS07655;product=coagulase domain-containing protein;protein_id=WP_101431562.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 36101 36802 . + . ID=gene-CYJ02_RS07660;Name=CYJ02_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07660;old_locus_tag=CYJ02_07660 NZ_PJUQ01000013.1 Protein Homology CDS 36101 36802 . + 0 ID=cds-WP_101431563.1;Parent=gene-CYJ02_RS07660;Dbxref=GenBank:WP_101431563.1;Name=WP_101431563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110168517.1;locus_tag=CYJ02_RS07660;product=exotoxin SpEX;protein_id=WP_101431563.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 37699 39786 . + . ID=gene-CYJ02_RS07665;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ02_RS07665;old_locus_tag=CYJ02_07665 NZ_PJUQ01000013.1 Protein Homology CDS 37699 39786 . + 0 ID=cds-WP_100006587.1;Parent=gene-CYJ02_RS07665;Dbxref=GenBank:WP_100006587.1;Name=WP_100006587.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612947.1;locus_tag=CYJ02_RS07665;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_100006587.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 40619 41794 . - . ID=gene-CYJ02_RS07670;Name=CYJ02_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07670;old_locus_tag=CYJ02_07670 NZ_PJUQ01000013.1 Protein Homology CDS 40619 41794 . - 0 ID=cds-WP_063279093.1;Parent=gene-CYJ02_RS07670;Dbxref=GenBank:WP_063279093.1;Name=WP_063279093.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=CYJ02_RS07670;product=ABC transporter permease;protein_id=WP_063279093.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 41778 42473 . - . ID=gene-CYJ02_RS07675;Name=CYJ02_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07675;old_locus_tag=CYJ02_07675 NZ_PJUQ01000013.1 Protein Homology CDS 41778 42473 . - 0 ID=cds-WP_014612945.1;Parent=gene-CYJ02_RS07675;Dbxref=GenBank:WP_014612945.1;Name=WP_014612945.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612945.1;locus_tag=CYJ02_RS07675;product=ABC transporter ATP-binding protein;protein_id=WP_014612945.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 42470 43522 . - . ID=gene-CYJ02_RS07680;Name=CYJ02_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07680;old_locus_tag=CYJ02_07680 NZ_PJUQ01000013.1 Protein Homology CDS 42470 43522 . - 0 ID=cds-WP_014612944.1;Parent=gene-CYJ02_RS07680;Dbxref=GenBank:WP_014612944.1;Name=WP_014612944.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729651.1;locus_tag=CYJ02_RS07680;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014612944.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 43630 44271 . - . ID=gene-CYJ02_RS07685;Name=CYJ02_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07685;old_locus_tag=CYJ02_07685 NZ_PJUQ01000013.1 Protein Homology CDS 43630 44271 . - 0 ID=cds-WP_101431564.1;Parent=gene-CYJ02_RS07685;Dbxref=GenBank:WP_101431564.1;Name=WP_101431564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166327.1;locus_tag=CYJ02_RS07685;product=hypothetical protein;protein_id=WP_101431564.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 44449 45051 . + . ID=gene-CYJ02_RS07690;Name=CYJ02_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07690;old_locus_tag=CYJ02_07690 NZ_PJUQ01000013.1 Protein Homology CDS 44449 45051 . + 0 ID=cds-WP_063279096.1;Parent=gene-CYJ02_RS07690;Dbxref=GenBank:WP_063279096.1;Name=WP_063279096.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729653.1;locus_tag=CYJ02_RS07690;product=YIP1 family protein;protein_id=WP_063279096.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 45110 45562 . - . ID=gene-CYJ02_RS07695;Name=CYJ02_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07695;old_locus_tag=CYJ02_07695 NZ_PJUQ01000013.1 Protein Homology CDS 45110 45562 . - 0 ID=cds-WP_101431565.1;Parent=gene-CYJ02_RS07695;Dbxref=GenBank:WP_101431565.1;Name=WP_101431565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612941.1;locus_tag=CYJ02_RS07695;product=DUF1648 domain-containing protein;protein_id=WP_101431565.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 45549 46412 . - . ID=gene-CYJ02_RS07700;Name=CYJ02_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07700;old_locus_tag=CYJ02_07700 NZ_PJUQ01000013.1 Protein Homology CDS 45549 46412 . - 0 ID=cds-WP_096538186.1;Parent=gene-CYJ02_RS07700;Dbxref=GenBank:WP_096538186.1;Name=WP_096538186.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=CYJ02_RS07700;product=fructosamine kinase family protein;protein_id=WP_096538186.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 46525 47187 . + . ID=gene-CYJ02_RS07705;Name=CYJ02_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07705;old_locus_tag=CYJ02_07705 NZ_PJUQ01000013.1 Protein Homology CDS 46525 47187 . + 0 ID=cds-WP_014612939.1;Parent=gene-CYJ02_RS07705;Dbxref=GenBank:WP_014612939.1;Name=WP_014612939.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166323.1;locus_tag=CYJ02_RS07705;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014612939.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 47523 48512 . + . ID=gene-CYJ02_RS07710;Name=CYJ02_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07710;old_locus_tag=CYJ02_07710 NZ_PJUQ01000013.1 Protein Homology CDS 47523 48512 . + 0 ID=cds-WP_063279099.1;Parent=gene-CYJ02_RS07710;Dbxref=GenBank:WP_063279099.1;Name=WP_063279099.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166322.1;locus_tag=CYJ02_RS07710;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_063279099.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 48531 48974 . + . ID=gene-CYJ02_RS07715;Name=CYJ02_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07715;old_locus_tag=CYJ02_07715 NZ_PJUQ01000013.1 Protein Homology CDS 48531 48974 . + 0 ID=cds-WP_014612937.1;Parent=gene-CYJ02_RS07715;Dbxref=GenBank:WP_014612937.1;Name=WP_014612937.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612937.1;locus_tag=CYJ02_RS07715;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_014612937.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 48987 50486 . + . ID=gene-CYJ02_RS07720;Name=CYJ02_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07720;old_locus_tag=CYJ02_07720 NZ_PJUQ01000013.1 Protein Homology CDS 48987 50486 . + 0 ID=cds-WP_063279100.1;Parent=gene-CYJ02_RS07720;Dbxref=GenBank:WP_063279100.1;Name=WP_063279100.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219451.1;locus_tag=CYJ02_RS07720;product=tripartite tricarboxylate transporter permease;protein_id=WP_063279100.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 50543 53065 . - . ID=gene-CYJ02_RS07725;Name=CYJ02_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07725;old_locus_tag=CYJ02_07725 NZ_PJUQ01000013.1 Protein Homology CDS 50543 53065 . - 0 ID=cds-WP_081247713.1;Parent=gene-CYJ02_RS07725;Dbxref=GenBank:WP_081247713.1;Name=WP_081247713.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612935.1;locus_tag=CYJ02_RS07725;product=glycosyltransferase;protein_id=WP_081247713.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 53270 54214 . - . ID=gene-CYJ02_RS07730;Name=CYJ02_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07730;old_locus_tag=CYJ02_07730 NZ_PJUQ01000013.1 Protein Homology CDS 53270 54214 . - 0 ID=cds-WP_063278906.1;Parent=gene-CYJ02_RS07730;Dbxref=GenBank:WP_063278906.1;Name=WP_063278906.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612934.1;locus_tag=CYJ02_RS07730;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_063278906.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 55220 56707 . - . ID=gene-CYJ02_RS07735;Name=CYJ02_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07735;old_locus_tag=CYJ02_07735 NZ_PJUQ01000013.1 Protein Homology CDS 55220 56707 . - 0 ID=cds-WP_063278905.1;Parent=gene-CYJ02_RS07735;Dbxref=GenBank:WP_063278905.1;Name=WP_063278905.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=CYJ02_RS07735;product=glycosyltransferase;protein_id=WP_063278905.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 57303 59474 . + . ID=gene-CYJ02_RS07740;Name=CYJ02_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07740;old_locus_tag=CYJ02_07740 NZ_PJUQ01000013.1 Protein Homology CDS 57303 59474 . + 0 ID=cds-WP_101431566.1;Parent=gene-CYJ02_RS07740;Dbxref=GenBank:WP_101431566.1;Name=WP_101431566.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ02_RS07740;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_101431566.1;transl_table=11 NZ_PJUQ01000013.1 RefSeq gene 59665 61836 . + . ID=gene-CYJ02_RS07745;Name=CYJ02_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07745;old_locus_tag=CYJ02_07745 NZ_PJUQ01000013.1 Protein Homology CDS 59665 61836 . + 0 ID=cds-WP_168250694.1;Parent=gene-CYJ02_RS07745;Dbxref=GenBank:WP_168250694.1;Name=WP_168250694.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ02_RS07745;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_168250694.1;transl_table=11 ##sequence-region NZ_PJUQ01000014.1 1 74028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000014.1 RefSeq region 1 74028 . + . ID=NZ_PJUQ01000014.1:1..74028;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000014.1 RefSeq pseudogene 41 262 . - . ID=gene-CYJ02_RS07750;Name=CYJ02_RS07750;end_range=262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS07750;old_locus_tag=CYJ02_07750;partial=true;pseudo=true NZ_PJUQ01000014.1 Protein Homology CDS 41 262 . - 0 ID=cds-CYJ02_RS07750;Parent=gene-CYJ02_RS07750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637866.1;locus_tag=CYJ02_RS07750;partial=true;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 795 2162 . - . ID=gene-CYJ02_RS07755;Name=CYJ02_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07755;old_locus_tag=CYJ02_07755 NZ_PJUQ01000014.1 Protein Homology CDS 795 2162 . - 0 ID=cds-WP_037542634.1;Parent=gene-CYJ02_RS07755;Dbxref=GenBank:WP_037542634.1;Name=WP_037542634.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ02_RS07755;product=ATP-binding cassette domain-containing protein;protein_id=WP_037542634.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 2176 3366 . - . ID=gene-CYJ02_RS07760;Name=CYJ02_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07760;old_locus_tag=CYJ02_07760 NZ_PJUQ01000014.1 Protein Homology CDS 2176 3366 . - 0 ID=cds-WP_014613465.1;Parent=gene-CYJ02_RS07760;Dbxref=GenBank:WP_014613465.1;Name=WP_014613465.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ02_RS07760;product=MFS transporter;protein_id=WP_014613465.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 3377 4420 . - . ID=gene-CYJ02_RS07765;Name=CYJ02_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07765;old_locus_tag=CYJ02_07765 NZ_PJUQ01000014.1 Protein Homology CDS 3377 4420 . - 0 ID=cds-WP_014613464.1;Parent=gene-CYJ02_RS07765;Dbxref=GenBank:WP_014613464.1;Name=WP_014613464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014661.7;locus_tag=CYJ02_RS07765;product=YcaO-like family protein;protein_id=WP_014613464.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 4473 5222 . - . ID=gene-CYJ02_RS07770;Name=CYJ02_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07770;old_locus_tag=CYJ02_07770 NZ_PJUQ01000014.1 GeneMarkS-2+ CDS 4473 5222 . - 0 ID=cds-WP_037542633.1;Parent=gene-CYJ02_RS07770;Dbxref=GenBank:WP_037542633.1;Name=WP_037542633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS07770;product=hypothetical protein;protein_id=WP_037542633.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 5537 6901 . - . ID=gene-CYJ02_RS07775;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CYJ02_RS07775;old_locus_tag=CYJ02_07775 NZ_PJUQ01000014.1 Protein Homology CDS 5537 6901 . - 0 ID=cds-WP_015729392.1;Parent=gene-CYJ02_RS07775;Dbxref=GenBank:WP_015729392.1;Name=WP_015729392.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613462.1;locus_tag=CYJ02_RS07775;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_015729392.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 7073 8005 . - . ID=gene-CYJ02_RS07780;Name=CYJ02_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07780;old_locus_tag=CYJ02_07780 NZ_PJUQ01000014.1 Protein Homology CDS 7073 8005 . - 0 ID=cds-WP_014613461.1;Parent=gene-CYJ02_RS07780;Dbxref=GenBank:WP_014613461.1;Name=WP_014613461.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=CYJ02_RS07780;product=diacylglycerol kinase;protein_id=WP_014613461.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 8683 10110 . - . ID=gene-CYJ02_RS07785;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07785;old_locus_tag=CYJ02_07785 NZ_PJUQ01000014.1 Protein Homology CDS 8683 10110 . - 0 ID=cds-WP_014613460.1;Parent=gene-CYJ02_RS07785;Dbxref=GenBank:WP_014613460.1;Name=WP_014613460.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=CYJ02_RS07785;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014613460.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 10124 11584 . - . ID=gene-CYJ02_RS07790;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07790;old_locus_tag=CYJ02_07790 NZ_PJUQ01000014.1 Protein Homology CDS 10124 11584 . - 0 ID=cds-WP_101431568.1;Parent=gene-CYJ02_RS07790;Dbxref=GenBank:WP_101431568.1;Name=WP_101431568.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CYJ02_RS07790;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_101431568.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 11587 11889 . - . ID=gene-CYJ02_RS07795;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07795;old_locus_tag=CYJ02_07795 NZ_PJUQ01000014.1 Protein Homology CDS 11587 11889 . - 0 ID=cds-WP_014613458.1;Parent=gene-CYJ02_RS07795;Dbxref=GenBank:WP_014613458.1;Name=WP_014613458.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=CYJ02_RS07795;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014613458.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 12244 13797 . + . ID=gene-CYJ02_RS07800;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CYJ02_RS07800;old_locus_tag=CYJ02_07800 NZ_PJUQ01000014.1 Protein Homology CDS 12244 13797 . + 0 ID=cds-WP_020219895.1;Parent=gene-CYJ02_RS07800;Dbxref=GenBank:WP_020219895.1;Name=WP_020219895.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219895.1;locus_tag=CYJ02_RS07800;product=sodium/proline symporter PutP;protein_id=WP_020219895.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 14186 15391 . - . ID=gene-CYJ02_RS07805;Name=CYJ02_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07805;old_locus_tag=CYJ02_07805 NZ_PJUQ01000014.1 Protein Homology CDS 14186 15391 . - 0 ID=cds-WP_014613456.1;Parent=gene-CYJ02_RS07805;Dbxref=GenBank:WP_014613456.1;Name=WP_014613456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664913.1;locus_tag=CYJ02_RS07805;product=CamS family sex pheromone protein;protein_id=WP_014613456.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 15403 17406 . - . ID=gene-CYJ02_RS07810;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07810;old_locus_tag=CYJ02_07810 NZ_PJUQ01000014.1 Protein Homology CDS 15403 17406 . - 0 ID=cds-WP_015729395.1;Parent=gene-CYJ02_RS07810;Dbxref=GenBank:WP_015729395.1;Name=WP_015729395.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166445.1;locus_tag=CYJ02_RS07810;product=NAD-dependent DNA ligase LigA;protein_id=WP_015729395.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 17410 19605 . - . ID=gene-CYJ02_RS07815;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS07815;old_locus_tag=CYJ02_07815 NZ_PJUQ01000014.1 Protein Homology CDS 17410 19605 . - 0 ID=cds-WP_065520431.1;Parent=gene-CYJ02_RS07815;Dbxref=GenBank:WP_065520431.1;Name=WP_065520431.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=CYJ02_RS07815;product=DNA helicase PcrA;protein_id=WP_065520431.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 19605 20294 . - . ID=gene-CYJ02_RS07820;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07820;old_locus_tag=CYJ02_07820 NZ_PJUQ01000014.1 Protein Homology CDS 19605 20294 . - 0 ID=cds-WP_014613453.1;Parent=gene-CYJ02_RS07820;Dbxref=GenBank:WP_014613453.1;Name=WP_014613453.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=CYJ02_RS07820;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_014613453.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 20971 21273 . - . ID=gene-CYJ02_RS07825;Name=CYJ02_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07825;old_locus_tag=CYJ02_07825 NZ_PJUQ01000014.1 Protein Homology CDS 20971 21273 . - 0 ID=cds-WP_014613451.1;Parent=gene-CYJ02_RS07825;Dbxref=GenBank:WP_014613451.1;Name=WP_014613451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166442.1;locus_tag=CYJ02_RS07825;product=YerC/YecD family TrpR-related protein;protein_id=WP_014613451.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 21341 22636 . - . ID=gene-CYJ02_RS07830;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CYJ02_RS07830;old_locus_tag=CYJ02_07830 NZ_PJUQ01000014.1 Protein Homology CDS 21341 22636 . - 0 ID=cds-WP_014613450.1;Parent=gene-CYJ02_RS07830;Dbxref=GenBank:WP_014613450.1;Name=WP_014613450.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275349.1;locus_tag=CYJ02_RS07830;product=adenylosuccinate lyase;protein_id=WP_014613450.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 23058 23246 . - . ID=gene-CYJ02_RS07835;Name=CYJ02_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07835;old_locus_tag=CYJ02_07835 NZ_PJUQ01000014.1 Protein Homology CDS 23058 23246 . - 0 ID=cds-WP_014613449.1;Parent=gene-CYJ02_RS07835;Dbxref=GenBank:WP_014613449.1;Name=WP_014613449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166440.1;locus_tag=CYJ02_RS07835;product=NETI motif-containing protein;protein_id=WP_014613449.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 23236 23805 . - . ID=gene-CYJ02_RS07840;Name=CYJ02_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07840;old_locus_tag=CYJ02_07840 NZ_PJUQ01000014.1 Protein Homology CDS 23236 23805 . - 0 ID=cds-WP_014613448.1;Parent=gene-CYJ02_RS07840;Dbxref=GenBank:WP_014613448.1;Name=WP_014613448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=CYJ02_RS07840;product=DUF2179 domain-containing protein;protein_id=WP_014613448.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 23867 24697 . - . ID=gene-CYJ02_RS07845;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CYJ02_RS07845;old_locus_tag=CYJ02_07845 NZ_PJUQ01000014.1 Protein Homology CDS 23867 24697 . - 0 ID=cds-WP_100007043.1;Parent=gene-CYJ02_RS07845;Dbxref=GenBank:WP_100007043.1;Name=WP_100007043.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384060.1;locus_tag=CYJ02_RS07845;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_100007043.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 24690 26165 . - . ID=gene-CYJ02_RS07850;Name=CYJ02_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07850;old_locus_tag=CYJ02_07850 NZ_PJUQ01000014.1 Protein Homology CDS 24690 26165 . - 0 ID=cds-WP_063284984.1;Parent=gene-CYJ02_RS07850;Dbxref=GenBank:WP_063284984.1;Name=WP_063284984.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169335.1;locus_tag=CYJ02_RS07850;product=nicotinate phosphoribosyltransferase;protein_id=WP_063284984.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 26797 27867 . + . ID=gene-CYJ02_RS07855;Name=CYJ02_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07855;old_locus_tag=CYJ02_07855 NZ_PJUQ01000014.1 Protein Homology CDS 26797 27867 . + 0 ID=cds-WP_063278577.1;Parent=gene-CYJ02_RS07855;Dbxref=GenBank:WP_063278577.1;Name=WP_063278577.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=CYJ02_RS07855;product=nitric oxide synthase oxygenase;protein_id=WP_063278577.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 27911 28714 . + . ID=gene-CYJ02_RS07860;Name=CYJ02_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07860;old_locus_tag=CYJ02_07860 NZ_PJUQ01000014.1 Protein Homology CDS 27911 28714 . + 0 ID=cds-WP_015729399.1;Parent=gene-CYJ02_RS07860;Dbxref=GenBank:WP_015729399.1;Name=WP_015729399.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804670.1;locus_tag=CYJ02_RS07860;product=prephenate dehydratase;protein_id=WP_015729399.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 28767 29873 . - . ID=gene-CYJ02_RS07865;Name=CYJ02_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07865;old_locus_tag=CYJ02_07865 NZ_PJUQ01000014.1 Protein Homology CDS 28767 29873 . - 0 ID=cds-WP_015729400.1;Parent=gene-CYJ02_RS07865;Dbxref=GenBank:WP_015729400.1;Name=WP_015729400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613443.1;locus_tag=CYJ02_RS07865;product=glycosyl hydrolase family 28-related protein;protein_id=WP_015729400.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 29954 30505 . + . ID=gene-CYJ02_RS07870;Name=CYJ02_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07870;old_locus_tag=CYJ02_07870 NZ_PJUQ01000014.1 Protein Homology CDS 29954 30505 . + 0 ID=cds-WP_014613442.1;Parent=gene-CYJ02_RS07870;Dbxref=GenBank:WP_014613442.1;Name=WP_014613442.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=CYJ02_RS07870;product=cysteine hydrolase family protein;protein_id=WP_014613442.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 30563 31489 . + . ID=gene-CYJ02_RS07875;Name=CYJ02_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07875;old_locus_tag=CYJ02_07875 NZ_PJUQ01000014.1 Protein Homology CDS 30563 31489 . + 0 ID=cds-WP_172425815.1;Parent=gene-CYJ02_RS07875;Dbxref=GenBank:WP_172425815.1;Name=WP_172425815.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445415.1;locus_tag=CYJ02_RS07875;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_172425815.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 31519 31800 . + . ID=gene-CYJ02_RS07880;Name=CYJ02_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07880;old_locus_tag=CYJ02_07880 NZ_PJUQ01000014.1 Protein Homology CDS 31519 31800 . + 0 ID=cds-WP_014613440.1;Parent=gene-CYJ02_RS07880;Dbxref=GenBank:WP_014613440.1;Name=WP_014613440.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166431.1;locus_tag=CYJ02_RS07880;product=GNAT family N-acetyltransferase;protein_id=WP_014613440.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 32070 33449 . + . ID=gene-CYJ02_RS07885;Name=CYJ02_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07885;old_locus_tag=CYJ02_07885 NZ_PJUQ01000014.1 Protein Homology CDS 32070 33449 . + 0 ID=cds-WP_096636789.1;Parent=gene-CYJ02_RS07885;Dbxref=GenBank:WP_096636789.1;Name=WP_096636789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219898.1;locus_tag=CYJ02_RS07885;product=aldehyde dehydrogenase;protein_id=WP_096636789.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 33556 34605 . - . ID=gene-CYJ02_RS07890;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=CYJ02_RS07890;old_locus_tag=CYJ02_07890 NZ_PJUQ01000014.1 Protein Homology CDS 33556 34605 . - 0 ID=cds-WP_096533555.1;Parent=gene-CYJ02_RS07890;Dbxref=GenBank:WP_096533555.1;Name=WP_096533555.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169327.1;locus_tag=CYJ02_RS07890;product=6-phosphogluconolactonase;protein_id=WP_096533555.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 34824 34997 . - . ID=gene-CYJ02_RS12520;Name=CYJ02_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12520 NZ_PJUQ01000014.1 Protein Homology CDS 34824 34997 . - 0 ID=cds-WP_014613437.1;Parent=gene-CYJ02_RS12520;Dbxref=GenBank:WP_014613437.1;Name=WP_014613437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613437.1;locus_tag=CYJ02_RS12520;product=hypothetical protein;protein_id=WP_014613437.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 35164 35553 . + . ID=gene-CYJ02_RS07895;Name=CYJ02_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07895;old_locus_tag=CYJ02_07895 NZ_PJUQ01000014.1 Protein Homology CDS 35164 35553 . + 0 ID=cds-WP_014613436.1;Parent=gene-CYJ02_RS07895;Dbxref=GenBank:WP_014613436.1;Name=WP_014613436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=CYJ02_RS07895;product=hypothetical protein;protein_id=WP_014613436.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq pseudogene 36266 37308 . + . ID=gene-CYJ02_RS07900;Name=CYJ02_RS07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS07900;old_locus_tag=CYJ02_07900;pseudo=true NZ_PJUQ01000014.1 Protein Homology CDS 36266 37308 . + 0 ID=cds-CYJ02_RS07900;Parent=gene-CYJ02_RS07900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613435.1;locus_tag=CYJ02_RS07900;product=C45 family autoproteolytic acyltransferase/hydolase;pseudo=true;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 37409 38251 . - . ID=gene-CYJ02_RS07905;Name=CYJ02_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07905;old_locus_tag=CYJ02_07905 NZ_PJUQ01000014.1 Protein Homology CDS 37409 38251 . - 0 ID=cds-WP_014613434.1;Parent=gene-CYJ02_RS07905;Dbxref=GenBank:WP_014613434.1;Name=WP_014613434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169323.1;locus_tag=CYJ02_RS07905;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_014613434.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 38248 38811 . - . ID=gene-CYJ02_RS07910;Name=CYJ02_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07910;old_locus_tag=CYJ02_07910 NZ_PJUQ01000014.1 Protein Homology CDS 38248 38811 . - 0 ID=cds-WP_014613433.1;Parent=gene-CYJ02_RS07910;Dbxref=GenBank:WP_014613433.1;Name=WP_014613433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=CYJ02_RS07910;product=HAAS signaling domain-containing protein;protein_id=WP_014613433.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 38990 39547 . + . ID=gene-CYJ02_RS07915;Name=CYJ02_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07915;old_locus_tag=CYJ02_07915 NZ_PJUQ01000014.1 Protein Homology CDS 38990 39547 . + 0 ID=cds-WP_014613432.1;Parent=gene-CYJ02_RS07915;Dbxref=GenBank:WP_014613432.1;Name=WP_014613432.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166424.1;locus_tag=CYJ02_RS07915;product=thioredoxin family protein;protein_id=WP_014613432.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 39635 40996 . - . ID=gene-CYJ02_RS07920;Name=CYJ02_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07920;old_locus_tag=CYJ02_07920 NZ_PJUQ01000014.1 Protein Homology CDS 39635 40996 . - 0 ID=cds-WP_014613431.1;Parent=gene-CYJ02_RS07920;Dbxref=GenBank:WP_014613431.1;Name=WP_014613431.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=CYJ02_RS07920;product=gluconate:H+ symporter;protein_id=WP_014613431.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 41007 42557 . - . ID=gene-CYJ02_RS07925;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CYJ02_RS07925;old_locus_tag=CYJ02_07925 NZ_PJUQ01000014.1 Protein Homology CDS 41007 42557 . - 0 ID=cds-WP_014613430.1;Parent=gene-CYJ02_RS07925;Dbxref=GenBank:WP_014613430.1;Name=WP_014613430.1;Ontology_term=GO:0009255,GO:0019521,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166422.1;locus_tag=CYJ02_RS07925;product=gluconokinase;protein_id=WP_014613430.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 42581 43258 . - . ID=gene-CYJ02_RS07930;Name=CYJ02_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07930;old_locus_tag=CYJ02_07930 NZ_PJUQ01000014.1 Protein Homology CDS 42581 43258 . - 0 ID=cds-WP_014613429.1;Parent=gene-CYJ02_RS07930;Dbxref=GenBank:WP_014613429.1;Name=WP_014613429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=CYJ02_RS07930;product=GntR family transcriptional regulator;protein_id=WP_014613429.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 43676 44404 . - . ID=gene-CYJ02_RS07935;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=CYJ02_RS07935;old_locus_tag=CYJ02_07935 NZ_PJUQ01000014.1 Protein Homology CDS 43676 44404 . - 0 ID=cds-WP_020219902.1;Parent=gene-CYJ02_RS07935;Dbxref=GenBank:WP_020219902.1;Name=WP_020219902.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613428.1;locus_tag=CYJ02_RS07935;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_020219902.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 44401 45276 . - . ID=gene-CYJ02_RS07940;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=CYJ02_RS07940;old_locus_tag=CYJ02_07940 NZ_PJUQ01000014.1 Protein Homology CDS 44401 45276 . - 0 ID=cds-WP_014613427.1;Parent=gene-CYJ02_RS07940;Dbxref=GenBank:WP_014613427.1;Name=WP_014613427.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166419.1;locus_tag=CYJ02_RS07940;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_014613427.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 45720 45893 . - . ID=gene-CYJ02_RS12525;Name=CYJ02_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12525 NZ_PJUQ01000014.1 Protein Homology CDS 45720 45893 . - 0 ID=cds-WP_014613426.1;Parent=gene-CYJ02_RS12525;Dbxref=GenBank:WP_014613426.1;Name=WP_014613426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166418.1;locus_tag=CYJ02_RS12525;product=SE1626 family protein;protein_id=WP_014613426.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 46152 46283 . - . ID=gene-CYJ02_RS13060;Name=CYJ02_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13060 NZ_PJUQ01000014.1 Protein Homology CDS 46152 46283 . - 0 ID=cds-WP_020219903.1;Parent=gene-CYJ02_RS13060;Dbxref=GenBank:WP_020219903.1;Name=WP_020219903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047567.1;locus_tag=CYJ02_RS13060;product=Trp-rich small protein;protein_id=WP_020219903.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 46497 47786 . + . ID=gene-CYJ02_RS07945;Name=CYJ02_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07945;old_locus_tag=CYJ02_07945 NZ_PJUQ01000014.1 Protein Homology CDS 46497 47786 . + 0 ID=cds-WP_015729405.1;Parent=gene-CYJ02_RS07945;Dbxref=GenBank:WP_015729405.1;Name=WP_015729405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=CYJ02_RS07945;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_015729405.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 47845 48669 . + . ID=gene-CYJ02_RS07950;Name=CYJ02_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07950;old_locus_tag=CYJ02_07950 NZ_PJUQ01000014.1 Protein Homology CDS 47845 48669 . + 0 ID=cds-WP_014613424.1;Parent=gene-CYJ02_RS07950;Dbxref=GenBank:WP_014613424.1;Name=WP_014613424.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=CYJ02_RS07950;product=SPL family radical SAM protein;protein_id=WP_014613424.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 48685 49206 . + . ID=gene-CYJ02_RS07955;Name=CYJ02_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07955;old_locus_tag=CYJ02_07955 NZ_PJUQ01000014.1 Protein Homology CDS 48685 49206 . + 0 ID=cds-WP_014613423.1;Parent=gene-CYJ02_RS07955;Dbxref=GenBank:WP_014613423.1;Name=WP_014613423.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613423.1;locus_tag=CYJ02_RS07955;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_014613423.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 49187 50419 . + . ID=gene-CYJ02_RS07960;Name=CYJ02_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07960;old_locus_tag=CYJ02_07960 NZ_PJUQ01000014.1 Protein Homology CDS 49187 50419 . + 0 ID=cds-WP_065520428.1;Parent=gene-CYJ02_RS07960;Dbxref=GenBank:WP_065520428.1;Name=WP_065520428.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166413.1;locus_tag=CYJ02_RS07960;product=acetylornithine deacetylase;protein_id=WP_065520428.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 50598 51020 . - . ID=gene-CYJ02_RS07965;Name=CYJ02_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07965;old_locus_tag=CYJ02_07965 NZ_PJUQ01000014.1 Protein Homology CDS 50598 51020 . - 0 ID=cds-WP_014613421.1;Parent=gene-CYJ02_RS07965;Dbxref=GenBank:WP_014613421.1;Name=WP_014613421.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613421.1;locus_tag=CYJ02_RS07965;product=GNAT family N-acetyltransferase;protein_id=WP_014613421.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 51430 53049 . - . ID=gene-CYJ02_RS07970;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CYJ02_RS07970;old_locus_tag=CYJ02_07970 NZ_PJUQ01000014.1 Protein Homology CDS 51430 53049 . - 0 ID=cds-WP_101431569.1;Parent=gene-CYJ02_RS07970;Dbxref=GenBank:WP_101431569.1;Name=WP_101431569.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CYJ02_RS07970;product=chaperonin GroEL;protein_id=WP_101431569.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 53098 53385 . - . ID=gene-CYJ02_RS07975;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=CYJ02_RS07975;old_locus_tag=CYJ02_07975 NZ_PJUQ01000014.1 Protein Homology CDS 53098 53385 . - 0 ID=cds-WP_015729412.1;Parent=gene-CYJ02_RS07975;Dbxref=GenBank:WP_015729412.1;Name=WP_015729412.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=CYJ02_RS07975;product=co-chaperone GroES;protein_id=WP_015729412.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 53555 54322 . + . ID=gene-CYJ02_RS07980;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS07980;old_locus_tag=CYJ02_07980 NZ_PJUQ01000014.1 Protein Homology CDS 53555 54322 . + 0 ID=cds-WP_015729413.1;Parent=gene-CYJ02_RS07980;Dbxref=GenBank:WP_015729413.1;Name=WP_015729413.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166409.1;locus_tag=CYJ02_RS07980;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_015729413.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 54435 55796 . - . ID=gene-CYJ02_RS07985;Name=CYJ02_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07985;old_locus_tag=CYJ02_07985 NZ_PJUQ01000014.1 Protein Homology CDS 54435 55796 . - 0 ID=cds-WP_101431570.1;Parent=gene-CYJ02_RS07985;Dbxref=GenBank:WP_101431570.1;Name=WP_101431570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613417.1;locus_tag=CYJ02_RS07985;product=SdrH family protein;protein_id=WP_101431570.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 55961 56764 . + . ID=gene-CYJ02_RS07990;Name=CYJ02_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07990;old_locus_tag=CYJ02_07990 NZ_PJUQ01000014.1 Protein Homology CDS 55961 56764 . + 0 ID=cds-WP_014613416.1;Parent=gene-CYJ02_RS07990;Dbxref=GenBank:WP_014613416.1;Name=WP_014613416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=CYJ02_RS07990;product=carbon-nitrogen family hydrolase;protein_id=WP_014613416.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 57049 57129 . - . ID=gene-CYJ02_RS13065;Name=CYJ02_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13065 NZ_PJUQ01000014.1 Protein Homology CDS 57049 57129 . - 0 ID=cds-WP_110161296.1;Parent=gene-CYJ02_RS13065;Dbxref=GenBank:WP_110161296.1;Name=WP_110161296.1;Note=Members of this family are produced with retention of the N-formyl-methionine at the N-terminus.;Ontology_term=GO:0019836,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: protein motif:HMM:NF017210.7;locus_tag=CYJ02_RS13065;product=delta-lysin family phenol-soluble modulin;protein_id=WP_110161296.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 57521 58087 . + . ID=gene-CYJ02_RS07995;Name=CYJ02_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS07995;old_locus_tag=CYJ02_07995 NZ_PJUQ01000014.1 Protein Homology CDS 57521 58087 . + 0 ID=cds-WP_020219910.1;Parent=gene-CYJ02_RS07995;Dbxref=GenBank:WP_020219910.1;Name=WP_020219910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613414.1;locus_tag=CYJ02_RS07995;product=accessory gene regulator AgrB;protein_id=WP_020219910.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 58089 58226 . + . ID=gene-CYJ02_RS08000;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=CYJ02_RS08000;old_locus_tag=CYJ02_08000 NZ_PJUQ01000014.1 Protein Homology CDS 58089 58226 . + 0 ID=cds-WP_020219911.1;Parent=gene-CYJ02_RS08000;Dbxref=GenBank:WP_020219911.1;Name=WP_020219911.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=CYJ02_RS08000;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_020219911.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 58249 59541 . + . ID=gene-CYJ02_RS08005;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08005;old_locus_tag=CYJ02_08005 NZ_PJUQ01000014.1 Protein Homology CDS 58249 59541 . + 0 ID=cds-WP_101431571.1;Parent=gene-CYJ02_RS08005;Dbxref=GenBank:WP_101431571.1;Name=WP_101431571.1;gbkey=CDS;gene=agrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729415.1;locus_tag=CYJ02_RS08005;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_101431571.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 59555 60271 . + . ID=gene-CYJ02_RS08010;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08010;old_locus_tag=CYJ02_08010 NZ_PJUQ01000014.1 Protein Homology CDS 59555 60271 . + 0 ID=cds-WP_037542586.1;Parent=gene-CYJ02_RS08010;Dbxref=GenBank:WP_037542586.1;Name=WP_037542586.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CYJ02_RS08010;product=quorum-sensing response regulator AgrA;protein_id=WP_037542586.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 60331 61275 . - . ID=gene-CYJ02_RS08015;Name=CYJ02_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08015;old_locus_tag=CYJ02_08015 NZ_PJUQ01000014.1 Protein Homology CDS 60331 61275 . - 0 ID=cds-WP_037542584.1;Parent=gene-CYJ02_RS08015;Dbxref=GenBank:WP_037542584.1;Name=WP_037542584.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166402.1;locus_tag=CYJ02_RS08015;product=carbohydrate kinase family protein;protein_id=WP_037542584.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 61279 62763 . - . ID=gene-CYJ02_RS08020;Name=CYJ02_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08020;old_locus_tag=CYJ02_08020 NZ_PJUQ01000014.1 Protein Homology CDS 61279 62763 . - 0 ID=cds-WP_101431572.1;Parent=gene-CYJ02_RS08020;Dbxref=GenBank:WP_101431572.1;Name=WP_101431572.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613409.1;locus_tag=CYJ02_RS08020;product=sucrose-6-phosphate hydrolase;protein_id=WP_101431572.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 62819 63766 . - . ID=gene-CYJ02_RS08025;Name=CYJ02_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08025;old_locus_tag=CYJ02_08025 NZ_PJUQ01000014.1 Protein Homology CDS 62819 63766 . - 0 ID=cds-WP_099997326.1;Parent=gene-CYJ02_RS08025;Dbxref=GenBank:WP_099997326.1;Name=WP_099997326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613408.1;locus_tag=CYJ02_RS08025;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_099997326.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 64760 65959 . - . ID=gene-CYJ02_RS08035;Name=CYJ02_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08035;old_locus_tag=CYJ02_08035 NZ_PJUQ01000014.1 Protein Homology CDS 64760 65959 . - 0 ID=cds-WP_070407750.1;Parent=gene-CYJ02_RS08035;Dbxref=GenBank:WP_070407750.1;Name=WP_070407750.1;Ontology_term=GO:0046148,GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;go_process=pigment biosynthetic process|0046148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613407.1;locus_tag=CYJ02_RS08035;product=cytochrome P450%2C cyclodipeptide synthase-associated;protein_id=WP_070407750.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 65943 66650 . - . ID=gene-CYJ02_RS08040;Name=CYJ02_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08040;old_locus_tag=CYJ02_08040 NZ_PJUQ01000014.1 Protein Homology CDS 65943 66650 . - 0 ID=cds-WP_037542576.1;Parent=gene-CYJ02_RS08040;Dbxref=GenBank:WP_037542576.1;Name=WP_037542576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276926.1;locus_tag=CYJ02_RS08040;product=tRNA-dependent cyclodipeptide synthase;protein_id=WP_037542576.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 66805 67284 . + . ID=gene-CYJ02_RS08045;Name=CYJ02_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08045;old_locus_tag=CYJ02_08045 NZ_PJUQ01000014.1 Protein Homology CDS 66805 67284 . + 0 ID=cds-WP_014613405.1;Parent=gene-CYJ02_RS08045;Dbxref=GenBank:WP_014613405.1;Name=WP_014613405.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613405.1;locus_tag=CYJ02_RS08045;product=MarR family transcriptional regulator;protein_id=WP_014613405.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 67265 68449 . + . ID=gene-CYJ02_RS08050;Name=CYJ02_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08050;old_locus_tag=CYJ02_08050 NZ_PJUQ01000014.1 Protein Homology CDS 67265 68449 . + 0 ID=cds-WP_037544160.1;Parent=gene-CYJ02_RS08050;Dbxref=GenBank:WP_037544160.1;Name=WP_037544160.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613404.1;locus_tag=CYJ02_RS08050;product=MFS transporter;protein_id=WP_037544160.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 68615 69262 . - . ID=gene-CYJ02_RS08055;Name=CYJ02_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08055;old_locus_tag=CYJ02_08055 NZ_PJUQ01000014.1 Protein Homology CDS 68615 69262 . - 0 ID=cds-WP_014613403.1;Parent=gene-CYJ02_RS08055;Dbxref=GenBank:WP_014613403.1;Name=WP_014613403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613403.1;locus_tag=CYJ02_RS08055;product=redox-sensing transcriptional repressor Rex;protein_id=WP_014613403.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 69416 71368 . + . ID=gene-CYJ02_RS08060;Name=CYJ02_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08060;old_locus_tag=CYJ02_08060 NZ_PJUQ01000014.1 Protein Homology CDS 69416 71368 . + 0 ID=cds-WP_101431573.1;Parent=gene-CYJ02_RS08060;Dbxref=GenBank:WP_101431573.1;Name=WP_101431573.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729418.1;locus_tag=CYJ02_RS08060;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_101431573.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq gene 71731 73314 . + . ID=gene-CYJ02_RS08065;Name=CYJ02_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08065;old_locus_tag=CYJ02_08065 NZ_PJUQ01000014.1 Protein Homology CDS 71731 73314 . + 0 ID=cds-WP_015729419.1;Parent=gene-CYJ02_RS08065;Dbxref=GenBank:WP_015729419.1;Name=WP_015729419.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613401.1;locus_tag=CYJ02_RS08065;product=MutS-related protein;protein_id=WP_015729419.1;transl_table=11 NZ_PJUQ01000014.1 RefSeq pseudogene 73843 74028 . + . ID=gene-CYJ02_RS12775;Name=CYJ02_RS12775;end_range=74028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12775;old_locus_tag=CYJ02_08070;partial=true;pseudo=true;start_range=.,73843 NZ_PJUQ01000014.1 Protein Homology CDS 73843 74028 . + 0 ID=cds-CYJ02_RS12775;Parent=gene-CYJ02_RS12775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=74028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ02_RS12775;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,73843;transl_table=11 ##sequence-region NZ_PJUQ01000015.1 1 48319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000015.1 RefSeq region 1 48319 . + . ID=NZ_PJUQ01000015.1:1..48319;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000015.1 RefSeq gene 502 1284 . - . ID=gene-CYJ02_RS08075;Name=CYJ02_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08075;old_locus_tag=CYJ02_08075 NZ_PJUQ01000015.1 Protein Homology CDS 502 1284 . - 0 ID=cds-WP_015729821.1;Parent=gene-CYJ02_RS08075;Dbxref=GenBank:WP_015729821.1;Name=WP_015729821.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=CYJ02_RS08075;product=MBL fold metallo-hydrolase;protein_id=WP_015729821.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 1307 2086 . - . ID=gene-CYJ02_RS08080;Name=CYJ02_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08080;old_locus_tag=CYJ02_08080 NZ_PJUQ01000015.1 Protein Homology CDS 1307 2086 . - 0 ID=cds-WP_014612684.1;Parent=gene-CYJ02_RS08080;Dbxref=GenBank:WP_014612684.1;Name=WP_014612684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=CYJ02_RS08080;product=two-component system regulatory protein YycI;protein_id=WP_014612684.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 2083 3420 . - . ID=gene-CYJ02_RS08085;Name=CYJ02_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08085;old_locus_tag=CYJ02_08085 NZ_PJUQ01000015.1 Protein Homology CDS 2083 3420 . - 0 ID=cds-WP_101431574.1;Parent=gene-CYJ02_RS08085;Dbxref=GenBank:WP_101431574.1;Name=WP_101431574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=CYJ02_RS08085;product=YycH family regulatory protein;protein_id=WP_101431574.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 3410 5242 . - . ID=gene-CYJ02_RS08090;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=CYJ02_RS08090;old_locus_tag=CYJ02_08090 NZ_PJUQ01000015.1 Protein Homology CDS 3410 5242 . - 0 ID=cds-WP_015729822.1;Parent=gene-CYJ02_RS08090;Dbxref=GenBank:WP_015729822.1;Name=WP_015729822.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612682.1;locus_tag=CYJ02_RS08090;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_015729822.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 5255 5956 . - . ID=gene-CYJ02_RS08095;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=CYJ02_RS08095;old_locus_tag=CYJ02_08095 NZ_PJUQ01000015.1 Protein Homology CDS 5255 5956 . - 0 ID=cds-WP_014612681.1;Parent=gene-CYJ02_RS08095;Dbxref=GenBank:WP_014612681.1;Name=WP_014612681.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=CYJ02_RS08095;product=response regulator YycF;protein_id=WP_014612681.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 6107 6445 . - . ID=gene-CYJ02_RS08100;Name=CYJ02_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08100;old_locus_tag=CYJ02_08100 NZ_PJUQ01000015.1 Protein Homology CDS 6107 6445 . - 0 ID=cds-WP_014612680.1;Parent=gene-CYJ02_RS08100;Dbxref=GenBank:WP_014612680.1;Name=WP_014612680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729823.1;locus_tag=CYJ02_RS08100;product=SdpI family protein;protein_id=WP_014612680.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 6884 6957 . - . ID=gene-CYJ02_RS08105;Name=CYJ02_RS08105;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS08105;old_locus_tag=CYJ02_08105 NZ_PJUQ01000015.1 tRNAscan-SE tRNA 6884 6957 . - . ID=rna-CYJ02_RS08105;Parent=gene-CYJ02_RS08105;anticodon=(pos:complement(6921..6923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08105;product=tRNA-Asp NZ_PJUQ01000015.1 tRNAscan-SE exon 6884 6957 . - . ID=exon-CYJ02_RS08105-1;Parent=rna-CYJ02_RS08105;anticodon=(pos:complement(6921..6923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08105;product=tRNA-Asp NZ_PJUQ01000015.1 RefSeq gene 6969 7042 . - . ID=gene-CYJ02_RS08110;Name=CYJ02_RS08110;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS08110;old_locus_tag=CYJ02_08110 NZ_PJUQ01000015.1 tRNAscan-SE tRNA 6969 7042 . - . ID=rna-CYJ02_RS08110;Parent=gene-CYJ02_RS08110;anticodon=(pos:complement(7006..7008));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08110;product=tRNA-Met NZ_PJUQ01000015.1 tRNAscan-SE exon 6969 7042 . - . ID=exon-CYJ02_RS08110-1;Parent=rna-CYJ02_RS08110;anticodon=(pos:complement(7006..7008));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08110;product=tRNA-Met NZ_PJUQ01000015.1 RefSeq gene 7153 7224 . - . ID=gene-CYJ02_RS08115;Name=CYJ02_RS08115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS08115;old_locus_tag=CYJ02_08115 NZ_PJUQ01000015.1 tRNAscan-SE tRNA 7153 7224 . - . ID=rna-CYJ02_RS08115;Parent=gene-CYJ02_RS08115;anticodon=(pos:complement(7189..7191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08115;product=tRNA-Glu NZ_PJUQ01000015.1 tRNAscan-SE exon 7153 7224 . - . ID=exon-CYJ02_RS08115-1;Parent=rna-CYJ02_RS08115;anticodon=(pos:complement(7189..7191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08115;product=tRNA-Glu NZ_PJUQ01000015.1 RefSeq gene 7331 8224 . + . ID=gene-CYJ02_RS08120;Name=CYJ02_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08120;old_locus_tag=CYJ02_08120 NZ_PJUQ01000015.1 Protein Homology CDS 7331 8224 . + 0 ID=cds-WP_065353909.1;Parent=gene-CYJ02_RS08120;Dbxref=GenBank:WP_065353909.1;Name=WP_065353909.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729824.1;locus_tag=CYJ02_RS08120;product=YitT family protein;protein_id=WP_065353909.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 8443 9726 . - . ID=gene-CYJ02_RS08125;Name=CYJ02_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08125;old_locus_tag=CYJ02_08125 NZ_PJUQ01000015.1 Protein Homology CDS 8443 9726 . - 0 ID=cds-WP_037541991.1;Parent=gene-CYJ02_RS08125;Dbxref=GenBank:WP_037541991.1;Name=WP_037541991.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CYJ02_RS08125;product=adenylosuccinate synthase;protein_id=WP_037541991.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 10098 11498 . - . ID=gene-CYJ02_RS08130;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08130;old_locus_tag=CYJ02_08130 NZ_PJUQ01000015.1 Protein Homology CDS 10098 11498 . - 0 ID=cds-WP_014612677.1;Parent=gene-CYJ02_RS08130;Dbxref=GenBank:WP_014612677.1;Name=WP_014612677.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=CYJ02_RS08130;product=replicative DNA helicase;protein_id=WP_014612677.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 11654 11857 . - . ID=gene-CYJ02_RS12780;Name=CYJ02_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12780;old_locus_tag=CYJ02_08135 NZ_PJUQ01000015.1 Protein Homology CDS 11654 11857 . - 0 ID=cds-WP_080552904.1;Parent=gene-CYJ02_RS12780;Dbxref=GenBank:WP_080552904.1;Name=WP_080552904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=CYJ02_RS12780;product=DUF6007 family protein;protein_id=WP_080552904.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 11959 12405 . - . ID=gene-CYJ02_RS08140;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CYJ02_RS08140;old_locus_tag=CYJ02_08140 NZ_PJUQ01000015.1 Protein Homology CDS 11959 12405 . - 0 ID=cds-WP_014612676.1;Parent=gene-CYJ02_RS08140;Dbxref=GenBank:WP_014612676.1;Name=WP_014612676.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=CYJ02_RS08140;product=50S ribosomal protein L9;protein_id=WP_014612676.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 12402 14369 . - . ID=gene-CYJ02_RS08145;Name=CYJ02_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08145;old_locus_tag=CYJ02_08145 NZ_PJUQ01000015.1 Protein Homology CDS 12402 14369 . - 0 ID=cds-WP_014612675.1;Parent=gene-CYJ02_RS08145;Dbxref=GenBank:WP_014612675.1;Name=WP_014612675.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CYJ02_RS08145;product=DHH family phosphoesterase;protein_id=WP_014612675.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 14374 15285 . - . ID=gene-CYJ02_RS08150;Name=CYJ02_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08150;old_locus_tag=CYJ02_08150 NZ_PJUQ01000015.1 Protein Homology CDS 14374 15285 . - 0 ID=cds-WP_096636813.1;Parent=gene-CYJ02_RS08150;Dbxref=GenBank:WP_096636813.1;Name=WP_096636813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=CYJ02_RS08150;product=DUF2232 domain-containing protein;protein_id=WP_096636813.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 15517 16482 . - . ID=gene-CYJ02_RS08155;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=CYJ02_RS08155;old_locus_tag=CYJ02_08155 NZ_PJUQ01000015.1 Protein Homology CDS 15517 16482 . - 0 ID=cds-WP_014612673.1;Parent=gene-CYJ02_RS08155;Dbxref=GenBank:WP_014612673.1;Name=WP_014612673.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=CYJ02_RS08155;product=homoserine O-acetyltransferase MetX;protein_id=WP_014612673.1;transl_table=11 NZ_PJUQ01000015.1 cmsearch riboswitch 16566 16670 . - . ID=id-NZ_PJUQ01000015.1:16566..16670;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000015.1 RefSeq gene 16737 17066 . - . ID=gene-CYJ02_RS08160;Name=CYJ02_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08160;old_locus_tag=CYJ02_08160 NZ_PJUQ01000015.1 Protein Homology CDS 16737 17066 . - 0 ID=cds-WP_014612672.1;Parent=gene-CYJ02_RS08160;Dbxref=GenBank:WP_014612672.1;Name=WP_014612672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166060.1;locus_tag=CYJ02_RS08160;product=AzlD domain-containing protein;protein_id=WP_014612672.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 17063 17755 . - . ID=gene-CYJ02_RS08165;Name=CYJ02_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08165;old_locus_tag=CYJ02_08165 NZ_PJUQ01000015.1 Protein Homology CDS 17063 17755 . - 0 ID=cds-WP_014612671.1;Parent=gene-CYJ02_RS08165;Dbxref=GenBank:WP_014612671.1;Name=WP_014612671.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498766.1;locus_tag=CYJ02_RS08165;product=AzlC family ABC transporter permease;protein_id=WP_014612671.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 18069 19349 . - . ID=gene-CYJ02_RS08170;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CYJ02_RS08170;old_locus_tag=CYJ02_08170 NZ_PJUQ01000015.1 Protein Homology CDS 18069 19349 . - 0 ID=cds-WP_015729830.1;Parent=gene-CYJ02_RS08170;Dbxref=GenBank:WP_015729830.1;Name=WP_015729830.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=CYJ02_RS08170;product=serine--tRNA ligase;protein_id=WP_015729830.1;transl_table=11 NZ_PJUQ01000015.1 cmsearch binding_site 19424 19617 . - . ID=id-NZ_PJUQ01000015.1:19424..19617;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000015.1 RefSeq gene 19667 21169 . - . ID=gene-CYJ02_RS08175;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CYJ02_RS08175;old_locus_tag=CYJ02_08175 NZ_PJUQ01000015.1 Protein Homology CDS 19667 21169 . - 0 ID=cds-WP_020219988.1;Parent=gene-CYJ02_RS08175;Dbxref=GenBank:WP_020219988.1;Name=WP_020219988.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729831.1;locus_tag=CYJ02_RS08175;product=histidine ammonia-lyase;protein_id=WP_020219988.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 21519 22334 . + . ID=gene-CYJ02_RS08180;Name=CYJ02_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08180;old_locus_tag=CYJ02_08180 NZ_PJUQ01000015.1 Protein Homology CDS 21519 22334 . + 0 ID=cds-WP_014612668.1;Parent=gene-CYJ02_RS08180;Dbxref=GenBank:WP_014612668.1;Name=WP_014612668.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612668.1;locus_tag=CYJ02_RS08180;product=NAD(P)H-hydrate dehydratase;protein_id=WP_014612668.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 22584 25220 . - . ID=gene-CYJ02_RS08185;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08185;old_locus_tag=CYJ02_08185 NZ_PJUQ01000015.1 Protein Homology CDS 22584 25220 . - 0 ID=cds-WP_015729832.1;Parent=gene-CYJ02_RS08185;Dbxref=GenBank:WP_015729832.1;Name=WP_015729832.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729832.1;locus_tag=CYJ02_RS08185;product=DNA gyrase subunit A;protein_id=WP_015729832.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 25256 27187 . - . ID=gene-CYJ02_RS08190;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08190;old_locus_tag=CYJ02_08190 NZ_PJUQ01000015.1 Protein Homology CDS 25256 27187 . - 0 ID=cds-WP_370863201.1;Parent=gene-CYJ02_RS08190;Dbxref=GenBank:WP_370863201.1;Name=WP_370863201.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=CYJ02_RS08190;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_370863201.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 27201 28316 . - . ID=gene-CYJ02_RS08195;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CYJ02_RS08195;old_locus_tag=CYJ02_08195 NZ_PJUQ01000015.1 Protein Homology CDS 27201 28316 . - 0 ID=cds-WP_014612665.1;Parent=gene-CYJ02_RS08195;Dbxref=GenBank:WP_014612665.1;Name=WP_014612665.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169017.1;locus_tag=CYJ02_RS08195;product=DNA replication/repair protein RecF;protein_id=WP_014612665.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 28313 28552 . - . ID=gene-CYJ02_RS08200;Name=CYJ02_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08200;old_locus_tag=CYJ02_08200 NZ_PJUQ01000015.1 Protein Homology CDS 28313 28552 . - 0 ID=cds-WP_019166052.1;Parent=gene-CYJ02_RS08200;Dbxref=GenBank:WP_019166052.1;Name=WP_019166052.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425730.1;locus_tag=CYJ02_RS08200;product=RNA-binding S4 domain-containing protein;protein_id=WP_019166052.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 28672 29361 . - . ID=gene-CYJ02_RS08205;Name=CYJ02_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08205;old_locus_tag=CYJ02_08205 NZ_PJUQ01000015.1 Protein Homology CDS 28672 29361 . - 0 ID=cds-WP_101431575.1;Parent=gene-CYJ02_RS08205;Dbxref=GenBank:WP_101431575.1;Name=WP_101431575.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729834.1;locus_tag=CYJ02_RS08205;product=DsbA family protein;protein_id=WP_101431575.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 29644 30777 . - . ID=gene-CYJ02_RS08210;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CYJ02_RS08210;old_locus_tag=CYJ02_08210 NZ_PJUQ01000015.1 Protein Homology CDS 29644 30777 . - 0 ID=cds-WP_014612662.1;Parent=gene-CYJ02_RS08210;Dbxref=GenBank:WP_014612662.1;Name=WP_014612662.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CYJ02_RS08210;product=DNA polymerase III subunit beta;protein_id=WP_014612662.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 30949 32292 . - . ID=gene-CYJ02_RS08215;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08215;old_locus_tag=CYJ02_08215 NZ_PJUQ01000015.1 Protein Homology CDS 30949 32292 . - 0 ID=cds-WP_015729836.1;Parent=gene-CYJ02_RS08215;Dbxref=GenBank:WP_015729836.1;Name=WP_015729836.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168324.1;locus_tag=CYJ02_RS08215;product=chromosomal replication initiator protein DnaA;protein_id=WP_015729836.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 32836 32973 . + . ID=gene-CYJ02_RS08220;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CYJ02_RS08220;old_locus_tag=CYJ02_08220 NZ_PJUQ01000015.1 Protein Homology CDS 32836 32973 . + 0 ID=cds-WP_000240855.1;Parent=gene-CYJ02_RS08220;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CYJ02_RS08220;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 33147 33494 . + . ID=gene-CYJ02_RS08225;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08225;old_locus_tag=CYJ02_08225 NZ_PJUQ01000015.1 Protein Homology CDS 33147 33494 . + 0 ID=cds-WP_015728500.1;Parent=gene-CYJ02_RS08225;Dbxref=GenBank:WP_015728500.1;Name=WP_015728500.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=CYJ02_RS08225;product=ribonuclease P protein component;protein_id=WP_015728500.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 33631 35052 . + . ID=gene-CYJ02_RS08230;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CYJ02_RS08230;old_locus_tag=CYJ02_08230 NZ_PJUQ01000015.1 Protein Homology CDS 33631 35052 . + 0 ID=cds-WP_101431576.1;Parent=gene-CYJ02_RS08230;Dbxref=GenBank:WP_101431576.1;Name=WP_101431576.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=CYJ02_RS08230;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_101431576.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 35071 36945 . + . ID=gene-CYJ02_RS08235;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08235;old_locus_tag=CYJ02_08235 NZ_PJUQ01000015.1 Protein Homology CDS 35071 36945 . + 0 ID=cds-WP_015728502.1;Parent=gene-CYJ02_RS08235;Dbxref=GenBank:WP_015728502.1;Name=WP_015728502.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=CYJ02_RS08235;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_015728502.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 36946 37665 . + . ID=gene-CYJ02_RS08240;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08240;old_locus_tag=CYJ02_08240 NZ_PJUQ01000015.1 Protein Homology CDS 36946 37665 . + 0 ID=cds-WP_015728503.1;Parent=gene-CYJ02_RS08240;Dbxref=GenBank:WP_015728503.1;Name=WP_015728503.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=CYJ02_RS08240;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_015728503.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 37703 38554 . + . ID=gene-CYJ02_RS08245;Name=CYJ02_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08245;old_locus_tag=CYJ02_08245 NZ_PJUQ01000015.1 Protein Homology CDS 37703 38554 . + 0 ID=cds-WP_014614952.1;Parent=gene-CYJ02_RS08245;Dbxref=GenBank:WP_014614952.1;Name=WP_014614952.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=CYJ02_RS08245;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014614952.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 39193 39507 . + . ID=gene-CYJ02_RS08250;Name=CYJ02_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08250;old_locus_tag=CYJ02_08250 NZ_PJUQ01000015.1 Protein Homology CDS 39193 39507 . + 0 ID=cds-WP_015728504.1;Parent=gene-CYJ02_RS08250;Dbxref=GenBank:WP_015728504.1;Name=WP_015728504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728504.1;locus_tag=CYJ02_RS08250;product=hypothetical protein;protein_id=WP_015728504.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 39657 39845 . + . ID=gene-CYJ02_RS08255;Name=CYJ02_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08255;old_locus_tag=CYJ02_08255 NZ_PJUQ01000015.1 Protein Homology CDS 39657 39845 . + 0 ID=cds-WP_080552883.1;Parent=gene-CYJ02_RS08255;Dbxref=GenBank:WP_080552883.1;Name=WP_080552883.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469691.1;locus_tag=CYJ02_RS08255;product=helix-turn-helix transcriptional regulator;protein_id=WP_080552883.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 39852 40355 . + . ID=gene-CYJ02_RS08260;Name=CYJ02_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08260;old_locus_tag=CYJ02_08260 NZ_PJUQ01000015.1 Protein Homology CDS 39852 40355 . + 0 ID=cds-WP_015728505.1;Parent=gene-CYJ02_RS08260;Dbxref=GenBank:WP_015728505.1;Name=WP_015728505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728505.1;locus_tag=CYJ02_RS08260;product=hypothetical protein;protein_id=WP_015728505.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 40419 41006 . - . ID=gene-CYJ02_RS08265;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=CYJ02_RS08265;old_locus_tag=CYJ02_08265 NZ_PJUQ01000015.1 Protein Homology CDS 40419 41006 . - 0 ID=cds-WP_014614947.1;Parent=gene-CYJ02_RS08265;Dbxref=GenBank:WP_014614947.1;Name=WP_014614947.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=CYJ02_RS08265;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_014614947.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 41028 41645 . - . ID=gene-CYJ02_RS08270;Name=CYJ02_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08270;old_locus_tag=CYJ02_08270 NZ_PJUQ01000015.1 Protein Homology CDS 41028 41645 . - 0 ID=cds-WP_014614946.1;Parent=gene-CYJ02_RS08270;Dbxref=GenBank:WP_014614946.1;Name=WP_014614946.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=CYJ02_RS08270;product=flavin reductase family protein;protein_id=WP_014614946.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 41691 42653 . - . ID=gene-CYJ02_RS08275;Name=CYJ02_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08275;old_locus_tag=CYJ02_08275 NZ_PJUQ01000015.1 Protein Homology CDS 41691 42653 . - 0 ID=cds-WP_014614945.1;Parent=gene-CYJ02_RS08275;Dbxref=GenBank:WP_014614945.1;Name=WP_014614945.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614945.1;locus_tag=CYJ02_RS08275;product=ring-cleaving dioxygenase;protein_id=WP_014614945.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 42736 43161 . - . ID=gene-CYJ02_RS08280;Name=CYJ02_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08280;old_locus_tag=CYJ02_08280 NZ_PJUQ01000015.1 Protein Homology CDS 42736 43161 . - 0 ID=cds-WP_014614944.1;Parent=gene-CYJ02_RS08280;Dbxref=GenBank:WP_014614944.1;Name=WP_014614944.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614944.1;locus_tag=CYJ02_RS08280;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014614944.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 43328 43603 . + . ID=gene-CYJ02_RS08285;Name=CYJ02_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08285;old_locus_tag=CYJ02_08285 NZ_PJUQ01000015.1 Protein Homology CDS 43328 43603 . + 0 ID=cds-WP_014614943.1;Parent=gene-CYJ02_RS08285;Dbxref=GenBank:WP_014614943.1;Name=WP_014614943.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168313.1;locus_tag=CYJ02_RS08285;product=GNAT family N-acetyltransferase;protein_id=WP_014614943.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 43681 44598 . - . ID=gene-CYJ02_RS08290;Name=CYJ02_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08290;old_locus_tag=CYJ02_08290 NZ_PJUQ01000015.1 Protein Homology CDS 43681 44598 . - 0 ID=cds-WP_014614942.1;Parent=gene-CYJ02_RS08290;Dbxref=GenBank:WP_014614942.1;Name=WP_014614942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614942.1;locus_tag=CYJ02_RS08290;product=DUF5996 family protein;protein_id=WP_014614942.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 45343 45798 . + . ID=gene-CYJ02_RS08295;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=CYJ02_RS08295;old_locus_tag=CYJ02_08295 NZ_PJUQ01000015.1 Protein Homology CDS 45343 45798 . + 0 ID=cds-WP_096548391.1;Parent=gene-CYJ02_RS08295;Dbxref=GenBank:WP_096548391.1;Name=WP_096548391.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=CYJ02_RS08295;product=urease accessory protein UreE;protein_id=WP_096548391.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 45791 46483 . + . ID=gene-CYJ02_RS08300;Name=CYJ02_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08300;old_locus_tag=CYJ02_08300 NZ_PJUQ01000015.1 Protein Homology CDS 45791 46483 . + 0 ID=cds-WP_020220251.1;Parent=gene-CYJ02_RS08300;Dbxref=GenBank:WP_020220251.1;Name=WP_020220251.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=CYJ02_RS08300;product=urease accessory protein UreF;protein_id=WP_020220251.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 46496 47107 . + . ID=gene-CYJ02_RS08305;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08305;old_locus_tag=CYJ02_08305 NZ_PJUQ01000015.1 Protein Homology CDS 46496 47107 . + 0 ID=cds-WP_014614939.1;Parent=gene-CYJ02_RS08305;Dbxref=GenBank:WP_014614939.1;Name=WP_014614939.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614939.1;locus_tag=CYJ02_RS08305;product=urease accessory protein UreG;protein_id=WP_014614939.1;transl_table=11 NZ_PJUQ01000015.1 RefSeq gene 47107 47940 . + . ID=gene-CYJ02_RS08310;Name=CYJ02_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08310;old_locus_tag=CYJ02_08310 NZ_PJUQ01000015.1 Protein Homology CDS 47107 47940 . + 0 ID=cds-WP_014614938.1;Parent=gene-CYJ02_RS08310;Dbxref=GenBank:WP_014614938.1;Name=WP_014614938.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=CYJ02_RS08310;product=urease accessory protein UreD;protein_id=WP_014614938.1;transl_table=11 ##sequence-region NZ_PJUQ01000016.1 1 54197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000016.1 RefSeq region 1 54197 . + . ID=NZ_PJUQ01000016.1:1..54197;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000016.1 RefSeq gene 1 1261 . - . ID=gene-CYJ02_RS08315;Name=CYJ02_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08315;old_locus_tag=CYJ02_08315;partial=true;start_range=.,1 NZ_PJUQ01000016.1 Protein Homology CDS 1 1261 . - 0 ID=cds-WP_101431577.1;Parent=gene-CYJ02_RS08315;Dbxref=GenBank:WP_101431577.1;Name=WP_101431577.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ02_RS08315;partial=true;product=ISL3 family transposase;protein_id=WP_101431577.1;start_range=.,1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 1362 2012 . - . ID=gene-CYJ02_RS08320;Name=CYJ02_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08320;old_locus_tag=CYJ02_08320 NZ_PJUQ01000016.1 GeneMarkS-2+ CDS 1362 2012 . - 0 ID=cds-WP_241901337.1;Parent=gene-CYJ02_RS08320;Dbxref=GenBank:WP_241901337.1;Name=WP_241901337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS08320;product=DUF418 domain-containing protein;protein_id=WP_241901337.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq pseudogene 2178 2530 . - . ID=gene-CYJ02_RS08325;Name=CYJ02_RS08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS08325;old_locus_tag=CYJ02_08325;pseudo=true NZ_PJUQ01000016.1 Protein Homology CDS 2178 2530 . - 0 ID=cds-CYJ02_RS08325;Parent=gene-CYJ02_RS08325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CYJ02_RS08325;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 2995 3603 . - . ID=gene-CYJ02_RS08330;Name=CYJ02_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08330;old_locus_tag=CYJ02_08330 NZ_PJUQ01000016.1 GeneMarkS-2+ CDS 2995 3603 . - 0 ID=cds-WP_014612729.1;Parent=gene-CYJ02_RS08330;Dbxref=GenBank:WP_014612729.1;Name=WP_014612729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS08330;product=hypothetical protein;protein_id=WP_014612729.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq pseudogene 3953 4561 . - . ID=gene-CYJ02_RS08335;Name=CYJ02_RS08335;end_range=4561,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS08335;old_locus_tag=CYJ02_08335;partial=true;pseudo=true NZ_PJUQ01000016.1 Protein Homology CDS 3953 4561 . - 0 ID=cds-CYJ02_RS08335;Parent=gene-CYJ02_RS08335;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;end_range=4561,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501032.1;locus_tag=CYJ02_RS08335;partial=true;product=protein rep;pseudo=true;transl_table=11 NZ_PJUQ01000016.1 RefSeq pseudogene 4673 4820 . - . ID=gene-CYJ02_RS08340;Name=CYJ02_RS08340;end_range=4820,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS08340;old_locus_tag=CYJ02_08340;partial=true;pseudo=true;start_range=.,4673 NZ_PJUQ01000016.1 Protein Homology CDS 4673 4820 . - 0 ID=cds-CYJ02_RS08340;Parent=gene-CYJ02_RS08340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4820,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ02_RS08340;partial=true;product=transposase;pseudo=true;start_range=.,4673;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 4831 5112 . - . ID=gene-CYJ02_RS08345;Name=CYJ02_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08345;old_locus_tag=CYJ02_08345 NZ_PJUQ01000016.1 Protein Homology CDS 4831 5112 . - 0 ID=cds-WP_014612727.1;Parent=gene-CYJ02_RS08345;Dbxref=GenBank:WP_014612727.1;Name=WP_014612727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612727.1;locus_tag=CYJ02_RS08345;product=hypothetical protein;protein_id=WP_014612727.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 5314 9636 . - . ID=gene-CYJ02_RS08350;Name=spsM;gbkey=Gene;gene=spsM;gene_biotype=protein_coding;locus_tag=CYJ02_RS08350;old_locus_tag=CYJ02_08350 NZ_PJUQ01000016.1 Protein Homology CDS 5314 9636 . - 0 ID=cds-WP_101431578.1;Parent=gene-CYJ02_RS08350;Dbxref=GenBank:WP_101431578.1;Name=WP_101431578.1;gbkey=CDS;gene=spsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612726.1;locus_tag=CYJ02_RS08350;product=LPXTG-anchored surface protein SpsM;protein_id=WP_101431578.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 10299 10856 . - . ID=gene-CYJ02_RS08355;Name=CYJ02_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08355;old_locus_tag=CYJ02_08355 NZ_PJUQ01000016.1 Protein Homology CDS 10299 10856 . - 0 ID=cds-WP_063278679.1;Parent=gene-CYJ02_RS08355;Dbxref=GenBank:WP_063278679.1;Name=WP_063278679.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165735.1;locus_tag=CYJ02_RS08355;product=NADPH-dependent FMN reductase;protein_id=WP_063278679.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 11239 11739 . + . ID=gene-CYJ02_RS08360;Name=CYJ02_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08360;old_locus_tag=CYJ02_08360 NZ_PJUQ01000016.1 Protein Homology CDS 11239 11739 . + 0 ID=cds-WP_014612724.1;Parent=gene-CYJ02_RS08360;Dbxref=GenBank:WP_014612724.1;Name=WP_014612724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612724.1;locus_tag=CYJ02_RS08360;product=YagU family protein;protein_id=WP_014612724.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 11794 12627 . - . ID=gene-CYJ02_RS08365;Name=CYJ02_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08365;old_locus_tag=CYJ02_08365 NZ_PJUQ01000016.1 Protein Homology CDS 11794 12627 . - 0 ID=cds-WP_101431579.1;Parent=gene-CYJ02_RS08365;Dbxref=GenBank:WP_101431579.1;Name=WP_101431579.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729791.1;locus_tag=CYJ02_RS08365;product=peptidoglycan recognition protein family protein;protein_id=WP_101431579.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 13222 13545 . + . ID=gene-CYJ02_RS08370;Name=CYJ02_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08370;old_locus_tag=CYJ02_08370 NZ_PJUQ01000016.1 Protein Homology CDS 13222 13545 . + 0 ID=cds-WP_014612722.1;Parent=gene-CYJ02_RS08370;Dbxref=GenBank:WP_014612722.1;Name=WP_014612722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165730.1;locus_tag=CYJ02_RS08370;product=magnetosome magnetite crystal formation protein family;protein_id=WP_014612722.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 13772 14644 . + . ID=gene-CYJ02_RS08375;Name=CYJ02_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08375;old_locus_tag=CYJ02_08375 NZ_PJUQ01000016.1 Protein Homology CDS 13772 14644 . + 0 ID=cds-WP_101431580.1;Parent=gene-CYJ02_RS08375;Dbxref=GenBank:WP_101431580.1;Name=WP_101431580.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220079.1;locus_tag=CYJ02_RS08375;product=ABC transporter ATP-binding protein;protein_id=WP_101431580.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 14641 15372 . + . ID=gene-CYJ02_RS08380;Name=CYJ02_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08380;old_locus_tag=CYJ02_08380 NZ_PJUQ01000016.1 Protein Homology CDS 14641 15372 . + 0 ID=cds-WP_015729794.1;Parent=gene-CYJ02_RS08380;Dbxref=GenBank:WP_015729794.1;Name=WP_015729794.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165728.1;locus_tag=CYJ02_RS08380;product=ABC transporter permease;protein_id=WP_015729794.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 15369 16469 . + . ID=gene-CYJ02_RS08385;Name=CYJ02_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08385;old_locus_tag=CYJ02_08385 NZ_PJUQ01000016.1 Protein Homology CDS 15369 16469 . + 0 ID=cds-WP_015729795.1;Parent=gene-CYJ02_RS08385;Dbxref=GenBank:WP_015729795.1;Name=WP_015729795.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165727.1;locus_tag=CYJ02_RS08385;product=sensor histidine kinase;protein_id=WP_015729795.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 16466 17068 . + . ID=gene-CYJ02_RS08390;Name=CYJ02_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08390;old_locus_tag=CYJ02_08390 NZ_PJUQ01000016.1 Protein Homology CDS 16466 17068 . + 0 ID=cds-WP_101431581.1;Parent=gene-CYJ02_RS08390;Dbxref=GenBank:WP_101431581.1;Name=WP_101431581.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=CYJ02_RS08390;product=response regulator transcription factor;protein_id=WP_101431581.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 17196 18068 . - . ID=gene-CYJ02_RS08395;Name=CYJ02_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08395;old_locus_tag=CYJ02_08395 NZ_PJUQ01000016.1 Protein Homology CDS 17196 18068 . - 0 ID=cds-WP_063278681.1;Parent=gene-CYJ02_RS08395;Dbxref=GenBank:WP_063278681.1;Name=WP_063278681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612721.1;locus_tag=CYJ02_RS08395;product=alpha/beta hydrolase;protein_id=WP_063278681.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 18186 18665 . - . ID=gene-CYJ02_RS08400;Name=CYJ02_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08400;old_locus_tag=CYJ02_08400 NZ_PJUQ01000016.1 Protein Homology CDS 18186 18665 . - 0 ID=cds-WP_014612720.1;Parent=gene-CYJ02_RS08400;Dbxref=GenBank:WP_014612720.1;Name=WP_014612720.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729798.1;locus_tag=CYJ02_RS08400;product=arginine repressor;protein_id=WP_014612720.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 19053 20288 . + . ID=gene-CYJ02_RS08405;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08405;old_locus_tag=CYJ02_08405 NZ_PJUQ01000016.1 Protein Homology CDS 19053 20288 . + 0 ID=cds-WP_014612719.1;Parent=gene-CYJ02_RS08405;Dbxref=GenBank:WP_014612719.1;Name=WP_014612719.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CYJ02_RS08405;product=arginine deiminase;protein_id=WP_014612719.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 20325 21332 . + . ID=gene-CYJ02_RS08410;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ02_RS08410;old_locus_tag=CYJ02_08410 NZ_PJUQ01000016.1 Protein Homology CDS 20325 21332 . + 0 ID=cds-WP_014612718.1;Parent=gene-CYJ02_RS08410;Dbxref=GenBank:WP_014612718.1;Name=WP_014612718.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=CYJ02_RS08410;product=ornithine carbamoyltransferase;protein_id=WP_014612718.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 21432 22862 . + . ID=gene-CYJ02_RS08415;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CYJ02_RS08415;old_locus_tag=CYJ02_08415 NZ_PJUQ01000016.1 Protein Homology CDS 21432 22862 . + 0 ID=cds-WP_014612717.1;Parent=gene-CYJ02_RS08415;Dbxref=GenBank:WP_014612717.1;Name=WP_014612717.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612717.1;locus_tag=CYJ02_RS08415;product=arginine-ornithine antiporter;protein_id=WP_014612717.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 22878 23819 . + . ID=gene-CYJ02_RS08420;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08420;old_locus_tag=CYJ02_08420 NZ_PJUQ01000016.1 Protein Homology CDS 22878 23819 . + 0 ID=cds-WP_101431582.1;Parent=gene-CYJ02_RS08420;Dbxref=GenBank:WP_101431582.1;Name=WP_101431582.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612716.1;locus_tag=CYJ02_RS08420;product=carbamate kinase;protein_id=WP_101431582.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 23838 24566 . + . ID=gene-CYJ02_RS08425;Name=CYJ02_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08425;old_locus_tag=CYJ02_08425 NZ_PJUQ01000016.1 Protein Homology CDS 23838 24566 . + 0 ID=cds-WP_015729800.1;Parent=gene-CYJ02_RS08425;Dbxref=GenBank:WP_015729800.1;Name=WP_015729800.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165719.1;locus_tag=CYJ02_RS08425;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015729800.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 25030 25764 . + . ID=gene-CYJ02_RS08430;Name=CYJ02_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08430;old_locus_tag=CYJ02_08430 NZ_PJUQ01000016.1 Protein Homology CDS 25030 25764 . + 0 ID=cds-WP_096548359.1;Parent=gene-CYJ02_RS08430;Dbxref=GenBank:WP_096548359.1;Name=WP_096548359.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220080.1;locus_tag=CYJ02_RS08430;product=NAD-dependent protein deacylase;protein_id=WP_096548359.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 25928 26398 . - . ID=gene-CYJ02_RS08435;Name=CYJ02_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08435;old_locus_tag=CYJ02_08435 NZ_PJUQ01000016.1 Protein Homology CDS 25928 26398 . - 0 ID=cds-WP_020220081.1;Parent=gene-CYJ02_RS08435;Dbxref=GenBank:WP_020220081.1;Name=WP_020220081.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612713.1;locus_tag=CYJ02_RS08435;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_020220081.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 26646 27812 . - . ID=gene-CYJ02_RS08440;Name=CYJ02_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08440;old_locus_tag=CYJ02_08440 NZ_PJUQ01000016.1 Protein Homology CDS 26646 27812 . - 0 ID=cds-WP_101431583.1;Parent=gene-CYJ02_RS08440;Dbxref=GenBank:WP_101431583.1;Name=WP_101431583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612712.1;locus_tag=CYJ02_RS08440;product=ArgE/DapE family deacylase;protein_id=WP_101431583.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 28378 29511 . - . ID=gene-CYJ02_RS08445;Name=CYJ02_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08445;old_locus_tag=CYJ02_08445 NZ_PJUQ01000016.1 Protein Homology CDS 28378 29511 . - 0 ID=cds-WP_015729803.1;Parent=gene-CYJ02_RS08445;Dbxref=GenBank:WP_015729803.1;Name=WP_015729803.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729803.1;locus_tag=CYJ02_RS08445;product=Fic family protein;protein_id=WP_015729803.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq pseudogene 29702 29839 . - . ID=gene-CYJ02_RS12785;Name=CYJ02_RS12785;end_range=29839,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12785;old_locus_tag=CYJ02_08450;partial=true;pseudo=true NZ_PJUQ01000016.1 Protein Homology CDS 29702 29839 . - 0 ID=cds-CYJ02_RS12785;Parent=gene-CYJ02_RS12785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;end_range=29839,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009223422.1;locus_tag=CYJ02_RS12785;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 30024 30380 . - . ID=gene-CYJ02_RS08455;Name=CYJ02_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08455;old_locus_tag=CYJ02_08455 NZ_PJUQ01000016.1 Protein Homology CDS 30024 30380 . - 0 ID=cds-WP_014612709.1;Parent=gene-CYJ02_RS08455;Dbxref=GenBank:WP_014612709.1;Name=WP_014612709.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467555.1;locus_tag=CYJ02_RS08455;product=DoxX family protein;protein_id=WP_014612709.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 30391 31395 . - . ID=gene-CYJ02_RS08460;Name=CYJ02_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08460;old_locus_tag=CYJ02_08460 NZ_PJUQ01000016.1 Protein Homology CDS 30391 31395 . - 0 ID=cds-WP_015729804.1;Parent=gene-CYJ02_RS08460;Dbxref=GenBank:WP_015729804.1;Name=WP_015729804.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434486.1;locus_tag=CYJ02_RS08460;product=NADP-dependent oxidoreductase;protein_id=WP_015729804.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 31399 32064 . - . ID=gene-CYJ02_RS08465;Name=CYJ02_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08465;old_locus_tag=CYJ02_08465 NZ_PJUQ01000016.1 Protein Homology CDS 31399 32064 . - 0 ID=cds-WP_014612707.1;Parent=gene-CYJ02_RS08465;Dbxref=GenBank:WP_014612707.1;Name=WP_014612707.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723717.1;locus_tag=CYJ02_RS08465;product=NAD(P)-binding oxidoreductase;protein_id=WP_014612707.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 32089 32769 . - . ID=gene-CYJ02_RS08470;Name=CYJ02_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08470;old_locus_tag=CYJ02_08470 NZ_PJUQ01000016.1 Protein Homology CDS 32089 32769 . - 0 ID=cds-WP_101431584.1;Parent=gene-CYJ02_RS08470;Dbxref=GenBank:WP_101431584.1;Name=WP_101431584.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612706.1;locus_tag=CYJ02_RS08470;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_101431584.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 32847 33197 . + . ID=gene-CYJ02_RS08475;Name=CYJ02_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08475;old_locus_tag=CYJ02_08475 NZ_PJUQ01000016.1 Protein Homology CDS 32847 33197 . + 0 ID=cds-WP_065353924.1;Parent=gene-CYJ02_RS08475;Dbxref=GenBank:WP_065353924.1;Name=WP_065353924.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729806.1;locus_tag=CYJ02_RS08475;product=helix-turn-helix domain-containing protein;protein_id=WP_065353924.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 33284 34708 . + . ID=gene-CYJ02_RS08480;Name=CYJ02_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08480;old_locus_tag=CYJ02_08480 NZ_PJUQ01000016.1 Protein Homology CDS 33284 34708 . + 0 ID=cds-WP_100004515.1;Parent=gene-CYJ02_RS08480;Dbxref=GenBank:WP_100004515.1;Name=WP_100004515.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612704.1;locus_tag=CYJ02_RS08480;product=cryptochrome/photolyase family protein;protein_id=WP_100004515.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 35030 37261 . - . ID=gene-CYJ02_RS08485;Name=CYJ02_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08485;old_locus_tag=CYJ02_08485 NZ_PJUQ01000016.1 Protein Homology CDS 35030 37261 . - 0 ID=cds-WP_101431593.1;Parent=gene-CYJ02_RS08485;Dbxref=GenBank:WP_101431593.1;Name=WP_101431593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ02_RS08485;product=Ig-like domain-containing protein;protein_id=WP_101431593.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 38116 39558 . - . ID=gene-CYJ02_RS08490;Name=CYJ02_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08490;old_locus_tag=CYJ02_08490 NZ_PJUQ01000016.1 Protein Homology CDS 38116 39558 . - 0 ID=cds-WP_014612701.1;Parent=gene-CYJ02_RS08490;Dbxref=GenBank:WP_014612701.1;Name=WP_014612701.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165696.1;locus_tag=CYJ02_RS08490;product=6-phospho-beta-glucosidase;protein_id=WP_014612701.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 39883 40587 . + . ID=gene-CYJ02_RS08495;Name=CYJ02_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08495;old_locus_tag=CYJ02_08495 NZ_PJUQ01000016.1 Protein Homology CDS 39883 40587 . + 0 ID=cds-WP_241901338.1;Parent=gene-CYJ02_RS08495;Dbxref=GenBank:WP_241901338.1;Name=WP_241901338.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=CYJ02_RS08495;product=GntR family transcriptional regulator;protein_id=WP_241901338.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 41107 41679 . - . ID=gene-CYJ02_RS08500;Name=CYJ02_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08500;old_locus_tag=CYJ02_08500 NZ_PJUQ01000016.1 Protein Homology CDS 41107 41679 . - 0 ID=cds-WP_101431586.1;Parent=gene-CYJ02_RS08500;Dbxref=GenBank:WP_101431586.1;Name=WP_101431586.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612695.1;locus_tag=CYJ02_RS08500;product=helix-turn-helix domain-containing protein;protein_id=WP_101431586.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 41862 43910 . - . ID=gene-CYJ02_RS08505;Name=CYJ02_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08505;old_locus_tag=CYJ02_08505 NZ_PJUQ01000016.1 Protein Homology CDS 41862 43910 . - 0 ID=cds-WP_198586538.1;Parent=gene-CYJ02_RS08505;Dbxref=GenBank:WP_198586538.1;Name=WP_198586538.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=CYJ02_RS08505;product=heavy metal translocating P-type ATPase;protein_id=WP_198586538.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 44133 45455 . - . ID=gene-CYJ02_RS08510;Name=CYJ02_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08510;old_locus_tag=CYJ02_08510 NZ_PJUQ01000016.1 Protein Homology CDS 44133 45455 . - 0 ID=cds-WP_065520735.1;Parent=gene-CYJ02_RS08510;Dbxref=GenBank:WP_065520735.1;Name=WP_065520735.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612693.1;locus_tag=CYJ02_RS08510;product=APC family permease;protein_id=WP_065520735.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 45488 46528 . - . ID=gene-CYJ02_RS08515;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08515;old_locus_tag=CYJ02_08515 NZ_PJUQ01000016.1 Protein Homology CDS 45488 46528 . - 0 ID=cds-WP_014612692.1;Parent=gene-CYJ02_RS08515;Dbxref=GenBank:WP_014612692.1;Name=WP_014612692.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210816.1;locus_tag=CYJ02_RS08515;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_014612692.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 46565 47680 . - . ID=gene-CYJ02_RS08520;Name=CYJ02_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08520;old_locus_tag=CYJ02_08520 NZ_PJUQ01000016.1 Protein Homology CDS 46565 47680 . - 0 ID=cds-WP_101431587.1;Parent=gene-CYJ02_RS08520;Dbxref=GenBank:WP_101431587.1;Name=WP_101431587.1;Ontology_term=GO:0042853,GO:0000286,GO:0051287;gbkey=CDS;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA,NAD binding|0051287||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166648.1;locus_tag=CYJ02_RS08520;product=alanine dehydrogenase;protein_id=WP_101431587.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 48148 48333 . - . ID=gene-CYJ02_RS08525;Name=CYJ02_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08525;old_locus_tag=CYJ02_08525 NZ_PJUQ01000016.1 Protein Homology CDS 48148 48333 . - 0 ID=cds-WP_014612690.1;Parent=gene-CYJ02_RS08525;Dbxref=GenBank:WP_014612690.1;Name=WP_014612690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612690.1;locus_tag=CYJ02_RS08525;product=hypothetical protein;protein_id=WP_014612690.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 48347 48790 . - . ID=gene-CYJ02_RS08530;Name=CYJ02_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08530;old_locus_tag=CYJ02_08530 NZ_PJUQ01000016.1 GeneMarkS-2+ CDS 48347 48790 . - 0 ID=cds-WP_101431588.1;Parent=gene-CYJ02_RS08530;Dbxref=GenBank:WP_101431588.1;Name=WP_101431588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS08530;product=hypothetical protein;protein_id=WP_101431588.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 49122 49514 . - . ID=gene-CYJ02_RS08535;Name=CYJ02_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08535;old_locus_tag=CYJ02_08535 NZ_PJUQ01000016.1 Protein Homology CDS 49122 49514 . - 0 ID=cds-WP_101431589.1;Parent=gene-CYJ02_RS08535;Dbxref=GenBank:WP_101431589.1;Name=WP_101431589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019413799.1;locus_tag=CYJ02_RS08535;product=VOC family protein;protein_id=WP_101431589.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 49792 50160 . - . ID=gene-CYJ02_RS08540;Name=CYJ02_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08540;old_locus_tag=CYJ02_08540 NZ_PJUQ01000016.1 GeneMarkS-2+ CDS 49792 50160 . - 0 ID=cds-WP_240790504.1;Parent=gene-CYJ02_RS08540;Dbxref=GenBank:WP_240790504.1;Name=WP_240790504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS08540;product=hypothetical protein;protein_id=WP_240790504.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 50295 51533 . - . ID=gene-CYJ02_RS08545;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=CYJ02_RS08545;old_locus_tag=CYJ02_08545 NZ_PJUQ01000016.1 Protein Homology CDS 50295 51533 . - 0 ID=cds-WP_101431590.1;Parent=gene-CYJ02_RS08545;Dbxref=GenBank:WP_101431590.1;Name=WP_101431590.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489500.1;locus_tag=CYJ02_RS08545;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_101431590.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 51636 53105 . - . ID=gene-CYJ02_RS08550;Name=CYJ02_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08550;old_locus_tag=CYJ02_08550 NZ_PJUQ01000016.1 Protein Homology CDS 51636 53105 . - 0 ID=cds-WP_101431591.1;Parent=gene-CYJ02_RS08550;Dbxref=GenBank:WP_101431591.1;Name=WP_101431591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000446878.1;locus_tag=CYJ02_RS08550;product=Sau3AI family type II restriction endonuclease;protein_id=WP_101431591.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq gene 53180 53659 . - . ID=gene-CYJ02_RS08555;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CYJ02_RS08555;old_locus_tag=CYJ02_08555 NZ_PJUQ01000016.1 Protein Homology CDS 53180 53659 . - 0 ID=cds-WP_101431592.1;Parent=gene-CYJ02_RS08555;Dbxref=GenBank:WP_101431592.1;Name=WP_101431592.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CYJ02_RS08555;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_101431592.1;transl_table=11 NZ_PJUQ01000016.1 RefSeq pseudogene 54011 54175 . - . ID=gene-CYJ02_RS12965;Name=CYJ02_RS12965;end_range=54175,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12965;old_locus_tag=CYJ02_08560;partial=true;pseudo=true NZ_PJUQ01000016.1 Protein Homology CDS 54011 54175 . - 0 ID=cds-CYJ02_RS12965;Parent=gene-CYJ02_RS12965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12965;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region NZ_PJUQ01000017.1 1 69476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000017.1 RefSeq region 1 69476 . + . ID=NZ_PJUQ01000017.1:1..69476;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000017.1 RefSeq gene 202 393 . - . ID=gene-CYJ02_RS12395;Name=CYJ02_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12395;old_locus_tag=CYJ02_08565 NZ_PJUQ01000017.1 GeneMarkS-2+ CDS 202 393 . - 0 ID=cds-WP_101431595.1;Parent=gene-CYJ02_RS12395;Dbxref=GenBank:WP_101431595.1;Name=WP_101431595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12395;product=hypothetical protein;protein_id=WP_101431595.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 359 514 . - . ID=gene-CYJ02_RS12400;Name=CYJ02_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12400 NZ_PJUQ01000017.1 GeneMarkS-2+ CDS 359 514 . - 0 ID=cds-WP_157929434.1;Parent=gene-CYJ02_RS12400;Dbxref=GenBank:WP_157929434.1;Name=WP_157929434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12400;product=hypothetical protein;protein_id=WP_157929434.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq pseudogene 915 2051 . - . ID=gene-CYJ02_RS08575;Name=CYJ02_RS08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS08575;old_locus_tag=CYJ02_08575;pseudo=true NZ_PJUQ01000017.1 Protein Homology CDS 915 2051 . - 0 ID=cds-CYJ02_RS08575;Parent=gene-CYJ02_RS08575;Note=frameshifted%3B internal stop;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912422.1;locus_tag=CYJ02_RS08575;product=thiolase family protein;pseudo=true;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 2743 2834 . - . ID=gene-CYJ02_RS12405;Name=CYJ02_RS12405;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS12405 NZ_PJUQ01000017.1 tRNAscan-SE tRNA 2743 2834 . - . ID=rna-CYJ02_RS12405;Parent=gene-CYJ02_RS12405;anticodon=(pos:complement(2794..2796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12405;product=tRNA-Lys NZ_PJUQ01000017.1 tRNAscan-SE exon 2743 2834 . - . ID=exon-CYJ02_RS12405-1;Parent=rna-CYJ02_RS12405;anticodon=(pos:complement(2794..2796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12405;product=tRNA-Lys NZ_PJUQ01000017.1 RefSeq pseudogene 3163 4398 . + . ID=gene-CYJ02_RS08580;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=CYJ02_RS08580;old_locus_tag=CYJ02_08580;pseudo=true NZ_PJUQ01000017.1 Protein Homology CDS 3163 4398 . + 0 ID=cds-CYJ02_RS08580;Parent=gene-CYJ02_RS08580;Note=internal stop;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970384.1;locus_tag=CYJ02_RS08580;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 4527 5075 . - . ID=gene-CYJ02_RS12790;Name=CYJ02_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12790;old_locus_tag=CYJ02_08585 NZ_PJUQ01000017.1 Protein Homology CDS 4527 5075 . - 0 ID=cds-WP_240621186.1;Parent=gene-CYJ02_RS12790;Dbxref=GenBank:WP_240621186.1;Name=WP_240621186.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=CYJ02_RS12790;product=tyrosine-type recombinase/integrase;protein_id=WP_240621186.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 5879 6058 . + . ID=gene-CYJ02_RS08590;Name=CYJ02_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08590;old_locus_tag=CYJ02_08590 NZ_PJUQ01000017.1 Protein Homology CDS 5879 6058 . + 0 ID=cds-WP_014614017.1;Parent=gene-CYJ02_RS08590;Dbxref=GenBank:WP_014614017.1;Name=WP_014614017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614017.1;locus_tag=CYJ02_RS08590;product=DUF1381 domain-containing protein;protein_id=WP_014614017.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 6042 6350 . - . ID=gene-CYJ02_RS08595;Name=CYJ02_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08595;old_locus_tag=CYJ02_08595 NZ_PJUQ01000017.1 Protein Homology CDS 6042 6350 . - 0 ID=cds-WP_037543121.1;Parent=gene-CYJ02_RS08595;Dbxref=GenBank:WP_037543121.1;Name=WP_037543121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500109.1;locus_tag=CYJ02_RS08595;product=DUF4870 domain-containing protein;protein_id=WP_037543121.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 7208 7954 . + . ID=gene-CYJ02_RS08600;Name=CYJ02_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08600;old_locus_tag=CYJ02_08600 NZ_PJUQ01000017.1 Protein Homology CDS 7208 7954 . + 0 ID=cds-WP_070407765.1;Parent=gene-CYJ02_RS08600;Dbxref=GenBank:WP_070407765.1;Name=WP_070407765.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614014.1;locus_tag=CYJ02_RS08600;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_070407765.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 7985 9277 . + . ID=gene-CYJ02_RS08605;Name=CYJ02_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08605;old_locus_tag=CYJ02_08605 NZ_PJUQ01000017.1 Protein Homology CDS 7985 9277 . + 0 ID=cds-WP_101431596.1;Parent=gene-CYJ02_RS08605;Dbxref=GenBank:WP_101431596.1;Name=WP_101431596.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614013.1;locus_tag=CYJ02_RS08605;product=MFS transporter;protein_id=WP_101431596.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 9438 9680 . + . ID=gene-CYJ02_RS08610;Name=CYJ02_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08610;old_locus_tag=CYJ02_08610 NZ_PJUQ01000017.1 Protein Homology CDS 9438 9680 . + 0 ID=cds-WP_015729073.1;Parent=gene-CYJ02_RS08610;Dbxref=GenBank:WP_015729073.1;Name=WP_015729073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729073.1;locus_tag=CYJ02_RS08610;product=hypothetical protein;protein_id=WP_015729073.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 9759 10499 . + . ID=gene-CYJ02_RS08615;Name=CYJ02_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08615;old_locus_tag=CYJ02_08615 NZ_PJUQ01000017.1 Protein Homology CDS 9759 10499 . + 0 ID=cds-WP_101431597.1;Parent=gene-CYJ02_RS08615;Dbxref=GenBank:WP_101431597.1;Name=WP_101431597.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729074.1;locus_tag=CYJ02_RS08615;product=HAD family hydrolase;protein_id=WP_101431597.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 10791 11432 . - . ID=gene-CYJ02_RS08620;Name=CYJ02_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08620;old_locus_tag=CYJ02_08620 NZ_PJUQ01000017.1 Protein Homology CDS 10791 11432 . - 0 ID=cds-WP_101431598.1;Parent=gene-CYJ02_RS08620;Dbxref=GenBank:WP_101431598.1;Name=WP_101431598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614009.1;locus_tag=CYJ02_RS08620;product=thermonuclease family protein;protein_id=WP_101431598.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 12092 12289 . - . ID=gene-CYJ02_RS08625;Name=CYJ02_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08625;old_locus_tag=CYJ02_08625 NZ_PJUQ01000017.1 Protein Homology CDS 12092 12289 . - 0 ID=cds-WP_014614007.1;Parent=gene-CYJ02_RS08625;Dbxref=GenBank:WP_014614007.1;Name=WP_014614007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=CYJ02_RS08625;product=hypothetical protein;protein_id=WP_014614007.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 12428 12934 . + . ID=gene-CYJ02_RS08630;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=CYJ02_RS08630;old_locus_tag=CYJ02_08630 NZ_PJUQ01000017.1 Protein Homology CDS 12428 12934 . + 0 ID=cds-WP_037543104.1;Parent=gene-CYJ02_RS08630;Dbxref=GenBank:WP_037543104.1;Name=WP_037543104.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=CYJ02_RS08630;product=thermonuclease NucI;protein_id=WP_037543104.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 12998 13867 . - . ID=gene-CYJ02_RS08635;Name=CYJ02_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08635;old_locus_tag=CYJ02_08635 NZ_PJUQ01000017.1 Protein Homology CDS 12998 13867 . - 0 ID=cds-WP_101431599.1;Parent=gene-CYJ02_RS08635;Dbxref=GenBank:WP_101431599.1;Name=WP_101431599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614005.1;locus_tag=CYJ02_RS08635;product=hypothetical protein;protein_id=WP_101431599.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 14296 14658 . - . ID=gene-CYJ02_RS08640;Name=CYJ02_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08640;old_locus_tag=CYJ02_08640 NZ_PJUQ01000017.1 Protein Homology CDS 14296 14658 . - 0 ID=cds-WP_014614004.1;Parent=gene-CYJ02_RS08640;Dbxref=GenBank:WP_014614004.1;Name=WP_014614004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167762.1;locus_tag=CYJ02_RS08640;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014614004.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 15173 15760 . + . ID=gene-CYJ02_RS08645;Name=CYJ02_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08645;old_locus_tag=CYJ02_08645 NZ_PJUQ01000017.1 Protein Homology CDS 15173 15760 . + 0 ID=cds-WP_015729077.1;Parent=gene-CYJ02_RS08645;Dbxref=GenBank:WP_015729077.1;Name=WP_015729077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165399.1;locus_tag=CYJ02_RS08645;product=hypothetical protein;protein_id=WP_015729077.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 15804 17156 . - . ID=gene-CYJ02_RS08650;Name=CYJ02_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08650;old_locus_tag=CYJ02_08650 NZ_PJUQ01000017.1 Protein Homology CDS 15804 17156 . - 0 ID=cds-WP_015729078.1;Parent=gene-CYJ02_RS08650;Dbxref=GenBank:WP_015729078.1;Name=WP_015729078.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729078.1;locus_tag=CYJ02_RS08650;product=aspartate kinase;protein_id=WP_015729078.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 17348 18631 . + . ID=gene-CYJ02_RS08655;Name=CYJ02_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08655;old_locus_tag=CYJ02_08655 NZ_PJUQ01000017.1 Protein Homology CDS 17348 18631 . + 0 ID=cds-WP_014614000.1;Parent=gene-CYJ02_RS08655;Dbxref=GenBank:WP_014614000.1;Name=WP_014614000.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457511.1;locus_tag=CYJ02_RS08655;product=homoserine dehydrogenase;protein_id=WP_014614000.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 18637 19701 . + . ID=gene-CYJ02_RS08660;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08660;old_locus_tag=CYJ02_08660 NZ_PJUQ01000017.1 Protein Homology CDS 18637 19701 . + 0 ID=cds-WP_014613999.1;Parent=gene-CYJ02_RS08660;Dbxref=GenBank:WP_014613999.1;Name=WP_014613999.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=CYJ02_RS08660;product=threonine synthase;protein_id=WP_014613999.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 19701 20618 . + . ID=gene-CYJ02_RS08665;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08665;old_locus_tag=CYJ02_08665 NZ_PJUQ01000017.1 Protein Homology CDS 19701 20618 . + 0 ID=cds-WP_172635631.1;Parent=gene-CYJ02_RS08665;Dbxref=GenBank:WP_172635631.1;Name=WP_172635631.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511052.1;locus_tag=CYJ02_RS08665;product=homoserine kinase;protein_id=WP_172635631.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 20804 21607 . + . ID=gene-CYJ02_RS08670;Name=CYJ02_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08670;old_locus_tag=CYJ02_08670 NZ_PJUQ01000017.1 Protein Homology CDS 20804 21607 . + 0 ID=cds-WP_014613997.1;Parent=gene-CYJ02_RS08670;Dbxref=GenBank:WP_014613997.1;Name=WP_014613997.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=CYJ02_RS08670;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014613997.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 21761 22075 . - . ID=gene-CYJ02_RS08675;Name=CYJ02_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08675;old_locus_tag=CYJ02_08675 NZ_PJUQ01000017.1 Protein Homology CDS 21761 22075 . - 0 ID=cds-WP_070407762.1;Parent=gene-CYJ02_RS08675;Dbxref=GenBank:WP_070407762.1;Name=WP_070407762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=CYJ02_RS08675;product=hypothetical protein;protein_id=WP_070407762.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 22249 23700 . - . ID=gene-CYJ02_RS08680;Name=CYJ02_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08680;old_locus_tag=CYJ02_08680 NZ_PJUQ01000017.1 Protein Homology CDS 22249 23700 . - 0 ID=cds-WP_014613995.1;Parent=gene-CYJ02_RS08680;Dbxref=GenBank:WP_014613995.1;Name=WP_014613995.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167754.1;locus_tag=CYJ02_RS08680;product=amino acid permease;protein_id=WP_014613995.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 24054 24203 . - . ID=gene-CYJ02_RS08685;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08685;old_locus_tag=CYJ02_08685 NZ_PJUQ01000017.1 Protein Homology CDS 24054 24203 . - 0 ID=cds-WP_014613994.1;Parent=gene-CYJ02_RS08685;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ02_RS08685;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 24375 24644 . + . ID=gene-CYJ02_RS08690;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CYJ02_RS08690;old_locus_tag=CYJ02_08690 NZ_PJUQ01000017.1 Protein Homology CDS 24375 24644 . + 0 ID=cds-WP_014613993.1;Parent=gene-CYJ02_RS08690;Dbxref=GenBank:WP_014613993.1;Name=WP_014613993.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CYJ02_RS08690;product=30S ribosomal protein S14;protein_id=WP_014613993.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 24725 25702 . + . ID=gene-CYJ02_RS08695;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08695;old_locus_tag=CYJ02_08695 NZ_PJUQ01000017.1 Protein Homology CDS 24725 25702 . + 0 ID=cds-WP_101431600.1;Parent=gene-CYJ02_RS08695;Dbxref=GenBank:WP_101431600.1;Name=WP_101431600.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=CYJ02_RS08695;product=GMP reductase;protein_id=WP_101431600.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 25708 26724 . + . ID=gene-CYJ02_RS08700;Name=CYJ02_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08700;old_locus_tag=CYJ02_08700 NZ_PJUQ01000017.1 Protein Homology CDS 25708 26724 . + 0 ID=cds-WP_181137790.1;Parent=gene-CYJ02_RS08700;Dbxref=GenBank:WP_181137790.1;Name=WP_181137790.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275860.1;locus_tag=CYJ02_RS08700;product=CAP domain-containing protein;protein_id=WP_181137790.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 26937 27560 . - . ID=gene-CYJ02_RS08705;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08705;old_locus_tag=CYJ02_08705 NZ_PJUQ01000017.1 Protein Homology CDS 26937 27560 . - 0 ID=cds-WP_014613990.1;Parent=gene-CYJ02_RS08705;Dbxref=GenBank:WP_014613990.1;Name=WP_014613990.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CYJ02_RS08705;product=transcriptional repressor LexA;protein_id=WP_014613990.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 27705 27938 . + . ID=gene-CYJ02_RS08710;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08710;old_locus_tag=CYJ02_08710 NZ_PJUQ01000017.1 Protein Homology CDS 27705 27938 . + 0 ID=cds-WP_014613989.1;Parent=gene-CYJ02_RS08710;Dbxref=GenBank:WP_014613989.1;Name=WP_014613989.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=CYJ02_RS08710;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_014613989.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 28205 28441 . + . ID=gene-CYJ02_RS08715;Name=CYJ02_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08715;old_locus_tag=CYJ02_08715 NZ_PJUQ01000017.1 Protein Homology CDS 28205 28441 . + 0 ID=cds-WP_014613988.1;Parent=gene-CYJ02_RS08715;Dbxref=GenBank:WP_014613988.1;Name=WP_014613988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613988.1;locus_tag=CYJ02_RS08715;product=DUF896 domain-containing protein;protein_id=WP_014613988.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 28546 30531 . + . ID=gene-CYJ02_RS08720;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CYJ02_RS08720;old_locus_tag=CYJ02_08720 NZ_PJUQ01000017.1 Protein Homology CDS 28546 30531 . + 0 ID=cds-WP_014613987.1;Parent=gene-CYJ02_RS08720;Dbxref=GenBank:WP_014613987.1;Name=WP_014613987.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613987.1;locus_tag=CYJ02_RS08720;product=transketolase;protein_id=WP_014613987.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 30689 30916 . + . ID=gene-CYJ02_RS08725;Name=CYJ02_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08725;old_locus_tag=CYJ02_08725 NZ_PJUQ01000017.1 Protein Homology CDS 30689 30916 . + 0 ID=cds-WP_014613986.1;Parent=gene-CYJ02_RS08725;Dbxref=GenBank:WP_014613986.1;Name=WP_014613986.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=CYJ02_RS08725;product=YneF family protein;protein_id=WP_014613986.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 31164 31631 . + . ID=gene-CYJ02_RS08730;Name=CYJ02_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08730;old_locus_tag=CYJ02_08730 NZ_PJUQ01000017.1 Protein Homology CDS 31164 31631 . + 0 ID=cds-WP_014613985.1;Parent=gene-CYJ02_RS08730;Dbxref=GenBank:WP_014613985.1;Name=WP_014613985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613985.1;locus_tag=CYJ02_RS08730;product=CcdC family protein;protein_id=WP_014613985.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 31757 32911 . + . ID=gene-CYJ02_RS08735;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CYJ02_RS08735;old_locus_tag=CYJ02_08735 NZ_PJUQ01000017.1 Protein Homology CDS 31757 32911 . + 0 ID=cds-WP_101431602.1;Parent=gene-CYJ02_RS08735;Dbxref=GenBank:WP_101431602.1;Name=WP_101431602.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=CYJ02_RS08735;product=exonuclease subunit SbcD;protein_id=WP_101431602.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 32914 35946 . + . ID=gene-CYJ02_RS08740;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08740;old_locus_tag=CYJ02_08740 NZ_PJUQ01000017.1 Protein Homology CDS 32914 35946 . + 0 ID=cds-WP_101431603.1;Parent=gene-CYJ02_RS08740;Dbxref=GenBank:WP_101431603.1;Name=WP_101431603.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613982.1;locus_tag=CYJ02_RS08740;product=exonuclease subunit SbcC;protein_id=WP_101431603.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 36175 36534 . - . ID=gene-CYJ02_RS08745;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CYJ02_RS08745;old_locus_tag=CYJ02_08745 NZ_PJUQ01000017.1 Protein Homology CDS 36175 36534 . - 0 ID=cds-WP_014613981.1;Parent=gene-CYJ02_RS08745;Dbxref=GenBank:WP_014613981.1;Name=WP_014613981.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166560.1;locus_tag=CYJ02_RS08745;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_014613981.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 36773 38407 . + . ID=gene-CYJ02_RS08750;Name=CYJ02_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08750;old_locus_tag=CYJ02_08750 NZ_PJUQ01000017.1 Protein Homology CDS 36773 38407 . + 0 ID=cds-WP_014613980.1;Parent=gene-CYJ02_RS08750;Dbxref=GenBank:WP_014613980.1;Name=WP_014613980.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=CYJ02_RS08750;product=BCCT family transporter;protein_id=WP_014613980.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 38706 41411 . + . ID=gene-CYJ02_RS08755;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08755;old_locus_tag=CYJ02_08755 NZ_PJUQ01000017.1 Protein Homology CDS 38706 41411 . + 0 ID=cds-WP_014613979.1;Parent=gene-CYJ02_RS08755;Dbxref=GenBank:WP_014613979.1;Name=WP_014613979.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=CYJ02_RS08755;product=aconitate hydratase AcnA;protein_id=WP_014613979.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 41776 42240 . + . ID=gene-CYJ02_RS08760;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CYJ02_RS08760;old_locus_tag=CYJ02_08760 NZ_PJUQ01000017.1 Protein Homology CDS 41776 42240 . + 0 ID=cds-WP_014613978.1;Parent=gene-CYJ02_RS08760;Dbxref=GenBank:WP_014613978.1;Name=WP_014613978.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613978.1;locus_tag=CYJ02_RS08760;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_014613978.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 42369 42674 . - . ID=gene-CYJ02_RS08765;Name=CYJ02_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08765;old_locus_tag=CYJ02_08765 NZ_PJUQ01000017.1 Protein Homology CDS 42369 42674 . - 0 ID=cds-WP_015729090.1;Parent=gene-CYJ02_RS08765;Dbxref=GenBank:WP_015729090.1;Name=WP_015729090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613977.1;locus_tag=CYJ02_RS08765;product=HesB/YadR/YfhF family protein;protein_id=WP_015729090.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 42759 43340 . - . ID=gene-CYJ02_RS08770;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CYJ02_RS08770;old_locus_tag=CYJ02_08770 NZ_PJUQ01000017.1 Protein Homology CDS 42759 43340 . - 0 ID=cds-WP_014613976.1;Parent=gene-CYJ02_RS08770;Dbxref=GenBank:WP_014613976.1;Name=WP_014613976.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167738.1;locus_tag=CYJ02_RS08770;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_014613976.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 43631 45628 . + . ID=gene-CYJ02_RS08775;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CYJ02_RS08775;old_locus_tag=CYJ02_08775 NZ_PJUQ01000017.1 Protein Homology CDS 43631 45628 . + 0 ID=cds-WP_101431604.1;Parent=gene-CYJ02_RS08775;Dbxref=GenBank:WP_101431604.1;Name=WP_101431604.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=CYJ02_RS08775;product=DNA topoisomerase IV subunit B;protein_id=WP_101431604.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 45628 48039 . + . ID=gene-CYJ02_RS08780;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CYJ02_RS08780;old_locus_tag=CYJ02_08780 NZ_PJUQ01000017.1 Protein Homology CDS 45628 48039 . + 0 ID=cds-WP_015729092.1;Parent=gene-CYJ02_RS08780;Dbxref=GenBank:WP_015729092.1;Name=WP_015729092.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=CYJ02_RS08780;product=DNA topoisomerase IV subunit A;protein_id=WP_015729092.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 48142 49605 . + . ID=gene-CYJ02_RS08785;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=CYJ02_RS08785;old_locus_tag=CYJ02_08785 NZ_PJUQ01000017.1 Protein Homology CDS 48142 49605 . + 0 ID=cds-WP_014613973.1;Parent=gene-CYJ02_RS08785;Dbxref=GenBank:WP_014613973.1;Name=WP_014613973.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166553.1;locus_tag=CYJ02_RS08785;product=glutamine transporter AlsT;protein_id=WP_014613973.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 49801 50652 . + . ID=gene-CYJ02_RS08790;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=CYJ02_RS08790;old_locus_tag=CYJ02_08790 NZ_PJUQ01000017.1 Protein Homology CDS 49801 50652 . + 0 ID=cds-WP_101431605.1;Parent=gene-CYJ02_RS08790;Dbxref=GenBank:WP_101431605.1;Name=WP_101431605.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=CYJ02_RS08790;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_101431605.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 50763 52802 . + . ID=gene-CYJ02_RS08795;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08795;old_locus_tag=CYJ02_08795 NZ_PJUQ01000017.1 Protein Homology CDS 50763 52802 . + 0 ID=cds-WP_037543085.1;Parent=gene-CYJ02_RS08795;Dbxref=GenBank:WP_037543085.1;Name=WP_037543085.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166551.1;locus_tag=CYJ02_RS08795;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_037543085.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 53075 54277 . + . ID=gene-CYJ02_RS08800;Name=CYJ02_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08800;old_locus_tag=CYJ02_08800 NZ_PJUQ01000017.1 Protein Homology CDS 53075 54277 . + 0 ID=cds-WP_014613970.1;Parent=gene-CYJ02_RS08800;Dbxref=GenBank:WP_014613970.1;Name=WP_014613970.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729093.1;locus_tag=CYJ02_RS08800;product=AI-2E family transporter;protein_id=WP_014613970.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 54373 56892 . + . ID=gene-CYJ02_RS08805;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=CYJ02_RS08805;old_locus_tag=CYJ02_08805 NZ_PJUQ01000017.1 Protein Homology CDS 54373 56892 . + 0 ID=cds-WP_014613969.1;Parent=gene-CYJ02_RS08805;Dbxref=GenBank:WP_014613969.1;Name=WP_014613969.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729094.1;locus_tag=CYJ02_RS08805;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_014613969.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 57139 57657 . - . ID=gene-CYJ02_RS08810;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08810;old_locus_tag=CYJ02_08810 NZ_PJUQ01000017.1 Protein Homology CDS 57139 57657 . - 0 ID=cds-WP_014613968.1;Parent=gene-CYJ02_RS08810;Dbxref=GenBank:WP_014613968.1;Name=WP_014613968.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613968.1;locus_tag=CYJ02_RS08810;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014613968.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 57796 58767 . + . ID=gene-CYJ02_RS08815;Name=CYJ02_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08815;old_locus_tag=CYJ02_08815 NZ_PJUQ01000017.1 Protein Homology CDS 57796 58767 . + 0 ID=cds-WP_014613967.1;Parent=gene-CYJ02_RS08815;Dbxref=GenBank:WP_014613967.1;Name=WP_014613967.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219592.1;locus_tag=CYJ02_RS08815;product=LCP family protein;protein_id=WP_014613967.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 58823 59008 . - . ID=gene-CYJ02_RS08820;Name=CYJ02_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08820;old_locus_tag=CYJ02_08820 NZ_PJUQ01000017.1 Protein Homology CDS 58823 59008 . - 0 ID=cds-WP_014613966.1;Parent=gene-CYJ02_RS08820;Dbxref=GenBank:WP_014613966.1;Name=WP_014613966.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CYJ02_RS08820;product=2-hydroxymuconate tautomerase;protein_id=WP_014613966.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 59120 59527 . + . ID=gene-CYJ02_RS08825;Name=CYJ02_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08825;old_locus_tag=CYJ02_08825 NZ_PJUQ01000017.1 Protein Homology CDS 59120 59527 . + 0 ID=cds-WP_014613965.1;Parent=gene-CYJ02_RS08825;Dbxref=GenBank:WP_014613965.1;Name=WP_014613965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=CYJ02_RS08825;product=sporulation protein;protein_id=WP_014613965.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 59680 60942 . + . ID=gene-CYJ02_RS08830;Name=CYJ02_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08830;old_locus_tag=CYJ02_08830 NZ_PJUQ01000017.1 Protein Homology CDS 59680 60942 . + 0 ID=cds-WP_014613964.1;Parent=gene-CYJ02_RS08830;Dbxref=GenBank:WP_014613964.1;Name=WP_014613964.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=CYJ02_RS08830;product=Y-family DNA polymerase;protein_id=WP_014613964.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 61018 62109 . - . ID=gene-CYJ02_RS08835;Name=CYJ02_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08835;old_locus_tag=CYJ02_08835 NZ_PJUQ01000017.1 Protein Homology CDS 61018 62109 . - 0 ID=cds-WP_014613963.1;Parent=gene-CYJ02_RS08835;Dbxref=GenBank:WP_014613963.1;Name=WP_014613963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=CYJ02_RS08835;product=prephenate dehydrogenase;protein_id=WP_014613963.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 62252 63286 . + . ID=gene-CYJ02_RS08840;Name=CYJ02_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08840;old_locus_tag=CYJ02_08840 NZ_PJUQ01000017.1 Protein Homology CDS 62252 63286 . + 0 ID=cds-WP_014613962.1;Parent=gene-CYJ02_RS08840;Dbxref=GenBank:WP_014613962.1;Name=WP_014613962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219594.1;locus_tag=CYJ02_RS08840;product=M42 family metallopeptidase;protein_id=WP_014613962.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 63461 64726 . + . ID=gene-CYJ02_RS08845;Name=CYJ02_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08845;old_locus_tag=CYJ02_08845 NZ_PJUQ01000017.1 Protein Homology CDS 63461 64726 . + 0 ID=cds-WP_014613961.1;Parent=gene-CYJ02_RS08845;Dbxref=GenBank:WP_014613961.1;Name=WP_014613961.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613961.1;locus_tag=CYJ02_RS08845;product=aminoacyltransferase;protein_id=WP_014613961.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 64756 66015 . + . ID=gene-CYJ02_RS08850;Name=CYJ02_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08850;old_locus_tag=CYJ02_08850 NZ_PJUQ01000017.1 Protein Homology CDS 64756 66015 . + 0 ID=cds-WP_014613960.1;Parent=gene-CYJ02_RS08850;Dbxref=GenBank:WP_014613960.1;Name=WP_014613960.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ02_RS08850;product=aminoacyltransferase;protein_id=WP_014613960.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 66605 66928 . - . ID=gene-CYJ02_RS08855;Name=CYJ02_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08855;old_locus_tag=CYJ02_08855 NZ_PJUQ01000017.1 Protein Homology CDS 66605 66928 . - 0 ID=cds-WP_014613959.1;Parent=gene-CYJ02_RS08855;Dbxref=GenBank:WP_014613959.1;Name=WP_014613959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613959.1;locus_tag=CYJ02_RS08855;product=hypothetical protein;protein_id=WP_014613959.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 67060 68859 . + . ID=gene-CYJ02_RS08860;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ02_RS08860;old_locus_tag=CYJ02_08860 NZ_PJUQ01000017.1 Protein Homology CDS 67060 68859 . + 0 ID=cds-WP_101431606.1;Parent=gene-CYJ02_RS08860;Dbxref=GenBank:WP_101431606.1;Name=WP_101431606.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613958.1;locus_tag=CYJ02_RS08860;product=oligoendopeptidase F;protein_id=WP_101431606.1;transl_table=11 NZ_PJUQ01000017.1 RefSeq gene 68920 69476 . - . ID=gene-CYJ02_RS08865;Name=CYJ02_RS08865;end_range=69476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08865;old_locus_tag=CYJ02_08865;partial=true NZ_PJUQ01000017.1 Protein Homology CDS 68920 69476 . - 2 ID=cds-WP_133121712.1;Parent=gene-CYJ02_RS08865;Dbxref=GenBank:WP_133121712.1;Name=WP_133121712.1;Ontology_term=GO:0009986;end_range=69476,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ02_RS08865;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_133121712.1;transl_table=11 ##sequence-region NZ_PJUQ01000018.1 1 50850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000018.1 RefSeq region 1 50850 . + . ID=NZ_PJUQ01000018.1:1..50850;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000018.1 RefSeq gene 220 687 . + . ID=gene-CYJ02_RS08870;Name=CYJ02_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08870;old_locus_tag=CYJ02_08870 NZ_PJUQ01000018.1 Protein Homology CDS 220 687 . + 0 ID=cds-WP_063278555.1;Parent=gene-CYJ02_RS08870;Dbxref=GenBank:WP_063278555.1;Name=WP_063278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550254.1;locus_tag=CYJ02_RS08870;product=DUF6978 family protein;protein_id=WP_063278555.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 700 1491 . + . ID=gene-CYJ02_RS08875;Name=CYJ02_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08875;old_locus_tag=CYJ02_08875 NZ_PJUQ01000018.1 Protein Homology CDS 700 1491 . + 0 ID=cds-WP_014614471.1;Parent=gene-CYJ02_RS08875;Dbxref=GenBank:WP_014614471.1;Name=WP_014614471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670134.1;locus_tag=CYJ02_RS08875;product=DUF1828 domain-containing protein;protein_id=WP_014614471.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 1685 2479 . - . ID=gene-CYJ02_RS08880;Name=CYJ02_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08880;old_locus_tag=CYJ02_08880 NZ_PJUQ01000018.1 Protein Homology CDS 1685 2479 . - 0 ID=cds-WP_101431608.1;Parent=gene-CYJ02_RS08880;Dbxref=GenBank:WP_101431608.1;Name=WP_101431608.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614473.1;locus_tag=CYJ02_RS08880;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_101431608.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 2948 3307 . - . ID=gene-CYJ02_RS08885;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CYJ02_RS08885;old_locus_tag=CYJ02_08885 NZ_PJUQ01000018.1 cmsearch tmRNA 2948 3307 . - . ID=rna-CYJ02_RS08885;Parent=gene-CYJ02_RS08885;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS08885;product=transfer-messenger RNA NZ_PJUQ01000018.1 cmsearch exon 2948 3307 . - . ID=exon-CYJ02_RS08885-1;Parent=rna-CYJ02_RS08885;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS08885;product=transfer-messenger RNA NZ_PJUQ01000018.1 RefSeq gene 3381 3845 . - . ID=gene-CYJ02_RS08890;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08890;old_locus_tag=CYJ02_08890 NZ_PJUQ01000018.1 Protein Homology CDS 3381 3845 . - 0 ID=cds-WP_014614474.1;Parent=gene-CYJ02_RS08890;Dbxref=GenBank:WP_014614474.1;Name=WP_014614474.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=CYJ02_RS08890;product=SsrA-binding protein SmpB;protein_id=WP_014614474.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 3861 6218 . - . ID=gene-CYJ02_RS08895;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CYJ02_RS08895;old_locus_tag=CYJ02_08895 NZ_PJUQ01000018.1 Protein Homology CDS 3861 6218 . - 0 ID=cds-WP_101431609.1;Parent=gene-CYJ02_RS08895;Dbxref=GenBank:WP_101431609.1;Name=WP_101431609.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CYJ02_RS08895;product=ribonuclease R;protein_id=WP_101431609.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 6273 7013 . - . ID=gene-CYJ02_RS08900;Name=CYJ02_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08900;old_locus_tag=CYJ02_08900 NZ_PJUQ01000018.1 Protein Homology CDS 6273 7013 . - 0 ID=cds-WP_014614476.1;Parent=gene-CYJ02_RS08900;Dbxref=GenBank:WP_014614476.1;Name=WP_014614476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=CYJ02_RS08900;product=alpha/beta hydrolase;protein_id=WP_014614476.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 7112 7345 . - . ID=gene-CYJ02_RS08905;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CYJ02_RS08905;old_locus_tag=CYJ02_08905 NZ_PJUQ01000018.1 Protein Homology CDS 7112 7345 . - 0 ID=cds-WP_014614477.1;Parent=gene-CYJ02_RS08905;Dbxref=GenBank:WP_014614477.1;Name=WP_014614477.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=CYJ02_RS08905;product=preprotein translocase subunit SecG;protein_id=WP_014614477.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 7414 7881 . - . ID=gene-CYJ02_RS08910;Name=CYJ02_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08910;old_locus_tag=CYJ02_08910 NZ_PJUQ01000018.1 Protein Homology CDS 7414 7881 . - 0 ID=cds-WP_014614478.1;Parent=gene-CYJ02_RS08910;Dbxref=GenBank:WP_014614478.1;Name=WP_014614478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=CYJ02_RS08910;product=hypothetical protein;protein_id=WP_014614478.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 8018 9322 . - . ID=gene-CYJ02_RS08915;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CYJ02_RS08915;old_locus_tag=CYJ02_08915 NZ_PJUQ01000018.1 Protein Homology CDS 8018 9322 . - 0 ID=cds-WP_063284481.1;Parent=gene-CYJ02_RS08915;Dbxref=GenBank:WP_063284481.1;Name=WP_063284481.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CYJ02_RS08915;product=surface-displayed alpha-enolase;protein_id=WP_063284481.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 9450 10967 . - . ID=gene-CYJ02_RS08920;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=CYJ02_RS08920;old_locus_tag=CYJ02_08920 NZ_PJUQ01000018.1 Protein Homology CDS 9450 10967 . - 0 ID=cds-WP_014614480.1;Parent=gene-CYJ02_RS08920;Dbxref=GenBank:WP_014614480.1;Name=WP_014614480.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CYJ02_RS08920;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_014614480.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 10970 11731 . - . ID=gene-CYJ02_RS12795;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CYJ02_RS12795;old_locus_tag=CYJ02_08925 NZ_PJUQ01000018.1 Protein Homology CDS 10970 11731 . - 0 ID=cds-WP_014614481.1;Parent=gene-CYJ02_RS12795;Dbxref=GenBank:WP_014614481.1;Name=WP_014614481.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=CYJ02_RS12795;product=triose-phosphate isomerase;protein_id=WP_014614481.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 11777 12967 . - . ID=gene-CYJ02_RS12800;Name=CYJ02_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12800;old_locus_tag=CYJ02_08930 NZ_PJUQ01000018.1 Protein Homology CDS 11777 12967 . - 0 ID=cds-WP_014614482.1;Parent=gene-CYJ02_RS12800;Dbxref=GenBank:WP_014614482.1;Name=WP_014614482.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614482.1;locus_tag=CYJ02_RS12800;product=phosphoglycerate kinase;protein_id=WP_014614482.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 13099 14106 . - . ID=gene-CYJ02_RS08935;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CYJ02_RS08935;old_locus_tag=CYJ02_08935 NZ_PJUQ01000018.1 Protein Homology CDS 13099 14106 . - 0 ID=cds-WP_063284480.1;Parent=gene-CYJ02_RS08935;Dbxref=GenBank:WP_063284480.1;Name=WP_063284480.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=CYJ02_RS08935;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_063284480.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 14169 15206 . - . ID=gene-CYJ02_RS08940;Name=CYJ02_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08940;old_locus_tag=CYJ02_08940 NZ_PJUQ01000018.1 Protein Homology CDS 14169 15206 . - 0 ID=cds-WP_063284479.1;Parent=gene-CYJ02_RS08940;Dbxref=GenBank:WP_063284479.1;Name=WP_063284479.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614484.1;locus_tag=CYJ02_RS08940;product=sugar-binding transcriptional regulator;protein_id=WP_063284479.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 15504 15734 . + . ID=gene-CYJ02_RS08945;Name=CYJ02_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08945;old_locus_tag=CYJ02_08945 NZ_PJUQ01000018.1 Protein Homology CDS 15504 15734 . + 0 ID=cds-WP_081248047.1;Parent=gene-CYJ02_RS08945;Dbxref=GenBank:WP_081248047.1;Name=WP_081248047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168483.1;locus_tag=CYJ02_RS08945;product=hypothetical protein;protein_id=WP_081248047.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 15833 16498 . - . ID=gene-CYJ02_RS08950;Name=CYJ02_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08950;old_locus_tag=CYJ02_08950 NZ_PJUQ01000018.1 Protein Homology CDS 15833 16498 . - 0 ID=cds-WP_063284478.1;Parent=gene-CYJ02_RS08950;Dbxref=GenBank:WP_063284478.1;Name=WP_063284478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614485.1;locus_tag=CYJ02_RS08950;product=DUF4887 domain-containing protein;protein_id=WP_063284478.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 17309 18211 . + . ID=gene-CYJ02_RS08955;Name=CYJ02_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08955;old_locus_tag=CYJ02_08955 NZ_PJUQ01000018.1 Protein Homology CDS 17309 18211 . + 0 ID=cds-WP_070407547.1;Parent=gene-CYJ02_RS08955;Dbxref=GenBank:WP_070407547.1;Name=WP_070407547.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816312.1;locus_tag=CYJ02_RS08955;product=TIGR01777 family oxidoreductase;protein_id=WP_070407547.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 18814 19311 . - . ID=gene-CYJ02_RS08960;Name=CYJ02_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08960;old_locus_tag=CYJ02_08960 NZ_PJUQ01000018.1 Protein Homology CDS 18814 19311 . - 0 ID=cds-WP_014614488.1;Parent=gene-CYJ02_RS08960;Dbxref=GenBank:WP_014614488.1;Name=WP_014614488.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165690.1;locus_tag=CYJ02_RS08960;product=GNAT family N-acetyltransferase;protein_id=WP_014614488.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 19408 20022 . - . ID=gene-CYJ02_RS08965;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CYJ02_RS08965;old_locus_tag=CYJ02_08965 NZ_PJUQ01000018.1 Protein Homology CDS 19408 20022 . - 0 ID=cds-WP_256726599.1;Parent=gene-CYJ02_RS08965;Dbxref=GenBank:WP_256726599.1;Name=WP_256726599.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614489.1;locus_tag=CYJ02_RS08965;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_256726599.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 20147 20218 . + . ID=gene-CYJ02_RS08970;Name=CYJ02_RS08970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS08970;old_locus_tag=CYJ02_08970 NZ_PJUQ01000018.1 tRNAscan-SE tRNA 20147 20218 . + . ID=rna-CYJ02_RS08970;Parent=gene-CYJ02_RS08970;anticodon=(pos:20180..20182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08970;product=tRNA-Arg NZ_PJUQ01000018.1 tRNAscan-SE exon 20147 20218 . + . ID=exon-CYJ02_RS08970-1;Parent=rna-CYJ02_RS08970;anticodon=(pos:20180..20182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS08970;product=tRNA-Arg NZ_PJUQ01000018.1 RefSeq gene 21127 22071 . - . ID=gene-CYJ02_RS08980;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CYJ02_RS08980;old_locus_tag=CYJ02_08980 NZ_PJUQ01000018.1 Protein Homology CDS 21127 22071 . - 0 ID=cds-WP_014614491.1;Parent=gene-CYJ02_RS08980;Dbxref=GenBank:WP_014614491.1;Name=WP_014614491.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=CYJ02_RS08980;product=DNA-binding protein WhiA;protein_id=WP_014614491.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 22118 23113 . - . ID=gene-CYJ02_RS08985;Name=CYJ02_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS08985;old_locus_tag=CYJ02_08985 NZ_PJUQ01000018.1 Protein Homology CDS 22118 23113 . - 0 ID=cds-WP_015728762.1;Parent=gene-CYJ02_RS08985;Dbxref=GenBank:WP_015728762.1;Name=WP_015728762.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=CYJ02_RS08985;product=gluconeogenesis factor YvcK family protein;protein_id=WP_015728762.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 23115 24023 . - . ID=gene-CYJ02_RS08990;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS08990;old_locus_tag=CYJ02_08990 NZ_PJUQ01000018.1 Protein Homology CDS 23115 24023 . - 0 ID=cds-WP_014614493.1;Parent=gene-CYJ02_RS08990;Dbxref=GenBank:WP_014614493.1;Name=WP_014614493.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219570.1;locus_tag=CYJ02_RS08990;product=RNase adapter RapZ;protein_id=WP_014614493.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 24629 25561 . - . ID=gene-CYJ02_RS08995;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CYJ02_RS08995;old_locus_tag=CYJ02_08995 NZ_PJUQ01000018.1 Protein Homology CDS 24629 25561 . - 0 ID=cds-WP_014614494.1;Parent=gene-CYJ02_RS08995;Dbxref=GenBank:WP_014614494.1;Name=WP_014614494.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614494.1;locus_tag=CYJ02_RS08995;product=thioredoxin-disulfide reductase;protein_id=WP_014614494.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 25624 27063 . - . ID=gene-CYJ02_RS09000;Name=CYJ02_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09000;old_locus_tag=CYJ02_09000 NZ_PJUQ01000018.1 Protein Homology CDS 25624 27063 . - 0 ID=cds-WP_015728761.1;Parent=gene-CYJ02_RS09000;Dbxref=GenBank:WP_015728761.1;Name=WP_015728761.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=CYJ02_RS09000;product=tetratricopeptide repeat protein;protein_id=WP_015728761.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq pseudogene 27098 27493 . - . ID=gene-CYJ02_RS09005;Name=CYJ02_RS09005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS09005;old_locus_tag=CYJ02_09005;partial=true;pseudo=true;start_range=.,27098 NZ_PJUQ01000018.1 Protein Homology CDS 27098 27493 . - 0 ID=cds-CYJ02_RS09005;Parent=gene-CYJ02_RS09005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=CYJ02_RS09005;partial=true;product=acyltransferase;pseudo=true;start_range=.,27098;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 27570 28406 . - . ID=gene-CYJ02_RS09010;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CYJ02_RS09010;old_locus_tag=CYJ02_09010 NZ_PJUQ01000018.1 Protein Homology CDS 27570 28406 . - 0 ID=cds-WP_014614497.1;Parent=gene-CYJ02_RS09010;Dbxref=GenBank:WP_014614497.1;Name=WP_014614497.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168497.1;locus_tag=CYJ02_RS09010;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014614497.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 28406 29347 . - . ID=gene-CYJ02_RS09015;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=CYJ02_RS09015;old_locus_tag=CYJ02_09015 NZ_PJUQ01000018.1 Protein Homology CDS 28406 29347 . - 0 ID=cds-WP_063278549.1;Parent=gene-CYJ02_RS09015;Dbxref=GenBank:WP_063278549.1;Name=WP_063278549.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614498.1;locus_tag=CYJ02_RS09015;product=HPr(Ser) kinase/phosphatase;protein_id=WP_063278549.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 29857 30207 . - . ID=gene-CYJ02_RS09020;Name=CYJ02_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09020;old_locus_tag=CYJ02_09020 NZ_PJUQ01000018.1 Protein Homology CDS 29857 30207 . - 0 ID=cds-WP_014614499.1;Parent=gene-CYJ02_RS09020;Dbxref=GenBank:WP_014614499.1;Name=WP_014614499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166115.1;locus_tag=CYJ02_RS09020;product=SHOCT-like domain-containing protein;protein_id=WP_014614499.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 30211 33054 . - . ID=gene-CYJ02_RS09025;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09025;old_locus_tag=CYJ02_09025 NZ_PJUQ01000018.1 Protein Homology CDS 30211 33054 . - 0 ID=cds-WP_014614500.1;Parent=gene-CYJ02_RS09025;Dbxref=GenBank:WP_014614500.1;Name=WP_014614500.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168500.1;locus_tag=CYJ02_RS09025;product=excinuclease ABC subunit UvrA;protein_id=WP_014614500.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 33060 35042 . - . ID=gene-CYJ02_RS09030;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09030;old_locus_tag=CYJ02_09030 NZ_PJUQ01000018.1 Protein Homology CDS 33060 35042 . - 0 ID=cds-WP_014614501.1;Parent=gene-CYJ02_RS09030;Dbxref=GenBank:WP_014614501.1;Name=WP_014614501.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=CYJ02_RS09030;product=excinuclease ABC subunit UvrB;protein_id=WP_014614501.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 35212 35457 . - . ID=gene-CYJ02_RS09035;Name=CYJ02_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09035;old_locus_tag=CYJ02_09035 NZ_PJUQ01000018.1 Protein Homology CDS 35212 35457 . - 0 ID=cds-WP_031253646.1;Parent=gene-CYJ02_RS09035;Dbxref=GenBank:WP_031253646.1;Name=WP_031253646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=CYJ02_RS09035;product=CsbA family protein;protein_id=WP_031253646.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 35463 36104 . - . ID=gene-CYJ02_RS09040;Name=CYJ02_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09040;old_locus_tag=CYJ02_09040 NZ_PJUQ01000018.1 Protein Homology CDS 35463 36104 . - 0 ID=cds-WP_014614503.1;Parent=gene-CYJ02_RS09040;Dbxref=GenBank:WP_014614503.1;Name=WP_014614503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=CYJ02_RS09040;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_014614503.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 36312 37416 . - . ID=gene-CYJ02_RS09045;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09045;old_locus_tag=CYJ02_09045 NZ_PJUQ01000018.1 Protein Homology CDS 37345 37416 . - 0 ID=cds-WP_096533149.1;Parent=gene-CYJ02_RS09045;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ02_RS09045;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11 NZ_PJUQ01000018.1 Protein Homology CDS 36312 37343 . - 0 ID=cds-WP_096533149.1;Parent=gene-CYJ02_RS09045;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ02_RS09045;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 37456 39984 . - . ID=gene-CYJ02_RS09050;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09050;old_locus_tag=CYJ02_09050 NZ_PJUQ01000018.1 Protein Homology CDS 37456 39984 . - 0 ID=cds-WP_014614505.1;Parent=gene-CYJ02_RS09050;Dbxref=GenBank:WP_014614505.1;Name=WP_014614505.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168505.1;locus_tag=CYJ02_RS09050;product=preprotein translocase subunit SecA;protein_id=WP_014614505.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 40407 40967 . - . ID=gene-CYJ02_RS09055;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CYJ02_RS09055;old_locus_tag=CYJ02_09055 NZ_PJUQ01000018.1 Protein Homology CDS 40407 40967 . - 0 ID=cds-WP_014614506.1;Parent=gene-CYJ02_RS09055;Dbxref=GenBank:WP_014614506.1;Name=WP_014614506.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424517.1;locus_tag=CYJ02_RS09055;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_014614506.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 41032 41448 . - . ID=gene-CYJ02_RS12805;Name=CYJ02_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12805 NZ_PJUQ01000018.1 GeneMarkS-2+ CDS 41032 41448 . - 0 ID=cds-WP_225549922.1;Parent=gene-CYJ02_RS12805;Dbxref=GenBank:WP_225549922.1;Name=WP_225549922.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12805;product=ComF family protein;protein_id=WP_225549922.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 41697 42983 . - . ID=gene-CYJ02_RS09065;Name=CYJ02_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09065;old_locus_tag=CYJ02_09065 NZ_PJUQ01000018.1 Protein Homology CDS 41697 42983 . - 0 ID=cds-WP_015728758.1;Parent=gene-CYJ02_RS09065;Dbxref=GenBank:WP_015728758.1;Name=WP_015728758.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166120.1;locus_tag=CYJ02_RS09065;product=DEAD/DEAH box helicase family protein;protein_id=WP_015728758.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 43138 44022 . - . ID=gene-CYJ02_RS09070;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=CYJ02_RS09070;old_locus_tag=CYJ02_09070 NZ_PJUQ01000018.1 Protein Homology CDS 43138 44022 . - 0 ID=cds-WP_041614914.1;Parent=gene-CYJ02_RS09070;Dbxref=GenBank:WP_041614914.1;Name=WP_041614914.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=CYJ02_RS09070;product=fatty acid kinase binding subunit FakB1;protein_id=WP_041614914.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 44320 44955 . + . ID=gene-CYJ02_RS09075;Name=CYJ02_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09075;old_locus_tag=CYJ02_09075 NZ_PJUQ01000018.1 Protein Homology CDS 44320 44955 . + 0 ID=cds-WP_014614510.1;Parent=gene-CYJ02_RS09075;Dbxref=GenBank:WP_014614510.1;Name=WP_014614510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424513.1;locus_tag=CYJ02_RS09075;product=YigZ family protein;protein_id=WP_014614510.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 45111 46169 . - . ID=gene-CYJ02_RS09080;Name=CYJ02_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09080;old_locus_tag=CYJ02_09080 NZ_PJUQ01000018.1 Protein Homology CDS 45111 46169 . - 0 ID=cds-WP_014614511.1;Parent=gene-CYJ02_RS09080;Dbxref=GenBank:WP_014614511.1;Name=WP_014614511.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614511.1;locus_tag=CYJ02_RS09080;product=glycosyltransferase family 4 protein;protein_id=WP_014614511.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 46599 47669 . + . ID=gene-CYJ02_RS09085;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=CYJ02_RS09085;old_locus_tag=CYJ02_09085 NZ_PJUQ01000018.1 Protein Homology CDS 46599 47669 . + 0 ID=cds-WP_014614512.1;Parent=gene-CYJ02_RS09085;Dbxref=GenBank:WP_014614512.1;Name=WP_014614512.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614512.1;locus_tag=CYJ02_RS09085;product=GGDEF domain-containing protein GdpS;protein_id=WP_014614512.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 48163 48924 . + . ID=gene-CYJ02_RS09090;Name=CYJ02_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09090;old_locus_tag=CYJ02_09090 NZ_PJUQ01000018.1 Protein Homology CDS 48163 48924 . + 0 ID=cds-WP_014614513.1;Parent=gene-CYJ02_RS09090;Dbxref=GenBank:WP_014614513.1;Name=WP_014614513.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=CYJ02_RS09090;product=threonine/serine exporter family protein;protein_id=WP_014614513.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 48940 49443 . + . ID=gene-CYJ02_RS09095;Name=CYJ02_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09095;old_locus_tag=CYJ02_09095 NZ_PJUQ01000018.1 Protein Homology CDS 48940 49443 . + 0 ID=cds-WP_014614514.1;Parent=gene-CYJ02_RS09095;Dbxref=GenBank:WP_014614514.1;Name=WP_014614514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=CYJ02_RS09095;product=threonine/serine exporter family protein;protein_id=WP_014614514.1;transl_table=11 NZ_PJUQ01000018.1 RefSeq gene 49467 50690 . + . ID=gene-CYJ02_RS09100;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CYJ02_RS09100;old_locus_tag=CYJ02_09100 NZ_PJUQ01000018.1 Protein Homology CDS 49467 50690 . + 0 ID=cds-WP_015728755.1;Parent=gene-CYJ02_RS09100;Dbxref=GenBank:WP_015728755.1;Name=WP_015728755.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166127.1;locus_tag=CYJ02_RS09100;product=peptidase T;protein_id=WP_015728755.1;transl_table=11 ##sequence-region NZ_PJUQ01000019.1 1 49354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000019.1 RefSeq region 1 49354 . + . ID=NZ_PJUQ01000019.1:1..49354;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000019.1 RefSeq gene 107 1951 . - . ID=gene-CYJ02_RS09110;Name=CYJ02_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09110;old_locus_tag=CYJ02_09110 NZ_PJUQ01000019.1 Protein Homology CDS 107 1951 . - 0 ID=cds-WP_063284616.1;Parent=gene-CYJ02_RS09110;Dbxref=GenBank:WP_063284616.1;Name=WP_063284616.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614388.1;locus_tag=CYJ02_RS09110;product=acyltransferase family protein;protein_id=WP_063284616.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 2221 2529 . - . ID=gene-CYJ02_RS09115;Name=CYJ02_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09115;old_locus_tag=CYJ02_09115 NZ_PJUQ01000019.1 Protein Homology CDS 2221 2529 . - 0 ID=cds-WP_014614389.1;Parent=gene-CYJ02_RS09115;Dbxref=GenBank:WP_014614389.1;Name=WP_014614389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=CYJ02_RS09115;product=metal-sulfur cluster assembly factor;protein_id=WP_014614389.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 2643 3467 . + . ID=gene-CYJ02_RS09120;Name=CYJ02_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09120;old_locus_tag=CYJ02_09120 NZ_PJUQ01000019.1 Protein Homology CDS 2643 3467 . + 0 ID=cds-WP_014614390.1;Parent=gene-CYJ02_RS09120;Dbxref=GenBank:WP_014614390.1;Name=WP_014614390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614390.1;locus_tag=CYJ02_RS09120;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014614390.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 3498 4823 . + . ID=gene-CYJ02_RS09125;Name=CYJ02_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09125;old_locus_tag=CYJ02_09125 NZ_PJUQ01000019.1 Protein Homology CDS 3498 4823 . + 0 ID=cds-WP_014614391.1;Parent=gene-CYJ02_RS09125;Dbxref=GenBank:WP_014614391.1;Name=WP_014614391.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=CYJ02_RS09125;product=CoA-disulfide reductase;protein_id=WP_014614391.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 4927 5316 . - . ID=gene-CYJ02_RS09130;Name=CYJ02_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09130;old_locus_tag=CYJ02_09130 NZ_PJUQ01000019.1 Protein Homology CDS 4927 5316 . - 0 ID=cds-WP_014614393.1;Parent=gene-CYJ02_RS09130;Dbxref=GenBank:WP_014614393.1;Name=WP_014614393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=CYJ02_RS09130;product=YisL family protein;protein_id=WP_014614393.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 5652 6557 . - . ID=gene-CYJ02_RS09135;Name=CYJ02_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09135;old_locus_tag=CYJ02_09135 NZ_PJUQ01000019.1 Protein Homology CDS 5652 6557 . - 0 ID=cds-WP_014614394.1;Parent=gene-CYJ02_RS09135;Dbxref=GenBank:WP_014614394.1;Name=WP_014614394.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220049.1;locus_tag=CYJ02_RS09135;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014614394.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 6640 10284 . - . ID=gene-CYJ02_RS09140;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09140;old_locus_tag=CYJ02_09140 NZ_PJUQ01000019.1 Protein Homology CDS 6640 10284 . - 0 ID=cds-WP_101431610.1;Parent=gene-CYJ02_RS09140;Dbxref=GenBank:WP_101431610.1;Name=WP_101431610.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168273.1;locus_tag=CYJ02_RS09140;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_101431610.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 10281 13745 . - . ID=gene-CYJ02_RS09145;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09145;old_locus_tag=CYJ02_09145 NZ_PJUQ01000019.1 Protein Homology CDS 10281 13745 . - 0 ID=cds-WP_101431611.1;Parent=gene-CYJ02_RS09145;Dbxref=GenBank:WP_101431611.1;Name=WP_101431611.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=CYJ02_RS09145;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_101431611.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 13964 14542 . - . ID=gene-CYJ02_RS09150;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09150;old_locus_tag=CYJ02_09150 NZ_PJUQ01000019.1 Protein Homology CDS 13964 14542 . - 0 ID=cds-WP_070407532.1;Parent=gene-CYJ02_RS09150;Dbxref=GenBank:WP_070407532.1;Name=WP_070407532.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168275.1;locus_tag=CYJ02_RS09150;product=signal peptidase I;protein_id=WP_070407532.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 14561 15079 . - . ID=gene-CYJ02_RS09155;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09155;old_locus_tag=CYJ02_09155 NZ_PJUQ01000019.1 Protein Homology CDS 14561 15079 . - 0 ID=cds-WP_172425806.1;Parent=gene-CYJ02_RS09155;Dbxref=GenBank:WP_172425806.1;Name=WP_172425806.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424627.1;locus_tag=CYJ02_RS09155;product=signal peptidase I;protein_id=WP_172425806.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 15323 16654 . - . ID=gene-CYJ02_RS09160;Name=CYJ02_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09160;old_locus_tag=CYJ02_09160 NZ_PJUQ01000019.1 Protein Homology CDS 15323 16654 . - 0 ID=cds-WP_014614399.1;Parent=gene-CYJ02_RS09160;Dbxref=GenBank:WP_014614399.1;Name=WP_014614399.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CYJ02_RS09160;product=glucose-6-phosphate isomerase;protein_id=WP_014614399.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 16847 18049 . + . ID=gene-CYJ02_RS09165;Name=CYJ02_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09165;old_locus_tag=CYJ02_09165 NZ_PJUQ01000019.1 Protein Homology CDS 16847 18049 . + 0 ID=cds-WP_014614400.1;Parent=gene-CYJ02_RS09165;Dbxref=GenBank:WP_014614400.1;Name=WP_014614400.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614400.1;locus_tag=CYJ02_RS09165;product=argininosuccinate synthase;protein_id=WP_014614400.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 18042 19433 . + . ID=gene-CYJ02_RS09170;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CYJ02_RS09170;old_locus_tag=CYJ02_09170 NZ_PJUQ01000019.1 Protein Homology CDS 18042 19433 . + 0 ID=cds-WP_101431612.1;Parent=gene-CYJ02_RS09170;Dbxref=GenBank:WP_101431612.1;Name=WP_101431612.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220051.1;locus_tag=CYJ02_RS09170;product=argininosuccinate lyase;protein_id=WP_101431612.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 19671 20606 . + . ID=gene-CYJ02_RS09175;Name=CYJ02_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09175;old_locus_tag=CYJ02_09175 NZ_PJUQ01000019.1 Protein Homology CDS 19671 20606 . + 0 ID=cds-WP_014614402.1;Parent=gene-CYJ02_RS09175;Dbxref=GenBank:WP_014614402.1;Name=WP_014614402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220052.1;locus_tag=CYJ02_RS09175;product=glycerophosphodiester phosphodiesterase;protein_id=WP_014614402.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 20919 22163 . - . ID=gene-CYJ02_RS09180;Name=CYJ02_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09180;old_locus_tag=CYJ02_09180 NZ_PJUQ01000019.1 Protein Homology CDS 20919 22163 . - 0 ID=cds-WP_014614403.1;Parent=gene-CYJ02_RS09180;Dbxref=GenBank:WP_014614403.1;Name=WP_014614403.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499448.1;locus_tag=CYJ02_RS09180;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_014614403.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 22271 23470 . - . ID=gene-CYJ02_RS09185;Name=CYJ02_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09185;old_locus_tag=CYJ02_09185 NZ_PJUQ01000019.1 Protein Homology CDS 22271 23470 . - 0 ID=cds-WP_063284612.1;Parent=gene-CYJ02_RS09185;Dbxref=GenBank:WP_063284612.1;Name=WP_063284612.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=ornithine aminotransferase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728871.1;locus_tag=CYJ02_RS09185;product=ornithine--oxo-acid transaminase;protein_id=WP_063284612.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 23646 25190 . - . ID=gene-CYJ02_RS09190;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09190;old_locus_tag=CYJ02_09190 NZ_PJUQ01000019.1 Protein Homology CDS 23646 25190 . - 0 ID=cds-WP_014614405.1;Parent=gene-CYJ02_RS09190;Dbxref=GenBank:WP_014614405.1;Name=WP_014614405.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=CYJ02_RS09190;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_014614405.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 25600 25989 . + . ID=gene-CYJ02_RS09195;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=CYJ02_RS09195;old_locus_tag=CYJ02_09195 NZ_PJUQ01000019.1 Protein Homology CDS 25600 25989 . + 0 ID=cds-WP_014614406.1;Parent=gene-CYJ02_RS09195;Dbxref=GenBank:WP_014614406.1;Name=WP_014614406.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=CYJ02_RS09195;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_014614406.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 26422 26667 . - . ID=gene-CYJ02_RS09200;Name=CYJ02_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09200;old_locus_tag=CYJ02_09200 NZ_PJUQ01000019.1 Protein Homology CDS 26422 26667 . - 0 ID=cds-WP_241901340.1;Parent=gene-CYJ02_RS09200;Dbxref=GenBank:WP_241901340.1;Name=WP_241901340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614407.1;locus_tag=CYJ02_RS09200;product=hypothetical protein;protein_id=WP_241901340.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 27302 27502 . + . ID=gene-CYJ02_RS09205;Name=CYJ02_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09205;old_locus_tag=CYJ02_09205 NZ_PJUQ01000019.1 Protein Homology CDS 27302 27502 . + 0 ID=cds-WP_014614408.1;Parent=gene-CYJ02_RS09205;Dbxref=GenBank:WP_014614408.1;Name=WP_014614408.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=CYJ02_RS09205;product=cold-shock protein;protein_id=WP_014614408.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 27564 27830 . - . ID=gene-CYJ02_RS09210;Name=CYJ02_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09210;old_locus_tag=CYJ02_09210 NZ_PJUQ01000019.1 Protein Homology CDS 27564 27830 . - 0 ID=cds-WP_101431613.1;Parent=gene-CYJ02_RS09210;Dbxref=GenBank:WP_101431613.1;Name=WP_101431613.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=CYJ02_RS09210;product=FmdB family zinc ribbon protein;protein_id=WP_101431613.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 27830 29020 . - . ID=gene-CYJ02_RS09215;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09215;old_locus_tag=CYJ02_09215 NZ_PJUQ01000019.1 Protein Homology CDS 27830 29020 . - 0 ID=cds-WP_020219499.1;Parent=gene-CYJ02_RS09215;Dbxref=GenBank:WP_020219499.1;Name=WP_020219499.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614410.1;locus_tag=CYJ02_RS09215;product=formamidase;protein_id=WP_020219499.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 29204 29464 . - . ID=gene-CYJ02_RS09220;Name=CYJ02_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09220;old_locus_tag=CYJ02_09220 NZ_PJUQ01000019.1 Protein Homology CDS 29204 29464 . - 0 ID=cds-WP_014614411.1;Parent=gene-CYJ02_RS09220;Dbxref=GenBank:WP_014614411.1;Name=WP_014614411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=CYJ02_RS09220;product=DUF1871 family protein;protein_id=WP_014614411.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 29486 30079 . - . ID=gene-CYJ02_RS09225;Name=CYJ02_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09225;old_locus_tag=CYJ02_09225 NZ_PJUQ01000019.1 Protein Homology CDS 29486 30079 . - 0 ID=cds-WP_014614412.1;Parent=gene-CYJ02_RS09225;Dbxref=GenBank:WP_014614412.1;Name=WP_014614412.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=CYJ02_RS09225;product=peptidylprolyl isomerase;protein_id=WP_014614412.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 30153 30533 . + . ID=gene-CYJ02_RS09230;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09230;old_locus_tag=CYJ02_09230 NZ_PJUQ01000019.1 Protein Homology CDS 30153 30533 . + 0 ID=cds-WP_014614413.1;Parent=gene-CYJ02_RS09230;Dbxref=GenBank:WP_014614413.1;Name=WP_014614413.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614413.1;locus_tag=CYJ02_RS09230;product=sporulation phosphorelay system protein KapB;protein_id=WP_014614413.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 30660 33077 . + . ID=gene-CYJ02_RS09235;Name=CYJ02_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09235;old_locus_tag=CYJ02_09235 NZ_PJUQ01000019.1 Protein Homology CDS 30660 33077 . + 0 ID=cds-WP_014614414.1;Parent=gene-CYJ02_RS09235;Dbxref=GenBank:WP_014614414.1;Name=WP_014614414.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=CYJ02_RS09235;product=Na+/H+ antiporter subunit A;protein_id=WP_014614414.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 33040 33486 . + . ID=gene-CYJ02_RS09240;Name=CYJ02_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09240;old_locus_tag=CYJ02_09240 NZ_PJUQ01000019.1 Protein Homology CDS 33040 33486 . + 0 ID=cds-WP_014614415.1;Parent=gene-CYJ02_RS09240;Dbxref=GenBank:WP_014614415.1;Name=WP_014614415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=CYJ02_RS09240;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_014614415.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 33486 33833 . + . ID=gene-CYJ02_RS09245;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=CYJ02_RS09245;old_locus_tag=CYJ02_09245 NZ_PJUQ01000019.1 Protein Homology CDS 33486 33833 . + 0 ID=cds-WP_014614416.1;Parent=gene-CYJ02_RS09245;Dbxref=GenBank:WP_014614416.1;Name=WP_014614416.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=CYJ02_RS09245;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_014614416.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 33823 35322 . + . ID=gene-CYJ02_RS09250;Name=CYJ02_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09250;old_locus_tag=CYJ02_09250 NZ_PJUQ01000019.1 Protein Homology CDS 33823 35322 . + 0 ID=cds-WP_101431614.1;Parent=gene-CYJ02_RS09250;Dbxref=GenBank:WP_101431614.1;Name=WP_101431614.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166977.1;locus_tag=CYJ02_RS09250;product=Na+/H+ antiporter subunit D;protein_id=WP_101431614.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 35324 35803 . + . ID=gene-CYJ02_RS09255;Name=CYJ02_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09255;old_locus_tag=CYJ02_09255 NZ_PJUQ01000019.1 Protein Homology CDS 35324 35803 . + 0 ID=cds-WP_014614418.1;Parent=gene-CYJ02_RS09255;Dbxref=GenBank:WP_014614418.1;Name=WP_014614418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=CYJ02_RS09255;product=Na+/H+ antiporter subunit E;protein_id=WP_014614418.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 35803 36096 . + . ID=gene-CYJ02_RS09260;Name=CYJ02_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09260;old_locus_tag=CYJ02_09260 NZ_PJUQ01000019.1 Protein Homology CDS 35803 36096 . + 0 ID=cds-WP_014614419.1;Parent=gene-CYJ02_RS09260;Dbxref=GenBank:WP_014614419.1;Name=WP_014614419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=CYJ02_RS09260;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_014614419.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 36074 36430 . + . ID=gene-CYJ02_RS09265;Name=CYJ02_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09265;old_locus_tag=CYJ02_09265 NZ_PJUQ01000019.1 Protein Homology CDS 36074 36430 . + 0 ID=cds-WP_014614420.1;Parent=gene-CYJ02_RS09265;Dbxref=GenBank:WP_014614420.1;Name=WP_014614420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=CYJ02_RS09265;product=Na+/H+ antiporter subunit G1;protein_id=WP_014614420.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 37367 37744 . - . ID=gene-CYJ02_RS09270;Name=CYJ02_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09270;old_locus_tag=CYJ02_09270 NZ_PJUQ01000019.1 Protein Homology CDS 37367 37744 . - 0 ID=cds-WP_037543544.1;Parent=gene-CYJ02_RS09270;Dbxref=GenBank:WP_037543544.1;Name=WP_037543544.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728863.1;locus_tag=CYJ02_RS09270;product=PaaI family thioesterase;protein_id=WP_037543544.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 37768 39084 . - . ID=gene-CYJ02_RS09275;Name=CYJ02_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09275;old_locus_tag=CYJ02_09275 NZ_PJUQ01000019.1 Protein Homology CDS 37768 39084 . - 0 ID=cds-WP_063284811.1;Parent=gene-CYJ02_RS09275;Dbxref=GenBank:WP_063284811.1;Name=WP_063284811.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=CYJ02_RS09275;product=Na+/H+ antiporter family protein;protein_id=WP_063284811.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 39219 40706 . - . ID=gene-CYJ02_RS09280;Name=CYJ02_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09280;old_locus_tag=CYJ02_09280 NZ_PJUQ01000019.1 Protein Homology CDS 39219 40706 . - 0 ID=cds-WP_101431615.1;Parent=gene-CYJ02_RS09280;Dbxref=GenBank:WP_101431615.1;Name=WP_101431615.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0046872,GO:0070006,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=manganese ion binding|0030145||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614423.1;locus_tag=CYJ02_RS09280;product=leucyl aminopeptidase family protein;protein_id=WP_101431615.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 40971 42173 . - . ID=gene-CYJ02_RS09285;Name=CYJ02_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09285;old_locus_tag=CYJ02_09285 NZ_PJUQ01000019.1 Protein Homology CDS 40971 42173 . - 0 ID=cds-WP_014614424.1;Parent=gene-CYJ02_RS09285;Dbxref=GenBank:WP_014614424.1;Name=WP_014614424.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=CYJ02_RS09285;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014614424.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 42594 42953 . - . ID=gene-CYJ02_RS09290;Name=CYJ02_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09290;old_locus_tag=CYJ02_09290 NZ_PJUQ01000019.1 Protein Homology CDS 42594 42953 . - 0 ID=cds-WP_014614425.1;Parent=gene-CYJ02_RS09290;Dbxref=GenBank:WP_014614425.1;Name=WP_014614425.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=CYJ02_RS09290;product=HesB/IscA family protein;protein_id=WP_014614425.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 42966 43202 . - . ID=gene-CYJ02_RS09295;Name=CYJ02_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09295;old_locus_tag=CYJ02_09295 NZ_PJUQ01000019.1 Protein Homology CDS 42966 43202 . - 0 ID=cds-WP_014614426.1;Parent=gene-CYJ02_RS09295;Dbxref=GenBank:WP_014614426.1;Name=WP_014614426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483813.1;locus_tag=CYJ02_RS09295;product=YuzB family protein;protein_id=WP_014614426.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 43493 44557 . + . ID=gene-CYJ02_RS09300;Name=CYJ02_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09300;old_locus_tag=CYJ02_09300 NZ_PJUQ01000019.1 Protein Homology CDS 43493 44557 . + 0 ID=cds-WP_065520629.1;Parent=gene-CYJ02_RS09300;Dbxref=GenBank:WP_065520629.1;Name=WP_065520629.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483814.1;locus_tag=CYJ02_RS09300;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_065520629.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 44908 45246 . - . ID=gene-CYJ02_RS09305;Name=CYJ02_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09305;old_locus_tag=CYJ02_09305 NZ_PJUQ01000019.1 Protein Homology CDS 44908 45246 . - 0 ID=cds-WP_014614428.1;Parent=gene-CYJ02_RS09305;Dbxref=GenBank:WP_014614428.1;Name=WP_014614428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614428.1;locus_tag=CYJ02_RS09305;product=YuzD family protein;protein_id=WP_014614428.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 45350 45592 . + . ID=gene-CYJ02_RS09310;Name=CYJ02_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09310;old_locus_tag=CYJ02_09310 NZ_PJUQ01000019.1 Protein Homology CDS 45350 45592 . + 0 ID=cds-WP_014614429.1;Parent=gene-CYJ02_RS09310;Dbxref=GenBank:WP_014614429.1;Name=WP_014614429.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=CYJ02_RS09310;product=NifU family protein;protein_id=WP_014614429.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 46177 47142 . - . ID=gene-CYJ02_RS09315;Name=CYJ02_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09315;old_locus_tag=CYJ02_09315 NZ_PJUQ01000019.1 Protein Homology CDS 46177 47142 . - 0 ID=cds-WP_014614430.1;Parent=gene-CYJ02_RS09315;Dbxref=GenBank:WP_014614430.1;Name=WP_014614430.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=CYJ02_RS09315;product=2-hydroxyacid dehydrogenase;protein_id=WP_014614430.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 47149 47934 . - . ID=gene-CYJ02_RS09320;Name=CYJ02_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09320;old_locus_tag=CYJ02_09320 NZ_PJUQ01000019.1 Protein Homology CDS 47149 47934 . - 0 ID=cds-WP_101431616.1;Parent=gene-CYJ02_RS09320;Dbxref=GenBank:WP_101431616.1;Name=WP_101431616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166989.1;locus_tag=CYJ02_RS09320;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_101431616.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 47938 48369 . - . ID=gene-CYJ02_RS09325;Name=CYJ02_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09325;old_locus_tag=CYJ02_09325 NZ_PJUQ01000019.1 Protein Homology CDS 47938 48369 . - 0 ID=cds-WP_031253621.1;Parent=gene-CYJ02_RS09325;Dbxref=GenBank:WP_031253621.1;Name=WP_031253621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481626.1;locus_tag=CYJ02_RS09325;product=DUF86 domain-containing protein;protein_id=WP_031253621.1;transl_table=11 NZ_PJUQ01000019.1 RefSeq gene 48470 48736 . + . ID=gene-CYJ02_RS09330;Name=CYJ02_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09330;old_locus_tag=CYJ02_09330 NZ_PJUQ01000019.1 Protein Homology CDS 48470 48736 . + 0 ID=cds-WP_020219501.1;Parent=gene-CYJ02_RS09330;Dbxref=GenBank:WP_020219501.1;Name=WP_020219501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=CYJ02_RS09330;product=DUF3055 domain-containing protein;protein_id=WP_020219501.1;transl_table=11 ##sequence-region NZ_PJUQ01000002.1 1 197454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000002.1 RefSeq region 1 197454 . + . ID=NZ_PJUQ01000002.1:1..197454;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000002.1 RefSeq gene 542 3991 . + . ID=gene-CYJ02_RS01070;Name=CYJ02_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01070;old_locus_tag=CYJ02_01070 NZ_PJUQ01000002.1 Protein Homology CDS 542 3991 . + 0 ID=cds-WP_101431263.1;Parent=gene-CYJ02_RS01070;Dbxref=GenBank:WP_101431263.1;Name=WP_101431263.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614227.1;locus_tag=CYJ02_RS01070;product=pyruvate carboxylase;protein_id=WP_101431263.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 4129 5043 . - . ID=gene-CYJ02_RS01075;Name=CYJ02_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01075;old_locus_tag=CYJ02_01075 NZ_PJUQ01000002.1 Protein Homology CDS 4129 5043 . - 0 ID=cds-WP_101431264.1;Parent=gene-CYJ02_RS01075;Dbxref=GenBank:WP_101431264.1;Name=WP_101431264.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728962.1;locus_tag=CYJ02_RS01075;product=COX15/CtaA family protein;protein_id=WP_101431264.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 5255 6166 . + . ID=gene-CYJ02_RS01080;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CYJ02_RS01080;old_locus_tag=CYJ02_01080 NZ_PJUQ01000002.1 Protein Homology CDS 5255 6166 . + 0 ID=cds-WP_096533598.1;Parent=gene-CYJ02_RS01080;Dbxref=GenBank:WP_096533598.1;Name=WP_096533598.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276112.1;locus_tag=CYJ02_RS01080;product=heme o synthase;protein_id=WP_096533598.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 6194 6655 . + . ID=gene-CYJ02_RS01085;Name=CYJ02_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01085;old_locus_tag=CYJ02_01085 NZ_PJUQ01000002.1 Protein Homology CDS 6194 6655 . + 0 ID=cds-WP_014614224.1;Parent=gene-CYJ02_RS01085;Dbxref=GenBank:WP_014614224.1;Name=WP_014614224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=CYJ02_RS01085;product=DUF420 domain-containing protein;protein_id=WP_014614224.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 7299 8369 . + . ID=gene-CYJ02_RS01090;Name=CYJ02_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01090;old_locus_tag=CYJ02_01090 NZ_PJUQ01000002.1 Protein Homology CDS 7299 8369 . + 0 ID=cds-WP_014614223.1;Parent=gene-CYJ02_RS01090;Dbxref=GenBank:WP_014614223.1;Name=WP_014614223.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=CYJ02_RS01090;product=CAP domain-containing protein;protein_id=WP_014614223.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 8371 8811 . + . ID=gene-CYJ02_RS01095;Name=CYJ02_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01095;old_locus_tag=CYJ02_01095 NZ_PJUQ01000002.1 Protein Homology CDS 8371 8811 . + 0 ID=cds-WP_101431265.1;Parent=gene-CYJ02_RS01095;Dbxref=GenBank:WP_101431265.1;Name=WP_101431265.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614222.1;locus_tag=CYJ02_RS01095;product=YlbF/YmcA family competence regulator;protein_id=WP_101431265.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 8876 9808 . - . ID=gene-CYJ02_RS01100;Name=CYJ02_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01100;old_locus_tag=CYJ02_01100 NZ_PJUQ01000002.1 Protein Homology CDS 8876 9808 . - 0 ID=cds-WP_014614221.1;Parent=gene-CYJ02_RS01100;Dbxref=GenBank:WP_014614221.1;Name=WP_014614221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=CYJ02_RS01100;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_014614221.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 9902 10147 . + . ID=gene-CYJ02_RS01105;Name=CYJ02_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01105;old_locus_tag=CYJ02_01105 NZ_PJUQ01000002.1 Protein Homology CDS 9902 10147 . + 0 ID=cds-WP_014614220.1;Parent=gene-CYJ02_RS01105;Dbxref=GenBank:WP_014614220.1;Name=WP_014614220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614220.1;locus_tag=CYJ02_RS01105;product=YlbG family protein;protein_id=WP_014614220.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 10150 10539 . - . ID=gene-CYJ02_RS01110;Name=CYJ02_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01110;old_locus_tag=CYJ02_01110 NZ_PJUQ01000002.1 Protein Homology CDS 10150 10539 . - 0 ID=cds-WP_037543286.1;Parent=gene-CYJ02_RS01110;Dbxref=GenBank:WP_037543286.1;Name=WP_037543286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=CYJ02_RS01110;product=DUF7147 family protein;protein_id=WP_037543286.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 10602 11153 . + . ID=gene-CYJ02_RS01115;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01115;old_locus_tag=CYJ02_01115 NZ_PJUQ01000002.1 Protein Homology CDS 10602 11153 . + 0 ID=cds-WP_014614218.1;Parent=gene-CYJ02_RS01115;Dbxref=GenBank:WP_014614218.1;Name=WP_014614218.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=CYJ02_RS01115;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_014614218.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 11146 11637 . + . ID=gene-CYJ02_RS01120;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01120;old_locus_tag=CYJ02_01120 NZ_PJUQ01000002.1 Protein Homology CDS 11146 11637 . + 0 ID=cds-WP_014614217.1;Parent=gene-CYJ02_RS01120;Dbxref=GenBank:WP_014614217.1;Name=WP_014614217.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=CYJ02_RS01120;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014614217.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 11969 13105 . - . ID=gene-CYJ02_RS01125;Name=CYJ02_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01125;old_locus_tag=CYJ02_01125 NZ_PJUQ01000002.1 Protein Homology CDS 11969 13105 . - 0 ID=cds-WP_014614216.1;Parent=gene-CYJ02_RS01125;Dbxref=GenBank:WP_014614216.1;Name=WP_014614216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843614.1;locus_tag=CYJ02_RS01125;product=nucleotidyltransferase;protein_id=WP_014614216.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 13232 13771 . + . ID=gene-CYJ02_RS01130;Name=CYJ02_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01130;old_locus_tag=CYJ02_01130 NZ_PJUQ01000002.1 Protein Homology CDS 13232 13771 . + 0 ID=cds-WP_014614215.1;Parent=gene-CYJ02_RS01130;Dbxref=GenBank:WP_014614215.1;Name=WP_014614215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=CYJ02_RS01130;product=YceD family protein;protein_id=WP_014614215.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 13828 14001 . + . ID=gene-CYJ02_RS01135;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CYJ02_RS01135;old_locus_tag=CYJ02_01135 NZ_PJUQ01000002.1 Protein Homology CDS 13828 14001 . + 0 ID=cds-WP_014614214.1;Parent=gene-CYJ02_RS01135;Dbxref=GenBank:WP_014614214.1;Name=WP_014614214.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CYJ02_RS01135;product=50S ribosomal protein L32;protein_id=WP_014614214.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 14115 14861 . + . ID=gene-CYJ02_RS01140;Name=CYJ02_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01140;old_locus_tag=CYJ02_01140 NZ_PJUQ01000002.1 Protein Homology CDS 14115 14861 . + 0 ID=cds-WP_101431266.1;Parent=gene-CYJ02_RS01140;Dbxref=GenBank:WP_101431266.1;Name=WP_101431266.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=CYJ02_RS01140;product=TrmH family RNA methyltransferase;protein_id=WP_101431266.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 15270 16340 . + . ID=gene-CYJ02_RS01145;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CYJ02_RS01145;old_locus_tag=CYJ02_01145 NZ_PJUQ01000002.1 Protein Homology CDS 15270 16340 . + 0 ID=cds-WP_014614212.1;Parent=gene-CYJ02_RS01145;Dbxref=GenBank:WP_014614212.1;Name=WP_014614212.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168152.1;locus_tag=CYJ02_RS01145;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014614212.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 16327 18732 . + . ID=gene-CYJ02_RS01150;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CYJ02_RS01150;old_locus_tag=CYJ02_01150 NZ_PJUQ01000002.1 Protein Homology CDS 16327 18732 . + 0 ID=cds-WP_101431267.1;Parent=gene-CYJ02_RS01150;Dbxref=GenBank:WP_101431267.1;Name=WP_101431267.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=CYJ02_RS01150;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_101431267.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 18844 19437 . - . ID=gene-CYJ02_RS01155;Name=merB;gbkey=Gene;gene=merB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01155;old_locus_tag=CYJ02_01155 NZ_PJUQ01000002.1 Protein Homology CDS 18844 19437 . - 0 ID=cds-WP_181137783.1;Parent=gene-CYJ02_RS01155;Dbxref=GenBank:WP_181137783.1;Name=WP_181137783.1;Ontology_term=GO:0018836;gbkey=CDS;gene=merB;go_function=alkylmercury lyase activity|0018836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168150.1;locus_tag=CYJ02_RS01155;product=organomercurial lyase;protein_id=WP_181137783.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 20121 21059 . - . ID=gene-CYJ02_RS01160;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01160;old_locus_tag=CYJ02_01160 NZ_PJUQ01000002.1 Protein Homology CDS 20121 21059 . - 0 ID=cds-WP_101431268.1;Parent=gene-CYJ02_RS01160;Dbxref=GenBank:WP_101431268.1;Name=WP_101431268.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728969.1;locus_tag=CYJ02_RS01160;product=ribonuclease HIII;protein_id=WP_101431268.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 21202 21468 . + . ID=gene-CYJ02_RS01165;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01165;old_locus_tag=CYJ02_01165 NZ_PJUQ01000002.1 Protein Homology CDS 21202 21468 . + 0 ID=cds-WP_014614208.1;Parent=gene-CYJ02_RS01165;Dbxref=GenBank:WP_014614208.1;Name=WP_014614208.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614208.1;locus_tag=CYJ02_RS01165;product=cell division protein ZapA;protein_id=WP_014614208.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 21470 21991 . + . ID=gene-CYJ02_RS01170;Name=CYJ02_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01170;old_locus_tag=CYJ02_01170 NZ_PJUQ01000002.1 Protein Homology CDS 21470 21991 . + 0 ID=cds-WP_101431269.1;Parent=gene-CYJ02_RS01170;Dbxref=GenBank:WP_101431269.1;Name=WP_101431269.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166358.1;locus_tag=CYJ02_RS01170;product=CvpA family protein;protein_id=WP_101431269.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 22064 23773 . + . ID=gene-CYJ02_RS01175;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=CYJ02_RS01175;old_locus_tag=CYJ02_01175 NZ_PJUQ01000002.1 Protein Homology CDS 22064 23773 . + 0 ID=cds-WP_101431270.1;Parent=gene-CYJ02_RS01175;Dbxref=GenBank:WP_101431270.1;Name=WP_101431270.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614206.1;locus_tag=CYJ02_RS01175;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_101431270.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 23789 26137 . + . ID=gene-CYJ02_RS01180;Name=CYJ02_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01180;old_locus_tag=CYJ02_01180 NZ_PJUQ01000002.1 Protein Homology CDS 23789 26137 . + 0 ID=cds-WP_101431271.1;Parent=gene-CYJ02_RS01180;Dbxref=GenBank:WP_101431271.1;Name=WP_101431271.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=CYJ02_RS01180;product=endonuclease MutS2;protein_id=WP_101431271.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 26216 26530 . + . ID=gene-CYJ02_RS01185;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01185;old_locus_tag=CYJ02_01185 NZ_PJUQ01000002.1 Protein Homology CDS 26216 26530 . + 0 ID=cds-WP_014614204.1;Parent=gene-CYJ02_RS01185;Dbxref=GenBank:WP_014614204.1;Name=WP_014614204.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=CYJ02_RS01185;product=thioredoxin;protein_id=WP_014614204.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 26797 28584 . + . ID=gene-CYJ02_RS01190;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01190;old_locus_tag=CYJ02_01190 NZ_PJUQ01000002.1 Protein Homology CDS 26797 28584 . + 0 ID=cds-WP_101431272.1;Parent=gene-CYJ02_RS01190;Dbxref=GenBank:WP_101431272.1;Name=WP_101431272.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614203.1;locus_tag=CYJ02_RS01190;product=excinuclease ABC subunit UvrC;protein_id=WP_101431272.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 28749 29360 . + . ID=gene-CYJ02_RS01195;Name=CYJ02_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01195;old_locus_tag=CYJ02_01195 NZ_PJUQ01000002.1 Protein Homology CDS 28749 29360 . + 0 ID=cds-WP_014614202.1;Parent=gene-CYJ02_RS01195;Dbxref=GenBank:WP_014614202.1;Name=WP_014614202.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637638.1;locus_tag=CYJ02_RS01195;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_014614202.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 29393 31159 . + . ID=gene-CYJ02_RS01200;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01200;old_locus_tag=CYJ02_01200 NZ_PJUQ01000002.1 Protein Homology CDS 29393 31159 . + 0 ID=cds-WP_014614201.1;Parent=gene-CYJ02_RS01200;Dbxref=GenBank:WP_014614201.1;Name=WP_014614201.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=CYJ02_RS01200;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_014614201.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 31159 31974 . + . ID=gene-CYJ02_RS01205;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01205;old_locus_tag=CYJ02_01205 NZ_PJUQ01000002.1 Protein Homology CDS 31159 31974 . + 0 ID=cds-WP_014614200.1;Parent=gene-CYJ02_RS01205;Dbxref=GenBank:WP_014614200.1;Name=WP_014614200.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365172.1;locus_tag=CYJ02_RS01205;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_014614200.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 32225 33022 . + . ID=gene-CYJ02_RS01210;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=CYJ02_RS01210;old_locus_tag=CYJ02_01210 NZ_PJUQ01000002.1 Protein Homology CDS 32225 33022 . + 0 ID=cds-WP_014614199.1;Parent=gene-CYJ02_RS01210;Dbxref=GenBank:WP_014614199.1;Name=WP_014614199.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166350.1;locus_tag=CYJ02_RS01210;product=glutamate racemase;protein_id=WP_014614199.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 33034 33618 . + . ID=gene-CYJ02_RS01215;Name=CYJ02_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01215;old_locus_tag=CYJ02_01215 NZ_PJUQ01000002.1 Protein Homology CDS 33034 33618 . + 0 ID=cds-WP_101431273.1;Parent=gene-CYJ02_RS01215;Dbxref=GenBank:WP_101431273.1;Name=WP_101431273.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614198.1;locus_tag=CYJ02_RS01215;product=XTP/dITP diphosphatase;protein_id=WP_101431273.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 33615 34124 . + . ID=gene-CYJ02_RS01220;Name=CYJ02_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01220;old_locus_tag=CYJ02_01220 NZ_PJUQ01000002.1 Protein Homology CDS 33615 34124 . + 0 ID=cds-WP_101431274.1;Parent=gene-CYJ02_RS01220;Dbxref=GenBank:WP_101431274.1;Name=WP_101431274.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166348.1;locus_tag=CYJ02_RS01220;product=YfcE family phosphodiesterase;protein_id=WP_101431274.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 34315 34380 . - . ID=gene-CYJ02_RS12980;Name=CYJ02_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12980;old_locus_tag=CYJ02_01225 NZ_PJUQ01000002.1 Protein Homology CDS 34315 34380 . - 0 ID=cds-WP_095658924.1;Parent=gene-CYJ02_RS12980;Dbxref=GenBank:WP_095658924.1;Name=WP_095658924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=CYJ02_RS12980;product=epsilon family phenol-soluble modulin;protein_id=WP_095658924.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq pseudogene 35034 35573 . + . ID=gene-CYJ02_RS01230;Name=CYJ02_RS01230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS01230;old_locus_tag=CYJ02_01230;partial=true;pseudo=true;start_range=.,35034 NZ_PJUQ01000002.1 Protein Homology CDS 35034 35573 . + 0 ID=cds-CYJ02_RS01230;Parent=gene-CYJ02_RS01230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500659.1;locus_tag=CYJ02_RS01230;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,35034;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 35839 36060 . + . ID=gene-CYJ02_RS12640;Name=CYJ02_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12640;old_locus_tag=CYJ02_01235 NZ_PJUQ01000002.1 GeneMarkS-2+ CDS 35839 36060 . + 0 ID=cds-WP_133121707.1;Parent=gene-CYJ02_RS12640;Dbxref=GenBank:WP_133121707.1;Name=WP_133121707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12640;product=hypothetical protein;protein_id=WP_133121707.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 36170 36307 . + . ID=gene-CYJ02_RS12645;Name=CYJ02_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12645 NZ_PJUQ01000002.1 Protein Homology CDS 36170 36307 . + 0 ID=cds-WP_233508767.1;Parent=gene-CYJ02_RS12645;Dbxref=GenBank:WP_233508767.1;Name=WP_233508767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614196.1;locus_tag=CYJ02_RS12645;product=hypothetical protein;protein_id=WP_233508767.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 36326 36688 . + . ID=gene-CYJ02_RS01240;Name=CYJ02_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01240;old_locus_tag=CYJ02_01240 NZ_PJUQ01000002.1 Protein Homology CDS 36326 36688 . + 0 ID=cds-WP_101431276.1;Parent=gene-CYJ02_RS01240;Dbxref=GenBank:WP_101431276.1;Name=WP_101431276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549762.1;locus_tag=CYJ02_RS01240;product=hypothetical protein;protein_id=WP_101431276.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 37121 37330 . + . ID=gene-CYJ02_RS12650;Name=CYJ02_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12650;old_locus_tag=CYJ02_01245 NZ_PJUQ01000002.1 Protein Homology CDS 37121 37330 . + 0 ID=cds-WP_101431277.1;Parent=gene-CYJ02_RS12650;Dbxref=GenBank:WP_101431277.1;Name=WP_101431277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071310.1;locus_tag=CYJ02_RS12650;product=hypothetical protein;protein_id=WP_101431277.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 37431 37504 . - . ID=gene-CYJ02_RS01250;Name=CYJ02_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS01250;old_locus_tag=CYJ02_01250 NZ_PJUQ01000002.1 tRNAscan-SE tRNA 37431 37504 . - . ID=rna-CYJ02_RS01250;Parent=gene-CYJ02_RS01250;anticodon=(pos:complement(37468..37470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS01250;product=tRNA-Arg NZ_PJUQ01000002.1 tRNAscan-SE exon 37431 37504 . - . ID=exon-CYJ02_RS01250-1;Parent=rna-CYJ02_RS01250;anticodon=(pos:complement(37468..37470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS01250;product=tRNA-Arg NZ_PJUQ01000002.1 RefSeq gene 37812 38255 . + . ID=gene-CYJ02_RS01255;Name=CYJ02_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01255;old_locus_tag=CYJ02_01255 NZ_PJUQ01000002.1 Protein Homology CDS 37812 38255 . + 0 ID=cds-WP_014614193.1;Parent=gene-CYJ02_RS01255;Dbxref=GenBank:WP_014614193.1;Name=WP_014614193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614193.1;locus_tag=CYJ02_RS01255;product=VOC family protein;protein_id=WP_014614193.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 38380 39684 . - . ID=gene-CYJ02_RS01260;Name=CYJ02_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01260;old_locus_tag=CYJ02_01260 NZ_PJUQ01000002.1 Protein Homology CDS 38380 39684 . - 0 ID=cds-WP_015728986.1;Parent=gene-CYJ02_RS01260;Dbxref=GenBank:WP_015728986.1;Name=WP_015728986.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=CYJ02_RS01260;product=TrkH family potassium uptake protein;protein_id=WP_015728986.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 40071 40142 . - . ID=gene-CYJ02_RS12985;Name=CYJ02_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12985 NZ_PJUQ01000002.1 Protein Homology CDS 40071 40142 . - 0 ID=cds-WP_142302254.1;Parent=gene-CYJ02_RS12985;Dbxref=GenBank:WP_142302254.1;Name=WP_142302254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=CYJ02_RS12985;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_142302254.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 40574 40705 . + . ID=gene-CYJ02_RS01270;Name=CYJ02_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01270;old_locus_tag=CYJ02_01270 NZ_PJUQ01000002.1 Protein Homology CDS 40574 40705 . + 0 ID=cds-WP_014614190.1;Parent=gene-CYJ02_RS01270;Dbxref=GenBank:WP_014614190.1;Name=WP_014614190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=CYJ02_RS01270;product=beta-class phenol-soluble modulin;protein_id=WP_014614190.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 41019 41705 . + . ID=gene-CYJ02_RS01275;Name=CYJ02_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01275;old_locus_tag=CYJ02_01275 NZ_PJUQ01000002.1 Protein Homology CDS 41019 41705 . + 0 ID=cds-WP_101431278.1;Parent=gene-CYJ02_RS01275;Dbxref=GenBank:WP_101431278.1;Name=WP_101431278.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728988.1;locus_tag=CYJ02_RS01275;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_101431278.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 41895 42344 . - . ID=gene-CYJ02_RS01280;Name=CYJ02_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01280;old_locus_tag=CYJ02_01280 NZ_PJUQ01000002.1 Protein Homology CDS 41895 42344 . - 0 ID=cds-WP_014614188.1;Parent=gene-CYJ02_RS01280;Dbxref=GenBank:WP_014614188.1;Name=WP_014614188.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614188.1;locus_tag=CYJ02_RS01280;product=N-acetyltransferase;protein_id=WP_014614188.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 42476 44089 . + . ID=gene-CYJ02_RS01285;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01285;old_locus_tag=CYJ02_01285 NZ_PJUQ01000002.1 Protein Homology CDS 42476 44089 . + 0 ID=cds-WP_065520537.1;Parent=gene-CYJ02_RS01285;Dbxref=GenBank:WP_065520537.1;Name=WP_065520537.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165669.1;locus_tag=CYJ02_RS01285;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_065520537.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 44236 44667 . + . ID=gene-CYJ02_RS01290;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS01290;old_locus_tag=CYJ02_01290 NZ_PJUQ01000002.1 Protein Homology CDS 44236 44667 . + 0 ID=cds-WP_014614186.1;Parent=gene-CYJ02_RS01290;Dbxref=GenBank:WP_014614186.1;Name=WP_014614186.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CYJ02_RS01290;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014614186.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 44685 45620 . + . ID=gene-CYJ02_RS01295;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CYJ02_RS01295;old_locus_tag=CYJ02_01295 NZ_PJUQ01000002.1 Protein Homology CDS 44685 45620 . + 0 ID=cds-WP_063284588.1;Parent=gene-CYJ02_RS01295;Dbxref=GenBank:WP_063284588.1;Name=WP_063284588.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CYJ02_RS01295;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_063284588.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 45639 46025 . + . ID=gene-CYJ02_RS01300;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CYJ02_RS01300;old_locus_tag=CYJ02_01300 NZ_PJUQ01000002.1 Protein Homology CDS 45639 46025 . + 0 ID=cds-WP_014614184.1;Parent=gene-CYJ02_RS01300;Dbxref=GenBank:WP_014614184.1;Name=WP_014614184.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446224.1;locus_tag=CYJ02_RS01300;product=cell division protein FtsL;protein_id=WP_014614184.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 46006 48159 . + . ID=gene-CYJ02_RS01305;Name=CYJ02_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01305;old_locus_tag=CYJ02_01305 NZ_PJUQ01000002.1 Protein Homology CDS 46006 48159 . + 0 ID=cds-WP_096535795.1;Parent=gene-CYJ02_RS01305;Dbxref=GenBank:WP_096535795.1;Name=WP_096535795.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614183.1;locus_tag=CYJ02_RS01305;product=penicillin-binding protein;protein_id=WP_096535795.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 48359 49324 . + . ID=gene-CYJ02_RS01310;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CYJ02_RS01310;old_locus_tag=CYJ02_01310 NZ_PJUQ01000002.1 Protein Homology CDS 48359 49324 . + 0 ID=cds-WP_015728992.1;Parent=gene-CYJ02_RS01310;Dbxref=GenBank:WP_015728992.1;Name=WP_015728992.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276018.1;locus_tag=CYJ02_RS01310;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_015728992.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 49325 50674 . + . ID=gene-CYJ02_RS01315;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01315;old_locus_tag=CYJ02_01315 NZ_PJUQ01000002.1 Protein Homology CDS 49325 50674 . + 0 ID=cds-WP_014614180.1;Parent=gene-CYJ02_RS01315;Dbxref=GenBank:WP_014614180.1;Name=WP_014614180.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=CYJ02_RS01315;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_014614180.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 50690 51580 . + . ID=gene-CYJ02_RS01320;Name=CYJ02_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01320;old_locus_tag=CYJ02_01320 NZ_PJUQ01000002.1 Protein Homology CDS 50690 51580 . + 0 ID=cds-WP_014614179.1;Parent=gene-CYJ02_RS01320;Dbxref=GenBank:WP_014614179.1;Name=WP_014614179.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165664.1;locus_tag=CYJ02_RS01320;product=cell division protein FtsQ/DivIB;protein_id=WP_014614179.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 51796 53196 . + . ID=gene-CYJ02_RS01325;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01325;old_locus_tag=CYJ02_01325 NZ_PJUQ01000002.1 Protein Homology CDS 51796 53196 . + 0 ID=cds-WP_037543248.1;Parent=gene-CYJ02_RS01325;Dbxref=GenBank:WP_037543248.1;Name=WP_037543248.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=CYJ02_RS01325;product=cell division protein FtsA;protein_id=WP_037543248.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 53226 54398 . + . ID=gene-CYJ02_RS01330;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS01330;old_locus_tag=CYJ02_01330 NZ_PJUQ01000002.1 Protein Homology CDS 53226 54398 . + 0 ID=cds-WP_101431279.1;Parent=gene-CYJ02_RS01330;Dbxref=GenBank:WP_101431279.1;Name=WP_101431279.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169110.1;locus_tag=CYJ02_RS01330;product=cell division protein FtsZ;protein_id=WP_101431279.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 54552 55364 . + . ID=gene-CYJ02_RS01335;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=CYJ02_RS01335;old_locus_tag=CYJ02_01335 NZ_PJUQ01000002.1 Protein Homology CDS 54552 55364 . + 0 ID=cds-WP_101431280.1;Parent=gene-CYJ02_RS01335;Dbxref=GenBank:WP_101431280.1;Name=WP_101431280.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=CYJ02_RS01335;product=peptidoglycan editing factor PgeF;protein_id=WP_101431280.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 55365 56039 . + . ID=gene-CYJ02_RS01340;Name=CYJ02_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01340;old_locus_tag=CYJ02_01340 NZ_PJUQ01000002.1 Protein Homology CDS 55365 56039 . + 0 ID=cds-WP_101431281.1;Parent=gene-CYJ02_RS01340;Dbxref=GenBank:WP_101431281.1;Name=WP_101431281.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263997.1;locus_tag=CYJ02_RS01340;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_101431281.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 56045 56605 . + . ID=gene-CYJ02_RS01345;Name=CYJ02_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01345;old_locus_tag=CYJ02_01345 NZ_PJUQ01000002.1 Protein Homology CDS 56045 56605 . + 0 ID=cds-WP_014614174.1;Parent=gene-CYJ02_RS01345;Dbxref=GenBank:WP_014614174.1;Name=WP_014614174.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=CYJ02_RS01345;product=cell division protein SepF;protein_id=WP_014614174.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 56617 56910 . + . ID=gene-CYJ02_RS01350;Name=CYJ02_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01350;old_locus_tag=CYJ02_01350 NZ_PJUQ01000002.1 Protein Homology CDS 56617 56910 . + 0 ID=cds-WP_015728996.1;Parent=gene-CYJ02_RS01350;Dbxref=GenBank:WP_015728996.1;Name=WP_015728996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=CYJ02_RS01350;product=YggT family protein;protein_id=WP_015728996.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 57142 57546 . - . ID=gene-CYJ02_RS01355;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01355;old_locus_tag=CYJ02_01355 NZ_PJUQ01000002.1 Protein Homology CDS 57142 57546 . - 0 ID=cds-WP_015728997.1;Parent=gene-CYJ02_RS01355;Dbxref=GenBank:WP_015728997.1;Name=WP_015728997.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=CYJ02_RS01355;product=D-ribose pyranase;protein_id=WP_015728997.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 57565 58446 . - . ID=gene-CYJ02_RS01360;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=CYJ02_RS01360;old_locus_tag=CYJ02_01360 NZ_PJUQ01000002.1 Protein Homology CDS 57565 58446 . - 0 ID=cds-WP_014614171.1;Parent=gene-CYJ02_RS01360;Dbxref=GenBank:WP_014614171.1;Name=WP_014614171.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CYJ02_RS01360;product=ribose/proton symporter RbsU;protein_id=WP_014614171.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 58803 59630 . + . ID=gene-CYJ02_RS01365;Name=CYJ02_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01365;old_locus_tag=CYJ02_01365 NZ_PJUQ01000002.1 Protein Homology CDS 58803 59630 . + 0 ID=cds-WP_101431282.1;Parent=gene-CYJ02_RS01365;Dbxref=GenBank:WP_101431282.1;Name=WP_101431282.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614170.1;locus_tag=CYJ02_RS01365;product=MurR/RpiR family transcriptional regulator;protein_id=WP_101431282.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 59727 60650 . + . ID=gene-CYJ02_RS01370;Name=CYJ02_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01370;old_locus_tag=CYJ02_01370 NZ_PJUQ01000002.1 Protein Homology CDS 59727 60650 . + 0 ID=cds-WP_063284594.1;Parent=gene-CYJ02_RS01370;Dbxref=GenBank:WP_063284594.1;Name=WP_063284594.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165656.1;locus_tag=CYJ02_RS01370;product=dihydrodipicolinate synthase family protein;protein_id=WP_063284594.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 60678 62219 . + . ID=gene-CYJ02_RS01375;Name=CYJ02_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01375;old_locus_tag=CYJ02_01375 NZ_PJUQ01000002.1 Protein Homology CDS 60678 62219 . + 0 ID=cds-WP_100040311.1;Parent=gene-CYJ02_RS01375;Dbxref=GenBank:WP_100040311.1;Name=WP_100040311.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614168.1;locus_tag=CYJ02_RS01375;product=sodium:solute symporter family protein;protein_id=WP_100040311.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 62238 62687 . + . ID=gene-CYJ02_RS01380;Name=CYJ02_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01380;old_locus_tag=CYJ02_01380 NZ_PJUQ01000002.1 Protein Homology CDS 62238 62687 . + 0 ID=cds-WP_065354404.1;Parent=gene-CYJ02_RS01380;Dbxref=GenBank:WP_065354404.1;Name=WP_065354404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614167.1;locus_tag=CYJ02_RS01380;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_065354404.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 62702 64789 . + . ID=gene-CYJ02_RS01385;Name=CYJ02_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01385;old_locus_tag=CYJ02_01385 NZ_PJUQ01000002.1 Protein Homology CDS 62702 64789 . + 0 ID=cds-WP_099987022.1;Parent=gene-CYJ02_RS01385;Dbxref=GenBank:WP_099987022.1;Name=WP_099987022.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614166.1;locus_tag=CYJ02_RS01385;product=sialidase family protein;protein_id=WP_099987022.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 64805 65920 . + . ID=gene-CYJ02_RS01390;Name=CYJ02_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01390;old_locus_tag=CYJ02_01390 NZ_PJUQ01000002.1 Protein Homology CDS 64805 65920 . + 0 ID=cds-WP_014614165.1;Parent=gene-CYJ02_RS01390;Dbxref=GenBank:WP_014614165.1;Name=WP_014614165.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614165.1;locus_tag=CYJ02_RS01390;product=Gfo/Idh/MocA family protein;protein_id=WP_014614165.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 66190 66960 . + . ID=gene-CYJ02_RS01395;Name=CYJ02_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01395;old_locus_tag=CYJ02_01395 NZ_PJUQ01000002.1 Protein Homology CDS 66190 66960 . + 0 ID=cds-WP_015729001.1;Parent=gene-CYJ02_RS01395;Dbxref=GenBank:WP_015729001.1;Name=WP_015729001.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=CYJ02_RS01395;product=YlmH family RNA-binding protein;protein_id=WP_015729001.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 66984 67583 . + . ID=gene-CYJ02_RS01400;Name=CYJ02_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01400;old_locus_tag=CYJ02_01400 NZ_PJUQ01000002.1 Protein Homology CDS 66984 67583 . + 0 ID=cds-WP_015729002.1;Parent=gene-CYJ02_RS01400;Dbxref=GenBank:WP_015729002.1;Name=WP_015729002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166536.1;locus_tag=CYJ02_RS01400;product=DivIVA domain-containing protein;protein_id=WP_015729002.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 67784 70531 . + . ID=gene-CYJ02_RS01405;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CYJ02_RS01405;old_locus_tag=CYJ02_01405 NZ_PJUQ01000002.1 Protein Homology CDS 67784 70531 . + 0 ID=cds-WP_014614162.1;Parent=gene-CYJ02_RS01405;Dbxref=GenBank:WP_014614162.1;Name=WP_014614162.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=CYJ02_RS01405;product=isoleucine--tRNA ligase;protein_id=WP_014614162.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 70785 71270 . + . ID=gene-CYJ02_RS01410;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01410;old_locus_tag=CYJ02_01410 NZ_PJUQ01000002.1 Protein Homology CDS 70785 71270 . + 0 ID=cds-WP_014614161.1;Parent=gene-CYJ02_RS01410;Dbxref=GenBank:WP_014614161.1;Name=WP_014614161.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=CYJ02_RS01410;product=signal peptidase II;protein_id=WP_014614161.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 71270 72187 . + . ID=gene-CYJ02_RS01415;Name=CYJ02_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01415;old_locus_tag=CYJ02_01415 NZ_PJUQ01000002.1 Protein Homology CDS 71270 72187 . + 0 ID=cds-WP_015729003.1;Parent=gene-CYJ02_RS01415;Dbxref=GenBank:WP_015729003.1;Name=WP_015729003.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614160.1;locus_tag=CYJ02_RS01415;product=RluA family pseudouridine synthase;protein_id=WP_015729003.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 72473 72997 . + . ID=gene-CYJ02_RS01420;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=CYJ02_RS01420;old_locus_tag=CYJ02_01420 NZ_PJUQ01000002.1 Protein Homology CDS 72473 72997 . + 0 ID=cds-WP_014614159.1;Parent=gene-CYJ02_RS01420;Dbxref=GenBank:WP_014614159.1;Name=WP_014614159.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830167.1;locus_tag=CYJ02_RS01420;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_014614159.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 73175 74467 . + . ID=gene-CYJ02_RS01425;Name=CYJ02_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01425;old_locus_tag=CYJ02_01425 NZ_PJUQ01000002.1 Protein Homology CDS 73175 74467 . + 0 ID=cds-WP_014614158.1;Parent=gene-CYJ02_RS01425;Dbxref=GenBank:WP_014614158.1;Name=WP_014614158.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165552.1;locus_tag=CYJ02_RS01425;product=uracil-xanthine permease family protein;protein_id=WP_014614158.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 74489 75367 . + . ID=gene-CYJ02_RS01430;Name=CYJ02_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01430;old_locus_tag=CYJ02_01430 NZ_PJUQ01000002.1 Protein Homology CDS 74489 75367 . + 0 ID=cds-WP_014614157.1;Parent=gene-CYJ02_RS01430;Dbxref=GenBank:WP_014614157.1;Name=WP_014614157.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614157.1;locus_tag=CYJ02_RS01430;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014614157.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 75383 76657 . + . ID=gene-CYJ02_RS01435;Name=CYJ02_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01435;old_locus_tag=CYJ02_01435 NZ_PJUQ01000002.1 Protein Homology CDS 75383 76657 . + 0 ID=cds-WP_037544242.1;Parent=gene-CYJ02_RS01435;Dbxref=GenBank:WP_037544242.1;Name=WP_037544242.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=CYJ02_RS01435;product=dihydroorotase;protein_id=WP_037544242.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 76660 77760 . + . ID=gene-CYJ02_RS01440;Name=CYJ02_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01440;old_locus_tag=CYJ02_01440 NZ_PJUQ01000002.1 Protein Homology CDS 76660 77760 . + 0 ID=cds-WP_014614155.1;Parent=gene-CYJ02_RS01440;Dbxref=GenBank:WP_014614155.1;Name=WP_014614155.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=CYJ02_RS01440;product=carbamoyl phosphate synthase small subunit;protein_id=WP_014614155.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 77753 80926 . + . ID=gene-CYJ02_RS01445;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01445;old_locus_tag=CYJ02_01445 NZ_PJUQ01000002.1 Protein Homology CDS 77753 80926 . + 0 ID=cds-WP_014614154.1;Parent=gene-CYJ02_RS01445;Dbxref=GenBank:WP_014614154.1;Name=WP_014614154.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=CYJ02_RS01445;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_014614154.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 80940 81704 . + . ID=gene-CYJ02_RS01450;Name=CYJ02_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01450;old_locus_tag=CYJ02_01450 NZ_PJUQ01000002.1 Protein Homology CDS 80940 81704 . + 0 ID=cds-WP_014614153.1;Parent=gene-CYJ02_RS01450;Dbxref=GenBank:WP_014614153.1;Name=WP_014614153.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=CYJ02_RS01450;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_014614153.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 81701 82621 . + . ID=gene-CYJ02_RS01455;Name=CYJ02_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01455;old_locus_tag=CYJ02_01455 NZ_PJUQ01000002.1 Protein Homology CDS 81701 82621 . + 0 ID=cds-WP_014614152.1;Parent=gene-CYJ02_RS01455;Dbxref=GenBank:WP_014614152.1;Name=WP_014614152.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=CYJ02_RS01455;product=dihydroorotate dehydrogenase;protein_id=WP_014614152.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 82623 83327 . + . ID=gene-CYJ02_RS01460;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CYJ02_RS01460;old_locus_tag=CYJ02_01460 NZ_PJUQ01000002.1 Protein Homology CDS 82623 83327 . + 0 ID=cds-WP_101431283.1;Parent=gene-CYJ02_RS01460;Dbxref=GenBank:WP_101431283.1;Name=WP_101431283.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614151.1;locus_tag=CYJ02_RS01460;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_101431283.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 83315 83923 . + . ID=gene-CYJ02_RS01465;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CYJ02_RS01465;old_locus_tag=CYJ02_01465 NZ_PJUQ01000002.1 Protein Homology CDS 83315 83923 . + 0 ID=cds-WP_015729005.1;Parent=gene-CYJ02_RS01465;Dbxref=GenBank:WP_015729005.1;Name=WP_015729005.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=CYJ02_RS01465;product=orotate phosphoribosyltransferase;protein_id=WP_015729005.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 84358 84771 . + . ID=gene-CYJ02_RS01470;Name=CYJ02_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01470;old_locus_tag=CYJ02_01470 NZ_PJUQ01000002.1 Protein Homology CDS 84358 84771 . + 0 ID=cds-WP_014614149.1;Parent=gene-CYJ02_RS01470;Dbxref=GenBank:WP_014614149.1;Name=WP_014614149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=CYJ02_RS01470;product=VOC family protein;protein_id=WP_014614149.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 84855 86558 . - . ID=gene-CYJ02_RS01475;Name=CYJ02_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01475;old_locus_tag=CYJ02_01475 NZ_PJUQ01000002.1 Protein Homology CDS 84855 86558 . - 0 ID=cds-WP_101431284.1;Parent=gene-CYJ02_RS01475;Dbxref=GenBank:WP_101431284.1;Name=WP_101431284.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729006.1;locus_tag=CYJ02_RS01475;product=Rqc2 family fibronectin-binding protein;protein_id=WP_101431284.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 86718 87341 . + . ID=gene-CYJ02_RS01480;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CYJ02_RS01480;old_locus_tag=CYJ02_01480 NZ_PJUQ01000002.1 Protein Homology CDS 86718 87341 . + 0 ID=cds-WP_014614147.1;Parent=gene-CYJ02_RS01480;Dbxref=GenBank:WP_014614147.1;Name=WP_014614147.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=CYJ02_RS01480;product=guanylate kinase;protein_id=WP_014614147.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 87341 87550 . + . ID=gene-CYJ02_RS01485;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS01485;old_locus_tag=CYJ02_01485 NZ_PJUQ01000002.1 Protein Homology CDS 87341 87550 . + 0 ID=cds-WP_014614146.1;Parent=gene-CYJ02_RS01485;Dbxref=GenBank:WP_014614146.1;Name=WP_014614146.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=CYJ02_RS01485;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_014614146.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 87855 89060 . + . ID=gene-CYJ02_RS01490;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01490;old_locus_tag=CYJ02_01490 NZ_PJUQ01000002.1 Protein Homology CDS 87855 89060 . + 0 ID=cds-WP_041613233.1;Parent=gene-CYJ02_RS01490;Dbxref=GenBank:WP_041613233.1;Name=WP_041613233.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167385.1;locus_tag=CYJ02_RS01490;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_041613233.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 89057 91465 . + . ID=gene-CYJ02_RS01495;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01495;old_locus_tag=CYJ02_01495 NZ_PJUQ01000002.1 Protein Homology CDS 89057 91465 . + 0 ID=cds-WP_014614144.1;Parent=gene-CYJ02_RS01495;Dbxref=GenBank:WP_014614144.1;Name=WP_014614144.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560866.1;locus_tag=CYJ02_RS01495;product=primosomal protein N';protein_id=WP_014614144.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 91722 92207 . + . ID=gene-CYJ02_RS01500;Name=CYJ02_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01500;old_locus_tag=CYJ02_01500 NZ_PJUQ01000002.1 Protein Homology CDS 91722 92207 . + 0 ID=cds-WP_014614143.1;Parent=gene-CYJ02_RS01500;Dbxref=GenBank:WP_014614143.1;Name=WP_014614143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614143.1;locus_tag=CYJ02_RS01500;product=peptide deformylase;protein_id=WP_014614143.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 92200 93132 . + . ID=gene-CYJ02_RS01505;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CYJ02_RS01505;old_locus_tag=CYJ02_01505 NZ_PJUQ01000002.1 Protein Homology CDS 92200 93132 . + 0 ID=cds-WP_065354398.1;Parent=gene-CYJ02_RS01505;Dbxref=GenBank:WP_065354398.1;Name=WP_065354398.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=CYJ02_RS01505;product=methionyl-tRNA formyltransferase;protein_id=WP_065354398.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 93133 94434 . + . ID=gene-CYJ02_RS01510;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01510;old_locus_tag=CYJ02_01510 NZ_PJUQ01000002.1 Protein Homology CDS 93133 94434 . + 0 ID=cds-WP_101431285.1;Parent=gene-CYJ02_RS01510;Dbxref=GenBank:WP_101431285.1;Name=WP_101431285.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614141.1;locus_tag=CYJ02_RS01510;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_101431285.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 94440 95534 . + . ID=gene-CYJ02_RS01515;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=CYJ02_RS01515;old_locus_tag=CYJ02_01515 NZ_PJUQ01000002.1 Protein Homology CDS 94440 95534 . + 0 ID=cds-WP_014614140.1;Parent=gene-CYJ02_RS01515;Dbxref=GenBank:WP_014614140.1;Name=WP_014614140.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CYJ02_RS01515;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_014614140.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 95541 96284 . + . ID=gene-CYJ02_RS01520;Name=CYJ02_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01520;old_locus_tag=CYJ02_01520 NZ_PJUQ01000002.1 Protein Homology CDS 95541 96284 . + 0 ID=cds-WP_014614139.1;Parent=gene-CYJ02_RS01520;Dbxref=GenBank:WP_014614139.1;Name=WP_014614139.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=CYJ02_RS01520;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_014614139.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 96281 98287 . + . ID=gene-CYJ02_RS01525;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01525;old_locus_tag=CYJ02_01525 NZ_PJUQ01000002.1 Protein Homology CDS 96281 98287 . + 0 ID=cds-WP_101431286.1;Parent=gene-CYJ02_RS01525;Dbxref=GenBank:WP_101431286.1;Name=WP_101431286.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729014.1;locus_tag=CYJ02_RS01525;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_101431286.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 99046 100314 . + . ID=gene-CYJ02_RS01530;Name=CYJ02_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01530;old_locus_tag=CYJ02_01530 NZ_PJUQ01000002.1 Protein Homology CDS 99046 100314 . + 0 ID=cds-WP_101431287.1;Parent=gene-CYJ02_RS01530;Dbxref=GenBank:WP_101431287.1;Name=WP_101431287.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614137.1;locus_tag=CYJ02_RS01530;product=cytochrome P450;protein_id=WP_101431287.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 100496 101371 . + . ID=gene-CYJ02_RS01535;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01535;old_locus_tag=CYJ02_01535 NZ_PJUQ01000002.1 Protein Homology CDS 100496 101371 . + 0 ID=cds-WP_101431288.1;Parent=gene-CYJ02_RS01535;Dbxref=GenBank:WP_101431288.1;Name=WP_101431288.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=CYJ02_RS01535;product=ribosome small subunit-dependent GTPase A;protein_id=WP_101431288.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 101371 102021 . + . ID=gene-CYJ02_RS01540;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CYJ02_RS01540;old_locus_tag=CYJ02_01540 NZ_PJUQ01000002.1 Protein Homology CDS 101371 102021 . + 0 ID=cds-WP_101431289.1;Parent=gene-CYJ02_RS01540;Dbxref=GenBank:WP_101431289.1;Name=WP_101431289.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=CYJ02_RS01540;product=ribulose-phosphate 3-epimerase;protein_id=WP_101431289.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 102021 102662 . + . ID=gene-CYJ02_RS01545;Name=CYJ02_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01545;old_locus_tag=CYJ02_01545 NZ_PJUQ01000002.1 Protein Homology CDS 102021 102662 . + 0 ID=cds-WP_101431290.1;Parent=gene-CYJ02_RS01545;Dbxref=GenBank:WP_101431290.1;Name=WP_101431290.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614134.1;locus_tag=CYJ02_RS01545;product=thiamine diphosphokinase;protein_id=WP_101431290.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 102733 102921 . - . ID=gene-CYJ02_RS01550;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01550;old_locus_tag=CYJ02_01550 NZ_PJUQ01000002.1 Protein Homology CDS 102733 102921 . - 0 ID=cds-WP_014614133.1;Parent=gene-CYJ02_RS01550;Dbxref=GenBank:WP_014614133.1;Name=WP_014614133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CYJ02_RS01550;product=50S ribosomal protein L28;protein_id=WP_014614133.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 103253 103627 . + . ID=gene-CYJ02_RS01555;Name=CYJ02_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01555;old_locus_tag=CYJ02_01555 NZ_PJUQ01000002.1 Protein Homology CDS 103253 103627 . + 0 ID=cds-WP_014614132.1;Parent=gene-CYJ02_RS01555;Dbxref=GenBank:WP_014614132.1;Name=WP_014614132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=CYJ02_RS01555;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014614132.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 103640 105304 . + . ID=gene-CYJ02_RS01560;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01560;old_locus_tag=CYJ02_01560 NZ_PJUQ01000002.1 Protein Homology CDS 103640 105304 . + 0 ID=cds-WP_101431291.1;Parent=gene-CYJ02_RS01560;Dbxref=GenBank:WP_101431291.1;Name=WP_101431291.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303292.1;locus_tag=CYJ02_RS01560;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_101431291.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 106286 106951 . + . ID=gene-CYJ02_RS01565;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01565;old_locus_tag=CYJ02_01565 NZ_PJUQ01000002.1 Protein Homology CDS 106286 106951 . + 0 ID=cds-WP_014614130.1;Parent=gene-CYJ02_RS01565;Dbxref=GenBank:WP_014614130.1;Name=WP_014614130.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614130.1;locus_tag=CYJ02_RS01565;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_014614130.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 106970 107839 . + . ID=gene-CYJ02_RS01570;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01570;old_locus_tag=CYJ02_01570 NZ_PJUQ01000002.1 Protein Homology CDS 106970 107839 . + 0 ID=cds-WP_031254141.1;Parent=gene-CYJ02_RS01570;Dbxref=GenBank:WP_031254141.1;Name=WP_031254141.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=CYJ02_RS01570;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_031254141.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 107842 109887 . + . ID=gene-CYJ02_RS01575;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CYJ02_RS01575;old_locus_tag=CYJ02_01575 NZ_PJUQ01000002.1 Protein Homology CDS 107842 109887 . + 0 ID=cds-WP_101431292.1;Parent=gene-CYJ02_RS01575;Dbxref=GenBank:WP_101431292.1;Name=WP_101431292.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CYJ02_RS01575;product=ATP-dependent DNA helicase RecG;protein_id=WP_101431292.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 110014 110574 . + . ID=gene-CYJ02_RS01580;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=CYJ02_RS01580;old_locus_tag=CYJ02_01580 NZ_PJUQ01000002.1 Protein Homology CDS 110014 110574 . + 0 ID=cds-WP_026066989.1;Parent=gene-CYJ02_RS01580;Dbxref=GenBank:WP_026066989.1;Name=WP_026066989.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275971.1;locus_tag=CYJ02_RS01580;product=transcription factor FapR;protein_id=WP_026066989.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 110576 111562 . + . ID=gene-CYJ02_RS01585;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CYJ02_RS01585;old_locus_tag=CYJ02_01585 NZ_PJUQ01000002.1 Protein Homology CDS 110576 111562 . + 0 ID=cds-WP_015729017.1;Parent=gene-CYJ02_RS01585;Dbxref=GenBank:WP_015729017.1;Name=WP_015729017.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729017.1;locus_tag=CYJ02_RS01585;product=phosphate acyltransferase PlsX;protein_id=WP_015729017.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 111555 112481 . + . ID=gene-CYJ02_RS01590;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01590;old_locus_tag=CYJ02_01590 NZ_PJUQ01000002.1 Protein Homology CDS 111555 112481 . + 0 ID=cds-WP_101431293.1;Parent=gene-CYJ02_RS01590;Dbxref=GenBank:WP_101431293.1;Name=WP_101431293.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614125.1;locus_tag=CYJ02_RS01590;product=ACP S-malonyltransferase;protein_id=WP_101431293.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 112474 113211 . + . ID=gene-CYJ02_RS01595;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CYJ02_RS01595;old_locus_tag=CYJ02_01595 NZ_PJUQ01000002.1 Protein Homology CDS 112474 113211 . + 0 ID=cds-WP_014614124.1;Parent=gene-CYJ02_RS01595;Dbxref=GenBank:WP_014614124.1;Name=WP_014614124.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=CYJ02_RS01595;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_014614124.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 113440 113673 . + . ID=gene-CYJ02_RS01600;Name=CYJ02_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01600;old_locus_tag=CYJ02_01600 NZ_PJUQ01000002.1 Protein Homology CDS 113440 113673 . + 0 ID=cds-WP_014614123.1;Parent=gene-CYJ02_RS01600;Dbxref=GenBank:WP_014614123.1;Name=WP_014614123.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CYJ02_RS01600;product=acyl carrier protein;protein_id=WP_014614123.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 114567 115298 . + . ID=gene-CYJ02_RS01605;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CYJ02_RS01605;old_locus_tag=CYJ02_01605 NZ_PJUQ01000002.1 Protein Homology CDS 114567 115298 . + 0 ID=cds-WP_014614122.1;Parent=gene-CYJ02_RS01605;Dbxref=GenBank:WP_014614122.1;Name=WP_014614122.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165652.1;locus_tag=CYJ02_RS01605;product=ribonuclease III;protein_id=WP_014614122.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 115302 118874 . + . ID=gene-CYJ02_RS01610;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CYJ02_RS01610;old_locus_tag=CYJ02_01610 NZ_PJUQ01000002.1 Protein Homology CDS 115302 118874 . + 0 ID=cds-WP_101431294.1;Parent=gene-CYJ02_RS01610;Dbxref=GenBank:WP_101431294.1;Name=WP_101431294.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=CYJ02_RS01610;product=chromosome segregation protein SMC;protein_id=WP_101431294.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 118876 120075 . + . ID=gene-CYJ02_RS01615;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CYJ02_RS01615;old_locus_tag=CYJ02_01615 NZ_PJUQ01000002.1 Protein Homology CDS 118876 120075 . + 0 ID=cds-WP_101431295.1;Parent=gene-CYJ02_RS01615;Dbxref=GenBank:WP_101431295.1;Name=WP_101431295.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614120.1;locus_tag=CYJ02_RS01615;product=signal recognition particle-docking protein FtsY;protein_id=WP_101431295.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 120079 120414 . + . ID=gene-CYJ02_RS01620;Name=CYJ02_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01620;old_locus_tag=CYJ02_01620 NZ_PJUQ01000002.1 Protein Homology CDS 120079 120414 . + 0 ID=cds-WP_014614119.1;Parent=gene-CYJ02_RS01620;Dbxref=GenBank:WP_014614119.1;Name=WP_014614119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614119.1;locus_tag=CYJ02_RS01620;product=putative DNA-binding protein;protein_id=WP_014614119.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 120428 121795 . + . ID=gene-CYJ02_RS01625;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CYJ02_RS01625;old_locus_tag=CYJ02_01625 NZ_PJUQ01000002.1 Protein Homology CDS 120428 121795 . + 0 ID=cds-WP_015729019.1;Parent=gene-CYJ02_RS01625;Dbxref=GenBank:WP_015729019.1;Name=WP_015729019.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CYJ02_RS01625;product=signal recognition particle protein;protein_id=WP_015729019.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq pseudogene 122708 123262 . - . ID=gene-CYJ02_RS12990;Name=CYJ02_RS12990;end_range=123262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12990;old_locus_tag=CYJ02_01630;partial=true;pseudo=true;start_range=.,122708 NZ_PJUQ01000002.1 Protein Homology CDS 122708 123262 . - 0 ID=cds-CYJ02_RS12990;Parent=gene-CYJ02_RS12990;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=123262,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_373895778.1;locus_tag=CYJ02_RS12990;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,122708;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 123712 123915 . + . ID=gene-CYJ02_RS12485;Name=CYJ02_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12485 NZ_PJUQ01000002.1 GeneMarkS-2+ CDS 123712 123915 . + 0 ID=cds-WP_178386885.1;Parent=gene-CYJ02_RS12485;Dbxref=GenBank:WP_178386885.1;Name=WP_178386885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12485;product=hypothetical protein;protein_id=WP_178386885.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 123987 124622 . + . ID=gene-CYJ02_RS01645;Name=CYJ02_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01645;old_locus_tag=CYJ02_01645 NZ_PJUQ01000002.1 Protein Homology CDS 123987 124622 . + 0 ID=cds-WP_241901295.1;Parent=gene-CYJ02_RS01645;Dbxref=GenBank:WP_241901295.1;Name=WP_241901295.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=CYJ02_RS01645;product=DMT family transporter;protein_id=WP_241901295.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 124716 124919 . + . ID=gene-CYJ02_RS12660;Name=CYJ02_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12660 NZ_PJUQ01000002.1 GeneMarkS-2+ CDS 124716 124919 . + 0 ID=cds-WP_014612750.1;Parent=gene-CYJ02_RS12660;Dbxref=GenBank:WP_014612750.1;Name=WP_014612750.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12660;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_014612750.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 125016 125768 . - . ID=gene-CYJ02_RS01650;Name=CYJ02_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01650;old_locus_tag=CYJ02_01650 NZ_PJUQ01000002.1 Protein Homology CDS 125016 125768 . - 0 ID=cds-WP_015729776.1;Parent=gene-CYJ02_RS01650;Dbxref=GenBank:WP_015729776.1;Name=WP_015729776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729776.1;locus_tag=CYJ02_RS01650;product=amino acid transporter;protein_id=WP_015729776.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 125770 126657 . - . ID=gene-CYJ02_RS01655;Name=CYJ02_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01655;old_locus_tag=CYJ02_01655 NZ_PJUQ01000002.1 Protein Homology CDS 125770 126657 . - 0 ID=cds-WP_015729775.1;Parent=gene-CYJ02_RS01655;Dbxref=GenBank:WP_015729775.1;Name=WP_015729775.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612752.1;locus_tag=CYJ02_RS01655;product=ABC transporter ATP-binding protein;protein_id=WP_015729775.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 126641 127081 . - . ID=gene-CYJ02_RS12995;Name=CYJ02_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12995;old_locus_tag=CYJ02_01660 NZ_PJUQ01000002.1 Protein Homology CDS 126641 127081 . - 0 ID=cds-WP_366914031.1;Parent=gene-CYJ02_RS12995;Dbxref=GenBank:WP_366914031.1;Name=WP_366914031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038270.1;locus_tag=CYJ02_RS12995;product=Msa family membrane protein;protein_id=WP_366914031.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 127099 127599 . - . ID=gene-CYJ02_RS13000;Name=CYJ02_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13000;old_locus_tag=CYJ02_01665 NZ_PJUQ01000002.1 Protein Homology CDS 127099 127599 . - 0 ID=cds-WP_080552901.1;Parent=gene-CYJ02_RS13000;Dbxref=GenBank:WP_080552901.1;Name=WP_080552901.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=CYJ02_RS13000;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_080552901.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 128472 133172 . - . ID=gene-CYJ02_RS01670;Name=spsG;gbkey=Gene;gene=spsG;gene_biotype=protein_coding;locus_tag=CYJ02_RS01670;old_locus_tag=CYJ02_01670 NZ_PJUQ01000002.1 Protein Homology CDS 128472 133172 . - 0 ID=cds-WP_101431297.1;Parent=gene-CYJ02_RS01670;Dbxref=GenBank:WP_101431297.1;Name=WP_101431297.1;gbkey=CDS;gene=spsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612754.1;locus_tag=CYJ02_RS01670;product=LPXTG-anchored putative endo-alpha-N-acetylgalactosaminidase SpsG;protein_id=WP_101431297.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 133610 134320 . + . ID=gene-CYJ02_RS01675;Name=CYJ02_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01675;old_locus_tag=CYJ02_01675 NZ_PJUQ01000002.1 Protein Homology CDS 133610 134320 . + 0 ID=cds-WP_014612756.1;Parent=gene-CYJ02_RS01675;Dbxref=GenBank:WP_014612756.1;Name=WP_014612756.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612756.1;locus_tag=CYJ02_RS01675;product=GntR family transcriptional regulator;protein_id=WP_014612756.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 134349 135464 . + . ID=gene-CYJ02_RS01680;Name=CYJ02_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01680;old_locus_tag=CYJ02_01680 NZ_PJUQ01000002.1 Protein Homology CDS 134349 135464 . + 0 ID=cds-WP_065353941.1;Parent=gene-CYJ02_RS01680;Dbxref=GenBank:WP_065353941.1;Name=WP_065353941.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166802.1;locus_tag=CYJ02_RS01680;product=SIS domain-containing protein;protein_id=WP_065353941.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 135471 136409 . + . ID=gene-CYJ02_RS01685;Name=CYJ02_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01685;old_locus_tag=CYJ02_01685 NZ_PJUQ01000002.1 Protein Homology CDS 135471 136409 . + 0 ID=cds-WP_014612758.1;Parent=gene-CYJ02_RS01685;Dbxref=GenBank:WP_014612758.1;Name=WP_014612758.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168840.1;locus_tag=CYJ02_RS01685;product=1-phosphofructokinase family hexose kinase;protein_id=WP_014612758.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 136403 137344 . + . ID=gene-CYJ02_RS01690;Name=CYJ02_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01690;old_locus_tag=CYJ02_01690 NZ_PJUQ01000002.1 Protein Homology CDS 136403 137344 . + 0 ID=cds-WP_014612759.1;Parent=gene-CYJ02_RS01690;Dbxref=GenBank:WP_014612759.1;Name=WP_014612759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612759.1;locus_tag=CYJ02_RS01690;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_014612759.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 137357 139129 . + . ID=gene-CYJ02_RS01695;Name=CYJ02_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01695;old_locus_tag=CYJ02_01695 NZ_PJUQ01000002.1 Protein Homology CDS 137357 139129 . + 0 ID=cds-WP_101431298.1;Parent=gene-CYJ02_RS01695;Dbxref=GenBank:WP_101431298.1;Name=WP_101431298.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166805.1;locus_tag=CYJ02_RS01695;product=glycoside hydrolase family 35 protein;protein_id=WP_101431298.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 139144 139623 . + . ID=gene-CYJ02_RS01700;Name=CYJ02_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01700;old_locus_tag=CYJ02_01700 NZ_PJUQ01000002.1 Protein Homology CDS 139144 139623 . + 0 ID=cds-WP_014612761.1;Parent=gene-CYJ02_RS01700;Dbxref=GenBank:WP_014612761.1;Name=WP_014612761.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=CYJ02_RS01700;product=PTS sugar transporter subunit IIB;protein_id=WP_014612761.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 139645 140544 . + . ID=gene-CYJ02_RS01705;Name=CYJ02_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01705;old_locus_tag=CYJ02_01705 NZ_PJUQ01000002.1 Protein Homology CDS 139645 140544 . + 0 ID=cds-WP_014612762.1;Parent=gene-CYJ02_RS01705;Dbxref=GenBank:WP_014612762.1;Name=WP_014612762.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=CYJ02_RS01705;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_014612762.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 140531 141415 . + . ID=gene-CYJ02_RS01710;Name=CYJ02_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01710;old_locus_tag=CYJ02_01710 NZ_PJUQ01000002.1 Protein Homology CDS 140531 141415 . + 0 ID=cds-WP_014612763.1;Parent=gene-CYJ02_RS01710;Dbxref=GenBank:WP_014612763.1;Name=WP_014612763.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=CYJ02_RS01710;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014612763.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 141437 141838 . + . ID=gene-CYJ02_RS01715;Name=CYJ02_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01715;old_locus_tag=CYJ02_01715 NZ_PJUQ01000002.1 Protein Homology CDS 141437 141838 . + 0 ID=cds-WP_014612764.1;Parent=gene-CYJ02_RS01715;Dbxref=GenBank:WP_014612764.1;Name=WP_014612764.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612764.1;locus_tag=CYJ02_RS01715;product=PTS sugar transporter subunit IIA;protein_id=WP_014612764.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 141870 143024 . + . ID=gene-CYJ02_RS01720;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01720;old_locus_tag=CYJ02_01720 NZ_PJUQ01000002.1 Protein Homology CDS 141870 143024 . + 0 ID=cds-WP_063284828.1;Parent=gene-CYJ02_RS01720;Dbxref=GenBank:WP_063284828.1;Name=WP_063284828.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612765.1;locus_tag=CYJ02_RS01720;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_063284828.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 143211 143726 . - . ID=gene-CYJ02_RS01725;Name=CYJ02_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01725;old_locus_tag=CYJ02_01725 NZ_PJUQ01000002.1 Protein Homology CDS 143211 143726 . - 0 ID=cds-WP_014612766.1;Parent=gene-CYJ02_RS01725;Dbxref=GenBank:WP_014612766.1;Name=WP_014612766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446907.1;locus_tag=CYJ02_RS01725;product=YceI family protein;protein_id=WP_014612766.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 144126 146186 . + . ID=gene-CYJ02_RS01730;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ02_RS01730;old_locus_tag=CYJ02_01730 NZ_PJUQ01000002.1 Protein Homology CDS 144126 146186 . + 0 ID=cds-WP_096538175.1;Parent=gene-CYJ02_RS01730;Dbxref=GenBank:WP_096538175.1;Name=WP_096538175.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166817.1;locus_tag=CYJ02_RS01730;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_096538175.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 146627 147559 . + . ID=gene-CYJ02_RS01735;Name=CYJ02_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01735;old_locus_tag=CYJ02_01735 NZ_PJUQ01000002.1 Protein Homology CDS 146627 147559 . + 0 ID=cds-WP_014612768.1;Parent=gene-CYJ02_RS01735;Dbxref=GenBank:WP_014612768.1;Name=WP_014612768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612768.1;locus_tag=CYJ02_RS01735;product=lactate/malate family dehydrogenase;protein_id=WP_014612768.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 147594 148952 . + . ID=gene-CYJ02_RS01740;Name=CYJ02_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01740;old_locus_tag=CYJ02_01740 NZ_PJUQ01000002.1 Protein Homology CDS 147594 148952 . + 0 ID=cds-WP_174235134.1;Parent=gene-CYJ02_RS01740;Dbxref=GenBank:WP_174235134.1;Name=WP_174235134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166820.1;locus_tag=CYJ02_RS01740;product=YjiH family protein;protein_id=WP_174235134.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 148983 149750 . + . ID=gene-CYJ02_RS01745;Name=CYJ02_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01745;old_locus_tag=CYJ02_01745 NZ_PJUQ01000002.1 Protein Homology CDS 148983 149750 . + 0 ID=cds-WP_015729773.1;Parent=gene-CYJ02_RS01745;Dbxref=GenBank:WP_015729773.1;Name=WP_015729773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612770.1;locus_tag=CYJ02_RS01745;product=IclR family transcriptional regulator;protein_id=WP_015729773.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 150012 150215 . + . ID=gene-CYJ02_RS01750;Name=CYJ02_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01750;old_locus_tag=CYJ02_01750 NZ_PJUQ01000002.1 Protein Homology CDS 150012 150215 . + 0 ID=cds-WP_014612771.1;Parent=gene-CYJ02_RS01750;Dbxref=GenBank:WP_014612771.1;Name=WP_014612771.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=CYJ02_RS01750;product=helix-turn-helix transcriptional regulator;protein_id=WP_014612771.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq pseudogene 150212 150936 . + . ID=gene-CYJ02_RS13160;Name=CYJ02_RS13160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13160;old_locus_tag=CYJ02_01755;pseudo=true NZ_PJUQ01000002.1 Protein Homology CDS 150212 150936 . + 0 ID=cds-CYJ02_RS13160;Parent=gene-CYJ02_RS13160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=CYJ02_RS13160;product=DUF3169 family protein;pseudo=true;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 151066 152109 . - . ID=gene-CYJ02_RS01760;Name=CYJ02_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01760;old_locus_tag=CYJ02_01760 NZ_PJUQ01000002.1 Protein Homology CDS 151066 152109 . - 0 ID=cds-WP_014612773.1;Parent=gene-CYJ02_RS01760;Dbxref=GenBank:WP_014612773.1;Name=WP_014612773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166823.1;locus_tag=CYJ02_RS01760;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014612773.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 152501 153259 . + . ID=gene-CYJ02_RS01765;Name=CYJ02_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01765;old_locus_tag=CYJ02_01765 NZ_PJUQ01000002.1 Protein Homology CDS 152501 153259 . + 0 ID=cds-WP_063278669.1;Parent=gene-CYJ02_RS01765;Dbxref=GenBank:WP_063278669.1;Name=WP_063278669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729770.1;locus_tag=CYJ02_RS01765;product=spr1630 family ClpXP-sensitive toxin;protein_id=WP_063278669.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 153281 154468 . + . ID=gene-CYJ02_RS01770;Name=CYJ02_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01770;old_locus_tag=CYJ02_01770 NZ_PJUQ01000002.1 Protein Homology CDS 153281 154468 . + 0 ID=cds-WP_101431299.1;Parent=gene-CYJ02_RS01770;Dbxref=GenBank:WP_101431299.1;Name=WP_101431299.1;Ontology_term=GO:0001217;gbkey=CDS;go_function=DNA-binding transcription repressor activity|0001217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612775.1;locus_tag=CYJ02_RS01770;product=spr1629 family repressor/antitoxin;protein_id=WP_101431299.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 154564 156168 . - . ID=gene-CYJ02_RS01775;Name=CYJ02_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01775;old_locus_tag=CYJ02_01775 NZ_PJUQ01000002.1 Protein Homology CDS 154564 156168 . - 0 ID=cds-WP_015729768.1;Parent=gene-CYJ02_RS01775;Dbxref=GenBank:WP_015729768.1;Name=WP_015729768.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612776.1;locus_tag=CYJ02_RS01775;product=L-lactate permease;protein_id=WP_015729768.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 156636 157313 . + . ID=gene-CYJ02_RS01780;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01780;old_locus_tag=CYJ02_01780 NZ_PJUQ01000002.1 Protein Homology CDS 156636 157313 . + 0 ID=cds-WP_101431300.1;Parent=gene-CYJ02_RS01780;Dbxref=GenBank:WP_101431300.1;Name=WP_101431300.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=CYJ02_RS01780;product=dethiobiotin synthase;protein_id=WP_101431300.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 157303 158655 . + . ID=gene-CYJ02_RS01785;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01785;old_locus_tag=CYJ02_01785 NZ_PJUQ01000002.1 Protein Homology CDS 157303 158655 . + 0 ID=cds-WP_101431301.1;Parent=gene-CYJ02_RS01785;Dbxref=GenBank:WP_101431301.1;Name=WP_101431301.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=CYJ02_RS01785;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_101431301.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 158658 159779 . + . ID=gene-CYJ02_RS01790;Name=CYJ02_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01790;old_locus_tag=CYJ02_01790 NZ_PJUQ01000002.1 Protein Homology CDS 158658 159779 . + 0 ID=cds-WP_101431302.1;Parent=gene-CYJ02_RS01790;Dbxref=GenBank:WP_101431302.1;Name=WP_101431302.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729765.1;locus_tag=CYJ02_RS01790;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101431302.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 159782 160474 . + . ID=gene-CYJ02_RS01795;Name=CYJ02_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01795;old_locus_tag=CYJ02_01795 NZ_PJUQ01000002.1 Protein Homology CDS 159782 160474 . + 0 ID=cds-WP_065353948.1;Parent=gene-CYJ02_RS01795;Dbxref=GenBank:WP_065353948.1;Name=WP_065353948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612780.1;locus_tag=CYJ02_RS01795;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_065353948.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 160742 161776 . + . ID=gene-CYJ02_RS01800;Name=CYJ02_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01800;old_locus_tag=CYJ02_01800 NZ_PJUQ01000002.1 Protein Homology CDS 160742 161776 . + 0 ID=cds-WP_037542095.1;Parent=gene-CYJ02_RS01800;Dbxref=GenBank:WP_037542095.1;Name=WP_037542095.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166830.1;locus_tag=CYJ02_RS01800;product=family 20 glycosylhydrolase;protein_id=WP_037542095.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 161773 162831 . - . ID=gene-CYJ02_RS01805;Name=icaC;gbkey=Gene;gene=icaC;gene_biotype=protein_coding;locus_tag=CYJ02_RS01805;old_locus_tag=CYJ02_01805 NZ_PJUQ01000002.1 Protein Homology CDS 161773 162831 . - 0 ID=cds-WP_101431303.1;Parent=gene-CYJ02_RS01805;Dbxref=GenBank:WP_101431303.1;Name=WP_101431303.1;gbkey=CDS;gene=icaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612782.1;locus_tag=CYJ02_RS01805;product=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;protein_id=WP_101431303.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 162818 163684 . - . ID=gene-CYJ02_RS01810;Name=icaB;gbkey=Gene;gene=icaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS01810;old_locus_tag=CYJ02_01810 NZ_PJUQ01000002.1 Protein Homology CDS 162818 163684 . - 0 ID=cds-WP_014612783.1;Parent=gene-CYJ02_RS01810;Dbxref=GenBank:WP_014612783.1;Name=WP_014612783.1;Ontology_term=GO:0000271,GO:0019213;gbkey=CDS;gene=icaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612783.1;locus_tag=CYJ02_RS01810;product=intercellular adhesin biosynthesis polysaccharide N-deacetylase;protein_id=WP_014612783.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 163668 163964 . - . ID=gene-CYJ02_RS01815;Name=icaD;gbkey=Gene;gene=icaD;gene_biotype=protein_coding;locus_tag=CYJ02_RS01815;old_locus_tag=CYJ02_01815 NZ_PJUQ01000002.1 Protein Homology CDS 163668 163964 . - 0 ID=cds-WP_199274138.1;Parent=gene-CYJ02_RS01815;Dbxref=GenBank:WP_199274138.1;Name=WP_199274138.1;Ontology_term=GO:0000271,GO:0008375,GO:0005886;gbkey=CDS;gene=icaD;go_component=plasma membrane|0005886||IEA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166833.1;locus_tag=CYJ02_RS01815;product=intracellular adhesion protein IcaD;protein_id=WP_199274138.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 163961 165187 . - . ID=gene-CYJ02_RS01820;Name=icaA;gbkey=Gene;gene=icaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01820;old_locus_tag=CYJ02_01820 NZ_PJUQ01000002.1 Protein Homology CDS 163961 165187 . - 0 ID=cds-WP_101431304.1;Parent=gene-CYJ02_RS01820;Dbxref=GenBank:WP_101431304.1;Name=WP_101431304.1;gbkey=CDS;gene=icaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612785.1;locus_tag=CYJ02_RS01820;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase IcaA;protein_id=WP_101431304.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 165285 166166 . - . ID=gene-CYJ02_RS01825;Name=CYJ02_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01825;old_locus_tag=CYJ02_01825 NZ_PJUQ01000002.1 Protein Homology CDS 165285 166166 . - 0 ID=cds-WP_014612786.1;Parent=gene-CYJ02_RS01825;Dbxref=GenBank:WP_014612786.1;Name=WP_014612786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612786.1;locus_tag=CYJ02_RS01825;product=helix-turn-helix transcriptional regulator;protein_id=WP_014612786.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 166739 167263 . - . ID=gene-CYJ02_RS01830;Name=CYJ02_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01830;old_locus_tag=CYJ02_01830 NZ_PJUQ01000002.1 Protein Homology CDS 166739 167263 . - 0 ID=cds-WP_014612788.1;Parent=gene-CYJ02_RS01830;Dbxref=GenBank:WP_014612788.1;Name=WP_014612788.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612788.1;locus_tag=CYJ02_RS01830;product=DoxX family protein;protein_id=WP_014612788.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 167647 168273 . - . ID=gene-CYJ02_RS01835;Name=CYJ02_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01835;old_locus_tag=CYJ02_01835 NZ_PJUQ01000002.1 Protein Homology CDS 167647 168273 . - 0 ID=cds-WP_014612789.1;Parent=gene-CYJ02_RS01835;Dbxref=GenBank:WP_014612789.1;Name=WP_014612789.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=CYJ02_RS01835;product=FMN-dependent NADH-azoreductase;protein_id=WP_014612789.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 168535 169227 . + . ID=gene-CYJ02_RS01840;Name=CYJ02_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01840;old_locus_tag=CYJ02_01840 NZ_PJUQ01000002.1 Protein Homology CDS 168535 169227 . + 0 ID=cds-WP_063284833.1;Parent=gene-CYJ02_RS01840;Dbxref=GenBank:WP_063284833.1;Name=WP_063284833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612790.1;locus_tag=CYJ02_RS01840;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_063284833.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 169489 169905 . + . ID=gene-CYJ02_RS01845;Name=CYJ02_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01845;old_locus_tag=CYJ02_01845 NZ_PJUQ01000002.1 Protein Homology CDS 169489 169905 . + 0 ID=cds-WP_014612791.1;Parent=gene-CYJ02_RS01845;Dbxref=GenBank:WP_014612791.1;Name=WP_014612791.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612791.1;locus_tag=CYJ02_RS01845;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014612791.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 169990 171417 . - . ID=gene-CYJ02_RS01850;Name=CYJ02_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01850;old_locus_tag=CYJ02_01850 NZ_PJUQ01000002.1 Protein Homology CDS 169990 171417 . - 0 ID=cds-WP_101431305.1;Parent=gene-CYJ02_RS01850;Dbxref=GenBank:WP_101431305.1;Name=WP_101431305.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612792.1;locus_tag=CYJ02_RS01850;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_101431305.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 171680 171988 . - . ID=gene-CYJ02_RS01855;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=CYJ02_RS01855;old_locus_tag=CYJ02_01855 NZ_PJUQ01000002.1 Protein Homology CDS 171680 171988 . - 0 ID=cds-WP_063284835.1;Parent=gene-CYJ02_RS01855;Dbxref=GenBank:WP_063284835.1;Name=WP_063284835.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612793.1;locus_tag=CYJ02_RS01855;product=SPIN family peroxidase inhibitor;protein_id=WP_063284835.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 172363 172797 . - . ID=gene-CYJ02_RS01860;Name=CYJ02_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01860;old_locus_tag=CYJ02_01860 NZ_PJUQ01000002.1 Protein Homology CDS 172363 172797 . - 0 ID=cds-WP_014612794.1;Parent=gene-CYJ02_RS01860;Dbxref=GenBank:WP_014612794.1;Name=WP_014612794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=CYJ02_RS01860;product=Hsp20/alpha crystallin family protein;protein_id=WP_014612794.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 173239 173769 . + . ID=gene-CYJ02_RS01865;Name=CYJ02_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01865;old_locus_tag=CYJ02_01865 NZ_PJUQ01000002.1 Protein Homology CDS 173239 173769 . + 0 ID=cds-WP_014612795.1;Parent=gene-CYJ02_RS01865;Dbxref=GenBank:WP_014612795.1;Name=WP_014612795.1;Ontology_term=GO:0016151,GO:0016765;gbkey=CDS;go_function=nickel cation binding|0016151||IEA,transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612795.1;locus_tag=CYJ02_RS01865;product=YfiT family bacillithiol transferase;protein_id=WP_014612795.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 174017 175507 . + . ID=gene-CYJ02_RS01870;Name=CYJ02_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01870;old_locus_tag=CYJ02_01870 NZ_PJUQ01000002.1 Protein Homology CDS 174017 175507 . + 0 ID=cds-WP_014612796.1;Parent=gene-CYJ02_RS01870;Dbxref=GenBank:WP_014612796.1;Name=WP_014612796.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=CYJ02_RS01870;product=catalase;protein_id=WP_014612796.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 175723 176046 . + . ID=gene-CYJ02_RS01875;Name=CYJ02_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01875;old_locus_tag=CYJ02_01875 NZ_PJUQ01000002.1 Protein Homology CDS 175723 176046 . + 0 ID=cds-WP_014612797.1;Parent=gene-CYJ02_RS01875;Dbxref=GenBank:WP_014612797.1;Name=WP_014612797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612797.1;locus_tag=CYJ02_RS01875;product=hypothetical protein;protein_id=WP_014612797.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 176168 176614 . + . ID=gene-CYJ02_RS01880;Name=CYJ02_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01880;old_locus_tag=CYJ02_01880 NZ_PJUQ01000002.1 Protein Homology CDS 176168 176614 . + 0 ID=cds-WP_014612798.1;Parent=gene-CYJ02_RS01880;Dbxref=GenBank:WP_014612798.1;Name=WP_014612798.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166850.1;locus_tag=CYJ02_RS01880;product=Dps family protein;protein_id=WP_014612798.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 177581 178957 . + . ID=gene-CYJ02_RS01885;Name=CYJ02_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01885;old_locus_tag=CYJ02_01885 NZ_PJUQ01000002.1 Protein Homology CDS 177581 178957 . + 0 ID=cds-WP_014612801.1;Parent=gene-CYJ02_RS01885;Dbxref=GenBank:WP_014612801.1;Name=WP_014612801.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612801.1;locus_tag=CYJ02_RS01885;product=sodium:solute symporter family protein;protein_id=WP_014612801.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 179020 180177 . + . ID=gene-CYJ02_RS01890;Name=CYJ02_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01890;old_locus_tag=CYJ02_01890 NZ_PJUQ01000002.1 Protein Homology CDS 179020 180177 . + 0 ID=cds-WP_101431306.1;Parent=gene-CYJ02_RS01890;Dbxref=GenBank:WP_101431306.1;Name=WP_101431306.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612802.1;locus_tag=CYJ02_RS01890;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101431306.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 180400 181995 . + . ID=gene-CYJ02_RS01895;Name=CYJ02_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01895;old_locus_tag=CYJ02_01895 NZ_PJUQ01000002.1 Protein Homology CDS 180400 181995 . + 0 ID=cds-WP_101431307.1;Parent=gene-CYJ02_RS01895;Dbxref=GenBank:WP_101431307.1;Name=WP_101431307.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612803.1;locus_tag=CYJ02_RS01895;product=xylulokinase;protein_id=WP_101431307.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 182237 183346 . + . ID=gene-CYJ02_RS01900;Name=CYJ02_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01900;old_locus_tag=CYJ02_01900 NZ_PJUQ01000002.1 Protein Homology CDS 182237 183346 . + 0 ID=cds-WP_101431308.1;Parent=gene-CYJ02_RS01900;Dbxref=GenBank:WP_101431308.1;Name=WP_101431308.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168901.1;locus_tag=CYJ02_RS01900;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101431308.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 183340 184674 . + . ID=gene-CYJ02_RS01905;Name=CYJ02_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01905;old_locus_tag=CYJ02_01905 NZ_PJUQ01000002.1 Protein Homology CDS 183340 184674 . + 0 ID=cds-WP_063278660.1;Parent=gene-CYJ02_RS01905;Dbxref=GenBank:WP_063278660.1;Name=WP_063278660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729755.1;locus_tag=CYJ02_RS01905;product=nucleoside recognition domain-containing protein;protein_id=WP_063278660.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 184806 185855 . + . ID=gene-CYJ02_RS01910;Name=CYJ02_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01910;old_locus_tag=CYJ02_01910 NZ_PJUQ01000002.1 Protein Homology CDS 184806 185855 . + 0 ID=cds-WP_101431309.1;Parent=gene-CYJ02_RS01910;Dbxref=GenBank:WP_101431309.1;Name=WP_101431309.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=CYJ02_RS01910;product=ABC transporter permease;protein_id=WP_101431309.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 185868 186530 . + . ID=gene-CYJ02_RS01915;Name=CYJ02_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01915;old_locus_tag=CYJ02_01915 NZ_PJUQ01000002.1 Protein Homology CDS 185868 186530 . + 0 ID=cds-WP_037542118.1;Parent=gene-CYJ02_RS01915;Dbxref=GenBank:WP_037542118.1;Name=WP_037542118.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612807.1;locus_tag=CYJ02_RS01915;product=ABC transporter ATP-binding protein;protein_id=WP_037542118.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 186617 187039 . + . ID=gene-CYJ02_RS01920;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=CYJ02_RS01920;old_locus_tag=CYJ02_01920 NZ_PJUQ01000002.1 Protein Homology CDS 186617 187039 . + 0 ID=cds-WP_101431310.1;Parent=gene-CYJ02_RS01920;Dbxref=GenBank:WP_101431310.1;Name=WP_101431310.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168905.1;locus_tag=CYJ02_RS01920;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_101431310.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 187040 188365 . + . ID=gene-CYJ02_RS01925;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=CYJ02_RS01925;old_locus_tag=CYJ02_01925 NZ_PJUQ01000002.1 Protein Homology CDS 187040 188365 . + 0 ID=cds-WP_101431311.1;Parent=gene-CYJ02_RS01925;Dbxref=GenBank:WP_101431311.1;Name=WP_101431311.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612809.1;locus_tag=CYJ02_RS01925;product=hypothiocyanous acid reductase MerA;protein_id=WP_101431311.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 188562 189368 . + . ID=gene-CYJ02_RS01930;Name=CYJ02_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01930;old_locus_tag=CYJ02_01930 NZ_PJUQ01000002.1 Protein Homology CDS 188562 189368 . + 0 ID=cds-WP_101431312.1;Parent=gene-CYJ02_RS01930;Dbxref=GenBank:WP_101431312.1;Name=WP_101431312.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729750.1;locus_tag=CYJ02_RS01930;product=arylamine N-acetyltransferase family protein;protein_id=WP_101431312.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 189662 190156 . - . ID=gene-CYJ02_RS01935;Name=CYJ02_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01935;old_locus_tag=CYJ02_01935 NZ_PJUQ01000002.1 Protein Homology CDS 189662 190156 . - 0 ID=cds-WP_096548995.1;Parent=gene-CYJ02_RS01935;Dbxref=GenBank:WP_096548995.1;Name=WP_096548995.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=CYJ02_RS01935;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_096548995.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 190417 192321 . + . ID=gene-CYJ02_RS01940;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ02_RS01940;old_locus_tag=CYJ02_01940 NZ_PJUQ01000002.1 Protein Homology CDS 190417 192321 . + 0 ID=cds-WP_101431313.1;Parent=gene-CYJ02_RS01940;Dbxref=GenBank:WP_101431313.1;Name=WP_101431313.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219985.1;locus_tag=CYJ02_RS01940;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_101431313.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 192636 192737 . - . ID=gene-CYJ02_RS01945;Name=CYJ02_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01945;old_locus_tag=CYJ02_01945 NZ_PJUQ01000002.1 Protein Homology CDS 192636 192737 . - 0 ID=cds-WP_101431314.1;Parent=gene-CYJ02_RS01945;Dbxref=GenBank:WP_101431314.1;Name=WP_101431314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165094.1;locus_tag=CYJ02_RS01945;product=SE2200 family small protein;protein_id=WP_101431314.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 192751 194244 . - . ID=gene-CYJ02_RS01950;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CYJ02_RS01950;old_locus_tag=CYJ02_01950 NZ_PJUQ01000002.1 Protein Homology CDS 192751 194244 . - 0 ID=cds-WP_014612817.1;Parent=gene-CYJ02_RS01950;Dbxref=GenBank:WP_014612817.1;Name=WP_014612817.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=CYJ02_RS01950;product=L-lactate dehydrogenase (quinone);protein_id=WP_014612817.1;transl_table=11 NZ_PJUQ01000002.1 RefSeq gene 195001 197454 . + . ID=gene-CYJ02_RS01955;Name=CYJ02_RS01955;end_range=197454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01955;old_locus_tag=CYJ02_01955;partial=true NZ_PJUQ01000002.1 Protein Homology CDS 195001 197454 . + 0 ID=cds-WP_198586526.1;Parent=gene-CYJ02_RS01955;Dbxref=GenBank:WP_198586526.1;Name=WP_198586526.1;end_range=197454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS01955;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;protein_id=WP_198586526.1;transl_table=11 ##sequence-region NZ_PJUQ01000020.1 1 47522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000020.1 RefSeq region 1 47522 . + . ID=NZ_PJUQ01000020.1:1..47522;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000020.1 RefSeq gene 1 201 . + . ID=gene-CYJ02_RS09335;Name=CYJ02_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09335;old_locus_tag=CYJ02_09335;partial=true;start_range=.,1 NZ_PJUQ01000020.1 Protein Homology CDS 1 201 . + 0 ID=cds-WP_198586546.1;Parent=gene-CYJ02_RS09335;Dbxref=GenBank:WP_198586546.1;Name=WP_198586546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729285.1;locus_tag=CYJ02_RS09335;partial=true;product=transposase;protein_id=WP_198586546.1;start_range=.,1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 424 1026 . + . ID=gene-CYJ02_RS09340;Name=CYJ02_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09340;old_locus_tag=CYJ02_09340 NZ_PJUQ01000020.1 Protein Homology CDS 424 1026 . + 0 ID=cds-WP_015729444.1;Parent=gene-CYJ02_RS09340;Dbxref=GenBank:WP_015729444.1;Name=WP_015729444.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613332.1;locus_tag=CYJ02_RS09340;product=thymidine kinase;protein_id=WP_015729444.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 1026 2102 . + . ID=gene-CYJ02_RS09345;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09345;old_locus_tag=CYJ02_09345 NZ_PJUQ01000020.1 Protein Homology CDS 1026 2102 . + 0 ID=cds-WP_015729443.1;Parent=gene-CYJ02_RS09345;Dbxref=GenBank:WP_015729443.1;Name=WP_015729443.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CYJ02_RS09345;product=peptide chain release factor 1;protein_id=WP_015729443.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 2092 2934 . + . ID=gene-CYJ02_RS09350;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CYJ02_RS09350;old_locus_tag=CYJ02_09350 NZ_PJUQ01000020.1 Protein Homology CDS 2092 2934 . + 0 ID=cds-WP_014613334.1;Parent=gene-CYJ02_RS09350;Dbxref=GenBank:WP_014613334.1;Name=WP_014613334.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=CYJ02_RS09350;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_014613334.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 3100 4152 . + . ID=gene-CYJ02_RS09355;Name=CYJ02_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09355;old_locus_tag=CYJ02_09355 NZ_PJUQ01000020.1 Protein Homology CDS 3100 4152 . + 0 ID=cds-WP_014613335.1;Parent=gene-CYJ02_RS09355;Dbxref=GenBank:WP_014613335.1;Name=WP_014613335.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613335.1;locus_tag=CYJ02_RS09355;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_014613335.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 4149 4574 . + . ID=gene-CYJ02_RS09360;Name=CYJ02_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09360;old_locus_tag=CYJ02_09360 NZ_PJUQ01000020.1 Protein Homology CDS 4149 4574 . + 0 ID=cds-WP_014613336.1;Parent=gene-CYJ02_RS09360;Dbxref=GenBank:WP_014613336.1;Name=WP_014613336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=CYJ02_RS09360;product=low molecular weight protein arginine phosphatase;protein_id=WP_014613336.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 4692 5219 . + . ID=gene-CYJ02_RS09365;Name=CYJ02_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09365;old_locus_tag=CYJ02_09365 NZ_PJUQ01000020.1 Protein Homology CDS 4692 5219 . + 0 ID=cds-WP_014613337.1;Parent=gene-CYJ02_RS09365;Dbxref=GenBank:WP_014613337.1;Name=WP_014613337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=CYJ02_RS09365;product=TIGR01440 family protein;protein_id=WP_014613337.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 5240 6478 . + . ID=gene-CYJ02_RS09370;Name=CYJ02_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09370;old_locus_tag=CYJ02_09370 NZ_PJUQ01000020.1 Protein Homology CDS 5240 6478 . + 0 ID=cds-WP_014613338.1;Parent=gene-CYJ02_RS09370;Dbxref=GenBank:WP_014613338.1;Name=WP_014613338.1;Ontology_term=GO:0019264,GO:0004372;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA;go_process=glycine biosynthetic process from L-serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500830.1;locus_tag=CYJ02_RS09370;product=serine hydroxymethyltransferase;protein_id=WP_014613338.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 6512 7141 . + . ID=gene-CYJ02_RS09375;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CYJ02_RS09375;old_locus_tag=CYJ02_09375 NZ_PJUQ01000020.1 Protein Homology CDS 6512 7141 . + 0 ID=cds-WP_014613339.1;Parent=gene-CYJ02_RS09375;Dbxref=GenBank:WP_014613339.1;Name=WP_014613339.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=CYJ02_RS09375;product=uracil phosphoribosyltransferase;protein_id=WP_014613339.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 7164 8303 . + . ID=gene-CYJ02_RS09380;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09380;old_locus_tag=CYJ02_09380 NZ_PJUQ01000020.1 Protein Homology CDS 7164 8303 . + 0 ID=cds-WP_101431618.1;Parent=gene-CYJ02_RS09380;Dbxref=GenBank:WP_101431618.1;Name=WP_101431618.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169294.1;locus_tag=CYJ02_RS09380;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_101431618.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 8472 8828 . + . ID=gene-CYJ02_RS09385;Name=CYJ02_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09385;old_locus_tag=CYJ02_09385 NZ_PJUQ01000020.1 Protein Homology CDS 8472 8828 . + 0 ID=cds-WP_014613341.1;Parent=gene-CYJ02_RS09385;Dbxref=GenBank:WP_014613341.1;Name=WP_014613341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=CYJ02_RS09385;product=ATP synthase subunit I;protein_id=WP_014613341.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 8863 9585 . + . ID=gene-CYJ02_RS09390;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09390;old_locus_tag=CYJ02_09390 NZ_PJUQ01000020.1 Protein Homology CDS 8863 9585 . + 0 ID=cds-WP_096536389.1;Parent=gene-CYJ02_RS09390;Dbxref=GenBank:WP_096536389.1;Name=WP_096536389.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275237.1;locus_tag=CYJ02_RS09390;product=F0F1 ATP synthase subunit A;protein_id=WP_096536389.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 9628 9840 . + . ID=gene-CYJ02_RS09395;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CYJ02_RS09395;old_locus_tag=CYJ02_09395 NZ_PJUQ01000020.1 Protein Homology CDS 9628 9840 . + 0 ID=cds-WP_014613343.1;Parent=gene-CYJ02_RS09395;Dbxref=GenBank:WP_014613343.1;Name=WP_014613343.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613343.1;locus_tag=CYJ02_RS09395;product=F0F1 ATP synthase subunit C;protein_id=WP_014613343.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 10001 10525 . + . ID=gene-CYJ02_RS09400;Name=CYJ02_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09400;old_locus_tag=CYJ02_09400 NZ_PJUQ01000020.1 Protein Homology CDS 10001 10525 . + 0 ID=cds-WP_096534009.1;Parent=gene-CYJ02_RS09400;Dbxref=GenBank:WP_096534009.1;Name=WP_096534009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CYJ02_RS09400;product=F0F1 ATP synthase subunit B;protein_id=WP_096534009.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 10525 11064 . + . ID=gene-CYJ02_RS09405;Name=CYJ02_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09405;old_locus_tag=CYJ02_09405 NZ_PJUQ01000020.1 Protein Homology CDS 10525 11064 . + 0 ID=cds-WP_037542533.1;Parent=gene-CYJ02_RS09405;Dbxref=GenBank:WP_037542533.1;Name=WP_037542533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729438.1;locus_tag=CYJ02_RS09405;product=F0F1 ATP synthase subunit delta;protein_id=WP_037542533.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 11091 12602 . + . ID=gene-CYJ02_RS09410;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09410;old_locus_tag=CYJ02_09410 NZ_PJUQ01000020.1 Protein Homology CDS 11091 12602 . + 0 ID=cds-WP_014613346.1;Parent=gene-CYJ02_RS09410;Dbxref=GenBank:WP_014613346.1;Name=WP_014613346.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=CYJ02_RS09410;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014613346.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 12640 13506 . + . ID=gene-CYJ02_RS09415;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CYJ02_RS09415;old_locus_tag=CYJ02_09415 NZ_PJUQ01000020.1 Protein Homology CDS 12640 13506 . + 0 ID=cds-WP_026067008.1;Parent=gene-CYJ02_RS09415;Dbxref=GenBank:WP_026067008.1;Name=WP_026067008.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302681.1;locus_tag=CYJ02_RS09415;product=ATP synthase F1 subunit gamma;protein_id=WP_026067008.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 13531 14943 . + . ID=gene-CYJ02_RS09420;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CYJ02_RS09420;old_locus_tag=CYJ02_09420 NZ_PJUQ01000020.1 Protein Homology CDS 13531 14943 . + 0 ID=cds-WP_014613348.1;Parent=gene-CYJ02_RS09420;Dbxref=GenBank:WP_014613348.1;Name=WP_014613348.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CYJ02_RS09420;product=F0F1 ATP synthase subunit beta;protein_id=WP_014613348.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 14966 15370 . + . ID=gene-CYJ02_RS09425;Name=CYJ02_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09425;old_locus_tag=CYJ02_09425 NZ_PJUQ01000020.1 Protein Homology CDS 14966 15370 . + 0 ID=cds-WP_014613349.1;Parent=gene-CYJ02_RS09425;Dbxref=GenBank:WP_014613349.1;Name=WP_014613349.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094394.1;locus_tag=CYJ02_RS09425;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_014613349.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 15763 15993 . + . ID=gene-CYJ02_RS09430;Name=CYJ02_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09430;old_locus_tag=CYJ02_09430 NZ_PJUQ01000020.1 Protein Homology CDS 15763 15993 . + 0 ID=cds-WP_014613350.1;Parent=gene-CYJ02_RS09430;Dbxref=GenBank:WP_014613350.1;Name=WP_014613350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613350.1;locus_tag=CYJ02_RS09430;product=DUF1146 family protein;protein_id=WP_014613350.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 16104 17369 . + . ID=gene-CYJ02_RS09435;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09435;old_locus_tag=CYJ02_09435 NZ_PJUQ01000020.1 Protein Homology CDS 16104 17369 . + 0 ID=cds-WP_063284937.1;Parent=gene-CYJ02_RS09435;Dbxref=GenBank:WP_063284937.1;Name=WP_063284937.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=CYJ02_RS09435;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_063284937.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 17362 17559 . + . ID=gene-CYJ02_RS09440;Name=CYJ02_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09440;old_locus_tag=CYJ02_09440 NZ_PJUQ01000020.1 Protein Homology CDS 17362 17559 . + 0 ID=cds-WP_226957593.1;Parent=gene-CYJ02_RS09440;Dbxref=GenBank:WP_226957593.1;Name=WP_226957593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=CYJ02_RS09440;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_226957593.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 17559 18002 . + . ID=gene-CYJ02_RS09445;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS09445;old_locus_tag=CYJ02_09445 NZ_PJUQ01000020.1 Protein Homology CDS 17559 18002 . + 0 ID=cds-WP_014613353.1;Parent=gene-CYJ02_RS09445;Dbxref=GenBank:WP_014613353.1;Name=WP_014613353.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426460.1;locus_tag=CYJ02_RS09445;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_014613353.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 18118 18552 . - . ID=gene-CYJ02_RS09450;Name=CYJ02_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09450;old_locus_tag=CYJ02_09450 NZ_PJUQ01000020.1 Protein Homology CDS 18118 18552 . - 0 ID=cds-WP_014613354.1;Parent=gene-CYJ02_RS09450;Dbxref=GenBank:WP_014613354.1;Name=WP_014613354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613354.1;locus_tag=CYJ02_RS09450;product=YwpF-like family protein;protein_id=WP_014613354.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 18733 19089 . + . ID=gene-CYJ02_RS09455;Name=CYJ02_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09455;old_locus_tag=CYJ02_09455 NZ_PJUQ01000020.1 Protein Homology CDS 18733 19089 . + 0 ID=cds-WP_015729436.1;Parent=gene-CYJ02_RS09455;Dbxref=GenBank:WP_015729436.1;Name=WP_015729436.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729436.1;locus_tag=CYJ02_RS09455;product=single-stranded DNA-binding protein;protein_id=WP_015729436.1;transl_table=11 NZ_PJUQ01000020.1 cmsearch riboswitch 19503 19606 . + . ID=id-NZ_PJUQ01000020.1:19503..19606;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000020.1 RefSeq gene 19673 20356 . + . ID=gene-CYJ02_RS09460;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09460;old_locus_tag=CYJ02_09460 NZ_PJUQ01000020.1 Protein Homology CDS 19673 20356 . + 0 ID=cds-WP_014613356.1;Parent=gene-CYJ02_RS09460;Dbxref=GenBank:WP_014613356.1;Name=WP_014613356.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729435.1;locus_tag=CYJ02_RS09460;product=thiaminase II;protein_id=WP_014613356.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 20356 21162 . + . ID=gene-CYJ02_RS09465;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ02_RS09465;old_locus_tag=CYJ02_09465 NZ_PJUQ01000020.1 Protein Homology CDS 20356 21162 . + 0 ID=cds-WP_014613357.1;Parent=gene-CYJ02_RS09465;Dbxref=GenBank:WP_014613357.1;Name=WP_014613357.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=CYJ02_RS09465;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014613357.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 21164 21967 . + . ID=gene-CYJ02_RS09470;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CYJ02_RS09470;old_locus_tag=CYJ02_09470 NZ_PJUQ01000020.1 Protein Homology CDS 21164 21967 . + 0 ID=cds-WP_014613358.1;Parent=gene-CYJ02_RS09470;Dbxref=GenBank:WP_014613358.1;Name=WP_014613358.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165813.1;locus_tag=CYJ02_RS09470;product=hydroxyethylthiazole kinase;protein_id=WP_014613358.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 21957 22595 . + . ID=gene-CYJ02_RS09475;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CYJ02_RS09475;old_locus_tag=CYJ02_09475 NZ_PJUQ01000020.1 Protein Homology CDS 21957 22595 . + 0 ID=cds-WP_063284943.1;Parent=gene-CYJ02_RS09475;Dbxref=GenBank:WP_063284943.1;Name=WP_063284943.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613359.1;locus_tag=CYJ02_RS09475;product=thiamine phosphate synthase;protein_id=WP_063284943.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 22684 23550 . + . ID=gene-CYJ02_RS09480;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CYJ02_RS09480;old_locus_tag=CYJ02_09480 NZ_PJUQ01000020.1 Protein Homology CDS 22684 23550 . + 0 ID=cds-WP_014613360.1;Parent=gene-CYJ02_RS09480;Dbxref=GenBank:WP_014613360.1;Name=WP_014613360.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729433.1;locus_tag=CYJ02_RS09480;product=membrane protein insertase YidC;protein_id=WP_014613360.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 23604 24260 . - . ID=gene-CYJ02_RS09485;Name=CYJ02_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09485;old_locus_tag=CYJ02_09485 NZ_PJUQ01000020.1 Protein Homology CDS 23604 24260 . - 0 ID=cds-WP_063279128.1;Parent=gene-CYJ02_RS09485;Dbxref=GenBank:WP_063279128.1;Name=WP_063279128.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165816.1;locus_tag=CYJ02_RS09485;product=HD domain-containing protein;protein_id=WP_063279128.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 24281 25771 . - . ID=gene-CYJ02_RS09490;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ02_RS09490;old_locus_tag=CYJ02_09490 NZ_PJUQ01000020.1 Protein Homology CDS 24281 25771 . - 0 ID=cds-WP_065520420.1;Parent=gene-CYJ02_RS09490;Dbxref=GenBank:WP_065520420.1;Name=WP_065520420.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=CYJ02_RS09490;product=cardiolipin synthase;protein_id=WP_065520420.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 25903 26190 . + . ID=gene-CYJ02_RS09495;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=CYJ02_RS09495;old_locus_tag=CYJ02_09495 NZ_PJUQ01000020.1 Protein Homology CDS 25903 26190 . + 0 ID=cds-WP_014613363.1;Parent=gene-CYJ02_RS09495;Dbxref=GenBank:WP_014613363.1;Name=WP_014613363.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500801.1;locus_tag=CYJ02_RS09495;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_014613363.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 26203 26424 . + . ID=gene-CYJ02_RS09500;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=CYJ02_RS09500;old_locus_tag=CYJ02_09500 NZ_PJUQ01000020.1 Protein Homology CDS 26203 26424 . + 0 ID=cds-WP_014613364.1;Parent=gene-CYJ02_RS09500;Dbxref=GenBank:WP_014613364.1;Name=WP_014613364.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613364.1;locus_tag=CYJ02_RS09500;product=putative copper chaperone CsoZ;protein_id=WP_014613364.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 26428 26634 . + . ID=gene-CYJ02_RS09505;Name=CYJ02_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09505;old_locus_tag=CYJ02_09505 NZ_PJUQ01000020.1 Protein Homology CDS 26428 26634 . + 0 ID=cds-WP_014613365.1;Parent=gene-CYJ02_RS09505;Dbxref=GenBank:WP_014613365.1;Name=WP_014613365.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613365.1;locus_tag=CYJ02_RS09505;product=cation transporter;protein_id=WP_014613365.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 26735 28915 . + . ID=gene-CYJ02_RS09510;Name=CYJ02_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09510;old_locus_tag=CYJ02_09510 NZ_PJUQ01000020.1 Protein Homology CDS 26735 28915 . + 0 ID=cds-WP_063279127.1;Parent=gene-CYJ02_RS09510;Dbxref=GenBank:WP_063279127.1;Name=WP_063279127.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165821.1;locus_tag=CYJ02_RS09510;product=heavy metal translocating P-type ATPase;protein_id=WP_063279127.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 29001 29147 . + . ID=gene-CYJ02_RS12535;Name=CYJ02_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12535 NZ_PJUQ01000020.1 Protein Homology CDS 29001 29147 . + 0 ID=cds-WP_014613367.1;Parent=gene-CYJ02_RS12535;Dbxref=GenBank:WP_014613367.1;Name=WP_014613367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613367.1;locus_tag=CYJ02_RS12535;product=Lmo0850 family protein;protein_id=WP_014613367.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 30115 30843 . + . ID=gene-CYJ02_RS09520;Name=CYJ02_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09520;old_locus_tag=CYJ02_09520 NZ_PJUQ01000020.1 Protein Homology CDS 30115 30843 . + 0 ID=cds-WP_014613368.1;Parent=gene-CYJ02_RS09520;Dbxref=GenBank:WP_014613368.1;Name=WP_014613368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613368.1;locus_tag=CYJ02_RS09520;product=hypothetical protein;protein_id=WP_014613368.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 30893 32101 . - . ID=gene-CYJ02_RS09525;Name=CYJ02_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09525;old_locus_tag=CYJ02_09525 NZ_PJUQ01000020.1 Protein Homology CDS 30893 32101 . - 0 ID=cds-WP_014613369.1;Parent=gene-CYJ02_RS09525;Dbxref=GenBank:WP_014613369.1;Name=WP_014613369.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165823.1;locus_tag=CYJ02_RS09525;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_014613369.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 32255 33325 . + . ID=gene-CYJ02_RS09530;Name=CYJ02_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09530;old_locus_tag=CYJ02_09530 NZ_PJUQ01000020.1 Protein Homology CDS 32255 33325 . + 0 ID=cds-WP_014613370.1;Parent=gene-CYJ02_RS09530;Dbxref=GenBank:WP_014613370.1;Name=WP_014613370.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=CYJ02_RS09530;product=D-alanine--D-alanine ligase;protein_id=WP_014613370.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 33337 34701 . + . ID=gene-CYJ02_RS09535;Name=CYJ02_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09535;old_locus_tag=CYJ02_09535 NZ_PJUQ01000020.1 Protein Homology CDS 33337 34701 . + 0 ID=cds-WP_101431619.1;Parent=gene-CYJ02_RS09535;Dbxref=GenBank:WP_101431619.1;Name=WP_101431619.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729431.1;locus_tag=CYJ02_RS09535;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_101431619.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 34982 36469 . + . ID=gene-CYJ02_RS09540;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09540;old_locus_tag=CYJ02_09540 NZ_PJUQ01000020.1 Protein Homology CDS 34982 36469 . + 0 ID=cds-WP_014613372.1;Parent=gene-CYJ02_RS09540;Dbxref=GenBank:WP_014613372.1;Name=WP_014613372.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=CYJ02_RS09540;product=degradosome RNA helicase CshA;protein_id=WP_014613372.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 36708 37181 . + . ID=gene-CYJ02_RS09545;Name=CYJ02_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09545;old_locus_tag=CYJ02_09545 NZ_PJUQ01000020.1 Protein Homology CDS 36708 37181 . + 0 ID=cds-WP_014613373.1;Parent=gene-CYJ02_RS09545;Dbxref=GenBank:WP_014613373.1;Name=WP_014613373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165827.1;locus_tag=CYJ02_RS09545;product=PH domain-containing protein;protein_id=WP_014613373.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 37174 38703 . + . ID=gene-CYJ02_RS09550;Name=CYJ02_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09550;old_locus_tag=CYJ02_09550 NZ_PJUQ01000020.1 Protein Homology CDS 37174 38703 . + 0 ID=cds-WP_099997491.1;Parent=gene-CYJ02_RS09550;Dbxref=GenBank:WP_099997491.1;Name=WP_099997491.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613374.1;locus_tag=CYJ02_RS09550;product=PH domain-containing protein;protein_id=WP_099997491.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 38687 39205 . + . ID=gene-CYJ02_RS09555;Name=CYJ02_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09555;old_locus_tag=CYJ02_09555 NZ_PJUQ01000020.1 Protein Homology CDS 38687 39205 . + 0 ID=cds-WP_014613375.1;Parent=gene-CYJ02_RS09555;Dbxref=GenBank:WP_014613375.1;Name=WP_014613375.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165829.1;locus_tag=CYJ02_RS09555;product=PH domain-containing protein;protein_id=WP_014613375.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 39202 39552 . + . ID=gene-CYJ02_RS09560;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CYJ02_RS09560;old_locus_tag=CYJ02_09560 NZ_PJUQ01000020.1 Protein Homology CDS 39202 39552 . + 0 ID=cds-WP_014613376.1;Parent=gene-CYJ02_RS09560;Dbxref=GenBank:WP_014613376.1;Name=WP_014613376.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165830.1;locus_tag=CYJ02_RS09560;product=holo-ACP synthase;protein_id=WP_014613376.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 39586 40734 . + . ID=gene-CYJ02_RS09565;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ02_RS09565;old_locus_tag=CYJ02_09565 NZ_PJUQ01000020.1 Protein Homology CDS 39586 40734 . + 0 ID=cds-WP_014613377.1;Parent=gene-CYJ02_RS09565;Dbxref=GenBank:WP_014613377.1;Name=WP_014613377.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=CYJ02_RS09565;product=alanine racemase;protein_id=WP_014613377.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 40819 40989 . + . ID=gene-CYJ02_RS09570;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=CYJ02_RS09570;old_locus_tag=CYJ02_09570 NZ_PJUQ01000020.1 Protein Homology CDS 40819 40989 . + 0 ID=cds-WP_014613378.1;Parent=gene-CYJ02_RS09570;Dbxref=GenBank:WP_014613378.1;Name=WP_014613378.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=CYJ02_RS09570;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_014613378.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 40990 41343 . + . ID=gene-CYJ02_RS09575;Name=CYJ02_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09575;old_locus_tag=CYJ02_09575 NZ_PJUQ01000020.1 Protein Homology CDS 40990 41343 . + 0 ID=cds-WP_014613379.1;Parent=gene-CYJ02_RS09575;Dbxref=GenBank:WP_014613379.1;Name=WP_014613379.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=CYJ02_RS09575;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014613379.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 41401 42405 . + . ID=gene-CYJ02_RS09580;Name=CYJ02_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09580;old_locus_tag=CYJ02_09580 NZ_PJUQ01000020.1 Protein Homology CDS 41401 42405 . + 0 ID=cds-WP_014613380.1;Parent=gene-CYJ02_RS09580;Dbxref=GenBank:WP_014613380.1;Name=WP_014613380.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613380.1;locus_tag=CYJ02_RS09580;product=SpoIIE family protein phosphatase;protein_id=WP_014613380.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 42484 42810 . + . ID=gene-CYJ02_RS09585;Name=CYJ02_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09585;old_locus_tag=CYJ02_09585 NZ_PJUQ01000020.1 Protein Homology CDS 42484 42810 . + 0 ID=cds-WP_014613381.1;Parent=gene-CYJ02_RS09585;Dbxref=GenBank:WP_014613381.1;Name=WP_014613381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CYJ02_RS09585;product=anti-sigma factor antagonist;protein_id=WP_014613381.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 42810 43289 . + . ID=gene-CYJ02_RS09590;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=CYJ02_RS09590;old_locus_tag=CYJ02_09590 NZ_PJUQ01000020.1 Protein Homology CDS 42810 43289 . + 0 ID=cds-WP_031253870.1;Parent=gene-CYJ02_RS09590;Dbxref=GenBank:WP_031253870.1;Name=WP_031253870.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169269.1;locus_tag=CYJ02_RS09590;product=anti-sigma B factor RsbW;protein_id=WP_031253870.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 43264 44034 . + . ID=gene-CYJ02_RS09595;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09595;old_locus_tag=CYJ02_09595 NZ_PJUQ01000020.1 Protein Homology CDS 43264 44034 . + 0 ID=cds-WP_015729428.1;Parent=gene-CYJ02_RS09595;Dbxref=GenBank:WP_015729428.1;Name=WP_015729428.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CYJ02_RS09595;product=RNA polymerase sigma factor SigB;protein_id=WP_015729428.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 44313 46463 . + . ID=gene-CYJ02_RS09600;Name=CYJ02_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09600;old_locus_tag=CYJ02_09600 NZ_PJUQ01000020.1 Protein Homology CDS 44313 46463 . + 0 ID=cds-WP_101431620.1;Parent=gene-CYJ02_RS09600;Dbxref=GenBank:WP_101431620.1;Name=WP_101431620.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505949.1;locus_tag=CYJ02_RS09600;product=Tex family protein;protein_id=WP_101431620.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 46456 46908 . + . ID=gene-CYJ02_RS09605;Name=CYJ02_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09605;old_locus_tag=CYJ02_09605 NZ_PJUQ01000020.1 Protein Homology CDS 46456 46908 . + 0 ID=cds-WP_015729426.1;Parent=gene-CYJ02_RS09605;Dbxref=GenBank:WP_015729426.1;Name=WP_015729426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219959.1;locus_tag=CYJ02_RS09605;product=SprT family protein;protein_id=WP_015729426.1;transl_table=11 NZ_PJUQ01000020.1 RefSeq gene 47263 47345 . + . ID=gene-CYJ02_RS09610;Name=CYJ02_RS09610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS09610;old_locus_tag=CYJ02_09610 NZ_PJUQ01000020.1 tRNAscan-SE tRNA 47263 47345 . + . ID=rna-CYJ02_RS09610;Parent=gene-CYJ02_RS09610;anticodon=(pos:47296..47298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS09610;product=tRNA-Leu NZ_PJUQ01000020.1 tRNAscan-SE exon 47263 47345 . + . ID=exon-CYJ02_RS09610-1;Parent=rna-CYJ02_RS09610;anticodon=(pos:47296..47298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS09610;product=tRNA-Leu NZ_PJUQ01000020.1 RefSeq gene 47370 47443 . + . ID=gene-CYJ02_RS09615;Name=CYJ02_RS09615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS09615;old_locus_tag=CYJ02_09615 NZ_PJUQ01000020.1 tRNAscan-SE tRNA 47370 47443 . + . ID=rna-CYJ02_RS09615;Parent=gene-CYJ02_RS09615;anticodon=(pos:47402..47404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS09615;product=tRNA-Gly NZ_PJUQ01000020.1 tRNAscan-SE exon 47370 47443 . + . ID=exon-CYJ02_RS09615-1;Parent=rna-CYJ02_RS09615;anticodon=(pos:47402..47404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS09615;product=tRNA-Gly ##sequence-region NZ_PJUQ01000021.1 1 32607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000021.1 RefSeq region 1 32607 . + . ID=NZ_PJUQ01000021.1:1..32607;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000021.1 RefSeq pseudogene 1 296 . - . ID=gene-CYJ02_RS12905;Name=CYJ02_RS12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12905;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000021.1 GeneMarkS-2+ CDS 1 296 . - 0 ID=cds-CYJ02_RS12905;Parent=gene-CYJ02_RS12905;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12905;partial=true;product=MSCRAMM family adhesin SdrC;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 301 561 . + . ID=gene-CYJ02_RS12910;Name=CYJ02_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12910 NZ_PJUQ01000021.1 Protein Homology CDS 301 561 . + 0 ID=cds-WP_099984936.1;Parent=gene-CYJ02_RS12910;Dbxref=GenBank:WP_099984936.1;Name=WP_099984936.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=CYJ02_RS12910;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_099984936.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 685 1893 . + . ID=gene-CYJ02_RS09625;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=CYJ02_RS09625;old_locus_tag=CYJ02_09625 NZ_PJUQ01000021.1 Protein Homology CDS 685 1893 . + 0 ID=cds-WP_037544107.1;Parent=gene-CYJ02_RS09625;Dbxref=GenBank:WP_037544107.1;Name=WP_037544107.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916108.1;locus_tag=CYJ02_RS09625;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_037544107.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 1904 3469 . + . ID=gene-CYJ02_RS09630;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CYJ02_RS09630;old_locus_tag=CYJ02_09630 NZ_PJUQ01000021.1 Protein Homology CDS 1904 3469 . + 0 ID=cds-WP_101431622.1;Parent=gene-CYJ02_RS09630;Dbxref=GenBank:WP_101431622.1;Name=WP_101431622.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612820.1;locus_tag=CYJ02_RS09630;product=accessory Sec system protein Asp1;protein_id=WP_101431622.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 3453 4997 . + . ID=gene-CYJ02_RS09635;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CYJ02_RS09635;old_locus_tag=CYJ02_09635 NZ_PJUQ01000021.1 Protein Homology CDS 3453 4997 . + 0 ID=cds-WP_101431623.1;Parent=gene-CYJ02_RS09635;Dbxref=GenBank:WP_101431623.1;Name=WP_101431623.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612821.1;locus_tag=CYJ02_RS09635;product=accessory Sec system protein Asp2;protein_id=WP_101431623.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 4987 5913 . + . ID=gene-CYJ02_RS09640;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CYJ02_RS09640;old_locus_tag=CYJ02_09640 NZ_PJUQ01000021.1 Protein Homology CDS 4987 5913 . + 0 ID=cds-WP_101431624.1;Parent=gene-CYJ02_RS09640;Dbxref=GenBank:WP_101431624.1;Name=WP_101431624.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729740.1;locus_tag=CYJ02_RS09640;product=accessory Sec system protein Asp3;protein_id=WP_101431624.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 5910 8297 . + . ID=gene-CYJ02_RS09645;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CYJ02_RS09645;old_locus_tag=CYJ02_09645 NZ_PJUQ01000021.1 Protein Homology CDS 5910 8297 . + 0 ID=cds-WP_099986839.1;Parent=gene-CYJ02_RS09645;Dbxref=GenBank:WP_099986839.1;Name=WP_099986839.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=CYJ02_RS09645;product=accessory Sec system translocase SecA2;protein_id=WP_099986839.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 8313 9821 . + . ID=gene-CYJ02_RS09650;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09650;old_locus_tag=CYJ02_09650 NZ_PJUQ01000021.1 Protein Homology CDS 8313 9821 . + 0 ID=cds-WP_014612824.1;Parent=gene-CYJ02_RS09650;Dbxref=GenBank:WP_014612824.1;Name=WP_014612824.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612824.1;locus_tag=CYJ02_RS09650;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_014612824.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 9814 11145 . + . ID=gene-CYJ02_RS09655;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09655;old_locus_tag=CYJ02_09655 NZ_PJUQ01000021.1 Protein Homology CDS 9814 11145 . + 0 ID=cds-WP_014612825.1;Parent=gene-CYJ02_RS09655;Dbxref=GenBank:WP_014612825.1;Name=WP_014612825.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=CYJ02_RS09655;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_014612825.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 11207 12388 . - . ID=gene-CYJ02_RS09660;Name=CYJ02_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09660;old_locus_tag=CYJ02_09660 NZ_PJUQ01000021.1 Protein Homology CDS 11207 12388 . - 0 ID=cds-WP_101431625.1;Parent=gene-CYJ02_RS09660;Dbxref=GenBank:WP_101431625.1;Name=WP_101431625.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612826.1;locus_tag=CYJ02_RS09660;product=thiolase family protein;protein_id=WP_101431625.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 12412 14673 . - . ID=gene-CYJ02_RS09665;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09665;old_locus_tag=CYJ02_09665 NZ_PJUQ01000021.1 Protein Homology CDS 12412 14673 . - 0 ID=cds-WP_101431626.1;Parent=gene-CYJ02_RS09665;Dbxref=GenBank:WP_101431626.1;Name=WP_101431626.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612827.1;locus_tag=CYJ02_RS09665;product=3-hydroxyacyl-CoA dehydrogenase/crotonase FadB;protein_id=WP_101431626.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 14719 15930 . - . ID=gene-CYJ02_RS09670;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CYJ02_RS09670;old_locus_tag=CYJ02_09670 NZ_PJUQ01000021.1 Protein Homology CDS 14719 15930 . - 0 ID=cds-WP_014612828.1;Parent=gene-CYJ02_RS09670;Dbxref=GenBank:WP_014612828.1;Name=WP_014612828.1;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167102.1;locus_tag=CYJ02_RS09670;product=acyl-CoA dehydrogenase FadE;protein_id=WP_014612828.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 15967 17481 . - . ID=gene-CYJ02_RS09675;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CYJ02_RS09675;old_locus_tag=CYJ02_09675 NZ_PJUQ01000021.1 Protein Homology CDS 15967 17481 . - 0 ID=cds-WP_015729735.1;Parent=gene-CYJ02_RS09675;Dbxref=GenBank:WP_015729735.1;Name=WP_015729735.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612829.1;locus_tag=CYJ02_RS09675;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_015729735.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 17500 19071 . - . ID=gene-CYJ02_RS09680;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=CYJ02_RS09680;old_locus_tag=CYJ02_09680 NZ_PJUQ01000021.1 Protein Homology CDS 17500 19071 . - 0 ID=cds-WP_015729734.1;Parent=gene-CYJ02_RS09680;Dbxref=GenBank:WP_015729734.1;Name=WP_015729734.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729734.1;locus_tag=CYJ02_RS09680;product=fatty acid degradation protein FadX;protein_id=WP_015729734.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 19359 20531 . - . ID=gene-CYJ02_RS09685;Name=CYJ02_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09685;old_locus_tag=CYJ02_09685 NZ_PJUQ01000021.1 Protein Homology CDS 19359 20531 . - 0 ID=cds-WP_014612831.1;Parent=gene-CYJ02_RS09685;Dbxref=GenBank:WP_014612831.1;Name=WP_014612831.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729733.1;locus_tag=CYJ02_RS09685;product=MFS transporter;protein_id=WP_014612831.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 20876 21919 . - . ID=gene-CYJ02_RS09690;Name=CYJ02_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09690;old_locus_tag=CYJ02_09690 NZ_PJUQ01000021.1 Protein Homology CDS 20876 21919 . - 0 ID=cds-WP_037542148.1;Parent=gene-CYJ02_RS09690;Dbxref=GenBank:WP_037542148.1;Name=WP_037542148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612832.1;locus_tag=CYJ02_RS09690;product=acyl-CoA dehydrogenase family protein;protein_id=WP_037542148.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 21939 22703 . - . ID=gene-CYJ02_RS09695;Name=CYJ02_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09695;old_locus_tag=CYJ02_09695 NZ_PJUQ01000021.1 Protein Homology CDS 21939 22703 . - 0 ID=cds-WP_037542150.1;Parent=gene-CYJ02_RS09695;Dbxref=GenBank:WP_037542150.1;Name=WP_037542150.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729730.1;locus_tag=CYJ02_RS09695;product=ABC transporter permease;protein_id=WP_037542150.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 22709 23656 . - . ID=gene-CYJ02_RS09700;Name=CYJ02_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09700;old_locus_tag=CYJ02_09700 NZ_PJUQ01000021.1 Protein Homology CDS 22709 23656 . - 0 ID=cds-WP_101431627.1;Parent=gene-CYJ02_RS09700;Dbxref=GenBank:WP_101431627.1;Name=WP_101431627.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612834.1;locus_tag=CYJ02_RS09700;product=ABC transporter substrate-binding protein;protein_id=WP_101431627.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 23670 24410 . - . ID=gene-CYJ02_RS09705;Name=CYJ02_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09705;old_locus_tag=CYJ02_09705 NZ_PJUQ01000021.1 Protein Homology CDS 23670 24410 . - 0 ID=cds-WP_063279033.1;Parent=gene-CYJ02_RS09705;Dbxref=GenBank:WP_063279033.1;Name=WP_063279033.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590849.1;locus_tag=CYJ02_RS09705;product=ABC transporter ATP-binding protein;protein_id=WP_063279033.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 24581 25093 . - . ID=gene-CYJ02_RS09710;Name=CYJ02_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09710;old_locus_tag=CYJ02_09710 NZ_PJUQ01000021.1 Protein Homology CDS 24581 25093 . - 0 ID=cds-WP_014612836.1;Parent=gene-CYJ02_RS09710;Dbxref=GenBank:WP_014612836.1;Name=WP_014612836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171926.1;locus_tag=CYJ02_RS09710;product=DUF4242 domain-containing protein;protein_id=WP_014612836.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 25320 25775 . + . ID=gene-CYJ02_RS09715;Name=CYJ02_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09715;old_locus_tag=CYJ02_09715 NZ_PJUQ01000021.1 Protein Homology CDS 25320 25775 . + 0 ID=cds-WP_101431628.1;Parent=gene-CYJ02_RS09715;Dbxref=GenBank:WP_101431628.1;Name=WP_101431628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220171.1;locus_tag=CYJ02_RS09715;product=P-loop NTPase family protein;protein_id=WP_101431628.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 26114 26629 . - . ID=gene-CYJ02_RS09720;Name=CYJ02_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09720;old_locus_tag=CYJ02_09720 NZ_PJUQ01000021.1 Protein Homology CDS 26114 26629 . - 0 ID=cds-WP_014612838.1;Parent=gene-CYJ02_RS09720;Dbxref=GenBank:WP_014612838.1;Name=WP_014612838.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167112.1;locus_tag=CYJ02_RS09720;product=peroxiredoxin family protein;protein_id=WP_014612838.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 26899 27870 . + . ID=gene-CYJ02_RS09725;Name=CYJ02_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09725;old_locus_tag=CYJ02_09725 NZ_PJUQ01000021.1 Protein Homology CDS 26899 27870 . + 0 ID=cds-WP_014612839.1;Parent=gene-CYJ02_RS09725;Dbxref=GenBank:WP_014612839.1;Name=WP_014612839.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=CYJ02_RS09725;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014612839.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 27870 28754 . + . ID=gene-CYJ02_RS09730;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CYJ02_RS09730;old_locus_tag=CYJ02_09730 NZ_PJUQ01000021.1 Protein Homology CDS 27870 28754 . + 0 ID=cds-WP_101431629.1;Parent=gene-CYJ02_RS09730;Dbxref=GenBank:WP_101431629.1;Name=WP_101431629.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612840.1;locus_tag=CYJ02_RS09730;product=ribokinase;protein_id=WP_101431629.1;transl_table=11 NZ_PJUQ01000021.1 RefSeq pseudogene 28816 29137 . + . ID=gene-CYJ02_RS09735;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=CYJ02_RS09735;old_locus_tag=CYJ02_09735;pseudo=true NZ_PJUQ01000021.1 Protein Homology CDS 28816 29137 . + 0 ID=cds-CYJ02_RS09735;Parent=gene-CYJ02_RS09735;Note=frameshifted;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303169.1;locus_tag=CYJ02_RS09735;product=D-ribose pyranase;pseudo=true;transl_table=11 NZ_PJUQ01000021.1 RefSeq gene 30783 32607 . + . ID=gene-CYJ02_RS09740;Name=CYJ02_RS09740;end_range=32607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09740;old_locus_tag=CYJ02_09740;partial=true NZ_PJUQ01000021.1 Protein Homology CDS 30783 32607 . + 0 ID=cds-WP_133121714.1;Parent=gene-CYJ02_RS09740;Dbxref=GenBank:WP_133121714.1;Name=WP_133121714.1;Ontology_term=GO:0016020;end_range=32607,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501257.1;locus_tag=CYJ02_RS09740;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=WP_133121714.1;transl_table=11 ##sequence-region NZ_PJUQ01000022.1 1 33550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000022.1 RefSeq region 1 33550 . + . ID=NZ_PJUQ01000022.1:1..33550;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000022.1 RefSeq gene 454 837 . - . ID=gene-CYJ02_RS09745;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CYJ02_RS09745;old_locus_tag=CYJ02_09745 NZ_PJUQ01000022.1 Protein Homology CDS 454 837 . - 0 ID=cds-WP_014614860.1;Parent=gene-CYJ02_RS09745;Dbxref=GenBank:WP_014614860.1;Name=WP_014614860.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=CYJ02_RS09745;product=aspartate 1-decarboxylase;protein_id=WP_014614860.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 834 1694 . - . ID=gene-CYJ02_RS09750;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CYJ02_RS09750;old_locus_tag=CYJ02_09750 NZ_PJUQ01000022.1 Protein Homology CDS 834 1694 . - 0 ID=cds-WP_101431630.1;Parent=gene-CYJ02_RS09750;Dbxref=GenBank:WP_101431630.1;Name=WP_101431630.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166913.1;locus_tag=CYJ02_RS09750;product=pantoate--beta-alanine ligase;protein_id=WP_101431630.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 1691 2503 . - . ID=gene-CYJ02_RS09755;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09755;old_locus_tag=CYJ02_09755 NZ_PJUQ01000022.1 Protein Homology CDS 1691 2503 . - 0 ID=cds-WP_014614862.1;Parent=gene-CYJ02_RS09755;Dbxref=GenBank:WP_014614862.1;Name=WP_014614862.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614862.1;locus_tag=CYJ02_RS09755;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014614862.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 2755 3615 . + . ID=gene-CYJ02_RS09760;Name=CYJ02_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09760;old_locus_tag=CYJ02_09760 NZ_PJUQ01000022.1 Protein Homology CDS 2755 3615 . + 0 ID=cds-WP_015728553.1;Parent=gene-CYJ02_RS09760;Dbxref=GenBank:WP_015728553.1;Name=WP_015728553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168625.1;locus_tag=CYJ02_RS09760;product=oxidoreductase;protein_id=WP_015728553.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 3705 5030 . - . ID=gene-CYJ02_RS09765;Name=CYJ02_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09765;old_locus_tag=CYJ02_09765 NZ_PJUQ01000022.1 Protein Homology CDS 3705 5030 . - 0 ID=cds-WP_014614864.1;Parent=gene-CYJ02_RS09765;Dbxref=GenBank:WP_014614864.1;Name=WP_014614864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166916.1;locus_tag=CYJ02_RS09765;product=6-phospho-alpha-glucosidase;protein_id=WP_014614864.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 5031 6617 . - . ID=gene-CYJ02_RS09770;Name=CYJ02_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09770;old_locus_tag=CYJ02_09770 NZ_PJUQ01000022.1 Protein Homology CDS 5031 6617 . - 0 ID=cds-WP_020220130.1;Parent=gene-CYJ02_RS09770;Dbxref=GenBank:WP_020220130.1;Name=WP_020220130.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166917.1;locus_tag=CYJ02_RS09770;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_020220130.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 6886 7641 . + . ID=gene-CYJ02_RS09775;Name=CYJ02_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09775;old_locus_tag=CYJ02_09775 NZ_PJUQ01000022.1 Protein Homology CDS 6886 7641 . + 0 ID=cds-WP_014614866.1;Parent=gene-CYJ02_RS09775;Dbxref=GenBank:WP_014614866.1;Name=WP_014614866.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614866.1;locus_tag=CYJ02_RS09775;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014614866.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 7767 8327 . - . ID=gene-CYJ02_RS09780;Name=CYJ02_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09780;old_locus_tag=CYJ02_09780 NZ_PJUQ01000022.1 Protein Homology CDS 7767 8327 . - 0 ID=cds-WP_101431631.1;Parent=gene-CYJ02_RS09780;Dbxref=GenBank:WP_101431631.1;Name=WP_101431631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728551.1;locus_tag=CYJ02_RS09780;product=hypothetical protein;protein_id=WP_101431631.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 8640 9812 . + . ID=gene-CYJ02_RS09785;Name=CYJ02_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09785;old_locus_tag=CYJ02_09785 NZ_PJUQ01000022.1 Protein Homology CDS 8640 9812 . + 0 ID=cds-WP_014614872.1;Parent=gene-CYJ02_RS09785;Dbxref=GenBank:WP_014614872.1;Name=WP_014614872.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614872.1;locus_tag=CYJ02_RS09785;product=MFS transporter;protein_id=WP_014614872.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 10056 10484 . + . ID=gene-CYJ02_RS09790;Name=CYJ02_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09790;old_locus_tag=CYJ02_09790 NZ_PJUQ01000022.1 Protein Homology CDS 10056 10484 . + 0 ID=cds-WP_101431632.1;Parent=gene-CYJ02_RS09790;Dbxref=GenBank:WP_101431632.1;Name=WP_101431632.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614873.1;locus_tag=CYJ02_RS09790;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_101431632.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 10678 11868 . - . ID=gene-CYJ02_RS09795;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=CYJ02_RS09795;old_locus_tag=CYJ02_09795 NZ_PJUQ01000022.1 Protein Homology CDS 10678 11868 . - 0 ID=cds-WP_014614875.1;Parent=gene-CYJ02_RS09795;Dbxref=GenBank:WP_014614875.1;Name=WP_014614875.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614875.1;locus_tag=CYJ02_RS09795;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_014614875.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 11880 12620 . - . ID=gene-CYJ02_RS09800;Name=CYJ02_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09800;old_locus_tag=CYJ02_09800 NZ_PJUQ01000022.1 Protein Homology CDS 11880 12620 . - 0 ID=cds-WP_014614876.1;Parent=gene-CYJ02_RS09800;Dbxref=GenBank:WP_014614876.1;Name=WP_014614876.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=CYJ02_RS09800;product=ABC transporter ATP-binding protein;protein_id=WP_014614876.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 12614 13432 . - . ID=gene-CYJ02_RS09805;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=CYJ02_RS09805;old_locus_tag=CYJ02_09805 NZ_PJUQ01000022.1 Protein Homology CDS 12614 13432 . - 0 ID=cds-WP_014614877.1;Parent=gene-CYJ02_RS09805;Dbxref=GenBank:WP_014614877.1;Name=WP_014614877.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=CYJ02_RS09805;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_014614877.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 13432 14295 . - . ID=gene-CYJ02_RS09810;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=CYJ02_RS09810;old_locus_tag=CYJ02_09810 NZ_PJUQ01000022.1 Protein Homology CDS 13432 14295 . - 0 ID=cds-WP_063284556.1;Parent=gene-CYJ02_RS09810;Dbxref=GenBank:WP_063284556.1;Name=WP_063284556.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614878.1;locus_tag=CYJ02_RS09810;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_063284556.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 14297 15229 . - . ID=gene-CYJ02_RS09815;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=CYJ02_RS09815;old_locus_tag=CYJ02_09815 NZ_PJUQ01000022.1 Protein Homology CDS 14297 15229 . - 0 ID=cds-WP_015728548.1;Parent=gene-CYJ02_RS09815;Dbxref=GenBank:WP_015728548.1;Name=WP_015728548.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728548.1;locus_tag=CYJ02_RS09815;product=nickel/cobalt ABC transporter permease;protein_id=WP_015728548.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 15242 16840 . - . ID=gene-CYJ02_RS09820;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09820;old_locus_tag=CYJ02_09820 NZ_PJUQ01000022.1 Protein Homology CDS 15242 16840 . - 0 ID=cds-WP_198586549.1;Parent=gene-CYJ02_RS09820;Dbxref=GenBank:WP_198586549.1;Name=WP_198586549.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=CYJ02_RS09820;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_198586549.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 17078 18373 . - . ID=gene-CYJ02_RS09825;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=CYJ02_RS09825;old_locus_tag=CYJ02_09825 NZ_PJUQ01000022.1 Protein Homology CDS 17078 18373 . - 0 ID=cds-WP_101431634.1;Parent=gene-CYJ02_RS09825;Dbxref=GenBank:WP_101431634.1;Name=WP_101431634.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614881.1;locus_tag=CYJ02_RS09825;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_101431634.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 18376 19185 . - . ID=gene-CYJ02_RS09830;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=CYJ02_RS09830;old_locus_tag=CYJ02_09830 NZ_PJUQ01000022.1 Protein Homology CDS 18376 19185 . - 0 ID=cds-WP_416351007.1;Parent=gene-CYJ02_RS09830;Dbxref=GenBank:WP_416351007.1;Name=WP_416351007.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167820.1;locus_tag=CYJ02_RS09830;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_416351007.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 19204 20013 . - . ID=gene-CYJ02_RS09835;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=CYJ02_RS09835;old_locus_tag=CYJ02_09835 NZ_PJUQ01000022.1 Protein Homology CDS 19204 20013 . - 0 ID=cds-WP_101431636.1;Parent=gene-CYJ02_RS09835;Dbxref=GenBank:WP_101431636.1;Name=WP_101431636.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614883.1;locus_tag=CYJ02_RS09835;product=histidine racemase CntK;protein_id=WP_101431636.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 20379 21101 . - . ID=gene-CYJ02_RS09840;Name=CYJ02_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09840;old_locus_tag=CYJ02_09840 NZ_PJUQ01000022.1 Protein Homology CDS 20379 21101 . - 0 ID=cds-WP_101431637.1;Parent=gene-CYJ02_RS09840;Dbxref=GenBank:WP_101431637.1;Name=WP_101431637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614884.1;locus_tag=CYJ02_RS09840;product=hypothetical protein;protein_id=WP_101431637.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 21445 22182 . + . ID=gene-CYJ02_RS09845;Name=CYJ02_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09845;old_locus_tag=CYJ02_09845 NZ_PJUQ01000022.1 Protein Homology CDS 21445 22182 . + 0 ID=cds-WP_225549879.1;Parent=gene-CYJ02_RS09845;Dbxref=GenBank:WP_225549879.1;Name=WP_225549879.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614885.1;locus_tag=CYJ02_RS09845;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_225549879.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 22188 23573 . + . ID=gene-CYJ02_RS09850;Name=CYJ02_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09850;old_locus_tag=CYJ02_09850 NZ_PJUQ01000022.1 Protein Homology CDS 22188 23573 . + 0 ID=cds-WP_014614886.1;Parent=gene-CYJ02_RS09850;Dbxref=GenBank:WP_014614886.1;Name=WP_014614886.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614886.1;locus_tag=CYJ02_RS09850;product=APC family permease;protein_id=WP_014614886.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 23817 25871 . - . ID=gene-CYJ02_RS09855;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ02_RS09855;old_locus_tag=CYJ02_09855 NZ_PJUQ01000022.1 Protein Homology CDS 23817 25871 . - 0 ID=cds-WP_100006664.1;Parent=gene-CYJ02_RS09855;Dbxref=GenBank:WP_100006664.1;Name=WP_100006664.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614887.1;locus_tag=CYJ02_RS09855;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_100006664.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 26530 28482 . - . ID=gene-CYJ02_RS09860;Name=spsN;gbkey=Gene;gene=spsN;gene_biotype=protein_coding;locus_tag=CYJ02_RS09860;old_locus_tag=CYJ02_09860 NZ_PJUQ01000022.1 Protein Homology CDS 26530 28482 . - 0 ID=cds-WP_063279061.1;Parent=gene-CYJ02_RS09860;Dbxref=GenBank:WP_063279061.1;Name=WP_063279061.1;gbkey=CDS;gene=spsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614888.1;locus_tag=CYJ02_RS09860;product=LPXTG-anchored surface protein SpsN;protein_id=WP_063279061.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 29497 30327 . + . ID=gene-CYJ02_RS09865;Name=CYJ02_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09865;old_locus_tag=CYJ02_09865 NZ_PJUQ01000022.1 Protein Homology CDS 29497 30327 . + 0 ID=cds-WP_063279062.1;Parent=gene-CYJ02_RS09865;Dbxref=GenBank:WP_063279062.1;Name=WP_063279062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614889.1;locus_tag=CYJ02_RS09865;product=thermonuclease family protein;protein_id=WP_063279062.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 30737 31651 . + . ID=gene-CYJ02_RS09870;Name=CYJ02_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09870;old_locus_tag=CYJ02_09870 NZ_PJUQ01000022.1 Protein Homology CDS 30737 31651 . + 0 ID=cds-WP_101431638.1;Parent=gene-CYJ02_RS09870;Dbxref=GenBank:WP_101431638.1;Name=WP_101431638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614890.1;locus_tag=CYJ02_RS09870;product=TDT family transporter;protein_id=WP_101431638.1;transl_table=11 NZ_PJUQ01000022.1 RefSeq gene 32059 32910 . - . ID=gene-CYJ02_RS09875;Name=CYJ02_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09875;old_locus_tag=CYJ02_09875 NZ_PJUQ01000022.1 Protein Homology CDS 32059 32910 . - 0 ID=cds-WP_159461111.1;Parent=gene-CYJ02_RS09875;Dbxref=GenBank:WP_159461111.1;Name=WP_159461111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=CYJ02_RS09875;product=Abi family protein;protein_id=WP_159461111.1;transl_table=11 ##sequence-region NZ_PJUQ01000023.1 1 33947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000023.1 RefSeq region 1 33947 . + . ID=NZ_PJUQ01000023.1:1..33947;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000023.1 RefSeq pseudogene 18 362 . - . ID=gene-CYJ02_RS09885;Name=CYJ02_RS09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS09885;old_locus_tag=CYJ02_09885;partial=true;pseudo=true;start_range=.,18 NZ_PJUQ01000023.1 Protein Homology CDS 18 362 . - 0 ID=cds-CYJ02_RS09885;Parent=gene-CYJ02_RS09885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613032.1;locus_tag=CYJ02_RS09885;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,18;transl_table=11 NZ_PJUQ01000023.1 RefSeq pseudogene 1142 1963 . - . ID=gene-CYJ02_RS09890;Name=CYJ02_RS09890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS09890;old_locus_tag=CYJ02_09890;pseudo=true NZ_PJUQ01000023.1 Protein Homology CDS 1142 1963 . - 0 ID=cds-CYJ02_RS09890;Parent=gene-CYJ02_RS09890;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219492.1;locus_tag=CYJ02_RS09890;product=metallophosphoesterase;pseudo=true;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 2262 2441 . - . ID=gene-CYJ02_RS09895;Name=CYJ02_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09895;old_locus_tag=CYJ02_09895 NZ_PJUQ01000023.1 Protein Homology CDS 2262 2441 . - 0 ID=cds-WP_014613030.1;Parent=gene-CYJ02_RS09895;Dbxref=GenBank:WP_014613030.1;Name=WP_014613030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613030.1;locus_tag=CYJ02_RS09895;product=hypothetical protein;protein_id=WP_014613030.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 3001 4032 . + . ID=gene-CYJ02_RS09900;Name=CYJ02_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09900;old_locus_tag=CYJ02_09900 NZ_PJUQ01000023.1 Protein Homology CDS 3001 4032 . + 0 ID=cds-WP_014613028.1;Parent=gene-CYJ02_RS09900;Dbxref=GenBank:WP_014613028.1;Name=WP_014613028.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=CYJ02_RS09900;product=PTS sugar transporter subunit IIC;protein_id=WP_014613028.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 4047 4724 . + . ID=gene-CYJ02_RS09905;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09905;old_locus_tag=CYJ02_09905 NZ_PJUQ01000023.1 Protein Homology CDS 4047 4724 . + 0 ID=cds-WP_020219491.1;Parent=gene-CYJ02_RS09905;Dbxref=GenBank:WP_020219491.1;Name=WP_020219491.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219491.1;locus_tag=CYJ02_RS09905;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_020219491.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 4740 5639 . + . ID=gene-CYJ02_RS09910;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09910;old_locus_tag=CYJ02_09910 NZ_PJUQ01000023.1 Protein Homology CDS 4740 5639 . + 0 ID=cds-WP_020219490.1;Parent=gene-CYJ02_RS09910;Dbxref=GenBank:WP_020219490.1;Name=WP_020219490.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=CYJ02_RS09910;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_020219490.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 6025 6282 . - . ID=gene-CYJ02_RS09915;Name=CYJ02_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09915;old_locus_tag=CYJ02_09915 NZ_PJUQ01000023.1 Protein Homology CDS 6025 6282 . - 0 ID=cds-WP_014613025.1;Parent=gene-CYJ02_RS09915;Dbxref=GenBank:WP_014613025.1;Name=WP_014613025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613025.1;locus_tag=CYJ02_RS09915;product=hypothetical protein;protein_id=WP_014613025.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 6600 7493 . - . ID=gene-CYJ02_RS09920;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ02_RS09920;old_locus_tag=CYJ02_09920 NZ_PJUQ01000023.1 Protein Homology CDS 6600 7493 . - 0 ID=cds-WP_014613024.1;Parent=gene-CYJ02_RS09920;Dbxref=GenBank:WP_014613024.1;Name=WP_014613024.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613024.1;locus_tag=CYJ02_RS09920;product=oligopeptide ABC transporter permease;protein_id=WP_014613024.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 7505 8467 . - . ID=gene-CYJ02_RS09925;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ02_RS09925;old_locus_tag=CYJ02_09925 NZ_PJUQ01000023.1 Protein Homology CDS 7505 8467 . - 0 ID=cds-WP_014613023.1;Parent=gene-CYJ02_RS09925;Dbxref=GenBank:WP_014613023.1;Name=WP_014613023.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ02_RS09925;product=oligopeptide ABC transporter permease;protein_id=WP_014613023.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 8464 9453 . - . ID=gene-CYJ02_RS09930;Name=CYJ02_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09930;old_locus_tag=CYJ02_09930 NZ_PJUQ01000023.1 Protein Homology CDS 8464 9453 . - 0 ID=cds-WP_101431639.1;Parent=gene-CYJ02_RS09930;Dbxref=GenBank:WP_101431639.1;Name=WP_101431639.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613017.1;locus_tag=CYJ02_RS09930;product=ABC transporter ATP-binding protein;protein_id=WP_101431639.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 9450 10457 . - . ID=gene-CYJ02_RS09935;Name=CYJ02_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09935;old_locus_tag=CYJ02_09935 NZ_PJUQ01000023.1 Protein Homology CDS 9450 10457 . - 0 ID=cds-WP_101431640.1;Parent=gene-CYJ02_RS09935;Dbxref=GenBank:WP_101431640.1;Name=WP_101431640.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613021.1;locus_tag=CYJ02_RS09935;product=ABC transporter ATP-binding protein;protein_id=WP_101431640.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 10586 12310 . - . ID=gene-CYJ02_RS09940;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ02_RS09940;old_locus_tag=CYJ02_09940 NZ_PJUQ01000023.1 Protein Homology CDS 10586 12310 . - 0 ID=cds-WP_101431641.1;Parent=gene-CYJ02_RS09940;Dbxref=GenBank:WP_101431641.1;Name=WP_101431641.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613015.1;locus_tag=CYJ02_RS09940;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_101431641.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq pseudogene 12604 13262 . - . ID=gene-CYJ02_RS09945;Name=CYJ02_RS09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS09945;old_locus_tag=CYJ02_09945;pseudo=true NZ_PJUQ01000023.1 Protein Homology CDS 12604 13262 . - 0 ID=cds-CYJ02_RS09945;Parent=gene-CYJ02_RS09945;Note=frameshifted;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169536.1;locus_tag=CYJ02_RS09945;product=NAD(P)-binding oxidoreductase;pseudo=true;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 13865 14626 . - . ID=gene-CYJ02_RS09950;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09950;old_locus_tag=CYJ02_09950 NZ_PJUQ01000023.1 Protein Homology CDS 13865 14626 . - 0 ID=cds-WP_014613012.1;Parent=gene-CYJ02_RS09950;Dbxref=GenBank:WP_014613012.1;Name=WP_014613012.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166512.1;locus_tag=CYJ02_RS09950;product=pyruvate formate-lyase-activating protein;protein_id=WP_014613012.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 14685 16934 . - . ID=gene-CYJ02_RS09955;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CYJ02_RS09955;old_locus_tag=CYJ02_09955 NZ_PJUQ01000023.1 Protein Homology CDS 14685 16934 . - 0 ID=cds-WP_014613011.1;Parent=gene-CYJ02_RS09955;Dbxref=GenBank:WP_014613011.1;Name=WP_014613011.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169534.1;locus_tag=CYJ02_RS09955;product=formate C-acetyltransferase;protein_id=WP_014613011.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 17231 18301 . - . ID=gene-CYJ02_RS09960;Name=CYJ02_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09960;old_locus_tag=CYJ02_09960 NZ_PJUQ01000023.1 Protein Homology CDS 17231 18301 . - 0 ID=cds-WP_014613010.1;Parent=gene-CYJ02_RS09960;Dbxref=GenBank:WP_014613010.1;Name=WP_014613010.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219481.1;locus_tag=CYJ02_RS09960;product=PTS sugar transporter subunit IIC;protein_id=WP_014613010.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 18622 19701 . - . ID=gene-CYJ02_RS13165;Name=CYJ02_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13165;old_locus_tag=CYJ02_09965 NZ_PJUQ01000023.1 Protein Homology CDS 18622 19701 . - 0 ID=cds-WP_101431642.1;Parent=gene-CYJ02_RS13165;Dbxref=GenBank:WP_101431642.1;Name=WP_101431642.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613009.1;locus_tag=CYJ02_RS13165;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_101431642.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 20229 20903 . + . ID=gene-CYJ02_RS09970;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09970;old_locus_tag=CYJ02_09970 NZ_PJUQ01000023.1 Protein Homology CDS 20229 20903 . + 0 ID=cds-WP_014613008.1;Parent=gene-CYJ02_RS09970;Dbxref=GenBank:WP_014613008.1;Name=WP_014613008.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166508.1;locus_tag=CYJ02_RS09970;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_014613008.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 20975 21508 . - . ID=gene-CYJ02_RS09975;Name=CYJ02_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09975;old_locus_tag=CYJ02_09975 NZ_PJUQ01000023.1 Protein Homology CDS 20975 21508 . - 0 ID=cds-WP_014613007.1;Parent=gene-CYJ02_RS09975;Dbxref=GenBank:WP_014613007.1;Name=WP_014613007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166507.1;locus_tag=CYJ02_RS09975;product=LURP-one-related family protein;protein_id=WP_014613007.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 21513 22658 . - . ID=gene-CYJ02_RS09980;Name=CYJ02_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09980;old_locus_tag=CYJ02_09980 NZ_PJUQ01000023.1 Protein Homology CDS 21513 22658 . - 0 ID=cds-WP_101431643.1;Parent=gene-CYJ02_RS09980;Dbxref=GenBank:WP_101431643.1;Name=WP_101431643.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169529.1;locus_tag=CYJ02_RS09980;product=glycerate kinase family protein;protein_id=WP_101431643.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 22829 23425 . - . ID=gene-CYJ02_RS09985;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=CYJ02_RS09985;old_locus_tag=CYJ02_09985 NZ_PJUQ01000023.1 Protein Homology CDS 22829 23425 . - 0 ID=cds-WP_065520356.1;Parent=gene-CYJ02_RS09985;Dbxref=GenBank:WP_065520356.1;Name=WP_065520356.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219480.1;locus_tag=CYJ02_RS09985;product=class A sortase SrtA;protein_id=WP_065520356.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 23811 25076 . - . ID=gene-CYJ02_RS09990;Name=CYJ02_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09990;old_locus_tag=CYJ02_09990 NZ_PJUQ01000023.1 Protein Homology CDS 23811 25076 . - 0 ID=cds-WP_014613004.1;Parent=gene-CYJ02_RS09990;Dbxref=GenBank:WP_014613004.1;Name=WP_014613004.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613004.1;locus_tag=CYJ02_RS09990;product=MFS transporter;protein_id=WP_014613004.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 25317 26498 . - . ID=gene-CYJ02_RS09995;Name=CYJ02_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS09995;old_locus_tag=CYJ02_09995 NZ_PJUQ01000023.1 Protein Homology CDS 25317 26498 . - 0 ID=cds-WP_101431644.1;Parent=gene-CYJ02_RS09995;Dbxref=GenBank:WP_101431644.1;Name=WP_101431644.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166503.1;locus_tag=CYJ02_RS09995;product=MFS transporter;protein_id=WP_101431644.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 27014 28969 . + . ID=gene-CYJ02_RS10000;Name=CYJ02_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10000;old_locus_tag=CYJ02_10000 NZ_PJUQ01000023.1 Protein Homology CDS 27014 28969 . + 0 ID=cds-WP_037542294.1;Parent=gene-CYJ02_RS10000;Dbxref=GenBank:WP_037542294.1;Name=WP_037542294.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499540.1;locus_tag=CYJ02_RS10000;product=fructose-bisphosphatase class III;protein_id=WP_037542294.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 30401 31795 . + . ID=gene-CYJ02_RS10005;Name=CYJ02_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10005;old_locus_tag=CYJ02_10005 NZ_PJUQ01000023.1 Protein Homology CDS 30401 31795 . + 0 ID=cds-WP_014613001.1;Parent=gene-CYJ02_RS10005;Dbxref=GenBank:WP_014613001.1;Name=WP_014613001.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166345.1;locus_tag=CYJ02_RS10005;product=alanine/glycine:cation symporter family protein;protein_id=WP_014613001.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 32152 32583 . + . ID=gene-CYJ02_RS10010;Name=CYJ02_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10010;old_locus_tag=CYJ02_10010 NZ_PJUQ01000023.1 Protein Homology CDS 32152 32583 . + 0 ID=cds-WP_031253602.1;Parent=gene-CYJ02_RS10010;Dbxref=GenBank:WP_031253602.1;Name=WP_031253602.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=CYJ02_RS10010;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_031253602.1;transl_table=11 NZ_PJUQ01000023.1 RefSeq gene 33131 33871 . + . ID=gene-CYJ02_RS10020;Name=CYJ02_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10020;old_locus_tag=CYJ02_10020 NZ_PJUQ01000023.1 Protein Homology CDS 33131 33871 . + 0 ID=cds-WP_101431645.1;Parent=gene-CYJ02_RS10020;Dbxref=GenBank:WP_101431645.1;Name=WP_101431645.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166342.1;locus_tag=CYJ02_RS10020;product=MerR family transcriptional regulator;protein_id=WP_101431645.1;transl_table=11 ##sequence-region NZ_PJUQ01000024.1 1 41240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000024.1 RefSeq region 1 41240 . + . ID=NZ_PJUQ01000024.1:1..41240;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000024.1 RefSeq gene 1 426 . - . ID=gene-CYJ02_RS10025;Name=CYJ02_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10025;old_locus_tag=CYJ02_10025;partial=true;start_range=.,1 NZ_PJUQ01000024.1 Protein Homology CDS 1 426 . - 0 ID=cds-WP_198586553.1;Parent=gene-CYJ02_RS10025;Dbxref=GenBank:WP_198586553.1;Name=WP_198586553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=CYJ02_RS10025;partial=true;product=ABC transporter permease;protein_id=WP_198586553.1;start_range=.,1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 423 1160 . - . ID=gene-CYJ02_RS10030;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10030;old_locus_tag=CYJ02_10030 NZ_PJUQ01000024.1 Protein Homology CDS 423 1160 . - 0 ID=cds-WP_014613554.1;Parent=gene-CYJ02_RS10030;Dbxref=GenBank:WP_014613554.1;Name=WP_014613554.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168023.1;locus_tag=CYJ02_RS10030;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_014613554.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 1296 1721 . + . ID=gene-CYJ02_RS10035;Name=CYJ02_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10035;old_locus_tag=CYJ02_10035 NZ_PJUQ01000024.1 Protein Homology CDS 1296 1721 . + 0 ID=cds-WP_063279146.1;Parent=gene-CYJ02_RS10035;Dbxref=GenBank:WP_063279146.1;Name=WP_063279146.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=CYJ02_RS10035;product=HIT family protein;protein_id=WP_063279146.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 1799 2155 . + . ID=gene-CYJ02_RS10040;Name=CYJ02_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10040;old_locus_tag=CYJ02_10040 NZ_PJUQ01000024.1 Protein Homology CDS 1799 2155 . + 0 ID=cds-WP_014613552.1;Parent=gene-CYJ02_RS10040;Dbxref=GenBank:WP_014613552.1;Name=WP_014613552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=CYJ02_RS10040;product=YtxH domain-containing protein;protein_id=WP_014613552.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 2257 2787 . + . ID=gene-CYJ02_RS10045;Name=CYJ02_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10045;old_locus_tag=CYJ02_10045 NZ_PJUQ01000024.1 Protein Homology CDS 2257 2787 . + 0 ID=cds-WP_096548917.1;Parent=gene-CYJ02_RS10045;Dbxref=GenBank:WP_096548917.1;Name=WP_096548917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=CYJ02_RS10045;product=HTH-type transcriptional regulator Hpr;protein_id=WP_096548917.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 2836 3402 . + . ID=gene-CYJ02_RS10050;Name=CYJ02_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10050;old_locus_tag=CYJ02_10050 NZ_PJUQ01000024.1 Protein Homology CDS 2836 3402 . + 0 ID=cds-WP_015729361.1;Parent=gene-CYJ02_RS10050;Dbxref=GenBank:WP_015729361.1;Name=WP_015729361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729361.1;locus_tag=CYJ02_RS10050;product=DUF3267 domain-containing protein;protein_id=WP_015729361.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq pseudogene 3723 3899 . + . ID=gene-CYJ02_RS12815;Name=CYJ02_RS12815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12815;partial=true;pseudo=true;start_range=.,3723 NZ_PJUQ01000024.1 Protein Homology CDS 3723 3899 . + 0 ID=cds-CYJ02_RS12815;Parent=gene-CYJ02_RS12815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.7;locus_tag=CYJ02_RS12815;partial=true;product=MFS transporter;pseudo=true;start_range=.,3723;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 4083 5039 . + . ID=gene-CYJ02_RS10055;Name=CYJ02_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10055;old_locus_tag=CYJ02_10055 NZ_PJUQ01000024.1 Protein Homology CDS 4083 5039 . + 0 ID=cds-WP_014613548.1;Parent=gene-CYJ02_RS10055;Dbxref=GenBank:WP_014613548.1;Name=WP_014613548.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168017.1;locus_tag=CYJ02_RS10055;product=peptidylprolyl isomerase;protein_id=WP_014613548.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 5249 6190 . - . ID=gene-CYJ02_RS10060;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=CYJ02_RS10060;old_locus_tag=CYJ02_10060 NZ_PJUQ01000024.1 Protein Homology CDS 5249 6190 . - 0 ID=cds-WP_014613547.1;Parent=gene-CYJ02_RS10060;Dbxref=GenBank:WP_014613547.1;Name=WP_014613547.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CYJ02_RS10060;product=3'-5' exoribonuclease YhaM;protein_id=WP_014613547.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 6209 9133 . - . ID=gene-CYJ02_RS10065;Name=CYJ02_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10065;old_locus_tag=CYJ02_10065 NZ_PJUQ01000024.1 Protein Homology CDS 6209 9133 . - 0 ID=cds-WP_101431646.1;Parent=gene-CYJ02_RS10065;Dbxref=GenBank:WP_101431646.1;Name=WP_101431646.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=CYJ02_RS10065;product=AAA family ATPase;protein_id=WP_101431646.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 9137 10324 . - . ID=gene-CYJ02_RS10070;Name=CYJ02_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10070;old_locus_tag=CYJ02_10070 NZ_PJUQ01000024.1 Protein Homology CDS 9137 10324 . - 0 ID=cds-WP_014613545.1;Parent=gene-CYJ02_RS10070;Dbxref=GenBank:WP_014613545.1;Name=WP_014613545.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=CYJ02_RS10070;product=metallophosphoesterase family protein;protein_id=WP_014613545.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 10578 10922 . - . ID=gene-CYJ02_RS10075;Name=CYJ02_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10075;old_locus_tag=CYJ02_10075 NZ_PJUQ01000024.1 Protein Homology CDS 10578 10922 . - 0 ID=cds-WP_014613544.1;Parent=gene-CYJ02_RS10075;Dbxref=GenBank:WP_014613544.1;Name=WP_014613544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CYJ02_RS10075;product=YlbF/YmcA family competence regulator;protein_id=WP_014613544.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 11011 12141 . - . ID=gene-CYJ02_RS10080;Name=CYJ02_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10080;old_locus_tag=CYJ02_10080 NZ_PJUQ01000024.1 Protein Homology CDS 11011 12141 . - 0 ID=cds-WP_065354145.1;Parent=gene-CYJ02_RS10080;Dbxref=GenBank:WP_065354145.1;Name=WP_065354145.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168012.1;locus_tag=CYJ02_RS10080;product=DUF445 domain-containing protein;protein_id=WP_065354145.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 12366 12830 . - . ID=gene-CYJ02_RS10085;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10085;old_locus_tag=CYJ02_10085 NZ_PJUQ01000024.1 Protein Homology CDS 12366 12830 . - 0 ID=cds-WP_014613542.1;Parent=gene-CYJ02_RS10085;Dbxref=GenBank:WP_014613542.1;Name=WP_014613542.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=CYJ02_RS10085;product=XRE family transcriptional regulator XdrA;protein_id=WP_014613542.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 14696 15580 . - . ID=gene-CYJ02_RS10095;Name=CYJ02_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10095;old_locus_tag=CYJ02_10095 NZ_PJUQ01000024.1 Protein Homology CDS 14696 15580 . - 0 ID=cds-WP_037542692.1;Parent=gene-CYJ02_RS10095;Dbxref=GenBank:WP_037542692.1;Name=WP_037542692.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613541.1;locus_tag=CYJ02_RS10095;product=cation diffusion facilitator family transporter;protein_id=WP_037542692.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 15776 17062 . + . ID=gene-CYJ02_RS10100;Name=CYJ02_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10100;old_locus_tag=CYJ02_10100 NZ_PJUQ01000024.1 Protein Homology CDS 15776 17062 . + 0 ID=cds-WP_101431647.1;Parent=gene-CYJ02_RS10100;Dbxref=GenBank:WP_101431647.1;Name=WP_101431647.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=CYJ02_RS10100;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_101431647.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 17212 17838 . - . ID=gene-CYJ02_RS10105;Name=CYJ02_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10105;old_locus_tag=CYJ02_10105 NZ_PJUQ01000024.1 Protein Homology CDS 17212 17838 . - 0 ID=cds-WP_037542690.1;Parent=gene-CYJ02_RS10105;Dbxref=GenBank:WP_037542690.1;Name=WP_037542690.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613539.1;locus_tag=CYJ02_RS10105;product=response regulator;protein_id=WP_037542690.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 17838 18962 . - . ID=gene-CYJ02_RS10110;Name=CYJ02_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10110;old_locus_tag=CYJ02_10110 NZ_PJUQ01000024.1 Protein Homology CDS 17838 18962 . - 0 ID=cds-WP_101431648.1;Parent=gene-CYJ02_RS10110;Dbxref=GenBank:WP_101431648.1;Name=WP_101431648.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729365.1;locus_tag=CYJ02_RS10110;product=GAF domain-containing sensor histidine kinase;protein_id=WP_101431648.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 19116 19946 . + . ID=gene-CYJ02_RS10115;Name=CYJ02_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10115;old_locus_tag=CYJ02_10115 NZ_PJUQ01000024.1 Protein Homology CDS 19116 19946 . + 0 ID=cds-WP_101431649.1;Parent=gene-CYJ02_RS10115;Dbxref=GenBank:WP_101431649.1;Name=WP_101431649.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=CYJ02_RS10115;product=RluA family pseudouridine synthase;protein_id=WP_101431649.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 20014 22176 . - . ID=gene-CYJ02_RS10120;Name=CYJ02_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10120;old_locus_tag=CYJ02_10120 NZ_PJUQ01000024.1 Protein Homology CDS 20014 22176 . - 0 ID=cds-WP_370498991.1;Parent=gene-CYJ02_RS10120;Dbxref=GenBank:WP_370498991.1;Name=WP_370498991.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425465.1;locus_tag=CYJ02_RS10120;product=RNA degradosome polyphosphate kinase;protein_id=WP_370498991.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 22258 23784 . - . ID=gene-CYJ02_RS10125;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CYJ02_RS10125;old_locus_tag=CYJ02_10125 NZ_PJUQ01000024.1 Protein Homology CDS 22258 23784 . - 0 ID=cds-WP_070407788.1;Parent=gene-CYJ02_RS10125;Dbxref=GenBank:WP_070407788.1;Name=WP_070407788.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613535.1;locus_tag=CYJ02_RS10125;product=exopolyphosphatase;protein_id=WP_070407788.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 23805 25190 . - . ID=gene-CYJ02_RS10130;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10130;old_locus_tag=CYJ02_10130 NZ_PJUQ01000024.1 Protein Homology CDS 23805 25190 . - 0 ID=cds-WP_014613534.1;Parent=gene-CYJ02_RS10130;Dbxref=GenBank:WP_014613534.1;Name=WP_014613534.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CYJ02_RS10130;product=class II fumarate hydratase;protein_id=WP_014613534.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 25420 25863 . - . ID=gene-CYJ02_RS10135;Name=CYJ02_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10135;old_locus_tag=CYJ02_10135 NZ_PJUQ01000024.1 Protein Homology CDS 25420 25863 . - 0 ID=cds-WP_037542685.1;Parent=gene-CYJ02_RS10135;Dbxref=GenBank:WP_037542685.1;Name=WP_037542685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164970.1;locus_tag=CYJ02_RS10135;product=hypothetical protein;protein_id=WP_037542685.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 25984 26145 . - . ID=gene-CYJ02_RS12555;Name=CYJ02_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12555 NZ_PJUQ01000024.1 Protein Homology CDS 25984 26145 . - 0 ID=cds-WP_014613532.1;Parent=gene-CYJ02_RS12555;Dbxref=GenBank:WP_014613532.1;Name=WP_014613532.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=CYJ02_RS12555;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_014613532.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 26166 26765 . - . ID=gene-CYJ02_RS10140;Name=CYJ02_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10140;old_locus_tag=CYJ02_10140 NZ_PJUQ01000024.1 Protein Homology CDS 26166 26765 . - 0 ID=cds-WP_101431650.1;Parent=gene-CYJ02_RS10140;Dbxref=GenBank:WP_101431650.1;Name=WP_101431650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167999.1;locus_tag=CYJ02_RS10140;product=6-phosphogluconolactonase;protein_id=WP_101431650.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 26958 27428 . - . ID=gene-CYJ02_RS10145;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CYJ02_RS10145;old_locus_tag=CYJ02_10145 NZ_PJUQ01000024.1 Protein Homology CDS 26958 27428 . - 0 ID=cds-WP_014613530.1;Parent=gene-CYJ02_RS10145;Dbxref=GenBank:WP_014613530.1;Name=WP_014613530.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=CYJ02_RS10145;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014613530.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 27428 28558 . - . ID=gene-CYJ02_RS10150;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CYJ02_RS10150;old_locus_tag=CYJ02_10150 NZ_PJUQ01000024.1 Protein Homology CDS 27428 28558 . - 0 ID=cds-WP_015729368.1;Parent=gene-CYJ02_RS10150;Dbxref=GenBank:WP_015729368.1;Name=WP_015729368.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613529.1;locus_tag=CYJ02_RS10150;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_015729368.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 28714 29439 . - . ID=gene-CYJ02_RS10155;Name=CYJ02_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10155;old_locus_tag=CYJ02_10155 NZ_PJUQ01000024.1 Protein Homology CDS 28714 29439 . - 0 ID=cds-WP_015729369.1;Parent=gene-CYJ02_RS10155;Dbxref=GenBank:WP_015729369.1;Name=WP_015729369.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613528.1;locus_tag=CYJ02_RS10155;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_015729369.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 29432 30892 . - . ID=gene-CYJ02_RS10160;Name=CYJ02_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10160;old_locus_tag=CYJ02_10160 NZ_PJUQ01000024.1 Protein Homology CDS 29432 30892 . - 0 ID=cds-WP_101431651.1;Parent=gene-CYJ02_RS10160;Dbxref=GenBank:WP_101431651.1;Name=WP_101431651.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470402.1;locus_tag=CYJ02_RS10160;product=ABC transporter substrate-binding protein/permease;protein_id=WP_101431651.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 31078 32136 . - . ID=gene-CYJ02_RS10165;Name=CYJ02_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10165;old_locus_tag=CYJ02_10165 NZ_PJUQ01000024.1 Protein Homology CDS 31078 32136 . - 0 ID=cds-WP_014613526.1;Parent=gene-CYJ02_RS10165;Dbxref=GenBank:WP_014613526.1;Name=WP_014613526.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613526.1;locus_tag=CYJ02_RS10165;product=PTS sugar transporter subunit IIC;protein_id=WP_014613526.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 32732 32815 . - . ID=gene-CYJ02_RS10170;Name=CYJ02_RS10170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10170;old_locus_tag=CYJ02_10170 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 32732 32815 . - . ID=rna-CYJ02_RS10170;Parent=gene-CYJ02_RS10170;anticodon=(pos:complement(32779..32781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10170;product=tRNA-Leu NZ_PJUQ01000024.1 tRNAscan-SE exon 32732 32815 . - . ID=exon-CYJ02_RS10170-1;Parent=rna-CYJ02_RS10170;anticodon=(pos:complement(32779..32781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10170;product=tRNA-Leu NZ_PJUQ01000024.1 RefSeq gene 33448 33633 . - . ID=gene-CYJ02_RS10180;Name=CYJ02_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10180;old_locus_tag=CYJ02_10180 NZ_PJUQ01000024.1 Protein Homology CDS 33448 33633 . - 0 ID=cds-WP_232208795.1;Parent=gene-CYJ02_RS10180;Dbxref=GenBank:WP_232208795.1;Name=WP_232208795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454683.1;locus_tag=CYJ02_RS10180;product=hypothetical protein;protein_id=WP_232208795.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 33838 34008 . - . ID=gene-CYJ02_RS10185;Name=CYJ02_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10185;old_locus_tag=CYJ02_10185 NZ_PJUQ01000024.1 GeneMarkS-2+ CDS 33838 34008 . - 0 ID=cds-WP_179300498.1;Parent=gene-CYJ02_RS10185;Dbxref=GenBank:WP_179300498.1;Name=WP_179300498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS10185;product=hypothetical protein;protein_id=WP_179300498.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq pseudogene 34117 35040 . - . ID=gene-CYJ02_RS10190;Name=CYJ02_RS10190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS10190;old_locus_tag=CYJ02_10190;pseudo=true NZ_PJUQ01000024.1 Protein Homology CDS 34117 35040 . - 0 ID=cds-CYJ02_RS10190;Parent=gene-CYJ02_RS10190;Note=internal stop;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458419.1;locus_tag=CYJ02_RS10190;product=peptidoglycan recognition protein family protein;pseudo=true;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 35580 35771 . - . ID=gene-CYJ02_RS10200;Name=CYJ02_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10200;old_locus_tag=CYJ02_10200 NZ_PJUQ01000024.1 Protein Homology CDS 35580 35771 . - 0 ID=cds-WP_063279149.1;Parent=gene-CYJ02_RS10200;Dbxref=GenBank:WP_063279149.1;Name=WP_063279149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613521.1;locus_tag=CYJ02_RS10200;product=hypothetical protein;protein_id=WP_063279149.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 35811 36209 . - . ID=gene-CYJ02_RS10205;Name=CYJ02_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10205;old_locus_tag=CYJ02_10205 NZ_PJUQ01000024.1 GeneMarkS-2+ CDS 35811 36209 . - 0 ID=cds-WP_070407783.1;Parent=gene-CYJ02_RS10205;Dbxref=GenBank:WP_070407783.1;Name=WP_070407783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS10205;product=hypothetical protein;protein_id=WP_070407783.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 36221 36751 . - . ID=gene-CYJ02_RS10210;Name=CYJ02_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10210;old_locus_tag=CYJ02_10210 NZ_PJUQ01000024.1 Protein Homology CDS 36221 36751 . - 0 ID=cds-WP_101431652.1;Parent=gene-CYJ02_RS10210;Dbxref=GenBank:WP_101431652.1;Name=WP_101431652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613519.1;locus_tag=CYJ02_RS10210;product=phage upper tail fiber protein;protein_id=WP_101431652.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 36806 37153 . - . ID=gene-CYJ02_RS10215;Name=CYJ02_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10215;old_locus_tag=CYJ02_10215 NZ_PJUQ01000024.1 Protein Homology CDS 36806 37153 . - 0 ID=cds-WP_070407782.1;Parent=gene-CYJ02_RS10215;Dbxref=GenBank:WP_070407782.1;Name=WP_070407782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220229.1;locus_tag=CYJ02_RS10215;product=hypothetical protein;protein_id=WP_070407782.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 37240 37521 . - . ID=gene-CYJ02_RS10220;Name=CYJ02_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10220;old_locus_tag=CYJ02_10220 NZ_PJUQ01000024.1 Protein Homology CDS 37240 37521 . - 0 ID=cds-WP_014613517.1;Parent=gene-CYJ02_RS10220;Dbxref=GenBank:WP_014613517.1;Name=WP_014613517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613517.1;locus_tag=CYJ02_RS10220;product=phage holin;protein_id=WP_014613517.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 37988 38248 . - . ID=gene-CYJ02_RS10230;Name=CYJ02_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10230;old_locus_tag=CYJ02_10230 NZ_PJUQ01000024.1 GeneMarkS-2+ CDS 37988 38248 . - 0 ID=cds-WP_014613515.1;Parent=gene-CYJ02_RS10230;Dbxref=GenBank:WP_014613515.1;Name=WP_014613515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS10230;product=hypothetical protein;protein_id=WP_014613515.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 38315 38575 . - . ID=gene-CYJ02_RS10235;Name=CYJ02_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10235;old_locus_tag=CYJ02_10235 NZ_PJUQ01000024.1 Protein Homology CDS 38315 38575 . - 0 ID=cds-WP_014613514.1;Parent=gene-CYJ02_RS10235;Dbxref=GenBank:WP_014613514.1;Name=WP_014613514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613514.1;locus_tag=CYJ02_RS10235;product=hypothetical protein;protein_id=WP_014613514.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 38595 39005 . - . ID=gene-CYJ02_RS10240;Name=CYJ02_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10240;old_locus_tag=CYJ02_10240 NZ_PJUQ01000024.1 Protein Homology CDS 38595 39005 . - 0 ID=cds-WP_014613513.1;Parent=gene-CYJ02_RS10240;Dbxref=GenBank:WP_014613513.1;Name=WP_014613513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613513.1;locus_tag=CYJ02_RS10240;product=DUF1617 family protein;protein_id=WP_014613513.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 39634 39879 . - . ID=gene-CYJ02_RS10250;Name=CYJ02_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10250;old_locus_tag=CYJ02_10250 NZ_PJUQ01000024.1 Protein Homology CDS 39634 39879 . - 0 ID=cds-WP_014613511.1;Parent=gene-CYJ02_RS10250;Dbxref=GenBank:WP_014613511.1;Name=WP_014613511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166655.1;locus_tag=CYJ02_RS10250;product=hypothetical protein;protein_id=WP_014613511.1;transl_table=11 NZ_PJUQ01000024.1 RefSeq gene 40226 40299 . - . ID=gene-CYJ02_RS10255;Name=CYJ02_RS10255;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10255;old_locus_tag=CYJ02_10255 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40226 40299 . - . ID=rna-CYJ02_RS10255;Parent=gene-CYJ02_RS10255;anticodon=(pos:complement(40265..40267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10255;product=tRNA-Gly NZ_PJUQ01000024.1 tRNAscan-SE exon 40226 40299 . - . ID=exon-CYJ02_RS10255-1;Parent=rna-CYJ02_RS10255;anticodon=(pos:complement(40265..40267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10255;product=tRNA-Gly NZ_PJUQ01000024.1 RefSeq gene 40333 40407 . - . ID=gene-CYJ02_RS10260;Name=CYJ02_RS10260;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10260;old_locus_tag=CYJ02_10260 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40333 40407 . - . ID=rna-CYJ02_RS10260;Parent=gene-CYJ02_RS10260;anticodon=(pos:complement(40372..40374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10260;product=tRNA-Gly NZ_PJUQ01000024.1 tRNAscan-SE exon 40333 40407 . - . ID=exon-CYJ02_RS10260-1;Parent=rna-CYJ02_RS10260;anticodon=(pos:complement(40372..40374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10260;product=tRNA-Gly NZ_PJUQ01000024.1 RefSeq gene 40422 40496 . - . ID=gene-CYJ02_RS10265;Name=CYJ02_RS10265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10265;old_locus_tag=CYJ02_10265 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40422 40496 . - . ID=rna-CYJ02_RS10265;Parent=gene-CYJ02_RS10265;anticodon=(pos:complement(40462..40464));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10265;product=tRNA-Cys NZ_PJUQ01000024.1 tRNAscan-SE exon 40422 40496 . - . ID=exon-CYJ02_RS10265-1;Parent=rna-CYJ02_RS10265;anticodon=(pos:complement(40462..40464));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10265;product=tRNA-Cys NZ_PJUQ01000024.1 RefSeq gene 40505 40576 . - . ID=gene-CYJ02_RS10270;Name=CYJ02_RS10270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10270;old_locus_tag=CYJ02_10270 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40505 40576 . - . ID=rna-CYJ02_RS10270;Parent=gene-CYJ02_RS10270;anticodon=(pos:complement(40542..40544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10270;product=tRNA-Gln NZ_PJUQ01000024.1 tRNAscan-SE exon 40505 40576 . - . ID=exon-CYJ02_RS10270-1;Parent=rna-CYJ02_RS10270;anticodon=(pos:complement(40542..40544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10270;product=tRNA-Gln NZ_PJUQ01000024.1 RefSeq gene 40581 40664 . - . ID=gene-CYJ02_RS10275;Name=CYJ02_RS10275;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10275;old_locus_tag=CYJ02_10275 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40581 40664 . - . ID=rna-CYJ02_RS10275;Parent=gene-CYJ02_RS10275;anticodon=(pos:complement(40628..40630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10275;product=tRNA-Tyr NZ_PJUQ01000024.1 tRNAscan-SE exon 40581 40664 . - . ID=exon-CYJ02_RS10275-1;Parent=rna-CYJ02_RS10275;anticodon=(pos:complement(40628..40630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10275;product=tRNA-Tyr NZ_PJUQ01000024.1 RefSeq gene 40685 40760 . - . ID=gene-CYJ02_RS10280;Name=CYJ02_RS10280;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10280;old_locus_tag=CYJ02_10280 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40685 40760 . - . ID=rna-CYJ02_RS10280;Parent=gene-CYJ02_RS10280;anticodon=(pos:complement(40725..40727));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10280;product=tRNA-Val NZ_PJUQ01000024.1 tRNAscan-SE exon 40685 40760 . - . ID=exon-CYJ02_RS10280-1;Parent=rna-CYJ02_RS10280;anticodon=(pos:complement(40725..40727));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10280;product=tRNA-Val NZ_PJUQ01000024.1 RefSeq gene 40770 40841 . - . ID=gene-CYJ02_RS10285;Name=CYJ02_RS10285;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10285;old_locus_tag=CYJ02_10285 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40770 40841 . - . ID=rna-CYJ02_RS10285;Parent=gene-CYJ02_RS10285;anticodon=(pos:complement(40806..40808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10285;product=tRNA-Glu NZ_PJUQ01000024.1 tRNAscan-SE exon 40770 40841 . - . ID=exon-CYJ02_RS10285-1;Parent=rna-CYJ02_RS10285;anticodon=(pos:complement(40806..40808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10285;product=tRNA-Glu NZ_PJUQ01000024.1 RefSeq gene 40843 40917 . - . ID=gene-CYJ02_RS10290;Name=CYJ02_RS10290;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS10290;old_locus_tag=CYJ02_10290 NZ_PJUQ01000024.1 tRNAscan-SE tRNA 40843 40917 . - . ID=rna-CYJ02_RS10290;Parent=gene-CYJ02_RS10290;anticodon=(pos:complement(40883..40885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10290;product=tRNA-Asn NZ_PJUQ01000024.1 tRNAscan-SE exon 40843 40917 . - . ID=exon-CYJ02_RS10290-1;Parent=rna-CYJ02_RS10290;anticodon=(pos:complement(40883..40885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS10290;product=tRNA-Asn NZ_PJUQ01000024.1 RefSeq gene 40927 41041 . - . ID=gene-CYJ02_RS10295;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ02_RS10295;old_locus_tag=CYJ02_10295 NZ_PJUQ01000024.1 cmsearch rRNA 40927 41041 . - . ID=rna-CYJ02_RS10295;Parent=gene-CYJ02_RS10295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS10295;product=5S ribosomal RNA NZ_PJUQ01000024.1 cmsearch exon 40927 41041 . - . ID=exon-CYJ02_RS10295-1;Parent=rna-CYJ02_RS10295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS10295;product=5S ribosomal RNA NZ_PJUQ01000024.1 RefSeq gene 41123 41240 . - . ID=gene-CYJ02_RS10300;Name=CYJ02_RS10300;end_range=41240,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS10300;old_locus_tag=CYJ02_10300;partial=true NZ_PJUQ01000024.1 cmsearch rRNA 41123 41240 . - . ID=rna-CYJ02_RS10300;Parent=gene-CYJ02_RS10300;Dbxref=RFAM:RF02541;end_range=41240,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS10300;partial=true;product=23S ribosomal RNA NZ_PJUQ01000024.1 cmsearch exon 41123 41240 . - . ID=exon-CYJ02_RS10300-1;Parent=rna-CYJ02_RS10300;Dbxref=RFAM:RF02541;end_range=41240,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS10300;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PJUQ01000025.1 1 31360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000025.1 RefSeq region 1 31360 . + . ID=NZ_PJUQ01000025.1:1..31360;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000025.1 RefSeq gene 354 1355 . + . ID=gene-CYJ02_RS10305;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ02_RS10305;old_locus_tag=CYJ02_10305 NZ_PJUQ01000025.1 Protein Homology CDS 354 1355 . + 0 ID=cds-WP_169926730.1;Parent=gene-CYJ02_RS10305;Dbxref=GenBank:WP_169926730.1;Name=WP_169926730.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508858.1;locus_tag=CYJ02_RS10305;product=ornithine carbamoyltransferase;protein_id=WP_169926730.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 1469 2098 . - . ID=gene-CYJ02_RS13085;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CYJ02_RS13085;old_locus_tag=CYJ02_10310 NZ_PJUQ01000025.1 Protein Homology CDS 1469 2098 . - 0 ID=cds-WP_070407496.1;Parent=gene-CYJ02_RS13085;Dbxref=GenBank:WP_070407496.1;Name=WP_070407496.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=CYJ02_RS13085;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_070407496.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 2089 2853 . - . ID=gene-CYJ02_RS13090;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CYJ02_RS13090;old_locus_tag=CYJ02_10315 NZ_PJUQ01000025.1 Protein Homology CDS 2089 2853 . - 0 ID=cds-WP_014612895.1;Parent=gene-CYJ02_RS13090;Dbxref=GenBank:WP_014612895.1;Name=WP_014612895.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168443.1;locus_tag=CYJ02_RS13090;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_014612895.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 2850 3554 . - . ID=gene-CYJ02_RS10320;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10320;old_locus_tag=CYJ02_10320 NZ_PJUQ01000025.1 Protein Homology CDS 2850 3554 . - 0 ID=cds-WP_101431654.1;Parent=gene-CYJ02_RS10320;Dbxref=GenBank:WP_101431654.1;Name=WP_101431654.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487522.1;locus_tag=CYJ02_RS10320;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_101431654.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 3547 4122 . - . ID=gene-CYJ02_RS10325;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CYJ02_RS10325;old_locus_tag=CYJ02_10325 NZ_PJUQ01000025.1 Protein Homology CDS 3547 4122 . - 0 ID=cds-WP_101431655.1;Parent=gene-CYJ02_RS10325;Dbxref=GenBank:WP_101431655.1;Name=WP_101431655.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=CYJ02_RS10325;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_101431655.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 4119 4700 . - . ID=gene-CYJ02_RS10330;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10330;old_locus_tag=CYJ02_10330 NZ_PJUQ01000025.1 Protein Homology CDS 4119 4700 . - 0 ID=cds-WP_101431656.1;Parent=gene-CYJ02_RS10330;Dbxref=GenBank:WP_101431656.1;Name=WP_101431656.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167083.1;locus_tag=CYJ02_RS10330;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_101431656.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 4684 5697 . - . ID=gene-CYJ02_RS10335;Name=CYJ02_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10335;old_locus_tag=CYJ02_10335 NZ_PJUQ01000025.1 Protein Homology CDS 4684 5697 . - 0 ID=cds-WP_101431657.1;Parent=gene-CYJ02_RS10335;Dbxref=GenBank:WP_101431657.1;Name=WP_101431657.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=CYJ02_RS10335;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_101431657.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 5694 6953 . - . ID=gene-CYJ02_RS10340;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CYJ02_RS10340;old_locus_tag=CYJ02_10340 NZ_PJUQ01000025.1 Protein Homology CDS 5694 6953 . - 0 ID=cds-WP_101431658.1;Parent=gene-CYJ02_RS10340;Dbxref=GenBank:WP_101431658.1;Name=WP_101431658.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=CYJ02_RS10340;product=histidinol dehydrogenase;protein_id=WP_101431658.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 6943 7557 . - . ID=gene-CYJ02_RS10345;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CYJ02_RS10345;old_locus_tag=CYJ02_10345 NZ_PJUQ01000025.1 Protein Homology CDS 6943 7557 . - 0 ID=cds-WP_014612901.1;Parent=gene-CYJ02_RS10345;Dbxref=GenBank:WP_014612901.1;Name=WP_014612901.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=CYJ02_RS10345;product=ATP phosphoribosyltransferase;protein_id=WP_014612901.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 7573 8382 . - . ID=gene-CYJ02_RS10350;Name=CYJ02_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10350;old_locus_tag=CYJ02_10350 NZ_PJUQ01000025.1 Protein Homology CDS 7573 8382 . - 0 ID=cds-WP_037542205.1;Parent=gene-CYJ02_RS10350;Dbxref=GenBank:WP_037542205.1;Name=WP_037542205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=CYJ02_RS10350;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_037542205.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 8713 9375 . + . ID=gene-CYJ02_RS10355;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10355;old_locus_tag=CYJ02_10355 NZ_PJUQ01000025.1 Protein Homology CDS 8713 9375 . + 0 ID=cds-WP_014612903.1;Parent=gene-CYJ02_RS10355;Dbxref=GenBank:WP_014612903.1;Name=WP_014612903.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=CYJ02_RS10355;product=deoxyribose-phosphate aldolase;protein_id=WP_014612903.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 9409 10587 . + . ID=gene-CYJ02_RS10360;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10360;old_locus_tag=CYJ02_10360 NZ_PJUQ01000025.1 Protein Homology CDS 9409 10587 . + 0 ID=cds-WP_014612904.1;Parent=gene-CYJ02_RS10360;Dbxref=GenBank:WP_014612904.1;Name=WP_014612904.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=CYJ02_RS10360;product=phosphopentomutase;protein_id=WP_014612904.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 11063 12814 . + . ID=gene-CYJ02_RS10365;Name=CYJ02_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10365;old_locus_tag=CYJ02_10365 NZ_PJUQ01000025.1 Protein Homology CDS 11063 12814 . + 0 ID=cds-WP_096533412.1;Parent=gene-CYJ02_RS10365;Dbxref=GenBank:WP_096533412.1;Name=WP_096533412.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166488.1;locus_tag=CYJ02_RS10365;product=sensor histidine kinase;protein_id=WP_096533412.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 12818 13552 . + . ID=gene-CYJ02_RS10370;Name=CYJ02_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10370;old_locus_tag=CYJ02_10370 NZ_PJUQ01000025.1 Protein Homology CDS 12818 13552 . + 0 ID=cds-WP_014612907.1;Parent=gene-CYJ02_RS10370;Dbxref=GenBank:WP_014612907.1;Name=WP_014612907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612907.1;locus_tag=CYJ02_RS10370;product=response regulator transcription factor LytR;protein_id=WP_014612907.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 14225 14659 . + . ID=gene-CYJ02_RS10375;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10375;old_locus_tag=CYJ02_10375 NZ_PJUQ01000025.1 Protein Homology CDS 14225 14659 . + 0 ID=cds-WP_014612908.1;Parent=gene-CYJ02_RS10375;Dbxref=GenBank:WP_014612908.1;Name=WP_014612908.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612908.1;locus_tag=CYJ02_RS10375;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_014612908.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 14652 15353 . + . ID=gene-CYJ02_RS10380;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10380;old_locus_tag=CYJ02_10380 NZ_PJUQ01000025.1 Protein Homology CDS 14652 15353 . + 0 ID=cds-WP_014612909.1;Parent=gene-CYJ02_RS10380;Dbxref=GenBank:WP_014612909.1;Name=WP_014612909.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498828.1;locus_tag=CYJ02_RS10380;product=antiholin-like protein LrgB;protein_id=WP_014612909.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 15520 16482 . + . ID=gene-CYJ02_RS10385;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=CYJ02_RS10385;old_locus_tag=CYJ02_10385 NZ_PJUQ01000025.1 Protein Homology CDS 15520 16482 . + 0 ID=cds-WP_014612910.1;Parent=gene-CYJ02_RS10385;Dbxref=GenBank:WP_014612910.1;Name=WP_014612910.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=CYJ02_RS10385;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_014612910.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 16505 17086 . + . ID=gene-CYJ02_RS10390;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CYJ02_RS10390;old_locus_tag=CYJ02_10390 NZ_PJUQ01000025.1 Protein Homology CDS 16505 17086 . + 0 ID=cds-WP_014612911.1;Parent=gene-CYJ02_RS10390;Dbxref=GenBank:WP_014612911.1;Name=WP_014612911.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166492.1;locus_tag=CYJ02_RS10390;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_014612911.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 17083 17442 . + . ID=gene-CYJ02_RS10395;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=CYJ02_RS10395;old_locus_tag=CYJ02_10395 NZ_PJUQ01000025.1 Protein Homology CDS 17083 17442 . + 0 ID=cds-WP_101431659.1;Parent=gene-CYJ02_RS10395;Dbxref=GenBank:WP_101431659.1;Name=WP_101431659.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124171.1;locus_tag=CYJ02_RS10395;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_101431659.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 17509 17859 . - . ID=gene-CYJ02_RS10400;Name=CYJ02_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10400;old_locus_tag=CYJ02_10400 NZ_PJUQ01000025.1 Protein Homology CDS 17509 17859 . - 0 ID=cds-WP_015729673.1;Parent=gene-CYJ02_RS10400;Dbxref=GenBank:WP_015729673.1;Name=WP_015729673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729673.1;locus_tag=CYJ02_RS10400;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_015729673.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 18012 19400 . + . ID=gene-CYJ02_RS10405;Name=CYJ02_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10405;old_locus_tag=CYJ02_10405 NZ_PJUQ01000025.1 Protein Homology CDS 18012 19400 . + 0 ID=cds-WP_015729672.1;Parent=gene-CYJ02_RS10405;Dbxref=GenBank:WP_015729672.1;Name=WP_015729672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=CYJ02_RS10405;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_015729672.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq pseudogene 19891 20281 . - . ID=gene-CYJ02_RS10410;Name=CYJ02_RS10410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS10410;old_locus_tag=CYJ02_10410;partial=true;pseudo=true;start_range=.,19891 NZ_PJUQ01000025.1 Protein Homology CDS 19891 20281 . - 0 ID=cds-CYJ02_RS10410;Parent=gene-CYJ02_RS10410;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500456.1;locus_tag=CYJ02_RS10410;partial=true;product=DUF1828 domain-containing protein;pseudo=true;start_range=.,19891;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 20763 20924 . + . ID=gene-CYJ02_RS10415;Name=CYJ02_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10415;old_locus_tag=CYJ02_10415 NZ_PJUQ01000025.1 Protein Homology CDS 20763 20924 . + 0 ID=cds-WP_096547175.1;Parent=gene-CYJ02_RS10415;Dbxref=GenBank:WP_096547175.1;Name=WP_096547175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444967.1;locus_tag=CYJ02_RS10415;product=signal protein;protein_id=WP_096547175.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 20981 22087 . + . ID=gene-CYJ02_RS10420;Name=CYJ02_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10420;old_locus_tag=CYJ02_10420 NZ_PJUQ01000025.1 Protein Homology CDS 20981 22087 . + 0 ID=cds-WP_100007231.1;Parent=gene-CYJ02_RS10420;Dbxref=GenBank:WP_100007231.1;Name=WP_100007231.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: protein motif:HMM:NF024748.7;locus_tag=CYJ02_RS10420;product=serine hydrolase;protein_id=WP_100007231.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 22138 23094 . + . ID=gene-CYJ02_RS10425;Name=CYJ02_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10425;old_locus_tag=CYJ02_10425 NZ_PJUQ01000025.1 Protein Homology CDS 22138 23094 . + 0 ID=cds-WP_201800448.1;Parent=gene-CYJ02_RS10425;Dbxref=GenBank:WP_201800448.1;Name=WP_201800448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454313.1;locus_tag=CYJ02_RS10425;product=phosphotransferase;protein_id=WP_201800448.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 23113 23982 . + . ID=gene-CYJ02_RS10430;Name=CYJ02_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10430;old_locus_tag=CYJ02_10430 NZ_PJUQ01000025.1 Protein Homology CDS 23113 23982 . + 0 ID=cds-WP_099986861.1;Parent=gene-CYJ02_RS10430;Dbxref=GenBank:WP_099986861.1;Name=WP_099986861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444963.1;locus_tag=CYJ02_RS10430;product=T3SS effector HopA1 family protein;protein_id=WP_099986861.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 24200 25084 . + . ID=gene-CYJ02_RS10440;Name=CYJ02_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10440;old_locus_tag=CYJ02_10440 NZ_PJUQ01000025.1 Protein Homology CDS 24200 25084 . + 0 ID=cds-WP_101431660.1;Parent=gene-CYJ02_RS10440;Dbxref=GenBank:WP_101431660.1;Name=WP_101431660.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ02_RS10440;product=ABC transporter ATP-binding protein;protein_id=WP_101431660.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 25103 25852 . + . ID=gene-CYJ02_RS10445;Name=CYJ02_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10445;old_locus_tag=CYJ02_10445 NZ_PJUQ01000025.1 GeneMarkS-2+ CDS 25103 25852 . + 0 ID=cds-WP_099986867.1;Parent=gene-CYJ02_RS10445;Dbxref=GenBank:WP_099986867.1;Name=WP_099986867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS10445;product=hypothetical protein;protein_id=WP_099986867.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 25864 26805 . + . ID=gene-CYJ02_RS10450;Name=CYJ02_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10450;old_locus_tag=CYJ02_10450 NZ_PJUQ01000025.1 Protein Homology CDS 25864 26805 . + 0 ID=cds-WP_099986871.1;Parent=gene-CYJ02_RS10450;Dbxref=GenBank:WP_099986871.1;Name=WP_099986871.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614924.1;locus_tag=CYJ02_RS10450;product=ABC transporter ATP-binding protein;protein_id=WP_099986871.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 26792 27604 . + . ID=gene-CYJ02_RS10455;Name=CYJ02_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10455;old_locus_tag=CYJ02_10455 NZ_PJUQ01000025.1 Protein Homology CDS 26792 27604 . + 0 ID=cds-WP_099986873.1;Parent=gene-CYJ02_RS10455;Dbxref=GenBank:WP_099986873.1;Name=WP_099986873.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014304636.1;locus_tag=CYJ02_RS10455;product=ABC transporter permease subunit;protein_id=WP_099986873.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 27619 28737 . + . ID=gene-CYJ02_RS10460;Name=CYJ02_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10460;old_locus_tag=CYJ02_10460 NZ_PJUQ01000025.1 Protein Homology CDS 27619 28737 . + 0 ID=cds-WP_099986875.1;Parent=gene-CYJ02_RS10460;Dbxref=GenBank:WP_099986875.1;Name=WP_099986875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898475.1;locus_tag=CYJ02_RS10460;product=quinone oxidoreductase family protein;protein_id=WP_099986875.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 29528 29758 . + . ID=gene-CYJ02_RS12915;Name=CYJ02_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12915 NZ_PJUQ01000025.1 Protein Homology CDS 29528 29758 . + 0 ID=cds-WP_233510329.1;Parent=gene-CYJ02_RS12915;Dbxref=GenBank:WP_233510329.1;Name=WP_233510329.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ02_RS12915;product=ATP-binding protein;protein_id=WP_233510329.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq pseudogene 29922 30163 . + . ID=gene-CYJ02_RS12920;Name=CYJ02_RS12920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12920;pseudo=true NZ_PJUQ01000025.1 Protein Homology CDS 29922 30163 . + 0 ID=cds-CYJ02_RS12920;Parent=gene-CYJ02_RS12920;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ02_RS12920;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 30279 30581 . + . ID=gene-CYJ02_RS10475;Name=CYJ02_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10475;old_locus_tag=CYJ02_10475 NZ_PJUQ01000025.1 Protein Homology CDS 30279 30581 . + 0 ID=cds-WP_015729671.1;Parent=gene-CYJ02_RS10475;Dbxref=GenBank:WP_015729671.1;Name=WP_015729671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729671.1;locus_tag=CYJ02_RS10475;product=hypothetical protein;protein_id=WP_015729671.1;transl_table=11 NZ_PJUQ01000025.1 RefSeq gene 30752 31081 . + . ID=gene-CYJ02_RS10480;Name=CYJ02_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10480;old_locus_tag=CYJ02_10480 NZ_PJUQ01000025.1 Protein Homology CDS 30752 31081 . + 0 ID=cds-WP_014612916.1;Parent=gene-CYJ02_RS10480;Dbxref=GenBank:WP_014612916.1;Name=WP_014612916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612916.1;locus_tag=CYJ02_RS10480;product=antibiotic biosynthesis monooxygenase;protein_id=WP_014612916.1;transl_table=11 ##sequence-region NZ_PJUQ01000026.1 1 28215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000026.1 RefSeq region 1 28215 . + . ID=NZ_PJUQ01000026.1:1..28215;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000026.1 RefSeq pseudogene 5 181 . - . ID=gene-CYJ02_RS13095;Name=CYJ02_RS13095;end_range=181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13095;partial=true;pseudo=true NZ_PJUQ01000026.1 Protein Homology CDS 5 181 . - 0 ID=cds-CYJ02_RS13095;Parent=gene-CYJ02_RS13095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=181,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012870.7;locus_tag=CYJ02_RS13095;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000026.1 RefSeq pseudogene 206 370 . - . ID=gene-CYJ02_RS13100;Name=CYJ02_RS13100;end_range=370,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13100;old_locus_tag=CYJ02_10485;partial=true;pseudo=true NZ_PJUQ01000026.1 Protein Homology CDS 206 370 . - 0 ID=cds-CYJ02_RS13100;Parent=gene-CYJ02_RS13100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=370,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.7;locus_tag=CYJ02_RS13100;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000026.1 RefSeq pseudogene 510 773 . - . ID=gene-CYJ02_RS13105;Name=CYJ02_RS13105;end_range=773,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13105;partial=true;pseudo=true NZ_PJUQ01000026.1 Protein Homology CDS 510 773 . - 0 ID=cds-CYJ02_RS13105;Parent=gene-CYJ02_RS13105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=773,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CYJ02_RS13105;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 1245 1868 . + . ID=gene-CYJ02_RS12825;Name=CYJ02_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12825 NZ_PJUQ01000026.1 GeneMarkS-2+ CDS 1245 1868 . + 0 ID=cds-WP_241901343.1;Parent=gene-CYJ02_RS12825;Dbxref=GenBank:WP_241901343.1;Name=WP_241901343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12825;product=hypothetical protein;protein_id=WP_241901343.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq pseudogene 1959 2366 . - . ID=gene-CYJ02_RS10495;Name=CYJ02_RS10495;end_range=2366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS10495;old_locus_tag=CYJ02_10495;partial=true;pseudo=true NZ_PJUQ01000026.1 Protein Homology CDS 1959 2366 . - 0 ID=cds-CYJ02_RS10495;Parent=gene-CYJ02_RS10495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS10495;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 2885 4579 . - . ID=gene-CYJ02_RS10500;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10500;old_locus_tag=CYJ02_10500 NZ_PJUQ01000026.1 Protein Homology CDS 2885 4579 . - 0 ID=cds-WP_014612892.1;Parent=gene-CYJ02_RS10500;Dbxref=GenBank:WP_014612892.1;Name=WP_014612892.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=CYJ02_RS10500;product=choline dehydrogenase;protein_id=WP_014612892.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 4707 6200 . - . ID=gene-CYJ02_RS10505;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10505;old_locus_tag=CYJ02_10505 NZ_PJUQ01000026.1 Protein Homology CDS 4707 6200 . - 0 ID=cds-WP_014612891.1;Parent=gene-CYJ02_RS10505;Dbxref=GenBank:WP_014612891.1;Name=WP_014612891.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167076.1;locus_tag=CYJ02_RS10505;product=betaine-aldehyde dehydrogenase;protein_id=WP_014612891.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 6422 6973 . + . ID=gene-CYJ02_RS10510;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=CYJ02_RS10510;old_locus_tag=CYJ02_10510 NZ_PJUQ01000026.1 Protein Homology CDS 6422 6973 . + 0 ID=cds-WP_014612890.1;Parent=gene-CYJ02_RS10510;Dbxref=GenBank:WP_014612890.1;Name=WP_014612890.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168438.1;locus_tag=CYJ02_RS10510;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_014612890.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 8009 9613 . - . ID=gene-CYJ02_RS10515;Name=CYJ02_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10515;old_locus_tag=CYJ02_10515 NZ_PJUQ01000026.1 Protein Homology CDS 8009 9613 . - 0 ID=cds-WP_037544109.1;Parent=gene-CYJ02_RS10515;Dbxref=GenBank:WP_037544109.1;Name=WP_037544109.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384111.1;locus_tag=CYJ02_RS10515;product=BCCT family transporter;protein_id=WP_037544109.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 10026 11348 . - . ID=gene-CYJ02_RS10520;Name=CYJ02_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10520;old_locus_tag=CYJ02_10520 NZ_PJUQ01000026.1 Protein Homology CDS 10026 11348 . - 0 ID=cds-WP_096533416.1;Parent=gene-CYJ02_RS10520;Dbxref=GenBank:WP_096533416.1;Name=WP_096533416.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167072.1;locus_tag=CYJ02_RS10520;product=Nramp family divalent metal transporter;protein_id=WP_096533416.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 11510 14374 . - . ID=gene-CYJ02_RS10525;Name=CYJ02_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10525;old_locus_tag=CYJ02_10525 NZ_PJUQ01000026.1 Protein Homology CDS 11510 14374 . - 0 ID=cds-WP_101431662.1;Parent=gene-CYJ02_RS10525;Dbxref=GenBank:WP_101431662.1;Name=WP_101431662.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=CYJ02_RS10525;product=DEAD/DEAH box helicase;protein_id=WP_101431662.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 14379 14771 . - . ID=gene-CYJ02_RS10530;Name=CYJ02_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10530;old_locus_tag=CYJ02_10530 NZ_PJUQ01000026.1 Protein Homology CDS 14379 14771 . - 0 ID=cds-WP_014612885.1;Parent=gene-CYJ02_RS10530;Dbxref=GenBank:WP_014612885.1;Name=WP_014612885.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612885.1;locus_tag=CYJ02_RS10530;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_014612885.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 14924 16345 . - . ID=gene-CYJ02_RS10535;Name=CYJ02_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10535;old_locus_tag=CYJ02_10535 NZ_PJUQ01000026.1 Protein Homology CDS 14924 16345 . - 0 ID=cds-WP_101431663.1;Parent=gene-CYJ02_RS10535;Dbxref=GenBank:WP_101431663.1;Name=WP_101431663.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612884.1;locus_tag=CYJ02_RS10535;product=alkaline phosphatase;protein_id=WP_101431663.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 16794 17429 . + . ID=gene-CYJ02_RS10540;Name=CYJ02_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10540;old_locus_tag=CYJ02_10540 NZ_PJUQ01000026.1 Protein Homology CDS 16794 17429 . + 0 ID=cds-WP_096533419.1;Parent=gene-CYJ02_RS10540;Dbxref=GenBank:WP_096533419.1;Name=WP_096533419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729699.1;locus_tag=CYJ02_RS10540;product=hypothetical protein;protein_id=WP_096533419.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 17583 18170 . - . ID=gene-CYJ02_RS10545;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10545;old_locus_tag=CYJ02_10545 NZ_PJUQ01000026.1 Protein Homology CDS 17583 18170 . - 0 ID=cds-WP_037542191.1;Parent=gene-CYJ02_RS10545;Dbxref=GenBank:WP_037542191.1;Name=WP_037542191.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612882.1;locus_tag=CYJ02_RS10545;product=signal peptidase I;protein_id=WP_037542191.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 18279 18827 . - . ID=gene-CYJ02_RS10550;Name=CYJ02_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10550;old_locus_tag=CYJ02_10550 NZ_PJUQ01000026.1 Protein Homology CDS 18279 18827 . - 0 ID=cds-WP_014612881.1;Parent=gene-CYJ02_RS10550;Dbxref=GenBank:WP_014612881.1;Name=WP_014612881.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168425.1;locus_tag=CYJ02_RS10550;product=helix-turn-helix domain-containing protein;protein_id=WP_014612881.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 18936 20114 . + . ID=gene-CYJ02_RS10555;Name=CYJ02_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10555;old_locus_tag=CYJ02_10555 NZ_PJUQ01000026.1 Protein Homology CDS 18936 20114 . + 0 ID=cds-WP_063278624.1;Parent=gene-CYJ02_RS10555;Dbxref=GenBank:WP_063278624.1;Name=WP_063278624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612880.1;locus_tag=CYJ02_RS10555;product=CynX/NimT family MFS transporter;protein_id=WP_063278624.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 20268 21278 . - . ID=gene-CYJ02_RS10560;Name=CYJ02_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10560;old_locus_tag=CYJ02_10560 NZ_PJUQ01000026.1 Protein Homology CDS 20268 21278 . - 0 ID=cds-WP_014612879.1;Parent=gene-CYJ02_RS10560;Dbxref=GenBank:WP_014612879.1;Name=WP_014612879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729703.1;locus_tag=CYJ02_RS10560;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_014612879.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 21492 23228 . - . ID=gene-CYJ02_RS10565;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10565;old_locus_tag=CYJ02_10565 NZ_PJUQ01000026.1 Protein Homology CDS 21492 23228 . - 0 ID=cds-WP_099986923.1;Parent=gene-CYJ02_RS10565;Dbxref=GenBank:WP_099986923.1;Name=WP_099986923.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=CYJ02_RS10565;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_099986923.1;transl_table=11 NZ_PJUQ01000026.1 cmsearch riboswitch 23425 23528 . - . ID=id-NZ_PJUQ01000026.1:23425..23528;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000026.1 RefSeq gene 23997 25487 . - . ID=gene-CYJ02_RS10570;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ02_RS10570;old_locus_tag=CYJ02_10570 NZ_PJUQ01000026.1 Protein Homology CDS 23997 25487 . - 0 ID=cds-WP_014612876.1;Parent=gene-CYJ02_RS10570;Dbxref=GenBank:WP_014612876.1;Name=WP_014612876.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=CYJ02_RS10570;product=cardiolipin synthase;protein_id=WP_014612876.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 25633 26481 . + . ID=gene-CYJ02_RS10575;Name=CYJ02_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10575;old_locus_tag=CYJ02_10575 NZ_PJUQ01000026.1 Protein Homology CDS 25633 26481 . + 0 ID=cds-WP_101431664.1;Parent=gene-CYJ02_RS10575;Dbxref=GenBank:WP_101431664.1;Name=WP_101431664.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167060.1;locus_tag=CYJ02_RS10575;product=alpha/beta hydrolase;protein_id=WP_101431664.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq pseudogene 26622 26833 . - . ID=gene-CYJ02_RS12830;Name=CYJ02_RS12830;end_range=26833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12830;partial=true;pseudo=true;start_range=.,26622 NZ_PJUQ01000026.1 Protein Homology CDS 26622 26833 . - 0 ID=cds-CYJ02_RS12830;Parent=gene-CYJ02_RS12830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=26833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612146.1;locus_tag=CYJ02_RS12830;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,26622;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 27076 27288 . + . ID=gene-CYJ02_RS10585;Name=CYJ02_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10585;old_locus_tag=CYJ02_10585 NZ_PJUQ01000026.1 GeneMarkS-2+ CDS 27076 27288 . + 0 ID=cds-WP_037542181.1;Parent=gene-CYJ02_RS10585;Dbxref=GenBank:WP_037542181.1;Name=WP_037542181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS10585;product=hypothetical protein;protein_id=WP_037542181.1;transl_table=11 NZ_PJUQ01000026.1 RefSeq pseudogene 27510 27695 . - . ID=gene-CYJ02_RS13110;Name=CYJ02_RS13110;end_range=27695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13110;old_locus_tag=CYJ02_10590;partial=true;pseudo=true NZ_PJUQ01000026.1 Protein Homology CDS 27510 27695 . - 0 ID=cds-CYJ02_RS13110;Parent=gene-CYJ02_RS13110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=27695,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ02_RS13110;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000026.1 RefSeq gene 27714 28215 . - . ID=gene-CYJ02_RS10595;Name=CYJ02_RS10595;end_range=28215,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10595;old_locus_tag=CYJ02_10595;partial=true NZ_PJUQ01000026.1 Protein Homology CDS 27714 28215 . - 1 ID=cds-WP_133121715.1;Parent=gene-CYJ02_RS10595;Dbxref=GenBank:WP_133121715.1;Name=WP_133121715.1;Ontology_term=GO:0055085,GO:0022857;end_range=28215,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729027.1;locus_tag=CYJ02_RS10595;partial=true;product=MFS transporter;protein_id=WP_133121715.1;transl_table=11 ##sequence-region NZ_PJUQ01000027.1 1 34160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000027.1 RefSeq region 1 34160 . + . ID=NZ_PJUQ01000027.1:1..34160;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000027.1 RefSeq gene 124 783 . - . ID=gene-CYJ02_RS10600;Name=CYJ02_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10600;old_locus_tag=CYJ02_10600 NZ_PJUQ01000027.1 Protein Homology CDS 124 783 . - 0 ID=cds-WP_014614257.1;Parent=gene-CYJ02_RS10600;Dbxref=GenBank:WP_014614257.1;Name=WP_014614257.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=CYJ02_RS10600;product=potassium channel family protein;protein_id=WP_014614257.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 932 1951 . - . ID=gene-CYJ02_RS10605;Name=CYJ02_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10605;old_locus_tag=CYJ02_10605 NZ_PJUQ01000027.1 Protein Homology CDS 932 1951 . - 0 ID=cds-WP_014614258.1;Parent=gene-CYJ02_RS10605;Dbxref=GenBank:WP_014614258.1;Name=WP_014614258.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=CYJ02_RS10605;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_014614258.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 1951 3294 . - . ID=gene-CYJ02_RS10610;Name=CYJ02_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10610;old_locus_tag=CYJ02_10610 NZ_PJUQ01000027.1 Protein Homology CDS 1951 3294 . - 0 ID=cds-WP_014614259.1;Parent=gene-CYJ02_RS10610;Dbxref=GenBank:WP_014614259.1;Name=WP_014614259.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614259.1;locus_tag=CYJ02_RS10610;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014614259.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 3497 3730 . + . ID=gene-CYJ02_RS10615;Name=CYJ02_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10615;old_locus_tag=CYJ02_10615 NZ_PJUQ01000027.1 Protein Homology CDS 3497 3730 . + 0 ID=cds-WP_014614260.1;Parent=gene-CYJ02_RS10615;Dbxref=GenBank:WP_014614260.1;Name=WP_014614260.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165586.1;locus_tag=CYJ02_RS10615;product=glutaredoxin family protein;protein_id=WP_014614260.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 3907 5628 . - . ID=gene-CYJ02_RS10620;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CYJ02_RS10620;old_locus_tag=CYJ02_10620 NZ_PJUQ01000027.1 Protein Homology CDS 3907 5628 . - 0 ID=cds-WP_015728953.1;Parent=gene-CYJ02_RS10620;Dbxref=GenBank:WP_015728953.1;Name=WP_015728953.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=CYJ02_RS10620;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_015728953.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 5628 5894 . - . ID=gene-CYJ02_RS10625;Name=CYJ02_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10625;old_locus_tag=CYJ02_10625 NZ_PJUQ01000027.1 Protein Homology CDS 5628 5894 . - 0 ID=cds-WP_014614262.1;Parent=gene-CYJ02_RS10625;Dbxref=GenBank:WP_014614262.1;Name=WP_014614262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=CYJ02_RS10625;product=phosphocarrier protein HPr;protein_id=WP_014614262.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 6058 6588 . - . ID=gene-CYJ02_RS10630;Name=CYJ02_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10630;old_locus_tag=CYJ02_10630 NZ_PJUQ01000027.1 Protein Homology CDS 6058 6588 . - 0 ID=cds-WP_014614263.1;Parent=gene-CYJ02_RS10630;Dbxref=GenBank:WP_014614263.1;Name=WP_014614263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=CYJ02_RS10630;product=hypothetical protein;protein_id=WP_014614263.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 6649 7818 . - . ID=gene-CYJ02_RS10635;Name=CYJ02_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10635;old_locus_tag=CYJ02_10635 NZ_PJUQ01000027.1 Protein Homology CDS 6649 7818 . - 0 ID=cds-WP_014614264.1;Parent=gene-CYJ02_RS10635;Dbxref=GenBank:WP_014614264.1;Name=WP_014614264.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165590.1;locus_tag=CYJ02_RS10635;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_014614264.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 7954 9285 . - . ID=gene-CYJ02_RS10640;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10640;old_locus_tag=CYJ02_10640 NZ_PJUQ01000027.1 Protein Homology CDS 7954 9285 . - 0 ID=cds-WP_101431665.1;Parent=gene-CYJ02_RS10640;Dbxref=GenBank:WP_101431665.1;Name=WP_101431665.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728950.1;locus_tag=CYJ02_RS10640;product=lipoteichoic acid stability factor AuxA;protein_id=WP_101431665.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 9651 9782 . + . ID=gene-CYJ02_RS12560;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=CYJ02_RS12560 NZ_PJUQ01000027.1 Protein Homology CDS 9651 9782 . + 0 ID=cds-WP_014614266.1;Parent=gene-CYJ02_RS12560;Dbxref=GenBank:WP_014614266.1;Name=WP_014614266.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=CYJ02_RS12560;product=glycopeptide resistance-associated protein GraF;protein_id=WP_014614266.1;transl_table=11 NZ_PJUQ01000027.1 cmsearch riboswitch 10626 10725 . + . ID=id-NZ_PJUQ01000027.1:10626..10725;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000027.1 RefSeq gene 10850 11425 . + . ID=gene-CYJ02_RS10645;Name=CYJ02_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10645;old_locus_tag=CYJ02_10645 NZ_PJUQ01000027.1 Protein Homology CDS 10850 11425 . + 0 ID=cds-WP_014614267.1;Parent=gene-CYJ02_RS10645;Dbxref=GenBank:WP_014614267.1;Name=WP_014614267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033477.1;locus_tag=CYJ02_RS10645;product=ECF transporter S component;protein_id=WP_014614267.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 11438 12841 . + . ID=gene-CYJ02_RS10650;Name=CYJ02_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10650;old_locus_tag=CYJ02_10650 NZ_PJUQ01000027.1 Protein Homology CDS 11438 12841 . + 0 ID=cds-WP_015728949.1;Parent=gene-CYJ02_RS10650;Dbxref=GenBank:WP_015728949.1;Name=WP_015728949.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=CYJ02_RS10650;product=ABC transporter ATP-binding protein;protein_id=WP_015728949.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 12838 13629 . + . ID=gene-CYJ02_RS10655;Name=CYJ02_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10655;old_locus_tag=CYJ02_10655 NZ_PJUQ01000027.1 Protein Homology CDS 12838 13629 . + 0 ID=cds-WP_063278785.1;Parent=gene-CYJ02_RS10655;Dbxref=GenBank:WP_063278785.1;Name=WP_063278785.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=CYJ02_RS10655;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_063278785.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 13848 15101 . - . ID=gene-CYJ02_RS10660;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CYJ02_RS10660;old_locus_tag=CYJ02_10660 NZ_PJUQ01000027.1 Protein Homology CDS 13848 15101 . - 0 ID=cds-WP_065520578.1;Parent=gene-CYJ02_RS10660;Dbxref=GenBank:WP_065520578.1;Name=WP_065520578.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614270.1;locus_tag=CYJ02_RS10660;product=phosphoribosylamine--glycine ligase;protein_id=WP_065520578.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 15119 16597 . - . ID=gene-CYJ02_RS10665;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CYJ02_RS10665;old_locus_tag=CYJ02_10665 NZ_PJUQ01000027.1 Protein Homology CDS 15119 16597 . - 0 ID=cds-WP_063284641.1;Parent=gene-CYJ02_RS10665;Dbxref=GenBank:WP_063284641.1;Name=WP_063284641.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=CYJ02_RS10665;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_063284641.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 16614 17180 . - . ID=gene-CYJ02_RS10670;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CYJ02_RS10670;old_locus_tag=CYJ02_10670 NZ_PJUQ01000027.1 Protein Homology CDS 16614 17180 . - 0 ID=cds-WP_037543346.1;Parent=gene-CYJ02_RS10670;Dbxref=GenBank:WP_037543346.1;Name=WP_037543346.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=CYJ02_RS10670;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037543346.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 17180 18211 . - . ID=gene-CYJ02_RS10675;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CYJ02_RS10675;old_locus_tag=CYJ02_10675 NZ_PJUQ01000027.1 Protein Homology CDS 17180 18211 . - 0 ID=cds-WP_065354425.1;Parent=gene-CYJ02_RS10675;Dbxref=GenBank:WP_065354425.1;Name=WP_065354425.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276159.1;locus_tag=CYJ02_RS10675;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_065354425.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 18215 19636 . - . ID=gene-CYJ02_RS10680;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CYJ02_RS10680;old_locus_tag=CYJ02_10680 NZ_PJUQ01000027.1 Protein Homology CDS 18215 19636 . - 0 ID=cds-WP_014614274.1;Parent=gene-CYJ02_RS10680;Dbxref=GenBank:WP_014614274.1;Name=WP_014614274.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=CYJ02_RS10680;product=amidophosphoribosyltransferase;protein_id=WP_014614274.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 19615 21804 . - . ID=gene-CYJ02_RS10685;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CYJ02_RS10685;old_locus_tag=CYJ02_10685 NZ_PJUQ01000027.1 Protein Homology CDS 19615 21804 . - 0 ID=cds-WP_101431666.1;Parent=gene-CYJ02_RS10685;Dbxref=GenBank:WP_101431666.1;Name=WP_101431666.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=CYJ02_RS10685;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_101431666.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 21797 22468 . - . ID=gene-CYJ02_RS10690;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=CYJ02_RS10690;old_locus_tag=CYJ02_10690 NZ_PJUQ01000027.1 Protein Homology CDS 21797 22468 . - 0 ID=cds-WP_014614276.1;Parent=gene-CYJ02_RS10690;Dbxref=GenBank:WP_014614276.1;Name=WP_014614276.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167837.1;locus_tag=CYJ02_RS10690;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_014614276.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 22470 22730 . - . ID=gene-CYJ02_RS10695;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=CYJ02_RS10695;old_locus_tag=CYJ02_10695 NZ_PJUQ01000027.1 Protein Homology CDS 22470 22730 . - 0 ID=cds-WP_014614277.1;Parent=gene-CYJ02_RS10695;Dbxref=GenBank:WP_014614277.1;Name=WP_014614277.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=CYJ02_RS10695;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_014614277.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 22733 23434 . - . ID=gene-CYJ02_RS10700;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10700;old_locus_tag=CYJ02_10700 NZ_PJUQ01000027.1 Protein Homology CDS 22733 23434 . - 0 ID=cds-WP_014614278.1;Parent=gene-CYJ02_RS10700;Dbxref=GenBank:WP_014614278.1;Name=WP_014614278.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303439.1;locus_tag=CYJ02_RS10700;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014614278.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 23431 24564 . - . ID=gene-CYJ02_RS10705;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CYJ02_RS10705;old_locus_tag=CYJ02_10705 NZ_PJUQ01000027.1 Protein Homology CDS 23431 24564 . - 0 ID=cds-WP_070407582.1;Parent=gene-CYJ02_RS10705;Dbxref=GenBank:WP_070407582.1;Name=WP_070407582.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728942.1;locus_tag=CYJ02_RS10705;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_070407582.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 24551 25033 . - . ID=gene-CYJ02_RS10710;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CYJ02_RS10710;old_locus_tag=CYJ02_10710 NZ_PJUQ01000027.1 Protein Homology CDS 24551 25033 . - 0 ID=cds-WP_014614280.1;Parent=gene-CYJ02_RS10710;Dbxref=GenBank:WP_014614280.1;Name=WP_014614280.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=CYJ02_RS10710;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_014614280.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 25243 26100 . + . ID=gene-CYJ02_RS10715;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CYJ02_RS10715;old_locus_tag=CYJ02_10715 NZ_PJUQ01000027.1 Protein Homology CDS 25243 26100 . + 0 ID=cds-WP_014614281.1;Parent=gene-CYJ02_RS10715;Dbxref=GenBank:WP_014614281.1;Name=WP_014614281.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=CYJ02_RS10715;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_014614281.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 26410 27555 . - . ID=gene-CYJ02_RS10720;Name=CYJ02_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10720;old_locus_tag=CYJ02_10720 NZ_PJUQ01000027.1 Protein Homology CDS 26410 27555 . - 0 ID=cds-WP_014614282.1;Parent=gene-CYJ02_RS10720;Dbxref=GenBank:WP_014614282.1;Name=WP_014614282.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=CYJ02_RS10720;product=globin domain-containing protein;protein_id=WP_014614282.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 27783 28118 . + . ID=gene-CYJ02_RS10725;Name=CYJ02_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10725;old_locus_tag=CYJ02_10725 NZ_PJUQ01000027.1 Protein Homology CDS 27783 28118 . + 0 ID=cds-WP_014614283.1;Parent=gene-CYJ02_RS10725;Dbxref=GenBank:WP_014614283.1;Name=WP_014614283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=CYJ02_RS10725;product=DUF5011 domain-containing protein;protein_id=WP_014614283.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 28619 29719 . + . ID=gene-CYJ02_RS10730;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CYJ02_RS10730;old_locus_tag=CYJ02_10730 NZ_PJUQ01000027.1 Protein Homology CDS 28619 29719 . + 0 ID=cds-WP_014614285.1;Parent=gene-CYJ02_RS10730;Dbxref=GenBank:WP_014614285.1;Name=WP_014614285.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614285.1;locus_tag=CYJ02_RS10730;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_014614285.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 29722 31710 . + . ID=gene-CYJ02_RS10735;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10735;old_locus_tag=CYJ02_10735 NZ_PJUQ01000027.1 Protein Homology CDS 29722 31710 . + 0 ID=cds-WP_031253657.1;Parent=gene-CYJ02_RS10735;Dbxref=GenBank:WP_031253657.1;Name=WP_031253657.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CYJ02_RS10735;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_031253657.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 31700 32308 . + . ID=gene-CYJ02_RS10740;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10740;old_locus_tag=CYJ02_10740 NZ_PJUQ01000027.1 Protein Homology CDS 31700 32308 . + 0 ID=cds-WP_014614287.1;Parent=gene-CYJ02_RS10740;Dbxref=GenBank:WP_014614287.1;Name=WP_014614287.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CYJ02_RS10740;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_014614287.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 32305 32595 . + . ID=gene-CYJ02_RS10745;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CYJ02_RS10745;old_locus_tag=CYJ02_10745 NZ_PJUQ01000027.1 Protein Homology CDS 32305 32595 . + 0 ID=cds-WP_014614288.1;Parent=gene-CYJ02_RS10745;Dbxref=GenBank:WP_014614288.1;Name=WP_014614288.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=CYJ02_RS10745;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_014614288.1;transl_table=11 NZ_PJUQ01000027.1 RefSeq gene 32776 33681 . + . ID=gene-CYJ02_RS10750;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CYJ02_RS10750;old_locus_tag=CYJ02_10750 NZ_PJUQ01000027.1 Protein Homology CDS 32776 33681 . + 0 ID=cds-WP_101431667.1;Parent=gene-CYJ02_RS10750;Dbxref=GenBank:WP_101431667.1;Name=WP_101431667.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728941.1;locus_tag=CYJ02_RS10750;product=ribonucleoside hydrolase RihC;protein_id=WP_101431667.1;transl_table=11 ##sequence-region NZ_PJUQ01000028.1 1 13444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000028.1 RefSeq region 1 13444 . + . ID=NZ_PJUQ01000028.1:1..13444;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000028.1 RefSeq gene 1 570 . + . ID=gene-CYJ02_RS10755;Name=CYJ02_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10755;old_locus_tag=CYJ02_10755;partial=true;start_range=.,1 NZ_PJUQ01000028.1 Protein Homology CDS 1 570 . + 0 ID=cds-WP_198586554.1;Parent=gene-CYJ02_RS10755;Dbxref=GenBank:WP_198586554.1;Name=WP_198586554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691999.1;locus_tag=CYJ02_RS10755;partial=true;product=conjugal transfer protein;protein_id=WP_198586554.1;start_range=.,1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 574 837 . + . ID=gene-CYJ02_RS10760;Name=CYJ02_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10760;old_locus_tag=CYJ02_10760 NZ_PJUQ01000028.1 Protein Homology CDS 574 837 . + 0 ID=cds-WP_101431668.1;Parent=gene-CYJ02_RS10760;Dbxref=GenBank:WP_101431668.1;Name=WP_101431668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219837.1;locus_tag=CYJ02_RS10760;product=TcpD family membrane protein;protein_id=WP_101431668.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 844 1227 . + . ID=gene-CYJ02_RS10765;Name=CYJ02_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10765;old_locus_tag=CYJ02_10765 NZ_PJUQ01000028.1 Protein Homology CDS 844 1227 . + 0 ID=cds-WP_019168874.1;Parent=gene-CYJ02_RS10765;Dbxref=GenBank:WP_019168874.1;Name=WP_019168874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015581841.1;locus_tag=CYJ02_RS10765;product=TcpE family conjugal transfer membrane protein;protein_id=WP_019168874.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 1262 3757 . + . ID=gene-CYJ02_RS10770;Name=CYJ02_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10770;old_locus_tag=CYJ02_10770 NZ_PJUQ01000028.1 Protein Homology CDS 1262 3757 . + 0 ID=cds-WP_101431669.1;Parent=gene-CYJ02_RS10770;Dbxref=GenBank:WP_101431669.1;Name=WP_101431669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049261.1;locus_tag=CYJ02_RS10770;product=ATP-binding protein;protein_id=WP_101431669.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 3772 5166 . + . ID=gene-CYJ02_RS10775;Name=CYJ02_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10775;old_locus_tag=CYJ02_10775 NZ_PJUQ01000028.1 Protein Homology CDS 3772 5166 . + 0 ID=cds-WP_101431670.1;Parent=gene-CYJ02_RS10775;Dbxref=GenBank:WP_101431670.1;Name=WP_101431670.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168876.1;locus_tag=CYJ02_RS10775;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_101431670.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 5188 7065 . + . ID=gene-CYJ02_RS10780;Name=CYJ02_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10780;old_locus_tag=CYJ02_10780 NZ_PJUQ01000028.1 Protein Homology CDS 5188 7065 . + 0 ID=cds-WP_101431671.1;Parent=gene-CYJ02_RS10780;Dbxref=GenBank:WP_101431671.1;Name=WP_101431671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681156.1;locus_tag=CYJ02_RS10780;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_101431671.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 7055 8098 . + . ID=gene-CYJ02_RS10785;Name=CYJ02_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10785;old_locus_tag=CYJ02_10785 NZ_PJUQ01000028.1 Protein Homology CDS 7055 8098 . + 0 ID=cds-WP_101431672.1;Parent=gene-CYJ02_RS10785;Dbxref=GenBank:WP_101431672.1;Name=WP_101431672.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247473.1;locus_tag=CYJ02_RS10785;product=CHAP domain-containing protein;protein_id=WP_101431672.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 8103 8693 . + . ID=gene-CYJ02_RS10790;Name=CYJ02_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10790;old_locus_tag=CYJ02_10790 NZ_PJUQ01000028.1 Protein Homology CDS 8103 8693 . + 0 ID=cds-WP_019168879.1;Parent=gene-CYJ02_RS10790;Dbxref=GenBank:WP_019168879.1;Name=WP_019168879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810447.1;locus_tag=CYJ02_RS10790;product=hypothetical protein;protein_id=WP_019168879.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 8743 9096 . + . ID=gene-CYJ02_RS10795;Name=CYJ02_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10795;old_locus_tag=CYJ02_10795 NZ_PJUQ01000028.1 Protein Homology CDS 8743 9096 . + 0 ID=cds-WP_101431673.1;Parent=gene-CYJ02_RS10795;Dbxref=GenBank:WP_101431673.1;Name=WP_101431673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168880.1;locus_tag=CYJ02_RS10795;product=cystatin-like fold lipoprotein;protein_id=WP_101431673.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 9201 9704 . + . ID=gene-CYJ02_RS10800;Name=CYJ02_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10800;old_locus_tag=CYJ02_10800 NZ_PJUQ01000028.1 Protein Homology CDS 9201 9704 . + 0 ID=cds-WP_050331091.1;Parent=gene-CYJ02_RS10800;Dbxref=GenBank:WP_050331091.1;Name=WP_050331091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168881.1;locus_tag=CYJ02_RS10800;product=helix-turn-helix domain-containing protein;protein_id=WP_050331091.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 9742 10212 . + . ID=gene-CYJ02_RS10805;Name=CYJ02_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10805;old_locus_tag=CYJ02_10805 NZ_PJUQ01000028.1 Protein Homology CDS 9742 10212 . + 0 ID=cds-WP_241648193.1;Parent=gene-CYJ02_RS10805;Dbxref=GenBank:WP_241648193.1;Name=WP_241648193.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=CYJ02_RS10805;product=IS30 family transposase;protein_id=WP_241648193.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 10531 10815 . + . ID=gene-CYJ02_RS10810;Name=CYJ02_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10810;old_locus_tag=CYJ02_10810 NZ_PJUQ01000028.1 Protein Homology CDS 10531 10815 . + 0 ID=cds-WP_019168868.1;Parent=gene-CYJ02_RS10810;Dbxref=GenBank:WP_019168868.1;Name=WP_019168868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581821.1;locus_tag=CYJ02_RS10810;product=hypothetical protein;protein_id=WP_019168868.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 10980 11300 . + . ID=gene-CYJ02_RS10815;Name=CYJ02_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10815;old_locus_tag=CYJ02_10815 NZ_PJUQ01000028.1 Protein Homology CDS 10980 11300 . + 0 ID=cds-WP_019168869.1;Parent=gene-CYJ02_RS10815;Dbxref=GenBank:WP_019168869.1;Name=WP_019168869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805733.1;locus_tag=CYJ02_RS10815;product=DUF961 family protein;protein_id=WP_019168869.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 11315 11623 . + . ID=gene-CYJ02_RS10820;Name=CYJ02_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10820;old_locus_tag=CYJ02_10820 NZ_PJUQ01000028.1 Protein Homology CDS 11315 11623 . + 0 ID=cds-WP_019168870.1;Parent=gene-CYJ02_RS10820;Dbxref=GenBank:WP_019168870.1;Name=WP_019168870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168870.1;locus_tag=CYJ02_RS10820;product=hypothetical protein;protein_id=WP_019168870.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq gene 11786 12886 . + . ID=gene-CYJ02_RS10825;Name=CYJ02_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10825;old_locus_tag=CYJ02_10825 NZ_PJUQ01000028.1 Protein Homology CDS 11786 12886 . + 0 ID=cds-WP_050331077.1;Parent=gene-CYJ02_RS10825;Dbxref=GenBank:WP_050331077.1;Name=WP_050331077.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431198.1;locus_tag=CYJ02_RS10825;product=replication initiation factor domain-containing protein;protein_id=WP_050331077.1;transl_table=11 NZ_PJUQ01000028.1 RefSeq pseudogene 12962 13444 . + . ID=gene-CYJ02_RS10830;Name=CYJ02_RS10830;end_range=13444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS10830;old_locus_tag=CYJ02_10830;partial=true;pseudo=true NZ_PJUQ01000028.1 Protein Homology CDS 12962 13444 . + 0 ID=cds-CYJ02_RS10830;Parent=gene-CYJ02_RS10830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691999.1;locus_tag=CYJ02_RS10830;partial=true;product=conjugal transfer protein;pseudo=true;transl_table=11 ##sequence-region NZ_PJUQ01000029.1 1 33714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000029.1 RefSeq region 1 33714 . + . ID=NZ_PJUQ01000029.1:1..33714;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000029.1 RefSeq gene 540 1424 . + . ID=gene-CYJ02_RS10835;Name=CYJ02_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10835;old_locus_tag=CYJ02_10835 NZ_PJUQ01000029.1 Protein Homology CDS 540 1424 . + 0 ID=cds-WP_101431675.1;Parent=gene-CYJ02_RS10835;Dbxref=GenBank:WP_101431675.1;Name=WP_101431675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01716.1;locus_tag=CYJ02_RS10835;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=WP_101431675.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 1497 1622 . + . ID=gene-CYJ02_RS13115;Name=CYJ02_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13115 NZ_PJUQ01000029.1 Protein Homology CDS 1497 1622 . + 0 ID=cds-WP_014613468.1;Parent=gene-CYJ02_RS13115;Dbxref=GenBank:WP_014613468.1;Name=WP_014613468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041055.1;locus_tag=CYJ02_RS13115;product=ryptide family R-Y-crosslinked RiPP peptide;protein_id=WP_014613468.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 1640 3031 . + . ID=gene-CYJ02_RS10840;Name=CYJ02_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10840;old_locus_tag=CYJ02_10840 NZ_PJUQ01000029.1 Protein Homology CDS 1640 3031 . + 0 ID=cds-WP_101431676.1;Parent=gene-CYJ02_RS10840;Dbxref=GenBank:WP_101431676.1;Name=WP_101431676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613469.1;locus_tag=CYJ02_RS10840;product=radical SAM/SPASM ryptide class RiPP maturase;protein_id=WP_101431676.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 3024 4202 . + . ID=gene-CYJ02_RS10845;Name=CYJ02_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10845;old_locus_tag=CYJ02_10845 NZ_PJUQ01000029.1 Protein Homology CDS 3024 4202 . + 0 ID=cds-WP_101431677.1;Parent=gene-CYJ02_RS10845;Dbxref=GenBank:WP_101431677.1;Name=WP_101431677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613470.1;locus_tag=CYJ02_RS10845;product=ryptide export MFS transporter;protein_id=WP_101431677.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 4592 5134 . + . ID=gene-CYJ02_RS10850;Name=CYJ02_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10850;old_locus_tag=CYJ02_10850 NZ_PJUQ01000029.1 Protein Homology CDS 4592 5134 . + 0 ID=cds-WP_014613471.1;Parent=gene-CYJ02_RS10850;Dbxref=GenBank:WP_014613471.1;Name=WP_014613471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613471.1;locus_tag=CYJ02_RS10850;product=metalloprotease family protein;protein_id=WP_014613471.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 5239 6309 . + . ID=gene-CYJ02_RS10855;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10855;old_locus_tag=CYJ02_10855 NZ_PJUQ01000029.1 Protein Homology CDS 5239 6309 . + 0 ID=cds-WP_101431678.1;Parent=gene-CYJ02_RS10855;Dbxref=GenBank:WP_101431678.1;Name=WP_101431678.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=CYJ02_RS10855;product=DNA polymerase IV;protein_id=WP_101431678.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 6304 6864 . - . ID=gene-CYJ02_RS10860;Name=CYJ02_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10860;old_locus_tag=CYJ02_10860 NZ_PJUQ01000029.1 Protein Homology CDS 6304 6864 . - 0 ID=cds-WP_014613473.1;Parent=gene-CYJ02_RS10860;Dbxref=GenBank:WP_014613473.1;Name=WP_014613473.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=CYJ02_RS10860;product=3'-5' exonuclease;protein_id=WP_014613473.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 7153 7656 . - . ID=gene-CYJ02_RS10865;Name=CYJ02_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10865;old_locus_tag=CYJ02_10865 NZ_PJUQ01000029.1 Protein Homology CDS 7153 7656 . - 0 ID=cds-WP_014613474.1;Parent=gene-CYJ02_RS10865;Dbxref=GenBank:WP_014613474.1;Name=WP_014613474.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613474.1;locus_tag=CYJ02_RS10865;product=ferritin;protein_id=WP_014613474.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 7853 9163 . + . ID=gene-CYJ02_RS10870;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=CYJ02_RS10870;old_locus_tag=CYJ02_10870 NZ_PJUQ01000029.1 Protein Homology CDS 7853 9163 . + 0 ID=cds-WP_014613475.1;Parent=gene-CYJ02_RS10870;Dbxref=GenBank:WP_014613475.1;Name=WP_014613475.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166457.1;locus_tag=CYJ02_RS10870;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_014613475.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 9165 9887 . + . ID=gene-CYJ02_RS10875;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CYJ02_RS10875;old_locus_tag=CYJ02_10875 NZ_PJUQ01000029.1 Protein Homology CDS 9165 9887 . + 0 ID=cds-WP_014613476.1;Parent=gene-CYJ02_RS10875;Dbxref=GenBank:WP_014613476.1;Name=WP_014613476.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613476.1;locus_tag=CYJ02_RS10875;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_014613476.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 10856 11854 . - . ID=gene-CYJ02_RS10880;Name=CYJ02_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10880;old_locus_tag=CYJ02_10880 NZ_PJUQ01000029.1 Protein Homology CDS 10856 11854 . - 0 ID=cds-WP_014613477.1;Parent=gene-CYJ02_RS10880;Dbxref=GenBank:WP_014613477.1;Name=WP_014613477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169359.1;locus_tag=CYJ02_RS10880;product=FUSC family protein;protein_id=WP_014613477.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 11951 12712 . + . ID=gene-CYJ02_RS10885;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CYJ02_RS10885;old_locus_tag=CYJ02_10885 NZ_PJUQ01000029.1 Protein Homology CDS 11951 12712 . + 0 ID=cds-WP_014613478.1;Parent=gene-CYJ02_RS10885;Dbxref=GenBank:WP_014613478.1;Name=WP_014613478.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169360.1;locus_tag=CYJ02_RS10885;product=type I methionyl aminopeptidase;protein_id=WP_014613478.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 12810 13199 . + . ID=gene-CYJ02_RS10890;Name=CYJ02_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10890;old_locus_tag=CYJ02_10890 NZ_PJUQ01000029.1 Protein Homology CDS 12810 13199 . + 0 ID=cds-WP_014613479.1;Parent=gene-CYJ02_RS10890;Dbxref=GenBank:WP_014613479.1;Name=WP_014613479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613479.1;locus_tag=CYJ02_RS10890;product=hypothetical protein;protein_id=WP_014613479.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 13212 13913 . + . ID=gene-CYJ02_RS10895;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=CYJ02_RS10895;old_locus_tag=CYJ02_10895 NZ_PJUQ01000029.1 Protein Homology CDS 13212 13913 . + 0 ID=cds-WP_014613480.1;Parent=gene-CYJ02_RS10895;Dbxref=GenBank:WP_014613480.1;Name=WP_014613480.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=CYJ02_RS10895;product=cell wall-active antibiotics response protein VraT;protein_id=WP_014613480.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 13910 14953 . + . ID=gene-CYJ02_RS10900;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=CYJ02_RS10900;old_locus_tag=CYJ02_10900 NZ_PJUQ01000029.1 Protein Homology CDS 13910 14953 . + 0 ID=cds-WP_014613481.1;Parent=gene-CYJ02_RS10900;Dbxref=GenBank:WP_014613481.1;Name=WP_014613481.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=CYJ02_RS10900;product=sensor histidine kinase VraS;protein_id=WP_014613481.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 14943 15572 . + . ID=gene-CYJ02_RS10905;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=CYJ02_RS10905;old_locus_tag=CYJ02_10905 NZ_PJUQ01000029.1 Protein Homology CDS 14943 15572 . + 0 ID=cds-WP_014613482.1;Parent=gene-CYJ02_RS10905;Dbxref=GenBank:WP_014613482.1;Name=WP_014613482.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=CYJ02_RS10905;product=response regulator transcription factor VraR;protein_id=WP_014613482.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 16147 16728 . - . ID=gene-CYJ02_RS10910;Name=CYJ02_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10910;old_locus_tag=CYJ02_10910 NZ_PJUQ01000029.1 Protein Homology CDS 16147 16728 . - 0 ID=cds-WP_070407816.1;Parent=gene-CYJ02_RS10910;Dbxref=GenBank:WP_070407816.1;Name=WP_070407816.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729388.1;locus_tag=CYJ02_RS10910;product=beta-class carbonic anhydrase;protein_id=WP_070407816.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 16761 18098 . - . ID=gene-CYJ02_RS10915;Name=CYJ02_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10915;old_locus_tag=CYJ02_10915 NZ_PJUQ01000029.1 Protein Homology CDS 16761 18098 . - 0 ID=cds-WP_015729387.1;Parent=gene-CYJ02_RS10915;Dbxref=GenBank:WP_015729387.1;Name=WP_015729387.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729387.1;locus_tag=CYJ02_RS10915;product=YihY/virulence factor BrkB family protein;protein_id=WP_015729387.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 18314 18601 . - . ID=gene-CYJ02_RS10920;Name=CYJ02_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10920;old_locus_tag=CYJ02_10920 NZ_PJUQ01000029.1 Protein Homology CDS 18314 18601 . - 0 ID=cds-WP_101431679.1;Parent=gene-CYJ02_RS10920;Dbxref=GenBank:WP_101431679.1;Name=WP_101431679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169367.1;locus_tag=CYJ02_RS10920;product=YtxH domain-containing protein;protein_id=WP_101431679.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 18609 19067 . - . ID=gene-CYJ02_RS10925;Name=CYJ02_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10925;old_locus_tag=CYJ02_10925 NZ_PJUQ01000029.1 Protein Homology CDS 18609 19067 . - 0 ID=cds-WP_014613486.1;Parent=gene-CYJ02_RS10925;Dbxref=GenBank:WP_014613486.1;Name=WP_014613486.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=CYJ02_RS10925;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_014613486.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 19201 19404 . + . ID=gene-CYJ02_RS10930;Name=CYJ02_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10930;old_locus_tag=CYJ02_10930 NZ_PJUQ01000029.1 Protein Homology CDS 19201 19404 . + 0 ID=cds-WP_014613487.1;Parent=gene-CYJ02_RS10930;Dbxref=GenBank:WP_014613487.1;Name=WP_014613487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482850.1;locus_tag=CYJ02_RS10930;product=DUF1128 family protein;protein_id=WP_014613487.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 19426 20658 . + . ID=gene-CYJ02_RS10935;Name=CYJ02_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10935;old_locus_tag=CYJ02_10935 NZ_PJUQ01000029.1 Protein Homology CDS 19426 20658 . + 0 ID=cds-WP_037542648.1;Parent=gene-CYJ02_RS10935;Dbxref=GenBank:WP_037542648.1;Name=WP_037542648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729386.1;locus_tag=CYJ02_RS10935;product=aminopeptidase;protein_id=WP_037542648.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 20677 21198 . + . ID=gene-CYJ02_RS10940;Name=CYJ02_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10940;old_locus_tag=CYJ02_10940 NZ_PJUQ01000029.1 Protein Homology CDS 20677 21198 . + 0 ID=cds-WP_014613489.1;Parent=gene-CYJ02_RS10940;Dbxref=GenBank:WP_014613489.1;Name=WP_014613489.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166469.1;locus_tag=CYJ02_RS10940;product=acyl-CoA thioesterase;protein_id=WP_014613489.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 21263 22402 . - . ID=gene-CYJ02_RS10945;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10945;old_locus_tag=CYJ02_10945 NZ_PJUQ01000029.1 Protein Homology CDS 21263 22402 . - 0 ID=cds-WP_101431680.1;Parent=gene-CYJ02_RS10945;Dbxref=GenBank:WP_101431680.1;Name=WP_101431680.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219887.1;locus_tag=CYJ02_RS10945;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_101431680.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 22518 22679 . + . ID=gene-CYJ02_RS12565;Name=CYJ02_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12565 NZ_PJUQ01000029.1 Protein Homology CDS 22518 22679 . + 0 ID=cds-WP_015729384.1;Parent=gene-CYJ02_RS12565;Dbxref=GenBank:WP_015729384.1;Name=WP_015729384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=CYJ02_RS12565;product=SE1561 family protein;protein_id=WP_015729384.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 22755 23270 . + . ID=gene-CYJ02_RS10950;Name=CYJ02_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10950;old_locus_tag=CYJ02_10950 NZ_PJUQ01000029.1 Protein Homology CDS 22755 23270 . + 0 ID=cds-WP_096533566.1;Parent=gene-CYJ02_RS10950;Dbxref=GenBank:WP_096533566.1;Name=WP_096533566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500510.1;locus_tag=CYJ02_RS10950;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_096533566.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 23845 25590 . - . ID=gene-CYJ02_RS10955;Name=CYJ02_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10955;old_locus_tag=CYJ02_10955 NZ_PJUQ01000029.1 Protein Homology CDS 23845 25590 . - 0 ID=cds-WP_015729383.1;Parent=gene-CYJ02_RS10955;Dbxref=GenBank:WP_015729383.1;Name=WP_015729383.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=CYJ02_RS10955;product=pyruvate oxidase;protein_id=WP_015729383.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 25791 26588 . + . ID=gene-CYJ02_RS10960;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=CYJ02_RS10960;old_locus_tag=CYJ02_10960 NZ_PJUQ01000029.1 Protein Homology CDS 25791 26588 . + 0 ID=cds-WP_014613494.1;Parent=gene-CYJ02_RS10960;Dbxref=GenBank:WP_014613494.1;Name=WP_014613494.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166474.1;locus_tag=CYJ02_RS10960;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_014613494.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 26773 27576 . + . ID=gene-CYJ02_RS10965;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CYJ02_RS10965;old_locus_tag=CYJ02_10965 NZ_PJUQ01000029.1 Protein Homology CDS 26773 27576 . + 0 ID=cds-WP_015729382.1;Parent=gene-CYJ02_RS10965;Dbxref=GenBank:WP_015729382.1;Name=WP_015729382.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=CYJ02_RS10965;product=recombination regulator RecX;protein_id=WP_015729382.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 27569 27883 . + . ID=gene-CYJ02_RS10970;Name=CYJ02_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10970;old_locus_tag=CYJ02_10970 NZ_PJUQ01000029.1 Protein Homology CDS 27569 27883 . + 0 ID=cds-WP_014613497.1;Parent=gene-CYJ02_RS10970;Dbxref=GenBank:WP_014613497.1;Name=WP_014613497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509976.1;locus_tag=CYJ02_RS10970;product=YfhH family protein;protein_id=WP_014613497.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 27899 29428 . + . ID=gene-CYJ02_RS10975;Name=CYJ02_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10975;old_locus_tag=CYJ02_10975 NZ_PJUQ01000029.1 Protein Homology CDS 27899 29428 . + 0 ID=cds-WP_101431681.1;Parent=gene-CYJ02_RS10975;Dbxref=GenBank:WP_101431681.1;Name=WP_101431681.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501580.1;locus_tag=CYJ02_RS10975;product=ATP-binding cassette domain-containing protein;protein_id=WP_101431681.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 29432 30235 . + . ID=gene-CYJ02_RS10980;Name=CYJ02_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10980;old_locus_tag=CYJ02_10980 NZ_PJUQ01000029.1 Protein Homology CDS 29432 30235 . + 0 ID=cds-WP_201800441.1;Parent=gene-CYJ02_RS10980;Dbxref=GenBank:WP_201800441.1;Name=WP_201800441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=CYJ02_RS10980;product=teichoic acid translocation permease;protein_id=WP_201800441.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 30706 31683 . - . ID=gene-CYJ02_RS10985;Name=CYJ02_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS10985;old_locus_tag=CYJ02_10985 NZ_PJUQ01000029.1 Protein Homology CDS 30706 31683 . - 0 ID=cds-WP_014613500.1;Parent=gene-CYJ02_RS10985;Dbxref=GenBank:WP_014613500.1;Name=WP_014613500.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=CYJ02_RS10985;product=metal-dependent hydrolase;protein_id=WP_014613500.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 31774 32820 . + . ID=gene-CYJ02_RS10990;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CYJ02_RS10990;old_locus_tag=CYJ02_10990 NZ_PJUQ01000029.1 Protein Homology CDS 31774 32820 . + 0 ID=cds-WP_101431682.1;Parent=gene-CYJ02_RS10990;Dbxref=GenBank:WP_101431682.1;Name=WP_101431682.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166479.1;locus_tag=CYJ02_RS10990;product=A/G-specific adenine glycosylase;protein_id=WP_101431682.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 32886 33428 . + . ID=gene-CYJ02_RS10995;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=CYJ02_RS10995;old_locus_tag=CYJ02_10995 NZ_PJUQ01000029.1 Protein Homology CDS 32886 33428 . + 0 ID=cds-WP_014613502.1;Parent=gene-CYJ02_RS10995;Dbxref=GenBank:WP_014613502.1;Name=WP_014613502.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CYJ02_RS10995;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_014613502.1;transl_table=11 NZ_PJUQ01000029.1 RefSeq gene 33425 33714 . - . ID=gene-CYJ02_RS12620;Name=CYJ02_RS12620;end_range=33714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12620;partial=true NZ_PJUQ01000029.1 GeneMarkS-2+ CDS 33425 33714 . - 2 ID=cds-WP_206747225.1;Parent=gene-CYJ02_RS12620;Dbxref=GenBank:WP_206747225.1;Name=WP_206747225.1;end_range=33714,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12620;partial=true;product=hypothetical protein;protein_id=WP_206747225.1;transl_table=11 ##sequence-region NZ_PJUQ01000003.1 1 210928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000003.1 RefSeq region 1 210928 . + . ID=NZ_PJUQ01000003.1:1..210928;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000003.1 RefSeq gene 139 2178 . - . ID=gene-CYJ02_RS01960;Name=CYJ02_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01960;old_locus_tag=CYJ02_01960 NZ_PJUQ01000003.1 Protein Homology CDS 139 2178 . - 0 ID=cds-WP_233517354.1;Parent=gene-CYJ02_RS01960;Dbxref=GenBank:WP_233517354.1;Name=WP_233517354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=CYJ02_RS01960;product=HelD family protein;protein_id=WP_233517354.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 2203 3411 . - . ID=gene-CYJ02_RS01965;Name=CYJ02_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01965;old_locus_tag=CYJ02_01965 NZ_PJUQ01000003.1 Protein Homology CDS 2203 3411 . - 0 ID=cds-WP_101431317.1;Parent=gene-CYJ02_RS01965;Dbxref=GenBank:WP_101431317.1;Name=WP_101431317.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ02_RS01965;product=MFS transporter;protein_id=WP_101431317.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 3392 3928 . - . ID=gene-CYJ02_RS01970;Name=CYJ02_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01970;old_locus_tag=CYJ02_01970 NZ_PJUQ01000003.1 Protein Homology CDS 3392 3928 . - 0 ID=cds-WP_233506577.1;Parent=gene-CYJ02_RS01970;Dbxref=GenBank:WP_233506577.1;Name=WP_233506577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219585.1;locus_tag=CYJ02_RS01970;product=hypothetical protein;protein_id=WP_233506577.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 3903 4379 . - . ID=gene-CYJ02_RS01975;Name=CYJ02_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01975;old_locus_tag=CYJ02_01975 NZ_PJUQ01000003.1 Protein Homology CDS 3903 4379 . - 0 ID=cds-WP_101431318.1;Parent=gene-CYJ02_RS01975;Dbxref=GenBank:WP_101431318.1;Name=WP_101431318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=CYJ02_RS01975;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_101431318.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 4413 4907 . + . ID=gene-CYJ02_RS01980;Name=CYJ02_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01980;old_locus_tag=CYJ02_01980 NZ_PJUQ01000003.1 Protein Homology CDS 4413 4907 . + 0 ID=cds-WP_014614293.1;Parent=gene-CYJ02_RS01980;Dbxref=GenBank:WP_014614293.1;Name=WP_014614293.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.7;locus_tag=CYJ02_RS01980;product=GNAT family N-acetyltransferase;protein_id=WP_014614293.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 4891 5715 . - . ID=gene-CYJ02_RS01985;Name=CYJ02_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01985;old_locus_tag=CYJ02_01985 NZ_PJUQ01000003.1 Protein Homology CDS 4891 5715 . - 0 ID=cds-WP_101431319.1;Parent=gene-CYJ02_RS01985;Dbxref=GenBank:WP_101431319.1;Name=WP_101431319.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.7;locus_tag=CYJ02_RS01985;product=serine/threonine-protein kinase;protein_id=WP_101431319.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 5682 6050 . - . ID=gene-CYJ02_RS01990;Name=CYJ02_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS01990;old_locus_tag=CYJ02_01990 NZ_PJUQ01000003.1 Protein Homology CDS 5682 6050 . - 0 ID=cds-WP_014614295.1;Parent=gene-CYJ02_RS01990;Dbxref=GenBank:WP_014614295.1;Name=WP_014614295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614295.1;locus_tag=CYJ02_RS01990;product=glycine-rich domain-containing protein;protein_id=WP_014614295.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq pseudogene 6482 6799 . + . ID=gene-CYJ02_RS02000;Name=CYJ02_RS02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS02000;old_locus_tag=CYJ02_02000;partial=true;pseudo=true;start_range=.,6482 NZ_PJUQ01000003.1 Protein Homology CDS 6482 6799 . + 0 ID=cds-CYJ02_RS02000;Parent=gene-CYJ02_RS02000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ02_RS02000;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,6482;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 7190 7825 . - . ID=gene-CYJ02_RS02005;Name=CYJ02_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02005;old_locus_tag=CYJ02_02005 NZ_PJUQ01000003.1 Protein Homology CDS 7190 7825 . - 0 ID=cds-WP_014614297.1;Parent=gene-CYJ02_RS02005;Dbxref=GenBank:WP_014614297.1;Name=WP_014614297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614297.1;locus_tag=CYJ02_RS02005;product=PepSY domain-containing protein;protein_id=WP_014614297.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 7935 9266 . - . ID=gene-CYJ02_RS02010;Name=CYJ02_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02010;old_locus_tag=CYJ02_02010 NZ_PJUQ01000003.1 Protein Homology CDS 7935 9266 . - 0 ID=cds-WP_101431320.1;Parent=gene-CYJ02_RS02010;Dbxref=GenBank:WP_101431320.1;Name=WP_101431320.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=CYJ02_RS02010;product=glycosyltransferase;protein_id=WP_101431320.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 9314 10129 . - . ID=gene-CYJ02_RS02015;Name=CYJ02_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02015;old_locus_tag=CYJ02_02015 NZ_PJUQ01000003.1 Protein Homology CDS 9314 10129 . - 0 ID=cds-WP_101431321.1;Parent=gene-CYJ02_RS02015;Dbxref=GenBank:WP_101431321.1;Name=WP_101431321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=CYJ02_RS02015;product=glycosyl transferase;protein_id=WP_101431321.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 10149 11069 . - . ID=gene-CYJ02_RS02020;Name=CYJ02_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02020;old_locus_tag=CYJ02_02020 NZ_PJUQ01000003.1 Protein Homology CDS 10149 11069 . - 0 ID=cds-WP_014614300.1;Parent=gene-CYJ02_RS02020;Dbxref=GenBank:WP_014614300.1;Name=WP_014614300.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614300.1;locus_tag=CYJ02_RS02020;product=ABC transporter ATP-binding protein;protein_id=WP_014614300.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 11075 12265 . - . ID=gene-CYJ02_RS02025;Name=CYJ02_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02025;old_locus_tag=CYJ02_02025 NZ_PJUQ01000003.1 Protein Homology CDS 11075 12265 . - 0 ID=cds-WP_101431322.1;Parent=gene-CYJ02_RS02025;Dbxref=GenBank:WP_101431322.1;Name=WP_101431322.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=CYJ02_RS02025;product=glycosyltransferase family 4 protein;protein_id=WP_101431322.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 12277 13086 . - . ID=gene-CYJ02_RS02030;Name=CYJ02_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02030;old_locus_tag=CYJ02_02030 NZ_PJUQ01000003.1 Protein Homology CDS 12277 13086 . - 0 ID=cds-WP_014614302.1;Parent=gene-CYJ02_RS02030;Dbxref=GenBank:WP_014614302.1;Name=WP_014614302.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=CYJ02_RS02030;product=ABC transporter permease;protein_id=WP_014614302.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 13083 14951 . - . ID=gene-CYJ02_RS02035;Name=CYJ02_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02035;old_locus_tag=CYJ02_02035 NZ_PJUQ01000003.1 Protein Homology CDS 13083 14951 . - 0 ID=cds-WP_230314568.1;Parent=gene-CYJ02_RS02035;Dbxref=GenBank:WP_230314568.1;Name=WP_230314568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=CYJ02_RS02035;product=hypothetical protein;protein_id=WP_230314568.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 14964 17525 . - . ID=gene-CYJ02_RS02040;Name=CYJ02_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02040;old_locus_tag=CYJ02_02040 NZ_PJUQ01000003.1 Protein Homology CDS 14964 17525 . - 0 ID=cds-WP_101431323.1;Parent=gene-CYJ02_RS02040;Dbxref=GenBank:WP_101431323.1;Name=WP_101431323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=CYJ02_RS02040;product=glycosyltransferase;protein_id=WP_101431323.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 17485 18459 . - . ID=gene-CYJ02_RS02045;Name=CYJ02_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02045;old_locus_tag=CYJ02_02045 NZ_PJUQ01000003.1 Protein Homology CDS 17485 18459 . - 0 ID=cds-WP_101431324.1;Parent=gene-CYJ02_RS02045;Dbxref=GenBank:WP_101431324.1;Name=WP_101431324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167472.1;locus_tag=CYJ02_RS02045;product=hypothetical protein;protein_id=WP_101431324.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 18590 19864 . - . ID=gene-CYJ02_RS02050;Name=CYJ02_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02050;old_locus_tag=CYJ02_02050 NZ_PJUQ01000003.1 Protein Homology CDS 18590 19864 . - 0 ID=cds-WP_101431352.1;Parent=gene-CYJ02_RS02050;Dbxref=GenBank:WP_101431352.1;Name=WP_101431352.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728936.1;locus_tag=CYJ02_RS02050;product=nucleotide sugar dehydrogenase;protein_id=WP_101431352.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 20521 22164 . - . ID=gene-CYJ02_RS02055;Name=CYJ02_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02055;old_locus_tag=CYJ02_02055 NZ_PJUQ01000003.1 Protein Homology CDS 20521 22164 . - 0 ID=cds-WP_198586529.1;Parent=gene-CYJ02_RS02055;Dbxref=GenBank:WP_198586529.1;Name=WP_198586529.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614307.1;locus_tag=CYJ02_RS02055;product=phospho-sugar mutase;protein_id=WP_198586529.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 22396 23574 . + . ID=gene-CYJ02_RS02060;Name=CYJ02_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02060;old_locus_tag=CYJ02_02060 NZ_PJUQ01000003.1 Protein Homology CDS 22396 23574 . + 0 ID=cds-WP_014614309.1;Parent=gene-CYJ02_RS02060;Dbxref=GenBank:WP_014614309.1;Name=WP_014614309.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220253.1;locus_tag=CYJ02_RS02060;product=LCP family protein;protein_id=WP_014614309.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 23589 24059 . + . ID=gene-CYJ02_RS02065;Name=CYJ02_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02065;old_locus_tag=CYJ02_02065 NZ_PJUQ01000003.1 Protein Homology CDS 23589 24059 . + 0 ID=cds-WP_065354434.1;Parent=gene-CYJ02_RS02065;Dbxref=GenBank:WP_065354434.1;Name=WP_065354434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=CYJ02_RS02065;product=DUF2538 family protein;protein_id=WP_065354434.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 24254 24682 . + . ID=gene-CYJ02_RS02070;Name=CYJ02_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02070;old_locus_tag=CYJ02_02070 NZ_PJUQ01000003.1 Protein Homology CDS 24254 24682 . + 0 ID=cds-WP_014614311.1;Parent=gene-CYJ02_RS02070;Dbxref=GenBank:WP_014614311.1;Name=WP_014614311.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614311.1;locus_tag=CYJ02_RS02070;product=GNAT family N-acetyltransferase;protein_id=WP_014614311.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 25011 29177 . + . ID=gene-CYJ02_RS02075;Name=CYJ02_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02075;old_locus_tag=CYJ02_02075 NZ_PJUQ01000003.1 Protein Homology CDS 25011 29177 . + 0 ID=cds-WP_101431326.1;Parent=gene-CYJ02_RS02075;Dbxref=GenBank:WP_101431326.1;Name=WP_101431326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614312.1;locus_tag=CYJ02_RS02075;product=GW dipeptide domain-containing protein;protein_id=WP_101431326.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 29626 31431 . - . ID=gene-CYJ02_RS02080;Name=CYJ02_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02080;old_locus_tag=CYJ02_02080 NZ_PJUQ01000003.1 Protein Homology CDS 29626 31431 . - 0 ID=cds-WP_070407587.1;Parent=gene-CYJ02_RS02080;Dbxref=GenBank:WP_070407587.1;Name=WP_070407587.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614313.1;locus_tag=CYJ02_RS02080;product=acyltransferase family protein;protein_id=WP_070407587.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 31790 32800 . + . ID=gene-CYJ02_RS02085;Name=CYJ02_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02085;old_locus_tag=CYJ02_02085 NZ_PJUQ01000003.1 Protein Homology CDS 31790 32800 . + 0 ID=cds-WP_063278798.1;Parent=gene-CYJ02_RS02085;Dbxref=GenBank:WP_063278798.1;Name=WP_063278798.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=CYJ02_RS02085;product=acyltransferase family protein;protein_id=WP_063278798.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 32915 34075 . + . ID=gene-CYJ02_RS02090;Name=CYJ02_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02090;old_locus_tag=CYJ02_02090 NZ_PJUQ01000003.1 Protein Homology CDS 32915 34075 . + 0 ID=cds-WP_101431327.1;Parent=gene-CYJ02_RS02090;Dbxref=GenBank:WP_101431327.1;Name=WP_101431327.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165632.1;locus_tag=CYJ02_RS02090;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_101431327.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 34265 35083 . - . ID=gene-CYJ02_RS02095;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CYJ02_RS02095;old_locus_tag=CYJ02_02095 NZ_PJUQ01000003.1 Protein Homology CDS 34265 35083 . - 0 ID=cds-WP_014614316.1;Parent=gene-CYJ02_RS02095;Dbxref=GenBank:WP_014614316.1;Name=WP_014614316.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CYJ02_RS02095;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014614316.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 35100 35891 . - . ID=gene-CYJ02_RS02100;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CYJ02_RS02100;old_locus_tag=CYJ02_02100 NZ_PJUQ01000003.1 Protein Homology CDS 35100 35891 . - 0 ID=cds-WP_015728931.1;Parent=gene-CYJ02_RS02100;Dbxref=GenBank:WP_015728931.1;Name=WP_015728931.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220255.1;locus_tag=CYJ02_RS02100;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_015728931.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 35878 37548 . - . ID=gene-CYJ02_RS02105;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02105;old_locus_tag=CYJ02_02105 NZ_PJUQ01000003.1 Protein Homology CDS 35878 37548 . - 0 ID=cds-WP_101431328.1;Parent=gene-CYJ02_RS02105;Dbxref=GenBank:WP_101431328.1;Name=WP_101431328.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165634.1;locus_tag=CYJ02_RS02105;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_101431328.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 37541 38899 . - . ID=gene-CYJ02_RS02110;Name=CYJ02_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02110;old_locus_tag=CYJ02_02110 NZ_PJUQ01000003.1 Protein Homology CDS 37541 38899 . - 0 ID=cds-WP_101431329.1;Parent=gene-CYJ02_RS02110;Dbxref=GenBank:WP_101431329.1;Name=WP_101431329.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=CYJ02_RS02110;product=isochorismate synthase;protein_id=WP_101431329.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 39073 40011 . + . ID=gene-CYJ02_RS02115;Name=CYJ02_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02115;old_locus_tag=CYJ02_02115 NZ_PJUQ01000003.1 Protein Homology CDS 39073 40011 . + 0 ID=cds-WP_014614320.1;Parent=gene-CYJ02_RS02115;Dbxref=GenBank:WP_014614320.1;Name=WP_014614320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=CYJ02_RS02115;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_014614320.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 40327 41091 . - . ID=gene-CYJ02_RS02120;Name=CYJ02_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02120;old_locus_tag=CYJ02_02120 NZ_PJUQ01000003.1 Protein Homology CDS 40327 41091 . - 0 ID=cds-WP_015728929.1;Parent=gene-CYJ02_RS02120;Dbxref=GenBank:WP_015728929.1;Name=WP_015728929.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165637.1;locus_tag=CYJ02_RS02120;product=ABC transporter permease;protein_id=WP_015728929.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 41088 41738 . - . ID=gene-CYJ02_RS02125;Name=CYJ02_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02125;old_locus_tag=CYJ02_02125 NZ_PJUQ01000003.1 Protein Homology CDS 41088 41738 . - 0 ID=cds-WP_101431330.1;Parent=gene-CYJ02_RS02125;Dbxref=GenBank:WP_101431330.1;Name=WP_101431330.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=CYJ02_RS02125;product=ABC transporter ATP-binding protein;protein_id=WP_101431330.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 41731 42306 . - . ID=gene-CYJ02_RS02130;Name=CYJ02_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02130;old_locus_tag=CYJ02_02130 NZ_PJUQ01000003.1 Protein Homology CDS 41731 42306 . - 0 ID=cds-WP_020220256.1;Parent=gene-CYJ02_RS02130;Dbxref=GenBank:WP_020220256.1;Name=WP_020220256.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=CYJ02_RS02130;product=GNAT family N-acetyltransferase;protein_id=WP_020220256.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 42445 42855 . + . ID=gene-CYJ02_RS02135;Name=CYJ02_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02135;old_locus_tag=CYJ02_02135 NZ_PJUQ01000003.1 Protein Homology CDS 42445 42855 . + 0 ID=cds-WP_015728927.1;Parent=gene-CYJ02_RS02135;Dbxref=GenBank:WP_015728927.1;Name=WP_015728927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728927.1;locus_tag=CYJ02_RS02135;product=YolD-like family protein;protein_id=WP_015728927.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 43002 43604 . - . ID=gene-CYJ02_RS02140;Name=CYJ02_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02140;old_locus_tag=CYJ02_02140 NZ_PJUQ01000003.1 Protein Homology CDS 43002 43604 . - 0 ID=cds-WP_101431331.1;Parent=gene-CYJ02_RS02140;Dbxref=GenBank:WP_101431331.1;Name=WP_101431331.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=CYJ02_RS02140;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_101431331.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 43611 43796 . - . ID=gene-CYJ02_RS02145;Name=CYJ02_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02145;old_locus_tag=CYJ02_02145 NZ_PJUQ01000003.1 Protein Homology CDS 43611 43796 . - 0 ID=cds-WP_014614328.1;Parent=gene-CYJ02_RS02145;Dbxref=GenBank:WP_014614328.1;Name=WP_014614328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=CYJ02_RS02145;product=YkvS family protein;protein_id=WP_014614328.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 43984 44976 . + . ID=gene-CYJ02_RS02150;Name=CYJ02_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02150;old_locus_tag=CYJ02_02150 NZ_PJUQ01000003.1 Protein Homology CDS 43984 44976 . + 0 ID=cds-WP_015728926.1;Parent=gene-CYJ02_RS02150;Dbxref=GenBank:WP_015728926.1;Name=WP_015728926.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=CYJ02_RS02150;product=lipoate--protein ligase;protein_id=WP_015728926.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 45198 45416 . - . ID=gene-CYJ02_RS02155;Name=CYJ02_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02155;old_locus_tag=CYJ02_02155 NZ_PJUQ01000003.1 Protein Homology CDS 45198 45416 . - 0 ID=cds-WP_014614330.1;Parent=gene-CYJ02_RS02155;Dbxref=GenBank:WP_014614330.1;Name=WP_014614330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=CYJ02_RS02155;product=IDEAL domain-containing protein;protein_id=WP_014614330.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 45653 46270 . + . ID=gene-CYJ02_RS02160;Name=CYJ02_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02160;old_locus_tag=CYJ02_02160 NZ_PJUQ01000003.1 Protein Homology CDS 45653 46270 . + 0 ID=cds-WP_015728925.1;Parent=gene-CYJ02_RS02160;Dbxref=GenBank:WP_015728925.1;Name=WP_015728925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614331.1;locus_tag=CYJ02_RS02160;product=competence protein ComK;protein_id=WP_015728925.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 46483 46557 . + . ID=gene-CYJ02_RS02165;Name=CYJ02_RS02165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS02165;old_locus_tag=CYJ02_02165 NZ_PJUQ01000003.1 tRNAscan-SE tRNA 46483 46557 . + . ID=rna-CYJ02_RS02165;Parent=gene-CYJ02_RS02165;anticodon=(pos:46515..46517);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02165;product=tRNA-Asn NZ_PJUQ01000003.1 tRNAscan-SE exon 46483 46557 . + . ID=exon-CYJ02_RS02165-1;Parent=rna-CYJ02_RS02165;anticodon=(pos:46515..46517);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02165;product=tRNA-Asn NZ_PJUQ01000003.1 RefSeq gene 46559 46630 . + . ID=gene-CYJ02_RS02170;Name=CYJ02_RS02170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS02170;old_locus_tag=CYJ02_02170 NZ_PJUQ01000003.1 tRNAscan-SE tRNA 46559 46630 . + . ID=rna-CYJ02_RS02170;Parent=gene-CYJ02_RS02170;anticodon=(pos:46592..46594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02170;product=tRNA-Glu NZ_PJUQ01000003.1 tRNAscan-SE exon 46559 46630 . + . ID=exon-CYJ02_RS02170-1;Parent=rna-CYJ02_RS02170;anticodon=(pos:46592..46594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02170;product=tRNA-Glu NZ_PJUQ01000003.1 RefSeq gene 46680 46768 . + . ID=gene-CYJ02_RS02175;Name=CYJ02_RS02175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS02175;old_locus_tag=CYJ02_02175 NZ_PJUQ01000003.1 tRNAscan-SE tRNA 46680 46768 . + . ID=rna-CYJ02_RS02175;Parent=gene-CYJ02_RS02175;anticodon=(pos:46715..46717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02175;product=tRNA-Ser NZ_PJUQ01000003.1 tRNAscan-SE exon 46680 46768 . + . ID=exon-CYJ02_RS02175-1;Parent=rna-CYJ02_RS02175;anticodon=(pos:46715..46717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS02175;product=tRNA-Ser NZ_PJUQ01000003.1 RefSeq gene 47386 47490 . + . ID=gene-CYJ02_RS02180;Name=CYJ02_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02180;old_locus_tag=CYJ02_02180 NZ_PJUQ01000003.1 Protein Homology CDS 47386 47490 . + 0 ID=cds-WP_101431332.1;Parent=gene-CYJ02_RS02180;Dbxref=GenBank:WP_101431332.1;Name=WP_101431332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.7;locus_tag=CYJ02_RS02180;product=putative holin-like toxin;protein_id=WP_101431332.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 47865 49259 . + . ID=gene-CYJ02_RS02185;Name=CYJ02_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02185;old_locus_tag=CYJ02_02185 NZ_PJUQ01000003.1 Protein Homology CDS 47865 49259 . + 0 ID=cds-WP_241900546.1;Parent=gene-CYJ02_RS02185;Dbxref=GenBank:WP_241900546.1;Name=WP_241900546.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219639.1;locus_tag=CYJ02_RS02185;product=minor capsid protein;protein_id=WP_241900546.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 49271 49513 . + . ID=gene-CYJ02_RS02190;Name=CYJ02_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02190;old_locus_tag=CYJ02_02190 NZ_PJUQ01000003.1 Protein Homology CDS 49271 49513 . + 0 ID=cds-WP_020219638.1;Parent=gene-CYJ02_RS02190;Dbxref=GenBank:WP_020219638.1;Name=WP_020219638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219638.1;locus_tag=CYJ02_RS02190;product=hypothetical protein;protein_id=WP_020219638.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 49698 50267 . + . ID=gene-CYJ02_RS02195;Name=CYJ02_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02195;old_locus_tag=CYJ02_02195 NZ_PJUQ01000003.1 Protein Homology CDS 49698 50267 . + 0 ID=cds-WP_101431333.1;Parent=gene-CYJ02_RS02195;Dbxref=GenBank:WP_101431333.1;Name=WP_101431333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ02_RS02195;product=DUF4355 domain-containing protein;protein_id=WP_101431333.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 50282 50533 . + . ID=gene-CYJ02_RS02200;Name=CYJ02_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02200;old_locus_tag=CYJ02_02200 NZ_PJUQ01000003.1 Protein Homology CDS 50282 50533 . + 0 ID=cds-WP_063284422.1;Parent=gene-CYJ02_RS02200;Dbxref=GenBank:WP_063284422.1;Name=WP_063284422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729310.1;locus_tag=CYJ02_RS02200;product=hypothetical protein;protein_id=WP_063284422.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 50587 51189 . - . ID=gene-CYJ02_RS02205;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02205;old_locus_tag=CYJ02_02205 NZ_PJUQ01000003.1 Protein Homology CDS 50587 51189 . - 0 ID=cds-WP_014613654.1;Parent=gene-CYJ02_RS02205;Dbxref=GenBank:WP_014613654.1;Name=WP_014613654.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CYJ02_RS02205;product=30S ribosomal protein S4;protein_id=WP_014613654.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 51424 51879 . - . ID=gene-CYJ02_RS02210;Name=CYJ02_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02210;old_locus_tag=CYJ02_02210 NZ_PJUQ01000003.1 Protein Homology CDS 51424 51879 . - 0 ID=cds-WP_063278930.1;Parent=gene-CYJ02_RS02210;Dbxref=GenBank:WP_063278930.1;Name=WP_063278930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613655.1;locus_tag=CYJ02_RS02210;product=GAF domain-containing protein;protein_id=WP_063278930.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 52062 53762 . + . ID=gene-CYJ02_RS02215;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02215;old_locus_tag=CYJ02_02215 NZ_PJUQ01000003.1 Protein Homology CDS 52062 53762 . + 0 ID=cds-WP_014613656.1;Parent=gene-CYJ02_RS02215;Dbxref=GenBank:WP_014613656.1;Name=WP_014613656.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613656.1;locus_tag=CYJ02_RS02215;product=septation ring formation regulator EzrA;protein_id=WP_014613656.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 53987 55123 . + . ID=gene-CYJ02_RS02220;Name=CYJ02_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02220;old_locus_tag=CYJ02_02220 NZ_PJUQ01000003.1 Protein Homology CDS 53987 55123 . + 0 ID=cds-WP_065354171.1;Parent=gene-CYJ02_RS02220;Dbxref=GenBank:WP_065354171.1;Name=WP_065354171.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=CYJ02_RS02220;product=cysteine desulfurase family protein;protein_id=WP_065354171.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 55120 56340 . + . ID=gene-CYJ02_RS02225;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CYJ02_RS02225;old_locus_tag=CYJ02_02225 NZ_PJUQ01000003.1 Protein Homology CDS 55120 56340 . + 0 ID=cds-WP_015729306.1;Parent=gene-CYJ02_RS02225;Dbxref=GenBank:WP_015729306.1;Name=WP_015729306.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165374.1;locus_tag=CYJ02_RS02225;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_015729306.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 56356 57129 . + . ID=gene-CYJ02_RS02230;Name=CYJ02_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02230;old_locus_tag=CYJ02_02230 NZ_PJUQ01000003.1 Protein Homology CDS 56356 57129 . + 0 ID=cds-WP_014613659.1;Parent=gene-CYJ02_RS02230;Dbxref=GenBank:WP_014613659.1;Name=WP_014613659.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613659.1;locus_tag=CYJ02_RS02230;product=TSUP family transporter;protein_id=WP_014613659.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 57287 58279 . + . ID=gene-CYJ02_RS02235;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02235;old_locus_tag=CYJ02_02235 NZ_PJUQ01000003.1 Protein Homology CDS 57287 58279 . + 0 ID=cds-WP_100006547.1;Parent=gene-CYJ02_RS02235;Dbxref=GenBank:WP_100006547.1;Name=WP_100006547.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613660.1;locus_tag=CYJ02_RS02235;product=signal peptide peptidase SppA;protein_id=WP_100006547.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 58289 58873 . + . ID=gene-CYJ02_RS02240;Name=CYJ02_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02240;old_locus_tag=CYJ02_02240 NZ_PJUQ01000003.1 Protein Homology CDS 58289 58873 . + 0 ID=cds-WP_014613661.1;Parent=gene-CYJ02_RS02240;Dbxref=GenBank:WP_014613661.1;Name=WP_014613661.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613661.1;locus_tag=CYJ02_RS02240;product=RDD family protein;protein_id=WP_014613661.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 58937 59431 . + . ID=gene-CYJ02_RS02245;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CYJ02_RS02245;old_locus_tag=CYJ02_02245 NZ_PJUQ01000003.1 Protein Homology CDS 58937 59431 . + 0 ID=cds-WP_014613662.1;Parent=gene-CYJ02_RS02245;Dbxref=GenBank:WP_014613662.1;Name=WP_014613662.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446674.1;locus_tag=CYJ02_RS02245;product=thiol peroxidase;protein_id=WP_014613662.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 59639 60586 . + . ID=gene-CYJ02_RS02250;Name=CYJ02_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02250;old_locus_tag=CYJ02_02250 NZ_PJUQ01000003.1 Protein Homology CDS 59639 60586 . + 0 ID=cds-WP_041613222.1;Parent=gene-CYJ02_RS02250;Dbxref=GenBank:WP_041613222.1;Name=WP_041613222.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722135.1;locus_tag=CYJ02_RS02250;product=class I SAM-dependent methyltransferase;protein_id=WP_041613222.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 60665 61867 . + . ID=gene-CYJ02_RS02255;Name=CYJ02_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02255;old_locus_tag=CYJ02_02255 NZ_PJUQ01000003.1 Protein Homology CDS 60665 61867 . + 0 ID=cds-WP_015729302.1;Parent=gene-CYJ02_RS02255;Dbxref=GenBank:WP_015729302.1;Name=WP_015729302.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729302.1;locus_tag=CYJ02_RS02255;product=acetate kinase;protein_id=WP_015729302.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 62127 62630 . - . ID=gene-CYJ02_RS02260;Name=CYJ02_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02260;old_locus_tag=CYJ02_02260 NZ_PJUQ01000003.1 Protein Homology CDS 62127 62630 . - 0 ID=cds-WP_014613665.1;Parent=gene-CYJ02_RS02260;Dbxref=GenBank:WP_014613665.1;Name=WP_014613665.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=CYJ02_RS02260;product=universal stress protein;protein_id=WP_014613665.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 62778 63899 . + . ID=gene-CYJ02_RS02265;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CYJ02_RS02265;old_locus_tag=CYJ02_02265 NZ_PJUQ01000003.1 Protein Homology CDS 62778 63899 . + 0 ID=cds-WP_014613666.1;Parent=gene-CYJ02_RS02265;Dbxref=GenBank:WP_014613666.1;Name=WP_014613666.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613666.1;locus_tag=CYJ02_RS02265;product=alanine dehydrogenase;protein_id=WP_014613666.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 63992 64627 . - . ID=gene-CYJ02_RS02270;Name=CYJ02_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02270;old_locus_tag=CYJ02_02270 NZ_PJUQ01000003.1 Protein Homology CDS 63992 64627 . - 0 ID=cds-WP_101431334.1;Parent=gene-CYJ02_RS02270;Dbxref=GenBank:WP_101431334.1;Name=WP_101431334.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220142.1;locus_tag=CYJ02_RS02270;product=copper homeostasis protein CutC;protein_id=WP_101431334.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 64624 65679 . - . ID=gene-CYJ02_RS02275;Name=CYJ02_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02275;old_locus_tag=CYJ02_02275 NZ_PJUQ01000003.1 Protein Homology CDS 64624 65679 . - 0 ID=cds-WP_014613668.1;Parent=gene-CYJ02_RS02275;Dbxref=GenBank:WP_014613668.1;Name=WP_014613668.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=CYJ02_RS02275;product=M24 family metallopeptidase;protein_id=WP_014613668.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 65936 66625 . + . ID=gene-CYJ02_RS02280;Name=CYJ02_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02280;old_locus_tag=CYJ02_02280 NZ_PJUQ01000003.1 Protein Homology CDS 65936 66625 . + 0 ID=cds-WP_014613669.1;Parent=gene-CYJ02_RS02280;Dbxref=GenBank:WP_014613669.1;Name=WP_014613669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613669.1;locus_tag=CYJ02_RS02280;product=metal-dependent hydrolase;protein_id=WP_014613669.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 67239 67652 . - . ID=gene-CYJ02_RS02285;Name=CYJ02_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02285;old_locus_tag=CYJ02_02285 NZ_PJUQ01000003.1 Protein Homology CDS 67239 67652 . - 0 ID=cds-WP_101431335.1;Parent=gene-CYJ02_RS02285;Dbxref=GenBank:WP_101431335.1;Name=WP_101431335.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=CYJ02_RS02285;product=universal stress protein;protein_id=WP_101431335.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 67973 69268 . + . ID=gene-CYJ02_RS02290;Name=CYJ02_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02290;old_locus_tag=CYJ02_02290 NZ_PJUQ01000003.1 Protein Homology CDS 67973 69268 . + 0 ID=cds-WP_014613671.1;Parent=gene-CYJ02_RS02290;Dbxref=GenBank:WP_014613671.1;Name=WP_014613671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=CYJ02_RS02290;product=DRTGG domain-containing protein;protein_id=WP_014613671.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 69281 70213 . + . ID=gene-CYJ02_RS02295;Name=CYJ02_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02295;old_locus_tag=CYJ02_02295 NZ_PJUQ01000003.1 Protein Homology CDS 69281 70213 . + 0 ID=cds-WP_037542826.1;Parent=gene-CYJ02_RS02295;Dbxref=GenBank:WP_037542826.1;Name=WP_037542826.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613672.1;locus_tag=CYJ02_RS02295;product=DHH family phosphoesterase;protein_id=WP_037542826.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 70238 73429 . + . ID=gene-CYJ02_RS02300;Name=CYJ02_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02300;old_locus_tag=CYJ02_02300 NZ_PJUQ01000003.1 Protein Homology CDS 70238 73429 . + 0 ID=cds-WP_101431336.1;Parent=gene-CYJ02_RS02300;Dbxref=GenBank:WP_101431336.1;Name=WP_101431336.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=CYJ02_RS02300;product=DNA polymerase III subunit alpha;protein_id=WP_101431336.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 73572 74804 . + . ID=gene-CYJ02_RS02305;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=CYJ02_RS02305;old_locus_tag=CYJ02_02305 NZ_PJUQ01000003.1 Protein Homology CDS 73572 74804 . + 0 ID=cds-WP_014613674.1;Parent=gene-CYJ02_RS02305;Dbxref=GenBank:WP_014613674.1;Name=WP_014613674.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613674.1;locus_tag=CYJ02_RS02305;product=NADP-dependent malic enzyme;protein_id=WP_014613674.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 74849 75709 . + . ID=gene-CYJ02_RS02310;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02310;old_locus_tag=CYJ02_02310 NZ_PJUQ01000003.1 Protein Homology CDS 74849 75709 . + 0 ID=cds-WP_014613675.1;Parent=gene-CYJ02_RS02310;Dbxref=GenBank:WP_014613675.1;Name=WP_014613675.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500314.1;locus_tag=CYJ02_RS02310;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_014613675.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 75709 76653 . + . ID=gene-CYJ02_RS02315;Name=CYJ02_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02315;old_locus_tag=CYJ02_02315 NZ_PJUQ01000003.1 Protein Homology CDS 75709 76653 . + 0 ID=cds-WP_096547995.1;Parent=gene-CYJ02_RS02315;Dbxref=GenBank:WP_096547995.1;Name=WP_096547995.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=CYJ02_RS02315;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_096547995.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 77217 78185 . + . ID=gene-CYJ02_RS02320;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02320;old_locus_tag=CYJ02_02320 NZ_PJUQ01000003.1 Protein Homology CDS 77217 78185 . + 0 ID=cds-WP_014613677.1;Parent=gene-CYJ02_RS02320;Dbxref=GenBank:WP_014613677.1;Name=WP_014613677.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=CYJ02_RS02320;product=6-phosphofructokinase;protein_id=WP_014613677.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 78204 79964 . + . ID=gene-CYJ02_RS02325;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CYJ02_RS02325;old_locus_tag=CYJ02_02325 NZ_PJUQ01000003.1 Protein Homology CDS 78204 79964 . + 0 ID=cds-WP_014613678.1;Parent=gene-CYJ02_RS02325;Dbxref=GenBank:WP_014613678.1;Name=WP_014613678.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=CYJ02_RS02325;product=pyruvate kinase;protein_id=WP_014613678.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 80388 81506 . + . ID=gene-CYJ02_RS02330;Name=CYJ02_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02330;old_locus_tag=CYJ02_02330 NZ_PJUQ01000003.1 Protein Homology CDS 80388 81506 . + 0 ID=cds-WP_014613679.1;Parent=gene-CYJ02_RS02330;Dbxref=GenBank:WP_014613679.1;Name=WP_014613679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453430.1;locus_tag=CYJ02_RS02330;product=citrate synthase;protein_id=WP_014613679.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 81522 82814 . + . ID=gene-CYJ02_RS02335;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CYJ02_RS02335;old_locus_tag=CYJ02_02335 NZ_PJUQ01000003.1 Protein Homology CDS 81522 82814 . + 0 ID=cds-WP_257784255.1;Parent=gene-CYJ02_RS02335;Dbxref=GenBank:WP_257784255.1;Name=WP_257784255.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=CYJ02_RS02335;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_257784255.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 83133 83837 . + . ID=gene-CYJ02_RS02340;Name=CYJ02_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02340;old_locus_tag=CYJ02_02340 NZ_PJUQ01000003.1 Protein Homology CDS 83133 83837 . + 0 ID=cds-WP_014613681.1;Parent=gene-CYJ02_RS02340;Dbxref=GenBank:WP_014613681.1;Name=WP_014613681.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=CYJ02_RS02340;product=response regulator transcription factor;protein_id=WP_014613681.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 83838 85538 . + . ID=gene-CYJ02_RS02345;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02345;old_locus_tag=CYJ02_02345 NZ_PJUQ01000003.1 Protein Homology CDS 83838 85538 . + 0 ID=cds-WP_101431337.1;Parent=gene-CYJ02_RS02345;Dbxref=GenBank:WP_101431337.1;Name=WP_101431337.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=CYJ02_RS02345;product=two-component system histidine kinase PnpS;protein_id=WP_101431337.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 86271 88898 . + . ID=gene-CYJ02_RS02350;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02350;old_locus_tag=CYJ02_02350 NZ_PJUQ01000003.1 Protein Homology CDS 86271 88898 . + 0 ID=cds-WP_100007211.1;Parent=gene-CYJ02_RS02350;Dbxref=GenBank:WP_100007211.1;Name=WP_100007211.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=CYJ02_RS02350;product=DNA polymerase I;protein_id=WP_100007211.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 88918 89790 . + . ID=gene-CYJ02_RS02355;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CYJ02_RS02355;old_locus_tag=CYJ02_02355 NZ_PJUQ01000003.1 Protein Homology CDS 88918 89790 . + 0 ID=cds-WP_014613684.1;Parent=gene-CYJ02_RS02355;Dbxref=GenBank:WP_014613684.1;Name=WP_014613684.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=CYJ02_RS02355;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_014613684.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 89804 90427 . + . ID=gene-CYJ02_RS02360;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CYJ02_RS02360;old_locus_tag=CYJ02_02360 NZ_PJUQ01000003.1 Protein Homology CDS 89804 90427 . + 0 ID=cds-WP_014613685.1;Parent=gene-CYJ02_RS02360;Dbxref=GenBank:WP_014613685.1;Name=WP_014613685.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613685.1;locus_tag=CYJ02_RS02360;product=dephospho-CoA kinase;protein_id=WP_014613685.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 90634 91650 . + . ID=gene-CYJ02_RS02365;Name=CYJ02_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02365;old_locus_tag=CYJ02_02365 NZ_PJUQ01000003.1 Protein Homology CDS 90634 91650 . + 0 ID=cds-WP_037542830.1;Parent=gene-CYJ02_RS02365;Dbxref=GenBank:WP_037542830.1;Name=WP_037542830.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=CYJ02_RS02365;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037542830.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 91847 92314 . + . ID=gene-CYJ02_RS02370;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CYJ02_RS02370;old_locus_tag=CYJ02_02370 NZ_PJUQ01000003.1 Protein Homology CDS 91847 92314 . + 0 ID=cds-WP_014613687.1;Parent=gene-CYJ02_RS02370;Dbxref=GenBank:WP_014613687.1;Name=WP_014613687.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=CYJ02_RS02370;product=transcriptional regulator NrdR;protein_id=WP_014613687.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 92318 93691 . + . ID=gene-CYJ02_RS02375;Name=CYJ02_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02375;old_locus_tag=CYJ02_02375 NZ_PJUQ01000003.1 Protein Homology CDS 92318 93691 . + 0 ID=cds-WP_101431338.1;Parent=gene-CYJ02_RS02375;Dbxref=GenBank:WP_101431338.1;Name=WP_101431338.1;Ontology_term=GO:0006260,GO:0003677,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=CYJ02_RS02375;product=replication initiation and membrane attachment family protein;protein_id=WP_101431338.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 93691 94614 . + . ID=gene-CYJ02_RS02380;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=CYJ02_RS02380;old_locus_tag=CYJ02_02380 NZ_PJUQ01000003.1 Protein Homology CDS 93691 94614 . + 0 ID=cds-WP_014613689.1;Parent=gene-CYJ02_RS02380;Dbxref=GenBank:WP_014613689.1;Name=WP_014613689.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670575.1;locus_tag=CYJ02_RS02380;product=primosomal protein DnaI;protein_id=WP_014613689.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 94932 96869 . + . ID=gene-CYJ02_RS02385;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02385;old_locus_tag=CYJ02_02385 NZ_PJUQ01000003.1 Protein Homology CDS 94932 96869 . + 0 ID=cds-WP_014613690.1;Parent=gene-CYJ02_RS02385;Dbxref=GenBank:WP_014613690.1;Name=WP_014613690.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=CYJ02_RS02385;product=threonine--tRNA ligase;protein_id=WP_014613690.1;transl_table=11 NZ_PJUQ01000003.1 cmsearch riboswitch 96930 97101 . + . ID=id-NZ_PJUQ01000003.1:96930..97101;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000003.1 RefSeq gene 97237 98745 . + . ID=gene-CYJ02_RS02390;Name=CYJ02_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02390;old_locus_tag=CYJ02_02390 NZ_PJUQ01000003.1 Protein Homology CDS 97237 98745 . + 0 ID=cds-WP_014613691.1;Parent=gene-CYJ02_RS02390;Dbxref=GenBank:WP_014613691.1;Name=WP_014613691.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613691.1;locus_tag=CYJ02_RS02390;product=amino acid permease;protein_id=WP_014613691.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 98762 98899 . + . ID=gene-CYJ02_RS12365;Name=CYJ02_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12365 NZ_PJUQ01000003.1 Protein Homology CDS 98762 98899 . + 0 ID=cds-WP_014613692.1;Parent=gene-CYJ02_RS12365;Dbxref=GenBank:WP_014613692.1;Name=WP_014613692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613692.1;locus_tag=CYJ02_RS12365;product=hypothetical protein;protein_id=WP_014613692.1;transl_table=11 NZ_PJUQ01000003.1 cmsearch sequence_feature 98787 98923 . + . ID=id-NZ_PJUQ01000003.1:98787..98923;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000003.1 RefSeq gene 98948 99475 . + . ID=gene-CYJ02_RS02395;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CYJ02_RS02395;old_locus_tag=CYJ02_02395 NZ_PJUQ01000003.1 Protein Homology CDS 98948 99475 . + 0 ID=cds-WP_014613693.1;Parent=gene-CYJ02_RS02395;Dbxref=GenBank:WP_014613693.1;Name=WP_014613693.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=CYJ02_RS02395;product=translation initiation factor IF-3;protein_id=WP_014613693.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 99501 99701 . + . ID=gene-CYJ02_RS02400;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CYJ02_RS02400;old_locus_tag=CYJ02_02400 NZ_PJUQ01000003.1 Protein Homology CDS 99501 99701 . + 0 ID=cds-WP_014613694.1;Parent=gene-CYJ02_RS02400;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CYJ02_RS02400;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 99776 100132 . + . ID=gene-CYJ02_RS02405;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CYJ02_RS02405;old_locus_tag=CYJ02_02405 NZ_PJUQ01000003.1 Protein Homology CDS 99776 100132 . + 0 ID=cds-WP_014613695.1;Parent=gene-CYJ02_RS02405;Dbxref=GenBank:WP_014613695.1;Name=WP_014613695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=CYJ02_RS02405;product=50S ribosomal protein L20;protein_id=WP_014613695.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 100242 100853 . + . ID=gene-CYJ02_RS02410;Name=CYJ02_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02410;old_locus_tag=CYJ02_02410 NZ_PJUQ01000003.1 Protein Homology CDS 100242 100853 . + 0 ID=cds-WP_014613696.1;Parent=gene-CYJ02_RS02410;Dbxref=GenBank:WP_014613696.1;Name=WP_014613696.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169473.1;locus_tag=CYJ02_RS02410;product=NUDIX domain-containing protein;protein_id=WP_014613696.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 100863 101786 . + . ID=gene-CYJ02_RS02415;Name=CYJ02_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02415;old_locus_tag=CYJ02_02415 NZ_PJUQ01000003.1 Protein Homology CDS 100863 101786 . + 0 ID=cds-WP_063284415.1;Parent=gene-CYJ02_RS02415;Dbxref=GenBank:WP_063284415.1;Name=WP_063284415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729287.1;locus_tag=CYJ02_RS02415;product=hypothetical protein;protein_id=WP_063284415.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 101874 103190 . + . ID=gene-CYJ02_RS02420;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CYJ02_RS02420;old_locus_tag=CYJ02_02420 NZ_PJUQ01000003.1 Protein Homology CDS 101874 103190 . + 0 ID=cds-WP_014613698.1;Parent=gene-CYJ02_RS02420;Dbxref=GenBank:WP_014613698.1;Name=WP_014613698.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=CYJ02_RS02420;product=trigger factor;protein_id=WP_014613698.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 103763 105025 . + . ID=gene-CYJ02_RS02425;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CYJ02_RS02425;old_locus_tag=CYJ02_02425 NZ_PJUQ01000003.1 Protein Homology CDS 103763 105025 . + 0 ID=cds-WP_101431339.1;Parent=gene-CYJ02_RS02425;Dbxref=GenBank:WP_101431339.1;Name=WP_101431339.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CYJ02_RS02425;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_101431339.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 105262 105858 . + . ID=gene-CYJ02_RS02430;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02430;old_locus_tag=CYJ02_02430 NZ_PJUQ01000003.1 Protein Homology CDS 105262 105858 . + 0 ID=cds-WP_014613700.1;Parent=gene-CYJ02_RS02430;Dbxref=GenBank:WP_014613700.1;Name=WP_014613700.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729284.1;locus_tag=CYJ02_RS02430;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014613700.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 106013 107353 . + . ID=gene-CYJ02_RS02435;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02435;old_locus_tag=CYJ02_02435 NZ_PJUQ01000003.1 Protein Homology CDS 106013 107353 . + 0 ID=cds-WP_015729283.1;Parent=gene-CYJ02_RS02435;Dbxref=GenBank:WP_015729283.1;Name=WP_015729283.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729283.1;locus_tag=CYJ02_RS02435;product=glutamyl-tRNA reductase;protein_id=WP_015729283.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 107533 108204 . + . ID=gene-CYJ02_RS02440;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02440;old_locus_tag=CYJ02_02440 NZ_PJUQ01000003.1 Protein Homology CDS 107533 108204 . + 0 ID=cds-WP_224397735.1;Parent=gene-CYJ02_RS02440;Dbxref=GenBank:WP_224397735.1;Name=WP_224397735.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.7;locus_tag=CYJ02_RS02440;product=cytochrome c biogenesis protein CcsA;protein_id=WP_224397735.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 108230 109159 . + . ID=gene-CYJ02_RS02445;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CYJ02_RS02445;old_locus_tag=CYJ02_02445 NZ_PJUQ01000003.1 Protein Homology CDS 108230 109159 . + 0 ID=cds-WP_037542832.1;Parent=gene-CYJ02_RS02445;Dbxref=GenBank:WP_037542832.1;Name=WP_037542832.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729281.1;locus_tag=CYJ02_RS02445;product=hydroxymethylbilane synthase;protein_id=WP_037542832.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 109163 109840 . + . ID=gene-CYJ02_RS02450;Name=CYJ02_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02450;old_locus_tag=CYJ02_02450 NZ_PJUQ01000003.1 Protein Homology CDS 109163 109840 . + 0 ID=cds-WP_101431354.1;Parent=gene-CYJ02_RS02450;Dbxref=GenBank:WP_101431354.1;Name=WP_101431354.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=CYJ02_RS02450;product=uroporphyrinogen-III synthase;protein_id=WP_101431354.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 109840 110817 . + . ID=gene-CYJ02_RS02455;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CYJ02_RS02455;old_locus_tag=CYJ02_02455 NZ_PJUQ01000003.1 Protein Homology CDS 109840 110817 . + 0 ID=cds-WP_014613705.1;Parent=gene-CYJ02_RS02455;Dbxref=GenBank:WP_014613705.1;Name=WP_014613705.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=CYJ02_RS02455;product=porphobilinogen synthase;protein_id=WP_014613705.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 110833 112119 . + . ID=gene-CYJ02_RS02460;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CYJ02_RS02460;old_locus_tag=CYJ02_02460 NZ_PJUQ01000003.1 Protein Homology CDS 110833 112119 . + 0 ID=cds-WP_014613706.1;Parent=gene-CYJ02_RS02460;Dbxref=GenBank:WP_014613706.1;Name=WP_014613706.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638191.1;locus_tag=CYJ02_RS02460;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014613706.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 112377 113459 . + . ID=gene-CYJ02_RS02465;Name=CYJ02_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02465;old_locus_tag=CYJ02_02465 NZ_PJUQ01000003.1 Protein Homology CDS 112377 113459 . + 0 ID=cds-WP_020219738.1;Parent=gene-CYJ02_RS02465;Dbxref=GenBank:WP_020219738.1;Name=WP_020219738.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219738.1;locus_tag=CYJ02_RS02465;product=AbrB family transcriptional regulator;protein_id=WP_020219738.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 113544 114092 . - . ID=gene-CYJ02_RS02470;Name=CYJ02_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02470;old_locus_tag=CYJ02_02470 NZ_PJUQ01000003.1 Protein Homology CDS 113544 114092 . - 0 ID=cds-WP_063278924.1;Parent=gene-CYJ02_RS02470;Dbxref=GenBank:WP_063278924.1;Name=WP_063278924.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=CYJ02_RS02470;product=DNA-3-methyladenine glycosylase I;protein_id=WP_063278924.1;transl_table=11 NZ_PJUQ01000003.1 cmsearch binding_site 114151 114373 . + . ID=id-NZ_PJUQ01000003.1:114151..114373;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000003.1 RefSeq gene 114412 117042 . + . ID=gene-CYJ02_RS02475;Name=CYJ02_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02475;old_locus_tag=CYJ02_02475 NZ_PJUQ01000003.1 Protein Homology CDS 114412 117042 . + 0 ID=cds-WP_101431340.1;Parent=gene-CYJ02_RS02475;Dbxref=GenBank:WP_101431340.1;Name=WP_101431340.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=CYJ02_RS02475;product=valine--tRNA ligase;protein_id=WP_101431340.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 117054 118322 . + . ID=gene-CYJ02_RS02480;Name=CYJ02_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02480;old_locus_tag=CYJ02_02480 NZ_PJUQ01000003.1 Protein Homology CDS 117054 118322 . + 0 ID=cds-WP_014613710.1;Parent=gene-CYJ02_RS02480;Dbxref=GenBank:WP_014613710.1;Name=WP_014613710.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169487.1;locus_tag=CYJ02_RS02480;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_014613710.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 118510 119235 . + . ID=gene-CYJ02_RS02485;Name=CYJ02_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02485;old_locus_tag=CYJ02_02485 NZ_PJUQ01000003.1 Protein Homology CDS 118510 119235 . + 0 ID=cds-WP_242442428.1;Parent=gene-CYJ02_RS02485;Dbxref=GenBank:WP_242442428.1;Name=WP_242442428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=CYJ02_RS02485;product=prepilin peptidase;protein_id=WP_242442428.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 119232 119915 . + . ID=gene-CYJ02_RS02490;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CYJ02_RS02490;old_locus_tag=CYJ02_02490 NZ_PJUQ01000003.1 Protein Homology CDS 119232 119915 . + 0 ID=cds-WP_063278921.1;Parent=gene-CYJ02_RS02490;Dbxref=GenBank:WP_063278921.1;Name=WP_063278921.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=CYJ02_RS02490;product=RadC family protein;protein_id=WP_063278921.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 119905 120162 . + . ID=gene-CYJ02_RS02495;Name=CYJ02_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02495;old_locus_tag=CYJ02_02495 NZ_PJUQ01000003.1 GeneMarkS-2+ CDS 119905 120162 . + 0 ID=cds-WP_063278920.1;Parent=gene-CYJ02_RS02495;Dbxref=GenBank:WP_063278920.1;Name=WP_063278920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS02495;product=hypothetical protein;protein_id=WP_063278920.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 120153 120308 . - . ID=gene-CYJ02_RS12490;Name=CYJ02_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12490 NZ_PJUQ01000003.1 Protein Homology CDS 120153 120308 . - 0 ID=cds-WP_015729275.1;Parent=gene-CYJ02_RS12490;Dbxref=GenBank:WP_015729275.1;Name=WP_015729275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729275.1;locus_tag=CYJ02_RS12490;product=hypothetical protein;protein_id=WP_015729275.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 120478 120954 . + . ID=gene-CYJ02_RS02500;Name=CYJ02_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02500;old_locus_tag=CYJ02_02500 NZ_PJUQ01000003.1 Protein Homology CDS 120478 120954 . + 0 ID=cds-WP_020219739.1;Parent=gene-CYJ02_RS02500;Dbxref=GenBank:WP_020219739.1;Name=WP_020219739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=CYJ02_RS02500;product=DUF4930 family protein;protein_id=WP_020219739.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 121040 121180 . + . ID=gene-CYJ02_RS12495;Name=CYJ02_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12495 NZ_PJUQ01000003.1 Protein Homology CDS 121040 121180 . + 0 ID=cds-WP_015729273.1;Parent=gene-CYJ02_RS12495;Dbxref=GenBank:WP_015729273.1;Name=WP_015729273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729273.1;locus_tag=CYJ02_RS12495;product=hypothetical protein;protein_id=WP_015729273.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 121391 122227 . + . ID=gene-CYJ02_RS02505;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CYJ02_RS02505;old_locus_tag=CYJ02_02505 NZ_PJUQ01000003.1 Protein Homology CDS 121391 122227 . + 0 ID=cds-WP_015729272.1;Parent=gene-CYJ02_RS02505;Dbxref=GenBank:WP_015729272.1;Name=WP_015729272.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=CYJ02_RS02505;product=rod shape-determining protein MreC;protein_id=WP_015729272.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 122227 122742 . + . ID=gene-CYJ02_RS02510;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02510;old_locus_tag=CYJ02_02510 NZ_PJUQ01000003.1 Protein Homology CDS 122227 122742 . + 0 ID=cds-WP_015729271.1;Parent=gene-CYJ02_RS02510;Dbxref=GenBank:WP_015729271.1;Name=WP_015729271.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729271.1;locus_tag=CYJ02_RS02510;product=rod shape-determining protein MreD;protein_id=WP_015729271.1;transl_table=11 NZ_PJUQ01000003.1 cmsearch sequence_feature 122778 122851 . + . ID=id-NZ_PJUQ01000003.1:122778..122851;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000003.1 RefSeq gene 122863 123171 . + . ID=gene-CYJ02_RS02515;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CYJ02_RS02515;old_locus_tag=CYJ02_02515 NZ_PJUQ01000003.1 Protein Homology CDS 122863 123171 . + 0 ID=cds-WP_014613714.1;Parent=gene-CYJ02_RS02515;Dbxref=GenBank:WP_014613714.1;Name=WP_014613714.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CYJ02_RS02515;product=50S ribosomal protein L21;protein_id=WP_014613714.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 123174 123494 . + . ID=gene-CYJ02_RS02520;Name=CYJ02_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02520;old_locus_tag=CYJ02_02520 NZ_PJUQ01000003.1 Protein Homology CDS 123174 123494 . + 0 ID=cds-WP_014613715.1;Parent=gene-CYJ02_RS02520;Dbxref=GenBank:WP_014613715.1;Name=WP_014613715.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CYJ02_RS02520;product=ribosomal-processing cysteine protease Prp;protein_id=WP_014613715.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 123505 123789 . + . ID=gene-CYJ02_RS02525;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02525;old_locus_tag=CYJ02_02525 NZ_PJUQ01000003.1 Protein Homology CDS 123505 123789 . + 0 ID=cds-WP_014613716.1;Parent=gene-CYJ02_RS02525;Dbxref=GenBank:WP_014613716.1;Name=WP_014613716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CYJ02_RS02525;product=50S ribosomal protein L27;protein_id=WP_014613716.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 123918 125210 . + . ID=gene-CYJ02_RS02530;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CYJ02_RS02530;old_locus_tag=CYJ02_02530 NZ_PJUQ01000003.1 Protein Homology CDS 123918 125210 . + 0 ID=cds-WP_037542834.1;Parent=gene-CYJ02_RS02530;Dbxref=GenBank:WP_037542834.1;Name=WP_037542834.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CYJ02_RS02530;product=GTPase ObgE;protein_id=WP_037542834.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 125238 125681 . + . ID=gene-CYJ02_RS02535;Name=CYJ02_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02535;old_locus_tag=CYJ02_02535 NZ_PJUQ01000003.1 Protein Homology CDS 125238 125681 . + 0 ID=cds-WP_014613718.1;Parent=gene-CYJ02_RS02535;Dbxref=GenBank:WP_014613718.1;Name=WP_014613718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=CYJ02_RS02535;product=ACT domain-containing protein;protein_id=WP_014613718.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 125695 126294 . + . ID=gene-CYJ02_RS02540;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02540;old_locus_tag=CYJ02_02540 NZ_PJUQ01000003.1 Protein Homology CDS 125695 126294 . + 0 ID=cds-WP_015729270.1;Parent=gene-CYJ02_RS02540;Dbxref=GenBank:WP_015729270.1;Name=WP_015729270.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=CYJ02_RS02540;product=Holliday junction branch migration protein RuvA;protein_id=WP_015729270.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 126308 127306 . + . ID=gene-CYJ02_RS02545;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CYJ02_RS02545;old_locus_tag=CYJ02_02545 NZ_PJUQ01000003.1 Protein Homology CDS 126308 127306 . + 0 ID=cds-WP_014613720.1;Parent=gene-CYJ02_RS02545;Dbxref=GenBank:WP_014613720.1;Name=WP_014613720.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=CYJ02_RS02545;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_014613720.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 127324 128349 . + . ID=gene-CYJ02_RS02550;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02550;old_locus_tag=CYJ02_02550 NZ_PJUQ01000003.1 Protein Homology CDS 127324 128349 . + 0 ID=cds-WP_037542836.1;Parent=gene-CYJ02_RS02550;Dbxref=GenBank:WP_037542836.1;Name=WP_037542836.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CYJ02_RS02550;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037542836.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 128367 129506 . + . ID=gene-CYJ02_RS02555;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CYJ02_RS02555;old_locus_tag=CYJ02_02555 NZ_PJUQ01000003.1 Protein Homology CDS 128367 129506 . + 0 ID=cds-WP_014613722.1;Parent=gene-CYJ02_RS02555;Dbxref=GenBank:WP_014613722.1;Name=WP_014613722.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CYJ02_RS02555;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_014613722.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 129523 129786 . + . ID=gene-CYJ02_RS02560;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CYJ02_RS02560;old_locus_tag=CYJ02_02560 NZ_PJUQ01000003.1 Protein Homology CDS 129523 129786 . + 0 ID=cds-WP_014613723.1;Parent=gene-CYJ02_RS02560;Dbxref=GenBank:WP_014613723.1;Name=WP_014613723.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=CYJ02_RS02560;product=preprotein translocase subunit YajC;protein_id=WP_014613723.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 129928 132207 . + . ID=gene-CYJ02_RS02565;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=CYJ02_RS02565;old_locus_tag=CYJ02_02565 NZ_PJUQ01000003.1 Protein Homology CDS 129928 132207 . + 0 ID=cds-WP_014613724.1;Parent=gene-CYJ02_RS02565;Dbxref=GenBank:WP_014613724.1;Name=WP_014613724.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491144.1;locus_tag=CYJ02_RS02565;product=protein translocase subunit SecDF;protein_id=WP_014613724.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 132324 134609 . + . ID=gene-CYJ02_RS02570;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS02570;old_locus_tag=CYJ02_02570 NZ_PJUQ01000003.1 Protein Homology CDS 132324 134609 . + 0 ID=cds-WP_037544195.1;Parent=gene-CYJ02_RS02570;Dbxref=GenBank:WP_037544195.1;Name=WP_037544195.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=CYJ02_RS02570;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_037544195.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 134621 135139 . + . ID=gene-CYJ02_RS02575;Name=CYJ02_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02575;old_locus_tag=CYJ02_02575 NZ_PJUQ01000003.1 Protein Homology CDS 134621 135139 . + 0 ID=cds-WP_014613726.1;Parent=gene-CYJ02_RS02575;Dbxref=GenBank:WP_014613726.1;Name=WP_014613726.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CYJ02_RS02575;product=adenine phosphoribosyltransferase;protein_id=WP_014613726.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 135496 137685 . + . ID=gene-CYJ02_RS02580;Name=CYJ02_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02580;old_locus_tag=CYJ02_02580 NZ_PJUQ01000003.1 Protein Homology CDS 135496 137685 . + 0 ID=cds-WP_014613727.1;Parent=gene-CYJ02_RS02580;Dbxref=GenBank:WP_014613727.1;Name=WP_014613727.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=CYJ02_RS02580;product=RelA/SpoT family protein;protein_id=WP_014613727.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 137698 138150 . + . ID=gene-CYJ02_RS02585;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CYJ02_RS02585;old_locus_tag=CYJ02_02585 NZ_PJUQ01000003.1 Protein Homology CDS 137698 138150 . + 0 ID=cds-WP_014613728.1;Parent=gene-CYJ02_RS02585;Dbxref=GenBank:WP_014613728.1;Name=WP_014613728.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302954.1;locus_tag=CYJ02_RS02585;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014613728.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 138147 139022 . + . ID=gene-CYJ02_RS02590;Name=CYJ02_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02590;old_locus_tag=CYJ02_02590 NZ_PJUQ01000003.1 Protein Homology CDS 138147 139022 . + 0 ID=cds-WP_014613729.1;Parent=gene-CYJ02_RS02590;Dbxref=GenBank:WP_014613729.1;Name=WP_014613729.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=CYJ02_RS02590;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_014613729.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 139384 140655 . + . ID=gene-CYJ02_RS02595;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02595;old_locus_tag=CYJ02_02595 NZ_PJUQ01000003.1 Protein Homology CDS 139384 140655 . + 0 ID=cds-WP_101431341.1;Parent=gene-CYJ02_RS02595;Dbxref=GenBank:WP_101431341.1;Name=WP_101431341.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=CYJ02_RS02595;product=histidine--tRNA ligase;protein_id=WP_101431341.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 140655 142421 . + . ID=gene-CYJ02_RS02600;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02600;old_locus_tag=CYJ02_02600 NZ_PJUQ01000003.1 Protein Homology CDS 140655 142421 . + 0 ID=cds-WP_014613731.1;Parent=gene-CYJ02_RS02600;Dbxref=GenBank:WP_014613731.1;Name=WP_014613731.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=CYJ02_RS02600;product=aspartate--tRNA ligase;protein_id=WP_014613731.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 142492 142684 . + . ID=gene-CYJ02_RS02605;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CYJ02_RS02605;old_locus_tag=CYJ02_02605 NZ_PJUQ01000003.1 cmsearch ncRNA 142492 142684 . + . ID=rna-CYJ02_RS02605;Parent=gene-CYJ02_RS02605;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS02605;product=6S RNA NZ_PJUQ01000003.1 cmsearch exon 142492 142684 . + . ID=exon-CYJ02_RS02605-1;Parent=rna-CYJ02_RS02605;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS02605;product=6S RNA NZ_PJUQ01000003.1 RefSeq gene 142767 143534 . + . ID=gene-CYJ02_RS02610;Name=CYJ02_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02610;old_locus_tag=CYJ02_02610 NZ_PJUQ01000003.1 Protein Homology CDS 142767 143534 . + 0 ID=cds-WP_014613732.1;Parent=gene-CYJ02_RS02610;Dbxref=GenBank:WP_014613732.1;Name=WP_014613732.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=CYJ02_RS02610;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_014613732.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 143602 144873 . - . ID=gene-CYJ02_RS02615;Name=CYJ02_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02615;old_locus_tag=CYJ02_02615 NZ_PJUQ01000003.1 Protein Homology CDS 143602 144873 . - 0 ID=cds-WP_101431342.1;Parent=gene-CYJ02_RS02615;Dbxref=GenBank:WP_101431342.1;Name=WP_101431342.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165155.1;locus_tag=CYJ02_RS02615;product=replication-associated recombination protein A;protein_id=WP_101431342.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 144983 145402 . + . ID=gene-CYJ02_RS02620;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=CYJ02_RS02620;old_locus_tag=CYJ02_02620 NZ_PJUQ01000003.1 Protein Homology CDS 144983 145402 . + 0 ID=cds-WP_014613734.1;Parent=gene-CYJ02_RS02620;Dbxref=GenBank:WP_014613734.1;Name=WP_014613734.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CYJ02_RS02620;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_014613734.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 145443 146273 . + . ID=gene-CYJ02_RS02625;Name=CYJ02_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02625;old_locus_tag=CYJ02_02625 NZ_PJUQ01000003.1 Protein Homology CDS 145443 146273 . + 0 ID=cds-WP_020219746.1;Parent=gene-CYJ02_RS02625;Dbxref=GenBank:WP_020219746.1;Name=WP_020219746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=CYJ02_RS02625;product=aldo/keto reductase;protein_id=WP_020219746.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 146341 146526 . + . ID=gene-CYJ02_RS02630;Name=CYJ02_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02630;old_locus_tag=CYJ02_02630 NZ_PJUQ01000003.1 Protein Homology CDS 146341 146526 . + 0 ID=cds-WP_014613736.1;Parent=gene-CYJ02_RS02630;Dbxref=GenBank:WP_014613736.1;Name=WP_014613736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613736.1;locus_tag=CYJ02_RS02630;product=CsbD family protein;protein_id=WP_014613736.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 146990 148006 . - . ID=gene-CYJ02_RS02635;Name=CYJ02_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02635;old_locus_tag=CYJ02_02635 NZ_PJUQ01000003.1 Protein Homology CDS 146990 148006 . - 0 ID=cds-WP_101431343.1;Parent=gene-CYJ02_RS02635;Dbxref=GenBank:WP_101431343.1;Name=WP_101431343.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219747.1;locus_tag=CYJ02_RS02635;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_101431343.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 148215 149360 . + . ID=gene-CYJ02_RS02640;Name=CYJ02_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02640;old_locus_tag=CYJ02_02640 NZ_PJUQ01000003.1 Protein Homology CDS 148215 149360 . + 0 ID=cds-WP_014613738.1;Parent=gene-CYJ02_RS02640;Dbxref=GenBank:WP_014613738.1;Name=WP_014613738.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613738.1;locus_tag=CYJ02_RS02640;product=cysteine desulfurase family protein;protein_id=WP_014613738.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 149360 150472 . + . ID=gene-CYJ02_RS02645;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02645;old_locus_tag=CYJ02_02645 NZ_PJUQ01000003.1 Protein Homology CDS 149360 150472 . + 0 ID=cds-WP_101431344.1;Parent=gene-CYJ02_RS02645;Dbxref=GenBank:WP_101431344.1;Name=WP_101431344.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469417.1;locus_tag=CYJ02_RS02645;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_101431344.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 150488 151162 . + . ID=gene-CYJ02_RS02650;Name=CYJ02_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02650;old_locus_tag=CYJ02_02650 NZ_PJUQ01000003.1 Protein Homology CDS 150488 151162 . + 0 ID=cds-WP_101431345.1;Parent=gene-CYJ02_RS02650;Dbxref=GenBank:WP_101431345.1;Name=WP_101431345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=CYJ02_RS02650;product=tetratricopeptide repeat protein;protein_id=WP_101431345.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 151165 153564 . + . ID=gene-CYJ02_RS02655;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=CYJ02_RS02655;old_locus_tag=CYJ02_02655 NZ_PJUQ01000003.1 Protein Homology CDS 151165 153564 . + 0 ID=cds-WP_101431346.1;Parent=gene-CYJ02_RS02655;Dbxref=GenBank:WP_101431346.1;Name=WP_101431346.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169706.1;locus_tag=CYJ02_RS02655;product=SF1B family DNA helicase RecD2;protein_id=WP_101431346.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 153810 156440 . + . ID=gene-CYJ02_RS02660;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02660;old_locus_tag=CYJ02_02660 NZ_PJUQ01000003.1 Protein Homology CDS 153810 156440 . + 0 ID=cds-WP_015729263.1;Parent=gene-CYJ02_RS02660;Dbxref=GenBank:WP_015729263.1;Name=WP_015729263.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512470.1;locus_tag=CYJ02_RS02660;product=alanine--tRNA ligase;protein_id=WP_015729263.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 156503 156775 . + . ID=gene-CYJ02_RS02665;Name=CYJ02_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02665;old_locus_tag=CYJ02_02665 NZ_PJUQ01000003.1 Protein Homology CDS 156503 156775 . + 0 ID=cds-WP_014613743.1;Parent=gene-CYJ02_RS02665;Dbxref=GenBank:WP_014613743.1;Name=WP_014613743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=CYJ02_RS02665;product=IreB family regulatory phosphoprotein;protein_id=WP_014613743.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 156768 157196 . + . ID=gene-CYJ02_RS02670;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CYJ02_RS02670;old_locus_tag=CYJ02_02670 NZ_PJUQ01000003.1 Protein Homology CDS 156768 157196 . + 0 ID=cds-WP_014613744.1;Parent=gene-CYJ02_RS02670;Dbxref=GenBank:WP_014613744.1;Name=WP_014613744.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=CYJ02_RS02670;product=Holliday junction resolvase RuvX;protein_id=WP_014613744.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 157210 157530 . + . ID=gene-CYJ02_RS02675;Name=CYJ02_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02675;old_locus_tag=CYJ02_02675 NZ_PJUQ01000003.1 Protein Homology CDS 157210 157530 . + 0 ID=cds-WP_101431347.1;Parent=gene-CYJ02_RS02675;Dbxref=GenBank:WP_101431347.1;Name=WP_101431347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=CYJ02_RS02675;product=DUF1292 domain-containing protein;protein_id=WP_101431347.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 157927 158571 . + . ID=gene-CYJ02_RS02680;Name=CYJ02_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02680;old_locus_tag=CYJ02_02680 NZ_PJUQ01000003.1 Protein Homology CDS 157927 158571 . + 0 ID=cds-WP_014613747.1;Parent=gene-CYJ02_RS02680;Dbxref=GenBank:WP_014613747.1;Name=WP_014613747.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=CYJ02_RS02680;product=O-methyltransferase;protein_id=WP_014613747.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 158564 159493 . + . ID=gene-CYJ02_RS02685;Name=CYJ02_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02685;old_locus_tag=CYJ02_02685 NZ_PJUQ01000003.1 Protein Homology CDS 158564 159493 . + 0 ID=cds-WP_014613748.1;Parent=gene-CYJ02_RS02685;Dbxref=GenBank:WP_014613748.1;Name=WP_014613748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CYJ02_RS02685;product=peptidase U32 family protein;protein_id=WP_014613748.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 159512 160777 . + . ID=gene-CYJ02_RS02690;Name=CYJ02_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02690;old_locus_tag=CYJ02_02690 NZ_PJUQ01000003.1 Protein Homology CDS 159512 160777 . + 0 ID=cds-WP_014613749.1;Parent=gene-CYJ02_RS02690;Dbxref=GenBank:WP_014613749.1;Name=WP_014613749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169713.1;locus_tag=CYJ02_RS02690;product=peptidase U32 family protein;protein_id=WP_014613749.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 160781 161404 . + . ID=gene-CYJ02_RS02695;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CYJ02_RS02695;old_locus_tag=CYJ02_02695 NZ_PJUQ01000003.1 Protein Homology CDS 160781 161404 . + 0 ID=cds-WP_014613750.1;Parent=gene-CYJ02_RS02695;Dbxref=GenBank:WP_014613750.1;Name=WP_014613750.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613750.1;locus_tag=CYJ02_RS02695;product=uridine kinase;protein_id=WP_014613750.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 161431 161907 . + . ID=gene-CYJ02_RS02700;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02700;old_locus_tag=CYJ02_02700 NZ_PJUQ01000003.1 Protein Homology CDS 161431 161907 . + 0 ID=cds-WP_014613751.1;Parent=gene-CYJ02_RS02700;Dbxref=GenBank:WP_014613751.1;Name=WP_014613751.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169715.1;locus_tag=CYJ02_RS02700;product=transcription elongation factor GreA;protein_id=WP_014613751.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 162163 162897 . + . ID=gene-CYJ02_RS02705;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS02705;old_locus_tag=CYJ02_02705 NZ_PJUQ01000003.1 Protein Homology CDS 162163 162897 . + 0 ID=cds-WP_100006540.1;Parent=gene-CYJ02_RS02705;Dbxref=GenBank:WP_100006540.1;Name=WP_100006540.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=CYJ02_RS02705;product=5-oxoprolinase subunit PxpB;protein_id=WP_100006540.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 162887 163912 . + . ID=gene-CYJ02_RS02710;Name=CYJ02_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02710;old_locus_tag=CYJ02_02710 NZ_PJUQ01000003.1 Protein Homology CDS 162887 163912 . + 0 ID=cds-WP_037542841.1;Parent=gene-CYJ02_RS02710;Dbxref=GenBank:WP_037542841.1;Name=WP_037542841.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=CYJ02_RS02710;product=5-oxoprolinase subunit C family protein;protein_id=WP_037542841.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 163903 164349 . + . ID=gene-CYJ02_RS02715;Name=CYJ02_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02715;old_locus_tag=CYJ02_02715 NZ_PJUQ01000003.1 Protein Homology CDS 163903 164349 . + 0 ID=cds-WP_037542842.1;Parent=gene-CYJ02_RS02715;Dbxref=GenBank:WP_037542842.1;Name=WP_037542842.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613754.1;locus_tag=CYJ02_RS02715;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542842.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 164363 165733 . + . ID=gene-CYJ02_RS02720;Name=CYJ02_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02720;old_locus_tag=CYJ02_02720 NZ_PJUQ01000003.1 Protein Homology CDS 164363 165733 . + 0 ID=cds-WP_014613755.1;Parent=gene-CYJ02_RS02720;Dbxref=GenBank:WP_014613755.1;Name=WP_014613755.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=CYJ02_RS02720;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_014613755.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 165723 166481 . + . ID=gene-CYJ02_RS02725;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02725;old_locus_tag=CYJ02_02725 NZ_PJUQ01000003.1 Protein Homology CDS 165723 166481 . + 0 ID=cds-WP_014613756.1;Parent=gene-CYJ02_RS02725;Dbxref=GenBank:WP_014613756.1;Name=WP_014613756.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165174.1;locus_tag=CYJ02_RS02725;product=5-oxoprolinase subunit PxpA;protein_id=WP_014613756.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 166485 167723 . + . ID=gene-CYJ02_RS02730;Name=CYJ02_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02730;old_locus_tag=CYJ02_02730 NZ_PJUQ01000003.1 Protein Homology CDS 166485 167723 . + 0 ID=cds-WP_014613757.1;Parent=gene-CYJ02_RS02730;Dbxref=GenBank:WP_014613757.1;Name=WP_014613757.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169721.1;locus_tag=CYJ02_RS02730;product=NRAMP family divalent metal transporter;protein_id=WP_014613757.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 167973 168659 . + . ID=gene-CYJ02_RS02735;Name=CYJ02_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02735;old_locus_tag=CYJ02_02735 NZ_PJUQ01000003.1 Protein Homology CDS 167973 168659 . + 0 ID=cds-WP_101431348.1;Parent=gene-CYJ02_RS02735;Dbxref=GenBank:WP_101431348.1;Name=WP_101431348.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302980.1;locus_tag=CYJ02_RS02735;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_101431348.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 168732 169259 . + . ID=gene-CYJ02_RS02740;Name=CYJ02_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02740;old_locus_tag=CYJ02_02740 NZ_PJUQ01000003.1 Protein Homology CDS 168732 169259 . + 0 ID=cds-WP_014613759.1;Parent=gene-CYJ02_RS02740;Dbxref=GenBank:WP_014613759.1;Name=WP_014613759.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=CYJ02_RS02740;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_014613759.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 169260 170360 . + . ID=gene-CYJ02_RS02745;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=CYJ02_RS02745;old_locus_tag=CYJ02_02745 NZ_PJUQ01000003.1 Protein Homology CDS 169260 170360 . + 0 ID=cds-WP_014613760.1;Parent=gene-CYJ02_RS02745;Dbxref=GenBank:WP_014613760.1;Name=WP_014613760.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=CYJ02_RS02745;product=ribosome biogenesis GTPase YqeH;protein_id=WP_014613760.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 170376 171188 . + . ID=gene-CYJ02_RS02750;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CYJ02_RS02750;old_locus_tag=CYJ02_02750 NZ_PJUQ01000003.1 Protein Homology CDS 170376 171188 . + 0 ID=cds-WP_015729259.1;Parent=gene-CYJ02_RS02750;Dbxref=GenBank:WP_015729259.1;Name=WP_015729259.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219754.1;locus_tag=CYJ02_RS02750;product=shikimate dehydrogenase;protein_id=WP_015729259.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 171199 171492 . + . ID=gene-CYJ02_RS02755;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CYJ02_RS02755;old_locus_tag=CYJ02_02755 NZ_PJUQ01000003.1 Protein Homology CDS 171199 171492 . + 0 ID=cds-WP_014613762.1;Parent=gene-CYJ02_RS02755;Dbxref=GenBank:WP_014613762.1;Name=WP_014613762.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169726.1;locus_tag=CYJ02_RS02755;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_014613762.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 171495 172076 . + . ID=gene-CYJ02_RS02760;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02760;old_locus_tag=CYJ02_02760 NZ_PJUQ01000003.1 Protein Homology CDS 171495 172076 . + 0 ID=cds-WP_014613763.1;Parent=gene-CYJ02_RS02760;Dbxref=GenBank:WP_014613763.1;Name=WP_014613763.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=CYJ02_RS02760;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_014613763.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 172054 172638 . + . ID=gene-CYJ02_RS02765;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=CYJ02_RS02765;old_locus_tag=CYJ02_02765 NZ_PJUQ01000003.1 Protein Homology CDS 172054 172638 . + 0 ID=cds-WP_014613764.1;Parent=gene-CYJ02_RS02765;Dbxref=GenBank:WP_014613764.1;Name=WP_014613764.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613764.1;locus_tag=CYJ02_RS02765;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_014613764.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 172639 172995 . + . ID=gene-CYJ02_RS02770;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CYJ02_RS02770;old_locus_tag=CYJ02_02770 NZ_PJUQ01000003.1 Protein Homology CDS 172639 172995 . + 0 ID=cds-WP_014613765.1;Parent=gene-CYJ02_RS02770;Dbxref=GenBank:WP_014613765.1;Name=WP_014613765.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=CYJ02_RS02770;product=ribosome silencing factor;protein_id=WP_014613765.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 172995 173717 . + . ID=gene-CYJ02_RS02775;Name=CYJ02_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02775;old_locus_tag=CYJ02_02775 NZ_PJUQ01000003.1 Protein Homology CDS 172995 173717 . + 0 ID=cds-WP_101431349.1;Parent=gene-CYJ02_RS02775;Dbxref=GenBank:WP_101431349.1;Name=WP_101431349.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=CYJ02_RS02775;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_101431349.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 173771 174439 . + . ID=gene-CYJ02_RS02780;Name=CYJ02_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02780;old_locus_tag=CYJ02_02780 NZ_PJUQ01000003.1 Protein Homology CDS 173771 174439 . + 0 ID=cds-WP_014613767.1;Parent=gene-CYJ02_RS02780;Dbxref=GenBank:WP_014613767.1;Name=WP_014613767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613767.1;locus_tag=CYJ02_RS02780;product=helix-hairpin-helix domain-containing protein;protein_id=WP_014613767.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 174525 174986 . + . ID=gene-CYJ02_RS02785;Name=CYJ02_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02785;old_locus_tag=CYJ02_02785 NZ_PJUQ01000003.1 Protein Homology CDS 174525 174986 . + 0 ID=cds-WP_015729257.1;Parent=gene-CYJ02_RS02785;Dbxref=GenBank:WP_015729257.1;Name=WP_015729257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729257.1;locus_tag=CYJ02_RS02785;product=ComE operon protein 2;protein_id=WP_015729257.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 174986 177214 . + . ID=gene-CYJ02_RS02790;Name=CYJ02_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02790;old_locus_tag=CYJ02_02790 NZ_PJUQ01000003.1 Protein Homology CDS 174986 177214 . + 0 ID=cds-WP_063278914.1;Parent=gene-CYJ02_RS02790;Dbxref=GenBank:WP_063278914.1;Name=WP_063278914.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219756.1;locus_tag=CYJ02_RS02790;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_063278914.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 177282 178256 . + . ID=gene-CYJ02_RS02795;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02795;old_locus_tag=CYJ02_02795 NZ_PJUQ01000003.1 Protein Homology CDS 177282 178256 . + 0 ID=cds-WP_015729255.1;Parent=gene-CYJ02_RS02795;Dbxref=GenBank:WP_015729255.1;Name=WP_015729255.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729255.1;locus_tag=CYJ02_RS02795;product=DNA polymerase III subunit delta;protein_id=WP_015729255.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 178430 178678 . - . ID=gene-CYJ02_RS02800;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CYJ02_RS02800;old_locus_tag=CYJ02_02800 NZ_PJUQ01000003.1 Protein Homology CDS 178430 178678 . - 0 ID=cds-WP_014613771.1;Parent=gene-CYJ02_RS02800;Dbxref=GenBank:WP_014613771.1;Name=WP_014613771.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=CYJ02_RS02800;product=30S ribosomal protein S20;protein_id=WP_014613771.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 179001 180824 . + . ID=gene-CYJ02_RS02805;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02805;old_locus_tag=CYJ02_02805 NZ_PJUQ01000003.1 Protein Homology CDS 179001 180824 . + 0 ID=cds-WP_014613772.1;Parent=gene-CYJ02_RS02805;Dbxref=GenBank:WP_014613772.1;Name=WP_014613772.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=CYJ02_RS02805;product=translation elongation factor 4;protein_id=WP_014613772.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 180892 182013 . + . ID=gene-CYJ02_RS02810;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CYJ02_RS02810;old_locus_tag=CYJ02_02810 NZ_PJUQ01000003.1 Protein Homology CDS 180892 182013 . + 0 ID=cds-WP_096533274.1;Parent=gene-CYJ02_RS02810;Dbxref=GenBank:WP_096533274.1;Name=WP_096533274.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=CYJ02_RS02810;product=radical SAM family heme chaperone HemW;protein_id=WP_096533274.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 182116 183105 . + . ID=gene-CYJ02_RS02815;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02815;old_locus_tag=CYJ02_02815 NZ_PJUQ01000003.1 Protein Homology CDS 182116 183105 . + 0 ID=cds-WP_037542851.1;Parent=gene-CYJ02_RS02815;Dbxref=GenBank:WP_037542851.1;Name=WP_037542851.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=CYJ02_RS02815;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_037542851.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 183120 183761 . + . ID=gene-CYJ02_RS02820;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CYJ02_RS02820;old_locus_tag=CYJ02_02820 NZ_PJUQ01000003.1 Protein Homology CDS 183120 183761 . + 0 ID=cds-WP_015729253.1;Parent=gene-CYJ02_RS02820;Dbxref=GenBank:WP_015729253.1;Name=WP_015729253.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613775.1;locus_tag=CYJ02_RS02820;product=nucleotide exchange factor GrpE;protein_id=WP_015729253.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 183825 185657 . + . ID=gene-CYJ02_RS02825;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CYJ02_RS02825;old_locus_tag=CYJ02_02825 NZ_PJUQ01000003.1 Protein Homology CDS 183825 185657 . + 0 ID=cds-WP_014613776.1;Parent=gene-CYJ02_RS02825;Dbxref=GenBank:WP_014613776.1;Name=WP_014613776.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729252.1;locus_tag=CYJ02_RS02825;product=molecular chaperone DnaK;protein_id=WP_014613776.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 185767 186900 . + . ID=gene-CYJ02_RS02830;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS02830;old_locus_tag=CYJ02_02830 NZ_PJUQ01000003.1 Protein Homology CDS 185767 186900 . + 0 ID=cds-WP_015729251.1;Parent=gene-CYJ02_RS02830;Dbxref=GenBank:WP_015729251.1;Name=WP_015729251.1;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||IEA,heat shock protein binding|0031072||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CYJ02_RS02830;product=molecular chaperone DnaJ;protein_id=WP_015729251.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 186904 187836 . + . ID=gene-CYJ02_RS02835;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02835;old_locus_tag=CYJ02_02835 NZ_PJUQ01000003.1 Protein Homology CDS 186904 187836 . + 0 ID=cds-WP_014613778.1;Parent=gene-CYJ02_RS02835;Dbxref=GenBank:WP_014613778.1;Name=WP_014613778.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613778.1;locus_tag=CYJ02_RS02835;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_014613778.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 187838 188590 . + . ID=gene-CYJ02_RS02840;Name=CYJ02_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02840;old_locus_tag=CYJ02_02840 NZ_PJUQ01000003.1 Protein Homology CDS 187838 188590 . + 0 ID=cds-WP_014613779.1;Parent=gene-CYJ02_RS02840;Dbxref=GenBank:WP_014613779.1;Name=WP_014613779.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=CYJ02_RS02840;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_014613779.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 188595 189944 . + . ID=gene-CYJ02_RS02845;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS02845;old_locus_tag=CYJ02_02845 NZ_PJUQ01000003.1 Protein Homology CDS 188595 189944 . + 0 ID=cds-WP_015729250.1;Parent=gene-CYJ02_RS02845;Dbxref=GenBank:WP_015729250.1;Name=WP_015729250.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729250.1;locus_tag=CYJ02_RS02845;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_015729250.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 190153 190329 . + . ID=gene-CYJ02_RS02850;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CYJ02_RS02850;old_locus_tag=CYJ02_02850 NZ_PJUQ01000003.1 Protein Homology CDS 190153 190329 . + 0 ID=cds-WP_002471046.1;Parent=gene-CYJ02_RS02850;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CYJ02_RS02850;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 190635 191123 . + . ID=gene-CYJ02_RS02855;Name=CYJ02_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02855;old_locus_tag=CYJ02_02855 NZ_PJUQ01000003.1 Protein Homology CDS 190635 191123 . + 0 ID=cds-WP_101431350.1;Parent=gene-CYJ02_RS02855;Dbxref=GenBank:WP_101431350.1;Name=WP_101431350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729249.1;locus_tag=CYJ02_RS02855;product=hypothetical protein;protein_id=WP_101431350.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 191508 192158 . + . ID=gene-CYJ02_RS02860;Name=CYJ02_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02860;old_locus_tag=CYJ02_02860 NZ_PJUQ01000003.1 Protein Homology CDS 191508 192158 . + 0 ID=cds-WP_015729248.1;Parent=gene-CYJ02_RS02860;Dbxref=GenBank:WP_015729248.1;Name=WP_015729248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613782.1;locus_tag=CYJ02_RS02860;product=NfeD family protein;protein_id=WP_015729248.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 192177 193172 . + . ID=gene-CYJ02_RS02865;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02865;old_locus_tag=CYJ02_02865 NZ_PJUQ01000003.1 Protein Homology CDS 192177 193172 . + 0 ID=cds-WP_014613783.1;Parent=gene-CYJ02_RS02865;Dbxref=GenBank:WP_014613783.1;Name=WP_014613783.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613783.1;locus_tag=CYJ02_RS02865;product=flotillin-like protein FloA;protein_id=WP_014613783.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 193186 193800 . + . ID=gene-CYJ02_RS02870;Name=CYJ02_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02870;old_locus_tag=CYJ02_02870 NZ_PJUQ01000003.1 Protein Homology CDS 193186 193800 . + 0 ID=cds-WP_014613784.1;Parent=gene-CYJ02_RS02870;Dbxref=GenBank:WP_014613784.1;Name=WP_014613784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729247.1;locus_tag=CYJ02_RS02870;product=hypothetical protein;protein_id=WP_014613784.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 194151 195095 . + . ID=gene-CYJ02_RS02875;Name=CYJ02_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02875;old_locus_tag=CYJ02_02875 NZ_PJUQ01000003.1 Protein Homology CDS 194151 195095 . + 0 ID=cds-WP_014613785.1;Parent=gene-CYJ02_RS02875;Dbxref=GenBank:WP_014613785.1;Name=WP_014613785.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168656.1;locus_tag=CYJ02_RS02875;product=PhoH family protein;protein_id=WP_014613785.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 195099 195560 . + . ID=gene-CYJ02_RS02880;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CYJ02_RS02880;old_locus_tag=CYJ02_02880 NZ_PJUQ01000003.1 Protein Homology CDS 195099 195560 . + 0 ID=cds-WP_014613786.1;Parent=gene-CYJ02_RS02880;Dbxref=GenBank:WP_014613786.1;Name=WP_014613786.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=CYJ02_RS02880;product=rRNA maturation RNase YbeY;protein_id=WP_014613786.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 195560 195907 . + . ID=gene-CYJ02_RS02885;Name=CYJ02_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02885;old_locus_tag=CYJ02_02885 NZ_PJUQ01000003.1 Protein Homology CDS 195560 195907 . + 0 ID=cds-WP_014613787.1;Parent=gene-CYJ02_RS02885;Dbxref=GenBank:WP_014613787.1;Name=WP_014613787.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165202.1;locus_tag=CYJ02_RS02885;product=diacylglycerol kinase family protein;protein_id=WP_014613787.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 195923 196330 . + . ID=gene-CYJ02_RS02890;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CYJ02_RS02890;old_locus_tag=CYJ02_02890 NZ_PJUQ01000003.1 Protein Homology CDS 195923 196330 . + 0 ID=cds-WP_014613788.1;Parent=gene-CYJ02_RS02890;Dbxref=GenBank:WP_014613788.1;Name=WP_014613788.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165203.1;locus_tag=CYJ02_RS02890;product=cytidine deaminase;protein_id=WP_014613788.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 196327 197223 . + . ID=gene-CYJ02_RS02895;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CYJ02_RS02895;old_locus_tag=CYJ02_02895 NZ_PJUQ01000003.1 Protein Homology CDS 196327 197223 . + 0 ID=cds-WP_014613789.1;Parent=gene-CYJ02_RS02895;Dbxref=GenBank:WP_014613789.1;Name=WP_014613789.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=CYJ02_RS02895;product=GTPase Era;protein_id=WP_014613789.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 197248 198018 . + . ID=gene-CYJ02_RS02900;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CYJ02_RS02900;old_locus_tag=CYJ02_02900 NZ_PJUQ01000003.1 Protein Homology CDS 197248 198018 . + 0 ID=cds-WP_101431351.1;Parent=gene-CYJ02_RS02900;Dbxref=GenBank:WP_101431351.1;Name=WP_101431351.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=CYJ02_RS02900;product=DNA repair protein RecO;protein_id=WP_101431351.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 198234 199628 . - . ID=gene-CYJ02_RS02905;Name=CYJ02_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02905;old_locus_tag=CYJ02_02905 NZ_PJUQ01000003.1 Protein Homology CDS 198234 199628 . - 0 ID=cds-WP_015729245.1;Parent=gene-CYJ02_RS02905;Dbxref=GenBank:WP_015729245.1;Name=WP_015729245.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165206.1;locus_tag=CYJ02_RS02905;product=glycine--tRNA ligase;protein_id=WP_015729245.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 200123 200743 . + . ID=gene-CYJ02_RS02910;Name=CYJ02_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02910;old_locus_tag=CYJ02_02910 NZ_PJUQ01000003.1 Protein Homology CDS 200123 200743 . + 0 ID=cds-WP_075773659.1;Parent=gene-CYJ02_RS02910;Dbxref=GenBank:WP_075773659.1;Name=WP_075773659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724599.1;locus_tag=CYJ02_RS02910;product=helix-turn-helix transcriptional regulator;protein_id=WP_075773659.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 200758 201585 . + . ID=gene-CYJ02_RS02915;Name=CYJ02_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02915;old_locus_tag=CYJ02_02915 NZ_PJUQ01000003.1 Protein Homology CDS 200758 201585 . + 0 ID=cds-WP_014613793.1;Parent=gene-CYJ02_RS02915;Dbxref=GenBank:WP_014613793.1;Name=WP_014613793.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=CYJ02_RS02915;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_014613793.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 201658 203445 . + . ID=gene-CYJ02_RS02920;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CYJ02_RS02920;old_locus_tag=CYJ02_02920 NZ_PJUQ01000003.1 Protein Homology CDS 201658 203445 . + 0 ID=cds-WP_014613794.1;Parent=gene-CYJ02_RS02920;Dbxref=GenBank:WP_014613794.1;Name=WP_014613794.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729243.1;locus_tag=CYJ02_RS02920;product=DNA primase;protein_id=WP_014613794.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 203463 204572 . + . ID=gene-CYJ02_RS02925;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CYJ02_RS02925;old_locus_tag=CYJ02_02925 NZ_PJUQ01000003.1 Protein Homology CDS 203463 204572 . + 0 ID=cds-WP_014613795.1;Parent=gene-CYJ02_RS02925;Dbxref=GenBank:WP_014613795.1;Name=WP_014613795.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CYJ02_RS02925;product=RNA polymerase sigma factor RpoD;protein_id=WP_014613795.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 205090 205767 . + . ID=gene-CYJ02_RS02930;Name=CYJ02_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02930;old_locus_tag=CYJ02_02930 NZ_PJUQ01000003.1 Protein Homology CDS 205090 205767 . + 0 ID=cds-WP_063284402.1;Parent=gene-CYJ02_RS02930;Dbxref=GenBank:WP_063284402.1;Name=WP_063284402.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=CYJ02_RS02930;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_063284402.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 205764 206867 . + . ID=gene-CYJ02_RS02935;Name=CYJ02_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02935;old_locus_tag=CYJ02_02935 NZ_PJUQ01000003.1 Protein Homology CDS 205764 206867 . + 0 ID=cds-WP_037542857.1;Parent=gene-CYJ02_RS02935;Dbxref=GenBank:WP_037542857.1;Name=WP_037542857.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165212.1;locus_tag=CYJ02_RS02935;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_037542857.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 207021 207989 . - . ID=gene-CYJ02_RS02940;Name=CYJ02_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02940;old_locus_tag=CYJ02_02940 NZ_PJUQ01000003.1 Protein Homology CDS 207021 207989 . - 0 ID=cds-WP_014613798.1;Parent=gene-CYJ02_RS02940;Dbxref=GenBank:WP_014613798.1;Name=WP_014613798.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=CYJ02_RS02940;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_014613798.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 208170 209504 . + . ID=gene-CYJ02_RS02945;Name=CYJ02_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02945;old_locus_tag=CYJ02_02945 NZ_PJUQ01000003.1 Protein Homology CDS 208170 209504 . + 0 ID=cds-WP_014613799.1;Parent=gene-CYJ02_RS02945;Dbxref=GenBank:WP_014613799.1;Name=WP_014613799.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165214.1;locus_tag=CYJ02_RS02945;product=DEAD/DEAH box helicase;protein_id=WP_014613799.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 209529 210422 . + . ID=gene-CYJ02_RS02950;Name=CYJ02_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02950;old_locus_tag=CYJ02_02950 NZ_PJUQ01000003.1 Protein Homology CDS 209529 210422 . + 0 ID=cds-WP_015729240.1;Parent=gene-CYJ02_RS02950;Dbxref=GenBank:WP_015729240.1;Name=WP_015729240.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219766.1;locus_tag=CYJ02_RS02950;product=deoxyribonuclease IV;protein_id=WP_015729240.1;transl_table=11 NZ_PJUQ01000003.1 RefSeq gene 210607 210928 . + . ID=gene-CYJ02_RS02955;Name=CYJ02_RS02955;end_range=210928,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02955;old_locus_tag=CYJ02_02955;partial=true NZ_PJUQ01000003.1 Protein Homology CDS 210607 210928 . + 0 ID=cds-WP_133121708.1;Parent=gene-CYJ02_RS02955;Dbxref=GenBank:WP_133121708.1;Name=WP_133121708.1;Ontology_term=GO:0005524;end_range=210928,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219767.1;locus_tag=CYJ02_RS02955;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_133121708.1;transl_table=11 ##sequence-region NZ_PJUQ01000030.1 1 27898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000030.1 RefSeq region 1 27898 . + . ID=NZ_PJUQ01000030.1:1..27898;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000030.1 RefSeq gene 79 154 . + . ID=gene-CYJ02_RS11000;Name=CYJ02_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11000;old_locus_tag=CYJ02_11000 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 79 154 . + . ID=rna-CYJ02_RS11000;Parent=gene-CYJ02_RS11000;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11000;product=tRNA-Val NZ_PJUQ01000030.1 tRNAscan-SE exon 79 154 . + . ID=exon-CYJ02_RS11000-1;Parent=rna-CYJ02_RS11000;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11000;product=tRNA-Val NZ_PJUQ01000030.1 RefSeq gene 178 253 . + . ID=gene-CYJ02_RS11005;Name=CYJ02_RS11005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11005;old_locus_tag=CYJ02_11005 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 178 253 . + . ID=rna-CYJ02_RS11005;Parent=gene-CYJ02_RS11005;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11005;product=tRNA-Thr NZ_PJUQ01000030.1 tRNAscan-SE exon 178 253 . + . ID=exon-CYJ02_RS11005-1;Parent=rna-CYJ02_RS11005;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11005;product=tRNA-Thr NZ_PJUQ01000030.1 RefSeq gene 260 343 . + . ID=gene-CYJ02_RS11010;Name=CYJ02_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11010;old_locus_tag=CYJ02_11010 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 260 343 . + . ID=rna-CYJ02_RS11010;Parent=gene-CYJ02_RS11010;anticodon=(pos:294..296);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11010;product=tRNA-Tyr NZ_PJUQ01000030.1 tRNAscan-SE exon 260 343 . + . ID=exon-CYJ02_RS11010-1;Parent=rna-CYJ02_RS11010;anticodon=(pos:294..296);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11010;product=tRNA-Tyr NZ_PJUQ01000030.1 RefSeq gene 351 424 . + . ID=gene-CYJ02_RS11015;Name=CYJ02_RS11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11015;old_locus_tag=CYJ02_11015 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 351 424 . + . ID=rna-CYJ02_RS11015;Parent=gene-CYJ02_RS11015;anticodon=(pos:383..385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11015;product=tRNA-Trp NZ_PJUQ01000030.1 tRNAscan-SE exon 351 424 . + . ID=exon-CYJ02_RS11015-1;Parent=rna-CYJ02_RS11015;anticodon=(pos:383..385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11015;product=tRNA-Trp NZ_PJUQ01000030.1 RefSeq gene 427 499 . + . ID=gene-CYJ02_RS11020;Name=CYJ02_RS11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11020;old_locus_tag=CYJ02_11020 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 427 499 . + . ID=rna-CYJ02_RS11020;Parent=gene-CYJ02_RS11020;anticodon=(pos:460..462);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11020;product=tRNA-His NZ_PJUQ01000030.1 tRNAscan-SE exon 427 499 . + . ID=exon-CYJ02_RS11020-1;Parent=rna-CYJ02_RS11020;anticodon=(pos:460..462);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11020;product=tRNA-His NZ_PJUQ01000030.1 RefSeq gene 516 590 . + . ID=gene-CYJ02_RS11025;Name=CYJ02_RS11025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11025;old_locus_tag=CYJ02_11025 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 516 590 . + . ID=rna-CYJ02_RS11025;Parent=gene-CYJ02_RS11025;anticodon=(pos:548..550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11025;product=tRNA-Gln NZ_PJUQ01000030.1 tRNAscan-SE exon 516 590 . + . ID=exon-CYJ02_RS11025-1;Parent=rna-CYJ02_RS11025;anticodon=(pos:548..550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11025;product=tRNA-Gln NZ_PJUQ01000030.1 RefSeq gene 594 666 . + . ID=gene-CYJ02_RS11030;Name=CYJ02_RS11030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11030;old_locus_tag=CYJ02_11030 NZ_PJUQ01000030.1 tRNAscan-SE tRNA 594 666 . + . ID=rna-CYJ02_RS11030;Parent=gene-CYJ02_RS11030;anticodon=(pos:627..629);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11030;product=tRNA-Lys NZ_PJUQ01000030.1 tRNAscan-SE exon 594 666 . + . ID=exon-CYJ02_RS11030-1;Parent=rna-CYJ02_RS11030;anticodon=(pos:627..629);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11030;product=tRNA-Lys NZ_PJUQ01000030.1 RefSeq gene 1044 1949 . + . ID=gene-CYJ02_RS11035;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=CYJ02_RS11035;old_locus_tag=CYJ02_11035 NZ_PJUQ01000030.1 Protein Homology CDS 1044 1949 . + 0 ID=cds-WP_014613286.1;Parent=gene-CYJ02_RS11035;Dbxref=GenBank:WP_014613286.1;Name=WP_014613286.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=CYJ02_RS11035;product=arginase;protein_id=WP_014613286.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 2181 2987 . + . ID=gene-CYJ02_RS11040;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11040;old_locus_tag=CYJ02_11040 NZ_PJUQ01000030.1 Protein Homology CDS 2181 2987 . + 0 ID=cds-WP_014613287.1;Parent=gene-CYJ02_RS11040;Dbxref=GenBank:WP_014613287.1;Name=WP_014613287.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168352.1;locus_tag=CYJ02_RS11040;product=diadenylate cyclase CdaA;protein_id=WP_014613287.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 2988 3920 . + . ID=gene-CYJ02_RS11045;Name=CYJ02_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11045;old_locus_tag=CYJ02_11045 NZ_PJUQ01000030.1 Protein Homology CDS 2988 3920 . + 0 ID=cds-WP_015729470.1;Parent=gene-CYJ02_RS11045;Dbxref=GenBank:WP_015729470.1;Name=WP_015729470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=CYJ02_RS11045;product=CdaR family protein;protein_id=WP_015729470.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 3948 5303 . + . ID=gene-CYJ02_RS11050;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CYJ02_RS11050;old_locus_tag=CYJ02_11050 NZ_PJUQ01000030.1 Protein Homology CDS 3948 5303 . + 0 ID=cds-WP_014613289.1;Parent=gene-CYJ02_RS11050;Dbxref=GenBank:WP_014613289.1;Name=WP_014613289.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613289.1;locus_tag=CYJ02_RS11050;product=phosphoglucosamine mutase;protein_id=WP_014613289.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 5428 5649 . - . ID=gene-CYJ02_RS11055;Name=CYJ02_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11055;old_locus_tag=CYJ02_11055 NZ_PJUQ01000030.1 GeneMarkS-2+ CDS 5428 5649 . - 0 ID=cds-WP_070407697.1;Parent=gene-CYJ02_RS11055;Dbxref=GenBank:WP_070407697.1;Name=WP_070407697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11055;product=hypothetical protein;protein_id=WP_070407697.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 6689 8491 . + . ID=gene-CYJ02_RS11060;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CYJ02_RS11060;old_locus_tag=CYJ02_11060 NZ_PJUQ01000030.1 Protein Homology CDS 6689 8491 . + 0 ID=cds-WP_101431683.1;Parent=gene-CYJ02_RS11060;Dbxref=GenBank:WP_101431683.1;Name=WP_101431683.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CYJ02_RS11060;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_101431683.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 8697 8963 . + . ID=gene-CYJ02_RS11065;Name=CYJ02_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11065;old_locus_tag=CYJ02_11065 NZ_PJUQ01000030.1 Protein Homology CDS 8697 8963 . + 0 ID=cds-WP_037542499.1;Parent=gene-CYJ02_RS11065;Dbxref=GenBank:WP_037542499.1;Name=WP_037542499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219855.1;locus_tag=CYJ02_RS11065;product=hypothetical protein;protein_id=WP_037542499.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 9071 9850 . + . ID=gene-CYJ02_RS11070;Name=CYJ02_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11070;old_locus_tag=CYJ02_11070 NZ_PJUQ01000030.1 Protein Homology CDS 9071 9850 . + 0 ID=cds-WP_101431684.1;Parent=gene-CYJ02_RS11070;Dbxref=GenBank:WP_101431684.1;Name=WP_101431684.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=CYJ02_RS11070;product=ABC transporter ATP-binding protein;protein_id=WP_101431684.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 9925 10779 . + . ID=gene-CYJ02_RS11075;Name=CYJ02_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11075;old_locus_tag=CYJ02_11075 NZ_PJUQ01000030.1 Protein Homology CDS 9925 10779 . + 0 ID=cds-WP_014613299.1;Parent=gene-CYJ02_RS11075;Dbxref=GenBank:WP_014613299.1;Name=WP_014613299.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729462.1;locus_tag=CYJ02_RS11075;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014613299.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 11182 12087 . - . ID=gene-CYJ02_RS11080;Name=CYJ02_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11080;old_locus_tag=CYJ02_11080 NZ_PJUQ01000030.1 Protein Homology CDS 11182 12087 . - 0 ID=cds-WP_101431685.1;Parent=gene-CYJ02_RS11080;Dbxref=GenBank:WP_101431685.1;Name=WP_101431685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169555.1;locus_tag=CYJ02_RS11080;product=lytic transglycosylase;protein_id=WP_101431685.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 12273 12977 . + . ID=gene-CYJ02_RS11085;Name=CYJ02_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11085;old_locus_tag=CYJ02_11085 NZ_PJUQ01000030.1 Protein Homology CDS 12273 12977 . + 0 ID=cds-WP_014613301.1;Parent=gene-CYJ02_RS11085;Dbxref=GenBank:WP_014613301.1;Name=WP_014613301.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169556.1;locus_tag=CYJ02_RS11085;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613301.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 13384 14322 . + . ID=gene-CYJ02_RS11090;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11090;old_locus_tag=CYJ02_11090 NZ_PJUQ01000030.1 Protein Homology CDS 13384 14322 . + 0 ID=cds-WP_014613302.1;Parent=gene-CYJ02_RS11090;Dbxref=GenBank:WP_014613302.1;Name=WP_014613302.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=CYJ02_RS11090;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_014613302.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 14339 14575 . + . ID=gene-CYJ02_RS11095;Name=CYJ02_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11095;old_locus_tag=CYJ02_11095 NZ_PJUQ01000030.1 Protein Homology CDS 14339 14575 . + 0 ID=cds-WP_014613303.1;Parent=gene-CYJ02_RS11095;Dbxref=GenBank:WP_014613303.1;Name=WP_014613303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729458.1;locus_tag=CYJ02_RS11095;product=hypothetical protein;protein_id=WP_014613303.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 14652 16016 . + . ID=gene-CYJ02_RS11100;Name=CYJ02_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11100;old_locus_tag=CYJ02_11100 NZ_PJUQ01000030.1 Protein Homology CDS 14652 16016 . + 0 ID=cds-WP_014613304.1;Parent=gene-CYJ02_RS11100;Dbxref=GenBank:WP_014613304.1;Name=WP_014613304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=CYJ02_RS11100;product=EVE domain-containing protein;protein_id=WP_014613304.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 16746 18176 . + . ID=gene-CYJ02_RS11110;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11110;old_locus_tag=CYJ02_11110 NZ_PJUQ01000030.1 Protein Homology CDS 16746 18176 . + 0 ID=cds-WP_101431686.1;Parent=gene-CYJ02_RS11110;Dbxref=GenBank:WP_101431686.1;Name=WP_101431686.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613305.1;locus_tag=CYJ02_RS11110;product=Na+/H+ antiporter NhaC;protein_id=WP_101431686.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 18241 18645 . + . ID=gene-CYJ02_RS11115;Name=CYJ02_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11115;old_locus_tag=CYJ02_11115 NZ_PJUQ01000030.1 Protein Homology CDS 18241 18645 . + 0 ID=cds-WP_101431687.1;Parent=gene-CYJ02_RS11115;Dbxref=GenBank:WP_101431687.1;Name=WP_101431687.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165774.1;locus_tag=CYJ02_RS11115;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_101431687.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 18875 19585 . - . ID=gene-CYJ02_RS11120;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11120;old_locus_tag=CYJ02_11120 NZ_PJUQ01000030.1 Protein Homology CDS 18875 19585 . - 0 ID=cds-WP_015729454.1;Parent=gene-CYJ02_RS11120;Dbxref=GenBank:WP_015729454.1;Name=WP_015729454.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CYJ02_RS11120;product=purine-nucleoside phosphorylase;protein_id=WP_015729454.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 19801 21102 . + . ID=gene-CYJ02_RS11125;Name=CYJ02_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11125;old_locus_tag=CYJ02_11125 NZ_PJUQ01000030.1 Protein Homology CDS 19801 21102 . + 0 ID=cds-WP_037542509.1;Parent=gene-CYJ02_RS11125;Dbxref=GenBank:WP_037542509.1;Name=WP_037542509.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=CYJ02_RS11125;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_037542509.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 21114 21467 . + . ID=gene-CYJ02_RS11130;Name=CYJ02_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11130;old_locus_tag=CYJ02_11130 NZ_PJUQ01000030.1 Protein Homology CDS 21114 21467 . + 0 ID=cds-WP_014613309.1;Parent=gene-CYJ02_RS11130;Dbxref=GenBank:WP_014613309.1;Name=WP_014613309.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=CYJ02_RS11130;product=DoxX family protein;protein_id=WP_014613309.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 21529 21999 . - . ID=gene-CYJ02_RS11135;Name=CYJ02_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11135;old_locus_tag=CYJ02_11135 NZ_PJUQ01000030.1 Protein Homology CDS 21529 21999 . - 0 ID=cds-WP_101431688.1;Parent=gene-CYJ02_RS11135;Dbxref=GenBank:WP_101431688.1;Name=WP_101431688.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CYJ02_RS11135;product=S-ribosylhomocysteine lyase;protein_id=WP_101431688.1;transl_table=11 NZ_PJUQ01000030.1 cmsearch riboswitch 22296 22401 . + . ID=id-NZ_PJUQ01000030.1:22296..22401;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000030.1 RefSeq gene 22566 23684 . + . ID=gene-CYJ02_RS11140;Name=CYJ02_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11140;old_locus_tag=CYJ02_11140 NZ_PJUQ01000030.1 Protein Homology CDS 22566 23684 . + 0 ID=cds-WP_051144746.1;Parent=gene-CYJ02_RS11140;Dbxref=GenBank:WP_051144746.1;Name=WP_051144746.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169567.1;locus_tag=CYJ02_RS11140;product=M20 family metallopeptidase;protein_id=WP_051144746.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 23687 24877 . + . ID=gene-CYJ02_RS11145;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=CYJ02_RS11145;old_locus_tag=CYJ02_11145 NZ_PJUQ01000030.1 Protein Homology CDS 23687 24877 . + 0 ID=cds-WP_014613312.1;Parent=gene-CYJ02_RS11145;Dbxref=GenBank:WP_014613312.1;Name=WP_014613312.1;Ontology_term=GO:0006555,GO:1901605,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=methionine metabolic process|0006555||IEA,alpha-amino acid metabolic process|1901605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=CYJ02_RS11145;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_014613312.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 24994 25665 . + . ID=gene-CYJ02_RS11150;Name=CYJ02_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11150;old_locus_tag=CYJ02_11150 NZ_PJUQ01000030.1 Protein Homology CDS 24994 25665 . + 0 ID=cds-WP_014613313.1;Parent=gene-CYJ02_RS11150;Dbxref=GenBank:WP_014613313.1;Name=WP_014613313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=CYJ02_RS11150;product=DUF2750 domain-containing protein;protein_id=WP_014613313.1;transl_table=11 NZ_PJUQ01000030.1 RefSeq gene 26075 26872 . - . ID=gene-CYJ02_RS11155;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=CYJ02_RS11155;old_locus_tag=CYJ02_11155 NZ_PJUQ01000030.1 Protein Homology CDS 26075 26872 . - 0 ID=cds-WP_014613315.1;Parent=gene-CYJ02_RS11155;Dbxref=GenBank:WP_014613315.1;Name=WP_014613315.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=CYJ02_RS11155;product=type II pantothenate kinase;protein_id=WP_014613315.1;transl_table=11 ##sequence-region NZ_PJUQ01000031.1 1 26772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000031.1 RefSeq region 1 26772 . + . ID=NZ_PJUQ01000031.1:1..26772;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000031.1 RefSeq gene 309 1532 . + . ID=gene-CYJ02_RS11160;Name=CYJ02_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11160;old_locus_tag=CYJ02_11160 NZ_PJUQ01000031.1 Protein Homology CDS 309 1532 . + 0 ID=cds-WP_014614465.1;Parent=gene-CYJ02_RS11160;Dbxref=GenBank:WP_014614465.1;Name=WP_014614465.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728783.1;locus_tag=CYJ02_RS11160;product=serine hydrolase domain-containing protein;protein_id=WP_014614465.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 1589 1960 . - . ID=gene-CYJ02_RS11165;Name=CYJ02_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11165;old_locus_tag=CYJ02_11165 NZ_PJUQ01000031.1 Protein Homology CDS 1589 1960 . - 0 ID=cds-WP_014614464.1;Parent=gene-CYJ02_RS11165;Dbxref=GenBank:WP_014614464.1;Name=WP_014614464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=CYJ02_RS11165;product=DUF1722 domain-containing protein;protein_id=WP_014614464.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 1971 2459 . - . ID=gene-CYJ02_RS11170;Name=CYJ02_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11170;old_locus_tag=CYJ02_11170 NZ_PJUQ01000031.1 Protein Homology CDS 1971 2459 . - 0 ID=cds-WP_014614463.1;Parent=gene-CYJ02_RS11170;Dbxref=GenBank:WP_014614463.1;Name=WP_014614463.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614463.1;locus_tag=CYJ02_RS11170;product=GNAT family N-acetyltransferase;protein_id=WP_014614463.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 2882 3301 . - . ID=gene-CYJ02_RS11175;Name=CYJ02_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11175;old_locus_tag=CYJ02_11175 NZ_PJUQ01000031.1 Protein Homology CDS 2882 3301 . - 0 ID=cds-WP_031253630.1;Parent=gene-CYJ02_RS11175;Dbxref=GenBank:WP_031253630.1;Name=WP_031253630.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637484.1;locus_tag=CYJ02_RS11175;product=Ohr family peroxiredoxin;protein_id=WP_031253630.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 3450 4454 . + . ID=gene-CYJ02_RS11180;Name=CYJ02_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11180;old_locus_tag=CYJ02_11180 NZ_PJUQ01000031.1 Protein Homology CDS 3450 4454 . + 0 ID=cds-WP_101431689.1;Parent=gene-CYJ02_RS11180;Dbxref=GenBank:WP_101431689.1;Name=WP_101431689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614461.1;locus_tag=CYJ02_RS11180;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_101431689.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 4475 5200 . + . ID=gene-CYJ02_RS11185;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11185;old_locus_tag=CYJ02_11185 NZ_PJUQ01000031.1 Protein Homology CDS 4475 5200 . + 0 ID=cds-WP_096533925.1;Parent=gene-CYJ02_RS11185;Dbxref=GenBank:WP_096533925.1;Name=WP_096533925.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=CYJ02_RS11185;product=type I 3-dehydroquinate dehydratase;protein_id=WP_096533925.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 5255 5800 . + . ID=gene-CYJ02_RS11190;Name=CYJ02_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11190;old_locus_tag=CYJ02_11190 NZ_PJUQ01000031.1 Protein Homology CDS 5255 5800 . + 0 ID=cds-WP_014614459.1;Parent=gene-CYJ02_RS11190;Dbxref=GenBank:WP_014614459.1;Name=WP_014614459.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614459.1;locus_tag=CYJ02_RS11190;product=nitroreductase family protein;protein_id=WP_014614459.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 5930 6250 . - . ID=gene-CYJ02_RS11195;Name=CYJ02_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11195;old_locus_tag=CYJ02_11195 NZ_PJUQ01000031.1 Protein Homology CDS 5930 6250 . - 0 ID=cds-WP_014614458.1;Parent=gene-CYJ02_RS11195;Dbxref=GenBank:WP_014614458.1;Name=WP_014614458.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168947.1;locus_tag=CYJ02_RS11195;product=thioredoxin family protein;protein_id=WP_014614458.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 6534 6890 . + . ID=gene-CYJ02_RS11200;Name=CYJ02_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11200;old_locus_tag=CYJ02_11200 NZ_PJUQ01000031.1 Protein Homology CDS 6534 6890 . + 0 ID=cds-WP_031253623.1;Parent=gene-CYJ02_RS11200;Dbxref=GenBank:WP_031253623.1;Name=WP_031253623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479305.1;locus_tag=CYJ02_RS11200;product=arsenate reductase family protein;protein_id=WP_031253623.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 6964 7344 . + . ID=gene-CYJ02_RS11205;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CYJ02_RS11205;old_locus_tag=CYJ02_11205 NZ_PJUQ01000031.1 Protein Homology CDS 6964 7344 . + 0 ID=cds-WP_014614456.1;Parent=gene-CYJ02_RS11205;Dbxref=GenBank:WP_014614456.1;Name=WP_014614456.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499390.1;locus_tag=CYJ02_RS11205;product=glycine cleavage system protein GcvH;protein_id=WP_014614456.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 7423 7818 . + . ID=gene-CYJ02_RS11210;Name=CYJ02_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11210;old_locus_tag=CYJ02_11210 NZ_PJUQ01000031.1 Protein Homology CDS 7423 7818 . + 0 ID=cds-WP_101431690.1;Parent=gene-CYJ02_RS11210;Dbxref=GenBank:WP_101431690.1;Name=WP_101431690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=CYJ02_RS11210;product=toprim domain-containing protein;protein_id=WP_101431690.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 7784 8101 . + . ID=gene-CYJ02_RS11215;Name=CYJ02_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11215;old_locus_tag=CYJ02_11215 NZ_PJUQ01000031.1 Protein Homology CDS 7784 8101 . + 0 ID=cds-WP_014614454.1;Parent=gene-CYJ02_RS11215;Dbxref=GenBank:WP_014614454.1;Name=WP_014614454.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=CYJ02_RS11215;product=thioredoxin family protein;protein_id=WP_014614454.1;transl_table=11 NZ_PJUQ01000031.1 cmsearch riboswitch 8139 8248 . + . ID=id-NZ_PJUQ01000031.1:8139..8248;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000031.1 RefSeq gene 8344 9372 . + . ID=gene-CYJ02_RS11220;Name=CYJ02_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11220;old_locus_tag=CYJ02_11220 NZ_PJUQ01000031.1 Protein Homology CDS 8344 9372 . + 0 ID=cds-WP_096636622.1;Parent=gene-CYJ02_RS11220;Dbxref=GenBank:WP_096636622.1;Name=WP_096636622.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276311.1;locus_tag=CYJ02_RS11220;product=methionine ABC transporter ATP-binding protein;protein_id=WP_096636622.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 9365 10060 . + . ID=gene-CYJ02_RS11225;Name=CYJ02_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11225;old_locus_tag=CYJ02_11225 NZ_PJUQ01000031.1 Protein Homology CDS 9365 10060 . + 0 ID=cds-WP_063284816.1;Parent=gene-CYJ02_RS11225;Dbxref=GenBank:WP_063284816.1;Name=WP_063284816.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CYJ02_RS11225;product=methionine ABC transporter permease;protein_id=WP_063284816.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 10080 10901 . + . ID=gene-CYJ02_RS11230;Name=CYJ02_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11230;old_locus_tag=CYJ02_11230 NZ_PJUQ01000031.1 Protein Homology CDS 10080 10901 . + 0 ID=cds-WP_014614450.1;Parent=gene-CYJ02_RS11230;Dbxref=GenBank:WP_014614450.1;Name=WP_014614450.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276309.1;locus_tag=CYJ02_RS11230;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014614450.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 11030 11848 . + . ID=gene-CYJ02_RS11235;Name=CYJ02_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11235;old_locus_tag=CYJ02_11235 NZ_PJUQ01000031.1 Protein Homology CDS 11030 11848 . + 0 ID=cds-WP_020219509.1;Parent=gene-CYJ02_RS11235;Dbxref=GenBank:WP_020219509.1;Name=WP_020219509.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614449.1;locus_tag=CYJ02_RS11235;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_020219509.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 12145 13005 . - . ID=gene-CYJ02_RS11240;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=CYJ02_RS11240;old_locus_tag=CYJ02_11240 NZ_PJUQ01000031.1 Protein Homology CDS 12145 13005 . - 0 ID=cds-WP_015728788.1;Parent=gene-CYJ02_RS11240;Dbxref=GenBank:WP_015728788.1;Name=WP_015728788.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614448.1;locus_tag=CYJ02_RS11240;product=polyprenyl-phosphate transporter PopT;protein_id=WP_015728788.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 13303 14073 . + . ID=gene-CYJ02_RS11245;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11245;old_locus_tag=CYJ02_11245 NZ_PJUQ01000031.1 Protein Homology CDS 13303 14073 . + 0 ID=cds-WP_014614447.1;Parent=gene-CYJ02_RS11245;Dbxref=GenBank:WP_014614447.1;Name=WP_014614447.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=CYJ02_RS11245;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_014614447.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 14095 15402 . + . ID=gene-CYJ02_RS11250;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11250;old_locus_tag=CYJ02_11250 NZ_PJUQ01000031.1 Protein Homology CDS 14095 15402 . + 0 ID=cds-WP_020219508.1;Parent=gene-CYJ02_RS11250;Dbxref=GenBank:WP_020219508.1;Name=WP_020219508.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=CYJ02_RS11250;product=Fe-S cluster assembly protein SufD;protein_id=WP_020219508.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 15431 16672 . + . ID=gene-CYJ02_RS11255;Name=CYJ02_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11255;old_locus_tag=CYJ02_11255 NZ_PJUQ01000031.1 Protein Homology CDS 15431 16672 . + 0 ID=cds-WP_014614445.1;Parent=gene-CYJ02_RS11255;Dbxref=GenBank:WP_014614445.1;Name=WP_014614445.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533341.1;locus_tag=CYJ02_RS11255;product=cysteine desulfurase;protein_id=WP_014614445.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 16662 17111 . + . ID=gene-CYJ02_RS11260;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=CYJ02_RS11260;old_locus_tag=CYJ02_11260 NZ_PJUQ01000031.1 Protein Homology CDS 16662 17111 . + 0 ID=cds-WP_014614444.1;Parent=gene-CYJ02_RS11260;Dbxref=GenBank:WP_014614444.1;Name=WP_014614444.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=CYJ02_RS11260;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_014614444.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 17209 18606 . + . ID=gene-CYJ02_RS11265;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11265;old_locus_tag=CYJ02_11265 NZ_PJUQ01000031.1 Protein Homology CDS 17209 18606 . + 0 ID=cds-WP_014614443.1;Parent=gene-CYJ02_RS11265;Dbxref=GenBank:WP_014614443.1;Name=WP_014614443.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CYJ02_RS11265;product=Fe-S cluster assembly protein SufB;protein_id=WP_014614443.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 18752 19036 . + . ID=gene-CYJ02_RS11270;Name=CYJ02_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11270;old_locus_tag=CYJ02_11270 NZ_PJUQ01000031.1 Protein Homology CDS 18752 19036 . + 0 ID=cds-WP_070407539.1;Parent=gene-CYJ02_RS11270;Dbxref=GenBank:WP_070407539.1;Name=WP_070407539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728852.1;locus_tag=CYJ02_RS11270;product=type 1 glutamine amidotransferase family protein;protein_id=WP_070407539.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 19326 20324 . + . ID=gene-CYJ02_RS11275;Name=CYJ02_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11275;old_locus_tag=CYJ02_11275 NZ_PJUQ01000031.1 Protein Homology CDS 19326 20324 . + 0 ID=cds-WP_101431691.1;Parent=gene-CYJ02_RS11275;Dbxref=GenBank:WP_101431691.1;Name=WP_101431691.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=CYJ02_RS11275;product=hemolysin family protein;protein_id=WP_101431691.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 20583 20927 . + . ID=gene-CYJ02_RS12835;Name=CYJ02_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12835 NZ_PJUQ01000031.1 Protein Homology CDS 20583 20927 . + 0 ID=cds-WP_241901345.1;Parent=gene-CYJ02_RS12835;Dbxref=GenBank:WP_241901345.1;Name=WP_241901345.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: protein motif:HMM:NF015047.7;locus_tag=CYJ02_RS12835;product=nitronate monooxygenase;protein_id=WP_241901345.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 21234 21356 . + . ID=gene-CYJ02_RS12925;Name=CYJ02_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12925 NZ_PJUQ01000031.1 GeneMarkS-2+ CDS 21234 21356 . + 0 ID=cds-WP_014614440.1;Parent=gene-CYJ02_RS12925;Dbxref=GenBank:WP_014614440.1;Name=WP_014614440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12925;product=hypothetical protein;protein_id=WP_014614440.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 21389 22096 . - . ID=gene-CYJ02_RS11285;Name=CYJ02_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11285;old_locus_tag=CYJ02_11285 NZ_PJUQ01000031.1 Protein Homology CDS 21389 22096 . - 0 ID=cds-WP_014614439.1;Parent=gene-CYJ02_RS11285;Dbxref=GenBank:WP_014614439.1;Name=WP_014614439.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219503.1;locus_tag=CYJ02_RS11285;product=alpha/beta hydrolase family protein;protein_id=WP_014614439.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 22220 23068 . + . ID=gene-CYJ02_RS11290;Name=CYJ02_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11290;old_locus_tag=CYJ02_11290 NZ_PJUQ01000031.1 Protein Homology CDS 22220 23068 . + 0 ID=cds-WP_014614438.1;Parent=gene-CYJ02_RS11290;Dbxref=GenBank:WP_014614438.1;Name=WP_014614438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=CYJ02_RS11290;product=DUF72 domain-containing protein;protein_id=WP_014614438.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 23077 23907 . + . ID=gene-CYJ02_RS11295;Name=CYJ02_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11295;old_locus_tag=CYJ02_11295 NZ_PJUQ01000031.1 Protein Homology CDS 23077 23907 . + 0 ID=cds-WP_041613273.1;Parent=gene-CYJ02_RS11295;Dbxref=GenBank:WP_041613273.1;Name=WP_041613273.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956137.1;locus_tag=CYJ02_RS11295;product=sulfite exporter TauE/SafE family protein;protein_id=WP_041613273.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 23924 25243 . + . ID=gene-CYJ02_RS11300;Name=CYJ02_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11300;old_locus_tag=CYJ02_11300 NZ_PJUQ01000031.1 Protein Homology CDS 23924 25243 . + 0 ID=cds-WP_014614436.1;Parent=gene-CYJ02_RS11300;Dbxref=GenBank:WP_014614436.1;Name=WP_014614436.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728857.1;locus_tag=CYJ02_RS11300;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_014614436.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 25329 26246 . + . ID=gene-CYJ02_RS11305;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11305;old_locus_tag=CYJ02_11305 NZ_PJUQ01000031.1 Protein Homology CDS 25329 26246 . + 0 ID=cds-WP_014614435.1;Parent=gene-CYJ02_RS11305;Dbxref=GenBank:WP_014614435.1;Name=WP_014614435.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614435.1;locus_tag=CYJ02_RS11305;product=lipoyl synthase;protein_id=WP_014614435.1;transl_table=11 NZ_PJUQ01000031.1 RefSeq gene 26265 26630 . + . ID=gene-CYJ02_RS11310;Name=CYJ02_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11310;old_locus_tag=CYJ02_11310 NZ_PJUQ01000031.1 Protein Homology CDS 26265 26630 . + 0 ID=cds-WP_014614434.1;Parent=gene-CYJ02_RS11310;Dbxref=GenBank:WP_014614434.1;Name=WP_014614434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=CYJ02_RS11310;product=YutD family protein;protein_id=WP_014614434.1;transl_table=11 ##sequence-region NZ_PJUQ01000032.1 1 31442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000032.1 RefSeq region 1 31442 . + . ID=NZ_PJUQ01000032.1:1..31442;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000032.1 RefSeq gene 195 1286 . + . ID=gene-CYJ02_RS11315;Name=CYJ02_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11315;old_locus_tag=CYJ02_11315 NZ_PJUQ01000032.1 Protein Homology CDS 195 1286 . + 0 ID=cds-WP_101431692.1;Parent=gene-CYJ02_RS11315;Dbxref=GenBank:WP_101431692.1;Name=WP_101431692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.7;locus_tag=CYJ02_RS11315;product=type III PLP-dependent enzyme domain-containing protein;protein_id=WP_101431692.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 1267 2610 . + . ID=gene-CYJ02_RS11320;Name=CYJ02_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11320;old_locus_tag=CYJ02_11320 NZ_PJUQ01000032.1 GeneMarkS-2+ CDS 1267 2610 . + 0 ID=cds-WP_037543323.1;Parent=gene-CYJ02_RS11320;Dbxref=GenBank:WP_037543323.1;Name=WP_037543323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11320;product=alkaline phosphatase family protein;protein_id=WP_037543323.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 2607 3845 . + . ID=gene-CYJ02_RS11325;Name=CYJ02_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11325;old_locus_tag=CYJ02_11325 NZ_PJUQ01000032.1 Protein Homology CDS 2607 3845 . + 0 ID=cds-WP_037543320.1;Parent=gene-CYJ02_RS11325;Dbxref=GenBank:WP_037543320.1;Name=WP_037543320.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ02_RS11325;product=MFS transporter;protein_id=WP_037543320.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 3842 4789 . + . ID=gene-CYJ02_RS11330;Name=CYJ02_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11330;old_locus_tag=CYJ02_11330 NZ_PJUQ01000032.1 Protein Homology CDS 3842 4789 . + 0 ID=cds-WP_037543317.1;Parent=gene-CYJ02_RS11330;Dbxref=GenBank:WP_037543317.1;Name=WP_037543317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025114.7;locus_tag=CYJ02_RS11330;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037543317.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 4839 4982 . + . ID=gene-CYJ02_RS12415;Name=CYJ02_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12415 NZ_PJUQ01000032.1 GeneMarkS-2+ CDS 4839 4982 . + 0 ID=cds-WP_157929437.1;Parent=gene-CYJ02_RS12415;Dbxref=GenBank:WP_157929437.1;Name=WP_157929437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12415;product=hypothetical protein;protein_id=WP_157929437.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 5436 7115 . - . ID=gene-CYJ02_RS11335;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11335;old_locus_tag=CYJ02_11335 NZ_PJUQ01000032.1 Protein Homology CDS 5436 7115 . - 0 ID=cds-WP_014614255.1;Parent=gene-CYJ02_RS11335;Dbxref=GenBank:WP_014614255.1;Name=WP_014614255.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493055.1;locus_tag=CYJ02_RS11335;product=ribonuclease J1;protein_id=WP_014614255.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 7115 7330 . - . ID=gene-CYJ02_RS11340;Name=CYJ02_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11340;old_locus_tag=CYJ02_11340 NZ_PJUQ01000032.1 Protein Homology CDS 7115 7330 . - 0 ID=cds-WP_014614254.1;Parent=gene-CYJ02_RS11340;Dbxref=GenBank:WP_014614254.1;Name=WP_014614254.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CYJ02_RS11340;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_014614254.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 7669 7941 . + . ID=gene-CYJ02_RS11345;Name=CYJ02_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11345;old_locus_tag=CYJ02_11345 NZ_PJUQ01000032.1 Protein Homology CDS 7669 7941 . + 0 ID=cds-WP_096548552.1;Parent=gene-CYJ02_RS11345;Dbxref=GenBank:WP_096548552.1;Name=WP_096548552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=CYJ02_RS11345;product=hypothetical protein;protein_id=WP_096548552.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 8555 9106 . - . ID=gene-CYJ02_RS11350;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CYJ02_RS11350;old_locus_tag=CYJ02_11350 NZ_PJUQ01000032.1 Protein Homology CDS 8555 9106 . - 0 ID=cds-WP_014614251.1;Parent=gene-CYJ02_RS11350;Dbxref=GenBank:WP_014614251.1;Name=WP_014614251.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=CYJ02_RS11350;product=peptide deformylase;protein_id=WP_014614251.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 9351 9983 . + . ID=gene-CYJ02_RS11355;Name=CYJ02_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11355;old_locus_tag=CYJ02_11355 NZ_PJUQ01000032.1 Protein Homology CDS 9351 9983 . + 0 ID=cds-WP_015728956.1;Parent=gene-CYJ02_RS11355;Dbxref=GenBank:WP_015728956.1;Name=WP_015728956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=CYJ02_RS11355;product=YkyA family protein;protein_id=WP_015728956.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 10147 11259 . + . ID=gene-CYJ02_RS11360;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11360;old_locus_tag=CYJ02_11360 NZ_PJUQ01000032.1 Protein Homology CDS 10147 11259 . + 0 ID=cds-WP_014614249.1;Parent=gene-CYJ02_RS11360;Dbxref=GenBank:WP_014614249.1;Name=WP_014614249.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CYJ02_RS11360;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_014614249.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 11263 12240 . + . ID=gene-CYJ02_RS11365;Name=CYJ02_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11365;old_locus_tag=CYJ02_11365 NZ_PJUQ01000032.1 Protein Homology CDS 11263 12240 . + 0 ID=cds-WP_014614248.1;Parent=gene-CYJ02_RS11365;Dbxref=GenBank:WP_014614248.1;Name=WP_014614248.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CYJ02_RS11365;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014614248.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 12396 13697 . + . ID=gene-CYJ02_RS11370;Name=CYJ02_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11370;old_locus_tag=CYJ02_11370 NZ_PJUQ01000032.1 Protein Homology CDS 12396 13697 . + 0 ID=cds-WP_014614247.1;Parent=gene-CYJ02_RS11370;Dbxref=GenBank:WP_014614247.1;Name=WP_014614247.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CYJ02_RS11370;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_014614247.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 13701 15107 . + . ID=gene-CYJ02_RS11375;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11375;old_locus_tag=CYJ02_11375 NZ_PJUQ01000032.1 Protein Homology CDS 13701 15107 . + 0 ID=cds-WP_014614246.1;Parent=gene-CYJ02_RS11375;Dbxref=GenBank:WP_014614246.1;Name=WP_014614246.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CYJ02_RS11375;product=dihydrolipoyl dehydrogenase;protein_id=WP_014614246.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 15917 16189 . + . ID=gene-CYJ02_RS11380;Name=CYJ02_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11380;old_locus_tag=CYJ02_11380 NZ_PJUQ01000032.1 Protein Homology CDS 15917 16189 . + 0 ID=cds-WP_014614245.1;Parent=gene-CYJ02_RS11380;Dbxref=GenBank:WP_014614245.1;Name=WP_014614245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=CYJ02_RS11380;product=UPF0223 family protein;protein_id=WP_014614245.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 16292 16831 . + . ID=gene-CYJ02_RS11385;Name=CYJ02_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11385;old_locus_tag=CYJ02_11385 NZ_PJUQ01000032.1 Protein Homology CDS 16292 16831 . + 0 ID=cds-WP_015728957.1;Parent=gene-CYJ02_RS11385;Dbxref=GenBank:WP_015728957.1;Name=WP_015728957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=CYJ02_RS11385;product=helix-turn-helix domain-containing protein;protein_id=WP_015728957.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 16846 17946 . + . ID=gene-CYJ02_RS11390;Name=CYJ02_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11390;old_locus_tag=CYJ02_11390 NZ_PJUQ01000032.1 Protein Homology CDS 16846 17946 . + 0 ID=cds-WP_014614243.1;Parent=gene-CYJ02_RS11390;Dbxref=GenBank:WP_014614243.1;Name=WP_014614243.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=CYJ02_RS11390;product=ABC transporter ATP-binding protein;protein_id=WP_014614243.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 17933 18739 . + . ID=gene-CYJ02_RS11395;Name=CYJ02_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11395;old_locus_tag=CYJ02_11395 NZ_PJUQ01000032.1 Protein Homology CDS 17933 18739 . + 0 ID=cds-WP_014614242.1;Parent=gene-CYJ02_RS11395;Dbxref=GenBank:WP_014614242.1;Name=WP_014614242.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=CYJ02_RS11395;product=ABC transporter permease;protein_id=WP_014614242.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 18736 19548 . + . ID=gene-CYJ02_RS11400;Name=CYJ02_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11400;old_locus_tag=CYJ02_11400 NZ_PJUQ01000032.1 Protein Homology CDS 18736 19548 . + 0 ID=cds-WP_014614241.1;Parent=gene-CYJ02_RS11400;Dbxref=GenBank:WP_014614241.1;Name=WP_014614241.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=CYJ02_RS11400;product=ABC transporter permease;protein_id=WP_014614241.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 19545 20618 . + . ID=gene-CYJ02_RS11405;Name=CYJ02_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11405;old_locus_tag=CYJ02_11405 NZ_PJUQ01000032.1 Protein Homology CDS 19545 20618 . + 0 ID=cds-WP_015728959.1;Parent=gene-CYJ02_RS11405;Dbxref=GenBank:WP_015728959.1;Name=WP_015728959.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=CYJ02_RS11405;product=ABC transporter substrate-binding protein;protein_id=WP_015728959.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 20690 21700 . + . ID=gene-CYJ02_RS11410;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11410;old_locus_tag=CYJ02_11410 NZ_PJUQ01000032.1 Protein Homology CDS 20690 21700 . + 0 ID=cds-WP_101431693.1;Parent=gene-CYJ02_RS11410;Dbxref=GenBank:WP_101431693.1;Name=WP_101431693.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220276.1;locus_tag=CYJ02_RS11410;product=lipoteichoic acid stability factor AuxB;protein_id=WP_101431693.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 21927 22616 . + . ID=gene-CYJ02_RS11415;Name=CYJ02_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11415;old_locus_tag=CYJ02_11415 NZ_PJUQ01000032.1 Protein Homology CDS 21927 22616 . + 0 ID=cds-WP_101431694.1;Parent=gene-CYJ02_RS11415;Dbxref=GenBank:WP_101431694.1;Name=WP_101431694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220275.1;locus_tag=CYJ02_RS11415;product=DUF4064 domain-containing protein;protein_id=WP_101431694.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 23300 23911 . - . ID=gene-CYJ02_RS11420;Name=CYJ02_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11420;old_locus_tag=CYJ02_11420 NZ_PJUQ01000032.1 Protein Homology CDS 23300 23911 . - 0 ID=cds-WP_014614237.1;Parent=gene-CYJ02_RS11420;Dbxref=GenBank:WP_014614237.1;Name=WP_014614237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=CYJ02_RS11420;product=YktB family protein;protein_id=WP_014614237.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 24029 24847 . + . ID=gene-CYJ02_RS11425;Name=CYJ02_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11425;old_locus_tag=CYJ02_11425 NZ_PJUQ01000032.1 Protein Homology CDS 24029 24847 . + 0 ID=cds-WP_014614236.1;Parent=gene-CYJ02_RS11425;Dbxref=GenBank:WP_014614236.1;Name=WP_014614236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614236.1;locus_tag=CYJ02_RS11425;product=inositol monophosphatase family protein;protein_id=WP_014614236.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 25075 25266 . - . ID=gene-CYJ02_RS11430;Name=CYJ02_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11430;old_locus_tag=CYJ02_11430 NZ_PJUQ01000032.1 Protein Homology CDS 25075 25266 . - 0 ID=cds-WP_225549974.1;Parent=gene-CYJ02_RS11430;Dbxref=GenBank:WP_225549974.1;Name=WP_225549974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446184.1;locus_tag=CYJ02_RS11430;product=DUF5325 family protein;protein_id=WP_225549974.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 25357 27207 . + . ID=gene-CYJ02_RS11435;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11435;old_locus_tag=CYJ02_11435 NZ_PJUQ01000032.1 Protein Homology CDS 25357 27207 . + 0 ID=cds-WP_014614234.1;Parent=gene-CYJ02_RS11435;Dbxref=GenBank:WP_014614234.1;Name=WP_014614234.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614234.1;locus_tag=CYJ02_RS11435;product=translational GTPase TypA;protein_id=WP_014614234.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 27636 28763 . + . ID=gene-CYJ02_RS11440;Name=CYJ02_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11440;old_locus_tag=CYJ02_11440 NZ_PJUQ01000032.1 Protein Homology CDS 27636 28763 . + 0 ID=cds-WP_014614233.1;Parent=gene-CYJ02_RS11440;Dbxref=GenBank:WP_014614233.1;Name=WP_014614233.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614233.1;locus_tag=CYJ02_RS11440;product=NADH-dependent flavin oxidoreductase;protein_id=WP_014614233.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 28886 29089 . - . ID=gene-CYJ02_RS11445;Name=CYJ02_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11445;old_locus_tag=CYJ02_11445 NZ_PJUQ01000032.1 Protein Homology CDS 28886 29089 . - 0 ID=cds-WP_063284571.1;Parent=gene-CYJ02_RS11445;Dbxref=GenBank:WP_063284571.1;Name=WP_063284571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450673.1;locus_tag=CYJ02_RS11445;product=DUF2197 domain-containing protein;protein_id=WP_063284571.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 29090 29572 . - . ID=gene-CYJ02_RS11450;Name=CYJ02_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11450;old_locus_tag=CYJ02_11450 NZ_PJUQ01000032.1 Protein Homology CDS 29090 29572 . - 0 ID=cds-WP_014614231.1;Parent=gene-CYJ02_RS11450;Dbxref=GenBank:WP_014614231.1;Name=WP_014614231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168169.1;locus_tag=CYJ02_RS11450;product=hypothetical protein;protein_id=WP_014614231.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 29709 29984 . + . ID=gene-CYJ02_RS11455;Name=CYJ02_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11455;old_locus_tag=CYJ02_11455 NZ_PJUQ01000032.1 Protein Homology CDS 29709 29984 . + 0 ID=cds-WP_014614230.1;Parent=gene-CYJ02_RS11455;Dbxref=GenBank:WP_014614230.1;Name=WP_014614230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499608.1;locus_tag=CYJ02_RS11455;product=Fpa/YlaN family protein;protein_id=WP_014614230.1;transl_table=11 NZ_PJUQ01000032.1 RefSeq gene 30055 31287 . + . ID=gene-CYJ02_RS11460;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CYJ02_RS11460;old_locus_tag=CYJ02_11460 NZ_PJUQ01000032.1 Protein Homology CDS 30055 31287 . + 0 ID=cds-WP_014614229.1;Parent=gene-CYJ02_RS11460;Dbxref=GenBank:WP_014614229.1;Name=WP_014614229.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168168.1;locus_tag=CYJ02_RS11460;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_014614229.1;transl_table=11 ##sequence-region NZ_PJUQ01000033.1 1 2453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000033.1 RefSeq region 1 2453 . + . ID=NZ_PJUQ01000033.1:1..2453;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000033.1 RefSeq gene 259 531 . + . ID=gene-CYJ02_RS11465;Name=CYJ02_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11465;old_locus_tag=CYJ02_11465 NZ_PJUQ01000033.1 GeneMarkS-2+ CDS 259 531 . + 0 ID=cds-WP_100004571.1;Parent=gene-CYJ02_RS11465;Dbxref=GenBank:WP_100004571.1;Name=WP_100004571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11465;product=hypothetical protein;protein_id=WP_100004571.1;transl_table=11 NZ_PJUQ01000033.1 RefSeq gene 1388 2326 . + . ID=gene-CYJ02_RS11470;Name=CYJ02_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11470;old_locus_tag=CYJ02_11470 NZ_PJUQ01000033.1 Protein Homology CDS 1388 2326 . + 0 ID=cds-WP_100004570.1;Parent=gene-CYJ02_RS11470;Dbxref=GenBank:WP_100004570.1;Name=WP_100004570.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101962.1;locus_tag=CYJ02_RS11470;product=replication initiation factor domain-containing protein;protein_id=WP_100004570.1;transl_table=11 ##sequence-region NZ_PJUQ01000034.1 1 15751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000034.1 RefSeq region 1 15751 . + . ID=NZ_PJUQ01000034.1:1..15751;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000034.1 RefSeq gene 183 1205 . - . ID=gene-CYJ02_RS11475;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11475;old_locus_tag=CYJ02_11475 NZ_PJUQ01000034.1 Protein Homology CDS 183 1205 . - 0 ID=cds-WP_063278593.1;Parent=gene-CYJ02_RS11475;Dbxref=GenBank:WP_063278593.1;Name=WP_063278593.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=CYJ02_RS11475;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_063278593.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 1198 1668 . - . ID=gene-CYJ02_RS11480;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CYJ02_RS11480;old_locus_tag=CYJ02_11480 NZ_PJUQ01000034.1 Protein Homology CDS 1198 1668 . - 0 ID=cds-WP_014613398.1;Parent=gene-CYJ02_RS11480;Dbxref=GenBank:WP_014613398.1;Name=WP_014613398.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613398.1;locus_tag=CYJ02_RS11480;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_014613398.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 1647 2303 . - . ID=gene-CYJ02_RS11485;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11485;old_locus_tag=CYJ02_11485 NZ_PJUQ01000034.1 Protein Homology CDS 1647 2303 . - 0 ID=cds-WP_063278594.1;Parent=gene-CYJ02_RS11485;Dbxref=GenBank:WP_063278594.1;Name=WP_063278594.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729420.1;locus_tag=CYJ02_RS11485;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_063278594.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 2284 2742 . - . ID=gene-CYJ02_RS11490;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CYJ02_RS11490;old_locus_tag=CYJ02_11490 NZ_PJUQ01000034.1 Protein Homology CDS 2284 2742 . - 0 ID=cds-WP_014613396.1;Parent=gene-CYJ02_RS11490;Dbxref=GenBank:WP_014613396.1;Name=WP_014613396.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167544.1;locus_tag=CYJ02_RS11490;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014613396.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 3286 4974 . + . ID=gene-CYJ02_RS11495;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11495;old_locus_tag=CYJ02_11495 NZ_PJUQ01000034.1 Protein Homology CDS 3286 4974 . + 0 ID=cds-WP_014613395.1;Parent=gene-CYJ02_RS11495;Dbxref=GenBank:WP_014613395.1;Name=WP_014613395.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=CYJ02_RS11495;product=dihydroxy-acid dehydratase;protein_id=WP_014613395.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 4995 6749 . + . ID=gene-CYJ02_RS11500;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11500;old_locus_tag=CYJ02_11500 NZ_PJUQ01000034.1 Protein Homology CDS 4995 6749 . + 0 ID=cds-WP_063278595.1;Parent=gene-CYJ02_RS11500;Dbxref=GenBank:WP_063278595.1;Name=WP_063278595.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167542.1;locus_tag=CYJ02_RS11500;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_063278595.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 6746 7219 . + . ID=gene-CYJ02_RS11505;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CYJ02_RS11505;old_locus_tag=CYJ02_11505 NZ_PJUQ01000034.1 Protein Homology CDS 6746 7219 . + 0 ID=cds-WP_014613393.1;Parent=gene-CYJ02_RS11505;Dbxref=GenBank:WP_014613393.1;Name=WP_014613393.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=CYJ02_RS11505;product=acetolactate synthase small subunit;protein_id=WP_014613393.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 7254 8258 . + . ID=gene-CYJ02_RS11510;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11510;old_locus_tag=CYJ02_11510 NZ_PJUQ01000034.1 Protein Homology CDS 7254 8258 . + 0 ID=cds-WP_101431695.1;Parent=gene-CYJ02_RS11510;Dbxref=GenBank:WP_101431695.1;Name=WP_101431695.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=CYJ02_RS11510;product=ketol-acid reductoisomerase;protein_id=WP_101431695.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 8280 9812 . + . ID=gene-CYJ02_RS11515;Name=CYJ02_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11515;old_locus_tag=CYJ02_11515 NZ_PJUQ01000034.1 Protein Homology CDS 8280 9812 . + 0 ID=cds-WP_101431696.1;Parent=gene-CYJ02_RS11515;Dbxref=GenBank:WP_101431696.1;Name=WP_101431696.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167540.1;locus_tag=CYJ02_RS11515;product=2-isopropylmalate synthase;protein_id=WP_101431696.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 9809 10858 . + . ID=gene-CYJ02_RS11520;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11520;old_locus_tag=CYJ02_11520 NZ_PJUQ01000034.1 Protein Homology CDS 9809 10858 . + 0 ID=cds-WP_020219955.1;Parent=gene-CYJ02_RS11520;Dbxref=GenBank:WP_020219955.1;Name=WP_020219955.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=CYJ02_RS11520;product=3-isopropylmalate dehydrogenase;protein_id=WP_020219955.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 10862 12235 . + . ID=gene-CYJ02_RS11525;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11525;old_locus_tag=CYJ02_11525 NZ_PJUQ01000034.1 Protein Homology CDS 10862 12235 . + 0 ID=cds-WP_014613389.1;Parent=gene-CYJ02_RS11525;Dbxref=GenBank:WP_014613389.1;Name=WP_014613389.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613389.1;locus_tag=CYJ02_RS11525;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_014613389.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 12235 12807 . + . ID=gene-CYJ02_RS11530;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11530;old_locus_tag=CYJ02_11530 NZ_PJUQ01000034.1 Protein Homology CDS 12235 12807 . + 0 ID=cds-WP_014613388.1;Parent=gene-CYJ02_RS11530;Dbxref=GenBank:WP_014613388.1;Name=WP_014613388.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167537.1;locus_tag=CYJ02_RS11530;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_014613388.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 12820 14088 . + . ID=gene-CYJ02_RS11535;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11535;old_locus_tag=CYJ02_11535 NZ_PJUQ01000034.1 Protein Homology CDS 12820 14088 . + 0 ID=cds-WP_101431697.1;Parent=gene-CYJ02_RS11535;Dbxref=GenBank:WP_101431697.1;Name=WP_101431697.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CYJ02_RS11535;product=threonine ammonia-lyase IlvA;protein_id=WP_101431697.1;transl_table=11 NZ_PJUQ01000034.1 RefSeq gene 14158 15318 . - . ID=gene-CYJ02_RS11540;Name=CYJ02_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11540;old_locus_tag=CYJ02_11540 NZ_PJUQ01000034.1 Protein Homology CDS 14158 15318 . - 0 ID=cds-WP_333766509.1;Parent=gene-CYJ02_RS11540;Dbxref=GenBank:WP_333766509.1;Name=WP_333766509.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ02_RS11540;product=MFS transporter;protein_id=WP_333766509.1;transl_table=11 ##sequence-region NZ_PJUQ01000035.1 1 15908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000035.1 RefSeq region 1 15908 . + . ID=NZ_PJUQ01000035.1:1..15908;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000035.1 RefSeq gene 158 1750 . - . ID=gene-CYJ02_RS11545;Name=CYJ02_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11545;old_locus_tag=CYJ02_11545 NZ_PJUQ01000035.1 Protein Homology CDS 158 1750 . - 0 ID=cds-WP_014613317.1;Parent=gene-CYJ02_RS11545;Dbxref=GenBank:WP_014613317.1;Name=WP_014613317.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=CYJ02_RS11545;product=BCCT family transporter;protein_id=WP_014613317.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 1921 2784 . + . ID=gene-CYJ02_RS11550;Name=CYJ02_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11550;old_locus_tag=CYJ02_11550 NZ_PJUQ01000035.1 Protein Homology CDS 1921 2784 . + 0 ID=cds-WP_015729449.1;Parent=gene-CYJ02_RS11550;Dbxref=GenBank:WP_015729449.1;Name=WP_015729449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165785.1;locus_tag=CYJ02_RS11550;product=GNAT family N-acetyltransferase;protein_id=WP_015729449.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 3053 3592 . + . ID=gene-CYJ02_RS11555;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CYJ02_RS11555;old_locus_tag=CYJ02_11555 NZ_PJUQ01000035.1 Protein Homology CDS 3053 3592 . + 0 ID=cds-WP_015729447.1;Parent=gene-CYJ02_RS11555;Dbxref=GenBank:WP_015729447.1;Name=WP_015729447.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729447.1;locus_tag=CYJ02_RS11555;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_015729447.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 4003 5616 . + . ID=gene-CYJ02_RS11560;Name=CYJ02_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11560;old_locus_tag=CYJ02_11560 NZ_PJUQ01000035.1 Protein Homology CDS 4003 5616 . + 0 ID=cds-WP_014613321.1;Parent=gene-CYJ02_RS11560;Dbxref=GenBank:WP_014613321.1;Name=WP_014613321.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613321.1;locus_tag=CYJ02_RS11560;product=CTP synthase;protein_id=WP_014613321.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 6059 7417 . + . ID=gene-CYJ02_RS11565;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CYJ02_RS11565;old_locus_tag=CYJ02_11565 NZ_PJUQ01000035.1 Protein Homology CDS 6059 7417 . + 0 ID=cds-WP_014613322.1;Parent=gene-CYJ02_RS11565;Dbxref=GenBank:WP_014613322.1;Name=WP_014613322.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613322.1;locus_tag=CYJ02_RS11565;product=glycerol-3-phosphate transporter;protein_id=WP_014613322.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 7842 8366 . - . ID=gene-CYJ02_RS11570;Name=CYJ02_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11570;old_locus_tag=CYJ02_11570 NZ_PJUQ01000035.1 Protein Homology CDS 7842 8366 . - 0 ID=cds-WP_014613324.1;Parent=gene-CYJ02_RS11570;Dbxref=GenBank:WP_014613324.1;Name=WP_014613324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613324.1;locus_tag=CYJ02_RS11570;product=DUF2529 family protein;protein_id=WP_014613324.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 8631 9503 . + . ID=gene-CYJ02_RS11575;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11575;old_locus_tag=CYJ02_11575 NZ_PJUQ01000035.1 Protein Homology CDS 8631 9503 . + 0 ID=cds-WP_015729446.1;Parent=gene-CYJ02_RS11575;Dbxref=GenBank:WP_015729446.1;Name=WP_015729446.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=CYJ02_RS11575;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_015729446.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 9848 11113 . + . ID=gene-CYJ02_RS11580;Name=CYJ02_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11580;old_locus_tag=CYJ02_11580 NZ_PJUQ01000035.1 Protein Homology CDS 9848 11113 . + 0 ID=cds-WP_063284935.1;Parent=gene-CYJ02_RS11580;Dbxref=GenBank:WP_063284935.1;Name=WP_063284935.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=CYJ02_RS11580;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_063284935.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 11161 11490 . + . ID=gene-CYJ02_RS11585;Name=CYJ02_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11585;old_locus_tag=CYJ02_11585 NZ_PJUQ01000035.1 Protein Homology CDS 11161 11490 . + 0 ID=cds-WP_014613327.1;Parent=gene-CYJ02_RS11585;Dbxref=GenBank:WP_014613327.1;Name=WP_014613327.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613327.1;locus_tag=CYJ02_RS11585;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014613327.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 11671 13104 . + . ID=gene-CYJ02_RS11590;Name=CYJ02_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11590;old_locus_tag=CYJ02_11590 NZ_PJUQ01000035.1 Protein Homology CDS 11671 13104 . + 0 ID=cds-WP_099997352.1;Parent=gene-CYJ02_RS11590;Dbxref=GenBank:WP_099997352.1;Name=WP_099997352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165794.1;locus_tag=CYJ02_RS11590;product=aldehyde dehydrogenase family protein;protein_id=WP_099997352.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 13977 15290 . + . ID=gene-CYJ02_RS11600;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CYJ02_RS11600;old_locus_tag=CYJ02_11600 NZ_PJUQ01000035.1 Protein Homology CDS 13977 15290 . + 0 ID=cds-WP_014613330.1;Parent=gene-CYJ02_RS11600;Dbxref=GenBank:WP_014613330.1;Name=WP_014613330.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613330.1;locus_tag=CYJ02_RS11600;product=transcription termination factor Rho;protein_id=WP_014613330.1;transl_table=11 NZ_PJUQ01000035.1 RefSeq gene 15413 15667 . + . ID=gene-CYJ02_RS11605;Name=CYJ02_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11605;old_locus_tag=CYJ02_11605 NZ_PJUQ01000035.1 Protein Homology CDS 15413 15667 . + 0 ID=cds-WP_014613331.1;Parent=gene-CYJ02_RS11605;Dbxref=GenBank:WP_014613331.1;Name=WP_014613331.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=CYJ02_RS11605;product=type B 50S ribosomal protein L31;protein_id=WP_014613331.1;transl_table=11 ##sequence-region NZ_PJUQ01000036.1 1 9069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000036.1 RefSeq region 1 9069 . + . ID=NZ_PJUQ01000036.1:1..9069;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000036.1 RefSeq gene 126 202 . + . ID=gene-CYJ02_RS11610;Name=CYJ02_RS11610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11610;old_locus_tag=CYJ02_11610 NZ_PJUQ01000036.1 tRNAscan-SE tRNA 126 202 . + . ID=rna-CYJ02_RS11610;Parent=gene-CYJ02_RS11610;anticodon=(pos:160..162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11610;product=tRNA-Ile NZ_PJUQ01000036.1 tRNAscan-SE exon 126 202 . + . ID=exon-CYJ02_RS11610-1;Parent=rna-CYJ02_RS11610;anticodon=(pos:160..162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11610;product=tRNA-Ile NZ_PJUQ01000036.1 RefSeq gene 225 300 . + . ID=gene-CYJ02_RS11615;Name=CYJ02_RS11615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11615;old_locus_tag=CYJ02_11615 NZ_PJUQ01000036.1 tRNAscan-SE tRNA 225 300 . + . ID=rna-CYJ02_RS11615;Parent=gene-CYJ02_RS11615;anticodon=(pos:258..260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11615;product=tRNA-Ala NZ_PJUQ01000036.1 tRNAscan-SE exon 225 300 . + . ID=exon-CYJ02_RS11615-1;Parent=rna-CYJ02_RS11615;anticodon=(pos:258..260);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11615;product=tRNA-Ala NZ_PJUQ01000036.1 RefSeq gene 331 404 . + . ID=gene-CYJ02_RS11620;Name=CYJ02_RS11620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11620;old_locus_tag=CYJ02_11620 NZ_PJUQ01000036.1 tRNAscan-SE tRNA 331 404 . + . ID=rna-CYJ02_RS11620;Parent=gene-CYJ02_RS11620;anticodon=(pos:365..367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11620;product=tRNA-Met NZ_PJUQ01000036.1 tRNAscan-SE exon 331 404 . + . ID=exon-CYJ02_RS11620-1;Parent=rna-CYJ02_RS11620;anticodon=(pos:365..367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11620;product=tRNA-Met NZ_PJUQ01000036.1 RefSeq gene 430 503 . + . ID=gene-CYJ02_RS11625;Name=CYJ02_RS11625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11625;old_locus_tag=CYJ02_11625 NZ_PJUQ01000036.1 tRNAscan-SE tRNA 430 503 . + . ID=rna-CYJ02_RS11625;Parent=gene-CYJ02_RS11625;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11625;product=tRNA-Ile NZ_PJUQ01000036.1 tRNAscan-SE exon 430 503 . + . ID=exon-CYJ02_RS11625-1;Parent=rna-CYJ02_RS11625;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11625;product=tRNA-Ile NZ_PJUQ01000036.1 RefSeq gene 512 604 . + . ID=gene-CYJ02_RS11630;Name=CYJ02_RS11630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11630;old_locus_tag=CYJ02_11630 NZ_PJUQ01000036.1 tRNAscan-SE tRNA 512 604 . + . ID=rna-CYJ02_RS11630;Parent=gene-CYJ02_RS11630;anticodon=(pos:548..550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11630;product=tRNA-Ser NZ_PJUQ01000036.1 tRNAscan-SE exon 512 604 . + . ID=exon-CYJ02_RS11630-1;Parent=rna-CYJ02_RS11630;anticodon=(pos:548..550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11630;product=tRNA-Ser NZ_PJUQ01000036.1 RefSeq gene 919 2355 . + . ID=gene-CYJ02_RS11635;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=CYJ02_RS11635;old_locus_tag=CYJ02_11635 NZ_PJUQ01000036.1 Protein Homology CDS 919 2355 . + 0 ID=cds-WP_096636718.1;Parent=gene-CYJ02_RS11635;Dbxref=GenBank:WP_096636718.1;Name=WP_096636718.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614832.1;locus_tag=CYJ02_RS11635;product=PTS system trehalose-specific EIIBC component;protein_id=WP_096636718.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 2400 4031 . + . ID=gene-CYJ02_RS11640;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11640;old_locus_tag=CYJ02_11640 NZ_PJUQ01000036.1 Protein Homology CDS 2400 4031 . + 0 ID=cds-WP_014614831.1;Parent=gene-CYJ02_RS11640;Dbxref=GenBank:WP_014614831.1;Name=WP_014614831.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220085.1;locus_tag=CYJ02_RS11640;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_014614831.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 4053 4787 . + . ID=gene-CYJ02_RS11645;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CYJ02_RS11645;old_locus_tag=CYJ02_11645 NZ_PJUQ01000036.1 Protein Homology CDS 4053 4787 . + 0 ID=cds-WP_014614830.1;Parent=gene-CYJ02_RS11645;Dbxref=GenBank:WP_014614830.1;Name=WP_014614830.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166102.1;locus_tag=CYJ02_RS11645;product=trehalose operon repressor;protein_id=WP_014614830.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 4883 5152 . + . ID=gene-CYJ02_RS11650;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CYJ02_RS11650;old_locus_tag=CYJ02_11650 NZ_PJUQ01000036.1 cmsearch SRP_RNA 4883 5152 . + . ID=rna-CYJ02_RS11650;Parent=gene-CYJ02_RS11650;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11650;product=signal recognition particle sRNA large type NZ_PJUQ01000036.1 cmsearch exon 4883 5152 . + . ID=exon-CYJ02_RS11650-1;Parent=rna-CYJ02_RS11650;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11650;product=signal recognition particle sRNA large type NZ_PJUQ01000036.1 RefSeq gene 5254 5787 . + . ID=gene-CYJ02_RS11655;Name=CYJ02_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11655;old_locus_tag=CYJ02_11655 NZ_PJUQ01000036.1 Protein Homology CDS 5254 5787 . + 0 ID=cds-WP_101431698.1;Parent=gene-CYJ02_RS11655;Dbxref=GenBank:WP_101431698.1;Name=WP_101431698.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=CYJ02_RS11655;product=GNAT family N-acetyltransferase;protein_id=WP_101431698.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 5854 7557 . + . ID=gene-CYJ02_RS11660;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CYJ02_RS11660;old_locus_tag=CYJ02_11660 NZ_PJUQ01000036.1 Protein Homology CDS 5854 7557 . + 0 ID=cds-WP_014614828.1;Parent=gene-CYJ02_RS11660;Dbxref=GenBank:WP_014614828.1;Name=WP_014614828.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=CYJ02_RS11660;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014614828.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 7649 7969 . + . ID=gene-CYJ02_RS11665;Name=CYJ02_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11665;old_locus_tag=CYJ02_11665 NZ_PJUQ01000036.1 Protein Homology CDS 7649 7969 . + 0 ID=cds-WP_014614827.1;Parent=gene-CYJ02_RS11665;Dbxref=GenBank:WP_014614827.1;Name=WP_014614827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=CYJ02_RS11665;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_014614827.1;transl_table=11 NZ_PJUQ01000036.1 RefSeq gene 7971 8567 . + . ID=gene-CYJ02_RS11670;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CYJ02_RS11670;old_locus_tag=CYJ02_11670 NZ_PJUQ01000036.1 Protein Homology CDS 7971 8567 . + 0 ID=cds-WP_014614826.1;Parent=gene-CYJ02_RS11670;Dbxref=GenBank:WP_014614826.1;Name=WP_014614826.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CYJ02_RS11670;product=recombination mediator RecR;protein_id=WP_014614826.1;transl_table=11 ##sequence-region NZ_PJUQ01000037.1 1 1349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000037.1 RefSeq region 1 1349 . + . ID=NZ_PJUQ01000037.1:1..1349;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000037.1 RefSeq gene 1 1349 . - . ID=gene-CYJ02_RS12570;Name=CYJ02_RS12570;end_range=1349,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS12570;partial=true;start_range=.,1 NZ_PJUQ01000037.1 cmsearch rRNA 1 1349 . - . ID=rna-CYJ02_RS12570;Parent=gene-CYJ02_RS12570;Dbxref=RFAM:RF02541;end_range=1349,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12570;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000037.1 cmsearch exon 1 1349 . - . ID=exon-CYJ02_RS12570-1;Parent=rna-CYJ02_RS12570;Dbxref=RFAM:RF02541;end_range=1349,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12570;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PJUQ01000038.1 1 1313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000038.1 RefSeq region 1 1313 . + . ID=NZ_PJUQ01000038.1:1..1313;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000038.1 RefSeq gene 1 1294 . - . ID=gene-CYJ02_RS11680;Name=CYJ02_RS11680;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS11680;old_locus_tag=CYJ02_11680;partial=true;start_range=.,1 NZ_PJUQ01000038.1 cmsearch rRNA 1 1294 . - . ID=rna-CYJ02_RS11680;Parent=gene-CYJ02_RS11680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11680;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000038.1 cmsearch exon 1 1294 . - . ID=exon-CYJ02_RS11680-1;Parent=rna-CYJ02_RS11680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11680;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PJUQ01000039.1 1 6049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000039.1 RefSeq region 1 6049 . + . ID=NZ_PJUQ01000039.1:1..6049;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000039.1 RefSeq gene 141 2204 . - . ID=gene-CYJ02_RS11685;Name=CYJ02_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11685;old_locus_tag=CYJ02_11685 NZ_PJUQ01000039.1 Protein Homology CDS 141 2204 . - 0 ID=cds-WP_101431699.1;Parent=gene-CYJ02_RS11685;Dbxref=GenBank:WP_101431699.1;Name=WP_101431699.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF019850.7;locus_tag=CYJ02_RS11685;product=Mur ligase family protein;protein_id=WP_101431699.1;transl_table=11 NZ_PJUQ01000039.1 RefSeq gene 2269 2445 . + . ID=gene-CYJ02_RS12420;Name=CYJ02_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12420 NZ_PJUQ01000039.1 GeneMarkS-2+ CDS 2269 2445 . + 0 ID=cds-WP_154800926.1;Parent=gene-CYJ02_RS12420;Dbxref=GenBank:WP_154800926.1;Name=WP_154800926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12420;product=hypothetical protein;protein_id=WP_154800926.1;transl_table=11 NZ_PJUQ01000039.1 RefSeq gene 2438 4057 . - . ID=gene-CYJ02_RS11690;Name=CYJ02_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11690;old_locus_tag=CYJ02_11690 NZ_PJUQ01000039.1 Protein Homology CDS 2438 4057 . - 0 ID=cds-WP_065354690.1;Parent=gene-CYJ02_RS11690;Dbxref=GenBank:WP_065354690.1;Name=WP_065354690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830362.1;locus_tag=CYJ02_RS11690;product=poly(glycerol-phosphate) alpha-glucosyltransferase;protein_id=WP_065354690.1;transl_table=11 NZ_PJUQ01000039.1 RefSeq pseudogene 4135 4218 . - . ID=gene-CYJ02_RS13120;Name=CYJ02_RS13120;end_range=4218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13120;partial=true;pseudo=true NZ_PJUQ01000039.1 Protein Homology CDS 4135 4218 . - 0 ID=cds-CYJ02_RS13120;Parent=gene-CYJ02_RS13120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009986;end_range=4218,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=CYJ02_RS13120;partial=true;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11 NZ_PJUQ01000039.1 RefSeq gene 4236 6049 . - . ID=gene-CYJ02_RS11695;Name=CYJ02_RS11695;end_range=6049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11695;old_locus_tag=CYJ02_11695;partial=true NZ_PJUQ01000039.1 GeneMarkS-2+ CDS 4236 6049 . - 2 ID=cds-WP_206747226.1;Parent=gene-CYJ02_RS11695;Dbxref=GenBank:WP_206747226.1;Name=WP_206747226.1;end_range=6049,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11695;partial=true;product=hypothetical protein;protein_id=WP_206747226.1;transl_table=11 ##sequence-region NZ_PJUQ01000004.1 1 149759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000004.1 RefSeq region 1 149759 . + . ID=NZ_PJUQ01000004.1:1..149759;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000004.1 RefSeq gene 108 1448 . - . ID=gene-CYJ02_RS02960;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02960;old_locus_tag=CYJ02_02960 NZ_PJUQ01000004.1 Protein Homology CDS 108 1448 . - 0 ID=cds-WP_014614019.1;Parent=gene-CYJ02_RS02960;Dbxref=GenBank:WP_014614019.1;Name=WP_014614019.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=CYJ02_RS02960;product=type I glutamate--ammonia ligase;protein_id=WP_014614019.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 1472 1840 . - . ID=gene-CYJ02_RS02965;Name=CYJ02_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02965;old_locus_tag=CYJ02_02965 NZ_PJUQ01000004.1 Protein Homology CDS 1472 1840 . - 0 ID=cds-WP_014614020.1;Parent=gene-CYJ02_RS02965;Dbxref=GenBank:WP_014614020.1;Name=WP_014614020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424965.1;locus_tag=CYJ02_RS02965;product=MerR family transcriptional regulator;protein_id=WP_014614020.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 2016 3263 . - . ID=gene-CYJ02_RS02970;Name=CYJ02_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02970;old_locus_tag=CYJ02_02970 NZ_PJUQ01000004.1 Protein Homology CDS 2016 3263 . - 0 ID=cds-WP_014614021.1;Parent=gene-CYJ02_RS02970;Dbxref=GenBank:WP_014614021.1;Name=WP_014614021.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614021.1;locus_tag=CYJ02_RS02970;product=methionine gamma-lyase family protein;protein_id=WP_014614021.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 3281 4513 . - . ID=gene-CYJ02_RS02975;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CYJ02_RS02975;old_locus_tag=CYJ02_02975 NZ_PJUQ01000004.1 Protein Homology CDS 3281 4513 . - 0 ID=cds-WP_101431355.1;Parent=gene-CYJ02_RS02975;Dbxref=GenBank:WP_101431355.1;Name=WP_101431355.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165422.1;locus_tag=CYJ02_RS02975;product=GTPase HflX;protein_id=WP_101431355.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 4619 5092 . + . ID=gene-CYJ02_RS02980;Name=CYJ02_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02980;old_locus_tag=CYJ02_02980 NZ_PJUQ01000004.1 Protein Homology CDS 4619 5092 . + 0 ID=cds-WP_014614023.1;Parent=gene-CYJ02_RS02980;Dbxref=GenBank:WP_014614023.1;Name=WP_014614023.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=CYJ02_RS02980;product=glutathione peroxidase;protein_id=WP_014614023.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 5850 6803 . + . ID=gene-CYJ02_RS02985;Name=CYJ02_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS02985;old_locus_tag=CYJ02_02985 NZ_PJUQ01000004.1 Protein Homology CDS 5850 6803 . + 0 ID=cds-WP_101431356.1;Parent=gene-CYJ02_RS02985;Dbxref=GenBank:WP_101431356.1;Name=WP_101431356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=CYJ02_RS02985;product=alpha/beta hydrolase;protein_id=WP_101431356.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 6790 7746 . + . ID=gene-CYJ02_RS02990;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS02990;old_locus_tag=CYJ02_02990 NZ_PJUQ01000004.1 Protein Homology CDS 6790 7746 . + 0 ID=cds-WP_101431357.1;Parent=gene-CYJ02_RS02990;Dbxref=GenBank:WP_101431357.1;Name=WP_101431357.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167781.1;locus_tag=CYJ02_RS02990;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_101431357.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 7739 7945 . + . ID=gene-CYJ02_RS02995;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CYJ02_RS02995;old_locus_tag=CYJ02_02995 NZ_PJUQ01000004.1 Protein Homology CDS 7739 7945 . + 0 ID=cds-WP_014614028.1;Parent=gene-CYJ02_RS02995;Dbxref=GenBank:WP_014614028.1;Name=WP_014614028.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=CYJ02_RS02995;product=RNA chaperone Hfq;protein_id=WP_014614028.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 8238 9908 . - . ID=gene-CYJ02_RS03000;Name=CYJ02_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03000;old_locus_tag=CYJ02_03000 NZ_PJUQ01000004.1 Protein Homology CDS 8238 9908 . - 0 ID=cds-WP_015729065.1;Parent=gene-CYJ02_RS03000;Dbxref=GenBank:WP_015729065.1;Name=WP_015729065.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614029.1;locus_tag=CYJ02_RS03000;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_015729065.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 10035 11537 . - . ID=gene-CYJ02_RS03005;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CYJ02_RS03005;old_locus_tag=CYJ02_03005 NZ_PJUQ01000004.1 Protein Homology CDS 10035 11537 . - 0 ID=cds-WP_070407552.1;Parent=gene-CYJ02_RS03005;Dbxref=GenBank:WP_070407552.1;Name=WP_070407552.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165429.1;locus_tag=CYJ02_RS03005;product=glycerol kinase GlpK;protein_id=WP_070407552.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 11833 12648 . - . ID=gene-CYJ02_RS03010;Name=CYJ02_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03010;old_locus_tag=CYJ02_03010 NZ_PJUQ01000004.1 Protein Homology CDS 11833 12648 . - 0 ID=cds-WP_014614031.1;Parent=gene-CYJ02_RS03010;Dbxref=GenBank:WP_014614031.1;Name=WP_014614031.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=CYJ02_RS03010;product=MIP/aquaporin family protein;protein_id=WP_014614031.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 12887 13915 . - . ID=gene-CYJ02_RS03015;Name=CYJ02_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03015;old_locus_tag=CYJ02_03015 NZ_PJUQ01000004.1 Protein Homology CDS 12887 13915 . - 0 ID=cds-WP_063284346.1;Parent=gene-CYJ02_RS03015;Dbxref=GenBank:WP_063284346.1;Name=WP_063284346.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729064.1;locus_tag=CYJ02_RS03015;product=S66 family peptidase;protein_id=WP_063284346.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 13943 14476 . - . ID=gene-CYJ02_RS03020;Name=CYJ02_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03020;old_locus_tag=CYJ02_03020 NZ_PJUQ01000004.1 Protein Homology CDS 13943 14476 . - 0 ID=cds-WP_015729063.1;Parent=gene-CYJ02_RS03020;Dbxref=GenBank:WP_015729063.1;Name=WP_015729063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165432.1;locus_tag=CYJ02_RS03020;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_015729063.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 14488 16428 . - . ID=gene-CYJ02_RS03025;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CYJ02_RS03025;old_locus_tag=CYJ02_03025 NZ_PJUQ01000004.1 Protein Homology CDS 14488 16428 . - 0 ID=cds-WP_101431358.1;Parent=gene-CYJ02_RS03025;Dbxref=GenBank:WP_101431358.1;Name=WP_101431358.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729062.1;locus_tag=CYJ02_RS03025;product=DNA mismatch repair endonuclease MutL;protein_id=WP_101431358.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 16443 19040 . - . ID=gene-CYJ02_RS03030;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03030;old_locus_tag=CYJ02_03030 NZ_PJUQ01000004.1 Protein Homology CDS 16443 19040 . - 0 ID=cds-WP_101431359.1;Parent=gene-CYJ02_RS03030;Dbxref=GenBank:WP_101431359.1;Name=WP_101431359.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=CYJ02_RS03030;product=DNA mismatch repair protein MutS;protein_id=WP_101431359.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 19697 20206 . - . ID=gene-CYJ02_RS03035;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CYJ02_RS03035;old_locus_tag=CYJ02_03035 NZ_PJUQ01000004.1 Protein Homology CDS 19697 20206 . - 0 ID=cds-WP_014614036.1;Parent=gene-CYJ02_RS03035;Dbxref=GenBank:WP_014614036.1;Name=WP_014614036.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614036.1;locus_tag=CYJ02_RS03035;product=energy coupling factor transporter S component ThiW;protein_id=WP_014614036.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 20261 20638 . - . ID=gene-CYJ02_RS03040;Name=CYJ02_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03040;old_locus_tag=CYJ02_03040 NZ_PJUQ01000004.1 Protein Homology CDS 20261 20638 . - 0 ID=cds-WP_101431360.1;Parent=gene-CYJ02_RS03040;Dbxref=GenBank:WP_101431360.1;Name=WP_101431360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=CYJ02_RS03040;product=YlbF family regulator;protein_id=WP_101431360.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 20639 22189 . - . ID=gene-CYJ02_RS03045;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03045;old_locus_tag=CYJ02_03045 NZ_PJUQ01000004.1 Protein Homology CDS 20639 22189 . - 0 ID=cds-WP_101431361.1;Parent=gene-CYJ02_RS03045;Dbxref=GenBank:WP_101431361.1;Name=WP_101431361.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=CYJ02_RS03045;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_101431361.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 22293 22592 . - . ID=gene-CYJ02_RS03050;Name=CYJ02_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03050;old_locus_tag=CYJ02_03050 NZ_PJUQ01000004.1 Protein Homology CDS 22293 22592 . - 0 ID=cds-WP_014614039.1;Parent=gene-CYJ02_RS03050;Dbxref=GenBank:WP_014614039.1;Name=WP_014614039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729060.1;locus_tag=CYJ02_RS03050;product=thiamine-binding protein;protein_id=WP_014614039.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 22851 23717 . - . ID=gene-CYJ02_RS03055;Name=CYJ02_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03055;old_locus_tag=CYJ02_03055 NZ_PJUQ01000004.1 Protein Homology CDS 22851 23717 . - 0 ID=cds-WP_014614040.1;Parent=gene-CYJ02_RS03055;Dbxref=GenBank:WP_014614040.1;Name=WP_014614040.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=CYJ02_RS03055;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_014614040.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 23718 25478 . - . ID=gene-CYJ02_RS03060;Name=CYJ02_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03060;old_locus_tag=CYJ02_03060 NZ_PJUQ01000004.1 Protein Homology CDS 23718 25478 . - 0 ID=cds-WP_101431362.1;Parent=gene-CYJ02_RS03060;Dbxref=GenBank:WP_101431362.1;Name=WP_101431362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=CYJ02_RS03060;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_101431362.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 25629 26423 . - . ID=gene-CYJ02_RS03065;Name=CYJ02_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03065;old_locus_tag=CYJ02_03065 NZ_PJUQ01000004.1 Protein Homology CDS 25629 26423 . - 0 ID=cds-WP_014614042.1;Parent=gene-CYJ02_RS03065;Dbxref=GenBank:WP_014614042.1;Name=WP_014614042.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167795.1;locus_tag=CYJ02_RS03065;product=TIGR00282 family metallophosphoesterase;protein_id=WP_014614042.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 26754 28928 . - . ID=gene-CYJ02_RS03070;Name=CYJ02_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03070;old_locus_tag=CYJ02_03070 NZ_PJUQ01000004.1 Protein Homology CDS 26754 28928 . - 0 ID=cds-WP_101431363.1;Parent=gene-CYJ02_RS03070;Dbxref=GenBank:WP_101431363.1;Name=WP_101431363.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=CYJ02_RS03070;product=heavy metal translocating P-type ATPase;protein_id=WP_101431363.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 28912 29292 . - . ID=gene-CYJ02_RS03075;Name=CYJ02_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03075;old_locus_tag=CYJ02_03075 NZ_PJUQ01000004.1 Protein Homology CDS 28912 29292 . - 0 ID=cds-WP_101431364.1;Parent=gene-CYJ02_RS03075;Dbxref=GenBank:WP_101431364.1;Name=WP_101431364.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=CYJ02_RS03075;product=ArsR/SmtB family transcription factor;protein_id=WP_101431364.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 29490 29708 . + . ID=gene-CYJ02_RS03080;Name=CYJ02_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03080;old_locus_tag=CYJ02_03080 NZ_PJUQ01000004.1 Protein Homology CDS 29490 29708 . + 0 ID=cds-WP_014614046.1;Parent=gene-CYJ02_RS03080;Dbxref=GenBank:WP_014614046.1;Name=WP_014614046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165444.1;locus_tag=CYJ02_RS03080;product=hypothetical protein;protein_id=WP_014614046.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 29831 31390 . - . ID=gene-CYJ02_RS03085;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CYJ02_RS03085;old_locus_tag=CYJ02_03085 NZ_PJUQ01000004.1 Protein Homology CDS 29831 31390 . - 0 ID=cds-WP_014614047.1;Parent=gene-CYJ02_RS03085;Dbxref=GenBank:WP_014614047.1;Name=WP_014614047.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CYJ02_RS03085;product=ribonuclease Y;protein_id=WP_014614047.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 31617 32660 . - . ID=gene-CYJ02_RS03090;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03090;old_locus_tag=CYJ02_03090 NZ_PJUQ01000004.1 Protein Homology CDS 31617 32660 . - 0 ID=cds-WP_014614049.1;Parent=gene-CYJ02_RS03090;Dbxref=GenBank:WP_014614049.1;Name=WP_014614049.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=CYJ02_RS03090;product=recombinase RecA;protein_id=WP_014614049.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 32799 33974 . - . ID=gene-CYJ02_RS03095;Name=CYJ02_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03095;old_locus_tag=CYJ02_03095 NZ_PJUQ01000004.1 Protein Homology CDS 32799 33974 . - 0 ID=cds-WP_101431365.1;Parent=gene-CYJ02_RS03095;Dbxref=GenBank:WP_101431365.1;Name=WP_101431365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165447.1;locus_tag=CYJ02_RS03095;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_101431365.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 34195 34779 . - . ID=gene-CYJ02_RS03100;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03100;old_locus_tag=CYJ02_03100 NZ_PJUQ01000004.1 Protein Homology CDS 34195 34779 . - 0 ID=cds-WP_101431366.1;Parent=gene-CYJ02_RS03100;Dbxref=GenBank:WP_101431366.1;Name=WP_101431366.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=CYJ02_RS03100;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_101431366.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 34821 35216 . - . ID=gene-CYJ02_RS03105;Name=CYJ02_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03105;old_locus_tag=CYJ02_03105 NZ_PJUQ01000004.1 Protein Homology CDS 34821 35216 . - 0 ID=cds-WP_014614052.1;Parent=gene-CYJ02_RS03105;Dbxref=GenBank:WP_014614052.1;Name=WP_014614052.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167802.1;locus_tag=CYJ02_RS03105;product=helix-turn-helix domain-containing protein;protein_id=WP_014614052.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 35235 36080 . - . ID=gene-CYJ02_RS03110;Name=CYJ02_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03110;old_locus_tag=CYJ02_03110 NZ_PJUQ01000004.1 Protein Homology CDS 35235 36080 . - 0 ID=cds-WP_096535762.1;Parent=gene-CYJ02_RS03110;Dbxref=GenBank:WP_096535762.1;Name=WP_096535762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165450.1;locus_tag=CYJ02_RS03110;product=DUF3388 domain-containing protein;protein_id=WP_096535762.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 36137 36841 . - . ID=gene-CYJ02_RS03115;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=CYJ02_RS03115;old_locus_tag=CYJ02_03115 NZ_PJUQ01000004.1 Protein Homology CDS 36137 36841 . - 0 ID=cds-WP_099991934.1;Parent=gene-CYJ02_RS03115;Dbxref=GenBank:WP_099991934.1;Name=WP_099991934.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165451.1;locus_tag=CYJ02_RS03115;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_099991934.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 36838 38127 . - . ID=gene-CYJ02_RS03120;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=CYJ02_RS03120;old_locus_tag=CYJ02_03120 NZ_PJUQ01000004.1 Protein Homology CDS 36838 38127 . - 0 ID=cds-WP_014614055.1;Parent=gene-CYJ02_RS03120;Dbxref=GenBank:WP_014614055.1;Name=WP_014614055.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614055.1;locus_tag=CYJ02_RS03120;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_014614055.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 38120 39394 . - . ID=gene-CYJ02_RS03125;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=CYJ02_RS03125;old_locus_tag=CYJ02_03125 NZ_PJUQ01000004.1 Protein Homology CDS 38120 39394 . - 0 ID=cds-WP_096533536.1;Parent=gene-CYJ02_RS03125;Dbxref=GenBank:WP_096533536.1;Name=WP_096533536.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=CYJ02_RS03125;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_096533536.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 39428 40144 . - . ID=gene-CYJ02_RS03130;Name=CYJ02_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03130;old_locus_tag=CYJ02_03130 NZ_PJUQ01000004.1 Protein Homology CDS 39428 40144 . - 0 ID=cds-WP_014614057.1;Parent=gene-CYJ02_RS03130;Dbxref=GenBank:WP_014614057.1;Name=WP_014614057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=CYJ02_RS03130;product=GntR family transcriptional regulator;protein_id=WP_014614057.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 40150 42513 . - . ID=gene-CYJ02_RS03135;Name=CYJ02_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03135;old_locus_tag=CYJ02_03135 NZ_PJUQ01000004.1 Protein Homology CDS 40150 42513 . - 0 ID=cds-WP_015729054.1;Parent=gene-CYJ02_RS03135;Dbxref=GenBank:WP_015729054.1;Name=WP_015729054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729054.1;locus_tag=CYJ02_RS03135;product=DNA translocase FtsK;protein_id=WP_015729054.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 42652 44325 . - . ID=gene-CYJ02_RS03140;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03140;old_locus_tag=CYJ02_03140 NZ_PJUQ01000004.1 Protein Homology CDS 42652 44325 . - 0 ID=cds-WP_014614059.1;Parent=gene-CYJ02_RS03140;Dbxref=GenBank:WP_014614059.1;Name=WP_014614059.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CYJ02_RS03140;product=ribonuclease J2;protein_id=WP_014614059.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 44835 46928 . - . ID=gene-CYJ02_RS03150;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CYJ02_RS03150;old_locus_tag=CYJ02_03150 NZ_PJUQ01000004.1 Protein Homology CDS 44835 46928 . - 0 ID=cds-WP_101431367.1;Parent=gene-CYJ02_RS03150;Dbxref=GenBank:WP_101431367.1;Name=WP_101431367.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614061.1;locus_tag=CYJ02_RS03150;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_101431367.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 47087 47356 . - . ID=gene-CYJ02_RS03155;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CYJ02_RS03155;old_locus_tag=CYJ02_03155 NZ_PJUQ01000004.1 Protein Homology CDS 47087 47356 . - 0 ID=cds-WP_014614062.1;Parent=gene-CYJ02_RS03155;Dbxref=GenBank:WP_014614062.1;Name=WP_014614062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CYJ02_RS03155;product=30S ribosomal protein S15;protein_id=WP_014614062.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 47457 48428 . - . ID=gene-CYJ02_RS03160;Name=CYJ02_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03160;old_locus_tag=CYJ02_03160 NZ_PJUQ01000004.1 Protein Homology CDS 47457 48428 . - 0 ID=cds-WP_101431368.1;Parent=gene-CYJ02_RS03160;Dbxref=GenBank:WP_101431368.1;Name=WP_101431368.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476021.1;locus_tag=CYJ02_RS03160;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_101431368.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 48443 49360 . - . ID=gene-CYJ02_RS03165;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03165;old_locus_tag=CYJ02_03165 NZ_PJUQ01000004.1 Protein Homology CDS 48443 49360 . - 0 ID=cds-WP_014614064.1;Parent=gene-CYJ02_RS03165;Dbxref=GenBank:WP_014614064.1;Name=WP_014614064.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=CYJ02_RS03165;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014614064.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 49445 49789 . - . ID=gene-CYJ02_RS03170;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03170;old_locus_tag=CYJ02_03170 NZ_PJUQ01000004.1 Protein Homology CDS 49445 49789 . - 0 ID=cds-WP_014614065.1;Parent=gene-CYJ02_RS03170;Dbxref=GenBank:WP_014614065.1;Name=WP_014614065.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=CYJ02_RS03170;product=30S ribosome-binding factor RbfA;protein_id=WP_014614065.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 50534 50773 . - . ID=gene-CYJ02_RS03175;Name=CYJ02_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03175;old_locus_tag=CYJ02_03175 NZ_PJUQ01000004.1 Protein Homology CDS 50534 50773 . - 0 ID=cds-WP_014614066.1;Parent=gene-CYJ02_RS03175;Dbxref=GenBank:WP_014614066.1;Name=WP_014614066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614066.1;locus_tag=CYJ02_RS03175;product=hypothetical protein;protein_id=WP_014614066.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 50988 53126 . - . ID=gene-CYJ02_RS03180;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03180;old_locus_tag=CYJ02_03180 NZ_PJUQ01000004.1 Protein Homology CDS 50988 53126 . - 0 ID=cds-WP_015729051.1;Parent=gene-CYJ02_RS03180;Dbxref=GenBank:WP_015729051.1;Name=WP_015729051.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=CYJ02_RS03180;product=translation initiation factor IF-2;protein_id=WP_015729051.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 53143 53448 . - . ID=gene-CYJ02_RS03185;Name=CYJ02_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03185;old_locus_tag=CYJ02_03185 NZ_PJUQ01000004.1 Protein Homology CDS 53143 53448 . - 0 ID=cds-WP_014614068.1;Parent=gene-CYJ02_RS03185;Dbxref=GenBank:WP_014614068.1;Name=WP_014614068.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=CYJ02_RS03185;product=YlxQ family RNA-binding protein;protein_id=WP_014614068.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 53445 53732 . - . ID=gene-CYJ02_RS03190;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=CYJ02_RS03190;old_locus_tag=CYJ02_03190 NZ_PJUQ01000004.1 Protein Homology CDS 53445 53732 . - 0 ID=cds-WP_014614069.1;Parent=gene-CYJ02_RS03190;Dbxref=GenBank:WP_014614069.1;Name=WP_014614069.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=CYJ02_RS03190;product=RNase P modulator RnpM;protein_id=WP_014614069.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 53744 54922 . - . ID=gene-CYJ02_RS03195;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03195;old_locus_tag=CYJ02_03195 NZ_PJUQ01000004.1 Protein Homology CDS 53744 54922 . - 0 ID=cds-WP_101431369.1;Parent=gene-CYJ02_RS03195;Dbxref=GenBank:WP_101431369.1;Name=WP_101431369.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729050.1;locus_tag=CYJ02_RS03195;product=transcription termination factor NusA;protein_id=WP_101431369.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 54943 55410 . - . ID=gene-CYJ02_RS03200;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CYJ02_RS03200;old_locus_tag=CYJ02_03200 NZ_PJUQ01000004.1 Protein Homology CDS 54943 55410 . - 0 ID=cds-WP_014614071.1;Parent=gene-CYJ02_RS03200;Dbxref=GenBank:WP_014614071.1;Name=WP_014614071.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=CYJ02_RS03200;product=ribosome maturation factor RimP;protein_id=WP_014614071.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 55535 59842 . - . ID=gene-CYJ02_RS03205;Name=CYJ02_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03205;old_locus_tag=CYJ02_03205 NZ_PJUQ01000004.1 Protein Homology CDS 55535 59842 . - 0 ID=cds-WP_014614072.1;Parent=gene-CYJ02_RS03205;Dbxref=GenBank:WP_014614072.1;Name=WP_014614072.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729049.1;locus_tag=CYJ02_RS03205;product=PolC-type DNA polymerase III;protein_id=WP_014614072.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 60759 62462 . - . ID=gene-CYJ02_RS03210;Name=CYJ02_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03210;old_locus_tag=CYJ02_03210 NZ_PJUQ01000004.1 Protein Homology CDS 60759 62462 . - 0 ID=cds-WP_014614074.1;Parent=gene-CYJ02_RS03210;Dbxref=GenBank:WP_014614074.1;Name=WP_014614074.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275937.1;locus_tag=CYJ02_RS03210;product=proline--tRNA ligase;protein_id=WP_014614074.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 62487 63767 . - . ID=gene-CYJ02_RS03215;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CYJ02_RS03215;old_locus_tag=CYJ02_03215 NZ_PJUQ01000004.1 Protein Homology CDS 62487 63767 . - 0 ID=cds-WP_015729046.1;Parent=gene-CYJ02_RS03215;Dbxref=GenBank:WP_015729046.1;Name=WP_015729046.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=CYJ02_RS03215;product=RIP metalloprotease RseP;protein_id=WP_015729046.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 63774 64904 . - . ID=gene-CYJ02_RS03220;Name=CYJ02_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03220;old_locus_tag=CYJ02_03220 NZ_PJUQ01000004.1 Protein Homology CDS 63774 64904 . - 0 ID=cds-WP_133121709.1;Parent=gene-CYJ02_RS03220;Dbxref=GenBank:WP_133121709.1;Name=WP_133121709.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016910764.1;locus_tag=CYJ02_RS03220;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_133121709.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 64921 65703 . - . ID=gene-CYJ02_RS03225;Name=CYJ02_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03225;old_locus_tag=CYJ02_03225 NZ_PJUQ01000004.1 Protein Homology CDS 64921 65703 . - 0 ID=cds-WP_101431371.1;Parent=gene-CYJ02_RS03225;Dbxref=GenBank:WP_101431371.1;Name=WP_101431371.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=CYJ02_RS03225;product=phosphatidate cytidylyltransferase;protein_id=WP_101431371.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 65718 66479 . - . ID=gene-CYJ02_RS03230;Name=CYJ02_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03230;old_locus_tag=CYJ02_03230 NZ_PJUQ01000004.1 Protein Homology CDS 65718 66479 . - 0 ID=cds-WP_065520517.1;Parent=gene-CYJ02_RS03230;Dbxref=GenBank:WP_065520517.1;Name=WP_065520517.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=CYJ02_RS03230;product=isoprenyl transferase;protein_id=WP_065520517.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 66723 67277 . - . ID=gene-CYJ02_RS03235;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CYJ02_RS03235;old_locus_tag=CYJ02_03235 NZ_PJUQ01000004.1 Protein Homology CDS 66723 67277 . - 0 ID=cds-WP_014614079.1;Parent=gene-CYJ02_RS03235;Dbxref=GenBank:WP_014614079.1;Name=WP_014614079.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CYJ02_RS03235;product=ribosome recycling factor;protein_id=WP_014614079.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 67295 68017 . - . ID=gene-CYJ02_RS03240;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CYJ02_RS03240;old_locus_tag=CYJ02_03240 NZ_PJUQ01000004.1 Protein Homology CDS 67295 68017 . - 0 ID=cds-WP_014614080.1;Parent=gene-CYJ02_RS03240;Dbxref=GenBank:WP_014614080.1;Name=WP_014614080.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CYJ02_RS03240;product=UMP kinase;protein_id=WP_014614080.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 68169 69047 . - . ID=gene-CYJ02_RS03245;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CYJ02_RS03245;old_locus_tag=CYJ02_03245 NZ_PJUQ01000004.1 Protein Homology CDS 68169 69047 . - 0 ID=cds-WP_014614081.1;Parent=gene-CYJ02_RS03245;Dbxref=GenBank:WP_014614081.1;Name=WP_014614081.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CYJ02_RS03245;product=translation elongation factor Ts;protein_id=WP_014614081.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 69137 69934 . - . ID=gene-CYJ02_RS03250;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03250;old_locus_tag=CYJ02_03250 NZ_PJUQ01000004.1 Protein Homology CDS 69137 69934 . - 0 ID=cds-WP_014614082.1;Parent=gene-CYJ02_RS03250;Dbxref=GenBank:WP_014614082.1;Name=WP_014614082.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=CYJ02_RS03250;product=30S ribosomal protein S2;protein_id=WP_014614082.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 70101 70874 . - . ID=gene-CYJ02_RS03255;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=CYJ02_RS03255;old_locus_tag=CYJ02_03255 NZ_PJUQ01000004.1 Protein Homology CDS 70101 70874 . - 0 ID=cds-WP_014614083.1;Parent=gene-CYJ02_RS03255;Dbxref=GenBank:WP_014614083.1;Name=WP_014614083.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=CYJ02_RS03255;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_014614083.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 70894 72303 . - . ID=gene-CYJ02_RS03260;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CYJ02_RS03260;old_locus_tag=CYJ02_03260 NZ_PJUQ01000004.1 Protein Homology CDS 70894 72303 . - 0 ID=cds-WP_101431372.1;Parent=gene-CYJ02_RS03260;Dbxref=GenBank:WP_101431372.1;Name=WP_101431372.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275946.1;locus_tag=CYJ02_RS03260;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_101431372.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 72318 72860 . - . ID=gene-CYJ02_RS03265;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CYJ02_RS03265;old_locus_tag=CYJ02_03265 NZ_PJUQ01000004.1 Protein Homology CDS 72318 72860 . - 0 ID=cds-WP_014614085.1;Parent=gene-CYJ02_RS03265;Dbxref=GenBank:WP_014614085.1;Name=WP_014614085.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=CYJ02_RS03265;product=ATP-dependent protease subunit HslV;protein_id=WP_014614085.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 72867 73727 . - . ID=gene-CYJ02_RS03270;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CYJ02_RS03270;old_locus_tag=CYJ02_03270 NZ_PJUQ01000004.1 Protein Homology CDS 72867 73727 . - 0 ID=cds-WP_373408322.1;Parent=gene-CYJ02_RS03270;Dbxref=GenBank:WP_373408322.1;Name=WP_373408322.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453085.1;locus_tag=CYJ02_RS03270;product=tyrosine recombinase XerC;protein_id=WP_373408322.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 73877 75181 . - . ID=gene-CYJ02_RS03275;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CYJ02_RS03275;old_locus_tag=CYJ02_03275 NZ_PJUQ01000004.1 Protein Homology CDS 73877 75181 . - 0 ID=cds-WP_101431374.1;Parent=gene-CYJ02_RS03275;Dbxref=GenBank:WP_101431374.1;Name=WP_101431374.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=CYJ02_RS03275;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_101431374.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 75209 77278 . - . ID=gene-CYJ02_RS03280;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03280;old_locus_tag=CYJ02_03280 NZ_PJUQ01000004.1 Protein Homology CDS 75209 77278 . - 0 ID=cds-WP_014614088.1;Parent=gene-CYJ02_RS03280;Dbxref=GenBank:WP_014614088.1;Name=WP_014614088.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CYJ02_RS03280;product=type I DNA topoisomerase;protein_id=WP_014614088.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 77362 78249 . - . ID=gene-CYJ02_RS03285;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03285;old_locus_tag=CYJ02_03285 NZ_PJUQ01000004.1 Protein Homology CDS 77362 78249 . - 0 ID=cds-WP_100006559.1;Parent=gene-CYJ02_RS03285;Dbxref=GenBank:WP_100006559.1;Name=WP_100006559.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614089.1;locus_tag=CYJ02_RS03285;product=DNA-processing protein DprA;protein_id=WP_100006559.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 78488 79393 . - . ID=gene-CYJ02_RS03290;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CYJ02_RS03290;old_locus_tag=CYJ02_03290 NZ_PJUQ01000004.1 Protein Homology CDS 78488 79393 . - 0 ID=cds-WP_014614090.1;Parent=gene-CYJ02_RS03290;Dbxref=GenBank:WP_014614090.1;Name=WP_014614090.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167870.1;locus_tag=CYJ02_RS03290;product=succinate--CoA ligase subunit alpha;protein_id=WP_014614090.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 79415 80581 . - . ID=gene-CYJ02_RS03295;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CYJ02_RS03295;old_locus_tag=CYJ02_03295 NZ_PJUQ01000004.1 Protein Homology CDS 79415 80581 . - 0 ID=cds-WP_015729040.1;Parent=gene-CYJ02_RS03295;Dbxref=GenBank:WP_015729040.1;Name=WP_015729040.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CYJ02_RS03295;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_015729040.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 80843 81118 . - . ID=gene-CYJ02_RS03300;Name=CYJ02_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03300;old_locus_tag=CYJ02_03300 NZ_PJUQ01000004.1 Protein Homology CDS 80843 81118 . - 0 ID=cds-WP_015729039.1;Parent=gene-CYJ02_RS03300;Dbxref=GenBank:WP_015729039.1;Name=WP_015729039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614092.1;locus_tag=CYJ02_RS03300;product=hypothetical protein;protein_id=WP_015729039.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 81210 81995 . - . ID=gene-CYJ02_RS03305;Name=CYJ02_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03305;old_locus_tag=CYJ02_03305 NZ_PJUQ01000004.1 Protein Homology CDS 81210 81995 . - 0 ID=cds-WP_100006558.1;Parent=gene-CYJ02_RS03305;Dbxref=GenBank:WP_100006558.1;Name=WP_100006558.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=CYJ02_RS03305;product=ribonuclease HII;protein_id=WP_100006558.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 81988 82860 . - . ID=gene-CYJ02_RS03310;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=CYJ02_RS03310;old_locus_tag=CYJ02_03310 NZ_PJUQ01000004.1 Protein Homology CDS 81988 82860 . - 0 ID=cds-WP_015729037.1;Parent=gene-CYJ02_RS03310;Dbxref=GenBank:WP_015729037.1;Name=WP_015729037.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167874.1;locus_tag=CYJ02_RS03310;product=ribosome biogenesis GTPase YlqF;protein_id=WP_015729037.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 83088 83471 . + . ID=gene-CYJ02_RS03315;Name=CYJ02_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03315;old_locus_tag=CYJ02_03315 NZ_PJUQ01000004.1 Protein Homology CDS 83088 83471 . + 0 ID=cds-WP_015729036.1;Parent=gene-CYJ02_RS03315;Dbxref=GenBank:WP_015729036.1;Name=WP_015729036.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=CYJ02_RS03315;product=GtrA family protein;protein_id=WP_015729036.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 83491 86100 . + . ID=gene-CYJ02_RS03320;Name=CYJ02_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03320;old_locus_tag=CYJ02_03320 NZ_PJUQ01000004.1 Protein Homology CDS 83491 86100 . + 0 ID=cds-WP_101431375.1;Parent=gene-CYJ02_RS03320;Dbxref=GenBank:WP_101431375.1;Name=WP_101431375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=CYJ02_RS03320;product=YfhO family protein;protein_id=WP_101431375.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 86097 88691 . + . ID=gene-CYJ02_RS03325;Name=CYJ02_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03325;old_locus_tag=CYJ02_03325 NZ_PJUQ01000004.1 Protein Homology CDS 86097 88691 . + 0 ID=cds-WP_101431376.1;Parent=gene-CYJ02_RS03325;Dbxref=GenBank:WP_101431376.1;Name=WP_101431376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729034.1;locus_tag=CYJ02_RS03325;product=YfhO family protein;protein_id=WP_101431376.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 88918 89550 . + . ID=gene-CYJ02_RS03330;Name=CYJ02_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03330;old_locus_tag=CYJ02_03330 NZ_PJUQ01000004.1 Protein Homology CDS 88918 89550 . + 0 ID=cds-WP_063278816.1;Parent=gene-CYJ02_RS03330;Dbxref=GenBank:WP_063278816.1;Name=WP_063278816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219877.1;locus_tag=CYJ02_RS03330;product=hypothetical protein;protein_id=WP_063278816.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 89715 90080 . - . ID=gene-CYJ02_RS12675;Name=CYJ02_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12675 NZ_PJUQ01000004.1 GeneMarkS-2+ CDS 89715 90080 . - 0 ID=cds-WP_241901300.1;Parent=gene-CYJ02_RS12675;Dbxref=GenBank:WP_241901300.1;Name=WP_241901300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12675;product=hypothetical protein;protein_id=WP_241901300.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 90139 90444 . - . ID=gene-CYJ02_RS12680;Name=CYJ02_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12680 NZ_PJUQ01000004.1 GeneMarkS-2+ CDS 90139 90444 . - 0 ID=cds-WP_241901302.1;Parent=gene-CYJ02_RS12680;Dbxref=GenBank:WP_241901302.1;Name=WP_241901302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12680;product=hypothetical protein;protein_id=WP_241901302.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 90837 91265 . - . ID=gene-CYJ02_RS03345;Name=CYJ02_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03345;old_locus_tag=CYJ02_03345 NZ_PJUQ01000004.1 Protein Homology CDS 90837 91265 . - 0 ID=cds-WP_101431377.1;Parent=gene-CYJ02_RS03345;Dbxref=GenBank:WP_101431377.1;Name=WP_101431377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729030.1;locus_tag=CYJ02_RS03345;product=hypothetical protein;protein_id=WP_101431377.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 91769 91906 . + . ID=gene-CYJ02_RS03350;Name=CYJ02_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03350;old_locus_tag=CYJ02_03350 NZ_PJUQ01000004.1 Protein Homology CDS 91769 91906 . + 0 ID=cds-WP_014614102.1;Parent=gene-CYJ02_RS03350;Dbxref=GenBank:WP_014614102.1;Name=WP_014614102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614102.1;locus_tag=CYJ02_RS03350;product=beta-class phenol-soluble modulin;protein_id=WP_014614102.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 92174 92524 . - . ID=gene-CYJ02_RS03355;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03355;old_locus_tag=CYJ02_03355 NZ_PJUQ01000004.1 Protein Homology CDS 92174 92524 . - 0 ID=cds-WP_014614103.1;Parent=gene-CYJ02_RS03355;Dbxref=GenBank:WP_014614103.1;Name=WP_014614103.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=CYJ02_RS03355;product=50S ribosomal protein L19;protein_id=WP_014614103.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 92632 93363 . - . ID=gene-CYJ02_RS03360;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CYJ02_RS03360;old_locus_tag=CYJ02_03360 NZ_PJUQ01000004.1 Protein Homology CDS 92632 93363 . - 0 ID=cds-WP_014614104.1;Parent=gene-CYJ02_RS03360;Dbxref=GenBank:WP_014614104.1;Name=WP_014614104.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165492.1;locus_tag=CYJ02_RS03360;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_014614104.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 93360 93863 . - . ID=gene-CYJ02_RS03365;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CYJ02_RS03365;old_locus_tag=CYJ02_03365 NZ_PJUQ01000004.1 Protein Homology CDS 93360 93863 . - 0 ID=cds-WP_014614105.1;Parent=gene-CYJ02_RS03365;Dbxref=GenBank:WP_014614105.1;Name=WP_014614105.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=CYJ02_RS03365;product=ribosome maturation factor RimM;protein_id=WP_014614105.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 94186 94461 . - . ID=gene-CYJ02_RS03370;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CYJ02_RS03370;old_locus_tag=CYJ02_03370 NZ_PJUQ01000004.1 Protein Homology CDS 94186 94461 . - 0 ID=cds-WP_014614106.1;Parent=gene-CYJ02_RS03370;Dbxref=GenBank:WP_014614106.1;Name=WP_014614106.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=CYJ02_RS03370;product=30S ribosomal protein S16;protein_id=WP_014614106.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 94675 95346 . - . ID=gene-CYJ02_RS03375;Name=CYJ02_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03375;old_locus_tag=CYJ02_03375 NZ_PJUQ01000004.1 Protein Homology CDS 94675 95346 . - 0 ID=cds-WP_101431378.1;Parent=gene-CYJ02_RS03375;Dbxref=GenBank:WP_101431378.1;Name=WP_101431378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729028.1;locus_tag=CYJ02_RS03375;product=hypothetical protein;protein_id=WP_101431378.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 95448 96713 . - . ID=gene-CYJ02_RS03380;Name=CYJ02_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03380;old_locus_tag=CYJ02_03380 NZ_PJUQ01000004.1 Protein Homology CDS 95448 96713 . - 0 ID=cds-WP_101431379.1;Parent=gene-CYJ02_RS03380;Dbxref=GenBank:WP_101431379.1;Name=WP_101431379.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449171.1;locus_tag=CYJ02_RS03380;product=restriction endonuclease subunit S;protein_id=WP_101431379.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 96706 98262 . - . ID=gene-CYJ02_RS03385;Name=CYJ02_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03385;old_locus_tag=CYJ02_03385 NZ_PJUQ01000004.1 Protein Homology CDS 96706 98262 . - 0 ID=cds-WP_101431380.1;Parent=gene-CYJ02_RS03385;Dbxref=GenBank:WP_101431380.1;Name=WP_101431380.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028656.1;locus_tag=CYJ02_RS03385;product=type I restriction-modification system subunit M;protein_id=WP_101431380.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 98706 101498 . - . ID=gene-CYJ02_RS03390;Name=CYJ02_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03390;old_locus_tag=CYJ02_03390 NZ_PJUQ01000004.1 Protein Homology CDS 98706 101498 . - 0 ID=cds-WP_101431381.1;Parent=gene-CYJ02_RS03390;Dbxref=GenBank:WP_101431381.1;Name=WP_101431381.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511775.1;locus_tag=CYJ02_RS03390;product=type I restriction endonuclease subunit R;protein_id=WP_101431381.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 102290 103480 . - . ID=gene-CYJ02_RS03395;Name=CYJ02_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03395;old_locus_tag=CYJ02_03395 NZ_PJUQ01000004.1 Protein Homology CDS 102290 103480 . - 0 ID=cds-WP_101431382.1;Parent=gene-CYJ02_RS03395;Dbxref=GenBank:WP_101431382.1;Name=WP_101431382.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729027.1;locus_tag=CYJ02_RS03395;product=MFS transporter;protein_id=WP_101431382.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 103795 105072 . + . ID=gene-CYJ02_RS03400;Name=CYJ02_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03400;old_locus_tag=CYJ02_03400 NZ_PJUQ01000004.1 Protein Homology CDS 103795 105072 . + 0 ID=cds-WP_158665305.1;Parent=gene-CYJ02_RS03400;Dbxref=GenBank:WP_158665305.1;Name=WP_158665305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015983.7;locus_tag=CYJ02_RS03400;product=radical SAM/SPASM domain-containing protein;protein_id=WP_158665305.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 105050 105847 . + . ID=gene-CYJ02_RS03405;Name=CYJ02_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03405;old_locus_tag=CYJ02_03405 NZ_PJUQ01000004.1 GeneMarkS-2+ CDS 105050 105847 . + 0 ID=cds-WP_096533825.1;Parent=gene-CYJ02_RS03405;Dbxref=GenBank:WP_096533825.1;Name=WP_096533825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS03405;product=hypothetical protein;protein_id=WP_096533825.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq pseudogene 105970 106068 . + . ID=gene-CYJ02_RS12685;Name=CYJ02_RS12685;end_range=106068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12685;partial=true;pseudo=true NZ_PJUQ01000004.1 Protein Homology CDS 105970 106068 . + 0 ID=cds-CYJ02_RS12685;Parent=gene-CYJ02_RS12685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=106068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283015.1;locus_tag=CYJ02_RS12685;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 106206 106319 . - . ID=gene-CYJ02_RS12690;Name=CYJ02_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12690 NZ_PJUQ01000004.1 Protein Homology CDS 106206 106319 . - 0 ID=cds-WP_233535888.1;Parent=gene-CYJ02_RS12690;Dbxref=GenBank:WP_233535888.1;Name=WP_233535888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014970.7;locus_tag=CYJ02_RS12690;product=hypothetical protein;protein_id=WP_233535888.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 106322 106582 . - . ID=gene-CYJ02_RS03410;Name=CYJ02_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03410;old_locus_tag=CYJ02_03410 NZ_PJUQ01000004.1 GeneMarkS-2+ CDS 106322 106582 . - 0 ID=cds-WP_234988424.1;Parent=gene-CYJ02_RS03410;Dbxref=GenBank:WP_234988424.1;Name=WP_234988424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS03410;product=MutH/Sau3AI family endonuclease;protein_id=WP_234988424.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 106793 107740 . + . ID=gene-CYJ02_RS03415;Name=CYJ02_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03415;old_locus_tag=CYJ02_03415 NZ_PJUQ01000004.1 Protein Homology CDS 106793 107740 . + 0 ID=cds-WP_014612874.1;Parent=gene-CYJ02_RS03415;Dbxref=GenBank:WP_014612874.1;Name=WP_014612874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612874.1;locus_tag=CYJ02_RS03415;product=nucleoside hydrolase;protein_id=WP_014612874.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 107854 110850 . - . ID=gene-CYJ02_RS03420;Name=CYJ02_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03420;old_locus_tag=CYJ02_03420 NZ_PJUQ01000004.1 Protein Homology CDS 107854 110850 . - 0 ID=cds-WP_063278627.1;Parent=gene-CYJ02_RS03420;Dbxref=GenBank:WP_063278627.1;Name=WP_063278627.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612873.1;locus_tag=CYJ02_RS03420;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=WP_063278627.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 110878 112257 . - . ID=gene-CYJ02_RS03425;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03425;old_locus_tag=CYJ02_03425 NZ_PJUQ01000004.1 Protein Homology CDS 110878 112257 . - 0 ID=cds-WP_014612872.1;Parent=gene-CYJ02_RS03425;Dbxref=GenBank:WP_014612872.1;Name=WP_014612872.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612872.1;locus_tag=CYJ02_RS03425;product=melibiose:sodium transporter MelB;protein_id=WP_014612872.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 112776 113966 . + . ID=gene-CYJ02_RS03430;Name=CYJ02_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03430;old_locus_tag=CYJ02_03430 NZ_PJUQ01000004.1 Protein Homology CDS 112776 113966 . + 0 ID=cds-WP_014612871.1;Parent=gene-CYJ02_RS03430;Dbxref=GenBank:WP_014612871.1;Name=WP_014612871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167057.1;locus_tag=CYJ02_RS03430;product=YbfB/YjiJ family MFS transporter;protein_id=WP_014612871.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 114122 115429 . - . ID=gene-CYJ02_RS03435;Name=CYJ02_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03435;old_locus_tag=CYJ02_03435 NZ_PJUQ01000004.1 Protein Homology CDS 114122 115429 . - 0 ID=cds-WP_014612870.1;Parent=gene-CYJ02_RS03435;Dbxref=GenBank:WP_014612870.1;Name=WP_014612870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006927.0;locus_tag=CYJ02_RS03435;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_014612870.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 115619 116482 . - . ID=gene-CYJ02_RS03440;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CYJ02_RS03440;old_locus_tag=CYJ02_03440 NZ_PJUQ01000004.1 Protein Homology CDS 115619 116482 . - 0 ID=cds-WP_096536230.1;Parent=gene-CYJ02_RS03440;Dbxref=GenBank:WP_096536230.1;Name=WP_096536230.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729709.1;locus_tag=CYJ02_RS03440;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_096536230.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 116504 119257 . - . ID=gene-CYJ02_RS03445;Name=CYJ02_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03445;old_locus_tag=CYJ02_03445 NZ_PJUQ01000004.1 Protein Homology CDS 116504 119257 . - 0 ID=cds-WP_065353973.1;Parent=gene-CYJ02_RS03445;Dbxref=GenBank:WP_065353973.1;Name=WP_065353973.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: protein motif:HMM:NF016357.7;locus_tag=CYJ02_RS03445;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_065353973.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 119552 120694 . + . ID=gene-CYJ02_RS03450;Name=CYJ02_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03450;old_locus_tag=CYJ02_03450 NZ_PJUQ01000004.1 Protein Homology CDS 119552 120694 . + 0 ID=cds-WP_157929425.1;Parent=gene-CYJ02_RS03450;Dbxref=GenBank:WP_157929425.1;Name=WP_157929425.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ02_RS03450;product=MFS transporter;protein_id=WP_157929425.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 120865 121818 . + . ID=gene-CYJ02_RS03455;Name=CYJ02_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03455;old_locus_tag=CYJ02_03455 NZ_PJUQ01000004.1 Protein Homology CDS 120865 121818 . + 0 ID=cds-WP_101431384.1;Parent=gene-CYJ02_RS03455;Dbxref=GenBank:WP_101431384.1;Name=WP_101431384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837111.1;locus_tag=CYJ02_RS03455;product=extracellular solute-binding protein;protein_id=WP_101431384.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 121815 123368 . + . ID=gene-CYJ02_RS03460;Name=CYJ02_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03460;old_locus_tag=CYJ02_03460 NZ_PJUQ01000004.1 Protein Homology CDS 121815 123368 . + 0 ID=cds-WP_101431385.1;Parent=gene-CYJ02_RS03460;Dbxref=GenBank:WP_101431385.1;Name=WP_101431385.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612867.1;locus_tag=CYJ02_RS03460;product=sensor histidine kinase;protein_id=WP_101431385.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 123361 124104 . + . ID=gene-CYJ02_RS03465;Name=CYJ02_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03465;old_locus_tag=CYJ02_03465 NZ_PJUQ01000004.1 Protein Homology CDS 123361 124104 . + 0 ID=cds-WP_100007357.1;Parent=gene-CYJ02_RS03465;Dbxref=GenBank:WP_100007357.1;Name=WP_100007357.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612866.1;locus_tag=CYJ02_RS03465;product=response regulator transcription factor;protein_id=WP_100007357.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 124307 125686 . - . ID=gene-CYJ02_RS03470;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CYJ02_RS03470;old_locus_tag=CYJ02_03470 NZ_PJUQ01000004.1 Protein Homology CDS 124307 125686 . - 0 ID=cds-WP_014612865.1;Parent=gene-CYJ02_RS03470;Dbxref=GenBank:WP_014612865.1;Name=WP_014612865.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=CYJ02_RS03470;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_014612865.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 125956 126891 . + . ID=gene-CYJ02_RS03475;Name=CYJ02_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03475;old_locus_tag=CYJ02_03475 NZ_PJUQ01000004.1 Protein Homology CDS 125956 126891 . + 0 ID=cds-WP_014612864.1;Parent=gene-CYJ02_RS03475;Dbxref=GenBank:WP_014612864.1;Name=WP_014612864.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=CYJ02_RS03475;product=ketopantoate reductase family protein;protein_id=WP_014612864.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 127383 128069 . + . ID=gene-CYJ02_RS03480;Name=CYJ02_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03480;old_locus_tag=CYJ02_03480 NZ_PJUQ01000004.1 Protein Homology CDS 127383 128069 . + 0 ID=cds-WP_014612863.1;Parent=gene-CYJ02_RS03480;Dbxref=GenBank:WP_014612863.1;Name=WP_014612863.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169009.1;locus_tag=CYJ02_RS03480;product=acetolactate decarboxylase;protein_id=WP_014612863.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 128476 129366 . + . ID=gene-CYJ02_RS03485;Name=CYJ02_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03485;old_locus_tag=CYJ02_03485 NZ_PJUQ01000004.1 Protein Homology CDS 128476 129366 . + 0 ID=cds-WP_015729712.1;Parent=gene-CYJ02_RS03485;Dbxref=GenBank:WP_015729712.1;Name=WP_015729712.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729712.1;locus_tag=CYJ02_RS03485;product=fructose bisphosphate aldolase;protein_id=WP_015729712.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 129857 131530 . - . ID=gene-CYJ02_RS03490;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03490;old_locus_tag=CYJ02_03490 NZ_PJUQ01000004.1 Protein Homology CDS 129857 131530 . - 0 ID=cds-WP_101431386.1;Parent=gene-CYJ02_RS03490;Dbxref=GenBank:WP_101431386.1;Name=WP_101431386.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612861.1;locus_tag=CYJ02_RS03490;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=WP_101431386.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 131806 132498 . - . ID=gene-CYJ02_RS03495;Name=CYJ02_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03495;old_locus_tag=CYJ02_03495 NZ_PJUQ01000004.1 Protein Homology CDS 131806 132498 . - 0 ID=cds-WP_104052138.1;Parent=gene-CYJ02_RS03495;Dbxref=GenBank:WP_104052138.1;Name=WP_104052138.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=CYJ02_RS03495;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_104052138.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 132863 133252 . - . ID=gene-CYJ02_RS03500;Name=CYJ02_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03500;old_locus_tag=CYJ02_03500 NZ_PJUQ01000004.1 Protein Homology CDS 132863 133252 . - 0 ID=cds-WP_020219423.1;Parent=gene-CYJ02_RS03500;Dbxref=GenBank:WP_020219423.1;Name=WP_020219423.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219423.1;locus_tag=CYJ02_RS03500;product=tautomerase family protein;protein_id=WP_020219423.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 133368 134864 . - . ID=gene-CYJ02_RS03505;Name=CYJ02_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03505;old_locus_tag=CYJ02_03505 NZ_PJUQ01000004.1 Protein Homology CDS 133368 134864 . - 0 ID=cds-WP_101431387.1;Parent=gene-CYJ02_RS03505;Dbxref=GenBank:WP_101431387.1;Name=WP_101431387.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729716.1;locus_tag=CYJ02_RS03505;product=sodium:solute symporter family protein;protein_id=WP_101431387.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 134875 136254 . - . ID=gene-CYJ02_RS03510;Name=CYJ02_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03510;old_locus_tag=CYJ02_03510 NZ_PJUQ01000004.1 Protein Homology CDS 134875 136254 . - 0 ID=cds-WP_101431388.1;Parent=gene-CYJ02_RS03510;Dbxref=GenBank:WP_101431388.1;Name=WP_101431388.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729717.1;locus_tag=CYJ02_RS03510;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_101431388.1;transl_table=11 NZ_PJUQ01000004.1 cmsearch riboswitch 136300 136400 . - . ID=id-NZ_PJUQ01000004.1:136300..136400;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000004.1 RefSeq gene 136557 137834 . - . ID=gene-CYJ02_RS03515;Name=CYJ02_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03515;old_locus_tag=CYJ02_03515 NZ_PJUQ01000004.1 Protein Homology CDS 136557 137834 . - 0 ID=cds-WP_014612854.1;Parent=gene-CYJ02_RS03515;Dbxref=GenBank:WP_014612854.1;Name=WP_014612854.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=CYJ02_RS03515;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_014612854.1;transl_table=11 NZ_PJUQ01000004.1 cmsearch riboswitch 137898 137996 . - . ID=id-NZ_PJUQ01000004.1:137898..137996;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000004.1 RefSeq gene 138194 138733 . - . ID=gene-CYJ02_RS03520;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CYJ02_RS03520;old_locus_tag=CYJ02_03520 NZ_PJUQ01000004.1 Protein Homology CDS 138194 138733 . - 0 ID=cds-WP_101431389.1;Parent=gene-CYJ02_RS03520;Dbxref=GenBank:WP_101431389.1;Name=WP_101431389.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612853.1;locus_tag=CYJ02_RS03520;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_101431389.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 138730 140580 . - . ID=gene-CYJ02_RS03525;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CYJ02_RS03525;old_locus_tag=CYJ02_03525 NZ_PJUQ01000004.1 Protein Homology CDS 138730 140580 . - 0 ID=cds-WP_014612852.1;Parent=gene-CYJ02_RS03525;Dbxref=GenBank:WP_014612852.1;Name=WP_014612852.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=CYJ02_RS03525;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_014612852.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 141394 141507 . + . ID=gene-CYJ02_RS12295;Name=CYJ02_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12295 NZ_PJUQ01000004.1 Protein Homology CDS 141394 141507 . + 0 ID=cds-WP_110144662.1;Parent=gene-CYJ02_RS12295;Dbxref=GenBank:WP_110144662.1;Name=WP_110144662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033608.1;locus_tag=CYJ02_RS12295;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_110144662.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 141635 142996 . - . ID=gene-CYJ02_RS03530;Name=CYJ02_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03530;old_locus_tag=CYJ02_03530 NZ_PJUQ01000004.1 Protein Homology CDS 141635 142996 . - 0 ID=cds-WP_014612850.1;Parent=gene-CYJ02_RS03530;Dbxref=GenBank:WP_014612850.1;Name=WP_014612850.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219422.1;locus_tag=CYJ02_RS03530;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014612850.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 143015 143299 . - . ID=gene-CYJ02_RS03535;Name=CYJ02_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03535;old_locus_tag=CYJ02_03535 NZ_PJUQ01000004.1 Protein Homology CDS 143015 143299 . - 0 ID=cds-WP_014612849.1;Parent=gene-CYJ02_RS03535;Dbxref=GenBank:WP_014612849.1;Name=WP_014612849.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=CYJ02_RS03535;product=PTS sugar transporter subunit IIB;protein_id=WP_014612849.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 143296 143745 . - . ID=gene-CYJ02_RS03540;Name=CYJ02_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03540;old_locus_tag=CYJ02_03540 NZ_PJUQ01000004.1 Protein Homology CDS 143296 143745 . - 0 ID=cds-WP_014612848.1;Parent=gene-CYJ02_RS03540;Dbxref=GenBank:WP_014612848.1;Name=WP_014612848.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612848.1;locus_tag=CYJ02_RS03540;product=PTS sugar transporter subunit IIA;protein_id=WP_014612848.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 143758 145692 . - . ID=gene-CYJ02_RS03545;Name=CYJ02_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03545;old_locus_tag=CYJ02_03545 NZ_PJUQ01000004.1 Protein Homology CDS 143758 145692 . - 0 ID=cds-WP_015729721.1;Parent=gene-CYJ02_RS03545;Dbxref=GenBank:WP_015729721.1;Name=WP_015729721.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729721.1;locus_tag=CYJ02_RS03545;product=BglG family transcription antiterminator;protein_id=WP_015729721.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 146208 147242 . - . ID=gene-CYJ02_RS03550;Name=CYJ02_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03550;old_locus_tag=CYJ02_03550 NZ_PJUQ01000004.1 Protein Homology CDS 146208 147242 . - 0 ID=cds-WP_014612846.1;Parent=gene-CYJ02_RS03550;Dbxref=GenBank:WP_014612846.1;Name=WP_014612846.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612846.1;locus_tag=CYJ02_RS03550;product=sensor histidine kinase;protein_id=WP_014612846.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 147243 147929 . - . ID=gene-CYJ02_RS03555;Name=CYJ02_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03555;old_locus_tag=CYJ02_03555 NZ_PJUQ01000004.1 Protein Homology CDS 147243 147929 . - 0 ID=cds-WP_015729722.1;Parent=gene-CYJ02_RS03555;Dbxref=GenBank:WP_015729722.1;Name=WP_015729722.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729722.1;locus_tag=CYJ02_RS03555;product=response regulator transcription factor;protein_id=WP_015729722.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 147907 148365 . - . ID=gene-CYJ02_RS03560;Name=CYJ02_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03560;old_locus_tag=CYJ02_03560 NZ_PJUQ01000004.1 Protein Homology CDS 147907 148365 . - 0 ID=cds-WP_014612844.1;Parent=gene-CYJ02_RS03560;Dbxref=GenBank:WP_014612844.1;Name=WP_014612844.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612844.1;locus_tag=CYJ02_RS03560;product=DoxX family protein;protein_id=WP_014612844.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq gene 148405 148857 . - . ID=gene-CYJ02_RS03565;Name=CYJ02_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03565;old_locus_tag=CYJ02_03565 NZ_PJUQ01000004.1 Protein Homology CDS 148405 148857 . - 0 ID=cds-WP_014612843.1;Parent=gene-CYJ02_RS03565;Dbxref=GenBank:WP_014612843.1;Name=WP_014612843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093553.1;locus_tag=CYJ02_RS03565;product=DM13 domain-containing protein;protein_id=WP_014612843.1;transl_table=11 NZ_PJUQ01000004.1 RefSeq pseudogene 149257 149759 . + . ID=gene-CYJ02_RS03570;Name=CYJ02_RS03570;end_range=149759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS03570;old_locus_tag=CYJ02_03570;partial=true;pseudo=true NZ_PJUQ01000004.1 Protein Homology CDS 149257 149759 . + 0 ID=cds-CYJ02_RS03570;Parent=gene-CYJ02_RS03570;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=149759,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1;locus_tag=CYJ02_RS03570;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PJUQ01000040.1 1 5912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000040.1 RefSeq region 1 5912 . + . ID=NZ_PJUQ01000040.1:1..5912;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000040.1 RefSeq gene 1 270 . + . ID=gene-CYJ02_RS11700;Name=CYJ02_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11700;old_locus_tag=CYJ02_11700;partial=true;start_range=.,1 NZ_PJUQ01000040.1 Protein Homology CDS 1 270 . + 0 ID=cds-WP_335340965.1;Parent=gene-CYJ02_RS11700;Dbxref=GenBank:WP_335340965.1;Name=WP_335340965.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613021.1;locus_tag=CYJ02_RS11700;partial=true;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_335340965.1;start_range=.,1;transl_table=11 NZ_PJUQ01000040.1 RefSeq gene 263 1249 . + . ID=gene-CYJ02_RS11705;Name=CYJ02_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11705;old_locus_tag=CYJ02_11705 NZ_PJUQ01000040.1 Protein Homology CDS 263 1249 . + 0 ID=cds-WP_101431700.1;Parent=gene-CYJ02_RS11705;Dbxref=GenBank:WP_101431700.1;Name=WP_101431700.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613022.1;locus_tag=CYJ02_RS11705;product=ABC transporter ATP-binding protein;protein_id=WP_101431700.1;transl_table=11 NZ_PJUQ01000040.1 RefSeq gene 1246 2208 . + . ID=gene-CYJ02_RS11710;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ02_RS11710;old_locus_tag=CYJ02_11710 NZ_PJUQ01000040.1 Protein Homology CDS 1246 2208 . + 0 ID=cds-WP_101431701.1;Parent=gene-CYJ02_RS11710;Dbxref=GenBank:WP_101431701.1;Name=WP_101431701.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ02_RS11710;product=oligopeptide ABC transporter permease;protein_id=WP_101431701.1;transl_table=11 NZ_PJUQ01000040.1 RefSeq gene 2220 3113 . + . ID=gene-CYJ02_RS11715;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ02_RS11715;old_locus_tag=CYJ02_11715 NZ_PJUQ01000040.1 Protein Homology CDS 2220 3113 . + 0 ID=cds-WP_014613019.1;Parent=gene-CYJ02_RS11715;Dbxref=GenBank:WP_014613019.1;Name=WP_014613019.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613019.1;locus_tag=CYJ02_RS11715;product=oligopeptide ABC transporter permease;protein_id=WP_014613019.1;transl_table=11 NZ_PJUQ01000040.1 RefSeq gene 3345 5066 . + . ID=gene-CYJ02_RS11720;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ02_RS11720;old_locus_tag=CYJ02_11720 NZ_PJUQ01000040.1 Protein Homology CDS 3345 5066 . + 0 ID=cds-WP_014613020.1;Parent=gene-CYJ02_RS11720;Dbxref=GenBank:WP_014613020.1;Name=WP_014613020.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613020.1;locus_tag=CYJ02_RS11720;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_014613020.1;transl_table=11 NZ_PJUQ01000040.1 RefSeq gene 5172 5912 . + . ID=gene-CYJ02_RS11725;Name=CYJ02_RS11725;end_range=5912,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11725;old_locus_tag=CYJ02_11725;partial=true NZ_PJUQ01000040.1 Protein Homology CDS 5172 5912 . + 0 ID=cds-WP_101431702.1;Parent=gene-CYJ02_RS11725;Dbxref=GenBank:WP_101431702.1;Name=WP_101431702.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;end_range=5912,.;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613021.1;locus_tag=CYJ02_RS11725;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_101431702.1;transl_table=11 ##sequence-region NZ_PJUQ01000041.1 1 9196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000041.1 RefSeq region 1 9196 . + . ID=NZ_PJUQ01000041.1:1..9196;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000041.1 RefSeq gene 1 2615 . - . ID=gene-CYJ02_RS11730;Name=CYJ02_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11730;old_locus_tag=CYJ02_11730;partial=true;start_range=.,1 NZ_PJUQ01000041.1 Protein Homology CDS 1 2615 . - 0 ID=cds-WP_101431703.1;Parent=gene-CYJ02_RS11730;Dbxref=GenBank:WP_101431703.1;Name=WP_101431703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ02_RS11730;partial=true;product=SdrD B-like domain-containing protein;protein_id=WP_101431703.1;start_range=.,1;transl_table=11 NZ_PJUQ01000041.1 RefSeq pseudogene 3336 3467 . + . ID=gene-CYJ02_RS13125;Name=CYJ02_RS13125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13125;partial=true;pseudo=true;start_range=.,3336 NZ_PJUQ01000041.1 Protein Homology CDS 3336 3467 . + 0 ID=cds-CYJ02_RS13125;Parent=gene-CYJ02_RS13125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.7;locus_tag=CYJ02_RS13125;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3336;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 4648 5187 . + . ID=gene-CYJ02_RS11735;Name=CYJ02_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11735;old_locus_tag=CYJ02_11735 NZ_PJUQ01000041.1 GeneMarkS-2+ CDS 4648 5187 . + 0 ID=cds-WP_101431704.1;Parent=gene-CYJ02_RS11735;Dbxref=GenBank:WP_101431704.1;Name=WP_101431704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11735;product=hypothetical protein;protein_id=WP_101431704.1;transl_table=11 NZ_PJUQ01000041.1 RefSeq pseudogene 6143 6322 . - . ID=gene-CYJ02_RS11740;Name=CYJ02_RS11740;end_range=6322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS11740;old_locus_tag=CYJ02_11740;partial=true;pseudo=true;start_range=.,6143 NZ_PJUQ01000041.1 Protein Homology CDS 6143 6322 . - 0 ID=cds-CYJ02_RS11740;Parent=gene-CYJ02_RS11740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481934.1;locus_tag=CYJ02_RS11740;partial=true;product=transposase;pseudo=true;start_range=.,6143;transl_table=11 NZ_PJUQ01000041.1 RefSeq pseudogene 6343 6777 . + . ID=gene-CYJ02_RS11745;Name=CYJ02_RS11745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS11745;old_locus_tag=CYJ02_11745;pseudo=true NZ_PJUQ01000041.1 Protein Homology CDS 6343 6777 . + 0 ID=cds-CYJ02_RS11745;Parent=gene-CYJ02_RS11745;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.7;locus_tag=CYJ02_RS11745;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 6806 6967 . - . ID=gene-CYJ02_RS12425;Name=CYJ02_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12425 NZ_PJUQ01000041.1 GeneMarkS-2+ CDS 6806 6967 . - 0 ID=cds-WP_157929439.1;Parent=gene-CYJ02_RS12425;Dbxref=GenBank:WP_157929439.1;Name=WP_157929439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12425;product=hypothetical protein;protein_id=WP_157929439.1;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 7216 7338 . + . ID=gene-CYJ02_RS12930;Name=CYJ02_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12930 NZ_PJUQ01000041.1 GeneMarkS-2+ CDS 7216 7338 . + 0 ID=cds-WP_257976176.1;Parent=gene-CYJ02_RS12930;Dbxref=GenBank:WP_257976176.1;Name=WP_257976176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12930;product=hypothetical protein;protein_id=WP_257976176.1;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 7471 7608 . + . ID=gene-CYJ02_RS12430;Name=CYJ02_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12430 NZ_PJUQ01000041.1 GeneMarkS-2+ CDS 7471 7608 . + 0 ID=cds-WP_157929440.1;Parent=gene-CYJ02_RS12430;Dbxref=GenBank:WP_157929440.1;Name=WP_157929440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12430;product=hypothetical protein;protein_id=WP_157929440.1;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 7761 7958 . + . ID=gene-CYJ02_RS11750;Name=CYJ02_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11750;old_locus_tag=CYJ02_11750 NZ_PJUQ01000041.1 Protein Homology CDS 7761 7958 . + 0 ID=cds-WP_065520615.1;Parent=gene-CYJ02_RS11750;Dbxref=GenBank:WP_065520615.1;Name=WP_065520615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167535.1;locus_tag=CYJ02_RS11750;product=hypothetical protein;protein_id=WP_065520615.1;transl_table=11 NZ_PJUQ01000041.1 RefSeq pseudogene 8356 8554 . + . ID=gene-CYJ02_RS13130;Name=CYJ02_RS13130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13130;pseudo=true NZ_PJUQ01000041.1 Protein Homology CDS 8356 8554 . + 0 ID=cds-CYJ02_RS13130;Parent=gene-CYJ02_RS13130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728984.1;locus_tag=CYJ02_RS13130;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PJUQ01000041.1 RefSeq gene 8774 8862 . - . ID=gene-CYJ02_RS11755;Name=CYJ02_RS11755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11755;old_locus_tag=CYJ02_11755 NZ_PJUQ01000041.1 tRNAscan-SE tRNA 8774 8862 . - . ID=rna-CYJ02_RS11755;Parent=gene-CYJ02_RS11755;anticodon=(pos:complement(8825..8827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11755;product=tRNA-Ser NZ_PJUQ01000041.1 tRNAscan-SE exon 8774 8862 . - . ID=exon-CYJ02_RS11755-1;Parent=rna-CYJ02_RS11755;anticodon=(pos:complement(8825..8827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11755;product=tRNA-Ser NZ_PJUQ01000041.1 RefSeq gene 8864 8938 . - . ID=gene-CYJ02_RS11760;Name=CYJ02_RS11760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11760;old_locus_tag=CYJ02_11760 NZ_PJUQ01000041.1 tRNAscan-SE tRNA 8864 8938 . - . ID=rna-CYJ02_RS11760;Parent=gene-CYJ02_RS11760;anticodon=(pos:complement(8904..8906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11760;product=tRNA-Asn NZ_PJUQ01000041.1 tRNAscan-SE exon 8864 8938 . - . ID=exon-CYJ02_RS11760-1;Parent=rna-CYJ02_RS11760;anticodon=(pos:complement(8904..8906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11760;product=tRNA-Asn NZ_PJUQ01000041.1 RefSeq gene 8946 9019 . - . ID=gene-CYJ02_RS11765;Name=CYJ02_RS11765;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11765;old_locus_tag=CYJ02_11765 NZ_PJUQ01000041.1 tRNAscan-SE tRNA 8946 9019 . - . ID=rna-CYJ02_RS11765;Parent=gene-CYJ02_RS11765;anticodon=(pos:complement(8985..8987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11765;product=tRNA-Gly NZ_PJUQ01000041.1 tRNAscan-SE exon 8946 9019 . - . ID=exon-CYJ02_RS11765-1;Parent=rna-CYJ02_RS11765;anticodon=(pos:complement(8985..8987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11765;product=tRNA-Gly NZ_PJUQ01000041.1 RefSeq gene 9039 9111 . - . ID=gene-CYJ02_RS11770;Name=CYJ02_RS11770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11770;old_locus_tag=CYJ02_11770 NZ_PJUQ01000041.1 tRNAscan-SE tRNA 9039 9111 . - . ID=rna-CYJ02_RS11770;Parent=gene-CYJ02_RS11770;anticodon=(pos:complement(9076..9078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11770;product=tRNA-His NZ_PJUQ01000041.1 tRNAscan-SE exon 9039 9111 . - . ID=exon-CYJ02_RS11770-1;Parent=rna-CYJ02_RS11770;anticodon=(pos:complement(9076..9078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11770;product=tRNA-His NZ_PJUQ01000041.1 RefSeq gene 9126 9196 . - . ID=gene-CYJ02_RS11775;Name=CYJ02_RS11775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11775;old_locus_tag=CYJ02_11775 NZ_PJUQ01000041.1 tRNAscan-SE tRNA 9126 9196 . - . ID=rna-CYJ02_RS11775;Parent=gene-CYJ02_RS11775;anticodon=(pos:complement(9163..9165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11775;product=tRNA-Phe NZ_PJUQ01000041.1 tRNAscan-SE exon 9126 9196 . - . ID=exon-CYJ02_RS11775-1;Parent=rna-CYJ02_RS11775;anticodon=(pos:complement(9163..9165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11775;product=tRNA-Phe ##sequence-region NZ_PJUQ01000042.1 1 1666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000042.1 RefSeq region 1 1666 . + . ID=NZ_PJUQ01000042.1:1..1666;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000042.1 RefSeq gene 1 624 . + . ID=gene-CYJ02_RS11780;Name=CYJ02_RS11780;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS11780;old_locus_tag=CYJ02_11780;partial=true;start_range=.,1 NZ_PJUQ01000042.1 cmsearch rRNA 1 624 . + . ID=rna-CYJ02_RS11780;Parent=gene-CYJ02_RS11780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11780;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000042.1 cmsearch exon 1 624 . + . ID=exon-CYJ02_RS11780-1;Parent=rna-CYJ02_RS11780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11780;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000042.1 RefSeq gene 703 817 . + . ID=gene-CYJ02_RS11785;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ02_RS11785;old_locus_tag=CYJ02_11785 NZ_PJUQ01000042.1 cmsearch rRNA 703 817 . + . ID=rna-CYJ02_RS11785;Parent=gene-CYJ02_RS11785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11785;product=5S ribosomal RNA NZ_PJUQ01000042.1 cmsearch exon 703 817 . + . ID=exon-CYJ02_RS11785-1;Parent=rna-CYJ02_RS11785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS11785;product=5S ribosomal RNA NZ_PJUQ01000042.1 RefSeq gene 827 902 . + . ID=gene-CYJ02_RS11790;Name=CYJ02_RS11790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11790;old_locus_tag=CYJ02_11790 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 827 902 . + . ID=rna-CYJ02_RS11790;Parent=gene-CYJ02_RS11790;anticodon=(pos:860..862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11790;product=tRNA-Val NZ_PJUQ01000042.1 tRNAscan-SE exon 827 902 . + . ID=exon-CYJ02_RS11790-1;Parent=rna-CYJ02_RS11790;anticodon=(pos:860..862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11790;product=tRNA-Val NZ_PJUQ01000042.1 RefSeq gene 905 980 . + . ID=gene-CYJ02_RS11795;Name=CYJ02_RS11795;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11795;old_locus_tag=CYJ02_11795 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 905 980 . + . ID=rna-CYJ02_RS11795;Parent=gene-CYJ02_RS11795;anticodon=(pos:938..940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11795;product=tRNA-Thr NZ_PJUQ01000042.1 tRNAscan-SE exon 905 980 . + . ID=exon-CYJ02_RS11795-1;Parent=rna-CYJ02_RS11795;anticodon=(pos:938..940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11795;product=tRNA-Thr NZ_PJUQ01000042.1 RefSeq gene 985 1060 . + . ID=gene-CYJ02_RS11800;Name=CYJ02_RS11800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11800;old_locus_tag=CYJ02_11800 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 985 1060 . + . ID=rna-CYJ02_RS11800;Parent=gene-CYJ02_RS11800;anticodon=(pos:1018..1020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11800;product=tRNA-Lys NZ_PJUQ01000042.1 tRNAscan-SE exon 985 1060 . + . ID=exon-CYJ02_RS11800-1;Parent=rna-CYJ02_RS11800;anticodon=(pos:1018..1020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11800;product=tRNA-Lys NZ_PJUQ01000042.1 RefSeq gene 1076 1150 . + . ID=gene-CYJ02_RS11805;Name=CYJ02_RS11805;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11805;old_locus_tag=CYJ02_11805 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 1076 1150 . + . ID=rna-CYJ02_RS11805;Parent=gene-CYJ02_RS11805;anticodon=(pos:1108..1110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11805;product=tRNA-Gly NZ_PJUQ01000042.1 tRNAscan-SE exon 1076 1150 . + . ID=exon-CYJ02_RS11805-1;Parent=rna-CYJ02_RS11805;anticodon=(pos:1108..1110);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11805;product=tRNA-Gly NZ_PJUQ01000042.1 RefSeq gene 1159 1247 . + . ID=gene-CYJ02_RS11810;Name=CYJ02_RS11810;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11810;old_locus_tag=CYJ02_11810 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 1159 1247 . + . ID=rna-CYJ02_RS11810;Parent=gene-CYJ02_RS11810;anticodon=(pos:1193..1195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11810;product=tRNA-Leu NZ_PJUQ01000042.1 tRNAscan-SE exon 1159 1247 . + . ID=exon-CYJ02_RS11810-1;Parent=rna-CYJ02_RS11810;anticodon=(pos:1193..1195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11810;product=tRNA-Leu NZ_PJUQ01000042.1 RefSeq gene 1259 1335 . + . ID=gene-CYJ02_RS11815;Name=CYJ02_RS11815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11815;old_locus_tag=CYJ02_11815 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 1259 1335 . + . ID=rna-CYJ02_RS11815;Parent=gene-CYJ02_RS11815;anticodon=(pos:1293..1295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11815;product=tRNA-Arg NZ_PJUQ01000042.1 tRNAscan-SE exon 1259 1335 . + . ID=exon-CYJ02_RS11815-1;Parent=rna-CYJ02_RS11815;anticodon=(pos:1293..1295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11815;product=tRNA-Arg NZ_PJUQ01000042.1 RefSeq gene 1345 1418 . + . ID=gene-CYJ02_RS11820;Name=CYJ02_RS11820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11820;old_locus_tag=CYJ02_11820 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 1345 1418 . + . ID=rna-CYJ02_RS11820;Parent=gene-CYJ02_RS11820;anticodon=(pos:1379..1381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11820;product=tRNA-Pro NZ_PJUQ01000042.1 tRNAscan-SE exon 1345 1418 . + . ID=exon-CYJ02_RS11820-1;Parent=rna-CYJ02_RS11820;anticodon=(pos:1379..1381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11820;product=tRNA-Pro NZ_PJUQ01000042.1 RefSeq gene 1436 1511 . + . ID=gene-CYJ02_RS11825;Name=CYJ02_RS11825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11825;old_locus_tag=CYJ02_11825 NZ_PJUQ01000042.1 tRNAscan-SE tRNA 1436 1511 . + . ID=rna-CYJ02_RS11825;Parent=gene-CYJ02_RS11825;anticodon=(pos:1469..1471);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11825;product=tRNA-Ala NZ_PJUQ01000042.1 tRNAscan-SE exon 1436 1511 . + . ID=exon-CYJ02_RS11825-1;Parent=rna-CYJ02_RS11825;anticodon=(pos:1469..1471);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11825;product=tRNA-Ala ##sequence-region NZ_PJUQ01000043.1 1 7404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000043.1 RefSeq region 1 7404 . + . ID=NZ_PJUQ01000043.1:1..7404;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000043.1 RefSeq gene 1 904 . + . ID=gene-CYJ02_RS12935;Name=CYJ02_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12935;old_locus_tag=CYJ02_11830;partial=true;start_range=.,1 NZ_PJUQ01000043.1 Protein Homology CDS 1 904 . + 1 ID=cds-WP_133121716.1;Parent=gene-CYJ02_RS12935;Dbxref=GenBank:WP_133121716.1;Name=WP_133121716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ02_RS12935;partial=true;product=SdrD B-like domain-containing protein;protein_id=WP_133121716.1;start_range=.,1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 1000 2514 . - . ID=gene-CYJ02_RS11835;Name=CYJ02_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11835;old_locus_tag=CYJ02_11835 NZ_PJUQ01000043.1 Protein Homology CDS 1000 2514 . - 0 ID=cds-WP_101431706.1;Parent=gene-CYJ02_RS11835;Dbxref=GenBank:WP_101431706.1;Name=WP_101431706.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614334.1;locus_tag=CYJ02_RS11835;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_101431706.1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 2868 2996 . + . ID=gene-CYJ02_RS11840;Name=CYJ02_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11840;old_locus_tag=CYJ02_11840 NZ_PJUQ01000043.1 Protein Homology CDS 2868 2996 . + 0 ID=cds-WP_014614335.1;Parent=gene-CYJ02_RS11840;Dbxref=GenBank:WP_014614335.1;Name=WP_014614335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=CYJ02_RS11840;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_014614335.1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 3016 4470 . + . ID=gene-CYJ02_RS11845;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CYJ02_RS11845;old_locus_tag=CYJ02_11845 NZ_PJUQ01000043.1 Protein Homology CDS 3016 4470 . + 0 ID=cds-WP_015728921.1;Parent=gene-CYJ02_RS11845;Dbxref=GenBank:WP_015728921.1;Name=WP_015728921.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614336.1;locus_tag=CYJ02_RS11845;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_015728921.1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 4467 5684 . + . ID=gene-CYJ02_RS11850;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=CYJ02_RS11850;old_locus_tag=CYJ02_11850 NZ_PJUQ01000043.1 Protein Homology CDS 4467 5684 . + 0 ID=cds-WP_101431707.1;Parent=gene-CYJ02_RS11850;Dbxref=GenBank:WP_101431707.1;Name=WP_101431707.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=CYJ02_RS11850;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_101431707.1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 5697 5933 . + . ID=gene-CYJ02_RS11855;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CYJ02_RS11855;old_locus_tag=CYJ02_11855 NZ_PJUQ01000043.1 Protein Homology CDS 5697 5933 . + 0 ID=cds-WP_014614338.1;Parent=gene-CYJ02_RS11855;Dbxref=GenBank:WP_014614338.1;Name=WP_014614338.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CYJ02_RS11855;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_014614338.1;transl_table=11 NZ_PJUQ01000043.1 RefSeq gene 5930 7072 . + . ID=gene-CYJ02_RS11860;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CYJ02_RS11860;old_locus_tag=CYJ02_11860 NZ_PJUQ01000043.1 Protein Homology CDS 5930 7072 . + 0 ID=cds-WP_014614339.1;Parent=gene-CYJ02_RS11860;Dbxref=GenBank:WP_014614339.1;Name=WP_014614339.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614339.1;locus_tag=CYJ02_RS11860;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_014614339.1;transl_table=11 ##sequence-region NZ_PJUQ01000044.1 1 6054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000044.1 RefSeq region 1 6054 . + . ID=NZ_PJUQ01000044.1:1..6054;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000044.1 RefSeq gene 60 572 . - . ID=gene-CYJ02_RS11865;Name=CYJ02_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11865;old_locus_tag=CYJ02_11865 NZ_PJUQ01000044.1 Protein Homology CDS 60 572 . - 0 ID=cds-WP_014613557.1;Parent=gene-CYJ02_RS11865;Dbxref=GenBank:WP_014613557.1;Name=WP_014613557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613557.1;locus_tag=CYJ02_RS11865;product=antibiotic biosynthesis monooxygenase;protein_id=WP_014613557.1;transl_table=11 NZ_PJUQ01000044.1 RefSeq gene 884 1918 . + . ID=gene-CYJ02_RS11870;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CYJ02_RS11870;old_locus_tag=CYJ02_11870 NZ_PJUQ01000044.1 Protein Homology CDS 884 1918 . + 0 ID=cds-WP_014613558.1;Parent=gene-CYJ02_RS11870;Dbxref=GenBank:WP_014613558.1;Name=WP_014613558.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500461.1;locus_tag=CYJ02_RS11870;product=uroporphyrinogen decarboxylase;protein_id=WP_014613558.1;transl_table=11 NZ_PJUQ01000044.1 RefSeq gene 1956 2888 . + . ID=gene-CYJ02_RS11875;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CYJ02_RS11875;old_locus_tag=CYJ02_11875 NZ_PJUQ01000044.1 Protein Homology CDS 1956 2888 . + 0 ID=cds-WP_014613559.1;Parent=gene-CYJ02_RS11875;Dbxref=GenBank:WP_014613559.1;Name=WP_014613559.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=CYJ02_RS11875;product=ferrochelatase;protein_id=WP_014613559.1;transl_table=11 NZ_PJUQ01000044.1 RefSeq gene 2894 4297 . + . ID=gene-CYJ02_RS11880;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CYJ02_RS11880;old_locus_tag=CYJ02_11880 NZ_PJUQ01000044.1 Protein Homology CDS 2894 4297 . + 0 ID=cds-WP_014613560.1;Parent=gene-CYJ02_RS11880;Dbxref=GenBank:WP_014613560.1;Name=WP_014613560.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164996.1;locus_tag=CYJ02_RS11880;product=protoporphyrinogen oxidase;protein_id=WP_014613560.1;transl_table=11 NZ_PJUQ01000044.1 RefSeq gene 4555 5109 . + . ID=gene-CYJ02_RS11885;Name=CYJ02_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11885;old_locus_tag=CYJ02_11885 NZ_PJUQ01000044.1 Protein Homology CDS 4555 5109 . + 0 ID=cds-WP_015729355.1;Parent=gene-CYJ02_RS11885;Dbxref=GenBank:WP_015729355.1;Name=WP_015729355.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=CYJ02_RS11885;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_015729355.1;transl_table=11 NZ_PJUQ01000044.1 RefSeq gene 5450 5524 . + . ID=gene-CYJ02_RS11890;Name=CYJ02_RS11890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11890;old_locus_tag=CYJ02_11890 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5450 5524 . + . ID=rna-CYJ02_RS11890;Parent=gene-CYJ02_RS11890;anticodon=(pos:5483..5485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11890;product=tRNA-Glu NZ_PJUQ01000044.1 tRNAscan-SE exon 5450 5524 . + . ID=exon-CYJ02_RS11890-1;Parent=rna-CYJ02_RS11890;anticodon=(pos:5483..5485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11890;product=tRNA-Glu NZ_PJUQ01000044.1 RefSeq gene 5531 5607 . + . ID=gene-CYJ02_RS11895;Name=CYJ02_RS11895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11895;old_locus_tag=CYJ02_11895 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5531 5607 . + . ID=rna-CYJ02_RS11895;Parent=gene-CYJ02_RS11895;anticodon=(pos:5565..5567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11895;product=tRNA-Asp NZ_PJUQ01000044.1 tRNAscan-SE exon 5531 5607 . + . ID=exon-CYJ02_RS11895-1;Parent=rna-CYJ02_RS11895;anticodon=(pos:5565..5567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11895;product=tRNA-Asp NZ_PJUQ01000044.1 RefSeq gene 5618 5690 . + . ID=gene-CYJ02_RS11900;Name=CYJ02_RS11900;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11900;old_locus_tag=CYJ02_11900 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5618 5690 . + . ID=rna-CYJ02_RS11900;Parent=gene-CYJ02_RS11900;anticodon=(pos:5651..5653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11900;product=tRNA-Phe NZ_PJUQ01000044.1 tRNAscan-SE exon 5618 5690 . + . ID=exon-CYJ02_RS11900-1;Parent=rna-CYJ02_RS11900;anticodon=(pos:5651..5653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11900;product=tRNA-Phe NZ_PJUQ01000044.1 RefSeq gene 5699 5774 . + . ID=gene-CYJ02_RS11905;Name=CYJ02_RS11905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11905;old_locus_tag=CYJ02_11905 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5699 5774 . + . ID=rna-CYJ02_RS11905;Parent=gene-CYJ02_RS11905;anticodon=(pos:5732..5734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11905;product=tRNA-Thr NZ_PJUQ01000044.1 tRNAscan-SE exon 5699 5774 . + . ID=exon-CYJ02_RS11905-1;Parent=rna-CYJ02_RS11905;anticodon=(pos:5732..5734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11905;product=tRNA-Thr NZ_PJUQ01000044.1 RefSeq gene 5781 5853 . + . ID=gene-CYJ02_RS11910;Name=CYJ02_RS11910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11910;old_locus_tag=CYJ02_11910 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5781 5853 . + . ID=rna-CYJ02_RS11910;Parent=gene-CYJ02_RS11910;anticodon=(pos:5814..5816);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11910;product=tRNA-Lys NZ_PJUQ01000044.1 tRNAscan-SE exon 5781 5853 . + . ID=exon-CYJ02_RS11910-1;Parent=rna-CYJ02_RS11910;anticodon=(pos:5814..5816);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11910;product=tRNA-Lys NZ_PJUQ01000044.1 RefSeq gene 5858 5939 . + . ID=gene-CYJ02_RS11915;Name=CYJ02_RS11915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11915;old_locus_tag=CYJ02_11915 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5858 5939 . + . ID=rna-CYJ02_RS11915;Parent=gene-CYJ02_RS11915;anticodon=(pos:5892..5894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11915;product=tRNA-Leu NZ_PJUQ01000044.1 tRNAscan-SE exon 5858 5939 . + . ID=exon-CYJ02_RS11915-1;Parent=rna-CYJ02_RS11915;anticodon=(pos:5892..5894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11915;product=tRNA-Leu NZ_PJUQ01000044.1 RefSeq gene 5943 6017 . + . ID=gene-CYJ02_RS11920;Name=CYJ02_RS11920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS11920;old_locus_tag=CYJ02_11920 NZ_PJUQ01000044.1 tRNAscan-SE tRNA 5943 6017 . + . ID=rna-CYJ02_RS11920;Parent=gene-CYJ02_RS11920;anticodon=(pos:5975..5977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11920;product=tRNA-Gly NZ_PJUQ01000044.1 tRNAscan-SE exon 5943 6017 . + . ID=exon-CYJ02_RS11920-1;Parent=rna-CYJ02_RS11920;anticodon=(pos:5975..5977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS11920;product=tRNA-Gly ##sequence-region NZ_PJUQ01000045.1 1 4529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000045.1 RefSeq region 1 4529 . + . ID=NZ_PJUQ01000045.1:1..4529;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000045.1 RefSeq pseudogene 1 4529 . + . ID=gene-CYJ02_RS12850;Name=spsJ;end_range=4529,.;gbkey=Gene;gene=spsJ;gene_biotype=pseudogene;locus_tag=CYJ02_RS12850;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000045.1 Protein Homology CDS 1 4529 . + 1 ID=cds-CYJ02_RS12850;Parent=gene-CYJ02_RS12850;Note=All full-length members of this family of proteins%2C SpsJ from Staphylococcus pseudintermedius or closely related species%2C are very long%2C starting with a KxYKxGKxW type signal peptide and ending with an LPXTG-containing sorting signal for anchoring to the cell wall. SpsJ is encoded in a locus that contains genes of the accessory Sec system%2C is rich in Ser residues likely to be glycosylated%2C and is likely to play a major role in determining the host range and tissue tropisms. Staphylococcus pseudintermedius is best known as pathogen of dogs and other domestic animals%2C but occasionally affects humans as well.%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=4529,.;gbkey=CDS;gene=spsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612818.1;locus_tag=CYJ02_RS12850;partial=true;product=accessory Sec-dependent glycoprotein adhesin SpsJ;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000046.1 1 2802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000046.1 RefSeq region 1 2802 . + . ID=NZ_PJUQ01000046.1:1..2802;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000046.1 RefSeq gene 1 2802 . - . ID=gene-CYJ02_RS13170;Name=CYJ02_RS13170;end_range=2802,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13170;old_locus_tag=CYJ02_11935;partial=true;start_range=.,1 NZ_PJUQ01000046.1 Protein Homology CDS 1 2802 . - 2 ID=cds-WP_470418344.1;Parent=gene-CYJ02_RS13170;Dbxref=GenBank:WP_470418344.1;Name=WP_470418344.1;end_range=2802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501439.1;locus_tag=CYJ02_RS13170;partial=true;product=hypothetical protein;protein_id=WP_470418344.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000047.1 1 10492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000047.1 RefSeq region 1 10492 . + . ID=NZ_PJUQ01000047.1:1..10492;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000047.1 RefSeq pseudogene 1 409 . - . ID=gene-CYJ02_RS12625;Name=CYJ02_RS12625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12625;old_locus_tag=CYJ02_11940;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 1 409 . - 0 ID=cds-CYJ02_RS12625;Parent=gene-CYJ02_RS12625;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 413 1141 . - . ID=gene-CYJ02_RS11945;Name=CYJ02_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11945;old_locus_tag=CYJ02_11945 NZ_PJUQ01000047.1 Protein Homology CDS 413 1141 . - 0 ID=cds-WP_096533472.1;Parent=gene-CYJ02_RS11945;Dbxref=GenBank:WP_096533472.1;Name=WP_096533472.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ02_RS11945;product=ABC transporter ATP-binding protein;protein_id=WP_096533472.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 1134 1958 . - . ID=gene-CYJ02_RS11950;Name=CYJ02_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11950;old_locus_tag=CYJ02_11950 NZ_PJUQ01000047.1 Protein Homology CDS 1134 1958 . - 0 ID=cds-WP_096533471.1;Parent=gene-CYJ02_RS11950;Dbxref=GenBank:WP_096533471.1;Name=WP_096533471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025394.7;locus_tag=CYJ02_RS11950;product=thiopeptide-type bacteriocin biosynthesis protein;protein_id=WP_096533471.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 1955 4249 . - . ID=gene-CYJ02_RS11955;Name=CYJ02_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11955;old_locus_tag=CYJ02_11955 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 1955 4249 . - 0 ID=cds-WP_096533470.1;Parent=gene-CYJ02_RS11955;Dbxref=GenBank:WP_096533470.1;Name=WP_096533470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11955;product=hypothetical protein;protein_id=WP_096533470.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 4231 5313 . - . ID=gene-CYJ02_RS11960;Name=CYJ02_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11960;old_locus_tag=CYJ02_11960 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 4231 5313 . - 0 ID=cds-WP_101431708.1;Parent=gene-CYJ02_RS11960;Dbxref=GenBank:WP_101431708.1;Name=WP_101431708.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11960;product=site-2 protease family protein;protein_id=WP_101431708.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 5363 5551 . - . ID=gene-CYJ02_RS13135;Name=CYJ02_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13135 NZ_PJUQ01000047.1 Protein Homology CDS 5363 5551 . - 0 ID=cds-WP_157929442.1;Parent=gene-CYJ02_RS13135;Dbxref=GenBank:WP_157929442.1;Name=WP_157929442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033482.1;locus_tag=CYJ02_RS13135;product=thiocillin family RiPP;protein_id=WP_157929442.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 5568 5753 . - . ID=gene-CYJ02_RS13140;Name=CYJ02_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13140 NZ_PJUQ01000047.1 Protein Homology CDS 5568 5753 . - 0 ID=cds-WP_103866862.1;Parent=gene-CYJ02_RS13140;Dbxref=GenBank:WP_103866862.1;Name=WP_103866862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033482.1;locus_tag=CYJ02_RS13140;product=thiocillin family RiPP;protein_id=WP_103866862.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 5771 5971 . - . ID=gene-CYJ02_RS11970;Name=CYJ02_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11970;old_locus_tag=CYJ02_11970 NZ_PJUQ01000047.1 Protein Homology CDS 5771 5971 . - 0 ID=cds-WP_096533467.1;Parent=gene-CYJ02_RS11970;Dbxref=GenBank:WP_096533467.1;Name=WP_096533467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033482.1;locus_tag=CYJ02_RS11970;product=thiocillin family RiPP;protein_id=WP_096533467.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 5968 6582 . - . ID=gene-CYJ02_RS11975;Name=CYJ02_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11975;old_locus_tag=CYJ02_11975 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 5968 6582 . - 0 ID=cds-WP_096533466.1;Parent=gene-CYJ02_RS11975;Dbxref=GenBank:WP_096533466.1;Name=WP_096533466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11975;product=hypothetical protein;protein_id=WP_096533466.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 6586 8085 . - . ID=gene-CYJ02_RS11980;Name=CYJ02_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11980;old_locus_tag=CYJ02_11980 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 6586 8085 . - 0 ID=cds-WP_096533465.1;Parent=gene-CYJ02_RS11980;Dbxref=GenBank:WP_096533465.1;Name=WP_096533465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11980;product=nitroreductase family protein;protein_id=WP_096533465.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 8103 8675 . - . ID=gene-CYJ02_RS11985;Name=CYJ02_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11985;old_locus_tag=CYJ02_11985 NZ_PJUQ01000047.1 GeneMarkS-2+ CDS 8103 8675 . - 0 ID=cds-WP_096533464.1;Parent=gene-CYJ02_RS11985;Dbxref=GenBank:WP_096533464.1;Name=WP_096533464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS11985;product=hypothetical protein;protein_id=WP_096533464.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 8688 9986 . - . ID=gene-CYJ02_RS11990;Name=CYJ02_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS11990;old_locus_tag=CYJ02_11990 NZ_PJUQ01000047.1 Protein Homology CDS 8688 9986 . - 0 ID=cds-WP_096533463.1;Parent=gene-CYJ02_RS11990;Dbxref=GenBank:WP_096533463.1;Name=WP_096533463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03604.1;locus_tag=CYJ02_RS11990;product=YcaO-like family protein;protein_id=WP_096533463.1;transl_table=11 NZ_PJUQ01000047.1 RefSeq gene 10096 10263 . + . ID=gene-CYJ02_RS12585;Name=CYJ02_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12585 NZ_PJUQ01000047.1 Protein Homology CDS 10096 10263 . + 0 ID=cds-WP_168432706.1;Parent=gene-CYJ02_RS12585;Dbxref=GenBank:WP_168432706.1;Name=WP_168432706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149890.1;locus_tag=CYJ02_RS12585;product=hypothetical protein;protein_id=WP_168432706.1;transl_table=11 ##sequence-region NZ_PJUQ01000048.1 1 6711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000048.1 RefSeq region 1 6711 . + . ID=NZ_PJUQ01000048.1:1..6711;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000048.1 RefSeq pseudogene 1 232 . - . ID=gene-CYJ02_RS13145;Name=CYJ02_RS13145;end_range=232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13145;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000048.1 Protein Homology CDS 1 232 . - 0 ID=cds-CYJ02_RS13145;Parent=gene-CYJ02_RS13145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=232,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_336253575.1;locus_tag=CYJ02_RS13145;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 315 1169 . - . ID=gene-CYJ02_RS12000;Name=CYJ02_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12000;old_locus_tag=CYJ02_12000 NZ_PJUQ01000048.1 Protein Homology CDS 315 1169 . - 0 ID=cds-WP_101431709.1;Parent=gene-CYJ02_RS12000;Dbxref=GenBank:WP_101431709.1;Name=WP_101431709.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614116.1;locus_tag=CYJ02_RS12000;product=helix-turn-helix domain-containing protein;protein_id=WP_101431709.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 1811 2254 . + . ID=gene-CYJ02_RS12005;Name=CYJ02_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12005;old_locus_tag=CYJ02_12005 NZ_PJUQ01000048.1 GeneMarkS-2+ CDS 1811 2254 . + 0 ID=cds-WP_041614826.1;Parent=gene-CYJ02_RS12005;Dbxref=GenBank:WP_041614826.1;Name=WP_041614826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12005;product=hypothetical protein;protein_id=WP_041614826.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 2478 3044 . + . ID=gene-CYJ02_RS12010;Name=CYJ02_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12010;old_locus_tag=CYJ02_12010 NZ_PJUQ01000048.1 Protein Homology CDS 2478 3044 . + 0 ID=cds-WP_101431710.1;Parent=gene-CYJ02_RS12010;Dbxref=GenBank:WP_101431710.1;Name=WP_101431710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614113.1;locus_tag=CYJ02_RS12010;product=CYTH domain-containing protein;protein_id=WP_101431710.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 3022 3564 . + . ID=gene-CYJ02_RS12015;Name=CYJ02_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12015;old_locus_tag=CYJ02_12015 NZ_PJUQ01000048.1 Protein Homology CDS 3022 3564 . + 0 ID=cds-WP_101431711.1;Parent=gene-CYJ02_RS12015;Dbxref=GenBank:WP_101431711.1;Name=WP_101431711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220298.1;locus_tag=CYJ02_RS12015;product=hypothetical protein;protein_id=WP_101431711.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 3627 3752 . + . ID=gene-CYJ02_RS12940;Name=CYJ02_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12940 NZ_PJUQ01000048.1 GeneMarkS-2+ CDS 3627 3752 . + 0 ID=cds-WP_257975747.1;Parent=gene-CYJ02_RS12940;Dbxref=GenBank:WP_257975747.1;Name=WP_257975747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12940;product=hypothetical protein;protein_id=WP_257975747.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 3830 4288 . + . ID=gene-CYJ02_RS12590;Name=CYJ02_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12590 NZ_PJUQ01000048.1 GeneMarkS-2+ CDS 3830 4288 . + 0 ID=cds-WP_198586556.1;Parent=gene-CYJ02_RS12590;Dbxref=GenBank:WP_198586556.1;Name=WP_198586556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12590;product=hypothetical protein;protein_id=WP_198586556.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 4622 5830 . + . ID=gene-CYJ02_RS12025;Name=CYJ02_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12025;old_locus_tag=CYJ02_12025 NZ_PJUQ01000048.1 Protein Homology CDS 4622 5830 . + 0 ID=cds-WP_101431712.1;Parent=gene-CYJ02_RS12025;Dbxref=GenBank:WP_101431712.1;Name=WP_101431712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614110.1;locus_tag=CYJ02_RS12025;product=MFS transporter;protein_id=WP_101431712.1;transl_table=11 NZ_PJUQ01000048.1 RefSeq gene 6013 6711 . + . ID=gene-CYJ02_RS12030;Name=CYJ02_RS12030;end_range=6711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12030;old_locus_tag=CYJ02_12030;partial=true NZ_PJUQ01000048.1 Protein Homology CDS 6013 6711 . + 0 ID=cds-WP_133121717.1;Parent=gene-CYJ02_RS12030;Dbxref=GenBank:WP_133121717.1;Name=WP_133121717.1;Ontology_term=GO:0055085,GO:0022857;end_range=6711,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729027.1;locus_tag=CYJ02_RS12030;partial=true;product=MFS transporter;protein_id=WP_133121717.1;transl_table=11 ##sequence-region NZ_PJUQ01000049.1 1 4081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000049.1 RefSeq region 1 4081 . + . ID=NZ_PJUQ01000049.1:1..4081;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000049.1 RefSeq gene 1 645 . + . ID=gene-CYJ02_RS12035;Name=CYJ02_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12035;old_locus_tag=CYJ02_12035;partial=true;start_range=.,1 NZ_PJUQ01000049.1 Protein Homology CDS 1 645 . + 0 ID=cds-WP_133121718.1;Parent=gene-CYJ02_RS12035;Dbxref=GenBank:WP_133121718.1;Name=WP_133121718.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670260.1;locus_tag=CYJ02_RS12035;partial=true;product=site-specific integrase;protein_id=WP_133121718.1;start_range=.,1;transl_table=11 NZ_PJUQ01000049.1 RefSeq gene 1239 1784 . - . ID=gene-CYJ02_RS12040;Name=CYJ02_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12040;old_locus_tag=CYJ02_12040 NZ_PJUQ01000049.1 Protein Homology CDS 1239 1784 . - 0 ID=cds-WP_015728540.1;Parent=gene-CYJ02_RS12040;Dbxref=GenBank:WP_015728540.1;Name=WP_015728540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176726.1;locus_tag=CYJ02_RS12040;product=hypothetical protein;protein_id=WP_015728540.1;transl_table=11 NZ_PJUQ01000049.1 RefSeq gene 2015 2212 . - . ID=gene-CYJ02_RS12045;Name=CYJ02_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12045;old_locus_tag=CYJ02_12045 NZ_PJUQ01000049.1 Protein Homology CDS 2015 2212 . - 0 ID=cds-WP_063279069.1;Parent=gene-CYJ02_RS12045;Dbxref=GenBank:WP_063279069.1;Name=WP_063279069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614892.1;locus_tag=CYJ02_RS12045;product=hypothetical protein;protein_id=WP_063279069.1;transl_table=11 NZ_PJUQ01000049.1 RefSeq gene 2452 2703 . - . ID=gene-CYJ02_RS12050;Name=CYJ02_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12050;old_locus_tag=CYJ02_12050 NZ_PJUQ01000049.1 GeneMarkS-2+ CDS 2452 2703 . - 0 ID=cds-WP_198586557.1;Parent=gene-CYJ02_RS12050;Dbxref=GenBank:WP_198586557.1;Name=WP_198586557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12050;product=hypothetical protein;protein_id=WP_198586557.1;transl_table=11 NZ_PJUQ01000049.1 RefSeq gene 2721 3506 . + . ID=gene-CYJ02_RS12055;Name=CYJ02_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12055;old_locus_tag=CYJ02_12055 NZ_PJUQ01000049.1 Protein Homology CDS 2721 3506 . + 0 ID=cds-WP_101431714.1;Parent=gene-CYJ02_RS12055;Dbxref=GenBank:WP_101431714.1;Name=WP_101431714.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819103.1;locus_tag=CYJ02_RS12055;product=helix-turn-helix domain-containing protein;protein_id=WP_101431714.1;transl_table=11 NZ_PJUQ01000049.1 RefSeq gene 3590 4081 . + . ID=gene-CYJ02_RS12060;Name=CYJ02_RS12060;end_range=4081,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12060;old_locus_tag=CYJ02_12060;partial=true NZ_PJUQ01000049.1 Protein Homology CDS 3590 4081 . + 0 ID=cds-WP_198586558.1;Parent=gene-CYJ02_RS12060;Dbxref=GenBank:WP_198586558.1;Name=WP_198586558.1;Ontology_term=GO:0015074,GO:0003677;end_range=4081,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ02_RS12060;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_198586558.1;transl_table=11 ##sequence-region NZ_PJUQ01000005.1 1 107142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000005.1 RefSeq region 1 107142 . + . ID=NZ_PJUQ01000005.1:1..107142;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000005.1 RefSeq pseudogene 1 303 . - . ID=gene-CYJ02_RS13005;Name=CYJ02_RS13005;end_range=303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13005;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000005.1 Protein Homology CDS 1 303 . - 0 ID=cds-CYJ02_RS13005;Parent=gene-CYJ02_RS13005;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=303,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ02_RS13005;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 526 1392 . - . ID=gene-CYJ02_RS03575;Name=CYJ02_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03575;old_locus_tag=CYJ02_03575 NZ_PJUQ01000005.1 Protein Homology CDS 526 1392 . - 0 ID=cds-WP_063278643.1;Parent=gene-CYJ02_RS03575;Dbxref=GenBank:WP_063278643.1;Name=WP_063278643.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728626.1;locus_tag=CYJ02_RS03575;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_063278643.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 1554 2027 . - . ID=gene-CYJ02_RS03580;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03580;old_locus_tag=CYJ02_03580 NZ_PJUQ01000005.1 Protein Homology CDS 1554 2027 . - 0 ID=cds-WP_014614733.1;Parent=gene-CYJ02_RS03580;Dbxref=GenBank:WP_014614733.1;Name=WP_014614733.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614733.1;locus_tag=CYJ02_RS03580;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014614733.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 2097 2720 . + . ID=gene-CYJ02_RS03585;Name=CYJ02_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03585;old_locus_tag=CYJ02_03585 NZ_PJUQ01000005.1 Protein Homology CDS 2097 2720 . + 0 ID=cds-WP_014614734.1;Parent=gene-CYJ02_RS03585;Dbxref=GenBank:WP_014614734.1;Name=WP_014614734.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614734.1;locus_tag=CYJ02_RS03585;product=deoxynucleoside kinase;protein_id=WP_014614734.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 2707 3372 . + . ID=gene-CYJ02_RS03590;Name=CYJ02_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03590;old_locus_tag=CYJ02_03590 NZ_PJUQ01000005.1 Protein Homology CDS 2707 3372 . + 0 ID=cds-WP_015728623.1;Parent=gene-CYJ02_RS03590;Dbxref=GenBank:WP_015728623.1;Name=WP_015728623.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728623.1;locus_tag=CYJ02_RS03590;product=deoxynucleoside kinase;protein_id=WP_015728623.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 3932 4630 . - . ID=gene-CYJ02_RS03595;Name=CYJ02_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03595;old_locus_tag=CYJ02_03595 NZ_PJUQ01000005.1 Protein Homology CDS 3932 4630 . - 0 ID=cds-WP_014614736.1;Parent=gene-CYJ02_RS03595;Dbxref=GenBank:WP_014614736.1;Name=WP_014614736.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614736.1;locus_tag=CYJ02_RS03595;product=HAD family hydrolase;protein_id=WP_014614736.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 4868 5860 . + . ID=gene-CYJ02_RS03600;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=CYJ02_RS03600;old_locus_tag=CYJ02_03600 NZ_PJUQ01000005.1 Protein Homology CDS 4868 5860 . + 0 ID=cds-WP_014614737.1;Parent=gene-CYJ02_RS03600;Dbxref=GenBank:WP_014614737.1;Name=WP_014614737.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614737.1;locus_tag=CYJ02_RS03600;product=sphingomyelin phosphodiesterase;protein_id=WP_014614737.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 6571 7653 . - . ID=gene-CYJ02_RS03605;Name=CYJ02_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03605;old_locus_tag=CYJ02_03605 NZ_PJUQ01000005.1 Protein Homology CDS 6571 7653 . - 0 ID=cds-WP_014614738.1;Parent=gene-CYJ02_RS03605;Dbxref=GenBank:WP_014614738.1;Name=WP_014614738.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166637.1;locus_tag=CYJ02_RS03605;product=branched-chain amino acid aminotransferase;protein_id=WP_014614738.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 7779 9398 . - . ID=gene-CYJ02_RS03610;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=CYJ02_RS03610;old_locus_tag=CYJ02_03610 NZ_PJUQ01000005.1 Protein Homology CDS 7779 9398 . - 0 ID=cds-WP_101431390.1;Parent=gene-CYJ02_RS03610;Dbxref=GenBank:WP_101431390.1;Name=WP_101431390.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478735.1;locus_tag=CYJ02_RS03610;product=ribosomal protection-like ABC-F family protein;protein_id=WP_101431390.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 9554 10306 . - . ID=gene-CYJ02_RS03615;Name=CYJ02_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03615;old_locus_tag=CYJ02_03615 NZ_PJUQ01000005.1 Protein Homology CDS 9554 10306 . - 0 ID=cds-WP_101431391.1;Parent=gene-CYJ02_RS03615;Dbxref=GenBank:WP_101431391.1;Name=WP_101431391.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.7;locus_tag=CYJ02_RS03615;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_101431391.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 10311 11978 . - . ID=gene-CYJ02_RS03620;Name=CYJ02_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03620;old_locus_tag=CYJ02_03620 NZ_PJUQ01000005.1 GeneMarkS-2+ CDS 10311 11978 . - 0 ID=cds-WP_101431392.1;Parent=gene-CYJ02_RS03620;Dbxref=GenBank:WP_101431392.1;Name=WP_101431392.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS03620;product=gluzincin family metallopeptidase;protein_id=WP_101431392.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 11981 13258 . - . ID=gene-CYJ02_RS03625;Name=CYJ02_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03625;old_locus_tag=CYJ02_03625 NZ_PJUQ01000005.1 GeneMarkS-2+ CDS 11981 13258 . - 0 ID=cds-WP_101431393.1;Parent=gene-CYJ02_RS03625;Dbxref=GenBank:WP_101431393.1;Name=WP_101431393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS03625;product=periplasmic substrate-binding domain-containing protein;protein_id=WP_101431393.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 13255 14172 . - . ID=gene-CYJ02_RS03630;Name=CYJ02_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03630;old_locus_tag=CYJ02_03630 NZ_PJUQ01000005.1 Protein Homology CDS 13255 14172 . - 0 ID=cds-WP_101431394.1;Parent=gene-CYJ02_RS03630;Dbxref=GenBank:WP_101431394.1;Name=WP_101431394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013094.7;locus_tag=CYJ02_RS03630;product=ThiF family adenylyltransferase;protein_id=WP_101431394.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 14453 15709 . + . ID=gene-CYJ02_RS03635;Name=CYJ02_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03635;old_locus_tag=CYJ02_03635 NZ_PJUQ01000005.1 Protein Homology CDS 14453 15709 . + 0 ID=cds-WP_014614739.1;Parent=gene-CYJ02_RS03635;Dbxref=GenBank:WP_014614739.1;Name=WP_014614739.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614739.1;locus_tag=CYJ02_RS03635;product=MDR family MFS transporter;protein_id=WP_014614739.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq pseudogene 15895 16338 . - . ID=gene-CYJ02_RS03640;Name=tnpA;end_range=16338,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CYJ02_RS03640;old_locus_tag=CYJ02_03640;partial=true;pseudo=true NZ_PJUQ01000005.1 Protein Homology CDS 15895 16338 . - 0 ID=cds-CYJ02_RS03640;Parent=gene-CYJ02_RS03640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=16338,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ02_RS03640;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 16533 17492 . - . ID=gene-CYJ02_RS03645;Name=CYJ02_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03645;old_locus_tag=CYJ02_03645 NZ_PJUQ01000005.1 Protein Homology CDS 16533 17492 . - 0 ID=cds-WP_101431406.1;Parent=gene-CYJ02_RS03645;Dbxref=GenBank:WP_101431406.1;Name=WP_101431406.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=CYJ02_RS03645;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_101431406.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 17700 18890 . - . ID=gene-CYJ02_RS03650;Name=CYJ02_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03650;old_locus_tag=CYJ02_03650 NZ_PJUQ01000005.1 Protein Homology CDS 17700 18890 . - 0 ID=cds-WP_065520775.1;Parent=gene-CYJ02_RS03650;Dbxref=GenBank:WP_065520775.1;Name=WP_065520775.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=CYJ02_RS03650;product=glycine C-acetyltransferase;protein_id=WP_065520775.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 19000 20187 . + . ID=gene-CYJ02_RS03655;Name=CYJ02_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03655;old_locus_tag=CYJ02_03655 NZ_PJUQ01000005.1 Protein Homology CDS 19000 20187 . + 0 ID=cds-WP_014614742.1;Parent=gene-CYJ02_RS03655;Dbxref=GenBank:WP_014614742.1;Name=WP_014614742.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614742.1;locus_tag=CYJ02_RS03655;product=amidohydrolase;protein_id=WP_014614742.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 20773 21477 . + . ID=gene-CYJ02_RS03660;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03660;old_locus_tag=CYJ02_03660 NZ_PJUQ01000005.1 Protein Homology CDS 20773 21477 . + 0 ID=cds-WP_037543937.1;Parent=gene-CYJ02_RS03660;Dbxref=GenBank:WP_037543937.1;Name=WP_037543937.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=CYJ02_RS03660;product=acetolactate decarboxylase;protein_id=WP_037543937.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 21590 22777 . - . ID=gene-CYJ02_RS03665;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CYJ02_RS03665;old_locus_tag=CYJ02_03665 NZ_PJUQ01000005.1 Protein Homology CDS 21590 22777 . - 0 ID=cds-WP_014614744.1;Parent=gene-CYJ02_RS03665;Dbxref=GenBank:WP_014614744.1;Name=WP_014614744.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166641.1;locus_tag=CYJ02_RS03665;product=elongation factor Tu;protein_id=WP_014614744.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 22959 25040 . - . ID=gene-CYJ02_RS03670;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03670;old_locus_tag=CYJ02_03670 NZ_PJUQ01000005.1 Protein Homology CDS 22959 25040 . - 0 ID=cds-WP_014614745.1;Parent=gene-CYJ02_RS03670;Dbxref=GenBank:WP_014614745.1;Name=WP_014614745.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=CYJ02_RS03670;product=elongation factor G;protein_id=WP_014614745.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 25183 25653 . - . ID=gene-CYJ02_RS03675;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CYJ02_RS03675;old_locus_tag=CYJ02_03675 NZ_PJUQ01000005.1 Protein Homology CDS 25183 25653 . - 0 ID=cds-WP_014614746.1;Parent=gene-CYJ02_RS03675;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CYJ02_RS03675;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 25734 26147 . - . ID=gene-CYJ02_RS03680;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CYJ02_RS03680;old_locus_tag=CYJ02_03680 NZ_PJUQ01000005.1 Protein Homology CDS 25734 26147 . - 0 ID=cds-WP_014614747.1;Parent=gene-CYJ02_RS03680;Dbxref=GenBank:WP_014614747.1;Name=WP_014614747.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=CYJ02_RS03680;product=30S ribosomal protein S12;protein_id=WP_014614747.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 26243 26497 . - . ID=gene-CYJ02_RS03685;Name=CYJ02_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03685;old_locus_tag=CYJ02_03685 NZ_PJUQ01000005.1 Protein Homology CDS 26243 26497 . - 0 ID=cds-WP_014614748.1;Parent=gene-CYJ02_RS03685;Dbxref=GenBank:WP_014614748.1;Name=WP_014614748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=CYJ02_RS03685;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_014614748.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 26675 30295 . - . ID=gene-CYJ02_RS03690;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CYJ02_RS03690;old_locus_tag=CYJ02_03690 NZ_PJUQ01000005.1 Protein Homology CDS 26675 30295 . - 0 ID=cds-WP_014614749.1;Parent=gene-CYJ02_RS03690;Dbxref=GenBank:WP_014614749.1;Name=WP_014614749.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=CYJ02_RS03690;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_014614749.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 30530 34084 . - . ID=gene-CYJ02_RS03695;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03695;old_locus_tag=CYJ02_03695 NZ_PJUQ01000005.1 Protein Homology CDS 30530 34084 . - 0 ID=cds-WP_014614750.1;Parent=gene-CYJ02_RS03695;Dbxref=GenBank:WP_014614750.1;Name=WP_014614750.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614750.1;locus_tag=CYJ02_RS03695;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_014614750.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 34297 34905 . - . ID=gene-CYJ02_RS03700;Name=CYJ02_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03700;old_locus_tag=CYJ02_03700 NZ_PJUQ01000005.1 Protein Homology CDS 34297 34905 . - 0 ID=cds-WP_014614751.1;Parent=gene-CYJ02_RS03700;Dbxref=GenBank:WP_014614751.1;Name=WP_014614751.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614751.1;locus_tag=CYJ02_RS03700;product=class I SAM-dependent methyltransferase;protein_id=WP_014614751.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 34983 35348 . - . ID=gene-CYJ02_RS03705;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CYJ02_RS03705;old_locus_tag=CYJ02_03705 NZ_PJUQ01000005.1 Protein Homology CDS 34983 35348 . - 0 ID=cds-WP_014614752.1;Parent=gene-CYJ02_RS03705;Dbxref=GenBank:WP_014614752.1;Name=WP_014614752.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CYJ02_RS03705;product=50S ribosomal protein L7/L12;protein_id=WP_014614752.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 35389 35889 . - . ID=gene-CYJ02_RS03710;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CYJ02_RS03710;old_locus_tag=CYJ02_03710 NZ_PJUQ01000005.1 Protein Homology CDS 35389 35889 . - 0 ID=cds-WP_014614753.1;Parent=gene-CYJ02_RS03710;Dbxref=GenBank:WP_014614753.1;Name=WP_014614753.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=CYJ02_RS03710;product=50S ribosomal protein L10;protein_id=WP_014614753.1;transl_table=11 NZ_PJUQ01000005.1 cmsearch sequence_feature 35939 36079 . - . ID=id-NZ_PJUQ01000005.1:35939..36079;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000005.1 RefSeq gene 36178 36873 . - . ID=gene-CYJ02_RS03715;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03715;old_locus_tag=CYJ02_03715 NZ_PJUQ01000005.1 Protein Homology CDS 36178 36873 . - 0 ID=cds-WP_014614754.1;Parent=gene-CYJ02_RS03715;Dbxref=GenBank:WP_014614754.1;Name=WP_014614754.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CYJ02_RS03715;product=50S ribosomal protein L1;protein_id=WP_014614754.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 37065 37487 . - . ID=gene-CYJ02_RS03720;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CYJ02_RS03720;old_locus_tag=CYJ02_03720 NZ_PJUQ01000005.1 Protein Homology CDS 37065 37487 . - 0 ID=cds-WP_014614755.1;Parent=gene-CYJ02_RS03720;Dbxref=GenBank:WP_014614755.1;Name=WP_014614755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CYJ02_RS03720;product=50S ribosomal protein L11;protein_id=WP_014614755.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 37652 38200 . - . ID=gene-CYJ02_RS03725;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CYJ02_RS03725;old_locus_tag=CYJ02_03725 NZ_PJUQ01000005.1 Protein Homology CDS 37652 38200 . - 0 ID=cds-WP_014614756.1;Parent=gene-CYJ02_RS03725;Dbxref=GenBank:WP_014614756.1;Name=WP_014614756.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CYJ02_RS03725;product=transcription termination/antitermination protein NusG;protein_id=WP_014614756.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 38219 38398 . - . ID=gene-CYJ02_RS03730;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CYJ02_RS03730;old_locus_tag=CYJ02_03730 NZ_PJUQ01000005.1 Protein Homology CDS 38219 38398 . - 0 ID=cds-WP_014614757.1;Parent=gene-CYJ02_RS03730;Dbxref=GenBank:WP_014614757.1;Name=WP_014614757.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=CYJ02_RS03730;product=preprotein translocase subunit SecE;protein_id=WP_014614757.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 38416 38559 . - . ID=gene-CYJ02_RS03735;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ02_RS03735;old_locus_tag=CYJ02_03735 NZ_PJUQ01000005.1 Protein Homology CDS 38416 38559 . - 0 ID=cds-WP_075773636.1;Parent=gene-CYJ02_RS03735;Dbxref=GenBank:WP_075773636.1;Name=WP_075773636.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=CYJ02_RS03735;product=50S ribosomal protein L33;protein_id=WP_075773636.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 38631 39203 . - . ID=gene-CYJ02_RS03740;Name=CYJ02_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03740;old_locus_tag=CYJ02_03740 NZ_PJUQ01000005.1 Protein Homology CDS 38631 39203 . - 0 ID=cds-WP_037543938.1;Parent=gene-CYJ02_RS03740;Dbxref=GenBank:WP_037543938.1;Name=WP_037543938.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728609.1;locus_tag=CYJ02_RS03740;product=RNA polymerase sigma factor;protein_id=WP_037543938.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 39280 39804 . - . ID=gene-CYJ02_RS03745;Name=CYJ02_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03745;old_locus_tag=CYJ02_03745 NZ_PJUQ01000005.1 Protein Homology CDS 39280 39804 . - 0 ID=cds-WP_031253855.1;Parent=gene-CYJ02_RS03745;Dbxref=GenBank:WP_031253855.1;Name=WP_031253855.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424292.1;locus_tag=CYJ02_RS03745;product=NYN domain-containing protein;protein_id=WP_031253855.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 39808 40557 . - . ID=gene-CYJ02_RS03750;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03750;old_locus_tag=CYJ02_03750 NZ_PJUQ01000005.1 Protein Homology CDS 39808 40557 . - 0 ID=cds-WP_037543941.1;Parent=gene-CYJ02_RS03750;Dbxref=GenBank:WP_037543941.1;Name=WP_037543941.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=CYJ02_RS03750;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_037543941.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 40563 40964 . - . ID=gene-CYJ02_RS03755;Name=CYJ02_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03755;old_locus_tag=CYJ02_03755 NZ_PJUQ01000005.1 Protein Homology CDS 40563 40964 . - 0 ID=cds-WP_014614762.1;Parent=gene-CYJ02_RS03755;Dbxref=GenBank:WP_014614762.1;Name=WP_014614762.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=CYJ02_RS03755;product=Mini-ribonuclease 3;protein_id=WP_014614762.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 40957 42357 . - . ID=gene-CYJ02_RS03760;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03760;old_locus_tag=CYJ02_03760 NZ_PJUQ01000005.1 Protein Homology CDS 40957 42357 . - 0 ID=cds-WP_014614763.1;Parent=gene-CYJ02_RS03760;Dbxref=GenBank:WP_014614763.1;Name=WP_014614763.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=CYJ02_RS03760;product=cysteine--tRNA ligase;protein_id=WP_014614763.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 42341 43006 . - . ID=gene-CYJ02_RS03765;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CYJ02_RS03765;old_locus_tag=CYJ02_03765 NZ_PJUQ01000005.1 Protein Homology CDS 42341 43006 . - 0 ID=cds-WP_172425792.1;Parent=gene-CYJ02_RS03765;Dbxref=GenBank:WP_172425792.1;Name=WP_172425792.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723047.1;locus_tag=CYJ02_RS03765;product=serine O-acetyltransferase;protein_id=WP_172425792.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 43394 44848 . - . ID=gene-CYJ02_RS03770;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CYJ02_RS03770;old_locus_tag=CYJ02_03770 NZ_PJUQ01000005.1 Protein Homology CDS 43394 44848 . - 0 ID=cds-WP_037543943.1;Parent=gene-CYJ02_RS03770;Dbxref=GenBank:WP_037543943.1;Name=WP_037543943.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465549.1;locus_tag=CYJ02_RS03770;product=glutamate--tRNA ligase;protein_id=WP_037543943.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 44925 45404 . - . ID=gene-CYJ02_RS03775;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CYJ02_RS03775;old_locus_tag=CYJ02_03775 NZ_PJUQ01000005.1 Protein Homology CDS 44925 45404 . - 0 ID=cds-WP_101431396.1;Parent=gene-CYJ02_RS03775;Dbxref=GenBank:WP_101431396.1;Name=WP_101431396.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614766.1;locus_tag=CYJ02_RS03775;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_101431396.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 45397 46095 . - . ID=gene-CYJ02_RS03780;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CYJ02_RS03780;old_locus_tag=CYJ02_03780 NZ_PJUQ01000005.1 Protein Homology CDS 45397 46095 . - 0 ID=cds-WP_101431397.1;Parent=gene-CYJ02_RS03780;Dbxref=GenBank:WP_101431397.1;Name=WP_101431397.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=CYJ02_RS03780;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_101431397.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 46096 47157 . - . ID=gene-CYJ02_RS03785;Name=CYJ02_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03785;old_locus_tag=CYJ02_03785 NZ_PJUQ01000005.1 Protein Homology CDS 46096 47157 . - 0 ID=cds-WP_014614768.1;Parent=gene-CYJ02_RS03785;Dbxref=GenBank:WP_014614768.1;Name=WP_014614768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614768.1;locus_tag=CYJ02_RS03785;product=PIN/TRAM domain-containing protein;protein_id=WP_014614768.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 47176 48546 . - . ID=gene-CYJ02_RS03790;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CYJ02_RS03790;old_locus_tag=CYJ02_03790 NZ_PJUQ01000005.1 Protein Homology CDS 47176 48546 . - 0 ID=cds-WP_014614769.1;Parent=gene-CYJ02_RS03790;Dbxref=GenBank:WP_014614769.1;Name=WP_014614769.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166689.1;locus_tag=CYJ02_RS03790;product=DNA repair protein RadA;protein_id=WP_014614769.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 48939 49685 . - . ID=gene-CYJ02_RS03795;Name=CYJ02_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03795;old_locus_tag=CYJ02_03795 NZ_PJUQ01000005.1 Protein Homology CDS 48939 49685 . - 0 ID=cds-WP_015728605.1;Parent=gene-CYJ02_RS03795;Dbxref=GenBank:WP_015728605.1;Name=WP_015728605.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728605.1;locus_tag=CYJ02_RS03795;product=ABC transporter permease;protein_id=WP_015728605.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 49672 50376 . - . ID=gene-CYJ02_RS03800;Name=CYJ02_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03800;old_locus_tag=CYJ02_03800 NZ_PJUQ01000005.1 Protein Homology CDS 49672 50376 . - 0 ID=cds-WP_014614771.1;Parent=gene-CYJ02_RS03800;Dbxref=GenBank:WP_014614771.1;Name=WP_014614771.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614771.1;locus_tag=CYJ02_RS03800;product=ABC transporter ATP-binding protein;protein_id=WP_014614771.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 50391 51350 . - . ID=gene-CYJ02_RS03805;Name=CYJ02_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03805;old_locus_tag=CYJ02_03805 NZ_PJUQ01000005.1 Protein Homology CDS 50391 51350 . - 0 ID=cds-WP_233511255.1;Parent=gene-CYJ02_RS03805;Dbxref=GenBank:WP_233511255.1;Name=WP_233511255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614772.1;locus_tag=CYJ02_RS03805;product=hypothetical protein;protein_id=WP_233511255.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 51350 52162 . - . ID=gene-CYJ02_RS03810;Name=CYJ02_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03810;old_locus_tag=CYJ02_03810 NZ_PJUQ01000005.1 Protein Homology CDS 51350 52162 . - 0 ID=cds-WP_037543946.1;Parent=gene-CYJ02_RS03810;Dbxref=GenBank:WP_037543946.1;Name=WP_037543946.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614773.1;locus_tag=CYJ02_RS03810;product=SagB family peptide dehydrogenase;protein_id=WP_037543946.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 52182 53402 . - . ID=gene-CYJ02_RS03815;Name=CYJ02_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03815;old_locus_tag=CYJ02_03815 NZ_PJUQ01000005.1 Protein Homology CDS 52182 53402 . - 0 ID=cds-WP_065354621.1;Parent=gene-CYJ02_RS03815;Dbxref=GenBank:WP_065354621.1;Name=WP_065354621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614774.1;locus_tag=CYJ02_RS03815;product=YcaO-like family protein;protein_id=WP_065354621.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 53399 54250 . - . ID=gene-CYJ02_RS03820;Name=CYJ02_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03820;old_locus_tag=CYJ02_03820 NZ_PJUQ01000005.1 Protein Homology CDS 53399 54250 . - 0 ID=cds-WP_037543948.1;Parent=gene-CYJ02_RS03820;Dbxref=GenBank:WP_037543948.1;Name=WP_037543948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728602.1;locus_tag=CYJ02_RS03820;product=hypothetical protein;protein_id=WP_037543948.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 54931 57390 . - . ID=gene-CYJ02_RS03825;Name=CYJ02_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03825;old_locus_tag=CYJ02_03825 NZ_PJUQ01000005.1 Protein Homology CDS 54931 57390 . - 0 ID=cds-WP_014614776.1;Parent=gene-CYJ02_RS03825;Dbxref=GenBank:WP_014614776.1;Name=WP_014614776.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499078.1;locus_tag=CYJ02_RS03825;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_014614776.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 57406 58410 . - . ID=gene-CYJ02_RS03830;Name=CYJ02_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03830;old_locus_tag=CYJ02_03830 NZ_PJUQ01000005.1 Protein Homology CDS 57406 58410 . - 0 ID=cds-WP_101431398.1;Parent=gene-CYJ02_RS03830;Dbxref=GenBank:WP_101431398.1;Name=WP_101431398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169090.1;locus_tag=CYJ02_RS03830;product=protein arginine kinase;protein_id=WP_101431398.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 58400 58930 . - . ID=gene-CYJ02_RS03835;Name=CYJ02_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03835;old_locus_tag=CYJ02_03835 NZ_PJUQ01000005.1 Protein Homology CDS 58400 58930 . - 0 ID=cds-WP_014614778.1;Parent=gene-CYJ02_RS03835;Dbxref=GenBank:WP_014614778.1;Name=WP_014614778.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169091.1;locus_tag=CYJ02_RS03835;product=UvrB/UvrC motif-containing protein;protein_id=WP_014614778.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 58944 59405 . - . ID=gene-CYJ02_RS03840;Name=CYJ02_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03840;old_locus_tag=CYJ02_03840 NZ_PJUQ01000005.1 Protein Homology CDS 58944 59405 . - 0 ID=cds-WP_014614779.1;Parent=gene-CYJ02_RS03840;Dbxref=GenBank:WP_014614779.1;Name=WP_014614779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CYJ02_RS03840;product=CtsR family transcriptional regulator;protein_id=WP_014614779.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 59570 60775 . + . ID=gene-CYJ02_RS03845;Name=CYJ02_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03845;old_locus_tag=CYJ02_03845 NZ_PJUQ01000005.1 Protein Homology CDS 59570 60775 . + 0 ID=cds-WP_014614780.1;Parent=gene-CYJ02_RS03845;Dbxref=GenBank:WP_014614780.1;Name=WP_014614780.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CYJ02_RS03845;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014614780.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 61258 62016 . + . ID=gene-CYJ02_RS03850;Name=CYJ02_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03850;old_locus_tag=CYJ02_03850 NZ_PJUQ01000005.1 Protein Homology CDS 61258 62016 . + 0 ID=cds-WP_101431399.1;Parent=gene-CYJ02_RS03850;Dbxref=GenBank:WP_101431399.1;Name=WP_101431399.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614782.1;locus_tag=CYJ02_RS03850;product=trypsin-like serine peptidase;protein_id=WP_101431399.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 62161 62718 . - . ID=gene-CYJ02_RS03855;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=CYJ02_RS03855;old_locus_tag=CYJ02_03855 NZ_PJUQ01000005.1 Protein Homology CDS 62161 62718 . - 0 ID=cds-WP_014614783.1;Parent=gene-CYJ02_RS03855;Dbxref=GenBank:WP_014614783.1;Name=WP_014614783.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614783.1;locus_tag=CYJ02_RS03855;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_014614783.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 62720 63607 . - . ID=gene-CYJ02_RS03860;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03860;old_locus_tag=CYJ02_03860 NZ_PJUQ01000005.1 Protein Homology CDS 62720 63607 . - 0 ID=cds-WP_014614784.1;Parent=gene-CYJ02_RS03860;Dbxref=GenBank:WP_014614784.1;Name=WP_014614784.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CYJ02_RS03860;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_014614784.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 63717 65126 . + . ID=gene-CYJ02_RS03865;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CYJ02_RS03865;old_locus_tag=CYJ02_03865 NZ_PJUQ01000005.1 Protein Homology CDS 63717 65126 . + 0 ID=cds-WP_015728599.1;Parent=gene-CYJ02_RS03865;Dbxref=GenBank:WP_015728599.1;Name=WP_015728599.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614785.1;locus_tag=CYJ02_RS03865;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_015728599.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 65181 67109 . - . ID=gene-CYJ02_RS03870;Name=CYJ02_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03870;old_locus_tag=CYJ02_03870 NZ_PJUQ01000005.1 Protein Homology CDS 65181 67109 . - 0 ID=cds-WP_015728598.1;Parent=gene-CYJ02_RS03870;Dbxref=GenBank:WP_015728598.1;Name=WP_015728598.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=CYJ02_RS03870;product=FUSC family protein;protein_id=WP_015728598.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 67197 67311 . - . ID=gene-CYJ02_RS03875;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ02_RS03875;old_locus_tag=CYJ02_03875 NZ_PJUQ01000005.1 cmsearch rRNA 67197 67311 . - . ID=rna-CYJ02_RS03875;Parent=gene-CYJ02_RS03875;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS03875;product=5S ribosomal RNA NZ_PJUQ01000005.1 cmsearch exon 67197 67311 . - . ID=exon-CYJ02_RS03875-1;Parent=rna-CYJ02_RS03875;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS03875;product=5S ribosomal RNA NZ_PJUQ01000005.1 RefSeq gene 67723 69210 . - . ID=gene-CYJ02_RS03880;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03880;old_locus_tag=CYJ02_03880 NZ_PJUQ01000005.1 Protein Homology CDS 67723 69210 . - 0 ID=cds-WP_015728597.1;Parent=gene-CYJ02_RS03880;Dbxref=GenBank:WP_015728597.1;Name=WP_015728597.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499070.1;locus_tag=CYJ02_RS03880;product=lysine--tRNA ligase;protein_id=WP_015728597.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 69233 70225 . - . ID=gene-CYJ02_RS03885;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03885;old_locus_tag=CYJ02_03885 NZ_PJUQ01000005.1 Protein Homology CDS 69233 70225 . - 0 ID=cds-WP_014614788.1;Parent=gene-CYJ02_RS03885;Dbxref=GenBank:WP_014614788.1;Name=WP_014614788.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=CYJ02_RS03885;product=tRNA dihydrouridine synthase DusB;protein_id=WP_014614788.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 70270 70755 . - . ID=gene-CYJ02_RS03890;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CYJ02_RS03890;old_locus_tag=CYJ02_03890 NZ_PJUQ01000005.1 Protein Homology CDS 70270 70755 . - 0 ID=cds-WP_020220407.1;Parent=gene-CYJ02_RS03890;Dbxref=GenBank:WP_020220407.1;Name=WP_020220407.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165002.1;locus_tag=CYJ02_RS03890;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_020220407.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 70748 71119 . - . ID=gene-CYJ02_RS03895;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CYJ02_RS03895;old_locus_tag=CYJ02_03895 NZ_PJUQ01000005.1 Protein Homology CDS 70748 71119 . - 0 ID=cds-WP_014614790.1;Parent=gene-CYJ02_RS03895;Dbxref=GenBank:WP_014614790.1;Name=WP_014614790.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614790.1;locus_tag=CYJ02_RS03895;product=dihydroneopterin aldolase;protein_id=WP_014614790.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 71109 71900 . - . ID=gene-CYJ02_RS03900;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CYJ02_RS03900;old_locus_tag=CYJ02_03900 NZ_PJUQ01000005.1 Protein Homology CDS 71109 71900 . - 0 ID=cds-WP_101431400.1;Parent=gene-CYJ02_RS03900;Dbxref=GenBank:WP_101431400.1;Name=WP_101431400.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=CYJ02_RS03900;product=dihydropteroate synthase;protein_id=WP_101431400.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 72122 73051 . - . ID=gene-CYJ02_RS03905;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CYJ02_RS03905;old_locus_tag=CYJ02_03905 NZ_PJUQ01000005.1 Protein Homology CDS 72122 73051 . - 0 ID=cds-WP_014614792.1;Parent=gene-CYJ02_RS03905;Dbxref=GenBank:WP_014614792.1;Name=WP_014614792.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=CYJ02_RS03905;product=cysteine synthase A;protein_id=WP_014614792.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 73575 74459 . - . ID=gene-CYJ02_RS03910;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CYJ02_RS03910;old_locus_tag=CYJ02_03910 NZ_PJUQ01000005.1 Protein Homology CDS 73575 74459 . - 0 ID=cds-WP_014614793.1;Parent=gene-CYJ02_RS03910;Dbxref=GenBank:WP_014614793.1;Name=WP_014614793.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165006.1;locus_tag=CYJ02_RS03910;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014614793.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 74914 77028 . - . ID=gene-CYJ02_RS03915;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CYJ02_RS03915;old_locus_tag=CYJ02_03915 NZ_PJUQ01000005.1 Protein Homology CDS 74914 77028 . - 0 ID=cds-WP_014614794.1;Parent=gene-CYJ02_RS03915;Dbxref=GenBank:WP_014614794.1;Name=WP_014614794.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=CYJ02_RS03915;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_014614794.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 77144 77683 . - . ID=gene-CYJ02_RS03920;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CYJ02_RS03920;old_locus_tag=CYJ02_03920 NZ_PJUQ01000005.1 Protein Homology CDS 77144 77683 . - 0 ID=cds-WP_014614795.1;Parent=gene-CYJ02_RS03920;Dbxref=GenBank:WP_014614795.1;Name=WP_014614795.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=CYJ02_RS03920;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014614795.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 77673 78962 . - . ID=gene-CYJ02_RS03925;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CYJ02_RS03925;old_locus_tag=CYJ02_03925 NZ_PJUQ01000005.1 Protein Homology CDS 77673 78962 . - 0 ID=cds-WP_101431401.1;Parent=gene-CYJ02_RS03925;Dbxref=GenBank:WP_101431401.1;Name=WP_101431401.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220126.1;locus_tag=CYJ02_RS03925;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_101431401.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 79045 79422 . - . ID=gene-CYJ02_RS03930;Name=CYJ02_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03930;old_locus_tag=CYJ02_03930 NZ_PJUQ01000005.1 Protein Homology CDS 79045 79422 . - 0 ID=cds-WP_014614797.1;Parent=gene-CYJ02_RS03930;Dbxref=GenBank:WP_014614797.1;Name=WP_014614797.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=CYJ02_RS03930;product=S1 domain-containing RNA-binding protein;protein_id=WP_014614797.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 79562 79951 . - . ID=gene-CYJ02_RS03935;Name=CYJ02_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03935;old_locus_tag=CYJ02_03935 NZ_PJUQ01000005.1 Protein Homology CDS 79562 79951 . - 0 ID=cds-WP_014614798.1;Parent=gene-CYJ02_RS03935;Dbxref=GenBank:WP_014614798.1;Name=WP_014614798.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165010.1;locus_tag=CYJ02_RS03935;product=FtsB family cell division protein;protein_id=WP_014614798.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 79979 80236 . - . ID=gene-CYJ02_RS03940;Name=CYJ02_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03940;old_locus_tag=CYJ02_03940 NZ_PJUQ01000005.1 Protein Homology CDS 79979 80236 . - 0 ID=cds-WP_014614799.1;Parent=gene-CYJ02_RS03940;Dbxref=GenBank:WP_014614799.1;Name=WP_014614799.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169417.1;locus_tag=CYJ02_RS03940;product=RNA-binding S4 domain-containing protein;protein_id=WP_014614799.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 80226 81410 . - . ID=gene-CYJ02_RS03945;Name=CYJ02_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03945;old_locus_tag=CYJ02_03945 NZ_PJUQ01000005.1 Protein Homology CDS 80226 81410 . - 0 ID=cds-WP_014614800.1;Parent=gene-CYJ02_RS03945;Dbxref=GenBank:WP_014614800.1;Name=WP_014614800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614800.1;locus_tag=CYJ02_RS03945;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_014614800.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 81407 82939 . - . ID=gene-CYJ02_RS03950;Name=CYJ02_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03950;old_locus_tag=CYJ02_03950 NZ_PJUQ01000005.1 Protein Homology CDS 81407 82939 . - 0 ID=cds-WP_063279071.1;Parent=gene-CYJ02_RS03950;Dbxref=GenBank:WP_063279071.1;Name=WP_063279071.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=CYJ02_RS03950;product=oligosaccharide flippase family protein;protein_id=WP_063279071.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 82929 86432 . - . ID=gene-CYJ02_RS03955;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CYJ02_RS03955;old_locus_tag=CYJ02_03955 NZ_PJUQ01000005.1 Protein Homology CDS 82929 86432 . - 0 ID=cds-WP_370499020.1;Parent=gene-CYJ02_RS03955;Dbxref=GenBank:WP_370499020.1;Name=WP_370499020.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=CYJ02_RS03955;product=transcription-repair coupling factor;protein_id=WP_370499020.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 86438 87010 . - . ID=gene-CYJ02_RS03960;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CYJ02_RS03960;old_locus_tag=CYJ02_03960 NZ_PJUQ01000005.1 Protein Homology CDS 86438 87010 . - 0 ID=cds-WP_014614803.1;Parent=gene-CYJ02_RS03960;Dbxref=GenBank:WP_014614803.1;Name=WP_014614803.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426510.1;locus_tag=CYJ02_RS03960;product=aminoacyl-tRNA hydrolase;protein_id=WP_014614803.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 87470 88120 . - . ID=gene-CYJ02_RS03965;Name=CYJ02_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03965;old_locus_tag=CYJ02_03965 NZ_PJUQ01000005.1 Protein Homology CDS 87470 88120 . - 0 ID=cds-WP_014614804.1;Parent=gene-CYJ02_RS03965;Dbxref=GenBank:WP_014614804.1;Name=WP_014614804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614804.1;locus_tag=CYJ02_RS03965;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_014614804.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 88258 89223 . - . ID=gene-CYJ02_RS03970;Name=CYJ02_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03970;old_locus_tag=CYJ02_03970 NZ_PJUQ01000005.1 Protein Homology CDS 88258 89223 . - 0 ID=cds-WP_014614805.1;Parent=gene-CYJ02_RS03970;Dbxref=GenBank:WP_014614805.1;Name=WP_014614805.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CYJ02_RS03970;product=ribose-phosphate diphosphokinase;protein_id=WP_014614805.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 89299 90663 . - . ID=gene-CYJ02_RS03975;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CYJ02_RS03975;old_locus_tag=CYJ02_03975 NZ_PJUQ01000005.1 Protein Homology CDS 89299 90663 . - 0 ID=cds-WP_015728592.1;Parent=gene-CYJ02_RS03975;Dbxref=GenBank:WP_015728592.1;Name=WP_015728592.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=CYJ02_RS03975;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_015728592.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 90945 91259 . - . ID=gene-CYJ02_RS03980;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=CYJ02_RS03980;old_locus_tag=CYJ02_03980 NZ_PJUQ01000005.1 Protein Homology CDS 90945 91259 . - 0 ID=cds-WP_014614807.1;Parent=gene-CYJ02_RS03980;Dbxref=GenBank:WP_014614807.1;Name=WP_014614807.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614807.1;locus_tag=CYJ02_RS03980;product=septation regulator SpoVG;protein_id=WP_014614807.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 91338 91718 . - . ID=gene-CYJ02_RS03985;Name=CYJ02_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS03985;old_locus_tag=CYJ02_03985 NZ_PJUQ01000005.1 Protein Homology CDS 91338 91718 . - 0 ID=cds-WP_014614808.1;Parent=gene-CYJ02_RS03985;Dbxref=GenBank:WP_014614808.1;Name=WP_014614808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667755.1;locus_tag=CYJ02_RS03985;product=RidA family protein;protein_id=WP_014614808.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 91743 92564 . - . ID=gene-CYJ02_RS03990;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CYJ02_RS03990;old_locus_tag=CYJ02_03990 NZ_PJUQ01000005.1 Protein Homology CDS 91743 92564 . - 0 ID=cds-WP_014614809.1;Parent=gene-CYJ02_RS03990;Dbxref=GenBank:WP_014614809.1;Name=WP_014614809.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614809.1;locus_tag=CYJ02_RS03990;product=pur operon repressor;protein_id=WP_014614809.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 92586 93434 . - . ID=gene-CYJ02_RS03995;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CYJ02_RS03995;old_locus_tag=CYJ02_03995 NZ_PJUQ01000005.1 Protein Homology CDS 92586 93434 . - 0 ID=cds-WP_014614810.1;Parent=gene-CYJ02_RS03995;Dbxref=GenBank:WP_014614810.1;Name=WP_014614810.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=CYJ02_RS03995;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014614810.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 93826 94092 . - . ID=gene-CYJ02_RS04000;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=CYJ02_RS04000;old_locus_tag=CYJ02_04000 NZ_PJUQ01000005.1 Protein Homology CDS 93826 94092 . - 0 ID=cds-WP_014614811.1;Parent=gene-CYJ02_RS04000;Dbxref=GenBank:WP_014614811.1;Name=WP_014614811.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=CYJ02_RS04000;product=biofilm formation stimulator Veg;protein_id=WP_014614811.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 94192 95082 . - . ID=gene-CYJ02_RS04005;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04005;old_locus_tag=CYJ02_04005 NZ_PJUQ01000005.1 Protein Homology CDS 94192 95082 . - 0 ID=cds-WP_014614812.1;Parent=gene-CYJ02_RS04005;Dbxref=GenBank:WP_014614812.1;Name=WP_014614812.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=CYJ02_RS04005;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_014614812.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 95087 95626 . - . ID=gene-CYJ02_RS04010;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CYJ02_RS04010;old_locus_tag=CYJ02_04010 NZ_PJUQ01000005.1 Protein Homology CDS 95087 95626 . - 0 ID=cds-WP_063279132.1;Parent=gene-CYJ02_RS04010;Dbxref=GenBank:WP_063279132.1;Name=WP_063279132.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=CYJ02_RS04010;product=ribonuclease M5;protein_id=WP_063279132.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 95666 96433 . - . ID=gene-CYJ02_RS04015;Name=CYJ02_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04015;old_locus_tag=CYJ02_04015 NZ_PJUQ01000005.1 Protein Homology CDS 95666 96433 . - 0 ID=cds-WP_101431402.1;Parent=gene-CYJ02_RS04015;Dbxref=GenBank:WP_101431402.1;Name=WP_101431402.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614814.1;locus_tag=CYJ02_RS04015;product=TatD family hydrolase;protein_id=WP_101431402.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 96877 98850 . - . ID=gene-CYJ02_RS04020;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CYJ02_RS04020;old_locus_tag=CYJ02_04020 NZ_PJUQ01000005.1 Protein Homology CDS 96877 98850 . - 0 ID=cds-WP_014614815.1;Parent=gene-CYJ02_RS04020;Dbxref=GenBank:WP_014614815.1;Name=WP_014614815.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=CYJ02_RS04020;product=methionine--tRNA ligase;protein_id=WP_014614815.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 98941 99774 . - . ID=gene-CYJ02_RS04025;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CYJ02_RS04025;old_locus_tag=CYJ02_04025 NZ_PJUQ01000005.1 Protein Homology CDS 98941 99774 . - 0 ID=cds-WP_101431403.1;Parent=gene-CYJ02_RS04025;Dbxref=GenBank:WP_101431403.1;Name=WP_101431403.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166563.1;locus_tag=CYJ02_RS04025;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_101431403.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 99776 100024 . - . ID=gene-CYJ02_RS04030;Name=CYJ02_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04030;old_locus_tag=CYJ02_04030 NZ_PJUQ01000005.1 Protein Homology CDS 99776 100024 . - 0 ID=cds-WP_037543973.1;Parent=gene-CYJ02_RS04030;Dbxref=GenBank:WP_037543973.1;Name=WP_037543973.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276773.1;locus_tag=CYJ02_RS04030;product=GIY-YIG nuclease family protein;protein_id=WP_037543973.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 100017 100742 . - . ID=gene-CYJ02_RS04035;Name=CYJ02_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04035;old_locus_tag=CYJ02_04035 NZ_PJUQ01000005.1 Protein Homology CDS 100017 100742 . - 0 ID=cds-WP_014614818.1;Parent=gene-CYJ02_RS04035;Dbxref=GenBank:WP_014614818.1;Name=WP_014614818.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=CYJ02_RS04035;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014614818.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 100753 101118 . - . ID=gene-CYJ02_RS04040;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04040;old_locus_tag=CYJ02_04040 NZ_PJUQ01000005.1 Protein Homology CDS 100753 101118 . - 0 ID=cds-WP_015728589.1;Parent=gene-CYJ02_RS04040;Dbxref=GenBank:WP_015728589.1;Name=WP_015728589.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169136.1;locus_tag=CYJ02_RS04040;product=DNA replication initiation control protein YabA;protein_id=WP_015728589.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 101131 101934 . - . ID=gene-CYJ02_RS04045;Name=CYJ02_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04045;old_locus_tag=CYJ02_04045 NZ_PJUQ01000005.1 Protein Homology CDS 101131 101934 . - 0 ID=cds-WP_065354634.1;Parent=gene-CYJ02_RS04045;Dbxref=GenBank:WP_065354634.1;Name=WP_065354634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=CYJ02_RS04045;product=PSP1 domain-containing protein;protein_id=WP_065354634.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 101940 102872 . - . ID=gene-CYJ02_RS04050;Name=CYJ02_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04050;old_locus_tag=CYJ02_04050 NZ_PJUQ01000005.1 Protein Homology CDS 101940 102872 . - 0 ID=cds-WP_037543979.1;Parent=gene-CYJ02_RS04050;Dbxref=GenBank:WP_037543979.1;Name=WP_037543979.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=CYJ02_RS04050;product=DNA polymerase III subunit delta' C-terminal domain-containing protein;protein_id=WP_037543979.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 103116 103445 . - . ID=gene-CYJ02_RS04055;Name=CYJ02_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04055;old_locus_tag=CYJ02_04055 NZ_PJUQ01000005.1 Protein Homology CDS 103116 103445 . - 0 ID=cds-WP_014614822.1;Parent=gene-CYJ02_RS04055;Dbxref=GenBank:WP_014614822.1;Name=WP_014614822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CYJ02_RS04055;product=cyclic-di-AMP receptor;protein_id=WP_014614822.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 103515 104132 . - . ID=gene-CYJ02_RS04060;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CYJ02_RS04060;old_locus_tag=CYJ02_04060 NZ_PJUQ01000005.1 Protein Homology CDS 103515 104132 . - 0 ID=cds-WP_014614823.1;Parent=gene-CYJ02_RS04060;Dbxref=GenBank:WP_014614823.1;Name=WP_014614823.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614823.1;locus_tag=CYJ02_RS04060;product=dTMP kinase;protein_id=WP_014614823.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 104135 105475 . - . ID=gene-CYJ02_RS04065;Name=CYJ02_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04065;old_locus_tag=CYJ02_04065 NZ_PJUQ01000005.1 Protein Homology CDS 104135 105475 . - 0 ID=cds-WP_101431404.1;Parent=gene-CYJ02_RS04065;Dbxref=GenBank:WP_101431404.1;Name=WP_101431404.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=CYJ02_RS04065;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_101431404.1;transl_table=11 NZ_PJUQ01000005.1 RefSeq gene 105807 106217 . - . ID=gene-CYJ02_RS04070;Name=CYJ02_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04070;old_locus_tag=CYJ02_04070 NZ_PJUQ01000005.1 Protein Homology CDS 105807 106217 . - 0 ID=cds-WP_101431405.1;Parent=gene-CYJ02_RS04070;Dbxref=GenBank:WP_101431405.1;Name=WP_101431405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728586.1;locus_tag=CYJ02_RS04070;product=hypothetical protein;protein_id=WP_101431405.1;transl_table=11 ##sequence-region NZ_PJUQ01000050.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000050.1 RefSeq region 1 474 . + . ID=NZ_PJUQ01000050.1:1..474;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000050.1 RefSeq gene 1 474 . + . ID=gene-CYJ02_RS12445;Name=CYJ02_RS12445;end_range=474,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12445;old_locus_tag=CYJ02_12065;partial=true;start_range=.,1 NZ_PJUQ01000050.1 Protein Homology CDS 1 474 . + 2 ID=cds-WP_198586559.1;Parent=gene-CYJ02_RS12445;Dbxref=GenBank:WP_198586559.1;Name=WP_198586559.1;end_range=474,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038186.1;locus_tag=CYJ02_RS12445;partial=true;product=YPDG domain-containing protein;protein_id=WP_198586559.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000051.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000051.1 RefSeq region 1 705 . + . ID=NZ_PJUQ01000051.1:1..705;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000051.1 RefSeq gene 1 705 . - . ID=gene-CYJ02_RS12450;Name=CYJ02_RS12450;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12450;old_locus_tag=CYJ02_12070;partial=true;start_range=.,1 NZ_PJUQ01000051.1 Protein Homology CDS 1 705 . - 2 ID=cds-WP_198586560.1;Parent=gene-CYJ02_RS12450;Dbxref=GenBank:WP_198586560.1;Name=WP_198586560.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=CYJ02_RS12450;partial=true;product=YPDG domain-containing protein;protein_id=WP_198586560.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000052.1 1 963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000052.1 RefSeq region 1 963 . + . ID=NZ_PJUQ01000052.1:1..963;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000052.1 RefSeq gene 1 957 . + . ID=gene-CYJ02_RS12075;Name=CYJ02_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12075;old_locus_tag=CYJ02_12075;partial=true;start_range=.,1 NZ_PJUQ01000052.1 Protein Homology CDS 1 957 . + 0 ID=cds-WP_101431715.1;Parent=gene-CYJ02_RS12075;Dbxref=GenBank:WP_101431715.1;Name=WP_101431715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12075;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_101431715.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000053.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000053.1 RefSeq region 1 526 . + . ID=NZ_PJUQ01000053.1:1..526;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000053.1 RefSeq gene 364 526 . + . ID=gene-CYJ02_RS12595;Name=CYJ02_RS12595;end_range=526,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS12595;partial=true NZ_PJUQ01000053.1 cmsearch rRNA 364 526 . + . ID=rna-CYJ02_RS12595;Parent=gene-CYJ02_RS12595;Dbxref=RFAM:RF02541;end_range=526,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12595;partial=true;product=23S ribosomal RNA NZ_PJUQ01000053.1 cmsearch exon 364 526 . + . ID=exon-CYJ02_RS12595-1;Parent=rna-CYJ02_RS12595;Dbxref=RFAM:RF02541;end_range=526,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12595;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PJUQ01000054.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000054.1 RefSeq region 1 1117 . + . ID=NZ_PJUQ01000054.1:1..1117;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000054.1 RefSeq pseudogene 1 1117 . + . ID=gene-CYJ02_RS12865;Name=CYJ02_RS12865;end_range=1117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12865;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000054.1 Protein Homology CDS 1 1117 . + 0 ID=cds-CYJ02_RS12865;Parent=gene-CYJ02_RS12865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000055.1 1 1344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000055.1 RefSeq region 1 1344 . + . ID=NZ_PJUQ01000055.1:1..1344;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000055.1 RefSeq gene 1 367 . - . ID=gene-CYJ02_RS12945;Name=CYJ02_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12945;partial=true;start_range=.,1 NZ_PJUQ01000055.1 GeneMarkS-2+ CDS 1 367 . - 0 ID=cds-WP_206747227.1;Parent=gene-CYJ02_RS12945;Dbxref=GenBank:WP_206747227.1;Name=WP_206747227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12945;partial=true;product=hypothetical protein;protein_id=WP_206747227.1;start_range=.,1;transl_table=11 NZ_PJUQ01000055.1 RefSeq gene 453 1344 . - . ID=gene-CYJ02_RS12950;Name=CYJ02_RS12950;end_range=1344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12950;partial=true NZ_PJUQ01000055.1 GeneMarkS-2+ CDS 453 1344 . - 1 ID=cds-WP_274539899.1;Parent=gene-CYJ02_RS12950;Dbxref=GenBank:WP_274539899.1;Name=WP_274539899.1;end_range=1344,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12950;partial=true;product=hypothetical protein;protein_id=WP_274539899.1;transl_table=11 ##sequence-region NZ_PJUQ01000056.1 1 3067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000056.1 RefSeq region 1 3067 . + . ID=NZ_PJUQ01000056.1:1..3067;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000056.1 RefSeq pseudogene 119 271 . + . ID=gene-CYJ02_RS12105;Name=CYJ02_RS12105;end_range=271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12105;old_locus_tag=CYJ02_12105;partial=true;pseudo=true NZ_PJUQ01000056.1 Protein Homology CDS 119 271 . + 0 ID=cds-CYJ02_RS12105;Parent=gene-CYJ02_RS12105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ02_RS12105;partial=true;product=2-dehydropantoate 2-reductase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_PJUQ01000056.1 RefSeq gene 685 1887 . - . ID=gene-CYJ02_RS12115;Name=CYJ02_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12115;old_locus_tag=CYJ02_12115 NZ_PJUQ01000056.1 Protein Homology CDS 685 1887 . - 0 ID=cds-WP_063284857.1;Parent=gene-CYJ02_RS12115;Dbxref=GenBank:WP_063284857.1;Name=WP_063284857.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=CYJ02_RS12115;product=MFS transporter;protein_id=WP_063284857.1;transl_table=11 NZ_PJUQ01000056.1 RefSeq gene 1884 2366 . - . ID=gene-CYJ02_RS12120;Name=CYJ02_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12120;old_locus_tag=CYJ02_12120 NZ_PJUQ01000056.1 Protein Homology CDS 1884 2366 . - 0 ID=cds-WP_335340966.1;Parent=gene-CYJ02_RS12120;Dbxref=GenBank:WP_335340966.1;Name=WP_335340966.1;Ontology_term=GO:0070981,GO:0004066,GO:0005524;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA,ATP binding|0005524||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF012936.7;locus_tag=CYJ02_RS12120;product=asparagine synthase C-terminal domain-containing protein;protein_id=WP_335340966.1;transl_table=11 ##sequence-region NZ_PJUQ01000057.1 1 2730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000057.1 RefSeq region 1 2730 . + . ID=NZ_PJUQ01000057.1:1..2730;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000057.1 RefSeq gene 86 526 . - . ID=gene-CYJ02_RS13150;Name=CYJ02_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13150 NZ_PJUQ01000057.1 Protein Homology CDS 86 526 . - 0 ID=cds-WP_014614466.1;Parent=gene-CYJ02_RS13150;Dbxref=GenBank:WP_014614466.1;Name=WP_014614466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614466.1;locus_tag=CYJ02_RS13150;product=DUF6978 family protein;protein_id=WP_014614466.1;transl_table=11 NZ_PJUQ01000057.1 RefSeq gene 1084 1506 . + . ID=gene-CYJ02_RS12130;Name=fosB;gbkey=Gene;gene=fosB;gene_biotype=protein_coding;locus_tag=CYJ02_RS12130;old_locus_tag=CYJ02_12130 NZ_PJUQ01000057.1 Protein Homology CDS 1084 1506 . + 0 ID=cds-WP_014614469.1;Parent=gene-CYJ02_RS12130;Dbxref=GenBank:WP_014614469.1;Name=WP_014614469.1;gbkey=CDS;gene=fosB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166891.1;locus_tag=CYJ02_RS12130;product=FosB/FosD family fosfomycin resistance bacillithiol transferase;protein_id=WP_014614469.1;transl_table=11 NZ_PJUQ01000057.1 RefSeq gene 1598 1903 . + . ID=gene-CYJ02_RS12135;Name=CYJ02_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12135;old_locus_tag=CYJ02_12135 NZ_PJUQ01000057.1 Protein Homology CDS 1598 1903 . + 0 ID=cds-WP_014614468.1;Parent=gene-CYJ02_RS12135;Dbxref=GenBank:WP_014614468.1;Name=WP_014614468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166890.1;locus_tag=CYJ02_RS12135;product=nuclear transport factor 2 family protein;protein_id=WP_014614468.1;transl_table=11 NZ_PJUQ01000057.1 RefSeq gene 2008 2730 . - . ID=gene-CYJ02_RS12140;Name=CYJ02_RS12140;end_range=2730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12140;old_locus_tag=CYJ02_12140;partial=true NZ_PJUQ01000057.1 Protein Homology CDS 2008 2730 . - 0 ID=cds-WP_101431719.1;Parent=gene-CYJ02_RS12140;Dbxref=GenBank:WP_101431719.1;Name=WP_101431719.1;end_range=2730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614467.1;locus_tag=CYJ02_RS12140;partial=true;product=DUF1828 domain-containing protein;protein_id=WP_101431719.1;transl_table=11 ##sequence-region NZ_PJUQ01000058.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000058.1 RefSeq region 1 539 . + . ID=NZ_PJUQ01000058.1:1..539;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000058.1 RefSeq pseudogene 1 539 . - . ID=gene-CYJ02_RS12145;Name=CYJ02_RS12145;end_range=539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12145;old_locus_tag=CYJ02_12145;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000058.1 Protein Homology CDS 1 539 . - 1 ID=cds-CYJ02_RS12145;Parent=gene-CYJ02_RS12145;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12145;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000059.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000059.1 RefSeq region 1 660 . + . ID=NZ_PJUQ01000059.1:1..660;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000059.1 RefSeq gene 1 611 . - . ID=gene-CYJ02_RS12150;Name=CYJ02_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12150;old_locus_tag=CYJ02_12150;partial=true;start_range=.,1 NZ_PJUQ01000059.1 Protein Homology CDS 1 611 . - 0 ID=cds-WP_241901350.1;Parent=gene-CYJ02_RS12150;Dbxref=GenBank:WP_241901350.1;Name=WP_241901350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12150;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241901350.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000006.1 1 111990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000006.1 RefSeq region 1 111990 . + . ID=NZ_PJUQ01000006.1:1..111990;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000006.1 RefSeq gene 309 1667 . - . ID=gene-CYJ02_RS04075;Name=CYJ02_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04075;old_locus_tag=CYJ02_04075 NZ_PJUQ01000006.1 Protein Homology CDS 309 1667 . - 0 ID=cds-WP_037543467.1;Parent=gene-CYJ02_RS04075;Dbxref=GenBank:WP_037543467.1;Name=WP_037543467.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488327.1;locus_tag=CYJ02_RS04075;product=TrkH family potassium uptake protein;protein_id=WP_037543467.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 1684 3336 . - . ID=gene-CYJ02_RS04080;Name=CYJ02_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04080;old_locus_tag=CYJ02_04080 NZ_PJUQ01000006.1 Protein Homology CDS 1684 3336 . - 0 ID=cds-WP_101431407.1;Parent=gene-CYJ02_RS04080;Dbxref=GenBank:WP_101431407.1;Name=WP_101431407.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=CYJ02_RS04080;product=S1C family serine protease;protein_id=WP_101431407.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 3647 4456 . - . ID=gene-CYJ02_RS04085;Name=CYJ02_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04085;old_locus_tag=CYJ02_04085 NZ_PJUQ01000006.1 Protein Homology CDS 3647 4456 . - 0 ID=cds-WP_172425808.1;Parent=gene-CYJ02_RS04085;Dbxref=GenBank:WP_172425808.1;Name=WP_172425808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614342.1;locus_tag=CYJ02_RS04085;product=TerC family protein;protein_id=WP_172425808.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 4919 6481 . - . ID=gene-CYJ02_RS04090;Name=CYJ02_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04090;old_locus_tag=CYJ02_04090 NZ_PJUQ01000006.1 Protein Homology CDS 4919 6481 . - 0 ID=cds-WP_101431408.1;Parent=gene-CYJ02_RS04090;Dbxref=GenBank:WP_101431408.1;Name=WP_101431408.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=CYJ02_RS04090;product=peptide chain release factor 3;protein_id=WP_101431408.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 6502 6741 . - . ID=gene-CYJ02_RS04095;Name=CYJ02_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04095;old_locus_tag=CYJ02_04095 NZ_PJUQ01000006.1 Protein Homology CDS 6502 6741 . - 0 ID=cds-WP_014614344.1;Parent=gene-CYJ02_RS04095;Dbxref=GenBank:WP_014614344.1;Name=WP_014614344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=CYJ02_RS04095;product=YueH family protein;protein_id=WP_014614344.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 6731 8215 . - . ID=gene-CYJ02_RS04100;Name=CYJ02_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04100;old_locus_tag=CYJ02_04100 NZ_PJUQ01000006.1 Protein Homology CDS 6731 8215 . - 0 ID=cds-WP_101431409.1;Parent=gene-CYJ02_RS04100;Dbxref=GenBank:WP_101431409.1;Name=WP_101431409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=CYJ02_RS04100;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_101431409.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 8886 10061 . + . ID=gene-CYJ02_RS04110;Name=CYJ02_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04110;old_locus_tag=CYJ02_04110 NZ_PJUQ01000006.1 Protein Homology CDS 8886 10061 . + 0 ID=cds-WP_101431410.1;Parent=gene-CYJ02_RS04110;Dbxref=GenBank:WP_101431410.1;Name=WP_101431410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167265.1;locus_tag=CYJ02_RS04110;product=diglucosyl diacylglycerol synthase;protein_id=WP_101431410.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 10039 11223 . + . ID=gene-CYJ02_RS04115;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04115;old_locus_tag=CYJ02_04115 NZ_PJUQ01000006.1 Protein Homology CDS 10039 11223 . + 0 ID=cds-WP_180909627.1;Parent=gene-CYJ02_RS04115;Dbxref=GenBank:WP_180909627.1;Name=WP_180909627.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614347.1;locus_tag=CYJ02_RS04115;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_180909627.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 11629 13116 . + . ID=gene-CYJ02_RS04120;Name=CYJ02_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04120;old_locus_tag=CYJ02_04120 NZ_PJUQ01000006.1 Protein Homology CDS 11629 13116 . + 0 ID=cds-WP_099992108.1;Parent=gene-CYJ02_RS04120;Dbxref=GenBank:WP_099992108.1;Name=WP_099992108.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165969.1;locus_tag=CYJ02_RS04120;product=arylsulfatase;protein_id=WP_099992108.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 13221 14117 . + . ID=gene-CYJ02_RS04125;Name=CYJ02_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04125;old_locus_tag=CYJ02_04125 NZ_PJUQ01000006.1 Protein Homology CDS 13221 14117 . + 0 ID=cds-WP_015728906.1;Parent=gene-CYJ02_RS04125;Dbxref=GenBank:WP_015728906.1;Name=WP_015728906.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168844.1;locus_tag=CYJ02_RS04125;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_015728906.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 14104 14997 . + . ID=gene-CYJ02_RS04130;Name=CYJ02_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04130;old_locus_tag=CYJ02_04130 NZ_PJUQ01000006.1 Protein Homology CDS 14104 14997 . + 0 ID=cds-WP_101431412.1;Parent=gene-CYJ02_RS04130;Dbxref=GenBank:WP_101431412.1;Name=WP_101431412.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165971.1;locus_tag=CYJ02_RS04130;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_101431412.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 15569 16075 . - . ID=gene-CYJ02_RS04135;Name=CYJ02_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04135;old_locus_tag=CYJ02_04135 NZ_PJUQ01000006.1 Protein Homology CDS 15569 16075 . - 0 ID=cds-WP_063279083.1;Parent=gene-CYJ02_RS04135;Dbxref=GenBank:WP_063279083.1;Name=WP_063279083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728896.1;locus_tag=CYJ02_RS04135;product=2'-5' RNA ligase family protein;protein_id=WP_063279083.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 16129 16863 . - . ID=gene-CYJ02_RS04140;Name=CYJ02_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04140;old_locus_tag=CYJ02_04140 NZ_PJUQ01000006.1 Protein Homology CDS 16129 16863 . - 0 ID=cds-WP_014614352.1;Parent=gene-CYJ02_RS04140;Dbxref=GenBank:WP_014614352.1;Name=WP_014614352.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728895.1;locus_tag=CYJ02_RS04140;product=esterase family protein;protein_id=WP_014614352.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 16966 18537 . - . ID=gene-CYJ02_RS04145;Name=CYJ02_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04145;old_locus_tag=CYJ02_04145 NZ_PJUQ01000006.1 Protein Homology CDS 16966 18537 . - 0 ID=cds-WP_063284623.1;Parent=gene-CYJ02_RS04145;Dbxref=GenBank:WP_063284623.1;Name=WP_063284623.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165974.1;locus_tag=CYJ02_RS04145;product=alanine/glycine:cation symporter family protein;protein_id=WP_063284623.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 18756 19853 . + . ID=gene-CYJ02_RS04150;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=CYJ02_RS04150;old_locus_tag=CYJ02_04150 NZ_PJUQ01000006.1 Protein Homology CDS 18756 19853 . + 0 ID=cds-WP_070407525.1;Parent=gene-CYJ02_RS04150;Dbxref=GenBank:WP_070407525.1;Name=WP_070407525.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=CYJ02_RS04150;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_070407525.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 20145 20915 . - . ID=gene-CYJ02_RS04155;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CYJ02_RS04155;old_locus_tag=CYJ02_04155 NZ_PJUQ01000006.1 Protein Homology CDS 20145 20915 . - 0 ID=cds-WP_037543489.1;Parent=gene-CYJ02_RS04155;Dbxref=GenBank:WP_037543489.1;Name=WP_037543489.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=CYJ02_RS04155;product=enoyl-ACP reductase FabI;protein_id=WP_037543489.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 21062 22897 . - . ID=gene-CYJ02_RS04160;Name=CYJ02_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04160;old_locus_tag=CYJ02_04160 NZ_PJUQ01000006.1 Protein Homology CDS 21062 22897 . - 0 ID=cds-WP_101431413.1;Parent=gene-CYJ02_RS04160;Dbxref=GenBank:WP_101431413.1;Name=WP_101431413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165977.1;locus_tag=CYJ02_RS04160;product=monovalent cation:proton antiporter family protein;protein_id=WP_101431413.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 22908 24251 . - . ID=gene-CYJ02_RS04165;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CYJ02_RS04165;old_locus_tag=CYJ02_04165 NZ_PJUQ01000006.1 Protein Homology CDS 22908 24251 . - 0 ID=cds-WP_233509812.1;Parent=gene-CYJ02_RS04165;Dbxref=GenBank:WP_233509812.1;Name=WP_233509812.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165978.1;locus_tag=CYJ02_RS04165;product=magnesium transporter;protein_id=WP_233509812.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 24322 25176 . - . ID=gene-CYJ02_RS04170;Name=CYJ02_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04170;old_locus_tag=CYJ02_04170 NZ_PJUQ01000006.1 Protein Homology CDS 24322 25176 . - 0 ID=cds-WP_096533220.1;Parent=gene-CYJ02_RS04170;Dbxref=GenBank:WP_096533220.1;Name=WP_096533220.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=CYJ02_RS04170;product=RluA family pseudouridine synthase;protein_id=WP_096533220.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 25173 25982 . - . ID=gene-CYJ02_RS04175;Name=CYJ02_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04175;old_locus_tag=CYJ02_04175 NZ_PJUQ01000006.1 Protein Homology CDS 25173 25982 . - 0 ID=cds-WP_014614362.1;Parent=gene-CYJ02_RS04175;Dbxref=GenBank:WP_014614362.1;Name=WP_014614362.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=CYJ02_RS04175;product=NAD kinase;protein_id=WP_014614362.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 25994 26632 . - . ID=gene-CYJ02_RS04180;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=CYJ02_RS04180;old_locus_tag=CYJ02_04180 NZ_PJUQ01000006.1 Protein Homology CDS 25994 26632 . - 0 ID=cds-WP_014614363.1;Parent=gene-CYJ02_RS04180;Dbxref=GenBank:WP_014614363.1;Name=WP_014614363.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614363.1;locus_tag=CYJ02_RS04180;product=GTP diphosphokinase;protein_id=WP_014614363.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 26649 26996 . - . ID=gene-CYJ02_RS04185;Name=CYJ02_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04185;old_locus_tag=CYJ02_04185 NZ_PJUQ01000006.1 Protein Homology CDS 26649 26996 . - 0 ID=cds-WP_070407527.1;Parent=gene-CYJ02_RS04185;Dbxref=GenBank:WP_070407527.1;Name=WP_070407527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276223.1;locus_tag=CYJ02_RS04185;product=UPF0738 family protein;protein_id=WP_070407527.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 27127 27708 . + . ID=gene-CYJ02_RS04190;Name=CYJ02_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04190;old_locus_tag=CYJ02_04190 NZ_PJUQ01000006.1 Protein Homology CDS 27127 27708 . + 0 ID=cds-WP_015728889.1;Parent=gene-CYJ02_RS04190;Dbxref=GenBank:WP_015728889.1;Name=WP_015728889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728889.1;locus_tag=CYJ02_RS04190;product=CYTH domain-containing protein;protein_id=WP_015728889.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 28056 28427 . + . ID=gene-CYJ02_RS04195;Name=CYJ02_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04195;old_locus_tag=CYJ02_04195 NZ_PJUQ01000006.1 Protein Homology CDS 28056 28427 . + 0 ID=cds-WP_015728888.1;Parent=gene-CYJ02_RS04195;Dbxref=GenBank:WP_015728888.1;Name=WP_015728888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167281.1;locus_tag=CYJ02_RS04195;product=truncated hemoglobin YjbI;protein_id=WP_015728888.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 28444 29232 . + . ID=gene-CYJ02_RS04200;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=CYJ02_RS04200;old_locus_tag=CYJ02_04200 NZ_PJUQ01000006.1 Protein Homology CDS 28444 29232 . + 0 ID=cds-WP_014614367.1;Parent=gene-CYJ02_RS04200;Dbxref=GenBank:WP_014614367.1;Name=WP_014614367.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=CYJ02_RS04200;product=protease adaptor protein YjbH;protein_id=WP_014614367.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 29480 30208 . - . ID=gene-CYJ02_RS04205;Name=CYJ02_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04205;old_locus_tag=CYJ02_04205 NZ_PJUQ01000006.1 Protein Homology CDS 29480 30208 . - 0 ID=cds-WP_014614368.1;Parent=gene-CYJ02_RS04205;Dbxref=GenBank:WP_014614368.1;Name=WP_014614368.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728887.1;locus_tag=CYJ02_RS04205;product=M48 family metallopeptidase;protein_id=WP_014614368.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 30905 32713 . - . ID=gene-CYJ02_RS04210;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ02_RS04210;old_locus_tag=CYJ02_04210 NZ_PJUQ01000006.1 Protein Homology CDS 30905 32713 . - 0 ID=cds-WP_101431414.1;Parent=gene-CYJ02_RS04210;Dbxref=GenBank:WP_101431414.1;Name=WP_101431414.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=CYJ02_RS04210;product=oligoendopeptidase F;protein_id=WP_101431414.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 32787 33545 . - . ID=gene-CYJ02_RS04215;Name=CYJ02_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04215;old_locus_tag=CYJ02_04215 NZ_PJUQ01000006.1 Protein Homology CDS 32787 33545 . - 0 ID=cds-WP_470417749.1;Parent=gene-CYJ02_RS04215;Dbxref=GenBank:WP_470417749.1;Name=WP_470417749.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017832.8;locus_tag=CYJ02_RS04215;product=competence protein CoiA family protein;protein_id=WP_470417749.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 33584 33751 . - . ID=gene-CYJ02_RS12695;Name=CYJ02_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12695 NZ_PJUQ01000006.1 Protein Homology CDS 33584 33751 . - 0 ID=cds-WP_241901307.1;Parent=gene-CYJ02_RS12695;Dbxref=GenBank:WP_241901307.1;Name=WP_241901307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051658.2;locus_tag=CYJ02_RS12695;product=competence protein CoiA family protein;protein_id=WP_241901307.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 34025 34684 . - . ID=gene-CYJ02_RS04220;Name=spsR;gbkey=Gene;gene=spsR;gene_biotype=protein_coding;locus_tag=CYJ02_RS04220;old_locus_tag=CYJ02_04220 NZ_PJUQ01000006.1 Protein Homology CDS 34025 34684 . - 0 ID=cds-WP_101431415.1;Parent=gene-CYJ02_RS04220;Dbxref=GenBank:WP_101431415.1;Name=WP_101431415.1;gbkey=CDS;gene=spsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614371.1;locus_tag=CYJ02_RS04220;product=LPXTG-anchored surface protein SpsR;protein_id=WP_101431415.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 34703 35248 . - . ID=gene-CYJ02_RS12700;Name=CYJ02_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12700 NZ_PJUQ01000006.1 GeneMarkS-2+ CDS 34703 35248 . - 0 ID=cds-WP_015728883.1;Parent=gene-CYJ02_RS12700;Dbxref=GenBank:WP_015728883.1;Name=WP_015728883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12700;product=hypothetical protein;protein_id=WP_015728883.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 35270 36064 . - . ID=gene-CYJ02_RS12705;Name=CYJ02_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12705 NZ_PJUQ01000006.1 Protein Homology CDS 35270 36064 . - 0 ID=cds-WP_241901310.1;Parent=gene-CYJ02_RS12705;Dbxref=GenBank:WP_241901310.1;Name=WP_241901310.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF024758.7;locus_tag=CYJ02_RS12705;product=trypsin-like serine peptidase;protein_id=WP_241901310.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 36608 37306 . - . ID=gene-CYJ02_RS04230;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04230;old_locus_tag=CYJ02_04230 NZ_PJUQ01000006.1 Protein Homology CDS 36608 37306 . - 0 ID=cds-WP_014614373.1;Parent=gene-CYJ02_RS04230;Dbxref=GenBank:WP_014614373.1;Name=WP_014614373.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165987.1;locus_tag=CYJ02_RS04230;product=adaptor protein MecA;protein_id=WP_014614373.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 37640 38035 . - . ID=gene-CYJ02_RS04235;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04235;old_locus_tag=CYJ02_04235 NZ_PJUQ01000006.1 Protein Homology CDS 37640 38035 . - 0 ID=cds-WP_014614374.1;Parent=gene-CYJ02_RS04235;Dbxref=GenBank:WP_014614374.1;Name=WP_014614374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=CYJ02_RS04235;product=transcriptional regulator SpxA;protein_id=WP_014614374.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 38347 39336 . + . ID=gene-CYJ02_RS04240;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CYJ02_RS04240;old_locus_tag=CYJ02_04240 NZ_PJUQ01000006.1 Protein Homology CDS 38347 39336 . + 0 ID=cds-WP_014614375.1;Parent=gene-CYJ02_RS04240;Dbxref=GenBank:WP_014614375.1;Name=WP_014614375.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=CYJ02_RS04240;product=tryptophan--tRNA ligase;protein_id=WP_014614375.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 39899 42139 . - . ID=gene-CYJ02_RS04245;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CYJ02_RS04245;old_locus_tag=CYJ02_04245 NZ_PJUQ01000006.1 Protein Homology CDS 39899 42139 . - 0 ID=cds-WP_340137153.1;Parent=gene-CYJ02_RS04245;Dbxref=GenBank:WP_340137153.1;Name=WP_340137153.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166028.1;locus_tag=CYJ02_RS04245;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_340137153.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 42136 43977 . - . ID=gene-CYJ02_RS04250;Name=CYJ02_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04250;old_locus_tag=CYJ02_04250 NZ_PJUQ01000006.1 Protein Homology CDS 42136 43977 . - 0 ID=cds-WP_014614936.1;Parent=gene-CYJ02_RS04250;Dbxref=GenBank:WP_014614936.1;Name=WP_014614936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=CYJ02_RS04250;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_014614936.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 43931 45106 . - . ID=gene-CYJ02_RS04255;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CYJ02_RS04255;old_locus_tag=CYJ02_04255 NZ_PJUQ01000006.1 Protein Homology CDS 43931 45106 . - 0 ID=cds-WP_065354660.1;Parent=gene-CYJ02_RS04255;Dbxref=GenBank:WP_065354660.1;Name=WP_065354660.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728512.1;locus_tag=CYJ02_RS04255;product=cystathionine beta-lyase MetC;protein_id=WP_065354660.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 45093 46205 . - . ID=gene-CYJ02_RS04260;Name=CYJ02_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04260;old_locus_tag=CYJ02_04260 NZ_PJUQ01000006.1 Protein Homology CDS 45093 46205 . - 0 ID=cds-WP_015728513.1;Parent=gene-CYJ02_RS04260;Dbxref=GenBank:WP_015728513.1;Name=WP_015728513.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220248.1;locus_tag=CYJ02_RS04260;product=PLP-dependent transferase;protein_id=WP_015728513.1;transl_table=11 NZ_PJUQ01000006.1 cmsearch binding_site 46270 46584 . - . ID=id-NZ_PJUQ01000006.1:46270..46584;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000006.1 RefSeq gene 46644 47594 . + . ID=gene-CYJ02_RS04265;Name=CYJ02_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04265;old_locus_tag=CYJ02_04265 NZ_PJUQ01000006.1 Protein Homology CDS 46644 47594 . + 0 ID=cds-WP_081247748.1;Parent=gene-CYJ02_RS04265;Dbxref=GenBank:WP_081247748.1;Name=WP_081247748.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614933.1;locus_tag=CYJ02_RS04265;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_081247748.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 47660 48550 . + . ID=gene-CYJ02_RS04270;Name=CYJ02_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04270;old_locus_tag=CYJ02_04270 NZ_PJUQ01000006.1 Protein Homology CDS 47660 48550 . + 0 ID=cds-WP_014614932.1;Parent=gene-CYJ02_RS04270;Dbxref=GenBank:WP_014614932.1;Name=WP_014614932.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169154.1;locus_tag=CYJ02_RS04270;product=mechanosensitive ion channel family protein;protein_id=WP_014614932.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 48563 48784 . + . ID=gene-CYJ02_RS04275;Name=CYJ02_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04275;old_locus_tag=CYJ02_04275 NZ_PJUQ01000006.1 Protein Homology CDS 48563 48784 . + 0 ID=cds-WP_014614931.1;Parent=gene-CYJ02_RS04275;Dbxref=GenBank:WP_014614931.1;Name=WP_014614931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614931.1;locus_tag=CYJ02_RS04275;product=DUF951 domain-containing protein;protein_id=WP_014614931.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 48775 49872 . + . ID=gene-CYJ02_RS04280;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CYJ02_RS04280;old_locus_tag=CYJ02_04280 NZ_PJUQ01000006.1 Protein Homology CDS 48775 49872 . + 0 ID=cds-WP_014614930.1;Parent=gene-CYJ02_RS04280;Dbxref=GenBank:WP_014614930.1;Name=WP_014614930.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CYJ02_RS04280;product=redox-regulated ATPase YchF;protein_id=WP_014614930.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 50632 51054 . - . ID=gene-CYJ02_RS04285;Name=CYJ02_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04285;old_locus_tag=CYJ02_04285 NZ_PJUQ01000006.1 Protein Homology CDS 50632 51054 . - 0 ID=cds-WP_065354658.1;Parent=gene-CYJ02_RS04285;Dbxref=GenBank:WP_065354658.1;Name=WP_065354658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614928.1;locus_tag=CYJ02_RS04285;product=hypothetical protein;protein_id=WP_065354658.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 51056 51337 . - . ID=gene-CYJ02_RS04290;Name=CYJ02_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04290;old_locus_tag=CYJ02_04290 NZ_PJUQ01000006.1 GeneMarkS-2+ CDS 51056 51337 . - 0 ID=cds-WP_101431416.1;Parent=gene-CYJ02_RS04290;Dbxref=GenBank:WP_101431416.1;Name=WP_101431416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS04290;product=hypothetical protein;protein_id=WP_101431416.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 52474 53409 . + . ID=gene-CYJ02_RS04295;Name=CYJ02_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04295;old_locus_tag=CYJ02_04295 NZ_PJUQ01000006.1 Protein Homology CDS 52474 53409 . + 0 ID=cds-WP_014614924.1;Parent=gene-CYJ02_RS04295;Dbxref=GenBank:WP_014614924.1;Name=WP_014614924.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614924.1;locus_tag=CYJ02_RS04295;product=ABC transporter ATP-binding protein;protein_id=WP_014614924.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 53402 54211 . + . ID=gene-CYJ02_RS04300;Name=CYJ02_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04300;old_locus_tag=CYJ02_04300 NZ_PJUQ01000006.1 Protein Homology CDS 53402 54211 . + 0 ID=cds-WP_096533324.1;Parent=gene-CYJ02_RS04300;Dbxref=GenBank:WP_096533324.1;Name=WP_096533324.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220246.1;locus_tag=CYJ02_RS04300;product=ABC transporter permease subunit;protein_id=WP_096533324.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 54265 55791 . - . ID=gene-CYJ02_RS04305;Name=sbi;gbkey=Gene;gene=sbi;gene_biotype=protein_coding;gene_synonym=spsK;locus_tag=CYJ02_RS04305;old_locus_tag=CYJ02_04305 NZ_PJUQ01000006.1 Protein Homology CDS 54265 55791 . - 0 ID=cds-WP_096533325.1;Parent=gene-CYJ02_RS04305;Dbxref=GenBank:WP_096533325.1;Name=WP_096533325.1;gbkey=CDS;gene=sbi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728518.1;locus_tag=CYJ02_RS04305;product=Ig-binding surface protein Sbi/SpsK;protein_id=WP_096533325.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 56128 56424 . + . ID=gene-CYJ02_RS04310;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CYJ02_RS04310;old_locus_tag=CYJ02_04310 NZ_PJUQ01000006.1 Protein Homology CDS 56128 56424 . + 0 ID=cds-WP_014614921.1;Parent=gene-CYJ02_RS04310;Dbxref=GenBank:WP_014614921.1;Name=WP_014614921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=CYJ02_RS04310;product=30S ribosomal protein S6;protein_id=WP_014614921.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 56447 56953 . + . ID=gene-CYJ02_RS04315;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CYJ02_RS04315;old_locus_tag=CYJ02_04315 NZ_PJUQ01000006.1 Protein Homology CDS 56447 56953 . + 0 ID=cds-WP_014614920.1;Parent=gene-CYJ02_RS04315;Dbxref=GenBank:WP_014614920.1;Name=WP_014614920.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=CYJ02_RS04315;product=single-stranded DNA-binding protein;protein_id=WP_014614920.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 57007 57249 . + . ID=gene-CYJ02_RS04320;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CYJ02_RS04320;old_locus_tag=CYJ02_04320 NZ_PJUQ01000006.1 Protein Homology CDS 57007 57249 . + 0 ID=cds-WP_014614919.1;Parent=gene-CYJ02_RS04320;Dbxref=GenBank:WP_014614919.1;Name=WP_014614919.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=CYJ02_RS04320;product=30S ribosomal protein S18;protein_id=WP_014614919.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 57440 58531 . + . ID=gene-CYJ02_RS04325;Name=CYJ02_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04325;old_locus_tag=CYJ02_04325 NZ_PJUQ01000006.1 Protein Homology CDS 57440 58531 . + 0 ID=cds-WP_101431417.1;Parent=gene-CYJ02_RS04325;Dbxref=GenBank:WP_101431417.1;Name=WP_101431417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361524.1;locus_tag=CYJ02_RS04325;product=Abi family protein;protein_id=WP_101431417.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 58745 60736 . - . ID=gene-CYJ02_RS04330;Name=CYJ02_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04330;old_locus_tag=CYJ02_04330 NZ_PJUQ01000006.1 Protein Homology CDS 58745 60736 . - 0 ID=cds-WP_014614918.1;Parent=gene-CYJ02_RS04330;Dbxref=GenBank:WP_014614918.1;Name=WP_014614918.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=CYJ02_RS04330;product=catalase;protein_id=WP_014614918.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 61129 62124 . + . ID=gene-CYJ02_RS04335;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CYJ02_RS04335;old_locus_tag=CYJ02_04335 NZ_PJUQ01000006.1 Protein Homology CDS 61129 62124 . + 0 ID=cds-WP_101431418.1;Parent=gene-CYJ02_RS04335;Dbxref=GenBank:WP_101431418.1;Name=WP_101431418.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728522.1;locus_tag=CYJ02_RS04335;product=adenosine deaminase;protein_id=WP_101431418.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 62285 63124 . - . ID=gene-CYJ02_RS04340;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=CYJ02_RS04340;old_locus_tag=CYJ02_04340 NZ_PJUQ01000006.1 Protein Homology CDS 62285 63124 . - 0 ID=cds-WP_019166962.1;Parent=gene-CYJ02_RS04340;Dbxref=GenBank:WP_019166962.1;Name=WP_019166962.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425688.1;locus_tag=CYJ02_RS04340;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_019166962.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 63140 63799 . - . ID=gene-CYJ02_RS04345;Name=CYJ02_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04345;old_locus_tag=CYJ02_04345 NZ_PJUQ01000006.1 Protein Homology CDS 63140 63799 . - 0 ID=cds-WP_101431419.1;Parent=gene-CYJ02_RS04345;Dbxref=GenBank:WP_101431419.1;Name=WP_101431419.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CYJ02_RS04345;product=methionine ABC transporter permease;protein_id=WP_101431419.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 63793 64818 . - . ID=gene-CYJ02_RS04350;Name=CYJ02_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04350;old_locus_tag=CYJ02_04350 NZ_PJUQ01000006.1 Protein Homology CDS 63793 64818 . - 0 ID=cds-WP_101431420.1;Parent=gene-CYJ02_RS04350;Dbxref=GenBank:WP_101431420.1;Name=WP_101431420.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166961.1;locus_tag=CYJ02_RS04350;product=methionine ABC transporter ATP-binding protein;protein_id=WP_101431420.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 65134 65511 . - . ID=gene-CYJ02_RS04355;Name=CYJ02_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04355;old_locus_tag=CYJ02_04355 NZ_PJUQ01000006.1 Protein Homology CDS 65134 65511 . - 0 ID=cds-WP_101431421.1;Parent=gene-CYJ02_RS04355;Dbxref=GenBank:WP_101431421.1;Name=WP_101431421.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=CYJ02_RS04355;product=iron chaperone;protein_id=WP_101431421.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 65717 66706 . + . ID=gene-CYJ02_RS04360;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04360;old_locus_tag=CYJ02_04360 NZ_PJUQ01000006.1 Protein Homology CDS 65717 66706 . + 0 ID=cds-WP_014614912.1;Parent=gene-CYJ02_RS04360;Dbxref=GenBank:WP_014614912.1;Name=WP_014614912.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=CYJ02_RS04360;product=biotin synthase BioB;protein_id=WP_014614912.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 66824 67765 . + . ID=gene-CYJ02_RS04365;Name=CYJ02_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04365;old_locus_tag=CYJ02_04365 NZ_PJUQ01000006.1 Protein Homology CDS 66824 67765 . + 0 ID=cds-WP_101431422.1;Parent=gene-CYJ02_RS04365;Dbxref=GenBank:WP_101431422.1;Name=WP_101431422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=CYJ02_RS04365;product=DUF1002 domain-containing protein;protein_id=WP_101431422.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 67966 69489 . - . ID=gene-CYJ02_RS04370;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CYJ02_RS04370;old_locus_tag=CYJ02_04370 NZ_PJUQ01000006.1 Protein Homology CDS 67966 69489 . - 0 ID=cds-WP_101431423.1;Parent=gene-CYJ02_RS04370;Dbxref=GenBank:WP_101431423.1;Name=WP_101431423.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451490.1;locus_tag=CYJ02_RS04370;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_101431423.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 69504 70073 . - . ID=gene-CYJ02_RS04375;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CYJ02_RS04375;old_locus_tag=CYJ02_04375 NZ_PJUQ01000006.1 Protein Homology CDS 69504 70073 . - 0 ID=cds-WP_014614909.1;Parent=gene-CYJ02_RS04375;Dbxref=GenBank:WP_014614909.1;Name=WP_014614909.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CYJ02_RS04375;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_014614909.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 70626 71381 . + . ID=gene-CYJ02_RS04380;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04380;old_locus_tag=CYJ02_04380 NZ_PJUQ01000006.1 Protein Homology CDS 70626 71381 . + 0 ID=cds-WP_014614908.1;Parent=gene-CYJ02_RS04380;Dbxref=GenBank:WP_014614908.1;Name=WP_014614908.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276836.1;locus_tag=CYJ02_RS04380;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_014614908.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 72131 72421 . + . ID=gene-CYJ02_RS04385;Name=CYJ02_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04385;old_locus_tag=CYJ02_04385 NZ_PJUQ01000006.1 Protein Homology CDS 72131 72421 . + 0 ID=cds-WP_037541931.1;Parent=gene-CYJ02_RS04385;Dbxref=GenBank:WP_037541931.1;Name=WP_037541931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000726503.1;locus_tag=CYJ02_RS04385;product=lactococcin 972 family bacteriocin;protein_id=WP_037541931.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 72447 74414 . + . ID=gene-CYJ02_RS04390;Name=CYJ02_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04390;old_locus_tag=CYJ02_04390 NZ_PJUQ01000006.1 Protein Homology CDS 72447 74414 . + 0 ID=cds-WP_037541930.1;Parent=gene-CYJ02_RS04390;Dbxref=GenBank:WP_037541930.1;Name=WP_037541930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614907.1;locus_tag=CYJ02_RS04390;product=DUF1430 domain-containing protein;protein_id=WP_037541930.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 74418 74747 . + . ID=gene-CYJ02_RS04395;Name=CYJ02_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04395;old_locus_tag=CYJ02_04395 NZ_PJUQ01000006.1 Protein Homology CDS 74418 74747 . + 0 ID=cds-WP_037541929.1;Parent=gene-CYJ02_RS04395;Dbxref=GenBank:WP_037541929.1;Name=WP_037541929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463765.1;locus_tag=CYJ02_RS04395;product=YxeA family protein;protein_id=WP_037541929.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 74744 75400 . + . ID=gene-CYJ02_RS04400;Name=CYJ02_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04400;old_locus_tag=CYJ02_04400 NZ_PJUQ01000006.1 Protein Homology CDS 74744 75400 . + 0 ID=cds-WP_037541928.1;Parent=gene-CYJ02_RS04400;Dbxref=GenBank:WP_037541928.1;Name=WP_037541928.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571171.1;locus_tag=CYJ02_RS04400;product=ATP-binding cassette domain-containing protein;protein_id=WP_037541928.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 75833 77224 . - . ID=gene-CYJ02_RS04405;Name=CYJ02_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04405;old_locus_tag=CYJ02_04405 NZ_PJUQ01000006.1 Protein Homology CDS 75833 77224 . - 0 ID=cds-WP_015728531.1;Parent=gene-CYJ02_RS04405;Dbxref=GenBank:WP_015728531.1;Name=WP_015728531.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=CYJ02_RS04405;product=L-cystine transporter;protein_id=WP_015728531.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 77299 78405 . - . ID=gene-CYJ02_RS04410;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CYJ02_RS04410;old_locus_tag=CYJ02_04410 NZ_PJUQ01000006.1 Protein Homology CDS 77299 78405 . - 0 ID=cds-WP_101431424.1;Parent=gene-CYJ02_RS04410;Dbxref=GenBank:WP_101431424.1;Name=WP_101431424.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=CYJ02_RS04410;product=glycine oxidase ThiO;protein_id=WP_101431424.1;transl_table=11 NZ_PJUQ01000006.1 cmsearch riboswitch 78496 78598 . - . ID=id-NZ_PJUQ01000006.1:78496..78598;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000006.1 RefSeq gene 78679 79278 . - . ID=gene-CYJ02_RS04415;Name=CYJ02_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04415;old_locus_tag=CYJ02_04415 NZ_PJUQ01000006.1 Protein Homology CDS 78679 79278 . - 0 ID=cds-WP_014614902.1;Parent=gene-CYJ02_RS04415;Dbxref=GenBank:WP_014614902.1;Name=WP_014614902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=CYJ02_RS04415;product=hypothetical protein;protein_id=WP_014614902.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 79392 80066 . - . ID=gene-CYJ02_RS04420;Name=CYJ02_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04420;old_locus_tag=CYJ02_04420 NZ_PJUQ01000006.1 Protein Homology CDS 79392 80066 . - 0 ID=cds-WP_015728533.1;Parent=gene-CYJ02_RS04420;Dbxref=GenBank:WP_015728533.1;Name=WP_015728533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=CYJ02_RS04420;product=hypothetical protein;protein_id=WP_015728533.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 80262 80684 . - . ID=gene-CYJ02_RS04425;Name=CYJ02_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04425;old_locus_tag=CYJ02_04425 NZ_PJUQ01000006.1 Protein Homology CDS 80262 80684 . - 0 ID=cds-WP_014614900.1;Parent=gene-CYJ02_RS04425;Dbxref=GenBank:WP_014614900.1;Name=WP_014614900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=CYJ02_RS04425;product=general stress protein;protein_id=WP_014614900.1;transl_table=11 NZ_PJUQ01000006.1 cmsearch riboswitch 80859 80961 . + . ID=id-NZ_PJUQ01000006.1:80859..80961;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000006.1 RefSeq gene 81145 81729 . + . ID=gene-CYJ02_RS04430;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CYJ02_RS04430;old_locus_tag=CYJ02_04430 NZ_PJUQ01000006.1 Protein Homology CDS 81145 81729 . + 0 ID=cds-WP_096533335.1;Parent=gene-CYJ02_RS04430;Dbxref=GenBank:WP_096533335.1;Name=WP_096533335.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166944.1;locus_tag=CYJ02_RS04430;product=xanthine phosphoribosyltransferase;protein_id=WP_096533335.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 81726 82994 . + . ID=gene-CYJ02_RS04435;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=CYJ02_RS04435;old_locus_tag=CYJ02_04435 NZ_PJUQ01000006.1 Protein Homology CDS 81726 82994 . + 0 ID=cds-WP_101431425.1;Parent=gene-CYJ02_RS04435;Dbxref=GenBank:WP_101431425.1;Name=WP_101431425.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CYJ02_RS04435;product=xanthine permease PbuX;protein_id=WP_101431425.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 83032 84498 . + . ID=gene-CYJ02_RS04440;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04440;old_locus_tag=CYJ02_04440 NZ_PJUQ01000006.1 Protein Homology CDS 83032 84498 . + 0 ID=cds-WP_014614897.1;Parent=gene-CYJ02_RS04440;Dbxref=GenBank:WP_014614897.1;Name=WP_014614897.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CYJ02_RS04440;product=IMP dehydrogenase;protein_id=WP_014614897.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 84521 86062 . + . ID=gene-CYJ02_RS04445;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04445;old_locus_tag=CYJ02_04445 NZ_PJUQ01000006.1 Protein Homology CDS 84521 86062 . + 0 ID=cds-WP_014614896.1;Parent=gene-CYJ02_RS04445;Dbxref=GenBank:WP_014614896.1;Name=WP_014614896.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ02_RS04445;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_014614896.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 86130 87323 . - . ID=gene-CYJ02_RS04450;Name=CYJ02_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04450;old_locus_tag=CYJ02_04450 NZ_PJUQ01000006.1 Protein Homology CDS 86130 87323 . - 0 ID=cds-WP_000237797.1;Parent=gene-CYJ02_RS04450;Dbxref=GenBank:WP_000237797.1;Name=WP_000237797.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388733.1;locus_tag=CYJ02_RS04450;product=site-specific integrase;protein_id=WP_000237797.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 87350 87550 . - . ID=gene-CYJ02_RS04455;Name=CYJ02_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04455;old_locus_tag=CYJ02_04455 NZ_PJUQ01000006.1 Protein Homology CDS 87350 87550 . - 0 ID=cds-WP_000633907.1;Parent=gene-CYJ02_RS04455;Dbxref=GenBank:WP_000633907.1;Name=WP_000633907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633907.1;locus_tag=CYJ02_RS04455;product=DUF3173 family protein;protein_id=WP_000633907.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 88048 88278 . - . ID=gene-CYJ02_RS04465;Name=CYJ02_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04465;old_locus_tag=CYJ02_04465 NZ_PJUQ01000006.1 Protein Homology CDS 88048 88278 . - 0 ID=cds-WP_000845143.1;Parent=gene-CYJ02_RS04465;Dbxref=GenBank:WP_000845143.1;Name=WP_000845143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317542.1;locus_tag=CYJ02_RS04465;product=helix-turn-helix domain-containing protein;protein_id=WP_000845143.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 88275 88697 . - . ID=gene-CYJ02_RS04470;Name=CYJ02_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04470;old_locus_tag=CYJ02_04470 NZ_PJUQ01000006.1 Protein Homology CDS 88275 88697 . - 0 ID=cds-WP_000804879.1;Parent=gene-CYJ02_RS04470;Dbxref=GenBank:WP_000804879.1;Name=WP_000804879.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804881.1;locus_tag=CYJ02_RS04470;product=RNA polymerase sigma factor;protein_id=WP_000804879.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 89228 89581 . + . ID=gene-CYJ02_RS04480;Name=CYJ02_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04480;old_locus_tag=CYJ02_04480 NZ_PJUQ01000006.1 Protein Homology CDS 89228 89581 . + 0 ID=cds-WP_001227350.1;Parent=gene-CYJ02_RS04480;Dbxref=GenBank:WP_001227350.1;Name=WP_001227350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227349.1;locus_tag=CYJ02_RS04480;product=helix-turn-helix domain-containing protein;protein_id=WP_001227350.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 89639 89806 . - . ID=gene-CYJ02_RS04485;Name=CYJ02_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04485;old_locus_tag=CYJ02_04485 NZ_PJUQ01000006.1 Protein Homology CDS 89639 89806 . - 0 ID=cds-WP_001803271.1;Parent=gene-CYJ02_RS04485;Dbxref=GenBank:WP_001803271.1;Name=WP_001803271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.7;locus_tag=CYJ02_RS04485;product=cysteine-rich KTR domain-containing protein;protein_id=WP_001803271.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 89925 91844 . - . ID=gene-CYJ02_RS04490;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=CYJ02_RS04490;old_locus_tag=CYJ02_04490 NZ_PJUQ01000006.1 Protein Homology CDS 89925 91844 . - 0 ID=cds-WP_000691737.1;Parent=gene-CYJ02_RS04490;Dbxref=GenBank:WP_000691737.1;Name=WP_000691737.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=CYJ02_RS04490;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=WP_000691737.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 91860 91946 . - . ID=gene-CYJ02_RS04495;Name=CYJ02_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04495;old_locus_tag=CYJ02_04495 NZ_PJUQ01000006.1 Protein Homology CDS 91860 91946 . - 0 ID=cds-WP_011058339.1;Parent=gene-CYJ02_RS04495;Dbxref=GenBank:WP_011058339.1;Name=WP_011058339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011335.0;locus_tag=CYJ02_RS04495;product=tetracycline resistance determinant leader peptide;protein_id=WP_011058339.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 92221 93150 . - . ID=gene-CYJ02_RS04505;Name=CYJ02_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04505;old_locus_tag=CYJ02_04505 NZ_PJUQ01000006.1 Protein Homology CDS 92221 93150 . - 0 ID=cds-WP_000584387.1;Parent=gene-CYJ02_RS04505;Dbxref=GenBank:WP_000584387.1;Name=WP_000584387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650613.1;locus_tag=CYJ02_RS04505;product=conjugal transfer protein;protein_id=WP_000584387.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 93167 94189 . - . ID=gene-CYJ02_RS04510;Name=CYJ02_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04510;old_locus_tag=CYJ02_04510 NZ_PJUQ01000006.1 Protein Homology CDS 93167 94189 . - 0 ID=cds-WP_000768373.1;Parent=gene-CYJ02_RS04510;Dbxref=GenBank:WP_000768373.1;Name=WP_000768373.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768374.1;locus_tag=CYJ02_RS04510;product=bifunctional lytic transglycosylase/C40 family peptidase;protein_id=WP_000768373.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 94186 96213 . - . ID=gene-CYJ02_RS04515;Name=CYJ02_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04515;old_locus_tag=CYJ02_04515 NZ_PJUQ01000006.1 Protein Homology CDS 94186 96213 . - 0 ID=cds-WP_000192393.1;Parent=gene-CYJ02_RS04515;Dbxref=GenBank:WP_000192393.1;Name=WP_000192393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192391.1;locus_tag=CYJ02_RS04515;product=CD3337/EF1877 family mobilome membrane protein;protein_id=WP_000192393.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 96210 98663 . - . ID=gene-CYJ02_RS04520;Name=tcpF;gbkey=Gene;gene=tcpF;gene_biotype=protein_coding;locus_tag=CYJ02_RS04520;old_locus_tag=CYJ02_04520 NZ_PJUQ01000006.1 Protein Homology CDS 96210 98663 . - 0 ID=cds-WP_101431426.1;Parent=gene-CYJ02_RS04520;Dbxref=GenBank:WP_101431426.1;Name=WP_101431426.1;gbkey=CDS;gene=tcpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331166.1;locus_tag=CYJ02_RS04520;product=conjugal transfer ATPase TcpF;protein_id=WP_101431426.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 98647 99042 . - . ID=gene-CYJ02_RS04525;Name=CYJ02_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04525;old_locus_tag=CYJ02_04525 NZ_PJUQ01000006.1 Protein Homology CDS 98647 99042 . - 0 ID=cds-WP_000723887.1;Parent=gene-CYJ02_RS04525;Dbxref=GenBank:WP_000723887.1;Name=WP_000723887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018705628.1;locus_tag=CYJ02_RS04525;product=conjugal transfer protein;protein_id=WP_000723887.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 99114 99752 . - . ID=gene-CYJ02_RS04530;Name=CYJ02_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04530;old_locus_tag=CYJ02_04530 NZ_PJUQ01000006.1 Protein Homology CDS 99114 99752 . - 0 ID=cds-WP_000248477.1;Parent=gene-CYJ02_RS04530;Dbxref=GenBank:WP_000248477.1;Name=WP_000248477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001023156.1;locus_tag=CYJ02_RS04530;product=DUF6037 family protein;protein_id=WP_000248477.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 99808 100308 . - . ID=gene-CYJ02_RS04535;Name=CYJ02_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04535;old_locus_tag=CYJ02_04535 NZ_PJUQ01000006.1 Protein Homology CDS 99808 100308 . - 0 ID=cds-WP_000425404.1;Parent=gene-CYJ02_RS04535;Dbxref=GenBank:WP_000425404.1;Name=WP_000425404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425404.1;locus_tag=CYJ02_RS04535;product=antirestriction protein ArdA;protein_id=WP_000425404.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 100369 101130 . - . ID=gene-CYJ02_RS04540;Name=CYJ02_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04540;old_locus_tag=CYJ02_04540 NZ_PJUQ01000006.1 Protein Homology CDS 100369 101130 . - 0 ID=cds-WP_001565981.1;Parent=gene-CYJ02_RS04540;Dbxref=GenBank:WP_001565981.1;Name=WP_001565981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025713.7;locus_tag=CYJ02_RS04540;product=abortive infection family protein;protein_id=WP_001565981.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 101190 101411 . - . ID=gene-CYJ02_RS04545;Name=CYJ02_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04545;old_locus_tag=CYJ02_04545 NZ_PJUQ01000006.1 Protein Homology CDS 101190 101411 . - 0 ID=cds-WP_001009054.1;Parent=gene-CYJ02_RS04545;Dbxref=GenBank:WP_001009054.1;Name=WP_001009054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002405428.1;locus_tag=CYJ02_RS04545;product=hypothetical protein;protein_id=WP_001009054.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 101408 101698 . - . ID=gene-CYJ02_RS04550;Name=CYJ02_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04550;old_locus_tag=CYJ02_04550 NZ_PJUQ01000006.1 GeneMarkS-2+ CDS 101408 101698 . - 0 ID=cds-WP_000055376.1;Parent=gene-CYJ02_RS04550;Dbxref=GenBank:WP_000055376.1;Name=WP_000055376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS04550;product=hypothetical protein;protein_id=WP_000055376.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 101695 102879 . - . ID=gene-CYJ02_RS04555;Name=mobT;gbkey=Gene;gene=mobT;gene_biotype=protein_coding;locus_tag=CYJ02_RS04555;old_locus_tag=CYJ02_04555 NZ_PJUQ01000006.1 Protein Homology CDS 101695 102879 . - 0 ID=cds-WP_000426689.1;Parent=gene-CYJ02_RS04555;Dbxref=GenBank:WP_000426689.1;Name=WP_000426689.1;Ontology_term=GO:0006270,GO:0003677;gbkey=CDS;gene=mobT;go_function=DNA binding|0003677||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426690.1;locus_tag=CYJ02_RS04555;product=MobT family relaxase;protein_id=WP_000426689.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 103061 104464 . - . ID=gene-CYJ02_RS04560;Name=CYJ02_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04560;old_locus_tag=CYJ02_04560 NZ_PJUQ01000006.1 Protein Homology CDS 103061 104464 . - 0 ID=cds-WP_001130244.1;Parent=gene-CYJ02_RS04560;Dbxref=GenBank:WP_001130244.1;Name=WP_001130244.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130245.1;locus_tag=CYJ02_RS04560;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_001130244.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 104486 105259 . - . ID=gene-CYJ02_RS04565;Name=CYJ02_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04565;old_locus_tag=CYJ02_04565 NZ_PJUQ01000006.1 Protein Homology CDS 104486 105259 . - 0 ID=cds-WP_000185761.1;Parent=gene-CYJ02_RS04565;Dbxref=GenBank:WP_000185761.1;Name=WP_000185761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002388713.1;locus_tag=CYJ02_RS04565;product=Mom family adenine methylcarbamoylation protein;protein_id=WP_000185761.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 105269 105646 . - . ID=gene-CYJ02_RS04570;Name=CYJ02_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04570;old_locus_tag=CYJ02_04570 NZ_PJUQ01000006.1 Protein Homology CDS 105269 105646 . - 0 ID=cds-WP_001234191.1;Parent=gene-CYJ02_RS04570;Dbxref=GenBank:WP_001234191.1;Name=WP_001234191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009925013.1;locus_tag=CYJ02_RS04570;product=YdcP family protein;protein_id=WP_001234191.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 105667 105981 . - . ID=gene-CYJ02_RS04575;Name=CYJ02_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04575;old_locus_tag=CYJ02_04575 NZ_PJUQ01000006.1 Protein Homology CDS 105667 105981 . - 0 ID=cds-WP_000421279.1;Parent=gene-CYJ02_RS04575;Dbxref=GenBank:WP_000421279.1;Name=WP_000421279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018705633.1;locus_tag=CYJ02_RS04575;product=YdcP family protein;protein_id=WP_000421279.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 106181 107974 . - . ID=gene-CYJ02_RS04580;Name=CYJ02_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04580;old_locus_tag=CYJ02_04580 NZ_PJUQ01000006.1 Protein Homology CDS 106181 107974 . - 0 ID=cds-WP_000181735.1;Parent=gene-CYJ02_RS04580;Dbxref=GenBank:WP_000181735.1;Name=WP_000181735.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017473219.1;locus_tag=CYJ02_RS04580;product=ATP-dependent helicase;protein_id=WP_000181735.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 107971 110160 . - . ID=gene-CYJ02_RS04585;Name=CYJ02_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04585;old_locus_tag=CYJ02_04585 NZ_PJUQ01000006.1 Protein Homology CDS 107971 110160 . - 0 ID=cds-WP_000470931.1;Parent=gene-CYJ02_RS04585;Dbxref=GenBank:WP_000470931.1;Name=WP_000470931.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470930.1;locus_tag=CYJ02_RS04585;product=ATP-dependent nuclease;protein_id=WP_000470931.1;transl_table=11 NZ_PJUQ01000006.1 RefSeq gene 110294 111484 . - . ID=gene-CYJ02_RS04590;Name=CYJ02_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04590;old_locus_tag=CYJ02_04590 NZ_PJUQ01000006.1 Protein Homology CDS 110294 111484 . - 0 ID=cds-WP_000997694.1;Parent=gene-CYJ02_RS04590;Dbxref=GenBank:WP_000997694.1;Name=WP_000997694.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997693.1;locus_tag=CYJ02_RS04590;product=IS256-like element ISLgar5 family transposase;protein_id=WP_000997694.1;transl_table=11 ##sequence-region NZ_PJUQ01000060.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000060.1 RefSeq region 1 1221 . + . ID=NZ_PJUQ01000060.1:1..1221;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000060.1 RefSeq pseudogene 1 1221 . - . ID=gene-CYJ02_RS12875;Name=CYJ02_RS12875;end_range=1221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12875;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000060.1 Protein Homology CDS 1 1221 . - 0 ID=cds-CYJ02_RS12875;Parent=gene-CYJ02_RS12875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000061.1 1 1650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000061.1 RefSeq region 1 1650 . + . ID=NZ_PJUQ01000061.1:1..1650;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000061.1 RefSeq pseudogene 429 1628 . - . ID=gene-CYJ02_RS12170;Name=CYJ02_RS12170;end_range=1628,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12170;old_locus_tag=CYJ02_12170;partial=true;pseudo=true NZ_PJUQ01000061.1 Protein Homology CDS 429 1628 . - 0 ID=cds-CYJ02_RS12170;Parent=gene-CYJ02_RS12170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;end_range=1628,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498732.1;locus_tag=CYJ02_RS12170;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_PJUQ01000062.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000062.1 RefSeq region 1 322 . + . ID=NZ_PJUQ01000062.1:1..322;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000062.1 RefSeq pseudogene 1 322 . + . ID=gene-CYJ02_RS12175;Name=CYJ02_RS12175;end_range=322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12175;old_locus_tag=CYJ02_12175;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000062.1 Protein Homology CDS 1 322 . + 0 ID=cds-CYJ02_RS12175;Parent=gene-CYJ02_RS12175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12175;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000063.1 1 1820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000063.1 RefSeq region 1 1820 . + . ID=NZ_PJUQ01000063.1:1..1820;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000063.1 RefSeq gene 1 496 . + . ID=gene-CYJ02_RS12180;Name=CYJ02_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12180;old_locus_tag=CYJ02_12180;partial=true;start_range=.,1 NZ_PJUQ01000063.1 Protein Homology CDS 1 496 . + 1 ID=cds-WP_133121720.1;Parent=gene-CYJ02_RS12180;Dbxref=GenBank:WP_133121720.1;Name=WP_133121720.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219767.1;locus_tag=CYJ02_RS12180;partial=true;product=metal ABC transporter ATP-binding protein;protein_id=WP_133121720.1;start_range=.,1;transl_table=11 NZ_PJUQ01000063.1 RefSeq gene 493 1380 . + . ID=gene-CYJ02_RS12185;Name=CYJ02_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12185;old_locus_tag=CYJ02_12185 NZ_PJUQ01000063.1 Protein Homology CDS 493 1380 . + 0 ID=cds-WP_014613802.1;Parent=gene-CYJ02_RS12185;Dbxref=GenBank:WP_014613802.1;Name=WP_014613802.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=CYJ02_RS12185;product=metal ABC transporter permease;protein_id=WP_014613802.1;transl_table=11 NZ_PJUQ01000063.1 RefSeq gene 1343 1756 . + . ID=gene-CYJ02_RS12190;Name=CYJ02_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12190;old_locus_tag=CYJ02_12190 NZ_PJUQ01000063.1 Protein Homology CDS 1343 1756 . + 0 ID=cds-WP_020219768.1;Parent=gene-CYJ02_RS12190;Dbxref=GenBank:WP_020219768.1;Name=WP_020219768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382556.1;locus_tag=CYJ02_RS12190;product=Fur family transcriptional regulator;protein_id=WP_020219768.1;transl_table=11 ##sequence-region NZ_PJUQ01000064.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000064.1 RefSeq region 1 598 . + . ID=NZ_PJUQ01000064.1:1..598;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000064.1 RefSeq gene 1 598 . - . ID=gene-CYJ02_RS12195;Name=CYJ02_RS12195;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12195;old_locus_tag=CYJ02_12195;partial=true;start_range=.,1 NZ_PJUQ01000064.1 Protein Homology CDS 1 598 . - 2 ID=cds-WP_133121721.1;Parent=gene-CYJ02_RS12195;Dbxref=GenBank:WP_133121721.1;Name=WP_133121721.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=598,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1;locus_tag=CYJ02_RS12195;partial=true;product=transposase;protein_id=WP_133121721.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000065.1 1 596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000065.1 RefSeq region 1 596 . + . ID=NZ_PJUQ01000065.1:1..596;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000065.1 RefSeq gene 1 596 . + . ID=gene-CYJ02_RS12200;Name=CYJ02_RS12200;end_range=596,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12200;old_locus_tag=CYJ02_12200;partial=true;start_range=.,1 NZ_PJUQ01000065.1 Protein Homology CDS 1 596 . + 2 ID=cds-WP_241901352.1;Parent=gene-CYJ02_RS12200;Dbxref=GenBank:WP_241901352.1;Name=WP_241901352.1;end_range=596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12200;partial=true;product=reverse transcriptase domain-containing protein;protein_id=WP_241901352.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000066.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000066.1 RefSeq region 1 745 . + . ID=NZ_PJUQ01000066.1:1..745;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000066.1 RefSeq pseudogene 1 432 . - . ID=gene-CYJ02_RS12205;Name=CYJ02_RS12205;end_range=432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12205;old_locus_tag=CYJ02_12205;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000066.1 Protein Homology CDS 1 432 . - 0 ID=cds-CYJ02_RS12205;Parent=gene-CYJ02_RS12205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ02_RS12205;partial=true;product=SdrD B-like domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000066.1 RefSeq pseudogene 460 717 . - . ID=gene-CYJ02_RS12600;Name=CYJ02_RS12600;end_range=717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12600;partial=true;pseudo=true;start_range=.,460 NZ_PJUQ01000066.1 Protein Homology CDS 460 717 . - 0 ID=cds-CYJ02_RS12600;Parent=gene-CYJ02_RS12600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=717,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028519.7;locus_tag=CYJ02_RS12600;partial=true;product=SdrD B-like domain-containing protein;pseudo=true;start_range=.,460;transl_table=11 ##sequence-region NZ_PJUQ01000067.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000067.1 RefSeq region 1 346 . + . ID=NZ_PJUQ01000067.1:1..346;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N ##sequence-region NZ_PJUQ01000068.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000068.1 RefSeq region 1 962 . + . ID=NZ_PJUQ01000068.1:1..962;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000068.1 RefSeq gene 99 962 . - . ID=gene-CYJ02_RS12210;Name=CYJ02_RS12210;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12210;old_locus_tag=CYJ02_12210;partial=true NZ_PJUQ01000068.1 Protein Homology CDS 99 962 . - 0 ID=cds-WP_101431721.1;Parent=gene-CYJ02_RS12210;Dbxref=GenBank:WP_101431721.1;Name=WP_101431721.1;Ontology_term=GO:0016020;end_range=962,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425441.1;locus_tag=CYJ02_RS12210;partial=true;product=ABC transporter permease;protein_id=WP_101431721.1;transl_table=11 ##sequence-region NZ_PJUQ01000069.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000069.1 RefSeq region 1 440 . + . ID=NZ_PJUQ01000069.1:1..440;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000069.1 RefSeq gene 1 440 . - . ID=gene-CYJ02_RS12215;Name=CYJ02_RS12215;end_range=440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12215;old_locus_tag=CYJ02_12215;partial=true;start_range=.,1 NZ_PJUQ01000069.1 Protein Homology CDS 1 440 . - 1 ID=cds-WP_133121722.1;Parent=gene-CYJ02_RS12215;Dbxref=GenBank:WP_133121722.1;Name=WP_133121722.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=440,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1;locus_tag=CYJ02_RS12215;partial=true;product=transposase;protein_id=WP_133121722.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000007.1 1 150797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000007.1 RefSeq region 1 150797 . + . ID=NZ_PJUQ01000007.1:1..150797;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000007.1 RefSeq pseudogene 1 2269 . - . ID=gene-CYJ02_RS12710;Name=CYJ02_RS12710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12710;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000007.1 Protein Homology CDS 1 2269 . - 0 ID=cds-CYJ02_RS12710;Parent=gene-CYJ02_RS12710;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ02_RS12710;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 2536 3447 . - . ID=gene-CYJ02_RS04610;Name=CYJ02_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04610;old_locus_tag=CYJ02_04610 NZ_PJUQ01000007.1 Protein Homology CDS 2536 3447 . - 0 ID=cds-WP_014613956.1;Parent=gene-CYJ02_RS04610;Dbxref=GenBank:WP_014613956.1;Name=WP_014613956.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613956.1;locus_tag=CYJ02_RS04610;product=CvfB family protein;protein_id=WP_014613956.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 3648 5258 . + . ID=gene-CYJ02_RS04615;Name=CYJ02_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04615;old_locus_tag=CYJ02_04615 NZ_PJUQ01000007.1 Protein Homology CDS 3648 5258 . + 0 ID=cds-WP_014613955.1;Parent=gene-CYJ02_RS04615;Dbxref=GenBank:WP_014613955.1;Name=WP_014613955.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=CYJ02_RS04615;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_014613955.1;transl_table=11 NZ_PJUQ01000007.1 cmsearch riboswitch 5514 5693 . + . ID=id-NZ_PJUQ01000007.1:5514..5693;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000007.1 RefSeq gene 5898 6884 . + . ID=gene-CYJ02_RS04620;Name=CYJ02_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04620;old_locus_tag=CYJ02_04620 NZ_PJUQ01000007.1 Protein Homology CDS 5898 6884 . + 0 ID=cds-WP_014613954.1;Parent=gene-CYJ02_RS04620;Dbxref=GenBank:WP_014613954.1;Name=WP_014613954.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165353.1;locus_tag=CYJ02_RS04620;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_014613954.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 6888 7766 . + . ID=gene-CYJ02_RS04625;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04625;old_locus_tag=CYJ02_04625 NZ_PJUQ01000007.1 Protein Homology CDS 6888 7766 . + 0 ID=cds-WP_014613953.1;Parent=gene-CYJ02_RS04625;Dbxref=GenBank:WP_014613953.1;Name=WP_014613953.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165352.1;locus_tag=CYJ02_RS04625;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_014613953.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 7763 8485 . + . ID=gene-CYJ02_RS04630;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04630;old_locus_tag=CYJ02_04630 NZ_PJUQ01000007.1 Protein Homology CDS 7763 8485 . + 0 ID=cds-WP_014613952.1;Parent=gene-CYJ02_RS04630;Dbxref=GenBank:WP_014613952.1;Name=WP_014613952.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275807.1;locus_tag=CYJ02_RS04630;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_014613952.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 8505 9224 . + . ID=gene-CYJ02_RS04635;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CYJ02_RS04635;old_locus_tag=CYJ02_04635 NZ_PJUQ01000007.1 Protein Homology CDS 8505 9224 . + 0 ID=cds-WP_014613951.1;Parent=gene-CYJ02_RS04635;Dbxref=GenBank:WP_014613951.1;Name=WP_014613951.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613951.1;locus_tag=CYJ02_RS04635;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_014613951.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 9409 10563 . + . ID=gene-CYJ02_RS04640;Name=CYJ02_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04640;old_locus_tag=CYJ02_04640 NZ_PJUQ01000007.1 Protein Homology CDS 9409 10563 . + 0 ID=cds-WP_014613950.1;Parent=gene-CYJ02_RS04640;Dbxref=GenBank:WP_014613950.1;Name=WP_014613950.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613950.1;locus_tag=CYJ02_RS04640;product=M20 metallopeptidase family protein;protein_id=WP_014613950.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 10560 11639 . + . ID=gene-CYJ02_RS04645;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ02_RS04645;old_locus_tag=CYJ02_04645 NZ_PJUQ01000007.1 Protein Homology CDS 10560 11639 . + 0 ID=cds-WP_037543065.1;Parent=gene-CYJ02_RS04645;Dbxref=GenBank:WP_037543065.1;Name=WP_037543065.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729107.1;locus_tag=CYJ02_RS04645;product=alanine racemase;protein_id=WP_037543065.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 11640 12905 . + . ID=gene-CYJ02_RS04650;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04650;old_locus_tag=CYJ02_04650 NZ_PJUQ01000007.1 Protein Homology CDS 11640 12905 . + 0 ID=cds-WP_101431428.1;Parent=gene-CYJ02_RS04650;Dbxref=GenBank:WP_101431428.1;Name=WP_101431428.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=CYJ02_RS04650;product=diaminopimelate decarboxylase;protein_id=WP_101431428.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 13027 13206 . - . ID=gene-CYJ02_RS04655;Name=CYJ02_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04655;old_locus_tag=CYJ02_04655 NZ_PJUQ01000007.1 Protein Homology CDS 13027 13206 . - 0 ID=cds-WP_070407448.1;Parent=gene-CYJ02_RS04655;Dbxref=GenBank:WP_070407448.1;Name=WP_070407448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729109.1;locus_tag=CYJ02_RS04655;product=hypothetical protein;protein_id=WP_070407448.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 13746 13946 . - . ID=gene-CYJ02_RS04660;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=CYJ02_RS04660;old_locus_tag=CYJ02_04660 NZ_PJUQ01000007.1 Protein Homology CDS 13746 13946 . - 0 ID=cds-WP_014613945.1;Parent=gene-CYJ02_RS04660;Dbxref=GenBank:WP_014613945.1;Name=WP_014613945.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CYJ02_RS04660;product=cold shock protein CspA;protein_id=WP_014613945.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 14139 14447 . - . ID=gene-CYJ02_RS04665;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04665;old_locus_tag=CYJ02_04665 NZ_PJUQ01000007.1 Protein Homology CDS 14139 14447 . - 0 ID=cds-WP_014613944.1;Parent=gene-CYJ02_RS04665;Dbxref=GenBank:WP_014613944.1;Name=WP_014613944.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=CYJ02_RS04665;product=regulatory protein MsaA;protein_id=WP_014613944.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 14606 14878 . + . ID=gene-CYJ02_RS04670;Name=CYJ02_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04670;old_locus_tag=CYJ02_04670 NZ_PJUQ01000007.1 Protein Homology CDS 14606 14878 . + 0 ID=cds-WP_101431429.1;Parent=gene-CYJ02_RS04670;Dbxref=GenBank:WP_101431429.1;Name=WP_101431429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167657.1;locus_tag=CYJ02_RS04670;product=acylphosphatase;protein_id=WP_101431429.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 14891 15529 . + . ID=gene-CYJ02_RS04675;Name=CYJ02_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04675;old_locus_tag=CYJ02_04675 NZ_PJUQ01000007.1 Protein Homology CDS 14891 15529 . + 0 ID=cds-WP_101431430.1;Parent=gene-CYJ02_RS04675;Dbxref=GenBank:WP_101431430.1;Name=WP_101431430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165344.1;locus_tag=CYJ02_RS04675;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_101431430.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 15526 16692 . + . ID=gene-CYJ02_RS04680;Name=CYJ02_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04680;old_locus_tag=CYJ02_04680 NZ_PJUQ01000007.1 Protein Homology CDS 15526 16692 . + 0 ID=cds-WP_015729110.1;Parent=gene-CYJ02_RS04680;Dbxref=GenBank:WP_015729110.1;Name=WP_015729110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613941.1;locus_tag=CYJ02_RS04680;product=toxic anion resistance protein;protein_id=WP_015729110.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 16738 16881 . - . ID=gene-CYJ02_RS13010;Name=CYJ02_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13010 NZ_PJUQ01000007.1 GeneMarkS-2+ CDS 16738 16881 . - 0 ID=cds-WP_015729111.1;Parent=gene-CYJ02_RS13010;Dbxref=GenBank:WP_015729111.1;Name=WP_015729111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS13010;product=hypothetical protein;protein_id=WP_015729111.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 16927 17142 . - . ID=gene-CYJ02_RS13015;Name=CYJ02_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13015 NZ_PJUQ01000007.1 Protein Homology CDS 16927 17142 . - 0 ID=cds-WP_020219601.1;Parent=gene-CYJ02_RS13015;Dbxref=GenBank:WP_020219601.1;Name=WP_020219601.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.7;locus_tag=CYJ02_RS13015;product=BCCT family transporter;protein_id=WP_020219601.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 17158 17355 . - . ID=gene-CYJ02_RS13020;Name=CYJ02_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13020 NZ_PJUQ01000007.1 Protein Homology CDS 17158 17355 . - 0 ID=cds-WP_110159113.1;Parent=gene-CYJ02_RS13020;Dbxref=GenBank:WP_110159113.1;Name=WP_110159113.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.7;locus_tag=CYJ02_RS13020;product=BCCT family transporter;protein_id=WP_110159113.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 17499 18845 . - . ID=gene-CYJ02_RS04690;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=CYJ02_RS04690;old_locus_tag=CYJ02_04690 NZ_PJUQ01000007.1 Protein Homology CDS 17499 18845 . - 0 ID=cds-WP_015729113.1;Parent=gene-CYJ02_RS04690;Dbxref=GenBank:WP_015729113.1;Name=WP_015729113.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CYJ02_RS04690;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_015729113.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 18964 20853 . - . ID=gene-CYJ02_RS04695;Name=CYJ02_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04695;old_locus_tag=CYJ02_04695 NZ_PJUQ01000007.1 Protein Homology CDS 18964 20853 . - 0 ID=cds-WP_063284364.1;Parent=gene-CYJ02_RS04695;Dbxref=GenBank:WP_063284364.1;Name=WP_063284364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495031.1;locus_tag=CYJ02_RS04695;product=vWA domain-containing protein;protein_id=WP_063284364.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 20865 21662 . - . ID=gene-CYJ02_RS04700;Name=CYJ02_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04700;old_locus_tag=CYJ02_04700 NZ_PJUQ01000007.1 Protein Homology CDS 20865 21662 . - 0 ID=cds-WP_014613938.1;Parent=gene-CYJ02_RS04700;Dbxref=GenBank:WP_014613938.1;Name=WP_014613938.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=CYJ02_RS04700;product=ATP-binding protein;protein_id=WP_014613938.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 21760 21963 . - . ID=gene-CYJ02_RS04705;Name=CYJ02_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04705;old_locus_tag=CYJ02_04705 NZ_PJUQ01000007.1 Protein Homology CDS 21760 21963 . - 0 ID=cds-WP_014613937.1;Parent=gene-CYJ02_RS04705;Dbxref=GenBank:WP_014613937.1;Name=WP_014613937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=CYJ02_RS04705;product=DUF6501 family protein;protein_id=WP_014613937.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 21967 22791 . - . ID=gene-CYJ02_RS04710;Name=CYJ02_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04710;old_locus_tag=CYJ02_04710 NZ_PJUQ01000007.1 Protein Homology CDS 21967 22791 . - 0 ID=cds-WP_063278733.1;Parent=gene-CYJ02_RS04710;Dbxref=GenBank:WP_063278733.1;Name=WP_063278733.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613936.1;locus_tag=CYJ02_RS04710;product=VOC family protein;protein_id=WP_063278733.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 22856 23095 . - . ID=gene-CYJ02_RS04715;Name=CYJ02_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04715;old_locus_tag=CYJ02_04715 NZ_PJUQ01000007.1 Protein Homology CDS 22856 23095 . - 0 ID=cds-WP_014613935.1;Parent=gene-CYJ02_RS04715;Dbxref=GenBank:WP_014613935.1;Name=WP_014613935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219603.1;locus_tag=CYJ02_RS04715;product=hypothetical protein;protein_id=WP_014613935.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 23294 24571 . - . ID=gene-CYJ02_RS04720;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04720;old_locus_tag=CYJ02_04720 NZ_PJUQ01000007.1 Protein Homology CDS 23294 24571 . - 0 ID=cds-WP_015729116.1;Parent=gene-CYJ02_RS04720;Dbxref=GenBank:WP_015729116.1;Name=WP_015729116.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729116.1;locus_tag=CYJ02_RS04720;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_015729116.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 24586 27372 . - . ID=gene-CYJ02_RS04725;Name=CYJ02_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04725;old_locus_tag=CYJ02_04725 NZ_PJUQ01000007.1 Protein Homology CDS 24586 27372 . - 0 ID=cds-WP_063278735.1;Parent=gene-CYJ02_RS04725;Dbxref=GenBank:WP_063278735.1;Name=WP_063278735.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=CYJ02_RS04725;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_063278735.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 27467 28834 . - . ID=gene-CYJ02_RS04730;Name=CYJ02_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04730;old_locus_tag=CYJ02_04730 NZ_PJUQ01000007.1 Protein Homology CDS 27467 28834 . - 0 ID=cds-WP_015729118.1;Parent=gene-CYJ02_RS04730;Dbxref=GenBank:WP_015729118.1;Name=WP_015729118.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729118.1;locus_tag=CYJ02_RS04730;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_015729118.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 28831 29508 . - . ID=gene-CYJ02_RS04735;Name=CYJ02_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04735;old_locus_tag=CYJ02_04735 NZ_PJUQ01000007.1 Protein Homology CDS 28831 29508 . - 0 ID=cds-WP_014613931.1;Parent=gene-CYJ02_RS04735;Dbxref=GenBank:WP_014613931.1;Name=WP_014613931.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=CYJ02_RS04735;product=response regulator transcription factor;protein_id=WP_014613931.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 30005 30628 . - . ID=gene-CYJ02_RS04740;Name=CYJ02_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04740;old_locus_tag=CYJ02_04740 NZ_PJUQ01000007.1 Protein Homology CDS 30005 30628 . - 0 ID=cds-WP_101431431.1;Parent=gene-CYJ02_RS04740;Dbxref=GenBank:WP_101431431.1;Name=WP_101431431.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729119.1;locus_tag=CYJ02_RS04740;product=phosphatase PAP2 family protein;protein_id=WP_101431431.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 30625 31710 . - . ID=gene-CYJ02_RS04745;Name=CYJ02_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04745;old_locus_tag=CYJ02_04745 NZ_PJUQ01000007.1 Protein Homology CDS 30625 31710 . - 0 ID=cds-WP_101431432.1;Parent=gene-CYJ02_RS04745;Dbxref=GenBank:WP_101431432.1;Name=WP_101431432.1;Ontology_term=GO:0050511;gbkey=CDS;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729120.1;locus_tag=CYJ02_RS04745;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_101431432.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 31720 32235 . - . ID=gene-CYJ02_RS04750;Name=CYJ02_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04750;old_locus_tag=CYJ02_04750 NZ_PJUQ01000007.1 Protein Homology CDS 31720 32235 . - 0 ID=cds-WP_020219604.1;Parent=gene-CYJ02_RS04750;Dbxref=GenBank:WP_020219604.1;Name=WP_020219604.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167642.1;locus_tag=CYJ02_RS04750;product=GNAT family N-acetyltransferase;protein_id=WP_020219604.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 32235 33692 . - . ID=gene-CYJ02_RS04755;Name=CYJ02_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04755;old_locus_tag=CYJ02_04755 NZ_PJUQ01000007.1 Protein Homology CDS 32235 33692 . - 0 ID=cds-WP_063284467.1;Parent=gene-CYJ02_RS04755;Dbxref=GenBank:WP_063284467.1;Name=WP_063284467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342169.1;locus_tag=CYJ02_RS04755;product=S41 family peptidase;protein_id=WP_063284467.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 33815 34036 . - . ID=gene-CYJ02_RS04760;Name=CYJ02_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04760;old_locus_tag=CYJ02_04760 NZ_PJUQ01000007.1 Protein Homology CDS 33815 34036 . - 0 ID=cds-WP_014613926.1;Parent=gene-CYJ02_RS04760;Dbxref=GenBank:WP_014613926.1;Name=WP_014613926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=CYJ02_RS04760;product=YozE family protein;protein_id=WP_014613926.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 34036 34536 . - . ID=gene-CYJ02_RS04765;Name=CYJ02_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04765;old_locus_tag=CYJ02_04765 NZ_PJUQ01000007.1 Protein Homology CDS 34036 34536 . - 0 ID=cds-WP_014613925.1;Parent=gene-CYJ02_RS04765;Dbxref=GenBank:WP_014613925.1;Name=WP_014613925.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=CYJ02_RS04765;product=PTS sugar transporter subunit IIA;protein_id=WP_014613925.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 34550 34978 . - . ID=gene-CYJ02_RS04770;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04770;old_locus_tag=CYJ02_04770 NZ_PJUQ01000007.1 Protein Homology CDS 34550 34978 . - 0 ID=cds-WP_014613924.1;Parent=gene-CYJ02_RS04770;Dbxref=GenBank:WP_014613924.1;Name=WP_014613924.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=CYJ02_RS04770;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_014613924.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 34975 35499 . - . ID=gene-CYJ02_RS04775;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04775;old_locus_tag=CYJ02_04775 NZ_PJUQ01000007.1 Protein Homology CDS 34975 35499 . - 0 ID=cds-WP_014613923.1;Parent=gene-CYJ02_RS04775;Dbxref=GenBank:WP_014613923.1;Name=WP_014613923.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165326.1;locus_tag=CYJ02_RS04775;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014613923.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 35517 36371 . - . ID=gene-CYJ02_RS04780;Name=CYJ02_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04780;old_locus_tag=CYJ02_04780 NZ_PJUQ01000007.1 Protein Homology CDS 35517 36371 . - 0 ID=cds-WP_014613922.1;Parent=gene-CYJ02_RS04780;Dbxref=GenBank:WP_014613922.1;Name=WP_014613922.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=CYJ02_RS04780;product=DegV family protein;protein_id=WP_014613922.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 36390 36869 . - . ID=gene-CYJ02_RS04785;Name=CYJ02_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04785;old_locus_tag=CYJ02_04785 NZ_PJUQ01000007.1 Protein Homology CDS 36390 36869 . - 0 ID=cds-WP_015729124.1;Parent=gene-CYJ02_RS04785;Dbxref=GenBank:WP_015729124.1;Name=WP_015729124.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=CYJ02_RS04785;product=dihydrofolate reductase;protein_id=WP_015729124.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 36888 37841 . - . ID=gene-CYJ02_RS04790;Name=CYJ02_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04790;old_locus_tag=CYJ02_04790 NZ_PJUQ01000007.1 Protein Homology CDS 36888 37841 . - 0 ID=cds-WP_014613920.1;Parent=gene-CYJ02_RS04790;Dbxref=GenBank:WP_014613920.1;Name=WP_014613920.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=CYJ02_RS04790;product=thymidylate synthase;protein_id=WP_014613920.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 38648 39088 . - . ID=gene-CYJ02_RS04795;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04795;old_locus_tag=CYJ02_04795 NZ_PJUQ01000007.1 Protein Homology CDS 38648 39088 . - 0 ID=cds-WP_014613919.1;Parent=gene-CYJ02_RS04795;Dbxref=GenBank:WP_014613919.1;Name=WP_014613919.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=CYJ02_RS04795;product=bacilliredoxin BrxA;protein_id=WP_014613919.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 39113 40231 . - . ID=gene-CYJ02_RS04800;Name=CYJ02_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04800;old_locus_tag=CYJ02_04800 NZ_PJUQ01000007.1 Protein Homology CDS 39113 40231 . - 0 ID=cds-WP_037543040.1;Parent=gene-CYJ02_RS04800;Dbxref=GenBank:WP_037543040.1;Name=WP_037543040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165321.1;locus_tag=CYJ02_RS04800;product=conserved virulence factor C family protein;protein_id=WP_037543040.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 40263 40448 . - . ID=gene-CYJ02_RS04805;Name=CYJ02_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04805;old_locus_tag=CYJ02_04805 NZ_PJUQ01000007.1 Protein Homology CDS 40263 40448 . - 0 ID=cds-WP_014613917.1;Parent=gene-CYJ02_RS04805;Dbxref=GenBank:WP_014613917.1;Name=WP_014613917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=CYJ02_RS04805;product=zinc-finger domain-containing protein;protein_id=WP_014613917.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 40674 41372 . + . ID=gene-CYJ02_RS04810;Name=CYJ02_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04810;old_locus_tag=CYJ02_04810 NZ_PJUQ01000007.1 Protein Homology CDS 40674 41372 . + 0 ID=cds-WP_014613916.1;Parent=gene-CYJ02_RS04810;Dbxref=GenBank:WP_014613916.1;Name=WP_014613916.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167630.1;locus_tag=CYJ02_RS04810;product=queuosine precursor transporter;protein_id=WP_014613916.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 41428 41826 . + . ID=gene-CYJ02_RS04815;Name=CYJ02_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04815;old_locus_tag=CYJ02_04815 NZ_PJUQ01000007.1 Protein Homology CDS 41428 41826 . + 0 ID=cds-WP_020219606.1;Parent=gene-CYJ02_RS04815;Dbxref=GenBank:WP_020219606.1;Name=WP_020219606.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219606.1;locus_tag=CYJ02_RS04815;product=ribonuclease HI family protein;protein_id=WP_020219606.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 41956 42837 . - . ID=gene-CYJ02_RS04820;Name=CYJ02_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04820;old_locus_tag=CYJ02_04820 NZ_PJUQ01000007.1 Protein Homology CDS 41956 42837 . - 0 ID=cds-WP_014613914.1;Parent=gene-CYJ02_RS04820;Dbxref=GenBank:WP_014613914.1;Name=WP_014613914.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729127.1;locus_tag=CYJ02_RS04820;product=5'-3' exonuclease;protein_id=WP_014613914.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 42842 46297 . - . ID=gene-CYJ02_RS04825;Name=CYJ02_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04825;old_locus_tag=CYJ02_04825 NZ_PJUQ01000007.1 Protein Homology CDS 42842 46297 . - 0 ID=cds-WP_101431433.1;Parent=gene-CYJ02_RS04825;Dbxref=GenBank:WP_101431433.1;Name=WP_101431433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=CYJ02_RS04825;product=dynamin family protein;protein_id=WP_101431433.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 46461 47378 . - . ID=gene-CYJ02_RS04830;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CYJ02_RS04830;old_locus_tag=CYJ02_04830 NZ_PJUQ01000007.1 Protein Homology CDS 46461 47378 . - 0 ID=cds-WP_014613912.1;Parent=gene-CYJ02_RS04830;Dbxref=GenBank:WP_014613912.1;Name=WP_014613912.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165315.1;locus_tag=CYJ02_RS04830;product=EamA family transporter RarD;protein_id=WP_014613912.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 47412 48539 . - . ID=gene-CYJ02_RS04835;Name=CYJ02_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04835;old_locus_tag=CYJ02_04835 NZ_PJUQ01000007.1 Protein Homology CDS 47412 48539 . - 0 ID=cds-WP_014613911.1;Parent=gene-CYJ02_RS04835;Dbxref=GenBank:WP_014613911.1;Name=WP_014613911.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219607.1;locus_tag=CYJ02_RS04835;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_014613911.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 48820 49206 . - . ID=gene-CYJ02_RS04840;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CYJ02_RS04840;old_locus_tag=CYJ02_04840 NZ_PJUQ01000007.1 cmsearch RNase_P_RNA 48820 49206 . - . ID=rna-CYJ02_RS04840;Parent=gene-CYJ02_RS04840;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS04840;product=RNase P RNA component class B NZ_PJUQ01000007.1 cmsearch exon 48820 49206 . - . ID=exon-CYJ02_RS04840-1;Parent=rna-CYJ02_RS04840;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS04840;product=RNase P RNA component class B NZ_PJUQ01000007.1 RefSeq gene 49248 49583 . - . ID=gene-CYJ02_RS04845;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04845;old_locus_tag=CYJ02_04845 NZ_PJUQ01000007.1 Protein Homology CDS 49248 49583 . - 0 ID=cds-WP_014613910.1;Parent=gene-CYJ02_RS04845;Dbxref=GenBank:WP_014613910.1;Name=WP_014613910.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CYJ02_RS04845;product=cell division regulator GpsB;protein_id=WP_014613910.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 49603 50160 . - . ID=gene-CYJ02_RS04850;Name=CYJ02_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04850;old_locus_tag=CYJ02_04850 NZ_PJUQ01000007.1 Protein Homology CDS 49603 50160 . - 0 ID=cds-WP_063278740.1;Parent=gene-CYJ02_RS04850;Dbxref=GenBank:WP_063278740.1;Name=WP_063278740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165313.1;locus_tag=CYJ02_RS04850;product=SLOG family protein;protein_id=WP_063278740.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 50153 50494 . - . ID=gene-CYJ02_RS04855;Name=CYJ02_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04855;old_locus_tag=CYJ02_04855 NZ_PJUQ01000007.1 Protein Homology CDS 50153 50494 . - 0 ID=cds-WP_014613908.1;Parent=gene-CYJ02_RS04855;Dbxref=GenBank:WP_014613908.1;Name=WP_014613908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613908.1;locus_tag=CYJ02_RS04855;product=DUF1798 family protein;protein_id=WP_014613908.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 50690 51316 . + . ID=gene-CYJ02_RS04860;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=CYJ02_RS04860;old_locus_tag=CYJ02_04860 NZ_PJUQ01000007.1 Protein Homology CDS 50690 51316 . + 0 ID=cds-WP_014613907.1;Parent=gene-CYJ02_RS04860;Dbxref=GenBank:WP_014613907.1;Name=WP_014613907.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=CYJ02_RS04860;product=Holliday junction resolvase RecU;protein_id=WP_014613907.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 51313 53535 . + . ID=gene-CYJ02_RS04865;Name=CYJ02_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04865;old_locus_tag=CYJ02_04865 NZ_PJUQ01000007.1 Protein Homology CDS 51313 53535 . + 0 ID=cds-WP_014613906.1;Parent=gene-CYJ02_RS04865;Dbxref=GenBank:WP_014613906.1;Name=WP_014613906.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165310.1;locus_tag=CYJ02_RS04865;product=transglycosylase domain-containing protein;protein_id=WP_014613906.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 54217 54552 . - . ID=gene-CYJ02_RS04870;Name=CYJ02_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04870;old_locus_tag=CYJ02_04870 NZ_PJUQ01000007.1 Protein Homology CDS 54217 54552 . - 0 ID=cds-WP_014613905.1;Parent=gene-CYJ02_RS04870;Dbxref=GenBank:WP_014613905.1;Name=WP_014613905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613905.1;locus_tag=CYJ02_RS04870;product=YpoC family protein;protein_id=WP_014613905.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 54549 55223 . - . ID=gene-CYJ02_RS04875;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CYJ02_RS04875;old_locus_tag=CYJ02_04875 NZ_PJUQ01000007.1 Protein Homology CDS 54549 55223 . - 0 ID=cds-WP_015729131.1;Parent=gene-CYJ02_RS04875;Dbxref=GenBank:WP_015729131.1;Name=WP_015729131.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=CYJ02_RS04875;product=endonuclease III;protein_id=WP_015729131.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 55213 55905 . - . ID=gene-CYJ02_RS04880;Name=CYJ02_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04880;old_locus_tag=CYJ02_04880 NZ_PJUQ01000007.1 Protein Homology CDS 55213 55905 . - 0 ID=cds-WP_014613903.1;Parent=gene-CYJ02_RS04880;Dbxref=GenBank:WP_014613903.1;Name=WP_014613903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=CYJ02_RS04880;product=DnaD domain-containing protein;protein_id=WP_014613903.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 56080 57372 . - . ID=gene-CYJ02_RS04885;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CYJ02_RS04885;old_locus_tag=CYJ02_04885 NZ_PJUQ01000007.1 Protein Homology CDS 56080 57372 . - 0 ID=cds-WP_014613902.1;Parent=gene-CYJ02_RS04885;Dbxref=GenBank:WP_014613902.1;Name=WP_014613902.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=CYJ02_RS04885;product=asparagine--tRNA ligase;protein_id=WP_014613902.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 57440 60142 . - . ID=gene-CYJ02_RS04890;Name=CYJ02_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04890;old_locus_tag=CYJ02_04890 NZ_PJUQ01000007.1 Protein Homology CDS 57440 60142 . - 0 ID=cds-WP_063278744.1;Parent=gene-CYJ02_RS04890;Dbxref=GenBank:WP_063278744.1;Name=WP_063278744.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729132.1;locus_tag=CYJ02_RS04890;product=helicase C-terminal domain-containing protein;protein_id=WP_063278744.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 60170 61141 . - . ID=gene-CYJ02_RS04895;Name=CYJ02_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04895;old_locus_tag=CYJ02_04895 NZ_PJUQ01000007.1 Protein Homology CDS 60170 61141 . - 0 ID=cds-WP_015729133.1;Parent=gene-CYJ02_RS04895;Dbxref=GenBank:WP_015729133.1;Name=WP_015729133.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165304.1;locus_tag=CYJ02_RS04895;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_015729133.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 61125 62327 . - . ID=gene-CYJ02_RS04900;Name=CYJ02_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04900;old_locus_tag=CYJ02_04900 NZ_PJUQ01000007.1 Protein Homology CDS 61125 62327 . - 0 ID=cds-WP_101431434.1;Parent=gene-CYJ02_RS04900;Dbxref=GenBank:WP_101431434.1;Name=WP_101431434.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219610.1;locus_tag=CYJ02_RS04900;product=CCA tRNA nucleotidyltransferase;protein_id=WP_101431434.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 62331 63455 . - . ID=gene-CYJ02_RS04905;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04905;old_locus_tag=CYJ02_04905 NZ_PJUQ01000007.1 Protein Homology CDS 62331 63455 . - 0 ID=cds-WP_014613898.1;Parent=gene-CYJ02_RS04905;Dbxref=GenBank:WP_014613898.1;Name=WP_014613898.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165302.1;locus_tag=CYJ02_RS04905;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_014613898.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 63471 63794 . - . ID=gene-CYJ02_RS04910;Name=CYJ02_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04910;old_locus_tag=CYJ02_04910 NZ_PJUQ01000007.1 Protein Homology CDS 63471 63794 . - 0 ID=cds-WP_014613897.1;Parent=gene-CYJ02_RS04910;Dbxref=GenBank:WP_014613897.1;Name=WP_014613897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167611.1;locus_tag=CYJ02_RS04910;product=nucleotide pyrophosphohydrolase;protein_id=WP_014613897.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 63974 64672 . - . ID=gene-CYJ02_RS04915;Name=CYJ02_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04915;old_locus_tag=CYJ02_04915 NZ_PJUQ01000007.1 Protein Homology CDS 63974 64672 . - 0 ID=cds-WP_014613896.1;Parent=gene-CYJ02_RS04915;Dbxref=GenBank:WP_014613896.1;Name=WP_014613896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613896.1;locus_tag=CYJ02_RS04915;product=zinc metallopeptidase;protein_id=WP_014613896.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 64711 65304 . - . ID=gene-CYJ02_RS04920;Name=CYJ02_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04920;old_locus_tag=CYJ02_04920 NZ_PJUQ01000007.1 Protein Homology CDS 64711 65304 . - 0 ID=cds-WP_014613895.1;Parent=gene-CYJ02_RS04920;Dbxref=GenBank:WP_014613895.1;Name=WP_014613895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613895.1;locus_tag=CYJ02_RS04920;product=DUF1405 domain-containing protein;protein_id=WP_014613895.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 65333 65890 . - . ID=gene-CYJ02_RS04925;Name=CYJ02_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04925;old_locus_tag=CYJ02_04925 NZ_PJUQ01000007.1 Protein Homology CDS 65333 65890 . - 0 ID=cds-WP_065354222.1;Parent=gene-CYJ02_RS04925;Dbxref=GenBank:WP_065354222.1;Name=WP_065354222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729137.1;locus_tag=CYJ02_RS04925;product=YpiB family protein;protein_id=WP_065354222.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 65902 67143 . - . ID=gene-CYJ02_RS04930;Name=CYJ02_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04930;old_locus_tag=CYJ02_04930 NZ_PJUQ01000007.1 Protein Homology CDS 65902 67143 . - 0 ID=cds-WP_014613893.1;Parent=gene-CYJ02_RS04930;Dbxref=GenBank:WP_014613893.1;Name=WP_014613893.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=CYJ02_RS04930;product=tetratricopeptide repeat protein;protein_id=WP_014613893.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 67145 68434 . - . ID=gene-CYJ02_RS04935;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04935;old_locus_tag=CYJ02_04935 NZ_PJUQ01000007.1 Protein Homology CDS 67145 68434 . - 0 ID=cds-WP_020219612.1;Parent=gene-CYJ02_RS04935;Dbxref=GenBank:WP_020219612.1;Name=WP_020219612.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=CYJ02_RS04935;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_020219612.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 68435 69508 . - . ID=gene-CYJ02_RS04940;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CYJ02_RS04940;old_locus_tag=CYJ02_04940 NZ_PJUQ01000007.1 Protein Homology CDS 68435 69508 . - 0 ID=cds-WP_014613891.1;Parent=gene-CYJ02_RS04940;Dbxref=GenBank:WP_014613891.1;Name=WP_014613891.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=CYJ02_RS04940;product=3-dehydroquinate synthase;protein_id=WP_014613891.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 69525 70691 . - . ID=gene-CYJ02_RS04945;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CYJ02_RS04945;old_locus_tag=CYJ02_04945 NZ_PJUQ01000007.1 Protein Homology CDS 69525 70691 . - 0 ID=cds-WP_101431446.1;Parent=gene-CYJ02_RS04945;Dbxref=GenBank:WP_101431446.1;Name=WP_101431446.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=CYJ02_RS04945;product=chorismate synthase;protein_id=WP_101431446.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 70970 71422 . - . ID=gene-CYJ02_RS04950;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CYJ02_RS04950;old_locus_tag=CYJ02_04950 NZ_PJUQ01000007.1 Protein Homology CDS 70970 71422 . - 0 ID=cds-WP_014613889.1;Parent=gene-CYJ02_RS04950;Dbxref=GenBank:WP_014613889.1;Name=WP_014613889.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165294.1;locus_tag=CYJ02_RS04950;product=nucleoside-diphosphate kinase;protein_id=WP_014613889.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 71504 72460 . - . ID=gene-CYJ02_RS04955;Name=CYJ02_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04955;old_locus_tag=CYJ02_04955 NZ_PJUQ01000007.1 Protein Homology CDS 71504 72460 . - 0 ID=cds-WP_014613888.1;Parent=gene-CYJ02_RS04955;Dbxref=GenBank:WP_014613888.1;Name=WP_014613888.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=CYJ02_RS04955;product=polyprenyl synthetase family protein;protein_id=WP_014613888.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 72478 73191 . - . ID=gene-CYJ02_RS04960;Name=CYJ02_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04960;old_locus_tag=CYJ02_04960 NZ_PJUQ01000007.1 Protein Homology CDS 72478 73191 . - 0 ID=cds-WP_020219613.1;Parent=gene-CYJ02_RS04960;Dbxref=GenBank:WP_020219613.1;Name=WP_020219613.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613887.1;locus_tag=CYJ02_RS04960;product=demethylmenaquinone methyltransferase;protein_id=WP_020219613.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 73201 73770 . - . ID=gene-CYJ02_RS04965;Name=CYJ02_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04965;old_locus_tag=CYJ02_04965 NZ_PJUQ01000007.1 Protein Homology CDS 73201 73770 . - 0 ID=cds-WP_070407432.1;Parent=gene-CYJ02_RS04965;Dbxref=GenBank:WP_070407432.1;Name=WP_070407432.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613886.1;locus_tag=CYJ02_RS04965;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_070407432.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 74247 74519 . - . ID=gene-CYJ02_RS04970;Name=CYJ02_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04970;old_locus_tag=CYJ02_04970 NZ_PJUQ01000007.1 Protein Homology CDS 74247 74519 . - 0 ID=cds-WP_014613885.1;Parent=gene-CYJ02_RS04970;Dbxref=GenBank:WP_014613885.1;Name=WP_014613885.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CYJ02_RS04970;product=HU family DNA-binding protein;protein_id=WP_014613885.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 74690 75688 . - . ID=gene-CYJ02_RS04975;Name=CYJ02_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04975;old_locus_tag=CYJ02_04975 NZ_PJUQ01000007.1 Protein Homology CDS 74690 75688 . - 0 ID=cds-WP_101431435.1;Parent=gene-CYJ02_RS04975;Dbxref=GenBank:WP_101431435.1;Name=WP_101431435.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275732.1;locus_tag=CYJ02_RS04975;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_101431435.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 75704 77014 . - . ID=gene-CYJ02_RS04980;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CYJ02_RS04980;old_locus_tag=CYJ02_04980 NZ_PJUQ01000007.1 Protein Homology CDS 75704 77014 . - 0 ID=cds-WP_014613883.1;Parent=gene-CYJ02_RS04980;Dbxref=GenBank:WP_014613883.1;Name=WP_014613883.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CYJ02_RS04980;product=ribosome biogenesis GTPase Der;protein_id=WP_014613883.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 77381 78565 . - . ID=gene-CYJ02_RS04985;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS04985;old_locus_tag=CYJ02_04985 NZ_PJUQ01000007.1 Protein Homology CDS 77381 78565 . - 0 ID=cds-WP_101431436.1;Parent=gene-CYJ02_RS04985;Dbxref=GenBank:WP_101431436.1;Name=WP_101431436.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729140.1;locus_tag=CYJ02_RS04985;product=30S ribosomal protein S1;protein_id=WP_101431436.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 78654 79313 . - . ID=gene-CYJ02_RS04990;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CYJ02_RS04990;old_locus_tag=CYJ02_04990 NZ_PJUQ01000007.1 Protein Homology CDS 78654 79313 . - 0 ID=cds-WP_014613881.1;Parent=gene-CYJ02_RS04990;Dbxref=GenBank:WP_014613881.1;Name=WP_014613881.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613881.1;locus_tag=CYJ02_RS04990;product=(d)CMP kinase;protein_id=WP_014613881.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 79387 80355 . + . ID=gene-CYJ02_RS04995;Name=CYJ02_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS04995;old_locus_tag=CYJ02_04995 NZ_PJUQ01000007.1 Protein Homology CDS 79387 80355 . + 0 ID=cds-WP_015729141.1;Parent=gene-CYJ02_RS04995;Dbxref=GenBank:WP_015729141.1;Name=WP_015729141.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=CYJ02_RS04995;product=asparaginase;protein_id=WP_015729141.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 80652 81638 . - . ID=gene-CYJ02_RS05000;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05000;old_locus_tag=CYJ02_05000 NZ_PJUQ01000007.1 Protein Homology CDS 80652 81638 . - 0 ID=cds-WP_063284378.1;Parent=gene-CYJ02_RS05000;Dbxref=GenBank:WP_063284378.1;Name=WP_063284378.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CYJ02_RS05000;product=bacillithiol disulfide reductase YpdA;protein_id=WP_063284378.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 81884 83239 . - . ID=gene-CYJ02_RS05005;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=CYJ02_RS05005;old_locus_tag=CYJ02_05005 NZ_PJUQ01000007.1 Protein Homology CDS 81884 83239 . - 0 ID=cds-WP_065354219.1;Parent=gene-CYJ02_RS05005;Dbxref=GenBank:WP_065354219.1;Name=WP_065354219.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729142.1;locus_tag=CYJ02_RS05005;product=elastin-binding protein EbpS;protein_id=WP_065354219.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 83414 84790 . - . ID=gene-CYJ02_RS05010;Name=CYJ02_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05010;old_locus_tag=CYJ02_05010 NZ_PJUQ01000007.1 Protein Homology CDS 83414 84790 . - 0 ID=cds-WP_015729143.1;Parent=gene-CYJ02_RS05010;Dbxref=GenBank:WP_015729143.1;Name=WP_015729143.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165281.1;locus_tag=CYJ02_RS05010;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_015729143.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 84783 85730 . - . ID=gene-CYJ02_RS05015;Name=CYJ02_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05015;old_locus_tag=CYJ02_05015 NZ_PJUQ01000007.1 Protein Homology CDS 84783 85730 . - 0 ID=cds-WP_037542991.1;Parent=gene-CYJ02_RS05015;Dbxref=GenBank:WP_037542991.1;Name=WP_037542991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165280.1;locus_tag=CYJ02_RS05015;product=helix-turn-helix domain-containing protein;protein_id=WP_037542991.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 85832 86080 . + . ID=gene-CYJ02_RS05020;Name=CYJ02_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05020;old_locus_tag=CYJ02_05020 NZ_PJUQ01000007.1 Protein Homology CDS 85832 86080 . + 0 ID=cds-WP_014613875.1;Parent=gene-CYJ02_RS05020;Dbxref=GenBank:WP_014613875.1;Name=WP_014613875.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CYJ02_RS05020;product=ferredoxin;protein_id=WP_014613875.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 86342 86887 . - . ID=gene-CYJ02_RS05025;Name=CYJ02_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05025;old_locus_tag=CYJ02_05025 NZ_PJUQ01000007.1 Protein Homology CDS 86342 86887 . - 0 ID=cds-WP_014613874.1;Parent=gene-CYJ02_RS05025;Dbxref=GenBank:WP_014613874.1;Name=WP_014613874.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168748.1;locus_tag=CYJ02_RS05025;product=ECF transporter S component;protein_id=WP_014613874.1;transl_table=11 NZ_PJUQ01000007.1 cmsearch riboswitch 86953 87091 . - . ID=id-NZ_PJUQ01000007.1:86953..87091;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000007.1 RefSeq gene 87247 89004 . - . ID=gene-CYJ02_RS05030;Name=CYJ02_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05030;old_locus_tag=CYJ02_05030 NZ_PJUQ01000007.1 Protein Homology CDS 87247 89004 . - 0 ID=cds-WP_101431437.1;Parent=gene-CYJ02_RS05030;Dbxref=GenBank:WP_101431437.1;Name=WP_101431437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=CYJ02_RS05030;product=ATP-binding protein;protein_id=WP_101431437.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 88991 89713 . - . ID=gene-CYJ02_RS05035;Name=CYJ02_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05035;old_locus_tag=CYJ02_05035 NZ_PJUQ01000007.1 Protein Homology CDS 88991 89713 . - 0 ID=cds-WP_026066968.1;Parent=gene-CYJ02_RS05035;Dbxref=GenBank:WP_026066968.1;Name=WP_026066968.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724528.1;locus_tag=CYJ02_RS05035;product=response regulator transcription factor;protein_id=WP_026066968.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 89825 90571 . - . ID=gene-CYJ02_RS05040;Name=CYJ02_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05040;old_locus_tag=CYJ02_05040 NZ_PJUQ01000007.1 Protein Homology CDS 89825 90571 . - 0 ID=cds-WP_063282605.1;Parent=gene-CYJ02_RS05040;Dbxref=GenBank:WP_063282605.1;Name=WP_063282605.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165277.1;locus_tag=CYJ02_RS05040;product=pseudouridine synthase;protein_id=WP_063282605.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 90572 91114 . - . ID=gene-CYJ02_RS05045;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05045;old_locus_tag=CYJ02_05045 NZ_PJUQ01000007.1 Protein Homology CDS 90572 91114 . - 0 ID=cds-WP_014613870.1;Parent=gene-CYJ02_RS05045;Dbxref=GenBank:WP_014613870.1;Name=WP_014613870.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=CYJ02_RS05045;product=SMC-Scp complex subunit ScpB;protein_id=WP_014613870.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 91104 91832 . - . ID=gene-CYJ02_RS05050;Name=CYJ02_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05050;old_locus_tag=CYJ02_05050 NZ_PJUQ01000007.1 Protein Homology CDS 91104 91832 . - 0 ID=cds-WP_070407430.1;Parent=gene-CYJ02_RS05050;Dbxref=GenBank:WP_070407430.1;Name=WP_070407430.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168744.1;locus_tag=CYJ02_RS05050;product=segregation and condensation protein A;protein_id=WP_070407430.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 91927 92433 . + . ID=gene-CYJ02_RS05055;Name=CYJ02_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05055;old_locus_tag=CYJ02_05055 NZ_PJUQ01000007.1 Protein Homology CDS 91927 92433 . + 0 ID=cds-WP_063284384.1;Parent=gene-CYJ02_RS05055;Dbxref=GenBank:WP_063284384.1;Name=WP_063284384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613868.1;locus_tag=CYJ02_RS05055;product=DUF309 domain-containing protein;protein_id=WP_063284384.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 92720 93607 . - . ID=gene-CYJ02_RS05060;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CYJ02_RS05060;old_locus_tag=CYJ02_05060 NZ_PJUQ01000007.1 Protein Homology CDS 92720 93607 . - 0 ID=cds-WP_014613866.1;Parent=gene-CYJ02_RS05060;Dbxref=GenBank:WP_014613866.1;Name=WP_014613866.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447735.1;locus_tag=CYJ02_RS05060;product=site-specific tyrosine recombinase XerD;protein_id=WP_014613866.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 93647 94102 . - . ID=gene-CYJ02_RS05065;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CYJ02_RS05065;old_locus_tag=CYJ02_05065 NZ_PJUQ01000007.1 Protein Homology CDS 93647 94102 . - 0 ID=cds-WP_014613865.1;Parent=gene-CYJ02_RS05065;Dbxref=GenBank:WP_014613865.1;Name=WP_014613865.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613865.1;locus_tag=CYJ02_RS05065;product=ferric iron uptake transcriptional regulator;protein_id=WP_014613865.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 94207 94749 . - . ID=gene-CYJ02_RS05070;Name=CYJ02_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05070;old_locus_tag=CYJ02_05070 NZ_PJUQ01000007.1 Protein Homology CDS 94207 94749 . - 0 ID=cds-WP_014613864.1;Parent=gene-CYJ02_RS05070;Dbxref=GenBank:WP_014613864.1;Name=WP_014613864.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613864.1;locus_tag=CYJ02_RS05070;product=NUDIX hydrolase;protein_id=WP_014613864.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 94829 95749 . + . ID=gene-CYJ02_RS05075;Name=CYJ02_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05075;old_locus_tag=CYJ02_05075 NZ_PJUQ01000007.1 Protein Homology CDS 94829 95749 . + 0 ID=cds-WP_015729146.1;Parent=gene-CYJ02_RS05075;Dbxref=GenBank:WP_015729146.1;Name=WP_015729146.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613863.1;locus_tag=CYJ02_RS05075;product=aldo/keto reductase;protein_id=WP_015729146.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 95746 96501 . - . ID=gene-CYJ02_RS05080;Name=CYJ02_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05080;old_locus_tag=CYJ02_05080 NZ_PJUQ01000007.1 Protein Homology CDS 95746 96501 . - 0 ID=cds-WP_070407428.1;Parent=gene-CYJ02_RS05080;Dbxref=GenBank:WP_070407428.1;Name=WP_070407428.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729147.1;locus_tag=CYJ02_RS05080;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_070407428.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 96587 97402 . + . ID=gene-CYJ02_RS05085;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05085;old_locus_tag=CYJ02_05085 NZ_PJUQ01000007.1 Protein Homology CDS 96587 97402 . + 0 ID=cds-WP_014613861.1;Parent=gene-CYJ02_RS05085;Dbxref=GenBank:WP_014613861.1;Name=WP_014613861.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613861.1;locus_tag=CYJ02_RS05085;product=pyrroline-5-carboxylate reductase;protein_id=WP_014613861.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 97527 98444 . - . ID=gene-CYJ02_RS05090;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CYJ02_RS05090;old_locus_tag=CYJ02_05090 NZ_PJUQ01000007.1 Protein Homology CDS 97527 98444 . - 0 ID=cds-WP_014613860.1;Parent=gene-CYJ02_RS05090;Dbxref=GenBank:WP_014613860.1;Name=WP_014613860.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165266.1;locus_tag=CYJ02_RS05090;product=ribonuclease Z;protein_id=WP_014613860.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 98600 100084 . + . ID=gene-CYJ02_RS05095;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CYJ02_RS05095;old_locus_tag=CYJ02_05095 NZ_PJUQ01000007.1 Protein Homology CDS 98600 100084 . + 0 ID=cds-WP_070407427.1;Parent=gene-CYJ02_RS05095;Dbxref=GenBank:WP_070407427.1;Name=WP_070407427.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165265.1;locus_tag=CYJ02_RS05095;product=glucose-6-phosphate dehydrogenase;protein_id=WP_070407427.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 100225 101082 . + . ID=gene-CYJ02_RS05100;Name=CYJ02_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05100;old_locus_tag=CYJ02_05100 NZ_PJUQ01000007.1 Protein Homology CDS 100225 101082 . + 0 ID=cds-WP_014613858.1;Parent=gene-CYJ02_RS05100;Dbxref=GenBank:WP_014613858.1;Name=WP_014613858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168734.1;locus_tag=CYJ02_RS05100;product=AraC family transcriptional regulator;protein_id=WP_014613858.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 101264 101533 . + . ID=gene-CYJ02_RS05105;Name=CYJ02_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05105;old_locus_tag=CYJ02_05105 NZ_PJUQ01000007.1 Protein Homology CDS 101264 101533 . + 0 ID=cds-WP_226957563.1;Parent=gene-CYJ02_RS05105;Dbxref=GenBank:WP_226957563.1;Name=WP_226957563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729149.1;locus_tag=CYJ02_RS05105;product=MFS transporter;protein_id=WP_226957563.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 101682 102152 . + . ID=gene-CYJ02_RS12380;Name=CYJ02_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12380;old_locus_tag=CYJ02_05110 NZ_PJUQ01000007.1 Protein Homology CDS 101682 102152 . + 0 ID=cds-WP_070407426.1;Parent=gene-CYJ02_RS12380;Dbxref=GenBank:WP_070407426.1;Name=WP_070407426.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ02_RS12380;product=MFS transporter;protein_id=WP_070407426.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 102179 102454 . + . ID=gene-CYJ02_RS05115;Name=CYJ02_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05115;old_locus_tag=CYJ02_05115 NZ_PJUQ01000007.1 Protein Homology CDS 102179 102454 . + 0 ID=cds-WP_015729151.1;Parent=gene-CYJ02_RS05115;Dbxref=GenBank:WP_015729151.1;Name=WP_015729151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729151.1;locus_tag=CYJ02_RS05115;product=MFS transporter;protein_id=WP_015729151.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 102512 103915 . - . ID=gene-CYJ02_RS05120;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05120;old_locus_tag=CYJ02_05120 NZ_PJUQ01000007.1 Protein Homology CDS 102512 103915 . - 0 ID=cds-WP_014613855.1;Parent=gene-CYJ02_RS05120;Dbxref=GenBank:WP_014613855.1;Name=WP_014613855.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=CYJ02_RS05120;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_014613855.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 103989 105104 . - . ID=gene-CYJ02_RS05125;Name=CYJ02_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05125;old_locus_tag=CYJ02_05125 NZ_PJUQ01000007.1 Protein Homology CDS 103989 105104 . - 0 ID=cds-WP_101431438.1;Parent=gene-CYJ02_RS05125;Dbxref=GenBank:WP_101431438.1;Name=WP_101431438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613854.1;locus_tag=CYJ02_RS05125;product=tripeptidase T;protein_id=WP_101431438.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 105275 105376 . + . ID=gene-CYJ02_RS12385;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=CYJ02_RS12385 NZ_PJUQ01000007.1 Protein Homology CDS 105275 105376 . + 0 ID=cds-WP_019165260.1;Parent=gene-CYJ02_RS12385;Dbxref=GenBank:WP_019165260.1;Name=WP_019165260.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=CYJ02_RS12385;product=stressosome-associated protein Prli42;protein_id=WP_019165260.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 105433 106410 . - . ID=gene-CYJ02_RS05130;Name=CYJ02_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05130;old_locus_tag=CYJ02_05130 NZ_PJUQ01000007.1 Protein Homology CDS 105433 106410 . - 0 ID=cds-WP_070407424.1;Parent=gene-CYJ02_RS05130;Dbxref=GenBank:WP_070407424.1;Name=WP_070407424.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=CYJ02_RS05130;product=aromatic acid exporter family protein;protein_id=WP_070407424.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 106421 106858 . - . ID=gene-CYJ02_RS05135;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05135;old_locus_tag=CYJ02_05135 NZ_PJUQ01000007.1 Protein Homology CDS 106421 106858 . - 0 ID=cds-WP_014613852.1;Parent=gene-CYJ02_RS05135;Dbxref=GenBank:WP_014613852.1;Name=WP_014613852.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=CYJ02_RS05135;product=bacilliredoxin BrxB;protein_id=WP_014613852.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 107084 108358 . - . ID=gene-CYJ02_RS05140;Name=CYJ02_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05140;old_locus_tag=CYJ02_05140 NZ_PJUQ01000007.1 Protein Homology CDS 107084 108358 . - 0 ID=cds-WP_101431439.1;Parent=gene-CYJ02_RS05140;Dbxref=GenBank:WP_101431439.1;Name=WP_101431439.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=CYJ02_RS05140;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_101431439.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 108371 109354 . - . ID=gene-CYJ02_RS05145;Name=CYJ02_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05145;old_locus_tag=CYJ02_05145 NZ_PJUQ01000007.1 Protein Homology CDS 108371 109354 . - 0 ID=cds-WP_014613850.1;Parent=gene-CYJ02_RS05145;Dbxref=GenBank:WP_014613850.1;Name=WP_014613850.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=CYJ02_RS05145;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014613850.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 109347 110345 . - . ID=gene-CYJ02_RS05150;Name=CYJ02_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05150;old_locus_tag=CYJ02_05150 NZ_PJUQ01000007.1 Protein Homology CDS 109347 110345 . - 0 ID=cds-WP_014613849.1;Parent=gene-CYJ02_RS05150;Dbxref=GenBank:WP_014613849.1;Name=WP_014613849.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=CYJ02_RS05150;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014613849.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 110367 111785 . - . ID=gene-CYJ02_RS05155;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05155;old_locus_tag=CYJ02_05155 NZ_PJUQ01000007.1 Protein Homology CDS 110367 111785 . - 0 ID=cds-WP_101431440.1;Parent=gene-CYJ02_RS05155;Dbxref=GenBank:WP_101431440.1;Name=WP_101431440.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=CYJ02_RS05155;product=dihydrolipoyl dehydrogenase;protein_id=WP_101431440.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 111796 112854 . - . ID=gene-CYJ02_RS05160;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=CYJ02_RS05160;old_locus_tag=CYJ02_05160 NZ_PJUQ01000007.1 Protein Homology CDS 111796 112854 . - 0 ID=cds-WP_101431441.1;Parent=gene-CYJ02_RS05160;Dbxref=GenBank:WP_101431441.1;Name=WP_101431441.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613847.1;locus_tag=CYJ02_RS05160;product=butyrate kinase;protein_id=WP_101431441.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 113428 114321 . - . ID=gene-CYJ02_RS05165;Name=CYJ02_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05165;old_locus_tag=CYJ02_05165 NZ_PJUQ01000007.1 Protein Homology CDS 113428 114321 . - 0 ID=cds-WP_101431442.1;Parent=gene-CYJ02_RS05165;Dbxref=GenBank:WP_101431442.1;Name=WP_101431442.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613846.1;locus_tag=CYJ02_RS05165;product=phosphate acyltransferase;protein_id=WP_101431442.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 114328 116010 . - . ID=gene-CYJ02_RS05170;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CYJ02_RS05170;old_locus_tag=CYJ02_05170 NZ_PJUQ01000007.1 Protein Homology CDS 114328 116010 . - 0 ID=cds-WP_101431443.1;Parent=gene-CYJ02_RS05170;Dbxref=GenBank:WP_101431443.1;Name=WP_101431443.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729156.1;locus_tag=CYJ02_RS05170;product=DNA repair protein RecN;protein_id=WP_101431443.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 116024 116476 . - . ID=gene-CYJ02_RS05175;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=CYJ02_RS05175;old_locus_tag=CYJ02_05175 NZ_PJUQ01000007.1 Protein Homology CDS 116024 116476 . - 0 ID=cds-WP_014613844.1;Parent=gene-CYJ02_RS05175;Dbxref=GenBank:WP_014613844.1;Name=WP_014613844.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=CYJ02_RS05175;product=transcriptional regulator AhrC/ArgR;protein_id=WP_014613844.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 116761 118629 . - . ID=gene-CYJ02_RS05180;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CYJ02_RS05180;old_locus_tag=CYJ02_05180 NZ_PJUQ01000007.1 Protein Homology CDS 116761 118629 . - 0 ID=cds-WP_037542957.1;Parent=gene-CYJ02_RS05180;Dbxref=GenBank:WP_037542957.1;Name=WP_037542957.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219621.1;locus_tag=CYJ02_RS05180;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_037542957.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 118699 119580 . - . ID=gene-CYJ02_RS05185;Name=CYJ02_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05185;old_locus_tag=CYJ02_05185 NZ_PJUQ01000007.1 Protein Homology CDS 118699 119580 . - 0 ID=cds-WP_041613228.1;Parent=gene-CYJ02_RS05185;Dbxref=GenBank:WP_041613228.1;Name=WP_041613228.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729158.1;locus_tag=CYJ02_RS05185;product=polyprenyl synthetase family protein;protein_id=WP_041613228.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 119561 119785 . - . ID=gene-CYJ02_RS05190;Name=CYJ02_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05190;old_locus_tag=CYJ02_05190 NZ_PJUQ01000007.1 Protein Homology CDS 119561 119785 . - 0 ID=cds-WP_014613841.1;Parent=gene-CYJ02_RS05190;Dbxref=GenBank:WP_014613841.1;Name=WP_014613841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=CYJ02_RS05190;product=exodeoxyribonuclease VII small subunit;protein_id=WP_014613841.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 119769 121115 . - . ID=gene-CYJ02_RS05195;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05195;old_locus_tag=CYJ02_05195 NZ_PJUQ01000007.1 Protein Homology CDS 119769 121115 . - 0 ID=cds-WP_014613840.1;Parent=gene-CYJ02_RS05195;Dbxref=GenBank:WP_014613840.1;Name=WP_014613840.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=CYJ02_RS05195;product=exodeoxyribonuclease VII large subunit;protein_id=WP_014613840.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 121124 121516 . - . ID=gene-CYJ02_RS05200;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05200;old_locus_tag=CYJ02_05200 NZ_PJUQ01000007.1 Protein Homology CDS 121124 121516 . - 0 ID=cds-WP_096533263.1;Parent=gene-CYJ02_RS05200;Dbxref=GenBank:WP_096533263.1;Name=WP_096533263.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=CYJ02_RS05200;product=transcription antitermination factor NusB;protein_id=WP_096533263.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 121537 121911 . - . ID=gene-CYJ02_RS05205;Name=CYJ02_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05205;old_locus_tag=CYJ02_05205 NZ_PJUQ01000007.1 Protein Homology CDS 121537 121911 . - 0 ID=cds-WP_014613838.1;Parent=gene-CYJ02_RS05205;Dbxref=GenBank:WP_014613838.1;Name=WP_014613838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=CYJ02_RS05205;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613838.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 121932 123287 . - . ID=gene-CYJ02_RS05210;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05210;old_locus_tag=CYJ02_05210 NZ_PJUQ01000007.1 Protein Homology CDS 121932 123287 . - 0 ID=cds-WP_096533264.1;Parent=gene-CYJ02_RS05210;Dbxref=GenBank:WP_096533264.1;Name=WP_096533264.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613837.1;locus_tag=CYJ02_RS05210;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_096533264.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 123289 123750 . - . ID=gene-CYJ02_RS05215;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05215;old_locus_tag=CYJ02_05215 NZ_PJUQ01000007.1 Protein Homology CDS 123289 123750 . - 0 ID=cds-WP_014613836.1;Parent=gene-CYJ02_RS05215;Dbxref=GenBank:WP_014613836.1;Name=WP_014613836.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165243.1;locus_tag=CYJ02_RS05215;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_014613836.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 124083 124640 . - . ID=gene-CYJ02_RS05220;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CYJ02_RS05220;old_locus_tag=CYJ02_05220 NZ_PJUQ01000007.1 Protein Homology CDS 124083 124640 . - 0 ID=cds-WP_014613835.1;Parent=gene-CYJ02_RS05220;Dbxref=GenBank:WP_014613835.1;Name=WP_014613835.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=CYJ02_RS05220;product=elongation factor P;protein_id=WP_014613835.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 124659 125729 . - . ID=gene-CYJ02_RS05225;Name=CYJ02_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05225;old_locus_tag=CYJ02_05225 NZ_PJUQ01000007.1 Protein Homology CDS 124659 125729 . - 0 ID=cds-WP_037542943.1;Parent=gene-CYJ02_RS05225;Dbxref=GenBank:WP_037542943.1;Name=WP_037542943.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613834.1;locus_tag=CYJ02_RS05225;product=M24 family metallopeptidase;protein_id=WP_037542943.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 125824 126423 . + . ID=gene-CYJ02_RS05230;Name=CYJ02_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05230;old_locus_tag=CYJ02_05230 NZ_PJUQ01000007.1 Protein Homology CDS 125824 126423 . + 0 ID=cds-WP_015729159.1;Parent=gene-CYJ02_RS05230;Dbxref=GenBank:WP_015729159.1;Name=WP_015729159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613833.1;locus_tag=CYJ02_RS05230;product=coiled-coil domain-containing 22 family protein;protein_id=WP_015729159.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 126444 126668 . + . ID=gene-CYJ02_RS05235;Name=CYJ02_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05235;old_locus_tag=CYJ02_05235 NZ_PJUQ01000007.1 Protein Homology CDS 126444 126668 . + 0 ID=cds-WP_014613832.1;Parent=gene-CYJ02_RS05235;Dbxref=GenBank:WP_014613832.1;Name=WP_014613832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613832.1;locus_tag=CYJ02_RS05235;product=SA1362 family protein;protein_id=WP_014613832.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 126784 127614 . - . ID=gene-CYJ02_RS05240;Name=CYJ02_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05240;old_locus_tag=CYJ02_05240 NZ_PJUQ01000007.1 Protein Homology CDS 126784 127614 . - 0 ID=cds-WP_014613831.1;Parent=gene-CYJ02_RS05240;Dbxref=GenBank:WP_014613831.1;Name=WP_014613831.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=CYJ02_RS05240;product=lipoate--protein ligase family protein;protein_id=WP_014613831.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 127774 128151 . + . ID=gene-CYJ02_RS05245;Name=CYJ02_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05245;old_locus_tag=CYJ02_05245 NZ_PJUQ01000007.1 Protein Homology CDS 127774 128151 . + 0 ID=cds-WP_370498505.1;Parent=gene-CYJ02_RS05245;Dbxref=GenBank:WP_370498505.1;Name=WP_370498505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449897.1;locus_tag=CYJ02_RS05245;product=rhodanese-like domain-containing protein;protein_id=WP_370498505.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 128507 129979 . - . ID=gene-CYJ02_RS05250;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05250;old_locus_tag=CYJ02_05250 NZ_PJUQ01000007.1 Protein Homology CDS 128507 129979 . - 0 ID=cds-WP_096538144.1;Parent=gene-CYJ02_RS05250;Dbxref=GenBank:WP_096538144.1;Name=WP_096538144.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500145.1;locus_tag=CYJ02_RS05250;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_096538144.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 129969 131318 . - . ID=gene-CYJ02_RS05255;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05255;old_locus_tag=CYJ02_05255 NZ_PJUQ01000007.1 Protein Homology CDS 129969 131318 . - 0 ID=cds-WP_101431444.1;Parent=gene-CYJ02_RS05255;Dbxref=GenBank:WP_101431444.1;Name=WP_101431444.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=CYJ02_RS05255;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_101431444.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 131331 132422 . - . ID=gene-CYJ02_RS05260;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CYJ02_RS05260;old_locus_tag=CYJ02_05260 NZ_PJUQ01000007.1 Protein Homology CDS 131331 132422 . - 0 ID=cds-WP_015729161.1;Parent=gene-CYJ02_RS05260;Dbxref=GenBank:WP_015729161.1;Name=WP_015729161.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636954.1;locus_tag=CYJ02_RS05260;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_015729161.1;transl_table=11 NZ_PJUQ01000007.1 cmsearch riboswitch 132498 132593 . - . ID=id-NZ_PJUQ01000007.1:132498..132593;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000007.1 RefSeq gene 132580 133107 . - . ID=gene-CYJ02_RS05265;Name=CYJ02_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05265;old_locus_tag=CYJ02_05265 NZ_PJUQ01000007.1 Protein Homology CDS 132580 133107 . - 0 ID=cds-WP_014613826.1;Parent=gene-CYJ02_RS05265;Dbxref=GenBank:WP_014613826.1;Name=WP_014613826.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613826.1;locus_tag=CYJ02_RS05265;product=shikimate kinase;protein_id=WP_014613826.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 133271 133756 . - . ID=gene-CYJ02_RS13025;Name=CYJ02_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13025;old_locus_tag=CYJ02_05275 NZ_PJUQ01000007.1 Protein Homology CDS 133271 133756 . - 0 ID=cds-WP_080552896.1;Parent=gene-CYJ02_RS13025;Dbxref=GenBank:WP_080552896.1;Name=WP_080552896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=CYJ02_RS13025;product=competence type IV pilus minor pilin ComGF;protein_id=WP_080552896.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 133662 133862 . - . ID=gene-CYJ02_RS05280;Name=CYJ02_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05280;old_locus_tag=CYJ02_05280 NZ_PJUQ01000007.1 Protein Homology CDS 133662 133862 . - 0 ID=cds-WP_020219623.1;Parent=gene-CYJ02_RS05280;Dbxref=GenBank:WP_020219623.1;Name=WP_020219623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219623.1;locus_tag=CYJ02_RS05280;product=hypothetical protein;protein_id=WP_020219623.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 133967 134407 . - . ID=gene-CYJ02_RS05285;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=CYJ02_RS05285;old_locus_tag=CYJ02_05285 NZ_PJUQ01000007.1 Protein Homology CDS 133967 134407 . - 0 ID=cds-WP_014613823.1;Parent=gene-CYJ02_RS05285;Dbxref=GenBank:WP_014613823.1;Name=WP_014613823.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729164.1;locus_tag=CYJ02_RS05285;product=competence type IV pilus minor pilin ComGD;protein_id=WP_014613823.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 134385 134708 . - . ID=gene-CYJ02_RS05290;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05290;old_locus_tag=CYJ02_05290 NZ_PJUQ01000007.1 Protein Homology CDS 134385 134708 . - 0 ID=cds-WP_015729165.1;Parent=gene-CYJ02_RS05290;Dbxref=GenBank:WP_015729165.1;Name=WP_015729165.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165232.1;locus_tag=CYJ02_RS05290;product=competence type IV pilus major pilin ComGC;protein_id=WP_015729165.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 134721 135788 . - . ID=gene-CYJ02_RS05295;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05295;old_locus_tag=CYJ02_05295 NZ_PJUQ01000007.1 Protein Homology CDS 134721 135788 . - 0 ID=cds-WP_037542939.1;Parent=gene-CYJ02_RS05295;Dbxref=GenBank:WP_037542939.1;Name=WP_037542939.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=CYJ02_RS05295;product=competence type IV pilus assembly protein ComGB;protein_id=WP_037542939.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 135757 136731 . - . ID=gene-CYJ02_RS05300;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05300;old_locus_tag=CYJ02_05300 NZ_PJUQ01000007.1 Protein Homology CDS 135757 136731 . - 0 ID=cds-WP_014613820.1;Parent=gene-CYJ02_RS05300;Dbxref=GenBank:WP_014613820.1;Name=WP_014613820.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165230.1;locus_tag=CYJ02_RS05300;product=competence type IV pilus ATPase ComGA;protein_id=WP_014613820.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 136892 137521 . - . ID=gene-CYJ02_RS05305;Name=CYJ02_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05305;old_locus_tag=CYJ02_05305 NZ_PJUQ01000007.1 Protein Homology CDS 136892 137521 . - 0 ID=cds-WP_037542865.1;Parent=gene-CYJ02_RS05305;Dbxref=GenBank:WP_037542865.1;Name=WP_037542865.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165229.1;locus_tag=CYJ02_RS05305;product=MBL fold metallo-hydrolase;protein_id=WP_037542865.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 137534 137845 . - . ID=gene-CYJ02_RS05310;Name=CYJ02_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05310;old_locus_tag=CYJ02_05310 NZ_PJUQ01000007.1 Protein Homology CDS 137534 137845 . - 0 ID=cds-WP_014613818.1;Parent=gene-CYJ02_RS05310;Dbxref=GenBank:WP_014613818.1;Name=WP_014613818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613818.1;locus_tag=CYJ02_RS05310;product=MTH1187 family thiamine-binding protein;protein_id=WP_014613818.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 137846 138835 . - . ID=gene-CYJ02_RS05315;Name=CYJ02_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05315;old_locus_tag=CYJ02_05315 NZ_PJUQ01000007.1 Protein Homology CDS 137846 138835 . - 0 ID=cds-WP_101431445.1;Parent=gene-CYJ02_RS05315;Dbxref=GenBank:WP_101431445.1;Name=WP_101431445.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_029377187.1;locus_tag=CYJ02_RS05315;product=ROK family glucokinase;protein_id=WP_101431445.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 138832 139035 . - . ID=gene-CYJ02_RS05320;Name=CYJ02_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05320;old_locus_tag=CYJ02_05320 NZ_PJUQ01000007.1 Protein Homology CDS 138832 139035 . - 0 ID=cds-WP_014613816.1;Parent=gene-CYJ02_RS05320;Dbxref=GenBank:WP_014613816.1;Name=WP_014613816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=CYJ02_RS05320;product=YqgQ family protein;protein_id=WP_014613816.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 139037 140476 . - . ID=gene-CYJ02_RS05325;Name=CYJ02_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05325;old_locus_tag=CYJ02_05325 NZ_PJUQ01000007.1 Protein Homology CDS 139037 140476 . - 0 ID=cds-WP_014613815.1;Parent=gene-CYJ02_RS05325;Dbxref=GenBank:WP_014613815.1;Name=WP_014613815.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=CYJ02_RS05325;product=rhomboid family intramembrane serine protease;protein_id=WP_014613815.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 140495 141034 . - . ID=gene-CYJ02_RS05330;Name=CYJ02_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05330;old_locus_tag=CYJ02_05330 NZ_PJUQ01000007.1 Protein Homology CDS 140495 141034 . - 0 ID=cds-WP_037542863.1;Parent=gene-CYJ02_RS05330;Dbxref=GenBank:WP_037542863.1;Name=WP_037542863.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613814.1;locus_tag=CYJ02_RS05330;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_037542863.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 141184 141348 . - . ID=gene-CYJ02_RS05335;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ02_RS05335;old_locus_tag=CYJ02_05335 NZ_PJUQ01000007.1 Protein Homology CDS 141184 141348 . - 0 ID=cds-WP_256726578.1;Parent=gene-CYJ02_RS05335;Dbxref=GenBank:WP_256726578.1;Name=WP_256726578.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ02_RS05335;product=50S ribosomal protein L33;protein_id=WP_256726578.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 141405 142055 . - . ID=gene-CYJ02_RS05340;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CYJ02_RS05340;old_locus_tag=CYJ02_05340 NZ_PJUQ01000007.1 Protein Homology CDS 141405 142055 . - 0 ID=cds-WP_014613812.1;Parent=gene-CYJ02_RS05340;Dbxref=GenBank:WP_014613812.1;Name=WP_014613812.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613812.1;locus_tag=CYJ02_RS05340;product=phosphate signaling complex protein PhoU;protein_id=WP_014613812.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 142057 142899 . - . ID=gene-CYJ02_RS05345;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05345;old_locus_tag=CYJ02_05345 NZ_PJUQ01000007.1 Protein Homology CDS 142057 142899 . - 0 ID=cds-WP_014613811.1;Parent=gene-CYJ02_RS05345;Dbxref=GenBank:WP_014613811.1;Name=WP_014613811.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613811.1;locus_tag=CYJ02_RS05345;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_014613811.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 142917 143798 . - . ID=gene-CYJ02_RS05350;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05350;old_locus_tag=CYJ02_05350 NZ_PJUQ01000007.1 Protein Homology CDS 142917 143798 . - 0 ID=cds-WP_014613810.1;Parent=gene-CYJ02_RS05350;Dbxref=GenBank:WP_014613810.1;Name=WP_014613810.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219627.1;locus_tag=CYJ02_RS05350;product=phosphate ABC transporter permease PstA;protein_id=WP_014613810.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 143798 144724 . - . ID=gene-CYJ02_RS05355;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05355;old_locus_tag=CYJ02_05355 NZ_PJUQ01000007.1 Protein Homology CDS 143798 144724 . - 0 ID=cds-WP_014613809.1;Parent=gene-CYJ02_RS05355;Dbxref=GenBank:WP_014613809.1;Name=WP_014613809.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204623.1;locus_tag=CYJ02_RS05355;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_014613809.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 144842 145801 . - . ID=gene-CYJ02_RS05360;Name=CYJ02_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05360;old_locus_tag=CYJ02_05360 NZ_PJUQ01000007.1 Protein Homology CDS 144842 145801 . - 0 ID=cds-WP_015729236.1;Parent=gene-CYJ02_RS05360;Dbxref=GenBank:WP_015729236.1;Name=WP_015729236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219629.1;locus_tag=CYJ02_RS05360;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_015729236.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 146070 148109 . - . ID=gene-CYJ02_RS05365;Name=CYJ02_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05365;old_locus_tag=CYJ02_05365 NZ_PJUQ01000007.1 Protein Homology CDS 146070 148109 . - 0 ID=cds-WP_063278771.1;Parent=gene-CYJ02_RS05365;Dbxref=GenBank:WP_063278771.1;Name=WP_063278771.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613807.1;locus_tag=CYJ02_RS05365;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_063278771.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 148402 149001 . - . ID=gene-CYJ02_RS05370;Name=CYJ02_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05370;old_locus_tag=CYJ02_05370 NZ_PJUQ01000007.1 Protein Homology CDS 148402 149001 . - 0 ID=cds-WP_014613806.1;Parent=gene-CYJ02_RS05370;Dbxref=GenBank:WP_014613806.1;Name=WP_014613806.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=CYJ02_RS05370;product=superoxide dismutase;protein_id=WP_014613806.1;transl_table=11 NZ_PJUQ01000007.1 RefSeq gene 149348 150454 . + . ID=gene-CYJ02_RS05375;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CYJ02_RS05375;old_locus_tag=CYJ02_05375 NZ_PJUQ01000007.1 Protein Homology CDS 149348 150454 . + 0 ID=cds-WP_014613804.1;Parent=gene-CYJ02_RS05375;Dbxref=GenBank:WP_014613804.1;Name=WP_014613804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219631.1;locus_tag=CYJ02_RS05375;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_014613804.1;transl_table=11 ##sequence-region NZ_PJUQ01000070.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000070.1 RefSeq region 1 499 . + . ID=NZ_PJUQ01000070.1:1..499;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000070.1 RefSeq gene 1 499 . + . ID=gene-CYJ02_RS12220;Name=CYJ02_RS12220;end_range=499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12220;old_locus_tag=CYJ02_12220;partial=true;start_range=.,1 NZ_PJUQ01000070.1 Protein Homology CDS 1 499 . + 0 ID=cds-WP_241901354.1;Parent=gene-CYJ02_RS12220;Dbxref=GenBank:WP_241901354.1;Name=WP_241901354.1;end_range=499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12220;partial=true;product=hypothetical protein;protein_id=WP_241901354.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000071.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000071.1 RefSeq region 1 333 . + . ID=NZ_PJUQ01000071.1:1..333;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000071.1 RefSeq pseudogene 1 333 . - . ID=gene-CYJ02_RS12225;Name=CYJ02_RS12225;end_range=333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12225;old_locus_tag=CYJ02_12225;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000071.1 Protein Homology CDS 1 333 . - 0 ID=cds-CYJ02_RS12225;Parent=gene-CYJ02_RS12225;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ02_RS12225;partial=true;product=fibronectin-binding surface protein SpsL;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000072.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000072.1 RefSeq region 1 428 . + . ID=NZ_PJUQ01000072.1:1..428;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000072.1 RefSeq gene 90 163 . + . ID=gene-CYJ02_RS12230;Name=CYJ02_RS12230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS12230;old_locus_tag=CYJ02_12230 NZ_PJUQ01000072.1 tRNAscan-SE tRNA 90 163 . + . ID=rna-CYJ02_RS12230;Parent=gene-CYJ02_RS12230;anticodon=(pos:124..126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12230;product=tRNA-Arg NZ_PJUQ01000072.1 tRNAscan-SE exon 90 163 . + . ID=exon-CYJ02_RS12230-1;Parent=rna-CYJ02_RS12230;anticodon=(pos:124..126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12230;product=tRNA-Arg NZ_PJUQ01000072.1 RefSeq gene 177 250 . + . ID=gene-CYJ02_RS12235;Name=CYJ02_RS12235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS12235;old_locus_tag=CYJ02_12235 NZ_PJUQ01000072.1 tRNAscan-SE tRNA 177 250 . + . ID=rna-CYJ02_RS12235;Parent=gene-CYJ02_RS12235;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12235;product=tRNA-Pro NZ_PJUQ01000072.1 tRNAscan-SE exon 177 250 . + . ID=exon-CYJ02_RS12235-1;Parent=rna-CYJ02_RS12235;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12235;product=tRNA-Pro NZ_PJUQ01000072.1 RefSeq gene 273 348 . + . ID=gene-CYJ02_RS12240;Name=CYJ02_RS12240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS12240;old_locus_tag=CYJ02_12240 NZ_PJUQ01000072.1 tRNAscan-SE tRNA 273 348 . + . ID=rna-CYJ02_RS12240;Parent=gene-CYJ02_RS12240;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12240;product=tRNA-Ala NZ_PJUQ01000072.1 tRNAscan-SE exon 273 348 . + . ID=exon-CYJ02_RS12240-1;Parent=rna-CYJ02_RS12240;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12240;product=tRNA-Ala ##sequence-region NZ_PJUQ01000073.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000073.1 RefSeq region 1 287 . + . ID=NZ_PJUQ01000073.1:1..287;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000073.1 RefSeq pseudogene 1 287 . - . ID=gene-CYJ02_RS12460;Name=CYJ02_RS12460;end_range=287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12460;old_locus_tag=CYJ02_12245;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000073.1 GeneMarkS-2+ CDS 1 287 . - 1 ID=cds-CYJ02_RS12460;Parent=gene-CYJ02_RS12460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=287,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ02_RS12460;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000074.1 1 446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000074.1 RefSeq region 1 446 . + . ID=NZ_PJUQ01000074.1:1..446;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000074.1 RefSeq gene 152 266 . + . ID=gene-CYJ02_RS12255;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ02_RS12255;old_locus_tag=CYJ02_12255 NZ_PJUQ01000074.1 cmsearch rRNA 152 266 . + . ID=rna-CYJ02_RS12255;Parent=gene-CYJ02_RS12255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12255;product=5S ribosomal RNA NZ_PJUQ01000074.1 cmsearch exon 152 266 . + . ID=exon-CYJ02_RS12255-1;Parent=rna-CYJ02_RS12255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12255;product=5S ribosomal RNA ##sequence-region NZ_PJUQ01000075.1 1 368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000075.1 RefSeq region 1 368 . + . ID=NZ_PJUQ01000075.1:1..368;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000075.1 RefSeq gene 1 368 . - . ID=gene-CYJ02_RS12260;Name=CYJ02_RS12260;end_range=368,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12260;old_locus_tag=CYJ02_12260;partial=true;start_range=.,1 NZ_PJUQ01000075.1 Protein Homology CDS 1 368 . - 2 ID=cds-WP_241901356.1;Parent=gene-CYJ02_RS12260;Dbxref=GenBank:WP_241901356.1;Name=WP_241901356.1;end_range=368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12260;partial=true;product=hypothetical protein;protein_id=WP_241901356.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000076.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000076.1 RefSeq region 1 387 . + . ID=NZ_PJUQ01000076.1:1..387;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000076.1 RefSeq gene 1 387 . - . ID=gene-CYJ02_RS12265;Name=CYJ02_RS12265;end_range=387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12265;old_locus_tag=CYJ02_12265;partial=true;start_range=.,1 NZ_PJUQ01000076.1 Protein Homology CDS 1 387 . - 0 ID=cds-WP_241901360.1;Parent=gene-CYJ02_RS12265;Dbxref=GenBank:WP_241901360.1;Name=WP_241901360.1;end_range=387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12265;partial=true;product=hypothetical protein;protein_id=WP_241901360.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000077.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000077.1 RefSeq region 1 229 . + . ID=NZ_PJUQ01000077.1:1..229;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N ##sequence-region NZ_PJUQ01000008.1 1 89787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000008.1 RefSeq region 1 89787 . + . ID=NZ_PJUQ01000008.1:1..89787;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000008.1 RefSeq gene 173 1724 . - . ID=gene-CYJ02_RS05380;Name=CYJ02_RS05380;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS05380;old_locus_tag=CYJ02_05380 NZ_PJUQ01000008.1 cmsearch rRNA 173 1724 . - . ID=rna-CYJ02_RS05380;Parent=gene-CYJ02_RS05380;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS05380;product=16S ribosomal RNA NZ_PJUQ01000008.1 cmsearch exon 173 1724 . - . ID=exon-CYJ02_RS05380-1;Parent=rna-CYJ02_RS05380;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS05380;product=16S ribosomal RNA NZ_PJUQ01000008.1 RefSeq gene 2456 2914 . - . ID=gene-CYJ02_RS05385;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=CYJ02_RS05385;old_locus_tag=CYJ02_05385 NZ_PJUQ01000008.1 Protein Homology CDS 2456 2914 . - 0 ID=cds-WP_014613510.1;Parent=gene-CYJ02_RS05385;Dbxref=GenBank:WP_014613510.1;Name=WP_014613510.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613510.1;locus_tag=CYJ02_RS05385;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_014613510.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 2995 3945 . - . ID=gene-CYJ02_RS05390;Name=CYJ02_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05390;old_locus_tag=CYJ02_05390 NZ_PJUQ01000008.1 Protein Homology CDS 2995 3945 . - 0 ID=cds-WP_101431447.1;Parent=gene-CYJ02_RS05390;Dbxref=GenBank:WP_101431447.1;Name=WP_101431447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=CYJ02_RS05390;product=phosphoglycerate dehydrogenase;protein_id=WP_101431447.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 3952 4410 . - . ID=gene-CYJ02_RS05395;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CYJ02_RS05395;old_locus_tag=CYJ02_05395 NZ_PJUQ01000008.1 Protein Homology CDS 3952 4410 . - 0 ID=cds-WP_014613508.1;Parent=gene-CYJ02_RS05395;Dbxref=GenBank:WP_014613508.1;Name=WP_014613508.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=CYJ02_RS05395;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_014613508.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 4493 5779 . + . ID=gene-CYJ02_RS05400;Name=CYJ02_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05400;old_locus_tag=CYJ02_05400 NZ_PJUQ01000008.1 Protein Homology CDS 4493 5779 . + 0 ID=cds-WP_101431448.1;Parent=gene-CYJ02_RS05400;Dbxref=GenBank:WP_101431448.1;Name=WP_101431448.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169387.1;locus_tag=CYJ02_RS05400;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_101431448.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 5873 6967 . + . ID=gene-CYJ02_RS05405;Name=CYJ02_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05405;old_locus_tag=CYJ02_05405 NZ_PJUQ01000008.1 Protein Homology CDS 5873 6967 . + 0 ID=cds-WP_014613506.1;Parent=gene-CYJ02_RS05405;Dbxref=GenBank:WP_014613506.1;Name=WP_014613506.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=CYJ02_RS05405;product=FUSC family protein;protein_id=WP_014613506.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 7115 8692 . - . ID=gene-CYJ02_RS05410;Name=CYJ02_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05410;old_locus_tag=CYJ02_05410 NZ_PJUQ01000008.1 Protein Homology CDS 7115 8692 . - 0 ID=cds-WP_014613505.1;Parent=gene-CYJ02_RS05410;Dbxref=GenBank:WP_014613505.1;Name=WP_014613505.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613505.1;locus_tag=CYJ02_RS05410;product=FMN-binding glutamate synthase family protein;protein_id=WP_014613505.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 9217 10953 . - . ID=gene-CYJ02_RS05415;Name=CYJ02_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05415;old_locus_tag=CYJ02_05415 NZ_PJUQ01000008.1 Protein Homology CDS 9217 10953 . - 0 ID=cds-WP_101431449.1;Parent=gene-CYJ02_RS05415;Dbxref=GenBank:WP_101431449.1;Name=WP_101431449.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=CYJ02_RS05415;product=ABC transporter ATP-binding protein;protein_id=WP_101431449.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 11689 13542 . - . ID=gene-CYJ02_RS05420;Name=CYJ02_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05420;old_locus_tag=CYJ02_05420 NZ_PJUQ01000008.1 Protein Homology CDS 11689 13542 . - 0 ID=cds-WP_101431450.1;Parent=gene-CYJ02_RS05420;Dbxref=GenBank:WP_101431450.1;Name=WP_101431450.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728656.1;locus_tag=CYJ02_RS05420;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_101431450.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 13559 14206 . - . ID=gene-CYJ02_RS05425;Name=CYJ02_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05425;old_locus_tag=CYJ02_05425 NZ_PJUQ01000008.1 Protein Homology CDS 13559 14206 . - 0 ID=cds-WP_020220353.1;Parent=gene-CYJ02_RS05425;Dbxref=GenBank:WP_020220353.1;Name=WP_020220353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=CYJ02_RS05425;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_020220353.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 14333 14896 . + . ID=gene-CYJ02_RS05430;Name=CYJ02_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05430;old_locus_tag=CYJ02_05430 NZ_PJUQ01000008.1 Protein Homology CDS 14333 14896 . + 0 ID=cds-WP_014614699.1;Parent=gene-CYJ02_RS05430;Dbxref=GenBank:WP_014614699.1;Name=WP_014614699.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614699.1;locus_tag=CYJ02_RS05430;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014614699.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 15000 16169 . + . ID=gene-CYJ02_RS05435;Name=CYJ02_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05435;old_locus_tag=CYJ02_05435 NZ_PJUQ01000008.1 Protein Homology CDS 15000 16169 . + 0 ID=cds-WP_101431451.1;Parent=gene-CYJ02_RS05435;Dbxref=GenBank:WP_101431451.1;Name=WP_101431451.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166302.1;locus_tag=CYJ02_RS05435;product=DUF418 domain-containing protein;protein_id=WP_101431451.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 16403 16966 . - . ID=gene-CYJ02_RS05440;Name=CYJ02_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05440;old_locus_tag=CYJ02_05440 NZ_PJUQ01000008.1 Protein Homology CDS 16403 16966 . - 0 ID=cds-WP_015728653.1;Parent=gene-CYJ02_RS05440;Dbxref=GenBank:WP_015728653.1;Name=WP_015728653.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728653.1;locus_tag=CYJ02_RS05440;product=GNAT family N-acetyltransferase;protein_id=WP_015728653.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 17198 18649 . + . ID=gene-CYJ02_RS05445;Name=CYJ02_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05445;old_locus_tag=CYJ02_05445 NZ_PJUQ01000008.1 Protein Homology CDS 17198 18649 . + 0 ID=cds-WP_014614701.1;Parent=gene-CYJ02_RS05445;Dbxref=GenBank:WP_014614701.1;Name=WP_014614701.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166304.1;locus_tag=CYJ02_RS05445;product=APC family permease;protein_id=WP_014614701.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 18902 19036 . - . ID=gene-CYJ02_RS13030;Name=CYJ02_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS13030;old_locus_tag=CYJ02_05450 NZ_PJUQ01000008.1 Protein Homology CDS 18902 19036 . - 0 ID=cds-WP_082245604.1;Parent=gene-CYJ02_RS13030;Dbxref=GenBank:WP_082245604.1;Name=WP_082245604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=CYJ02_RS13030;product=SH3 domain-containing protein;protein_id=WP_082245604.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 19395 20573 . - . ID=gene-CYJ02_RS05455;Name=CYJ02_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05455;old_locus_tag=CYJ02_05455 NZ_PJUQ01000008.1 Protein Homology CDS 19395 20573 . - 0 ID=cds-WP_015728651.1;Parent=gene-CYJ02_RS05455;Dbxref=GenBank:WP_015728651.1;Name=WP_015728651.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ02_RS05455;product=MFS transporter;protein_id=WP_015728651.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 20563 21609 . - . ID=gene-CYJ02_RS05460;Name=CYJ02_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05460;old_locus_tag=CYJ02_05460 NZ_PJUQ01000008.1 Protein Homology CDS 20563 21609 . - 0 ID=cds-WP_015728650.1;Parent=gene-CYJ02_RS05460;Dbxref=GenBank:WP_015728650.1;Name=WP_015728650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012273.7;locus_tag=CYJ02_RS05460;product=glutathione S-transferase family protein;protein_id=WP_015728650.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 21623 22933 . - . ID=gene-CYJ02_RS05465;Name=CYJ02_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05465;old_locus_tag=CYJ02_05465 NZ_PJUQ01000008.1 Protein Homology CDS 21623 22933 . - 0 ID=cds-WP_015728649.1;Parent=gene-CYJ02_RS05465;Dbxref=GenBank:WP_015728649.1;Name=WP_015728649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728649.1;locus_tag=CYJ02_RS05465;product=radical SAM/SPASM domain-containing protein;protein_id=WP_015728649.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 23615 23977 . - . ID=gene-CYJ02_RS05470;Name=CYJ02_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05470;old_locus_tag=CYJ02_05470 NZ_PJUQ01000008.1 Protein Homology CDS 23615 23977 . - 0 ID=cds-WP_014614702.1;Parent=gene-CYJ02_RS05470;Dbxref=GenBank:WP_014614702.1;Name=WP_014614702.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=CYJ02_RS05470;product=DUF423 domain-containing protein;protein_id=WP_014614702.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 24005 24328 . - . ID=gene-CYJ02_RS05475;Name=CYJ02_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05475;old_locus_tag=CYJ02_05475 NZ_PJUQ01000008.1 Protein Homology CDS 24005 24328 . - 0 ID=cds-WP_070407643.1;Parent=gene-CYJ02_RS05475;Dbxref=GenBank:WP_070407643.1;Name=WP_070407643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=CYJ02_RS05475;product=DUF5327 family protein;protein_id=WP_070407643.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 24321 24998 . - . ID=gene-CYJ02_RS05480;Name=CYJ02_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05480;old_locus_tag=CYJ02_05480 NZ_PJUQ01000008.1 Protein Homology CDS 24321 24998 . - 0 ID=cds-WP_284730715.1;Parent=gene-CYJ02_RS05480;Dbxref=GenBank:WP_284730715.1;Name=WP_284730715.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=CYJ02_RS05480;product=uracil-DNA glycosylase;protein_id=WP_284730715.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 25179 26009 . + . ID=gene-CYJ02_RS05485;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ02_RS05485;old_locus_tag=CYJ02_05485 NZ_PJUQ01000008.1 Protein Homology CDS 25179 26009 . + 0 ID=cds-WP_014614705.1;Parent=gene-CYJ02_RS05485;Dbxref=GenBank:WP_014614705.1;Name=WP_014614705.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CYJ02_RS05485;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014614705.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 26154 26411 . - . ID=gene-CYJ02_RS05490;Name=CYJ02_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05490;old_locus_tag=CYJ02_05490 NZ_PJUQ01000008.1 Protein Homology CDS 26154 26411 . - 0 ID=cds-WP_020219918.1;Parent=gene-CYJ02_RS05490;Dbxref=GenBank:WP_020219918.1;Name=WP_020219918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219918.1;locus_tag=CYJ02_RS05490;product=hypothetical protein;protein_id=WP_020219918.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 26411 26782 . - . ID=gene-CYJ02_RS05495;Name=CYJ02_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05495;old_locus_tag=CYJ02_05495 NZ_PJUQ01000008.1 Protein Homology CDS 26411 26782 . - 0 ID=cds-WP_015728646.1;Parent=gene-CYJ02_RS05495;Dbxref=GenBank:WP_015728646.1;Name=WP_015728646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614707.1;locus_tag=CYJ02_RS05495;product=hypothetical protein;protein_id=WP_015728646.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 26751 27896 . - . ID=gene-CYJ02_RS05500;Name=CYJ02_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05500;old_locus_tag=CYJ02_05500 NZ_PJUQ01000008.1 Protein Homology CDS 26751 27896 . - 0 ID=cds-WP_014614708.1;Parent=gene-CYJ02_RS05500;Dbxref=GenBank:WP_014614708.1;Name=WP_014614708.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614708.1;locus_tag=CYJ02_RS05500;product=thiolase family protein;protein_id=WP_014614708.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 27893 29242 . - . ID=gene-CYJ02_RS05505;Name=CYJ02_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05505;old_locus_tag=CYJ02_05505 NZ_PJUQ01000008.1 Protein Homology CDS 27893 29242 . - 0 ID=cds-WP_101431452.1;Parent=gene-CYJ02_RS05505;Dbxref=GenBank:WP_101431452.1;Name=WP_101431452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728644.1;locus_tag=CYJ02_RS05505;product=AMP-binding protein;protein_id=WP_101431452.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 29453 30139 . - . ID=gene-CYJ02_RS05510;Name=CYJ02_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05510;old_locus_tag=CYJ02_05510 NZ_PJUQ01000008.1 Protein Homology CDS 29453 30139 . - 0 ID=cds-WP_015728643.1;Parent=gene-CYJ02_RS05510;Dbxref=GenBank:WP_015728643.1;Name=WP_015728643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=CYJ02_RS05510;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_015728643.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 30356 31213 . - . ID=gene-CYJ02_RS05515;Name=CYJ02_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05515;old_locus_tag=CYJ02_05515 NZ_PJUQ01000008.1 Protein Homology CDS 30356 31213 . - 0 ID=cds-WP_101431453.1;Parent=gene-CYJ02_RS05515;Dbxref=GenBank:WP_101431453.1;Name=WP_101431453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ02_RS05515;product=oxidoreductase;protein_id=WP_101431453.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 31701 32384 . - . ID=gene-CYJ02_RS05520;Name=CYJ02_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05520;old_locus_tag=CYJ02_05520 NZ_PJUQ01000008.1 Protein Homology CDS 31701 32384 . - 0 ID=cds-WP_101431454.1;Parent=gene-CYJ02_RS05520;Dbxref=GenBank:WP_101431454.1;Name=WP_101431454.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219923.1;locus_tag=CYJ02_RS05520;product=flavin reductase family protein;protein_id=WP_101431454.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 32949 33497 . - . ID=gene-CYJ02_RS05525;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05525;old_locus_tag=CYJ02_05525 NZ_PJUQ01000008.1 Protein Homology CDS 32949 33497 . - 0 ID=cds-WP_101431455.1;Parent=gene-CYJ02_RS05525;Dbxref=GenBank:WP_101431455.1;Name=WP_101431455.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169036.1;locus_tag=CYJ02_RS05525;product=6-phospho-3-hexuloisomerase;protein_id=WP_101431455.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 33499 34137 . - . ID=gene-CYJ02_RS05530;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05530;old_locus_tag=CYJ02_05530 NZ_PJUQ01000008.1 Protein Homology CDS 33499 34137 . - 0 ID=cds-WP_101431456.1;Parent=gene-CYJ02_RS05530;Dbxref=GenBank:WP_101431456.1;Name=WP_101431456.1;Ontology_term=GO:0005975,GO:0019647,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation via ribulose monophosphate cycle|0019647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CYJ02_RS05530;product=3-hexulose-6-phosphate synthase;protein_id=WP_101431456.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 34236 34970 . - . ID=gene-CYJ02_RS05535;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05535;old_locus_tag=CYJ02_05535 NZ_PJUQ01000008.1 Protein Homology CDS 34236 34970 . - 0 ID=cds-WP_063284854.1;Parent=gene-CYJ02_RS05535;Dbxref=GenBank:WP_063284854.1;Name=WP_063284854.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614723.1;locus_tag=CYJ02_RS05535;product=glucosamine-6-phosphate deaminase;protein_id=WP_063284854.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 34976 35650 . - . ID=gene-CYJ02_RS05540;Name=CYJ02_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05540;old_locus_tag=CYJ02_05540 NZ_PJUQ01000008.1 Protein Homology CDS 34976 35650 . - 0 ID=cds-WP_014614724.1;Parent=gene-CYJ02_RS05540;Dbxref=GenBank:WP_014614724.1;Name=WP_014614724.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728633.1;locus_tag=CYJ02_RS05540;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_014614724.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 35651 37189 . - . ID=gene-CYJ02_RS05545;Name=CYJ02_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05545;old_locus_tag=CYJ02_05545 NZ_PJUQ01000008.1 Protein Homology CDS 35651 37189 . - 0 ID=cds-WP_101431457.1;Parent=gene-CYJ02_RS05545;Dbxref=GenBank:WP_101431457.1;Name=WP_101431457.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166666.1;locus_tag=CYJ02_RS05545;product=PTS transporter subunit EIIC;protein_id=WP_101431457.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 37309 38148 . + . ID=gene-CYJ02_RS05550;Name=CYJ02_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05550;old_locus_tag=CYJ02_05550 NZ_PJUQ01000008.1 Protein Homology CDS 37309 38148 . + 0 ID=cds-WP_070407650.1;Parent=gene-CYJ02_RS05550;Dbxref=GenBank:WP_070407650.1;Name=WP_070407650.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728631.1;locus_tag=CYJ02_RS05550;product=MurR/RpiR family transcriptional regulator;protein_id=WP_070407650.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 38234 38593 . + . ID=gene-CYJ02_RS05555;Name=CYJ02_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05555;old_locus_tag=CYJ02_05555 NZ_PJUQ01000008.1 Protein Homology CDS 38234 38593 . + 0 ID=cds-WP_014614727.1;Parent=gene-CYJ02_RS05555;Dbxref=GenBank:WP_014614727.1;Name=WP_014614727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166668.1;locus_tag=CYJ02_RS05555;product=YojF family protein;protein_id=WP_014614727.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 38612 39289 . + . ID=gene-CYJ02_RS05560;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CYJ02_RS05560;old_locus_tag=CYJ02_05560 NZ_PJUQ01000008.1 Protein Homology CDS 38612 39289 . + 0 ID=cds-WP_041613367.1;Parent=gene-CYJ02_RS05560;Dbxref=GenBank:WP_041613367.1;Name=WP_041613367.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169043.1;locus_tag=CYJ02_RS05560;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_041613367.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 39335 40213 . + . ID=gene-CYJ02_RS05565;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=CYJ02_RS05565;old_locus_tag=CYJ02_05565 NZ_PJUQ01000008.1 Protein Homology CDS 39335 40213 . + 0 ID=cds-WP_015728629.1;Parent=gene-CYJ02_RS05565;Dbxref=GenBank:WP_015728629.1;Name=WP_015728629.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CYJ02_RS05565;product=GTP cyclohydrolase FolE2;protein_id=WP_015728629.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 40645 41253 . + . ID=gene-CYJ02_RS05570;Name=CYJ02_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05570;old_locus_tag=CYJ02_05570 NZ_PJUQ01000008.1 Protein Homology CDS 40645 41253 . + 0 ID=cds-WP_063278640.1;Parent=gene-CYJ02_RS05570;Dbxref=GenBank:WP_063278640.1;Name=WP_063278640.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: protein motif:HMM:NF012514.7;locus_tag=CYJ02_RS05570;product=NUDIX hydrolase;protein_id=WP_063278640.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq pseudogene 41445 42499 . - . ID=gene-CYJ02_RS13035;Name=CYJ02_RS13035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13035;pseudo=true NZ_PJUQ01000008.1 Protein Homology CDS 41445 42499 . - 0 ID=cds-CYJ02_RS13035;Parent=gene-CYJ02_RS13035;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_336253575.1;locus_tag=CYJ02_RS13035;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 42667 43548 . - . ID=gene-CYJ02_RS05585;Name=CYJ02_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05585;old_locus_tag=CYJ02_05585 NZ_PJUQ01000008.1 Protein Homology CDS 42667 43548 . - 0 ID=cds-WP_037542368.1;Parent=gene-CYJ02_RS05585;Dbxref=GenBank:WP_037542368.1;Name=WP_037542368.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167145.1;locus_tag=CYJ02_RS05585;product=LysR family transcriptional regulator;protein_id=WP_037542368.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 43748 45052 . + . ID=gene-CYJ02_RS05590;Name=CYJ02_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05590;old_locus_tag=CYJ02_05590 NZ_PJUQ01000008.1 Protein Homology CDS 43748 45052 . + 0 ID=cds-WP_014613130.1;Parent=gene-CYJ02_RS05590;Dbxref=GenBank:WP_014613130.1;Name=WP_014613130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=CYJ02_RS05590;product=YjiH family protein;protein_id=WP_014613130.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 45074 46738 . + . ID=gene-CYJ02_RS05595;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CYJ02_RS05595;old_locus_tag=CYJ02_05595 NZ_PJUQ01000008.1 Protein Homology CDS 45074 46738 . + 0 ID=cds-WP_161193175.1;Parent=gene-CYJ02_RS05595;Dbxref=GenBank:WP_161193175.1;Name=WP_161193175.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613131.1;locus_tag=CYJ02_RS05595;product=urocanate hydratase;protein_id=WP_161193175.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 46735 47976 . + . ID=gene-CYJ02_RS05600;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CYJ02_RS05600;old_locus_tag=CYJ02_05600 NZ_PJUQ01000008.1 Protein Homology CDS 46735 47976 . + 0 ID=cds-WP_101431459.1;Parent=gene-CYJ02_RS05600;Dbxref=GenBank:WP_101431459.1;Name=WP_101431459.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729560.1;locus_tag=CYJ02_RS05600;product=imidazolonepropionase;protein_id=WP_101431459.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 48511 49701 . + . ID=gene-CYJ02_RS05605;Name=CYJ02_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05605;old_locus_tag=CYJ02_05605 NZ_PJUQ01000008.1 Protein Homology CDS 48511 49701 . + 0 ID=cds-WP_233275675.1;Parent=gene-CYJ02_RS05605;Dbxref=GenBank:WP_233275675.1;Name=WP_233275675.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167149.1;locus_tag=CYJ02_RS05605;product=SulP family inorganic anion transporter;protein_id=WP_233275675.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 49691 50827 . + . ID=gene-CYJ02_RS05610;Name=CYJ02_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05610;old_locus_tag=CYJ02_05610 NZ_PJUQ01000008.1 Protein Homology CDS 49691 50827 . + 0 ID=cds-WP_101431460.1;Parent=gene-CYJ02_RS05610;Dbxref=GenBank:WP_101431460.1;Name=WP_101431460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613134.1;locus_tag=CYJ02_RS05610;product=M20 peptidase aminoacylase family protein;protein_id=WP_101431460.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 50990 52291 . + . ID=gene-CYJ02_RS05615;Name=CYJ02_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05615;old_locus_tag=CYJ02_05615 NZ_PJUQ01000008.1 Protein Homology CDS 50990 52291 . + 0 ID=cds-WP_015729558.1;Parent=gene-CYJ02_RS05615;Dbxref=GenBank:WP_015729558.1;Name=WP_015729558.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613135.1;locus_tag=CYJ02_RS05615;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_015729558.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 52396 52905 . + . ID=gene-CYJ02_RS05620;Name=CYJ02_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05620;old_locus_tag=CYJ02_05620 NZ_PJUQ01000008.1 Protein Homology CDS 52396 52905 . + 0 ID=cds-WP_020219778.1;Parent=gene-CYJ02_RS05620;Dbxref=GenBank:WP_020219778.1;Name=WP_020219778.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219778.1;locus_tag=CYJ02_RS05620;product=SRPBCC family protein;protein_id=WP_020219778.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 53021 53548 . - . ID=gene-CYJ02_RS05625;Name=CYJ02_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05625;old_locus_tag=CYJ02_05625 NZ_PJUQ01000008.1 Protein Homology CDS 53021 53548 . - 0 ID=cds-WP_015729557.1;Parent=gene-CYJ02_RS05625;Dbxref=GenBank:WP_015729557.1;Name=WP_015729557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167153.1;locus_tag=CYJ02_RS05625;product=hypothetical protein;protein_id=WP_015729557.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 53738 54658 . + . ID=gene-CYJ02_RS05630;Name=CYJ02_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05630;old_locus_tag=CYJ02_05630 NZ_PJUQ01000008.1 Protein Homology CDS 53738 54658 . + 0 ID=cds-WP_015729556.1;Parent=gene-CYJ02_RS05630;Dbxref=GenBank:WP_015729556.1;Name=WP_015729556.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169620.1;locus_tag=CYJ02_RS05630;product=bile acid:sodium symporter family protein;protein_id=WP_015729556.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 54837 55115 . + . ID=gene-CYJ02_RS05635;Name=CYJ02_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05635;old_locus_tag=CYJ02_05635 NZ_PJUQ01000008.1 Protein Homology CDS 54837 55115 . + 0 ID=cds-WP_014613139.1;Parent=gene-CYJ02_RS05635;Dbxref=GenBank:WP_014613139.1;Name=WP_014613139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=CYJ02_RS05635;product=hypothetical protein;protein_id=WP_014613139.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 55195 56025 . + . ID=gene-CYJ02_RS05640;Name=CYJ02_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05640;old_locus_tag=CYJ02_05640 NZ_PJUQ01000008.1 Protein Homology CDS 55195 56025 . + 0 ID=cds-WP_015729555.1;Parent=gene-CYJ02_RS05640;Dbxref=GenBank:WP_015729555.1;Name=WP_015729555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=CYJ02_RS05640;product=VOC family protein;protein_id=WP_015729555.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 56071 56715 . + . ID=gene-CYJ02_RS05645;Name=CYJ02_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05645;old_locus_tag=CYJ02_05645 NZ_PJUQ01000008.1 Protein Homology CDS 56071 56715 . + 0 ID=cds-WP_014613141.1;Parent=gene-CYJ02_RS05645;Dbxref=GenBank:WP_014613141.1;Name=WP_014613141.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=CYJ02_RS05645;product=HAD family hydrolase;protein_id=WP_014613141.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 56712 56903 . + . ID=gene-CYJ02_RS05650;Name=CYJ02_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05650;old_locus_tag=CYJ02_05650 NZ_PJUQ01000008.1 Protein Homology CDS 56712 56903 . + 0 ID=cds-WP_014613142.1;Parent=gene-CYJ02_RS05650;Dbxref=GenBank:WP_014613142.1;Name=WP_014613142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=CYJ02_RS05650;product=hypothetical protein;protein_id=WP_014613142.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 57118 57300 . - . ID=gene-CYJ02_RS05655;Name=CYJ02_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05655;old_locus_tag=CYJ02_05655 NZ_PJUQ01000008.1 Protein Homology CDS 57118 57300 . - 0 ID=cds-WP_014613143.1;Parent=gene-CYJ02_RS05655;Dbxref=GenBank:WP_014613143.1;Name=WP_014613143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=CYJ02_RS05655;product=hypothetical protein;protein_id=WP_014613143.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 57307 57642 . - . ID=gene-CYJ02_RS05660;Name=CYJ02_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05660;old_locus_tag=CYJ02_05660 NZ_PJUQ01000008.1 Protein Homology CDS 57307 57642 . - 0 ID=cds-WP_015729553.1;Parent=gene-CYJ02_RS05660;Dbxref=GenBank:WP_015729553.1;Name=WP_015729553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613144.1;locus_tag=CYJ02_RS05660;product=hypothetical protein;protein_id=WP_015729553.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 57730 58572 . - . ID=gene-CYJ02_RS05665;Name=CYJ02_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05665;old_locus_tag=CYJ02_05665 NZ_PJUQ01000008.1 Protein Homology CDS 57730 58572 . - 0 ID=cds-WP_037542374.1;Parent=gene-CYJ02_RS05665;Dbxref=GenBank:WP_037542374.1;Name=WP_037542374.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=CYJ02_RS05665;product=formate/nitrite transporter family protein;protein_id=WP_037542374.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 58939 60327 . + . ID=gene-CYJ02_RS05670;Name=CYJ02_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05670;old_locus_tag=CYJ02_05670 NZ_PJUQ01000008.1 Protein Homology CDS 58939 60327 . + 0 ID=cds-WP_014613146.1;Parent=gene-CYJ02_RS05670;Dbxref=GenBank:WP_014613146.1;Name=WP_014613146.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=CYJ02_RS05670;product=amino acid permease;protein_id=WP_014613146.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 60442 60876 . - . ID=gene-CYJ02_RS05675;Name=CYJ02_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05675;old_locus_tag=CYJ02_05675 NZ_PJUQ01000008.1 Protein Homology CDS 60442 60876 . - 0 ID=cds-WP_241901312.1;Parent=gene-CYJ02_RS05675;Dbxref=GenBank:WP_241901312.1;Name=WP_241901312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169629.1;locus_tag=CYJ02_RS05675;product=hypothetical protein;protein_id=WP_241901312.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 61020 61751 . + . ID=gene-CYJ02_RS05680;Name=CYJ02_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05680;old_locus_tag=CYJ02_05680 NZ_PJUQ01000008.1 Protein Homology CDS 61020 61751 . + 0 ID=cds-WP_014613148.1;Parent=gene-CYJ02_RS05680;Dbxref=GenBank:WP_014613148.1;Name=WP_014613148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613148.1;locus_tag=CYJ02_RS05680;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_014613148.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 61805 62506 . - . ID=gene-CYJ02_RS05685;Name=CYJ02_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05685;old_locus_tag=CYJ02_05685 NZ_PJUQ01000008.1 Protein Homology CDS 61805 62506 . - 0 ID=cds-WP_014613149.1;Parent=gene-CYJ02_RS05685;Dbxref=GenBank:WP_014613149.1;Name=WP_014613149.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=CYJ02_RS05685;product=helix-turn-helix transcriptional regulator;protein_id=WP_014613149.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 62959 63753 . + . ID=gene-CYJ02_RS05690;Name=CYJ02_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05690;old_locus_tag=CYJ02_05690 NZ_PJUQ01000008.1 Protein Homology CDS 62959 63753 . + 0 ID=cds-WP_065520375.1;Parent=gene-CYJ02_RS05690;Dbxref=GenBank:WP_065520375.1;Name=WP_065520375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613150.1;locus_tag=CYJ02_RS05690;product=inositol monophosphatase family protein;protein_id=WP_065520375.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 63881 64834 . + . ID=gene-CYJ02_RS05695;Name=CYJ02_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05695;old_locus_tag=CYJ02_05695 NZ_PJUQ01000008.1 Protein Homology CDS 63881 64834 . + 0 ID=cds-WP_014613151.1;Parent=gene-CYJ02_RS05695;Dbxref=GenBank:WP_014613151.1;Name=WP_014613151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613151.1;locus_tag=CYJ02_RS05695;product=LCP family glycopolymer transferase;protein_id=WP_014613151.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 65064 65771 . + . ID=gene-CYJ02_RS05700;Name=CYJ02_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05700;old_locus_tag=CYJ02_05700 NZ_PJUQ01000008.1 Protein Homology CDS 65064 65771 . + 0 ID=cds-WP_014613152.1;Parent=gene-CYJ02_RS05700;Dbxref=GenBank:WP_014613152.1;Name=WP_014613152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729548.1;locus_tag=CYJ02_RS05700;product=DUF969 domain-containing protein;protein_id=WP_014613152.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 65752 66678 . + . ID=gene-CYJ02_RS05705;Name=CYJ02_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05705;old_locus_tag=CYJ02_05705 NZ_PJUQ01000008.1 Protein Homology CDS 65752 66678 . + 0 ID=cds-WP_037542383.1;Parent=gene-CYJ02_RS05705;Dbxref=GenBank:WP_037542383.1;Name=WP_037542383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167169.1;locus_tag=CYJ02_RS05705;product=DUF979 domain-containing protein;protein_id=WP_037542383.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 66703 67344 . + . ID=gene-CYJ02_RS05710;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CYJ02_RS05710;old_locus_tag=CYJ02_05710 NZ_PJUQ01000008.1 Protein Homology CDS 66703 67344 . + 0 ID=cds-WP_014613153.1;Parent=gene-CYJ02_RS05710;Dbxref=GenBank:WP_014613153.1;Name=WP_014613153.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=CYJ02_RS05710;product=pyroglutamyl-peptidase I;protein_id=WP_014613153.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 67541 70477 . + . ID=gene-CYJ02_RS05715;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CYJ02_RS05715;old_locus_tag=CYJ02_05715 NZ_PJUQ01000008.1 Protein Homology CDS 67541 70477 . + 0 ID=cds-WP_014613154.1;Parent=gene-CYJ02_RS05715;Dbxref=GenBank:WP_014613154.1;Name=WP_014613154.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=CYJ02_RS05715;product=formate dehydrogenase subunit alpha;protein_id=WP_014613154.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 70477 70944 . + . ID=gene-CYJ02_RS05720;Name=CYJ02_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05720;old_locus_tag=CYJ02_05720 NZ_PJUQ01000008.1 Protein Homology CDS 70477 70944 . + 0 ID=cds-WP_014613155.1;Parent=gene-CYJ02_RS05720;Dbxref=GenBank:WP_014613155.1;Name=WP_014613155.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729545.1;locus_tag=CYJ02_RS05720;product=helical membrane plugin domain-containing protein;protein_id=WP_014613155.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 71699 71941 . + . ID=gene-CYJ02_RS05725;Name=CYJ02_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05725;old_locus_tag=CYJ02_05725 NZ_PJUQ01000008.1 Protein Homology CDS 71699 71941 . + 0 ID=cds-WP_014613156.1;Parent=gene-CYJ02_RS05725;Dbxref=GenBank:WP_014613156.1;Name=WP_014613156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=CYJ02_RS05725;product=hypothetical protein;protein_id=WP_014613156.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 71969 72748 . + . ID=gene-CYJ02_RS05730;Name=CYJ02_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05730;old_locus_tag=CYJ02_05730 NZ_PJUQ01000008.1 Protein Homology CDS 71969 72748 . + 0 ID=cds-WP_015729543.1;Parent=gene-CYJ02_RS05730;Dbxref=GenBank:WP_015729543.1;Name=WP_015729543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729543.1;locus_tag=CYJ02_RS05730;product=N-acetylglucosaminidase;protein_id=WP_015729543.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 72768 73895 . + . ID=gene-CYJ02_RS05735;Name=CYJ02_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05735;old_locus_tag=CYJ02_05735 NZ_PJUQ01000008.1 Protein Homology CDS 72768 73895 . + 0 ID=cds-WP_020219773.1;Parent=gene-CYJ02_RS05735;Dbxref=GenBank:WP_020219773.1;Name=WP_020219773.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=CYJ02_RS05735;product=FAD-dependent monooxygenase;protein_id=WP_020219773.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 74095 75057 . - . ID=gene-CYJ02_RS05740;Name=CYJ02_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05740;old_locus_tag=CYJ02_05740 NZ_PJUQ01000008.1 Protein Homology CDS 74095 75057 . - 0 ID=cds-WP_014613159.1;Parent=gene-CYJ02_RS05740;Dbxref=GenBank:WP_014613159.1;Name=WP_014613159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613159.1;locus_tag=CYJ02_RS05740;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_014613159.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 75121 75435 . - . ID=gene-CYJ02_RS05745;Name=CYJ02_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05745;old_locus_tag=CYJ02_05745 NZ_PJUQ01000008.1 Protein Homology CDS 75121 75435 . - 0 ID=cds-WP_101431461.1;Parent=gene-CYJ02_RS05745;Dbxref=GenBank:WP_101431461.1;Name=WP_101431461.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219772.1;locus_tag=CYJ02_RS05745;product=DMT family transporter;protein_id=WP_101431461.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 75432 75758 . - . ID=gene-CYJ02_RS05750;Name=CYJ02_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05750;old_locus_tag=CYJ02_05750 NZ_PJUQ01000008.1 Protein Homology CDS 75432 75758 . - 0 ID=cds-WP_014613161.1;Parent=gene-CYJ02_RS05750;Dbxref=GenBank:WP_014613161.1;Name=WP_014613161.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613161.1;locus_tag=CYJ02_RS05750;product=DMT family transporter;protein_id=WP_014613161.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 76069 76647 . - . ID=gene-CYJ02_RS05755;Name=CYJ02_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05755;old_locus_tag=CYJ02_05755 NZ_PJUQ01000008.1 Protein Homology CDS 76069 76647 . - 0 ID=cds-WP_014613162.1;Parent=gene-CYJ02_RS05755;Dbxref=GenBank:WP_014613162.1;Name=WP_014613162.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=CYJ02_RS05755;product=CHAP domain-containing protein;protein_id=WP_014613162.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 77318 78394 . + . ID=gene-CYJ02_RS05760;Name=CYJ02_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05760;old_locus_tag=CYJ02_05760 NZ_PJUQ01000008.1 Protein Homology CDS 77318 78394 . + 0 ID=cds-WP_014613163.1;Parent=gene-CYJ02_RS05760;Dbxref=GenBank:WP_014613163.1;Name=WP_014613163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=CYJ02_RS05760;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_014613163.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 78420 79817 . + . ID=gene-CYJ02_RS05765;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05765;old_locus_tag=CYJ02_05765 NZ_PJUQ01000008.1 Protein Homology CDS 78420 79817 . + 0 ID=cds-WP_100007016.1;Parent=gene-CYJ02_RS05765;Dbxref=GenBank:WP_100007016.1;Name=WP_100007016.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613164.1;locus_tag=CYJ02_RS05765;product=Na+/H+ antiporter NhaC;protein_id=WP_100007016.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 80089 80565 . + . ID=gene-CYJ02_RS05770;Name=CYJ02_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05770;old_locus_tag=CYJ02_05770 NZ_PJUQ01000008.1 Protein Homology CDS 80089 80565 . + 0 ID=cds-WP_014613165.1;Parent=gene-CYJ02_RS05770;Dbxref=GenBank:WP_014613165.1;Name=WP_014613165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=CYJ02_RS05770;product=hypothetical protein;protein_id=WP_014613165.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 80729 81457 . - . ID=gene-CYJ02_RS05775;Name=CYJ02_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05775;old_locus_tag=CYJ02_05775 NZ_PJUQ01000008.1 Protein Homology CDS 80729 81457 . - 0 ID=cds-WP_063278970.1;Parent=gene-CYJ02_RS05775;Dbxref=GenBank:WP_063278970.1;Name=WP_063278970.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=CYJ02_RS05775;product=CHAP domain-containing protein;protein_id=WP_063278970.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 82162 83214 . + . ID=gene-CYJ02_RS05780;Name=CYJ02_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05780;old_locus_tag=CYJ02_05780 NZ_PJUQ01000008.1 Protein Homology CDS 82162 83214 . + 0 ID=cds-WP_014613167.1;Parent=gene-CYJ02_RS05780;Dbxref=GenBank:WP_014613167.1;Name=WP_014613167.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=CYJ02_RS05780;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613167.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 83228 83581 . + . ID=gene-CYJ02_RS05785;Name=CYJ02_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05785;old_locus_tag=CYJ02_05785 NZ_PJUQ01000008.1 Protein Homology CDS 83228 83581 . + 0 ID=cds-WP_014613168.1;Parent=gene-CYJ02_RS05785;Dbxref=GenBank:WP_014613168.1;Name=WP_014613168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=CYJ02_RS05785;product=DoxX family protein;protein_id=WP_014613168.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 84044 84391 . + . ID=gene-CYJ02_RS05790;Name=CYJ02_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05790;old_locus_tag=CYJ02_05790 NZ_PJUQ01000008.1 Protein Homology CDS 84044 84391 . + 0 ID=cds-WP_014613169.1;Parent=gene-CYJ02_RS05790;Dbxref=GenBank:WP_014613169.1;Name=WP_014613169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=CYJ02_RS05790;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613169.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 84829 85989 . + . ID=gene-CYJ02_RS05795;Name=CYJ02_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05795;old_locus_tag=CYJ02_05795 NZ_PJUQ01000008.1 Protein Homology CDS 84829 85989 . + 0 ID=cds-WP_015729536.1;Parent=gene-CYJ02_RS05795;Dbxref=GenBank:WP_015729536.1;Name=WP_015729536.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166578.1;locus_tag=CYJ02_RS05795;product=acyl-CoA dehydrogenase family protein;protein_id=WP_015729536.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 86113 86490 . + . ID=gene-CYJ02_RS05800;Name=CYJ02_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05800;old_locus_tag=CYJ02_05800 NZ_PJUQ01000008.1 Protein Homology CDS 86113 86490 . + 0 ID=cds-WP_014613172.1;Parent=gene-CYJ02_RS05800;Dbxref=GenBank:WP_014613172.1;Name=WP_014613172.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=CYJ02_RS05800;product=YbaN family protein;protein_id=WP_014613172.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 86760 87683 . + . ID=gene-CYJ02_RS05805;Name=CYJ02_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05805;old_locus_tag=CYJ02_05805 NZ_PJUQ01000008.1 Protein Homology CDS 86760 87683 . + 0 ID=cds-WP_101431462.1;Parent=gene-CYJ02_RS05805;Dbxref=GenBank:WP_101431462.1;Name=WP_101431462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729535.1;locus_tag=CYJ02_RS05805;product=ABC transporter substrate-binding protein;protein_id=WP_101431462.1;transl_table=11 NZ_PJUQ01000008.1 RefSeq gene 88135 89661 . - . ID=gene-CYJ02_RS05810;Name=CYJ02_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05810;old_locus_tag=CYJ02_05810 NZ_PJUQ01000008.1 Protein Homology CDS 88135 89661 . - 0 ID=cds-WP_101431463.1;Parent=gene-CYJ02_RS05810;Dbxref=GenBank:WP_101431463.1;Name=WP_101431463.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220283.1;locus_tag=CYJ02_RS05810;product=sodium:solute symporter family protein;protein_id=WP_101431463.1;transl_table=11 ##sequence-region NZ_PJUQ01000078.1 1 228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000078.1 RefSeq region 1 228 . + . ID=NZ_PJUQ01000078.1:1..228;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000078.1 RefSeq pseudogene 19 228 . + . ID=gene-CYJ02_RS12880;Name=CYJ02_RS12880;end_range=228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12880;old_locus_tag=CYJ02_12270;partial=true;pseudo=true;start_range=.,19 NZ_PJUQ01000078.1 Protein Homology CDS 19 228 . + 0 ID=cds-CYJ02_RS12880;Parent=gene-CYJ02_RS12880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ02_RS12880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,19;transl_table=11 ##sequence-region NZ_PJUQ01000079.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000079.1 RefSeq region 1 318 . + . ID=NZ_PJUQ01000079.1:1..318;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000079.1 RefSeq gene 1 96 . - . ID=gene-CYJ02_RS12605;Name=CYJ02_RS12605;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS12605;partial=true;start_range=.,1 NZ_PJUQ01000079.1 cmsearch rRNA 1 96 . - . ID=rna-CYJ02_RS12605;Parent=gene-CYJ02_RS12605;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12605;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000079.1 cmsearch exon 1 96 . - . ID=exon-CYJ02_RS12605-1;Parent=rna-CYJ02_RS12605;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12605;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PJUQ01000080.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000080.1 RefSeq region 1 251 . + . ID=NZ_PJUQ01000080.1:1..251;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000080.1 RefSeq gene 94 170 . + . ID=gene-CYJ02_RS12275;Name=CYJ02_RS12275;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ02_RS12275;old_locus_tag=CYJ02_12275 NZ_PJUQ01000080.1 tRNAscan-SE tRNA 94 170 . + . ID=rna-CYJ02_RS12275;Parent=gene-CYJ02_RS12275;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12275;product=tRNA-Ile NZ_PJUQ01000080.1 tRNAscan-SE exon 94 170 . + . ID=exon-CYJ02_RS12275-1;Parent=rna-CYJ02_RS12275;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ02_RS12275;product=tRNA-Ile ##sequence-region NZ_PJUQ01000081.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000081.1 RefSeq region 1 250 . + . ID=NZ_PJUQ01000081.1:1..250;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N ##sequence-region NZ_PJUQ01000082.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000082.1 RefSeq region 1 232 . + . ID=NZ_PJUQ01000082.1:1..232;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000082.1 RefSeq gene 1 232 . - . ID=gene-CYJ02_RS12280;Name=CYJ02_RS12280;end_range=232,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ02_RS12280;old_locus_tag=CYJ02_12280;partial=true;start_range=.,1 NZ_PJUQ01000082.1 cmsearch rRNA 1 232 . - . ID=rna-CYJ02_RS12280;Parent=gene-CYJ02_RS12280;Dbxref=RFAM:RF02541;end_range=232,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12280;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PJUQ01000082.1 cmsearch exon 1 232 . - . ID=exon-CYJ02_RS12280-1;Parent=rna-CYJ02_RS12280;Dbxref=RFAM:RF02541;end_range=232,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ02_RS12280;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PJUQ01000009.1 1 104062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000009.1 RefSeq region 1 104062 . + . ID=NZ_PJUQ01000009.1:1..104062;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000009.1 RefSeq gene 1 375 . - . ID=gene-CYJ02_RS05815;Name=CYJ02_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05815;old_locus_tag=CYJ02_05815;partial=true;start_range=.,1 NZ_PJUQ01000009.1 Protein Homology CDS 1 375 . - 0 ID=cds-WP_101431464.1;Parent=gene-CYJ02_RS05815;Dbxref=GenBank:WP_101431464.1;Name=WP_101431464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729353.1;locus_tag=CYJ02_RS05815;partial=true;product=capsid assembly scaffolding protein Gp46 family protein;protein_id=WP_101431464.1;start_range=.,1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 568 1311 . - . ID=gene-CYJ02_RS05820;Name=CYJ02_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05820;old_locus_tag=CYJ02_05820 NZ_PJUQ01000009.1 Protein Homology CDS 568 1311 . - 0 ID=cds-WP_015729316.1;Parent=gene-CYJ02_RS05820;Dbxref=GenBank:WP_015729316.1;Name=WP_015729316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015598.7;locus_tag=CYJ02_RS05820;product=MAP domain-containing protein;protein_id=WP_015729316.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 1648 1851 . - . ID=gene-CYJ02_RS12725;Name=CYJ02_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12725;old_locus_tag=CYJ02_05825 NZ_PJUQ01000009.1 Protein Homology CDS 1648 1851 . - 0 ID=cds-WP_065354722.1;Parent=gene-CYJ02_RS12725;Dbxref=GenBank:WP_065354722.1;Name=WP_065354722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613647.1;locus_tag=CYJ02_RS12725;product=hypothetical protein;protein_id=WP_065354722.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 2064 2258 . + . ID=gene-CYJ02_RS12900;Name=CYJ02_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS12900 NZ_PJUQ01000009.1 Protein Homology CDS 2064 2258 . + 0 ID=cds-WP_110178849.1;Parent=gene-CYJ02_RS12900;Dbxref=GenBank:WP_110178849.1;Name=WP_110178849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04450.1;locus_tag=CYJ02_RS12900;product=putative immunity/bacteriocin fusion bifunctional protein;protein_id=WP_110178849.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 2685 3638 . + . ID=gene-CYJ02_RS05835;Name=CYJ02_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05835;old_locus_tag=CYJ02_05835 NZ_PJUQ01000009.1 Protein Homology CDS 2685 3638 . + 0 ID=cds-WP_015729318.1;Parent=gene-CYJ02_RS05835;Dbxref=GenBank:WP_015729318.1;Name=WP_015729318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219643.1;locus_tag=CYJ02_RS05835;product=ornithine cyclodeaminase family protein;protein_id=WP_015729318.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 3688 4434 . - . ID=gene-CYJ02_RS05840;Name=CYJ02_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05840;old_locus_tag=CYJ02_05840 NZ_PJUQ01000009.1 Protein Homology CDS 3688 4434 . - 0 ID=cds-WP_015729319.1;Parent=gene-CYJ02_RS05840;Dbxref=GenBank:WP_015729319.1;Name=WP_015729319.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613645.1;locus_tag=CYJ02_RS05840;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015729319.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 4509 4967 . + . ID=gene-CYJ02_RS05845;Name=CYJ02_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05845;old_locus_tag=CYJ02_05845 NZ_PJUQ01000009.1 Protein Homology CDS 4509 4967 . + 0 ID=cds-WP_015729320.1;Parent=gene-CYJ02_RS05845;Dbxref=GenBank:WP_015729320.1;Name=WP_015729320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=CYJ02_RS05845;product=SACOL1771 family peroxiredoxin;protein_id=WP_015729320.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 5128 6288 . + . ID=gene-CYJ02_RS05850;Name=CYJ02_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05850;old_locus_tag=CYJ02_05850 NZ_PJUQ01000009.1 Protein Homology CDS 5128 6288 . + 0 ID=cds-WP_101431465.1;Parent=gene-CYJ02_RS05850;Dbxref=GenBank:WP_101431465.1;Name=WP_101431465.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=CYJ02_RS05850;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_101431465.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 6278 7873 . + . ID=gene-CYJ02_RS05855;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05855;old_locus_tag=CYJ02_05855 NZ_PJUQ01000009.1 Protein Homology CDS 6278 7873 . + 0 ID=cds-WP_014613642.1;Parent=gene-CYJ02_RS05855;Dbxref=GenBank:WP_014613642.1;Name=WP_014613642.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165053.1;locus_tag=CYJ02_RS05855;product=phosphoglycerate dehydrogenase;protein_id=WP_014613642.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 7925 9049 . - . ID=gene-CYJ02_RS05860;Name=CYJ02_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05860;old_locus_tag=CYJ02_05860 NZ_PJUQ01000009.1 Protein Homology CDS 7925 9049 . - 0 ID=cds-WP_101431466.1;Parent=gene-CYJ02_RS05860;Dbxref=GenBank:WP_101431466.1;Name=WP_101431466.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=CYJ02_RS05860;product=HAD family hydrolase;protein_id=WP_101431466.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 9257 9874 . - . ID=gene-CYJ02_RS05865;Name=CYJ02_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05865;old_locus_tag=CYJ02_05865 NZ_PJUQ01000009.1 Protein Homology CDS 9257 9874 . - 0 ID=cds-WP_014613640.1;Parent=gene-CYJ02_RS05865;Dbxref=GenBank:WP_014613640.1;Name=WP_014613640.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165051.1;locus_tag=CYJ02_RS05865;product=lysophospholipid acyltransferase family protein;protein_id=WP_014613640.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 10029 11300 . + . ID=gene-CYJ02_RS05870;Name=CYJ02_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05870;old_locus_tag=CYJ02_05870 NZ_PJUQ01000009.1 Protein Homology CDS 10029 11300 . + 0 ID=cds-WP_101431467.1;Parent=gene-CYJ02_RS05870;Dbxref=GenBank:WP_101431467.1;Name=WP_101431467.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219646.1;locus_tag=CYJ02_RS05870;product=S1C family serine protease;protein_id=WP_101431467.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 11354 12616 . - . ID=gene-CYJ02_RS05875;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CYJ02_RS05875;old_locus_tag=CYJ02_05875 NZ_PJUQ01000009.1 Protein Homology CDS 11354 12616 . - 0 ID=cds-WP_020219647.1;Parent=gene-CYJ02_RS05875;Dbxref=GenBank:WP_020219647.1;Name=WP_020219647.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=CYJ02_RS05875;product=tyrosine--tRNA ligase;protein_id=WP_020219647.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 12962 13861 . + . ID=gene-CYJ02_RS05880;Name=CYJ02_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05880;old_locus_tag=CYJ02_05880 NZ_PJUQ01000009.1 Protein Homology CDS 12962 13861 . + 0 ID=cds-WP_015729323.1;Parent=gene-CYJ02_RS05880;Dbxref=GenBank:WP_015729323.1;Name=WP_015729323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729323.1;locus_tag=CYJ02_RS05880;product=biosynthetic peptidoglycan transglycosylase;protein_id=WP_015729323.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 13936 15603 . - . ID=gene-CYJ02_RS05885;Name=CYJ02_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05885;old_locus_tag=CYJ02_05885 NZ_PJUQ01000009.1 Protein Homology CDS 13936 15603 . - 0 ID=cds-WP_101431468.1;Parent=gene-CYJ02_RS05885;Dbxref=GenBank:WP_101431468.1;Name=WP_101431468.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CYJ02_RS05885;product=formate--tetrahydrofolate ligase;protein_id=WP_101431468.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 15919 17628 . - . ID=gene-CYJ02_RS05890;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05890;old_locus_tag=CYJ02_05890 NZ_PJUQ01000009.1 Protein Homology CDS 15919 17628 . - 0 ID=cds-WP_014613635.1;Parent=gene-CYJ02_RS05890;Dbxref=GenBank:WP_014613635.1;Name=WP_014613635.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=CYJ02_RS05890;product=acetate--CoA ligase;protein_id=WP_014613635.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 17795 18427 . + . ID=gene-CYJ02_RS05895;Name=CYJ02_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05895;old_locus_tag=CYJ02_05895 NZ_PJUQ01000009.1 Protein Homology CDS 17795 18427 . + 0 ID=cds-WP_101431469.1;Parent=gene-CYJ02_RS05895;Dbxref=GenBank:WP_101431469.1;Name=WP_101431469.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=CYJ02_RS05895;product=GNAT family N-acetyltransferase;protein_id=WP_101431469.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 18441 19598 . + . ID=gene-CYJ02_RS05900;Name=CYJ02_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05900;old_locus_tag=CYJ02_05900 NZ_PJUQ01000009.1 Protein Homology CDS 18441 19598 . + 0 ID=cds-WP_014613633.1;Parent=gene-CYJ02_RS05900;Dbxref=GenBank:WP_014613633.1;Name=WP_014613633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165044.1;locus_tag=CYJ02_RS05900;product=acetoin utilization protein AcuC;protein_id=WP_014613633.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 19717 20706 . - . ID=gene-CYJ02_RS05905;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CYJ02_RS05905;old_locus_tag=CYJ02_05905 NZ_PJUQ01000009.1 Protein Homology CDS 19717 20706 . - 0 ID=cds-WP_014613632.1;Parent=gene-CYJ02_RS05905;Dbxref=GenBank:WP_014613632.1;Name=WP_014613632.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503626.1;locus_tag=CYJ02_RS05905;product=catabolite control protein A;protein_id=WP_014613632.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 21114 22205 . - . ID=gene-CYJ02_RS05910;Name=CYJ02_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05910;old_locus_tag=CYJ02_05910 NZ_PJUQ01000009.1 Protein Homology CDS 21114 22205 . - 0 ID=cds-WP_014613631.1;Parent=gene-CYJ02_RS05910;Dbxref=GenBank:WP_014613631.1;Name=WP_014613631.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=CYJ02_RS05910;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_014613631.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 22525 23622 . - . ID=gene-CYJ02_RS05915;Name=CYJ02_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05915;old_locus_tag=CYJ02_05915 NZ_PJUQ01000009.1 Protein Homology CDS 22525 23622 . - 0 ID=cds-WP_100040088.1;Parent=gene-CYJ02_RS05915;Dbxref=GenBank:WP_100040088.1;Name=WP_100040088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729328.1;locus_tag=CYJ02_RS05915;product=hypothetical protein;protein_id=WP_100040088.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 23718 24326 . - . ID=gene-CYJ02_RS05920;Name=CYJ02_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05920;old_locus_tag=CYJ02_05920 NZ_PJUQ01000009.1 Protein Homology CDS 23718 24326 . - 0 ID=cds-WP_014613629.1;Parent=gene-CYJ02_RS05920;Dbxref=GenBank:WP_014613629.1;Name=WP_014613629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434851.1;locus_tag=CYJ02_RS05920;product=DUF948 domain-containing protein;protein_id=WP_014613629.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 24405 25718 . - . ID=gene-CYJ02_RS05925;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CYJ02_RS05925;old_locus_tag=CYJ02_05925 NZ_PJUQ01000009.1 Protein Homology CDS 24405 25718 . - 0 ID=cds-WP_014613628.1;Parent=gene-CYJ02_RS05925;Dbxref=GenBank:WP_014613628.1;Name=WP_014613628.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484970.1;locus_tag=CYJ02_RS05925;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014613628.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 25747 28965 . - . ID=gene-CYJ02_RS05930;Name=CYJ02_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05930;old_locus_tag=CYJ02_05930 NZ_PJUQ01000009.1 Protein Homology CDS 25747 28965 . - 0 ID=cds-WP_101431470.1;Parent=gene-CYJ02_RS05930;Dbxref=GenBank:WP_101431470.1;Name=WP_101431470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=CYJ02_RS05930;product=DNA translocase FtsK;protein_id=WP_101431470.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 28985 29584 . - . ID=gene-CYJ02_RS05935;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=CYJ02_RS05935;old_locus_tag=CYJ02_05935 NZ_PJUQ01000009.1 Protein Homology CDS 28985 29584 . - 0 ID=cds-WP_014613626.1;Parent=gene-CYJ02_RS05935;Dbxref=GenBank:WP_014613626.1;Name=WP_014613626.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=CYJ02_RS05935;product=YtpR family tRNA-binding protein;protein_id=WP_014613626.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 29590 30456 . - . ID=gene-CYJ02_RS05940;Name=CYJ02_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05940;old_locus_tag=CYJ02_05940 NZ_PJUQ01000009.1 Protein Homology CDS 29590 30456 . - 0 ID=cds-WP_014613625.1;Parent=gene-CYJ02_RS05940;Dbxref=GenBank:WP_014613625.1;Name=WP_014613625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=CYJ02_RS05940;product=DUF1444 domain-containing protein;protein_id=WP_014613625.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 30549 30857 . - . ID=gene-CYJ02_RS05945;Name=CYJ02_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05945;old_locus_tag=CYJ02_05945 NZ_PJUQ01000009.1 Protein Homology CDS 30549 30857 . - 0 ID=cds-WP_014613624.1;Parent=gene-CYJ02_RS05945;Dbxref=GenBank:WP_014613624.1;Name=WP_014613624.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168411.1;locus_tag=CYJ02_RS05945;product=thioredoxin family protein;protein_id=WP_014613624.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 30869 31936 . - . ID=gene-CYJ02_RS05950;Name=CYJ02_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05950;old_locus_tag=CYJ02_05950 NZ_PJUQ01000009.1 Protein Homology CDS 30869 31936 . - 0 ID=cds-WP_101431471.1;Parent=gene-CYJ02_RS05950;Dbxref=GenBank:WP_101431471.1;Name=WP_101431471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613623.1;locus_tag=CYJ02_RS05950;product=M42 family metallopeptidase;protein_id=WP_101431471.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 32032 32349 . + . ID=gene-CYJ02_RS05955;Name=CYJ02_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05955;old_locus_tag=CYJ02_05955 NZ_PJUQ01000009.1 Protein Homology CDS 32032 32349 . + 0 ID=cds-WP_014613622.1;Parent=gene-CYJ02_RS05955;Dbxref=GenBank:WP_014613622.1;Name=WP_014613622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=CYJ02_RS05955;product=hypothetical protein;protein_id=WP_014613622.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 32416 33249 . - . ID=gene-CYJ02_RS05960;Name=CYJ02_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05960;old_locus_tag=CYJ02_05960 NZ_PJUQ01000009.1 Protein Homology CDS 32416 33249 . - 0 ID=cds-WP_101431472.1;Parent=gene-CYJ02_RS05960;Dbxref=GenBank:WP_101431472.1;Name=WP_101431472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613621.1;locus_tag=CYJ02_RS05960;product=YtnP family quorum-quenching lactonase;protein_id=WP_101431472.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 33521 34174 . - . ID=gene-CYJ02_RS05965;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CYJ02_RS05965;old_locus_tag=CYJ02_05965 NZ_PJUQ01000009.1 Protein Homology CDS 33521 34174 . - 0 ID=cds-WP_015729335.1;Parent=gene-CYJ02_RS05965;Dbxref=GenBank:WP_015729335.1;Name=WP_015729335.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729335.1;locus_tag=CYJ02_RS05965;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_015729335.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 34190 34981 . - . ID=gene-CYJ02_RS05970;Name=CYJ02_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05970;old_locus_tag=CYJ02_05970 NZ_PJUQ01000009.1 Protein Homology CDS 34190 34981 . - 0 ID=cds-WP_014613619.1;Parent=gene-CYJ02_RS05970;Dbxref=GenBank:WP_014613619.1;Name=WP_014613619.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=CYJ02_RS05970;product=phosphotransferase family protein;protein_id=WP_014613619.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 35213 36061 . - . ID=gene-CYJ02_RS05975;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CYJ02_RS05975;old_locus_tag=CYJ02_05975 NZ_PJUQ01000009.1 Protein Homology CDS 35213 36061 . - 0 ID=cds-WP_014613618.1;Parent=gene-CYJ02_RS05975;Dbxref=GenBank:WP_014613618.1;Name=WP_014613618.1;Ontology_term=GO:0042853,GO:0046416,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine-2-oxoglutarate aminotransferase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA,D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613618.1;locus_tag=CYJ02_RS05975;product=D-amino-acid transaminase;protein_id=WP_014613618.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 36065 37474 . - . ID=gene-CYJ02_RS05980;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=CYJ02_RS05980;old_locus_tag=CYJ02_05980 NZ_PJUQ01000009.1 Protein Homology CDS 36065 37474 . - 0 ID=cds-WP_014613617.1;Parent=gene-CYJ02_RS05980;Dbxref=GenBank:WP_014613617.1;Name=WP_014613617.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=CYJ02_RS05980;product=dipeptidase PepV;protein_id=WP_014613617.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 37797 38195 . - . ID=gene-CYJ02_RS05985;Name=CYJ02_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05985;old_locus_tag=CYJ02_05985 NZ_PJUQ01000009.1 Protein Homology CDS 37797 38195 . - 0 ID=cds-WP_014613615.1;Parent=gene-CYJ02_RS05985;Dbxref=GenBank:WP_014613615.1;Name=WP_014613615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168403.1;locus_tag=CYJ02_RS05985;product=YtxH domain-containing protein;protein_id=WP_014613615.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 38279 38977 . - . ID=gene-CYJ02_RS05990;Name=CYJ02_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05990;old_locus_tag=CYJ02_05990 NZ_PJUQ01000009.1 Protein Homology CDS 38279 38977 . - 0 ID=cds-WP_014613614.1;Parent=gene-CYJ02_RS05990;Dbxref=GenBank:WP_014613614.1;Name=WP_014613614.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165027.1;locus_tag=CYJ02_RS05990;product=pseudouridine synthase;protein_id=WP_014613614.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 38977 40611 . - . ID=gene-CYJ02_RS05995;Name=CYJ02_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS05995;old_locus_tag=CYJ02_05995 NZ_PJUQ01000009.1 Protein Homology CDS 38977 40611 . - 0 ID=cds-WP_063278941.1;Parent=gene-CYJ02_RS05995;Dbxref=GenBank:WP_063278941.1;Name=WP_063278941.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168401.1;locus_tag=CYJ02_RS05995;product=putative polysaccharide biosynthesis protein;protein_id=WP_063278941.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 40728 41984 . + . ID=gene-CYJ02_RS06000;Name=CYJ02_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06000;old_locus_tag=CYJ02_06000 NZ_PJUQ01000009.1 Protein Homology CDS 40728 41984 . + 0 ID=cds-WP_101431473.1;Parent=gene-CYJ02_RS06000;Dbxref=GenBank:WP_101431473.1;Name=WP_101431473.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613612.1;locus_tag=CYJ02_RS06000;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101431473.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 42615 42926 . - . ID=gene-CYJ02_RS06005;Name=CYJ02_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06005;old_locus_tag=CYJ02_06005 NZ_PJUQ01000009.1 Protein Homology CDS 42615 42926 . - 0 ID=cds-WP_015729339.1;Parent=gene-CYJ02_RS06005;Dbxref=GenBank:WP_015729339.1;Name=WP_015729339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187674.1;locus_tag=CYJ02_RS06005;product=rhodanese-like domain-containing protein;protein_id=WP_015729339.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 42953 45367 . - . ID=gene-CYJ02_RS06010;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CYJ02_RS06010;old_locus_tag=CYJ02_06010 NZ_PJUQ01000009.1 Protein Homology CDS 42953 45367 . - 0 ID=cds-WP_096533595.1;Parent=gene-CYJ02_RS06010;Dbxref=GenBank:WP_096533595.1;Name=WP_096533595.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=CYJ02_RS06010;product=leucine--tRNA ligase;protein_id=WP_096533595.1;transl_table=11 NZ_PJUQ01000009.1 cmsearch binding_site 45415 45606 . - . ID=id-NZ_PJUQ01000009.1:45415..45606;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PJUQ01000009.1 RefSeq gene 45676 46857 . - . ID=gene-CYJ02_RS06015;Name=CYJ02_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06015;old_locus_tag=CYJ02_06015 NZ_PJUQ01000009.1 Protein Homology CDS 45676 46857 . - 0 ID=cds-WP_015729341.1;Parent=gene-CYJ02_RS06015;Dbxref=GenBank:WP_015729341.1;Name=WP_015729341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729341.1;locus_tag=CYJ02_RS06015;product=MDR family MFS transporter;protein_id=WP_015729341.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 47005 47958 . + . ID=gene-CYJ02_RS06020;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CYJ02_RS06020;old_locus_tag=CYJ02_06020 NZ_PJUQ01000009.1 Protein Homology CDS 47005 47958 . + 0 ID=cds-WP_101431474.1;Parent=gene-CYJ02_RS06020;Dbxref=GenBank:WP_101431474.1;Name=WP_101431474.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613608.1;locus_tag=CYJ02_RS06020;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_101431474.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 47955 48518 . + . ID=gene-CYJ02_RS06025;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=CYJ02_RS06025;old_locus_tag=CYJ02_06025 NZ_PJUQ01000009.1 Protein Homology CDS 47955 48518 . + 0 ID=cds-WP_014613607.1;Parent=gene-CYJ02_RS06025;Dbxref=GenBank:WP_014613607.1;Name=WP_014613607.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=CYJ02_RS06025;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_014613607.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 49021 49431 . - . ID=gene-CYJ02_RS06030;Name=CYJ02_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06030;old_locus_tag=CYJ02_06030 NZ_PJUQ01000009.1 Protein Homology CDS 49021 49431 . - 0 ID=cds-WP_014613606.1;Parent=gene-CYJ02_RS06030;Dbxref=GenBank:WP_014613606.1;Name=WP_014613606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613606.1;locus_tag=CYJ02_RS06030;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613606.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 49741 50691 . - . ID=gene-CYJ02_RS06035;Name=CYJ02_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06035;old_locus_tag=CYJ02_06035 NZ_PJUQ01000009.1 Protein Homology CDS 49741 50691 . - 0 ID=cds-WP_014613605.1;Parent=gene-CYJ02_RS06035;Dbxref=GenBank:WP_014613605.1;Name=WP_014613605.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613605.1;locus_tag=CYJ02_RS06035;product=L-lactate dehydrogenase;protein_id=WP_014613605.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 50852 51676 . - . ID=gene-CYJ02_RS06040;Name=CYJ02_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06040;old_locus_tag=CYJ02_06040 NZ_PJUQ01000009.1 Protein Homology CDS 50852 51676 . - 0 ID=cds-WP_101431475.1;Parent=gene-CYJ02_RS06040;Dbxref=GenBank:WP_101431475.1;Name=WP_101431475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=CYJ02_RS06040;product=alpha/beta fold hydrolase;protein_id=WP_101431475.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 51819 52151 . - . ID=gene-CYJ02_RS06045;Name=CYJ02_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06045;old_locus_tag=CYJ02_06045 NZ_PJUQ01000009.1 Protein Homology CDS 51819 52151 . - 0 ID=cds-WP_014613603.1;Parent=gene-CYJ02_RS06045;Dbxref=GenBank:WP_014613603.1;Name=WP_014613603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168390.1;locus_tag=CYJ02_RS06045;product=hypothetical protein;protein_id=WP_014613603.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 52637 53623 . + . ID=gene-CYJ02_RS06050;Name=CYJ02_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06050;old_locus_tag=CYJ02_06050 NZ_PJUQ01000009.1 Protein Homology CDS 52637 53623 . + 0 ID=cds-WP_101431476.1;Parent=gene-CYJ02_RS06050;Dbxref=GenBank:WP_101431476.1;Name=WP_101431476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613601.1;locus_tag=CYJ02_RS06050;product=proline dehydrogenase family protein;protein_id=WP_101431476.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 53748 54212 . - . ID=gene-CYJ02_RS06055;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CYJ02_RS06055;old_locus_tag=CYJ02_06055 NZ_PJUQ01000009.1 Protein Homology CDS 53748 54212 . - 0 ID=cds-WP_031253731.1;Parent=gene-CYJ02_RS06055;Dbxref=GenBank:WP_031253731.1;Name=WP_031253731.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500388.1;locus_tag=CYJ02_RS06055;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_031253731.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 54230 55411 . - . ID=gene-CYJ02_RS06060;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06060;old_locus_tag=CYJ02_06060 NZ_PJUQ01000009.1 Protein Homology CDS 54230 55411 . - 0 ID=cds-WP_101431477.1;Parent=gene-CYJ02_RS06060;Dbxref=GenBank:WP_101431477.1;Name=WP_101431477.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=CYJ02_RS06060;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_101431477.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 55425 56054 . - . ID=gene-CYJ02_RS06065;Name=CYJ02_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06065;old_locus_tag=CYJ02_06065 NZ_PJUQ01000009.1 Protein Homology CDS 55425 56054 . - 0 ID=cds-WP_014613598.1;Parent=gene-CYJ02_RS06065;Dbxref=GenBank:WP_014613598.1;Name=WP_014613598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=CYJ02_RS06065;product=riboflavin synthase;protein_id=WP_014613598.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 56059 57105 . - . ID=gene-CYJ02_RS06070;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06070;old_locus_tag=CYJ02_06070 NZ_PJUQ01000009.1 Protein Homology CDS 56059 57105 . - 0 ID=cds-WP_101431478.1;Parent=gene-CYJ02_RS06070;Dbxref=GenBank:WP_101431478.1;Name=WP_101431478.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=CYJ02_RS06070;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_101431478.1;transl_table=11 NZ_PJUQ01000009.1 cmsearch riboswitch 57251 57385 . - . ID=id-NZ_PJUQ01000009.1:57251..57385;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000009.1 RefSeq gene 57562 59115 . - . ID=gene-CYJ02_RS06075;Name=CYJ02_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06075;old_locus_tag=CYJ02_06075 NZ_PJUQ01000009.1 Protein Homology CDS 57562 59115 . - 0 ID=cds-WP_101431479.1;Parent=gene-CYJ02_RS06075;Dbxref=GenBank:WP_101431479.1;Name=WP_101431479.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729344.1;locus_tag=CYJ02_RS06075;product=FAD/NAD(P)-binding protein;protein_id=WP_101431479.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 59504 60367 . - . ID=gene-CYJ02_RS06080;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06080;old_locus_tag=CYJ02_06080 NZ_PJUQ01000009.1 Protein Homology CDS 59504 60367 . - 0 ID=cds-WP_014613595.1;Parent=gene-CYJ02_RS06080;Dbxref=GenBank:WP_014613595.1;Name=WP_014613595.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=CYJ02_RS06080;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_014613595.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 60524 60748 . - . ID=gene-CYJ02_RS06085;Name=CYJ02_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06085;old_locus_tag=CYJ02_06085 NZ_PJUQ01000009.1 Protein Homology CDS 60524 60748 . - 0 ID=cds-WP_014613594.1;Parent=gene-CYJ02_RS06085;Dbxref=GenBank:WP_014613594.1;Name=WP_014613594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500397.1;locus_tag=CYJ02_RS06085;product=hypothetical protein;protein_id=WP_014613594.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 60880 61434 . + . ID=gene-CYJ02_RS06090;Name=CYJ02_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06090;old_locus_tag=CYJ02_06090 NZ_PJUQ01000009.1 Protein Homology CDS 60880 61434 . + 0 ID=cds-WP_172426177.1;Parent=gene-CYJ02_RS06090;Dbxref=GenBank:WP_172426177.1;Name=WP_172426177.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=CYJ02_RS06090;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_172426177.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 61437 61868 . + . ID=gene-CYJ02_RS06095;Name=CYJ02_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06095;old_locus_tag=CYJ02_06095 NZ_PJUQ01000009.1 Protein Homology CDS 61437 61868 . + 0 ID=cds-WP_014613592.1;Parent=gene-CYJ02_RS06095;Dbxref=GenBank:WP_014613592.1;Name=WP_014613592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165954.1;locus_tag=CYJ02_RS06095;product=competence protein ComK;protein_id=WP_014613592.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 61871 62320 . - . ID=gene-CYJ02_RS06100;Name=CYJ02_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06100;old_locus_tag=CYJ02_06100 NZ_PJUQ01000009.1 Protein Homology CDS 61871 62320 . - 0 ID=cds-WP_063278602.1;Parent=gene-CYJ02_RS06100;Dbxref=GenBank:WP_063278602.1;Name=WP_063278602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165953.1;locus_tag=CYJ02_RS06100;product=hypothetical protein;protein_id=WP_063278602.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 62487 63197 . - . ID=gene-CYJ02_RS06105;Name=CYJ02_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06105;old_locus_tag=CYJ02_06105 NZ_PJUQ01000009.1 Protein Homology CDS 62487 63197 . - 0 ID=cds-WP_101431480.1;Parent=gene-CYJ02_RS06105;Dbxref=GenBank:WP_101431480.1;Name=WP_101431480.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CYJ02_RS06105;product=transaldolase;protein_id=WP_101431480.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 63350 63652 . + . ID=gene-CYJ02_RS06110;Name=CYJ02_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06110;old_locus_tag=CYJ02_06110 NZ_PJUQ01000009.1 Protein Homology CDS 63350 63652 . + 0 ID=cds-WP_014613589.1;Parent=gene-CYJ02_RS06110;Dbxref=GenBank:WP_014613589.1;Name=WP_014613589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=CYJ02_RS06110;product=hypothetical protein;protein_id=WP_014613589.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 63685 64050 . + . ID=gene-CYJ02_RS06115;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06115;old_locus_tag=CYJ02_06115 NZ_PJUQ01000009.1 Protein Homology CDS 63685 64050 . + 0 ID=cds-WP_101431481.1;Parent=gene-CYJ02_RS06115;Dbxref=GenBank:WP_101431481.1;Name=WP_101431481.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613588.1;locus_tag=CYJ02_RS06115;product=fluoride efflux transporter CrcB;protein_id=WP_101431481.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 64047 64394 . + . ID=gene-CYJ02_RS06120;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ02_RS06120;old_locus_tag=CYJ02_06120 NZ_PJUQ01000009.1 Protein Homology CDS 64047 64394 . + 0 ID=cds-WP_014613587.1;Parent=gene-CYJ02_RS06120;Dbxref=GenBank:WP_014613587.1;Name=WP_014613587.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219661.1;locus_tag=CYJ02_RS06120;product=fluoride efflux transporter CrcB;protein_id=WP_014613587.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 64496 65332 . - . ID=gene-CYJ02_RS06125;Name=CYJ02_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06125;old_locus_tag=CYJ02_06125 NZ_PJUQ01000009.1 Protein Homology CDS 64496 65332 . - 0 ID=cds-WP_014613586.1;Parent=gene-CYJ02_RS06125;Dbxref=GenBank:WP_014613586.1;Name=WP_014613586.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=CYJ02_RS06125;product=aldo/keto reductase;protein_id=WP_014613586.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 65474 66385 . - . ID=gene-CYJ02_RS06130;Name=CYJ02_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06130;old_locus_tag=CYJ02_06130 NZ_PJUQ01000009.1 Protein Homology CDS 65474 66385 . - 0 ID=cds-WP_014613585.1;Parent=gene-CYJ02_RS06130;Dbxref=GenBank:WP_014613585.1;Name=WP_014613585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219663.1;locus_tag=CYJ02_RS06130;product=NERD domain-containing protein;protein_id=WP_014613585.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 66473 67672 . - . ID=gene-CYJ02_RS06135;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CYJ02_RS06135;old_locus_tag=CYJ02_06135 NZ_PJUQ01000009.1 Protein Homology CDS 66473 67672 . - 0 ID=cds-WP_014613584.1;Parent=gene-CYJ02_RS06135;Dbxref=GenBank:WP_014613584.1;Name=WP_014613584.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=CYJ02_RS06135;product=methionine adenosyltransferase;protein_id=WP_014613584.1;transl_table=11 NZ_PJUQ01000009.1 cmsearch riboswitch 67777 67888 . - . ID=id-NZ_PJUQ01000009.1:67777..67888;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PJUQ01000009.1 RefSeq gene 68136 69716 . + . ID=gene-CYJ02_RS06140;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CYJ02_RS06140;old_locus_tag=CYJ02_06140 NZ_PJUQ01000009.1 Protein Homology CDS 68136 69716 . + 0 ID=cds-WP_014613583.1;Parent=gene-CYJ02_RS06140;Dbxref=GenBank:WP_014613583.1;Name=WP_014613583.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=CYJ02_RS06140;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014613583.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 70114 70890 . - . ID=gene-CYJ02_RS06145;Name=CYJ02_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06145;old_locus_tag=CYJ02_06145 NZ_PJUQ01000009.1 Protein Homology CDS 70114 70890 . - 0 ID=cds-WP_041613219.1;Parent=gene-CYJ02_RS06145;Dbxref=GenBank:WP_041613219.1;Name=WP_041613219.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219665.1;locus_tag=CYJ02_RS06145;product=alpha/beta hydrolase family protein;protein_id=WP_041613219.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 70871 71341 . - . ID=gene-CYJ02_RS06150;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06150;old_locus_tag=CYJ02_06150 NZ_PJUQ01000009.1 Protein Homology CDS 70871 71341 . - 0 ID=cds-WP_014613581.1;Parent=gene-CYJ02_RS06150;Dbxref=GenBank:WP_014613581.1;Name=WP_014613581.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=CYJ02_RS06150;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_014613581.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 71400 71651 . + . ID=gene-CYJ02_RS06155;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06155;old_locus_tag=CYJ02_06155 NZ_PJUQ01000009.1 Protein Homology CDS 71400 71651 . + 0 ID=cds-WP_014613580.1;Parent=gene-CYJ02_RS06155;Dbxref=GenBank:WP_014613580.1;Name=WP_014613580.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=CYJ02_RS06155;product=membrane protein insertion efficiency factor YidD;protein_id=WP_014613580.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 71627 72613 . - . ID=gene-CYJ02_RS06160;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CYJ02_RS06160;old_locus_tag=CYJ02_06160 NZ_PJUQ01000009.1 Protein Homology CDS 71627 72613 . - 0 ID=cds-WP_014613579.1;Parent=gene-CYJ02_RS06160;Dbxref=GenBank:WP_014613579.1;Name=WP_014613579.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=CYJ02_RS06160;product=o-succinylbenzoate synthase;protein_id=WP_014613579.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 72616 74019 . - . ID=gene-CYJ02_RS06165;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CYJ02_RS06165;old_locus_tag=CYJ02_06165 NZ_PJUQ01000009.1 Protein Homology CDS 72616 74019 . - 0 ID=cds-WP_101431482.1;Parent=gene-CYJ02_RS06165;Dbxref=GenBank:WP_101431482.1;Name=WP_101431482.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641589.1;locus_tag=CYJ02_RS06165;product=o-succinylbenzoate--CoA ligase;protein_id=WP_101431482.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 74194 75828 . - . ID=gene-CYJ02_RS06170;Name=CYJ02_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06170;old_locus_tag=CYJ02_06170 NZ_PJUQ01000009.1 Protein Homology CDS 74194 75828 . - 0 ID=cds-WP_101431483.1;Parent=gene-CYJ02_RS06170;Dbxref=GenBank:WP_101431483.1;Name=WP_101431483.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165938.1;locus_tag=CYJ02_RS06170;product=BglG family transcription antiterminator;protein_id=WP_101431483.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 75892 76587 . - . ID=gene-CYJ02_RS06175;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CYJ02_RS06175;old_locus_tag=CYJ02_06175 NZ_PJUQ01000009.1 Protein Homology CDS 75892 76587 . - 0 ID=cds-WP_014613576.1;Parent=gene-CYJ02_RS06175;Dbxref=GenBank:WP_014613576.1;Name=WP_014613576.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219668.1;locus_tag=CYJ02_RS06175;product=L-ribulose-5-phosphate 4-epimerase AraD;protein_id=WP_014613576.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 76580 77443 . - . ID=gene-CYJ02_RS06180;Name=CYJ02_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06180;old_locus_tag=CYJ02_06180 NZ_PJUQ01000009.1 Protein Homology CDS 76580 77443 . - 0 ID=cds-WP_015729351.1;Parent=gene-CYJ02_RS06180;Dbxref=GenBank:WP_015729351.1;Name=WP_015729351.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729351.1;locus_tag=CYJ02_RS06180;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_015729351.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 77443 78081 . - . ID=gene-CYJ02_RS06185;Name=CYJ02_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06185;old_locus_tag=CYJ02_06185 NZ_PJUQ01000009.1 Protein Homology CDS 77443 78081 . - 0 ID=cds-WP_063284452.1;Parent=gene-CYJ02_RS06185;Dbxref=GenBank:WP_063284452.1;Name=WP_063284452.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729352.1;locus_tag=CYJ02_RS06185;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_063284452.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 78098 78565 . - . ID=gene-CYJ02_RS06190;Name=CYJ02_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06190;old_locus_tag=CYJ02_06190 NZ_PJUQ01000009.1 Protein Homology CDS 78098 78565 . - 0 ID=cds-WP_014613573.1;Parent=gene-CYJ02_RS06190;Dbxref=GenBank:WP_014613573.1;Name=WP_014613573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165934.1;locus_tag=CYJ02_RS06190;product=PTS sugar transporter subunit IIA;protein_id=WP_014613573.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 78578 78856 . - . ID=gene-CYJ02_RS06195;Name=CYJ02_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06195;old_locus_tag=CYJ02_06195 NZ_PJUQ01000009.1 Protein Homology CDS 78578 78856 . - 0 ID=cds-WP_014613572.1;Parent=gene-CYJ02_RS06195;Dbxref=GenBank:WP_014613572.1;Name=WP_014613572.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613572.1;locus_tag=CYJ02_RS06195;product=PTS sugar transporter subunit IIB;protein_id=WP_014613572.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 78880 80307 . - . ID=gene-CYJ02_RS06200;Name=CYJ02_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06200;old_locus_tag=CYJ02_06200 NZ_PJUQ01000009.1 Protein Homology CDS 78880 80307 . - 0 ID=cds-WP_014613571.1;Parent=gene-CYJ02_RS06200;Dbxref=GenBank:WP_014613571.1;Name=WP_014613571.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613571.1;locus_tag=CYJ02_RS06200;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014613571.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 80335 81405 . - . ID=gene-CYJ02_RS06205;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CYJ02_RS06205;old_locus_tag=CYJ02_06205 NZ_PJUQ01000009.1 Protein Homology CDS 80335 81405 . - 0 ID=cds-WP_014613570.1;Parent=gene-CYJ02_RS06205;Dbxref=GenBank:WP_014613570.1;Name=WP_014613570.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613570.1;locus_tag=CYJ02_RS06205;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_014613570.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 81547 82095 . - . ID=gene-CYJ02_RS06210;Name=CYJ02_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06210;old_locus_tag=CYJ02_06210 NZ_PJUQ01000009.1 Protein Homology CDS 81547 82095 . - 0 ID=cds-WP_065354152.1;Parent=gene-CYJ02_RS06210;Dbxref=GenBank:WP_065354152.1;Name=WP_065354152.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613569.1;locus_tag=CYJ02_RS06210;product=histidine phosphatase family protein;protein_id=WP_065354152.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 82617 83549 . + . ID=gene-CYJ02_RS06215;Name=CYJ02_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06215;old_locus_tag=CYJ02_06215 NZ_PJUQ01000009.1 Protein Homology CDS 82617 83549 . + 0 ID=cds-WP_101431484.1;Parent=gene-CYJ02_RS06215;Dbxref=GenBank:WP_101431484.1;Name=WP_101431484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916699.1;locus_tag=CYJ02_RS06215;product=leukocidin/hemolysin toxin family protein;protein_id=WP_101431484.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 83551 84531 . + . ID=gene-CYJ02_RS06220;Name=CYJ02_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06220;old_locus_tag=CYJ02_06220 NZ_PJUQ01000009.1 Protein Homology CDS 83551 84531 . + 0 ID=cds-WP_014613567.1;Parent=gene-CYJ02_RS06220;Dbxref=GenBank:WP_014613567.1;Name=WP_014613567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613567.1;locus_tag=CYJ02_RS06220;product=leukocidin/hemolysin toxin family protein;protein_id=WP_014613567.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq pseudogene 84590 84823 . - . ID=gene-CYJ02_RS06225;Name=CYJ02_RS06225;end_range=84823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS06225;old_locus_tag=CYJ02_06225;partial=true;pseudo=true NZ_PJUQ01000009.1 Protein Homology CDS 84590 84823 . - 0 ID=cds-CYJ02_RS06225;Parent=gene-CYJ02_RS06225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=84823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729353.1;locus_tag=CYJ02_RS06225;partial=true;product=phage capsid protein;pseudo=true;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 84920 85306 . + . ID=gene-CYJ02_RS06230;Name=CYJ02_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06230;old_locus_tag=CYJ02_06230 NZ_PJUQ01000009.1 Protein Homology CDS 84920 85306 . + 0 ID=cds-WP_241901317.1;Parent=gene-CYJ02_RS06230;Dbxref=GenBank:WP_241901317.1;Name=WP_241901317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=CYJ02_RS06230;product=DUF418 domain-containing protein;protein_id=WP_241901317.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 85597 86838 . - . ID=gene-CYJ02_RS06235;Name=CYJ02_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06235;old_locus_tag=CYJ02_06235 NZ_PJUQ01000009.1 Protein Homology CDS 85597 86838 . - 0 ID=cds-WP_099991805.1;Parent=gene-CYJ02_RS06235;Dbxref=GenBank:WP_099991805.1;Name=WP_099991805.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729788.1;locus_tag=CYJ02_RS06235;product=aminoacyltransferase;protein_id=WP_099991805.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 87137 88117 . + . ID=gene-CYJ02_RS06240;Name=CYJ02_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06240;old_locus_tag=CYJ02_06240 NZ_PJUQ01000009.1 Protein Homology CDS 87137 88117 . + 0 ID=cds-WP_020220073.1;Parent=gene-CYJ02_RS06240;Dbxref=GenBank:WP_020220073.1;Name=WP_020220073.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729787.1;locus_tag=CYJ02_RS06240;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220073.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 88302 89378 . + . ID=gene-CYJ02_RS06245;Name=CYJ02_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06245;old_locus_tag=CYJ02_06245 NZ_PJUQ01000009.1 Protein Homology CDS 88302 89378 . + 0 ID=cds-WP_096535972.1;Parent=gene-CYJ02_RS06245;Dbxref=GenBank:WP_096535972.1;Name=WP_096535972.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498776.1;locus_tag=CYJ02_RS06245;product=Gfo/Idh/MocA family protein;protein_id=WP_096535972.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 89400 90440 . + . ID=gene-CYJ02_RS06250;Name=CYJ02_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06250;old_locus_tag=CYJ02_06250 NZ_PJUQ01000009.1 Protein Homology CDS 89400 90440 . + 0 ID=cds-WP_101431485.1;Parent=gene-CYJ02_RS06250;Dbxref=GenBank:WP_101431485.1;Name=WP_101431485.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729785.1;locus_tag=CYJ02_RS06250;product=Gfo/Idh/MocA family protein;protein_id=WP_101431485.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 90456 91424 . + . ID=gene-CYJ02_RS06255;Name=CYJ02_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06255;old_locus_tag=CYJ02_06255 NZ_PJUQ01000009.1 Protein Homology CDS 90456 91424 . + 0 ID=cds-WP_063284487.1;Parent=gene-CYJ02_RS06255;Dbxref=GenBank:WP_063284487.1;Name=WP_063284487.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498778.1;locus_tag=CYJ02_RS06255;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_063284487.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 91471 93117 . + . ID=gene-CYJ02_RS06260;Name=CYJ02_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06260;old_locus_tag=CYJ02_06260 NZ_PJUQ01000009.1 Protein Homology CDS 91471 93117 . + 0 ID=cds-WP_198586535.1;Parent=gene-CYJ02_RS06260;Dbxref=GenBank:WP_198586535.1;Name=WP_198586535.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364983.1;locus_tag=CYJ02_RS06260;product=glycoside hydrolase family 13 protein;protein_id=WP_198586535.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 93313 93633 . + . ID=gene-CYJ02_RS06265;Name=CYJ02_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06265;old_locus_tag=CYJ02_06265 NZ_PJUQ01000009.1 Protein Homology CDS 93313 93633 . + 0 ID=cds-WP_226957591.1;Parent=gene-CYJ02_RS06265;Dbxref=GenBank:WP_226957591.1;Name=WP_226957591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166788.1;locus_tag=CYJ02_RS06265;product=hypothetical protein;protein_id=WP_226957591.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 93685 94524 . - . ID=gene-CYJ02_RS06270;Name=CYJ02_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06270;old_locus_tag=CYJ02_06270 NZ_PJUQ01000009.1 Protein Homology CDS 93685 94524 . - 0 ID=cds-WP_101431487.1;Parent=gene-CYJ02_RS06270;Dbxref=GenBank:WP_101431487.1;Name=WP_101431487.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166790.1;locus_tag=CYJ02_RS06270;product=sugar ABC transporter permease;protein_id=WP_101431487.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 94526 95794 . - . ID=gene-CYJ02_RS06275;Name=CYJ02_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06275;old_locus_tag=CYJ02_06275 NZ_PJUQ01000009.1 Protein Homology CDS 94526 95794 . - 0 ID=cds-WP_063284486.1;Parent=gene-CYJ02_RS06275;Dbxref=GenBank:WP_063284486.1;Name=WP_063284486.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498774.1;locus_tag=CYJ02_RS06275;product=sugar ABC transporter permease;protein_id=WP_063284486.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 95809 97068 . - . ID=gene-CYJ02_RS06280;Name=CYJ02_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06280;old_locus_tag=CYJ02_06280 NZ_PJUQ01000009.1 Protein Homology CDS 95809 97068 . - 0 ID=cds-WP_015729782.1;Parent=gene-CYJ02_RS06280;Dbxref=GenBank:WP_015729782.1;Name=WP_015729782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729782.1;locus_tag=CYJ02_RS06280;product=extracellular solute-binding protein;protein_id=WP_015729782.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 97081 98178 . - . ID=gene-CYJ02_RS06285;Name=CYJ02_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06285;old_locus_tag=CYJ02_06285 NZ_PJUQ01000009.1 Protein Homology CDS 97081 98178 . - 0 ID=cds-WP_014612742.1;Parent=gene-CYJ02_RS06285;Dbxref=GenBank:WP_014612742.1;Name=WP_014612742.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498772.1;locus_tag=CYJ02_RS06285;product=ABC transporter ATP-binding protein;protein_id=WP_014612742.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 98611 99783 . - . ID=gene-CYJ02_RS06290;Name=CYJ02_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06290;old_locus_tag=CYJ02_06290 NZ_PJUQ01000009.1 Protein Homology CDS 98611 99783 . - 0 ID=cds-WP_014612743.1;Parent=gene-CYJ02_RS06290;Dbxref=GenBank:WP_014612743.1;Name=WP_014612743.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612743.1;locus_tag=CYJ02_RS06290;product=cation:proton antiporter;protein_id=WP_014612743.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 99789 100274 . - . ID=gene-CYJ02_RS06295;Name=CYJ02_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06295;old_locus_tag=CYJ02_06295 NZ_PJUQ01000009.1 Protein Homology CDS 99789 100274 . - 0 ID=cds-WP_014612744.1;Parent=gene-CYJ02_RS06295;Dbxref=GenBank:WP_014612744.1;Name=WP_014612744.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612744.1;locus_tag=CYJ02_RS06295;product=cation:proton antiporter regulatory subunit;protein_id=WP_014612744.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 100420 100863 . + . ID=gene-CYJ02_RS06300;Name=CYJ02_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06300;old_locus_tag=CYJ02_06300 NZ_PJUQ01000009.1 Protein Homology CDS 100420 100863 . + 0 ID=cds-WP_015729781.1;Parent=gene-CYJ02_RS06300;Dbxref=GenBank:WP_015729781.1;Name=WP_015729781.1;Ontology_term=GO:0005506,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729781.1;locus_tag=CYJ02_RS06300;product=(4Fe-4S)-binding protein;protein_id=WP_015729781.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 100879 101769 . + . ID=gene-CYJ02_RS06305;Name=CYJ02_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06305;old_locus_tag=CYJ02_06305 NZ_PJUQ01000009.1 Protein Homology CDS 100879 101769 . + 0 ID=cds-WP_014612746.1;Parent=gene-CYJ02_RS06305;Dbxref=GenBank:WP_014612746.1;Name=WP_014612746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612746.1;locus_tag=CYJ02_RS06305;product=VOC family protein;protein_id=WP_014612746.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq gene 101995 103185 . + . ID=gene-CYJ02_RS06310;Name=CYJ02_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ02_RS06310;old_locus_tag=CYJ02_06310 NZ_PJUQ01000009.1 Protein Homology CDS 101995 103185 . + 0 ID=cds-WP_101431488.1;Parent=gene-CYJ02_RS06310;Dbxref=GenBank:WP_101431488.1;Name=WP_101431488.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612747.1;locus_tag=CYJ02_RS06310;product=MFS transporter;protein_id=WP_101431488.1;transl_table=11 NZ_PJUQ01000009.1 RefSeq pseudogene 103417 104062 . - . ID=gene-CYJ02_RS13040;Name=CYJ02_RS13040;end_range=104062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS13040;partial=true;pseudo=true NZ_PJUQ01000009.1 Protein Homology CDS 103417 104062 . - 2 ID=cds-CYJ02_RS13040;Parent=gene-CYJ02_RS13040;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=104062,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_205410313.1;locus_tag=CYJ02_RS13040;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PJUQ01000083.1 1 213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000083.1 RefSeq region 1 213 . + . ID=NZ_PJUQ01000083.1:1..213;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000083.1 RefSeq pseudogene 1 213 . - . ID=gene-CYJ02_RS12970;Name=CYJ02_RS12970;end_range=213,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ02_RS12970;partial=true;pseudo=true;start_range=.,1 NZ_PJUQ01000083.1 Protein Homology CDS 1 213 . - 2 ID=cds-CYJ02_RS12970;Parent=gene-CYJ02_RS12970;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ02_RS12970;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PJUQ01000084.1 1 215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734 NZ_PJUQ01000084.1 RefSeq region 1 215 . + . ID=NZ_PJUQ01000084.1:1..215;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=114N NZ_PJUQ01000084.1 RefSeq sequence_feature 9 210 . + . ID=id-NZ_PJUQ01000084.1:9..210;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature ###