##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM284726v2
#!genome-build-accession NCBI_Assembly:GCF_002847265.1
#!annotation-date 09/19/2026 16:01:44
#!annotation-source NCBI RefSeq GCF_002847265.1-RS_2026_09_19
##sequence-region NZ_PJUP02000012.1 1 74317
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000012.1	RefSeq	region	1	74317	.	+	.	ID=NZ_PJUP02000012.1:1..74317;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000012.1	RefSeq	gene	237	572	.	+	.	ID=gene-CYJ03_RS05575;Name=CYJ03_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05575;old_locus_tag=CYJ03_005565
NZ_PJUP02000012.1	Protein Homology	CDS	237	572	.	+	0	ID=cds-WP_037543809.1;Parent=gene-CYJ03_RS05575;Dbxref=GenBank:WP_037543809.1;Name=WP_037543809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614582.1;locus_tag=CYJ03_RS05575;product=SA0632 family lipoprotein;protein_id=WP_037543809.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	695	994	.	+	.	ID=gene-CYJ03_RS05580;Name=CYJ03_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05580;old_locus_tag=CYJ03_005570
NZ_PJUP02000012.1	Protein Homology	CDS	695	994	.	+	0	ID=cds-WP_014614581.1;Parent=gene-CYJ03_RS05580;Dbxref=GenBank:WP_014614581.1;Name=WP_014614581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=CYJ03_RS05580;product=hypothetical protein;protein_id=WP_014614581.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	1204	1752	.	+	.	ID=gene-CYJ03_RS05585;Name=CYJ03_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05585;old_locus_tag=CYJ03_005575
NZ_PJUP02000012.1	Protein Homology	CDS	1204	1752	.	+	0	ID=cds-WP_014614580.1;Parent=gene-CYJ03_RS05585;Dbxref=GenBank:WP_014614580.1;Name=WP_014614580.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614580.1;locus_tag=CYJ03_RS05585;product=GNAT family N-acetyltransferase;protein_id=WP_014614580.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	2563	3129	.	-	.	ID=gene-CYJ03_RS05590;Name=CYJ03_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05590;old_locus_tag=CYJ03_005580
NZ_PJUP02000012.1	Protein Homology	CDS	2563	3129	.	-	0	ID=cds-WP_104052232.1;Parent=gene-CYJ03_RS05590;Dbxref=GenBank:WP_104052232.1;Name=WP_104052232.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=CYJ03_RS05590;product=LOG family protein;protein_id=WP_104052232.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	3230	3676	.	-	.	ID=gene-CYJ03_RS05595;Name=CYJ03_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05595;old_locus_tag=CYJ03_005585
NZ_PJUP02000012.1	Protein Homology	CDS	3230	3676	.	-	0	ID=cds-WP_014614578.1;Parent=gene-CYJ03_RS05595;Dbxref=GenBank:WP_014614578.1;Name=WP_014614578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166183.1;locus_tag=CYJ03_RS05595;product=YaiI/YqxD family protein;protein_id=WP_014614578.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	3677	4666	.	-	.	ID=gene-CYJ03_RS05600;Name=CYJ03_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05600;old_locus_tag=CYJ03_005590
NZ_PJUP02000012.1	Protein Homology	CDS	3677	4666	.	-	0	ID=cds-WP_096636582.1;Parent=gene-CYJ03_RS05600;Dbxref=GenBank:WP_096636582.1;Name=WP_096636582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614577.1;locus_tag=CYJ03_RS05600;product=hypothetical protein;protein_id=WP_096636582.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	5049	5903	.	-	.	ID=gene-CYJ03_RS05605;Name=CYJ03_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05605;old_locus_tag=CYJ03_005595
NZ_PJUP02000012.1	Protein Homology	CDS	5049	5903	.	-	0	ID=cds-WP_037543807.1;Parent=gene-CYJ03_RS05605;Dbxref=GenBank:WP_037543807.1;Name=WP_037543807.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=CYJ03_RS05605;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_037543807.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	6182	7819	.	+	.	ID=gene-CYJ03_RS05610;Name=CYJ03_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05610;old_locus_tag=CYJ03_005600
NZ_PJUP02000012.1	Protein Homology	CDS	6182	7819	.	+	0	ID=cds-WP_104052217.1;Parent=gene-CYJ03_RS05610;Dbxref=GenBank:WP_104052217.1;Name=WP_104052217.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=L-cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614575.1;locus_tag=CYJ03_RS05610;product=ABC transporter ATP-binding protein/permease;protein_id=WP_104052217.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	7820	9481	.	+	.	ID=gene-CYJ03_RS05615;Name=CYJ03_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05615;old_locus_tag=CYJ03_005605
NZ_PJUP02000012.1	Protein Homology	CDS	7820	9481	.	+	0	ID=cds-WP_104052218.1;Parent=gene-CYJ03_RS05615;Dbxref=GenBank:WP_104052218.1;Name=WP_104052218.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=CYJ03_RS05615;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_104052218.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	9867	10304	.	-	.	ID=gene-CYJ03_RS05625;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05625;old_locus_tag=CYJ03_005615
NZ_PJUP02000012.1	Protein Homology	CDS	9867	10304	.	-	0	ID=cds-WP_014614573.1;Parent=gene-CYJ03_RS05625;Dbxref=GenBank:WP_014614573.1;Name=WP_014614573.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=CYJ03_RS05625;product=global transcriptional regulator MgrA;protein_id=WP_014614573.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	10536	11465	.	+	.	ID=gene-CYJ03_RS05630;Name=CYJ03_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05630;old_locus_tag=CYJ03_005620
NZ_PJUP02000012.1	Protein Homology	CDS	10536	11465	.	+	0	ID=cds-WP_015728720.1;Parent=gene-CYJ03_RS05630;Dbxref=GenBank:WP_015728720.1;Name=WP_015728720.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614572.1;locus_tag=CYJ03_RS05630;product=CobW family GTP-binding protein;protein_id=WP_015728720.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	11492	12400	.	+	.	ID=gene-CYJ03_RS05635;Name=CYJ03_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05635;old_locus_tag=CYJ03_005625
NZ_PJUP02000012.1	Protein Homology	CDS	11492	12400	.	+	0	ID=cds-WP_015728721.1;Parent=gene-CYJ03_RS05635;Dbxref=GenBank:WP_015728721.1;Name=WP_015728721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614571.1;locus_tag=CYJ03_RS05635;product=aldo/keto reductase;protein_id=WP_015728721.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	12483	12764	.	+	.	ID=gene-CYJ03_RS05640;Name=CYJ03_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05640;old_locus_tag=CYJ03_005630
NZ_PJUP02000012.1	Protein Homology	CDS	12483	12764	.	+	0	ID=cds-WP_014614570.1;Parent=gene-CYJ03_RS05640;Dbxref=GenBank:WP_014614570.1;Name=WP_014614570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=CYJ03_RS05640;product=hypothetical protein;protein_id=WP_014614570.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	12952	14280	.	+	.	ID=gene-CYJ03_RS05645;Name=CYJ03_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05645;old_locus_tag=CYJ03_005635
NZ_PJUP02000012.1	Protein Homology	CDS	12952	14280	.	+	0	ID=cds-WP_238402926.1;Parent=gene-CYJ03_RS05645;Dbxref=GenBank:WP_238402926.1;Name=WP_238402926.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614569.1;locus_tag=CYJ03_RS05645;product=AAA family ATPase;protein_id=WP_238402926.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	14335	14910	.	+	.	ID=gene-CYJ03_RS05650;Name=CYJ03_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05650;old_locus_tag=CYJ03_005640
NZ_PJUP02000012.1	Protein Homology	CDS	14335	14910	.	+	0	ID=cds-WP_258058100.1;Parent=gene-CYJ03_RS05650;Dbxref=GenBank:WP_258058100.1;Name=WP_258058100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025084.7;locus_tag=CYJ03_RS05650;product=RloB family protein;protein_id=WP_258058100.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	15065	16003	.	+	.	ID=gene-CYJ03_RS05655;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CYJ03_RS05655;old_locus_tag=CYJ03_005645
NZ_PJUP02000012.1	Protein Homology	CDS	15065	16003	.	+	0	ID=cds-WP_014614567.1;Parent=gene-CYJ03_RS05655;Dbxref=GenBank:WP_014614567.1;Name=WP_014614567.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=CYJ03_RS05655;product=malate dehydrogenase;protein_id=WP_014614567.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	16134	16838	.	-	.	ID=gene-CYJ03_RS05660;Name=CYJ03_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05660;old_locus_tag=CYJ03_005650
NZ_PJUP02000012.1	Protein Homology	CDS	16134	16838	.	-	0	ID=cds-WP_225549916.1;Parent=gene-CYJ03_RS05660;Dbxref=GenBank:WP_225549916.1;Name=WP_225549916.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166173.1;locus_tag=CYJ03_RS05660;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_225549916.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	16879	17049	.	-	.	ID=gene-CYJ03_RS12555;Name=CYJ03_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12555
NZ_PJUP02000012.1	GeneMarkS-2+	CDS	16879	17049	.	-	0	ID=cds-WP_014614565.1;Parent=gene-CYJ03_RS12555;Dbxref=GenBank:WP_014614565.1;Name=WP_014614565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12555;product=hypothetical protein;protein_id=WP_014614565.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	17148	17765	.	-	.	ID=gene-CYJ03_RS05670;Name=CYJ03_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05670;old_locus_tag=CYJ03_005660
NZ_PJUP02000012.1	Protein Homology	CDS	17148	17765	.	-	0	ID=cds-WP_020219822.1;Parent=gene-CYJ03_RS05670;Dbxref=GenBank:WP_020219822.1;Name=WP_020219822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=CYJ03_RS05670;product=DUF1361 domain-containing protein;protein_id=WP_020219822.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	18083	19249	.	+	.	ID=gene-CYJ03_RS05675;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05675;old_locus_tag=CYJ03_005665
NZ_PJUP02000012.1	Protein Homology	CDS	18083	19249	.	+	0	ID=cds-WP_104052220.1;Parent=gene-CYJ03_RS05675;Dbxref=GenBank:WP_104052220.1;Name=WP_104052220.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=CYJ03_RS05675;product=multidrug efflux MFS transporter NorA;protein_id=WP_104052220.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	19387	21711	.	+	.	ID=gene-CYJ03_RS05680;Name=CYJ03_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05680;old_locus_tag=CYJ03_005670
NZ_PJUP02000012.1	Protein Homology	CDS	19387	21711	.	+	0	ID=cds-WP_063284907.1;Parent=gene-CYJ03_RS05680;Dbxref=GenBank:WP_063284907.1;Name=WP_063284907.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=CYJ03_RS05680;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_063284907.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	21734	22213	.	+	.	ID=gene-CYJ03_RS05685;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CYJ03_RS05685;old_locus_tag=CYJ03_005675
NZ_PJUP02000012.1	Protein Homology	CDS	21734	22213	.	+	0	ID=cds-WP_014614561.1;Parent=gene-CYJ03_RS05685;Dbxref=GenBank:WP_014614561.1;Name=WP_014614561.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614561.1;locus_tag=CYJ03_RS05685;product=Cys-tRNA(Pro) deacylase;protein_id=WP_014614561.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	22363	22542	.	+	.	ID=gene-CYJ03_RS05690;Name=CYJ03_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05690;old_locus_tag=CYJ03_005680
NZ_PJUP02000012.1	Protein Homology	CDS	22363	22542	.	+	0	ID=cds-WP_101457342.1;Parent=gene-CYJ03_RS05690;Dbxref=GenBank:WP_101457342.1;Name=WP_101457342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166167.1;locus_tag=CYJ03_RS05690;product=VraH family peptide resistance protein;protein_id=WP_101457342.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	22588	22791	.	-	.	ID=gene-CYJ03_RS05695;Name=CYJ03_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05695;old_locus_tag=CYJ03_005685
NZ_PJUP02000012.1	Protein Homology	CDS	22588	22791	.	-	0	ID=cds-WP_037543799.1;Parent=gene-CYJ03_RS05695;Dbxref=GenBank:WP_037543799.1;Name=WP_037543799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614559.1;locus_tag=CYJ03_RS05695;product=hypothetical protein;protein_id=WP_037543799.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	22903	23112	.	-	.	ID=gene-CYJ03_RS05700;Name=CYJ03_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05700;old_locus_tag=CYJ03_005690
NZ_PJUP02000012.1	Protein Homology	CDS	22903	23112	.	-	0	ID=cds-WP_101457330.1;Parent=gene-CYJ03_RS05700;Dbxref=GenBank:WP_101457330.1;Name=WP_101457330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614558.1;locus_tag=CYJ03_RS05700;product=DUF6007 family protein;protein_id=WP_101457330.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	23374	24126	.	+	.	ID=gene-CYJ03_RS05705;Name=CYJ03_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05705;old_locus_tag=CYJ03_005695
NZ_PJUP02000012.1	Protein Homology	CDS	23374	24126	.	+	0	ID=cds-WP_014614557.1;Parent=gene-CYJ03_RS05705;Dbxref=GenBank:WP_014614557.1;Name=WP_014614557.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614557.1;locus_tag=CYJ03_RS05705;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014614557.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	24126	25049	.	+	.	ID=gene-CYJ03_RS05710;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05710;old_locus_tag=CYJ03_005700
NZ_PJUP02000012.1	Protein Homology	CDS	24126	25049	.	+	0	ID=cds-WP_104052221.1;Parent=gene-CYJ03_RS05710;Dbxref=GenBank:WP_104052221.1;Name=WP_104052221.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=CYJ03_RS05710;product=1-phosphofructokinase;protein_id=WP_104052221.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	25051	26949	.	+	.	ID=gene-CYJ03_RS05715;Name=CYJ03_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05715;old_locus_tag=CYJ03_005705
NZ_PJUP02000012.1	Protein Homology	CDS	25051	26949	.	+	0	ID=cds-WP_104052222.1;Parent=gene-CYJ03_RS05715;Dbxref=GenBank:WP_104052222.1;Name=WP_104052222.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168551.1;locus_tag=CYJ03_RS05715;product=PTS fructose transporter subunit IIABC;protein_id=WP_104052222.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	27368	28723	.	+	.	ID=gene-CYJ03_RS05720;Name=CYJ03_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05720;old_locus_tag=CYJ03_005710
NZ_PJUP02000012.1	Protein Homology	CDS	27368	28723	.	+	0	ID=cds-WP_014614554.1;Parent=gene-CYJ03_RS05720;Dbxref=GenBank:WP_014614554.1;Name=WP_014614554.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168550.1;locus_tag=CYJ03_RS05720;product=hemolysin family protein;protein_id=WP_014614554.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	29540	30520	.	+	.	ID=gene-CYJ03_RS05725;Name=CYJ03_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05725;old_locus_tag=CYJ03_005715
NZ_PJUP02000012.1	Protein Homology	CDS	29540	30520	.	+	0	ID=cds-WP_063279013.1;Parent=gene-CYJ03_RS05725;Dbxref=GenBank:WP_063279013.1;Name=WP_063279013.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=CYJ03_RS05725;product=glycosyltransferase family 2 protein;protein_id=WP_063279013.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	30693	30947	.	-	.	ID=gene-CYJ03_RS05730;Name=CYJ03_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05730;old_locus_tag=CYJ03_005720
NZ_PJUP02000012.1	Protein Homology	CDS	30693	30947	.	-	0	ID=cds-WP_014614552.1;Parent=gene-CYJ03_RS05730;Dbxref=GenBank:WP_014614552.1;Name=WP_014614552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424461.1;locus_tag=CYJ03_RS05730;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_014614552.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	31017	31616	.	-	.	ID=gene-CYJ03_RS05735;Name=CYJ03_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05735;old_locus_tag=CYJ03_005725
NZ_PJUP02000012.1	Protein Homology	CDS	31017	31616	.	-	0	ID=cds-WP_037543793.1;Parent=gene-CYJ03_RS05735;Dbxref=GenBank:WP_037543793.1;Name=WP_037543793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614551.1;locus_tag=CYJ03_RS05735;product=hypothetical protein;protein_id=WP_037543793.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	31764	32477	.	-	.	ID=gene-CYJ03_RS05740;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CYJ03_RS05740;old_locus_tag=CYJ03_005730
NZ_PJUP02000012.1	Protein Homology	CDS	31764	32477	.	-	0	ID=cds-WP_014614550.1;Parent=gene-CYJ03_RS05740;Dbxref=GenBank:WP_014614550.1;Name=WP_014614550.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445901.1;locus_tag=CYJ03_RS05740;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_014614550.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	32470	32901	.	-	.	ID=gene-CYJ03_RS05745;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CYJ03_RS05745;old_locus_tag=CYJ03_005735
NZ_PJUP02000012.1	Protein Homology	CDS	32470	32901	.	-	0	ID=cds-WP_014614549.1;Parent=gene-CYJ03_RS05745;Dbxref=GenBank:WP_014614549.1;Name=WP_014614549.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=CYJ03_RS05745;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_014614549.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	32901	33569	.	-	.	ID=gene-CYJ03_RS05750;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CYJ03_RS05750;old_locus_tag=CYJ03_005740
NZ_PJUP02000012.1	Protein Homology	CDS	32901	33569	.	-	0	ID=cds-WP_014614548.1;Parent=gene-CYJ03_RS05750;Dbxref=GenBank:WP_014614548.1;Name=WP_014614548.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166155.1;locus_tag=CYJ03_RS05750;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_014614548.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	33830	34423	.	+	.	ID=gene-CYJ03_RS05755;Name=CYJ03_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05755;old_locus_tag=CYJ03_005745
NZ_PJUP02000012.1	Protein Homology	CDS	33830	34423	.	+	0	ID=cds-WP_101457328.1;Parent=gene-CYJ03_RS05755;Dbxref=GenBank:WP_101457328.1;Name=WP_101457328.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=CYJ03_RS05755;product=anthranilate synthase component II;protein_id=WP_101457328.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	34407	35555	.	+	.	ID=gene-CYJ03_RS05760;Name=CYJ03_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05760;old_locus_tag=CYJ03_005750
NZ_PJUP02000012.1	Protein Homology	CDS	34407	35555	.	+	0	ID=cds-WP_037543791.1;Parent=gene-CYJ03_RS05760;Dbxref=GenBank:WP_037543791.1;Name=WP_037543791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=CYJ03_RS05760;product=chorismate-binding protein;protein_id=WP_037543791.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	35552	36166	.	+	.	ID=gene-CYJ03_RS05765;Name=CYJ03_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05765;old_locus_tag=CYJ03_005755
NZ_PJUP02000012.1	Protein Homology	CDS	35552	36166	.	+	0	ID=cds-WP_065354524.1;Parent=gene-CYJ03_RS05765;Dbxref=GenBank:WP_065354524.1;Name=WP_065354524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166152.1;locus_tag=CYJ03_RS05765;product=aminotransferase class IV;protein_id=WP_065354524.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	36175	36384	.	+	.	ID=gene-CYJ03_RS05770;Name=CYJ03_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05770;old_locus_tag=CYJ03_005760
NZ_PJUP02000012.1	Protein Homology	CDS	36175	36384	.	+	0	ID=cds-WP_014614545.1;Parent=gene-CYJ03_RS05770;Dbxref=GenBank:WP_014614545.1;Name=WP_014614545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614545.1;locus_tag=CYJ03_RS05770;product=hypothetical protein;protein_id=WP_014614545.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	36395	37078	.	+	.	ID=gene-CYJ03_RS05775;Name=CYJ03_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05775;old_locus_tag=CYJ03_005765
NZ_PJUP02000012.1	Protein Homology	CDS	36395	37078	.	+	0	ID=cds-WP_014614544.1;Parent=gene-CYJ03_RS05775;Dbxref=GenBank:WP_014614544.1;Name=WP_014614544.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166150.1;locus_tag=CYJ03_RS05775;product=5-oxoprolinase subunit B family protein;protein_id=WP_014614544.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	37075	38079	.	+	.	ID=gene-CYJ03_RS05780;Name=CYJ03_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05780;old_locus_tag=CYJ03_005770
NZ_PJUP02000012.1	Protein Homology	CDS	37075	38079	.	+	0	ID=cds-WP_101457327.1;Parent=gene-CYJ03_RS05780;Dbxref=GenBank:WP_101457327.1;Name=WP_101457327.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=CYJ03_RS05780;product=5-oxoprolinase subunit C family protein;protein_id=WP_101457327.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	38424	40361	.	+	.	ID=gene-CYJ03_RS05785;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=CYJ03_RS05785;old_locus_tag=CYJ03_005775
NZ_PJUP02000012.1	Protein Homology	CDS	38424	40361	.	+	0	ID=cds-WP_101457815.1;Parent=gene-CYJ03_RS05785;Dbxref=GenBank:WP_101457815.1;Name=WP_101457815.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834931.1;locus_tag=CYJ03_RS05785;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_101457815.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	pseudogene	40476	40858	.	+	.	ID=gene-CYJ03_RS12935;Name=CYJ03_RS12935;end_range=40858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12935;partial=true;pseudo=true;start_range=.,40476
NZ_PJUP02000012.1	Protein Homology	CDS	40476	40858	.	+	0	ID=cds-CYJ03_RS12935;Parent=gene-CYJ03_RS12935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=40858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=CYJ03_RS12935;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,40476;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	41957	43246	.	+	.	ID=gene-CYJ03_RS05795;Name=CYJ03_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05795;old_locus_tag=CYJ03_005785
NZ_PJUP02000012.1	Protein Homology	CDS	41957	43246	.	+	0	ID=cds-WP_101457365.1;Parent=gene-CYJ03_RS05795;Dbxref=GenBank:WP_101457365.1;Name=WP_101457365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=CYJ03_RS05795;product=glycosyltransferase;protein_id=WP_101457365.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	43318	43626	.	+	.	ID=gene-CYJ03_RS05800;Name=CYJ03_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05800;old_locus_tag=CYJ03_005790
NZ_PJUP02000012.1	Protein Homology	CDS	43318	43626	.	+	0	ID=cds-WP_049770161.1;Parent=gene-CYJ03_RS05800;Dbxref=GenBank:WP_049770161.1;Name=WP_049770161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024424.7;locus_tag=CYJ03_RS05800;product=DUF3884 family protein;protein_id=WP_049770161.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	43698	43880	.	+	.	ID=gene-CYJ03_RS05805;Name=CYJ03_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05805;old_locus_tag=CYJ03_005795
NZ_PJUP02000012.1	GeneMarkS-2+	CDS	43698	43880	.	+	0	ID=cds-WP_037543780.1;Parent=gene-CYJ03_RS05805;Dbxref=GenBank:WP_037543780.1;Name=WP_037543780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS05805;product=hypothetical protein;protein_id=WP_037543780.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	44005	46155	.	+	.	ID=gene-CYJ03_RS05810;Name=CYJ03_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05810;old_locus_tag=CYJ03_005800
NZ_PJUP02000012.1	Protein Homology	CDS	44005	46155	.	+	0	ID=cds-WP_104052223.1;Parent=gene-CYJ03_RS05810;Dbxref=GenBank:WP_104052223.1;Name=WP_104052223.1;Ontology_term=GO:0043213,GO:0008234,GO:0043214,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,ABC-type bacteriocin transporter activity|0043214||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728741.1;locus_tag=CYJ03_RS05810;product=peptide cleavage/export ABC transporter;protein_id=WP_104052223.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	46412	47227	.	-	.	ID=gene-CYJ03_RS05815;Name=CYJ03_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05815;old_locus_tag=CYJ03_005805
NZ_PJUP02000012.1	Protein Homology	CDS	46412	47227	.	-	0	ID=cds-WP_104052224.1;Parent=gene-CYJ03_RS05815;Dbxref=GenBank:WP_104052224.1;Name=WP_104052224.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168536.1;locus_tag=CYJ03_RS05815;product=ZIP family metal transporter;protein_id=WP_104052224.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	47339	49216	.	+	.	ID=gene-CYJ03_RS05820;Name=CYJ03_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05820;old_locus_tag=CYJ03_005810
NZ_PJUP02000012.1	Protein Homology	CDS	47339	49216	.	+	0	ID=cds-WP_104052225.1;Parent=gene-CYJ03_RS05820;Dbxref=GenBank:WP_104052225.1;Name=WP_104052225.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=CYJ03_RS05820;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_104052225.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	49226	51007	.	+	.	ID=gene-CYJ03_RS05825;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS05825;old_locus_tag=CYJ03_005815
NZ_PJUP02000012.1	Protein Homology	CDS	49226	51007	.	+	0	ID=cds-WP_015728744.1;Parent=gene-CYJ03_RS05825;Dbxref=GenBank:WP_015728744.1;Name=WP_015728744.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=CYJ03_RS05825;product=DNA helicase RecQ;protein_id=WP_015728744.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	51246	52205	.	+	.	ID=gene-CYJ03_RS05830;Name=CYJ03_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05830;old_locus_tag=CYJ03_005820
NZ_PJUP02000012.1	Protein Homology	CDS	51246	52205	.	+	0	ID=cds-WP_014614538.1;Parent=gene-CYJ03_RS05830;Dbxref=GenBank:WP_014614538.1;Name=WP_014614538.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219830.1;locus_tag=CYJ03_RS05830;product=ABC transporter ATP-binding protein;protein_id=WP_014614538.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	52202	53719	.	+	.	ID=gene-CYJ03_RS05835;Name=CYJ03_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05835;old_locus_tag=CYJ03_005825
NZ_PJUP02000012.1	Protein Homology	CDS	52202	53719	.	+	0	ID=cds-WP_104052226.1;Parent=gene-CYJ03_RS05835;Dbxref=GenBank:WP_104052226.1;Name=WP_104052226.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614537.1;locus_tag=CYJ03_RS05835;product=ABC transporter permease/substrate-binding protein;protein_id=WP_104052226.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	54044	55093	.	+	.	ID=gene-CYJ03_RS05840;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CYJ03_RS05840;old_locus_tag=CYJ03_005830
NZ_PJUP02000012.1	Protein Homology	CDS	54044	55093	.	+	0	ID=cds-WP_015728746.1;Parent=gene-CYJ03_RS05840;Dbxref=GenBank:WP_015728746.1;Name=WP_015728746.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=CYJ03_RS05840;product=histidinol-phosphate transaminase;protein_id=WP_015728746.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	55194	55730	.	+	.	ID=gene-CYJ03_RS05845;Name=CYJ03_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05845;old_locus_tag=CYJ03_005835
NZ_PJUP02000012.1	Protein Homology	CDS	55194	55730	.	+	0	ID=cds-WP_104052227.1;Parent=gene-CYJ03_RS05845;Dbxref=GenBank:WP_104052227.1;Name=WP_104052227.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168530.1;locus_tag=CYJ03_RS05845;product=5' nucleotidase%2C NT5C type;protein_id=WP_104052227.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	55815	56747	.	-	.	ID=gene-CYJ03_RS05850;Name=CYJ03_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05850;old_locus_tag=CYJ03_005840
NZ_PJUP02000012.1	Protein Homology	CDS	55815	56747	.	-	0	ID=cds-WP_104052228.1;Parent=gene-CYJ03_RS05850;Dbxref=GenBank:WP_104052228.1;Name=WP_104052228.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=CYJ03_RS05850;product=diacylglycerol/lipid kinase family protein;protein_id=WP_104052228.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	56882	58384	.	-	.	ID=gene-CYJ03_RS05855;Name=CYJ03_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05855;old_locus_tag=CYJ03_005845
NZ_PJUP02000012.1	Protein Homology	CDS	56882	58384	.	-	0	ID=cds-WP_014614533.1;Parent=gene-CYJ03_RS05855;Dbxref=GenBank:WP_014614533.1;Name=WP_014614533.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614533.1;locus_tag=CYJ03_RS05855;product=peptide MFS transporter;protein_id=WP_014614533.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	58736	60241	.	-	.	ID=gene-CYJ03_RS05860;Name=CYJ03_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05860;old_locus_tag=CYJ03_005850
NZ_PJUP02000012.1	Protein Homology	CDS	58736	60241	.	-	0	ID=cds-WP_014614532.1;Parent=gene-CYJ03_RS05860;Dbxref=GenBank:WP_014614532.1;Name=WP_014614532.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=CYJ03_RS05860;product=peptide MFS transporter;protein_id=WP_014614532.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	60715	61956	.	+	.	ID=gene-CYJ03_RS05865;Name=CYJ03_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05865;old_locus_tag=CYJ03_005855
NZ_PJUP02000012.1	Protein Homology	CDS	60715	61956	.	+	0	ID=cds-WP_181137780.1;Parent=gene-CYJ03_RS05865;Dbxref=GenBank:WP_181137780.1;Name=WP_181137780.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ03_RS05865;product=MFS transporter;protein_id=WP_181137780.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	61956	62450	.	+	.	ID=gene-CYJ03_RS05870;Name=CYJ03_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05870;old_locus_tag=CYJ03_005860
NZ_PJUP02000012.1	Protein Homology	CDS	61956	62450	.	+	0	ID=cds-WP_101457370.1;Parent=gene-CYJ03_RS05870;Dbxref=GenBank:WP_101457370.1;Name=WP_101457370.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=CYJ03_RS05870;product=GNAT family N-acetyltransferase;protein_id=WP_101457370.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	62772	63272	.	-	.	ID=gene-CYJ03_RS05875;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CYJ03_RS05875;old_locus_tag=CYJ03_005865
NZ_PJUP02000012.1	Protein Homology	CDS	62772	63272	.	-	0	ID=cds-WP_015728751.1;Parent=gene-CYJ03_RS05875;Dbxref=GenBank:WP_015728751.1;Name=WP_015728751.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CYJ03_RS05875;product=preQ(1) synthase;protein_id=WP_015728751.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	63292	64173	.	-	.	ID=gene-CYJ03_RS05880;Name=CYJ03_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05880;old_locus_tag=CYJ03_005870
NZ_PJUP02000012.1	Protein Homology	CDS	63292	64173	.	-	0	ID=cds-WP_014614525.1;Parent=gene-CYJ03_RS05880;Dbxref=GenBank:WP_014614525.1;Name=WP_014614525.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614525.1;locus_tag=CYJ03_RS05880;product=DMT family transporter;protein_id=WP_014614525.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	64798	65196	.	+	.	ID=gene-CYJ03_RS05885;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CYJ03_RS05885;old_locus_tag=CYJ03_005875
NZ_PJUP02000012.1	Protein Homology	CDS	64798	65196	.	+	0	ID=cds-WP_014614524.1;Parent=gene-CYJ03_RS05885;Dbxref=GenBank:WP_014614524.1;Name=WP_014614524.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CYJ03_RS05885;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_014614524.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	65159	67264	.	+	.	ID=gene-CYJ03_RS05890;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CYJ03_RS05890;old_locus_tag=CYJ03_005880
NZ_PJUP02000012.1	Protein Homology	CDS	65159	67264	.	+	0	ID=cds-WP_014614523.1;Parent=gene-CYJ03_RS05890;Dbxref=GenBank:WP_014614523.1;Name=WP_014614523.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=CYJ03_RS05890;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014614523.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	67492	68454	.	+	.	ID=gene-CYJ03_RS05895;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CYJ03_RS05895;old_locus_tag=CYJ03_005885
NZ_PJUP02000012.1	Protein Homology	CDS	67492	68454	.	+	0	ID=cds-WP_014614522.1;Parent=gene-CYJ03_RS05895;Dbxref=GenBank:WP_014614522.1;Name=WP_014614522.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166133.1;locus_tag=CYJ03_RS05895;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_014614522.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	68835	69149	.	-	.	ID=gene-CYJ03_RS05905;Name=CYJ03_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05905;old_locus_tag=CYJ03_005895
NZ_PJUP02000012.1	Protein Homology	CDS	68835	69149	.	-	0	ID=cds-WP_014614521.1;Parent=gene-CYJ03_RS05905;Dbxref=GenBank:WP_014614521.1;Name=WP_014614521.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614521.1;locus_tag=CYJ03_RS05905;product=CHY zinc finger protein;protein_id=WP_014614521.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	69174	70103	.	-	.	ID=gene-CYJ03_RS05910;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05910;old_locus_tag=CYJ03_005900
NZ_PJUP02000012.1	Protein Homology	CDS	69174	70103	.	-	0	ID=cds-WP_199799291.1;Parent=gene-CYJ03_RS05910;Dbxref=GenBank:WP_199799291.1;Name=WP_199799291.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219843.1;locus_tag=CYJ03_RS05910;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_199799291.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	70248	70766	.	-	.	ID=gene-CYJ03_RS05915;Name=CYJ03_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05915;old_locus_tag=CYJ03_005905
NZ_PJUP02000012.1	Protein Homology	CDS	70248	70766	.	-	0	ID=cds-WP_101457372.1;Parent=gene-CYJ03_RS05915;Dbxref=GenBank:WP_101457372.1;Name=WP_101457372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168519.1;locus_tag=CYJ03_RS05915;product=GrpB family protein;protein_id=WP_101457372.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	70877	71770	.	+	.	ID=gene-CYJ03_RS05920;Name=CYJ03_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05920;old_locus_tag=CYJ03_005910
NZ_PJUP02000012.1	Protein Homology	CDS	70877	71770	.	+	0	ID=cds-WP_104052230.1;Parent=gene-CYJ03_RS05920;Dbxref=GenBank:WP_104052230.1;Name=WP_104052230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614518.1;locus_tag=CYJ03_RS05920;product=EMYY motif lipoprotein;protein_id=WP_104052230.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	71935	72255	.	+	.	ID=gene-CYJ03_RS05925;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS05925;old_locus_tag=CYJ03_005915
NZ_PJUP02000012.1	Protein Homology	CDS	71935	72255	.	+	0	ID=cds-WP_096548096.1;Parent=gene-CYJ03_RS05925;Dbxref=GenBank:WP_096548096.1;Name=WP_096548096.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=CYJ03_RS05925;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_096548096.1;transl_table=11
NZ_PJUP02000012.1	RefSeq	gene	72610	73725	.	+	.	ID=gene-CYJ03_RS05930;Name=CYJ03_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05930;old_locus_tag=CYJ03_005920
NZ_PJUP02000012.1	Protein Homology	CDS	72610	73725	.	+	0	ID=cds-WP_101457374.1;Parent=gene-CYJ03_RS05930;Dbxref=GenBank:WP_101457374.1;Name=WP_101457374.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166128.1;locus_tag=CYJ03_RS05930;product=glycerate kinase;protein_id=WP_101457374.1;transl_table=11
##sequence-region NZ_PJUP02000013.1 1 72361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000013.1	RefSeq	region	1	72361	.	+	.	ID=NZ_PJUP02000013.1:1..72361;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000013.1	RefSeq	gene	509	1240	.	+	.	ID=gene-CYJ03_RS05945;Name=CYJ03_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05945;old_locus_tag=CYJ03_005935
NZ_PJUP02000013.1	Protein Homology	CDS	509	1240	.	+	0	ID=cds-WP_014613148.1;Parent=gene-CYJ03_RS05945;Dbxref=GenBank:WP_014613148.1;Name=WP_014613148.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613148.1;locus_tag=CYJ03_RS05945;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_014613148.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	1294	1995	.	-	.	ID=gene-CYJ03_RS05950;Name=CYJ03_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05950;old_locus_tag=CYJ03_005940
NZ_PJUP02000013.1	Protein Homology	CDS	1294	1995	.	-	0	ID=cds-WP_015729550.1;Parent=gene-CYJ03_RS05950;Dbxref=GenBank:WP_015729550.1;Name=WP_015729550.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=CYJ03_RS05950;product=helix-turn-helix transcriptional regulator;protein_id=WP_015729550.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	2448	3242	.	+	.	ID=gene-CYJ03_RS05955;Name=CYJ03_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05955;old_locus_tag=CYJ03_005945
NZ_PJUP02000013.1	Protein Homology	CDS	2448	3242	.	+	0	ID=cds-WP_065520375.1;Parent=gene-CYJ03_RS05955;Dbxref=GenBank:WP_065520375.1;Name=WP_065520375.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613150.1;locus_tag=CYJ03_RS05955;product=inositol monophosphatase family protein;protein_id=WP_065520375.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	3370	4323	.	+	.	ID=gene-CYJ03_RS05960;Name=CYJ03_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05960;old_locus_tag=CYJ03_005950
NZ_PJUP02000013.1	Protein Homology	CDS	3370	4323	.	+	0	ID=cds-WP_014613151.1;Parent=gene-CYJ03_RS05960;Dbxref=GenBank:WP_014613151.1;Name=WP_014613151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613151.1;locus_tag=CYJ03_RS05960;product=LCP family glycopolymer transferase;protein_id=WP_014613151.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	4553	5260	.	+	.	ID=gene-CYJ03_RS05965;Name=CYJ03_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05965;old_locus_tag=CYJ03_005955
NZ_PJUP02000013.1	Protein Homology	CDS	4553	5260	.	+	0	ID=cds-WP_065520377.1;Parent=gene-CYJ03_RS05965;Dbxref=GenBank:WP_065520377.1;Name=WP_065520377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729548.1;locus_tag=CYJ03_RS05965;product=DUF969 domain-containing protein;protein_id=WP_065520377.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	5241	6167	.	+	.	ID=gene-CYJ03_RS05970;Name=CYJ03_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05970;old_locus_tag=CYJ03_005960
NZ_PJUP02000013.1	Protein Homology	CDS	5241	6167	.	+	0	ID=cds-WP_015729547.1;Parent=gene-CYJ03_RS05970;Dbxref=GenBank:WP_015729547.1;Name=WP_015729547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167169.1;locus_tag=CYJ03_RS05970;product=DUF979 domain-containing protein;protein_id=WP_015729547.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	6192	6833	.	+	.	ID=gene-CYJ03_RS05975;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CYJ03_RS05975;old_locus_tag=CYJ03_005965
NZ_PJUP02000013.1	Protein Homology	CDS	6192	6833	.	+	0	ID=cds-WP_104052233.1;Parent=gene-CYJ03_RS05975;Dbxref=GenBank:WP_104052233.1;Name=WP_104052233.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=CYJ03_RS05975;product=pyroglutamyl-peptidase I;protein_id=WP_104052233.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	7030	9966	.	+	.	ID=gene-CYJ03_RS05980;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CYJ03_RS05980;old_locus_tag=CYJ03_005970
NZ_PJUP02000013.1	Protein Homology	CDS	7030	9966	.	+	0	ID=cds-WP_104052234.1;Parent=gene-CYJ03_RS05980;Dbxref=GenBank:WP_104052234.1;Name=WP_104052234.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=CYJ03_RS05980;product=formate dehydrogenase subunit alpha;protein_id=WP_104052234.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	9966	10433	.	+	.	ID=gene-CYJ03_RS05985;Name=CYJ03_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05985;old_locus_tag=CYJ03_005975
NZ_PJUP02000013.1	Protein Homology	CDS	9966	10433	.	+	0	ID=cds-WP_015729545.1;Parent=gene-CYJ03_RS05985;Dbxref=GenBank:WP_015729545.1;Name=WP_015729545.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729545.1;locus_tag=CYJ03_RS05985;product=helical membrane plugin domain-containing protein;protein_id=WP_015729545.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	11178	11420	.	+	.	ID=gene-CYJ03_RS05990;Name=CYJ03_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05990;old_locus_tag=CYJ03_005980
NZ_PJUP02000013.1	Protein Homology	CDS	11178	11420	.	+	0	ID=cds-WP_015729544.1;Parent=gene-CYJ03_RS05990;Dbxref=GenBank:WP_015729544.1;Name=WP_015729544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=CYJ03_RS05990;product=hypothetical protein;protein_id=WP_015729544.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	11448	12227	.	+	.	ID=gene-CYJ03_RS05995;Name=CYJ03_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05995;old_locus_tag=CYJ03_005985
NZ_PJUP02000013.1	Protein Homology	CDS	11448	12227	.	+	0	ID=cds-WP_015729543.1;Parent=gene-CYJ03_RS05995;Dbxref=GenBank:WP_015729543.1;Name=WP_015729543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729543.1;locus_tag=CYJ03_RS05995;product=N-acetylglucosaminidase;protein_id=WP_015729543.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	12247	13374	.	+	.	ID=gene-CYJ03_RS06000;Name=CYJ03_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06000;old_locus_tag=CYJ03_005990
NZ_PJUP02000013.1	Protein Homology	CDS	12247	13374	.	+	0	ID=cds-WP_014613158.1;Parent=gene-CYJ03_RS06000;Dbxref=GenBank:WP_014613158.1;Name=WP_014613158.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=CYJ03_RS06000;product=FAD-dependent monooxygenase;protein_id=WP_014613158.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	13575	14537	.	-	.	ID=gene-CYJ03_RS06005;Name=CYJ03_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06005;old_locus_tag=CYJ03_005995
NZ_PJUP02000013.1	Protein Homology	CDS	13575	14537	.	-	0	ID=cds-WP_014613159.1;Parent=gene-CYJ03_RS06005;Dbxref=GenBank:WP_014613159.1;Name=WP_014613159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613159.1;locus_tag=CYJ03_RS06005;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_014613159.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	14601	14915	.	-	.	ID=gene-CYJ03_RS06010;Name=CYJ03_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06010;old_locus_tag=CYJ03_006000
NZ_PJUP02000013.1	Protein Homology	CDS	14601	14915	.	-	0	ID=cds-WP_014613160.1;Parent=gene-CYJ03_RS06010;Dbxref=GenBank:WP_014613160.1;Name=WP_014613160.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219772.1;locus_tag=CYJ03_RS06010;product=DMT family transporter;protein_id=WP_014613160.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	14912	15238	.	-	.	ID=gene-CYJ03_RS06015;Name=CYJ03_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06015;old_locus_tag=CYJ03_006005
NZ_PJUP02000013.1	Protein Homology	CDS	14912	15238	.	-	0	ID=cds-WP_014613161.1;Parent=gene-CYJ03_RS06015;Dbxref=GenBank:WP_014613161.1;Name=WP_014613161.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613161.1;locus_tag=CYJ03_RS06015;product=DMT family transporter;protein_id=WP_014613161.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	15556	16134	.	-	.	ID=gene-CYJ03_RS06020;Name=CYJ03_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06020;old_locus_tag=CYJ03_006010
NZ_PJUP02000013.1	Protein Homology	CDS	15556	16134	.	-	0	ID=cds-WP_014613162.1;Parent=gene-CYJ03_RS06020;Dbxref=GenBank:WP_014613162.1;Name=WP_014613162.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=CYJ03_RS06020;product=CHAP domain-containing protein;protein_id=WP_014613162.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	16805	17881	.	+	.	ID=gene-CYJ03_RS06025;Name=CYJ03_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06025;old_locus_tag=CYJ03_006015
NZ_PJUP02000013.1	Protein Homology	CDS	16805	17881	.	+	0	ID=cds-WP_014613163.1;Parent=gene-CYJ03_RS06025;Dbxref=GenBank:WP_014613163.1;Name=WP_014613163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=CYJ03_RS06025;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_014613163.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	17907	19304	.	+	.	ID=gene-CYJ03_RS06030;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06030;old_locus_tag=CYJ03_006020
NZ_PJUP02000013.1	Protein Homology	CDS	17907	19304	.	+	0	ID=cds-WP_104052235.1;Parent=gene-CYJ03_RS06030;Dbxref=GenBank:WP_104052235.1;Name=WP_104052235.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165365.1;locus_tag=CYJ03_RS06030;product=Na+/H+ antiporter NhaC;protein_id=WP_104052235.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	19576	20052	.	+	.	ID=gene-CYJ03_RS06035;Name=CYJ03_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06035;old_locus_tag=CYJ03_006025
NZ_PJUP02000013.1	Protein Homology	CDS	19576	20052	.	+	0	ID=cds-WP_104052236.1;Parent=gene-CYJ03_RS06035;Dbxref=GenBank:WP_104052236.1;Name=WP_104052236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=CYJ03_RS06035;product=hypothetical protein;protein_id=WP_104052236.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	20216	20944	.	-	.	ID=gene-CYJ03_RS06040;Name=CYJ03_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06040;old_locus_tag=CYJ03_006030
NZ_PJUP02000013.1	Protein Homology	CDS	20216	20944	.	-	0	ID=cds-WP_015729537.1;Parent=gene-CYJ03_RS06040;Dbxref=GenBank:WP_015729537.1;Name=WP_015729537.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729537.1;locus_tag=CYJ03_RS06040;product=CHAP domain-containing protein;protein_id=WP_015729537.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	21649	22701	.	+	.	ID=gene-CYJ03_RS06045;Name=CYJ03_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06045;old_locus_tag=CYJ03_006035
NZ_PJUP02000013.1	Protein Homology	CDS	21649	22701	.	+	0	ID=cds-WP_014613167.1;Parent=gene-CYJ03_RS06045;Dbxref=GenBank:WP_014613167.1;Name=WP_014613167.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=CYJ03_RS06045;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613167.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	22715	23068	.	+	.	ID=gene-CYJ03_RS06050;Name=CYJ03_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06050;old_locus_tag=CYJ03_006040
NZ_PJUP02000013.1	Protein Homology	CDS	22715	23068	.	+	0	ID=cds-WP_014613168.1;Parent=gene-CYJ03_RS06050;Dbxref=GenBank:WP_014613168.1;Name=WP_014613168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=CYJ03_RS06050;product=DoxX family protein;protein_id=WP_014613168.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	23531	23878	.	+	.	ID=gene-CYJ03_RS06055;Name=CYJ03_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06055;old_locus_tag=CYJ03_006045
NZ_PJUP02000013.1	Protein Homology	CDS	23531	23878	.	+	0	ID=cds-WP_014613169.1;Parent=gene-CYJ03_RS06055;Dbxref=GenBank:WP_014613169.1;Name=WP_014613169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=CYJ03_RS06055;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613169.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	24316	25476	.	+	.	ID=gene-CYJ03_RS06060;Name=CYJ03_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06060;old_locus_tag=CYJ03_006050
NZ_PJUP02000013.1	Protein Homology	CDS	24316	25476	.	+	0	ID=cds-WP_101485136.1;Parent=gene-CYJ03_RS06060;Dbxref=GenBank:WP_101485136.1;Name=WP_101485136.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166578.1;locus_tag=CYJ03_RS06060;product=acyl-CoA dehydrogenase family protein;protein_id=WP_101485136.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	25600	25977	.	+	.	ID=gene-CYJ03_RS06065;Name=CYJ03_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06065;old_locus_tag=CYJ03_006055
NZ_PJUP02000013.1	Protein Homology	CDS	25600	25977	.	+	0	ID=cds-WP_104052237.1;Parent=gene-CYJ03_RS06065;Dbxref=GenBank:WP_104052237.1;Name=WP_104052237.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=CYJ03_RS06065;product=YbaN family protein;protein_id=WP_104052237.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	26247	27170	.	+	.	ID=gene-CYJ03_RS06070;Name=CYJ03_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06070;old_locus_tag=CYJ03_006060
NZ_PJUP02000013.1	Protein Homology	CDS	26247	27170	.	+	0	ID=cds-WP_104052238.1;Parent=gene-CYJ03_RS06070;Dbxref=GenBank:WP_104052238.1;Name=WP_104052238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729535.1;locus_tag=CYJ03_RS06070;product=ABC transporter substrate-binding protein;protein_id=WP_104052238.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	27815	29341	.	-	.	ID=gene-CYJ03_RS06075;Name=CYJ03_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06075;old_locus_tag=CYJ03_006065
NZ_PJUP02000013.1	Protein Homology	CDS	27815	29341	.	-	0	ID=cds-WP_014613174.1;Parent=gene-CYJ03_RS06075;Dbxref=GenBank:WP_014613174.1;Name=WP_014613174.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220283.1;locus_tag=CYJ03_RS06075;product=sodium:solute symporter family protein;protein_id=WP_014613174.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	29483	30364	.	-	.	ID=gene-CYJ03_RS06080;Name=CYJ03_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06080;old_locus_tag=CYJ03_006070
NZ_PJUP02000013.1	Protein Homology	CDS	29483	30364	.	-	0	ID=cds-WP_014613175.1;Parent=gene-CYJ03_RS06080;Dbxref=GenBank:WP_014613175.1;Name=WP_014613175.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498885.1;locus_tag=CYJ03_RS06080;product=N-acetylneuraminate lyase;protein_id=WP_014613175.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	30522	31193	.	+	.	ID=gene-CYJ03_RS06085;Name=CYJ03_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06085;old_locus_tag=CYJ03_006075
NZ_PJUP02000013.1	Protein Homology	CDS	30522	31193	.	+	0	ID=cds-WP_014613176.1;Parent=gene-CYJ03_RS06085;Dbxref=GenBank:WP_014613176.1;Name=WP_014613176.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166584.1;locus_tag=CYJ03_RS06085;product=FadR/GntR family transcriptional regulator;protein_id=WP_014613176.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	31174	32037	.	+	.	ID=gene-CYJ03_RS06090;Name=CYJ03_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06090;old_locus_tag=CYJ03_006080
NZ_PJUP02000013.1	Protein Homology	CDS	31174	32037	.	+	0	ID=cds-WP_104052239.1;Parent=gene-CYJ03_RS06090;Dbxref=GenBank:WP_104052239.1;Name=WP_104052239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613177.1;locus_tag=CYJ03_RS06090;product=ROK family protein;protein_id=WP_104052239.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	32118	32678	.	+	.	ID=gene-CYJ03_RS06095;Name=CYJ03_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06095;old_locus_tag=CYJ03_006085
NZ_PJUP02000013.1	Protein Homology	CDS	32118	32678	.	+	0	ID=cds-WP_015729532.1;Parent=gene-CYJ03_RS06095;Dbxref=GenBank:WP_015729532.1;Name=WP_015729532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=CYJ03_RS06095;product=biotin transporter BioY;protein_id=WP_015729532.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	32701	33474	.	+	.	ID=gene-CYJ03_RS06100;Name=CYJ03_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06100;old_locus_tag=CYJ03_006090
NZ_PJUP02000013.1	Protein Homology	CDS	32701	33474	.	+	0	ID=cds-WP_015729531.1;Parent=gene-CYJ03_RS06100;Dbxref=GenBank:WP_015729531.1;Name=WP_015729531.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729531.1;locus_tag=CYJ03_RS06100;product=GNAT family N-acetyltransferase;protein_id=WP_015729531.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	33552	34349	.	-	.	ID=gene-CYJ03_RS06105;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06105;old_locus_tag=CYJ03_006095
NZ_PJUP02000013.1	Protein Homology	CDS	33552	34349	.	-	0	ID=cds-WP_015729530.1;Parent=gene-CYJ03_RS06105;Dbxref=GenBank:WP_015729530.1;Name=WP_015729530.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729530.1;locus_tag=CYJ03_RS06105;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_015729530.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	34508	35542	.	+	.	ID=gene-CYJ03_RS06110;Name=CYJ03_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06110;old_locus_tag=CYJ03_006100
NZ_PJUP02000013.1	Protein Homology	CDS	34508	35542	.	+	0	ID=cds-WP_020220286.1;Parent=gene-CYJ03_RS06110;Dbxref=GenBank:WP_020220286.1;Name=WP_020220286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220286.1;locus_tag=CYJ03_RS06110;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220286.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	35585	36751	.	+	.	ID=gene-CYJ03_RS06115;Name=CYJ03_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06115;old_locus_tag=CYJ03_006105
NZ_PJUP02000013.1	Protein Homology	CDS	35585	36751	.	+	0	ID=cds-WP_015729528.1;Parent=gene-CYJ03_RS06115;Dbxref=GenBank:WP_015729528.1;Name=WP_015729528.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729528.1;locus_tag=CYJ03_RS06115;product=galactokinase;protein_id=WP_015729528.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	36767	37759	.	+	.	ID=gene-CYJ03_RS06120;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CYJ03_RS06120;old_locus_tag=CYJ03_006110
NZ_PJUP02000013.1	Protein Homology	CDS	36767	37759	.	+	0	ID=cds-WP_015729527.1;Parent=gene-CYJ03_RS06120;Dbxref=GenBank:WP_015729527.1;Name=WP_015729527.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613183.1;locus_tag=CYJ03_RS06120;product=UDP-glucose 4-epimerase GalE;protein_id=WP_015729527.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	37772	39271	.	+	.	ID=gene-CYJ03_RS06125;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CYJ03_RS06125;old_locus_tag=CYJ03_006115
NZ_PJUP02000013.1	Protein Homology	CDS	37772	39271	.	+	0	ID=cds-WP_104052240.1;Parent=gene-CYJ03_RS06125;Dbxref=GenBank:WP_104052240.1;Name=WP_104052240.1;Ontology_term=GO:0019388,GO:0017103,GO:0005737;gbkey=CDS;gene=galT;go_component=cytoplasm|0005737||IEA;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729526.1;locus_tag=CYJ03_RS06125;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_104052240.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	39362	40135	.	+	.	ID=gene-CYJ03_RS06130;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06130;old_locus_tag=CYJ03_006120
NZ_PJUP02000013.1	Protein Homology	CDS	39362	40135	.	+	0	ID=cds-WP_101457778.1;Parent=gene-CYJ03_RS06130;Dbxref=GenBank:WP_101457778.1;Name=WP_101457778.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=CYJ03_RS06130;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_101457778.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	40145	40816	.	+	.	ID=gene-CYJ03_RS06135;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06135;old_locus_tag=CYJ03_006125
NZ_PJUP02000013.1	Protein Homology	CDS	40145	40816	.	+	0	ID=cds-WP_037542413.1;Parent=gene-CYJ03_RS06135;Dbxref=GenBank:WP_037542413.1;Name=WP_037542413.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832420.1;locus_tag=CYJ03_RS06135;product=molybdate ABC transporter permease subunit;protein_id=WP_037542413.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	40817	41422	.	+	.	ID=gene-CYJ03_RS06140;Name=CYJ03_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06140;old_locus_tag=CYJ03_006130
NZ_PJUP02000013.1	Protein Homology	CDS	40817	41422	.	+	0	ID=cds-WP_014613187.1;Parent=gene-CYJ03_RS06140;Dbxref=GenBank:WP_014613187.1;Name=WP_014613187.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=CYJ03_RS06140;product=ATP-binding cassette domain-containing protein;protein_id=WP_014613187.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	41715	42719	.	+	.	ID=gene-CYJ03_RS06145;Name=CYJ03_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06145;old_locus_tag=CYJ03_006135
NZ_PJUP02000013.1	Protein Homology	CDS	41715	42719	.	+	0	ID=cds-WP_233519819.1;Parent=gene-CYJ03_RS06145;Dbxref=GenBank:WP_233519819.1;Name=WP_233519819.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431689.1;locus_tag=CYJ03_RS06145;product=ThiF family adenylyltransferase;protein_id=WP_233519819.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	42735	43235	.	+	.	ID=gene-CYJ03_RS06150;Name=CYJ03_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06150;old_locus_tag=CYJ03_006140
NZ_PJUP02000013.1	Protein Homology	CDS	42735	43235	.	+	0	ID=cds-WP_014613189.1;Parent=gene-CYJ03_RS06150;Dbxref=GenBank:WP_014613189.1;Name=WP_014613189.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613189.1;locus_tag=CYJ03_RS06150;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_014613189.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	43495	43980	.	-	.	ID=gene-CYJ03_RS06155;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06155;old_locus_tag=CYJ03_006145
NZ_PJUP02000013.1	Protein Homology	CDS	43495	43980	.	-	0	ID=cds-WP_014613190.1;Parent=gene-CYJ03_RS06155;Dbxref=GenBank:WP_014613190.1;Name=WP_014613190.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166598.1;locus_tag=CYJ03_RS06155;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_014613190.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	44051	45310	.	+	.	ID=gene-CYJ03_RS06160;Name=CYJ03_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06160;old_locus_tag=CYJ03_006150
NZ_PJUP02000013.1	Protein Homology	CDS	44051	45310	.	+	0	ID=cds-WP_104052241.1;Parent=gene-CYJ03_RS06160;Dbxref=GenBank:WP_104052241.1;Name=WP_104052241.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729524.1;locus_tag=CYJ03_RS06160;product=molybdopterin molybdotransferase MoeA;protein_id=WP_104052241.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	45307	45783	.	+	.	ID=gene-CYJ03_RS06165;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06165;old_locus_tag=CYJ03_006155
NZ_PJUP02000013.1	Protein Homology	CDS	45307	45783	.	+	0	ID=cds-WP_037542419.1;Parent=gene-CYJ03_RS06165;Dbxref=GenBank:WP_037542419.1;Name=WP_037542419.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613192.1;locus_tag=CYJ03_RS06165;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_037542419.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	45789	46247	.	+	.	ID=gene-CYJ03_RS06170;Name=CYJ03_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06170;old_locus_tag=CYJ03_006160
NZ_PJUP02000013.1	Protein Homology	CDS	45789	46247	.	+	0	ID=cds-WP_014613193.1;Parent=gene-CYJ03_RS06170;Dbxref=GenBank:WP_014613193.1;Name=WP_014613193.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613193.1;locus_tag=CYJ03_RS06170;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_014613193.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	46244	46477	.	+	.	ID=gene-CYJ03_RS06175;Name=CYJ03_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06175;old_locus_tag=CYJ03_006165
NZ_PJUP02000013.1	Protein Homology	CDS	46244	46477	.	+	0	ID=cds-WP_014613194.1;Parent=gene-CYJ03_RS06175;Dbxref=GenBank:WP_014613194.1;Name=WP_014613194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=CYJ03_RS06175;product=MoaD/ThiS family protein;protein_id=WP_014613194.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	46487	47092	.	+	.	ID=gene-CYJ03_RS06180;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06180;old_locus_tag=CYJ03_006170
NZ_PJUP02000013.1	Protein Homology	CDS	46487	47092	.	+	0	ID=cds-WP_014613195.1;Parent=gene-CYJ03_RS06180;Dbxref=GenBank:WP_014613195.1;Name=WP_014613195.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613195.1;locus_tag=CYJ03_RS06180;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_014613195.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	47109	48131	.	+	.	ID=gene-CYJ03_RS06185;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06185;old_locus_tag=CYJ03_006175
NZ_PJUP02000013.1	Protein Homology	CDS	47109	48131	.	+	0	ID=cds-WP_037542424.1;Parent=gene-CYJ03_RS06185;Dbxref=GenBank:WP_037542424.1;Name=WP_037542424.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CYJ03_RS06185;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_037542424.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	48208	50079	.	-	.	ID=gene-CYJ03_RS06190;Name=CYJ03_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06190;old_locus_tag=CYJ03_006180
NZ_PJUP02000013.1	Protein Homology	CDS	48208	50079	.	-	0	ID=cds-WP_101457265.1;Parent=gene-CYJ03_RS06190;Dbxref=GenBank:WP_101457265.1;Name=WP_101457265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=CYJ03_RS06190;product=DUF8508 domain-containing protein;protein_id=WP_101457265.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	50575	51021	.	-	.	ID=gene-CYJ03_RS06195;Name=CYJ03_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06195;old_locus_tag=CYJ03_006185
NZ_PJUP02000013.1	Protein Homology	CDS	50575	51021	.	-	0	ID=cds-WP_020220116.1;Parent=gene-CYJ03_RS06195;Dbxref=GenBank:WP_020220116.1;Name=WP_020220116.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220116.1;locus_tag=CYJ03_RS06195;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_020220116.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	51195	51962	.	+	.	ID=gene-CYJ03_RS06200;Name=CYJ03_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06200;old_locus_tag=CYJ03_006190
NZ_PJUP02000013.1	Protein Homology	CDS	51195	51962	.	+	0	ID=cds-WP_015729521.1;Parent=gene-CYJ03_RS06200;Dbxref=GenBank:WP_015729521.1;Name=WP_015729521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169683.1;locus_tag=CYJ03_RS06200;product=VOC family protein;protein_id=WP_015729521.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	51953	52207	.	-	.	ID=gene-CYJ03_RS06205;Name=CYJ03_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06205;old_locus_tag=CYJ03_006195
NZ_PJUP02000013.1	Protein Homology	CDS	51953	52207	.	-	0	ID=cds-WP_014613200.1;Parent=gene-CYJ03_RS06205;Dbxref=GenBank:WP_014613200.1;Name=WP_014613200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166608.1;locus_tag=CYJ03_RS06205;product=hypothetical protein;protein_id=WP_014613200.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	52324	53604	.	+	.	ID=gene-CYJ03_RS06210;Name=CYJ03_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06210;old_locus_tag=CYJ03_006200
NZ_PJUP02000013.1	Protein Homology	CDS	52324	53604	.	+	0	ID=cds-WP_104052242.1;Parent=gene-CYJ03_RS06210;Dbxref=GenBank:WP_104052242.1;Name=WP_104052242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220115.1;locus_tag=CYJ03_RS06210;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_104052242.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	53823	56975	.	+	.	ID=gene-CYJ03_RS06215;Name=CYJ03_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06215;old_locus_tag=CYJ03_006205
NZ_PJUP02000013.1	Protein Homology	CDS	53823	56975	.	+	0	ID=cds-WP_101485019.1;Parent=gene-CYJ03_RS06215;Dbxref=GenBank:WP_101485019.1;Name=WP_101485019.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=CYJ03_RS06215;product=efflux RND transporter permease subunit;protein_id=WP_101485019.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	57179	58336	.	+	.	ID=gene-CYJ03_RS06220;Name=CYJ03_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06220;old_locus_tag=CYJ03_006210
NZ_PJUP02000013.1	Protein Homology	CDS	57179	58336	.	+	0	ID=cds-WP_014613203.1;Parent=gene-CYJ03_RS06220;Dbxref=GenBank:WP_014613203.1;Name=WP_014613203.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613203.1;locus_tag=CYJ03_RS06220;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014613203.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	58476	58793	.	-	.	ID=gene-CYJ03_RS06225;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06225;old_locus_tag=CYJ03_006215
NZ_PJUP02000013.1	Protein Homology	CDS	58476	58793	.	-	0	ID=cds-WP_014613204.1;Parent=gene-CYJ03_RS06225;Dbxref=GenBank:WP_014613204.1;Name=WP_014613204.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=CYJ03_RS06225;product=membrane stabilizing protein MspA;protein_id=WP_014613204.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	58863	59033	.	-	.	ID=gene-CYJ03_RS12285;Name=CYJ03_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12285
NZ_PJUP02000013.1	Protein Homology	CDS	58863	59033	.	-	0	ID=cds-WP_014613205.1;Parent=gene-CYJ03_RS12285;Dbxref=GenBank:WP_014613205.1;Name=WP_014613205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613205.1;locus_tag=CYJ03_RS12285;product=SE1832 family protein;protein_id=WP_014613205.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	59140	60048	.	+	.	ID=gene-CYJ03_RS06230;Name=CYJ03_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06230;old_locus_tag=CYJ03_006220
NZ_PJUP02000013.1	Protein Homology	CDS	59140	60048	.	+	0	ID=cds-WP_014613206.1;Parent=gene-CYJ03_RS06230;Dbxref=GenBank:WP_014613206.1;Name=WP_014613206.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613206.1;locus_tag=CYJ03_RS06230;product=AEC family transporter;protein_id=WP_014613206.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	60130	60990	.	-	.	ID=gene-CYJ03_RS06235;Name=CYJ03_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06235;old_locus_tag=CYJ03_006225
NZ_PJUP02000013.1	Protein Homology	CDS	60130	60990	.	-	0	ID=cds-WP_014613207.1;Parent=gene-CYJ03_RS06235;Dbxref=GenBank:WP_014613207.1;Name=WP_014613207.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=CYJ03_RS06235;product=GNAT family N-acetyltransferase;protein_id=WP_014613207.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	61131	63266	.	+	.	ID=gene-CYJ03_RS06240;Name=CYJ03_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06240;old_locus_tag=CYJ03_006230
NZ_PJUP02000013.1	Protein Homology	CDS	61131	63266	.	+	0	ID=cds-WP_101485020.1;Parent=gene-CYJ03_RS06240;Dbxref=GenBank:WP_101485020.1;Name=WP_101485020.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729516.1;locus_tag=CYJ03_RS06240;product=DNA topoisomerase III;protein_id=WP_101485020.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	63387	64721	.	+	.	ID=gene-CYJ03_RS06245;Name=CYJ03_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06245;old_locus_tag=CYJ03_006235
NZ_PJUP02000013.1	Protein Homology	CDS	63387	64721	.	+	0	ID=cds-WP_014613209.1;Parent=gene-CYJ03_RS06245;Dbxref=GenBank:WP_014613209.1;Name=WP_014613209.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=CYJ03_RS06245;product=NCS2 family permease;protein_id=WP_014613209.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	64943	65128	.	+	.	ID=gene-CYJ03_RS12560;Name=CYJ03_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12560
NZ_PJUP02000013.1	GeneMarkS-2+	CDS	64943	65128	.	+	0	ID=cds-WP_250882301.1;Parent=gene-CYJ03_RS12560;Dbxref=GenBank:WP_250882301.1;Name=WP_250882301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12560;product=hypothetical protein;protein_id=WP_250882301.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	pseudogene	65115	65404	.	+	.	ID=gene-CYJ03_RS12565;Name=CYJ03_RS12565;end_range=65404,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12565;partial=true;pseudo=true;start_range=.,65115
NZ_PJUP02000013.1	Protein Homology	CDS	65115	65404	.	+	0	ID=cds-CYJ03_RS12565;Parent=gene-CYJ03_RS12565;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=65404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12565;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,65115;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	66057	66443	.	-	.	ID=gene-CYJ03_RS06260;Name=CYJ03_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06260;old_locus_tag=CYJ03_006250
NZ_PJUP02000013.1	Protein Homology	CDS	66057	66443	.	-	0	ID=cds-WP_014613210.1;Parent=gene-CYJ03_RS06260;Dbxref=GenBank:WP_014613210.1;Name=WP_014613210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729513.1;locus_tag=CYJ03_RS06260;product=hypothetical protein;protein_id=WP_014613210.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	66906	67214	.	+	.	ID=gene-CYJ03_RS06265;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06265;old_locus_tag=CYJ03_006255
NZ_PJUP02000013.1	Protein Homology	CDS	66906	67214	.	+	0	ID=cds-WP_014613211.1;Parent=gene-CYJ03_RS06265;Dbxref=GenBank:WP_014613211.1;Name=WP_014613211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CYJ03_RS06265;product=30S ribosomal protein S10;protein_id=WP_014613211.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	67242	67901	.	+	.	ID=gene-CYJ03_RS06270;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06270;old_locus_tag=CYJ03_006260
NZ_PJUP02000013.1	Protein Homology	CDS	67242	67901	.	+	0	ID=cds-WP_014613212.1;Parent=gene-CYJ03_RS06270;Dbxref=GenBank:WP_014613212.1;Name=WP_014613212.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=CYJ03_RS06270;product=50S ribosomal protein L3;protein_id=WP_014613212.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	67928	68551	.	+	.	ID=gene-CYJ03_RS06275;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06275;old_locus_tag=CYJ03_006265
NZ_PJUP02000013.1	Protein Homology	CDS	67928	68551	.	+	0	ID=cds-WP_014613213.1;Parent=gene-CYJ03_RS06275;Dbxref=GenBank:WP_014613213.1;Name=WP_014613213.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=CYJ03_RS06275;product=50S ribosomal protein L4;protein_id=WP_014613213.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	68551	68826	.	+	.	ID=gene-CYJ03_RS06280;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CYJ03_RS06280;old_locus_tag=CYJ03_006270
NZ_PJUP02000013.1	Protein Homology	CDS	68551	68826	.	+	0	ID=cds-WP_014613214.1;Parent=gene-CYJ03_RS06280;Dbxref=GenBank:WP_014613214.1;Name=WP_014613214.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CYJ03_RS06280;product=50S ribosomal protein L23;protein_id=WP_014613214.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	68858	69691	.	+	.	ID=gene-CYJ03_RS06285;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06285;old_locus_tag=CYJ03_006275
NZ_PJUP02000013.1	Protein Homology	CDS	68858	69691	.	+	0	ID=cds-WP_014613215.1;Parent=gene-CYJ03_RS06285;Dbxref=GenBank:WP_014613215.1;Name=WP_014613215.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=CYJ03_RS06285;product=50S ribosomal protein L2;protein_id=WP_014613215.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	69756	70034	.	+	.	ID=gene-CYJ03_RS06290;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CYJ03_RS06290;old_locus_tag=CYJ03_006280
NZ_PJUP02000013.1	Protein Homology	CDS	69756	70034	.	+	0	ID=cds-WP_014613216.1;Parent=gene-CYJ03_RS06290;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=CYJ03_RS06290;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	70068	70421	.	+	.	ID=gene-CYJ03_RS06295;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CYJ03_RS06295;old_locus_tag=CYJ03_006285
NZ_PJUP02000013.1	Protein Homology	CDS	70068	70421	.	+	0	ID=cds-WP_014613217.1;Parent=gene-CYJ03_RS06295;Dbxref=GenBank:WP_014613217.1;Name=WP_014613217.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CYJ03_RS06295;product=50S ribosomal protein L22;protein_id=WP_014613217.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	70445	71098	.	+	.	ID=gene-CYJ03_RS06300;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06300;old_locus_tag=CYJ03_006290
NZ_PJUP02000013.1	Protein Homology	CDS	70445	71098	.	+	0	ID=cds-WP_014613218.1;Parent=gene-CYJ03_RS06300;Dbxref=GenBank:WP_014613218.1;Name=WP_014613218.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=CYJ03_RS06300;product=30S ribosomal protein S3;protein_id=WP_014613218.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	71101	71535	.	+	.	ID=gene-CYJ03_RS06305;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CYJ03_RS06305;old_locus_tag=CYJ03_006295
NZ_PJUP02000013.1	Protein Homology	CDS	71101	71535	.	+	0	ID=cds-WP_014613219.1;Parent=gene-CYJ03_RS06305;Dbxref=GenBank:WP_014613219.1;Name=WP_014613219.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CYJ03_RS06305;product=50S ribosomal protein L16;protein_id=WP_014613219.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	71525	71734	.	+	.	ID=gene-CYJ03_RS06310;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06310;old_locus_tag=CYJ03_006300
NZ_PJUP02000013.1	Protein Homology	CDS	71525	71734	.	+	0	ID=cds-WP_014613220.1;Parent=gene-CYJ03_RS06310;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CYJ03_RS06310;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	gene	71760	72023	.	+	.	ID=gene-CYJ03_RS06315;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06315;old_locus_tag=CYJ03_006305
NZ_PJUP02000013.1	Protein Homology	CDS	71760	72023	.	+	0	ID=cds-WP_308629198.1;Parent=gene-CYJ03_RS06315;Dbxref=GenBank:WP_308629198.1;Name=WP_308629198.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003170285.1;locus_tag=CYJ03_RS06315;product=30S ribosomal protein S17;protein_id=WP_308629198.1;transl_table=11
NZ_PJUP02000013.1	RefSeq	pseudogene	72060	72158	.	+	.	ID=gene-CYJ03_RS12810;Name=CYJ03_RS12810;end_range=72158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12810;partial=true;pseudo=true;start_range=.,72060
NZ_PJUP02000013.1	Protein Homology	CDS	72060	72158	.	+	0	ID=cds-CYJ03_RS12810;Parent=gene-CYJ03_RS12810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0004252;end_range=72158,.;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500441.1;locus_tag=CYJ03_RS12810;partial=true;product=trypsin-like serine protease;pseudo=true;start_range=.,72060;transl_table=11
NZ_PJUP02000013.1	RefSeq	pseudogene	72161	72361	.	-	.	ID=gene-CYJ03_RS06320;Name=CYJ03_RS06320;end_range=72361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS06320;old_locus_tag=CYJ03_006310;partial=true;pseudo=true;start_range=.,72161
NZ_PJUP02000013.1	Protein Homology	CDS	72161	72361	.	-	0	ID=cds-CYJ03_RS06320;Parent=gene-CYJ03_RS06320;Note=negatively supercoils closed circular double-stranded DNA%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=72361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498613.1;locus_tag=CYJ03_RS06320;partial=true;product=DNA topoisomerase IV subunit B;pseudo=true;start_range=.,72161;transl_table=11
##sequence-region NZ_PJUP02000009.1 1 84587
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000009.1	RefSeq	region	1	84587	.	+	.	ID=NZ_PJUP02000009.1:1..84587;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000009.1	RefSeq	pseudogene	1	82	.	-	.	ID=gene-CYJ03_RS04410;Name=CYJ03_RS04410;end_range=82,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS04410;old_locus_tag=CYJ03_004400;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000009.1	Protein Homology	CDS	1	82	.	-	0	ID=cds-CYJ03_RS04410;Parent=gene-CYJ03_RS04410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=82,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614449.1;locus_tag=CYJ03_RS04410;partial=true;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000009.1	RefSeq	pseudogene	84	929	.	+	.	ID=gene-CYJ03_RS04415;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=CYJ03_RS04415;old_locus_tag=CYJ03_004405;partial=true;pseudo=true;start_range=.,84
NZ_PJUP02000009.1	Protein Homology	CDS	84	929	.	+	0	ID=cds-CYJ03_RS04415;Parent=gene-CYJ03_RS04415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=CYJ03_RS04415;partial=true;product=trigger factor;pseudo=true;start_range=.,84;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	1502	2764	.	+	.	ID=gene-CYJ03_RS04420;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CYJ03_RS04420;old_locus_tag=CYJ03_004410
NZ_PJUP02000009.1	Protein Homology	CDS	1502	2764	.	+	0	ID=cds-WP_014613699.1;Parent=gene-CYJ03_RS04420;Dbxref=GenBank:WP_014613699.1;Name=WP_014613699.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CYJ03_RS04420;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_014613699.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	3001	3597	.	+	.	ID=gene-CYJ03_RS04425;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04425;old_locus_tag=CYJ03_004415
NZ_PJUP02000009.1	Protein Homology	CDS	3001	3597	.	+	0	ID=cds-WP_014613700.1;Parent=gene-CYJ03_RS04425;Dbxref=GenBank:WP_014613700.1;Name=WP_014613700.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729284.1;locus_tag=CYJ03_RS04425;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014613700.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	3752	5092	.	+	.	ID=gene-CYJ03_RS04430;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04430;old_locus_tag=CYJ03_004420
NZ_PJUP02000009.1	Protein Homology	CDS	3752	5092	.	+	0	ID=cds-WP_099997429.1;Parent=gene-CYJ03_RS04430;Dbxref=GenBank:WP_099997429.1;Name=WP_099997429.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729283.1;locus_tag=CYJ03_RS04430;product=glutamyl-tRNA reductase;protein_id=WP_099997429.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	5272	5943	.	+	.	ID=gene-CYJ03_RS04435;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04435;old_locus_tag=CYJ03_004425
NZ_PJUP02000009.1	Protein Homology	CDS	5272	5943	.	+	0	ID=cds-WP_224397735.1;Parent=gene-CYJ03_RS04435;Dbxref=GenBank:WP_224397735.1;Name=WP_224397735.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729282.1;locus_tag=CYJ03_RS04435;product=cytochrome c biogenesis protein CcsA;protein_id=WP_224397735.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	5969	6898	.	+	.	ID=gene-CYJ03_RS04440;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04440;old_locus_tag=CYJ03_004430
NZ_PJUP02000009.1	Protein Homology	CDS	5969	6898	.	+	0	ID=cds-WP_037542832.1;Parent=gene-CYJ03_RS04440;Dbxref=GenBank:WP_037542832.1;Name=WP_037542832.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729281.1;locus_tag=CYJ03_RS04440;product=hydroxymethylbilane synthase;protein_id=WP_037542832.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	6902	7579	.	+	.	ID=gene-CYJ03_RS04445;Name=CYJ03_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04445;old_locus_tag=CYJ03_004435
NZ_PJUP02000009.1	Protein Homology	CDS	6902	7579	.	+	0	ID=cds-WP_015729280.1;Parent=gene-CYJ03_RS04445;Dbxref=GenBank:WP_015729280.1;Name=WP_015729280.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,obsolete protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=CYJ03_RS04445;product=uroporphyrinogen-III synthase;protein_id=WP_015729280.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	7579	8556	.	+	.	ID=gene-CYJ03_RS04450;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04450;old_locus_tag=CYJ03_004440
NZ_PJUP02000009.1	Protein Homology	CDS	7579	8556	.	+	0	ID=cds-WP_014613705.1;Parent=gene-CYJ03_RS04450;Dbxref=GenBank:WP_014613705.1;Name=WP_014613705.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=CYJ03_RS04450;product=porphobilinogen synthase;protein_id=WP_014613705.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	8572	9858	.	+	.	ID=gene-CYJ03_RS04455;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CYJ03_RS04455;old_locus_tag=CYJ03_004445
NZ_PJUP02000009.1	Protein Homology	CDS	8572	9858	.	+	0	ID=cds-WP_065520472.1;Parent=gene-CYJ03_RS04455;Dbxref=GenBank:WP_065520472.1;Name=WP_065520472.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638191.1;locus_tag=CYJ03_RS04455;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_065520472.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	10116	11198	.	+	.	ID=gene-CYJ03_RS04460;Name=CYJ03_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04460;old_locus_tag=CYJ03_004450
NZ_PJUP02000009.1	Protein Homology	CDS	10116	11198	.	+	0	ID=cds-WP_020219738.1;Parent=gene-CYJ03_RS04460;Dbxref=GenBank:WP_020219738.1;Name=WP_020219738.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219738.1;locus_tag=CYJ03_RS04460;product=AbrB family protein;protein_id=WP_020219738.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	11283	11831	.	-	.	ID=gene-CYJ03_RS04465;Name=CYJ03_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04465;old_locus_tag=CYJ03_004455
NZ_PJUP02000009.1	Protein Homology	CDS	11283	11831	.	-	0	ID=cds-WP_015729278.1;Parent=gene-CYJ03_RS04465;Dbxref=GenBank:WP_015729278.1;Name=WP_015729278.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=CYJ03_RS04465;product=DNA-3-methyladenine glycosylase I;protein_id=WP_015729278.1;transl_table=11
NZ_PJUP02000009.1	cmsearch	binding_site	11890	12112	.	+	.	ID=id-NZ_PJUP02000009.1:11890..12112;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000009.1	RefSeq	gene	12151	14781	.	+	.	ID=gene-CYJ03_RS04470;Name=CYJ03_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04470;old_locus_tag=CYJ03_004460
NZ_PJUP02000009.1	Protein Homology	CDS	12151	14781	.	+	0	ID=cds-WP_104052187.1;Parent=gene-CYJ03_RS04470;Dbxref=GenBank:WP_104052187.1;Name=WP_104052187.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=CYJ03_RS04470;product=valine--tRNA ligase;protein_id=WP_104052187.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	14793	16061	.	+	.	ID=gene-CYJ03_RS04475;Name=CYJ03_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04475;old_locus_tag=CYJ03_004465
NZ_PJUP02000009.1	Protein Homology	CDS	14793	16061	.	+	0	ID=cds-WP_014613710.1;Parent=gene-CYJ03_RS04475;Dbxref=GenBank:WP_014613710.1;Name=WP_014613710.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169487.1;locus_tag=CYJ03_RS04475;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_014613710.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	16251	16976	.	+	.	ID=gene-CYJ03_RS12805;Name=CYJ03_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12805;old_locus_tag=CYJ03_004470
NZ_PJUP02000009.1	Protein Homology	CDS	16251	16976	.	+	0	ID=cds-WP_257974241.1;Parent=gene-CYJ03_RS12805;Dbxref=GenBank:WP_257974241.1;Name=WP_257974241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=CYJ03_RS12805;product=prepilin peptidase;protein_id=WP_257974241.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	16973	17656	.	+	.	ID=gene-CYJ03_RS04485;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04485;old_locus_tag=CYJ03_004475
NZ_PJUP02000009.1	Protein Homology	CDS	16973	17656	.	+	0	ID=cds-WP_065354183.1;Parent=gene-CYJ03_RS04485;Dbxref=GenBank:WP_065354183.1;Name=WP_065354183.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=CYJ03_RS04485;product=RadC family protein;protein_id=WP_065354183.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	17896	18051	.	-	.	ID=gene-CYJ03_RS12270;Name=CYJ03_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12270
NZ_PJUP02000009.1	Protein Homology	CDS	17896	18051	.	-	0	ID=cds-WP_015729275.1;Parent=gene-CYJ03_RS12270;Dbxref=GenBank:WP_015729275.1;Name=WP_015729275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729275.1;locus_tag=CYJ03_RS12270;product=hypothetical protein;protein_id=WP_015729275.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	18221	18697	.	+	.	ID=gene-CYJ03_RS04490;Name=CYJ03_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04490;old_locus_tag=CYJ03_004480
NZ_PJUP02000009.1	Protein Homology	CDS	18221	18697	.	+	0	ID=cds-WP_020219739.1;Parent=gene-CYJ03_RS04490;Dbxref=GenBank:WP_020219739.1;Name=WP_020219739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=CYJ03_RS04490;product=DUF4930 family protein;protein_id=WP_020219739.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	18783	18923	.	+	.	ID=gene-CYJ03_RS12275;Name=CYJ03_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12275
NZ_PJUP02000009.1	Protein Homology	CDS	18783	18923	.	+	0	ID=cds-WP_015729273.1;Parent=gene-CYJ03_RS12275;Dbxref=GenBank:WP_015729273.1;Name=WP_015729273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729273.1;locus_tag=CYJ03_RS12275;product=hypothetical protein;protein_id=WP_015729273.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	19134	19970	.	+	.	ID=gene-CYJ03_RS04495;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04495;old_locus_tag=CYJ03_004485
NZ_PJUP02000009.1	Protein Homology	CDS	19134	19970	.	+	0	ID=cds-WP_015729272.1;Parent=gene-CYJ03_RS04495;Dbxref=GenBank:WP_015729272.1;Name=WP_015729272.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=CYJ03_RS04495;product=rod shape-determining protein MreC;protein_id=WP_015729272.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	19970	20485	.	+	.	ID=gene-CYJ03_RS04500;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04500;old_locus_tag=CYJ03_004490
NZ_PJUP02000009.1	Protein Homology	CDS	19970	20485	.	+	0	ID=cds-WP_015729271.1;Parent=gene-CYJ03_RS04500;Dbxref=GenBank:WP_015729271.1;Name=WP_015729271.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729271.1;locus_tag=CYJ03_RS04500;product=rod shape-determining protein MreD;protein_id=WP_015729271.1;transl_table=11
NZ_PJUP02000009.1	cmsearch	sequence_feature	20521	20594	.	+	.	ID=id-NZ_PJUP02000009.1:20521..20594;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00559,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000009.1	RefSeq	gene	20606	20914	.	+	.	ID=gene-CYJ03_RS04505;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CYJ03_RS04505;old_locus_tag=CYJ03_004495
NZ_PJUP02000009.1	Protein Homology	CDS	20606	20914	.	+	0	ID=cds-WP_014613714.1;Parent=gene-CYJ03_RS04505;Dbxref=GenBank:WP_014613714.1;Name=WP_014613714.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CYJ03_RS04505;product=50S ribosomal protein L21;protein_id=WP_014613714.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	20917	21237	.	+	.	ID=gene-CYJ03_RS04510;Name=CYJ03_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04510;old_locus_tag=CYJ03_004500
NZ_PJUP02000009.1	Protein Homology	CDS	20917	21237	.	+	0	ID=cds-WP_014613715.1;Parent=gene-CYJ03_RS04510;Dbxref=GenBank:WP_014613715.1;Name=WP_014613715.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CYJ03_RS04510;product=ribosomal-processing cysteine protease Prp;protein_id=WP_014613715.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	21248	21532	.	+	.	ID=gene-CYJ03_RS04515;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04515;old_locus_tag=CYJ03_004505
NZ_PJUP02000009.1	Protein Homology	CDS	21248	21532	.	+	0	ID=cds-WP_014613716.1;Parent=gene-CYJ03_RS04515;Dbxref=GenBank:WP_014613716.1;Name=WP_014613716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CYJ03_RS04515;product=50S ribosomal protein L27;protein_id=WP_014613716.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	21661	22953	.	+	.	ID=gene-CYJ03_RS04520;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CYJ03_RS04520;old_locus_tag=CYJ03_004510
NZ_PJUP02000009.1	Protein Homology	CDS	21661	22953	.	+	0	ID=cds-WP_037542834.1;Parent=gene-CYJ03_RS04520;Dbxref=GenBank:WP_037542834.1;Name=WP_037542834.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CYJ03_RS04520;product=GTPase ObgE;protein_id=WP_037542834.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	22981	23424	.	+	.	ID=gene-CYJ03_RS04525;Name=CYJ03_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04525;old_locus_tag=CYJ03_004515
NZ_PJUP02000009.1	Protein Homology	CDS	22981	23424	.	+	0	ID=cds-WP_014613718.1;Parent=gene-CYJ03_RS04525;Dbxref=GenBank:WP_014613718.1;Name=WP_014613718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=CYJ03_RS04525;product=ACT domain-containing protein;protein_id=WP_014613718.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	23438	24037	.	+	.	ID=gene-CYJ03_RS04530;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04530;old_locus_tag=CYJ03_004520
NZ_PJUP02000009.1	Protein Homology	CDS	23438	24037	.	+	0	ID=cds-WP_037542835.1;Parent=gene-CYJ03_RS04530;Dbxref=GenBank:WP_037542835.1;Name=WP_037542835.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=CYJ03_RS04530;product=Holliday junction branch migration protein RuvA;protein_id=WP_037542835.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	24051	25049	.	+	.	ID=gene-CYJ03_RS04535;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04535;old_locus_tag=CYJ03_004525
NZ_PJUP02000009.1	Protein Homology	CDS	24051	25049	.	+	0	ID=cds-WP_100040230.1;Parent=gene-CYJ03_RS04535;Dbxref=GenBank:WP_100040230.1;Name=WP_100040230.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=CYJ03_RS04535;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_100040230.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	25067	26092	.	+	.	ID=gene-CYJ03_RS04540;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04540;old_locus_tag=CYJ03_004530
NZ_PJUP02000009.1	Protein Homology	CDS	25067	26092	.	+	0	ID=cds-WP_037542836.1;Parent=gene-CYJ03_RS04540;Dbxref=GenBank:WP_037542836.1;Name=WP_037542836.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CYJ03_RS04540;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037542836.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	26110	27249	.	+	.	ID=gene-CYJ03_RS04545;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CYJ03_RS04545;old_locus_tag=CYJ03_004535
NZ_PJUP02000009.1	Protein Homology	CDS	26110	27249	.	+	0	ID=cds-WP_014613722.1;Parent=gene-CYJ03_RS04545;Dbxref=GenBank:WP_014613722.1;Name=WP_014613722.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CYJ03_RS04545;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_014613722.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	27266	27529	.	+	.	ID=gene-CYJ03_RS04550;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04550;old_locus_tag=CYJ03_004540
NZ_PJUP02000009.1	Protein Homology	CDS	27266	27529	.	+	0	ID=cds-WP_014613723.1;Parent=gene-CYJ03_RS04550;Dbxref=GenBank:WP_014613723.1;Name=WP_014613723.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=CYJ03_RS04550;product=preprotein translocase subunit YajC;protein_id=WP_014613723.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	27671	29950	.	+	.	ID=gene-CYJ03_RS04555;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=CYJ03_RS04555;old_locus_tag=CYJ03_004545
NZ_PJUP02000009.1	Protein Homology	CDS	27671	29950	.	+	0	ID=cds-WP_014613724.1;Parent=gene-CYJ03_RS04555;Dbxref=GenBank:WP_014613724.1;Name=WP_014613724.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491144.1;locus_tag=CYJ03_RS04555;product=protein translocase subunit SecDF;protein_id=WP_014613724.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	30067	32352	.	+	.	ID=gene-CYJ03_RS04560;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS04560;old_locus_tag=CYJ03_004550
NZ_PJUP02000009.1	Protein Homology	CDS	30067	32352	.	+	0	ID=cds-WP_037544195.1;Parent=gene-CYJ03_RS04560;Dbxref=GenBank:WP_037544195.1;Name=WP_037544195.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=CYJ03_RS04560;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_037544195.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	32364	32882	.	+	.	ID=gene-CYJ03_RS04565;Name=CYJ03_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04565;old_locus_tag=CYJ03_004555
NZ_PJUP02000009.1	Protein Homology	CDS	32364	32882	.	+	0	ID=cds-WP_014613726.1;Parent=gene-CYJ03_RS04565;Dbxref=GenBank:WP_014613726.1;Name=WP_014613726.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CYJ03_RS04565;product=adenine phosphoribosyltransferase;protein_id=WP_014613726.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	33239	35428	.	+	.	ID=gene-CYJ03_RS04570;Name=CYJ03_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04570;old_locus_tag=CYJ03_004560
NZ_PJUP02000009.1	Protein Homology	CDS	33239	35428	.	+	0	ID=cds-WP_014613727.1;Parent=gene-CYJ03_RS04570;Dbxref=GenBank:WP_014613727.1;Name=WP_014613727.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=CYJ03_RS04570;product=RelA/SpoT family protein;protein_id=WP_014613727.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	35441	35893	.	+	.	ID=gene-CYJ03_RS04575;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CYJ03_RS04575;old_locus_tag=CYJ03_004565
NZ_PJUP02000009.1	Protein Homology	CDS	35441	35893	.	+	0	ID=cds-WP_014613728.1;Parent=gene-CYJ03_RS04575;Dbxref=GenBank:WP_014613728.1;Name=WP_014613728.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302954.1;locus_tag=CYJ03_RS04575;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014613728.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	35890	36765	.	+	.	ID=gene-CYJ03_RS04580;Name=CYJ03_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04580;old_locus_tag=CYJ03_004570
NZ_PJUP02000009.1	Protein Homology	CDS	35890	36765	.	+	0	ID=cds-WP_014613729.1;Parent=gene-CYJ03_RS04580;Dbxref=GenBank:WP_014613729.1;Name=WP_014613729.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=CYJ03_RS04580;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_014613729.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	37127	38398	.	+	.	ID=gene-CYJ03_RS04585;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04585;old_locus_tag=CYJ03_004575
NZ_PJUP02000009.1	Protein Homology	CDS	37127	38398	.	+	0	ID=cds-WP_014613730.1;Parent=gene-CYJ03_RS04585;Dbxref=GenBank:WP_014613730.1;Name=WP_014613730.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=CYJ03_RS04585;product=histidine--tRNA ligase;protein_id=WP_014613730.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	38398	40164	.	+	.	ID=gene-CYJ03_RS04590;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04590;old_locus_tag=CYJ03_004580
NZ_PJUP02000009.1	Protein Homology	CDS	38398	40164	.	+	0	ID=cds-WP_014613731.1;Parent=gene-CYJ03_RS04590;Dbxref=GenBank:WP_014613731.1;Name=WP_014613731.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=CYJ03_RS04590;product=aspartate--tRNA ligase;protein_id=WP_014613731.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	40235	40427	.	+	.	ID=gene-CYJ03_RS04595;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CYJ03_RS04595;old_locus_tag=CYJ03_004585
NZ_PJUP02000009.1	cmsearch	ncRNA	40235	40427	.	+	.	ID=rna-CYJ03_RS04595;Parent=gene-CYJ03_RS04595;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS04595;product=6S RNA
NZ_PJUP02000009.1	cmsearch	exon	40235	40427	.	+	.	ID=exon-CYJ03_RS04595-1;Parent=rna-CYJ03_RS04595;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS04595;product=6S RNA
NZ_PJUP02000009.1	RefSeq	gene	40510	41277	.	+	.	ID=gene-CYJ03_RS04600;Name=CYJ03_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04600;old_locus_tag=CYJ03_004590
NZ_PJUP02000009.1	Protein Homology	CDS	40510	41277	.	+	0	ID=cds-WP_063284410.1;Parent=gene-CYJ03_RS04600;Dbxref=GenBank:WP_063284410.1;Name=WP_063284410.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=CYJ03_RS04600;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_063284410.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	41345	42616	.	-	.	ID=gene-CYJ03_RS04605;Name=CYJ03_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04605;old_locus_tag=CYJ03_004595
NZ_PJUP02000009.1	Protein Homology	CDS	41345	42616	.	-	0	ID=cds-WP_014613733.1;Parent=gene-CYJ03_RS04605;Dbxref=GenBank:WP_014613733.1;Name=WP_014613733.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165155.1;locus_tag=CYJ03_RS04605;product=replication-associated recombination protein A;protein_id=WP_014613733.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	42726	43145	.	+	.	ID=gene-CYJ03_RS04610;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=CYJ03_RS04610;old_locus_tag=CYJ03_004600
NZ_PJUP02000009.1	Protein Homology	CDS	42726	43145	.	+	0	ID=cds-WP_014613734.1;Parent=gene-CYJ03_RS04610;Dbxref=GenBank:WP_014613734.1;Name=WP_014613734.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CYJ03_RS04610;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_014613734.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	43186	44016	.	+	.	ID=gene-CYJ03_RS04615;Name=CYJ03_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04615;old_locus_tag=CYJ03_004605
NZ_PJUP02000009.1	Protein Homology	CDS	43186	44016	.	+	0	ID=cds-WP_020219746.1;Parent=gene-CYJ03_RS04615;Dbxref=GenBank:WP_020219746.1;Name=WP_020219746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=CYJ03_RS04615;product=aldo/keto reductase;protein_id=WP_020219746.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	44084	44269	.	+	.	ID=gene-CYJ03_RS04620;Name=CYJ03_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04620;old_locus_tag=CYJ03_004610
NZ_PJUP02000009.1	Protein Homology	CDS	44084	44269	.	+	0	ID=cds-WP_014613736.1;Parent=gene-CYJ03_RS04620;Dbxref=GenBank:WP_014613736.1;Name=WP_014613736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613736.1;locus_tag=CYJ03_RS04620;product=CsbD family protein;protein_id=WP_014613736.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	44734	45750	.	-	.	ID=gene-CYJ03_RS04625;Name=CYJ03_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04625;old_locus_tag=CYJ03_004615
NZ_PJUP02000009.1	Protein Homology	CDS	44734	45750	.	-	0	ID=cds-WP_014613737.1;Parent=gene-CYJ03_RS04625;Dbxref=GenBank:WP_014613737.1;Name=WP_014613737.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219747.1;locus_tag=CYJ03_RS04625;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014613737.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	45959	47104	.	+	.	ID=gene-CYJ03_RS04630;Name=CYJ03_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04630;old_locus_tag=CYJ03_004620
NZ_PJUP02000009.1	Protein Homology	CDS	45959	47104	.	+	0	ID=cds-WP_014613738.1;Parent=gene-CYJ03_RS04630;Dbxref=GenBank:WP_014613738.1;Name=WP_014613738.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613738.1;locus_tag=CYJ03_RS04630;product=cysteine desulfurase family protein;protein_id=WP_014613738.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	47104	48216	.	+	.	ID=gene-CYJ03_RS04635;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04635;old_locus_tag=CYJ03_004625
NZ_PJUP02000009.1	Protein Homology	CDS	47104	48216	.	+	0	ID=cds-WP_014613739.1;Parent=gene-CYJ03_RS04635;Dbxref=GenBank:WP_014613739.1;Name=WP_014613739.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469417.1;locus_tag=CYJ03_RS04635;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_014613739.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	48232	48906	.	+	.	ID=gene-CYJ03_RS04640;Name=CYJ03_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04640;old_locus_tag=CYJ03_004630
NZ_PJUP02000009.1	Protein Homology	CDS	48232	48906	.	+	0	ID=cds-WP_020219749.1;Parent=gene-CYJ03_RS04640;Dbxref=GenBank:WP_020219749.1;Name=WP_020219749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=CYJ03_RS04640;product=tetratricopeptide repeat protein;protein_id=WP_020219749.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	48909	51308	.	+	.	ID=gene-CYJ03_RS04645;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=CYJ03_RS04645;old_locus_tag=CYJ03_004635
NZ_PJUP02000009.1	Protein Homology	CDS	48909	51308	.	+	0	ID=cds-WP_014613741.1;Parent=gene-CYJ03_RS04645;Dbxref=GenBank:WP_014613741.1;Name=WP_014613741.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169706.1;locus_tag=CYJ03_RS04645;product=SF1B family DNA helicase RecD2;protein_id=WP_014613741.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	51554	54184	.	+	.	ID=gene-CYJ03_RS04650;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04650;old_locus_tag=CYJ03_004640
NZ_PJUP02000009.1	Protein Homology	CDS	51554	54184	.	+	0	ID=cds-WP_104052188.1;Parent=gene-CYJ03_RS04650;Dbxref=GenBank:WP_104052188.1;Name=WP_104052188.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512470.1;locus_tag=CYJ03_RS04650;product=alanine--tRNA ligase;protein_id=WP_104052188.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	54247	54519	.	+	.	ID=gene-CYJ03_RS04655;Name=CYJ03_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04655;old_locus_tag=CYJ03_004645
NZ_PJUP02000009.1	Protein Homology	CDS	54247	54519	.	+	0	ID=cds-WP_014613743.1;Parent=gene-CYJ03_RS04655;Dbxref=GenBank:WP_014613743.1;Name=WP_014613743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=CYJ03_RS04655;product=IreB family regulatory phosphoprotein;protein_id=WP_014613743.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	54512	54940	.	+	.	ID=gene-CYJ03_RS04660;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CYJ03_RS04660;old_locus_tag=CYJ03_004650
NZ_PJUP02000009.1	Protein Homology	CDS	54512	54940	.	+	0	ID=cds-WP_014613744.1;Parent=gene-CYJ03_RS04660;Dbxref=GenBank:WP_014613744.1;Name=WP_014613744.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=CYJ03_RS04660;product=Holliday junction resolvase RuvX;protein_id=WP_014613744.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	54954	55274	.	+	.	ID=gene-CYJ03_RS04665;Name=CYJ03_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04665;old_locus_tag=CYJ03_004655
NZ_PJUP02000009.1	Protein Homology	CDS	54954	55274	.	+	0	ID=cds-WP_014613745.1;Parent=gene-CYJ03_RS04665;Dbxref=GenBank:WP_014613745.1;Name=WP_014613745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=CYJ03_RS04665;product=DUF1292 domain-containing protein;protein_id=WP_014613745.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	55671	56315	.	+	.	ID=gene-CYJ03_RS04670;Name=CYJ03_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04670;old_locus_tag=CYJ03_004660
NZ_PJUP02000009.1	Protein Homology	CDS	55671	56315	.	+	0	ID=cds-WP_014613747.1;Parent=gene-CYJ03_RS04670;Dbxref=GenBank:WP_014613747.1;Name=WP_014613747.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=CYJ03_RS04670;product=O-methyltransferase;protein_id=WP_014613747.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	56308	57237	.	+	.	ID=gene-CYJ03_RS04675;Name=CYJ03_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04675;old_locus_tag=CYJ03_004665
NZ_PJUP02000009.1	Protein Homology	CDS	56308	57237	.	+	0	ID=cds-WP_104052189.1;Parent=gene-CYJ03_RS04675;Dbxref=GenBank:WP_104052189.1;Name=WP_104052189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CYJ03_RS04675;product=peptidase U32 family protein;protein_id=WP_104052189.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	57256	58521	.	+	.	ID=gene-CYJ03_RS04680;Name=CYJ03_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04680;old_locus_tag=CYJ03_004670
NZ_PJUP02000009.1	Protein Homology	CDS	57256	58521	.	+	0	ID=cds-WP_103926896.1;Parent=gene-CYJ03_RS04680;Dbxref=GenBank:WP_103926896.1;Name=WP_103926896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169713.1;locus_tag=CYJ03_RS04680;product=peptidase U32 family protein;protein_id=WP_103926896.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	58525	59148	.	+	.	ID=gene-CYJ03_RS04685;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CYJ03_RS04685;old_locus_tag=CYJ03_004675
NZ_PJUP02000009.1	Protein Homology	CDS	58525	59148	.	+	0	ID=cds-WP_014613750.1;Parent=gene-CYJ03_RS04685;Dbxref=GenBank:WP_014613750.1;Name=WP_014613750.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613750.1;locus_tag=CYJ03_RS04685;product=uridine kinase;protein_id=WP_014613750.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	59175	59651	.	+	.	ID=gene-CYJ03_RS04690;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04690;old_locus_tag=CYJ03_004680
NZ_PJUP02000009.1	Protein Homology	CDS	59175	59651	.	+	0	ID=cds-WP_014613751.1;Parent=gene-CYJ03_RS04690;Dbxref=GenBank:WP_014613751.1;Name=WP_014613751.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169715.1;locus_tag=CYJ03_RS04690;product=transcription elongation factor GreA;protein_id=WP_014613751.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	59907	60641	.	+	.	ID=gene-CYJ03_RS04695;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04695;old_locus_tag=CYJ03_004685
NZ_PJUP02000009.1	Protein Homology	CDS	59907	60641	.	+	0	ID=cds-WP_096533276.1;Parent=gene-CYJ03_RS04695;Dbxref=GenBank:WP_096533276.1;Name=WP_096533276.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=CYJ03_RS04695;product=5-oxoprolinase subunit PxpB;protein_id=WP_096533276.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	60631	61656	.	+	.	ID=gene-CYJ03_RS04700;Name=CYJ03_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04700;old_locus_tag=CYJ03_004690
NZ_PJUP02000009.1	Protein Homology	CDS	60631	61656	.	+	0	ID=cds-WP_037542841.1;Parent=gene-CYJ03_RS04700;Dbxref=GenBank:WP_037542841.1;Name=WP_037542841.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=CYJ03_RS04700;product=5-oxoprolinase subunit C family protein;protein_id=WP_037542841.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	61647	62093	.	+	.	ID=gene-CYJ03_RS04705;Name=CYJ03_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04705;old_locus_tag=CYJ03_004695
NZ_PJUP02000009.1	Protein Homology	CDS	61647	62093	.	+	0	ID=cds-WP_037542842.1;Parent=gene-CYJ03_RS04705;Dbxref=GenBank:WP_037542842.1;Name=WP_037542842.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613754.1;locus_tag=CYJ03_RS04705;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542842.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	62107	63477	.	+	.	ID=gene-CYJ03_RS04710;Name=CYJ03_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04710;old_locus_tag=CYJ03_004700
NZ_PJUP02000009.1	Protein Homology	CDS	62107	63477	.	+	0	ID=cds-WP_014613755.1;Parent=gene-CYJ03_RS04710;Dbxref=GenBank:WP_014613755.1;Name=WP_014613755.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=CYJ03_RS04710;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_014613755.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	63467	64225	.	+	.	ID=gene-CYJ03_RS04715;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04715;old_locus_tag=CYJ03_004705
NZ_PJUP02000009.1	Protein Homology	CDS	63467	64225	.	+	0	ID=cds-WP_099986532.1;Parent=gene-CYJ03_RS04715;Dbxref=GenBank:WP_099986532.1;Name=WP_099986532.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165174.1;locus_tag=CYJ03_RS04715;product=5-oxoprolinase subunit PxpA;protein_id=WP_099986532.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	64229	65467	.	+	.	ID=gene-CYJ03_RS04720;Name=CYJ03_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04720;old_locus_tag=CYJ03_004710
NZ_PJUP02000009.1	Protein Homology	CDS	64229	65467	.	+	0	ID=cds-WP_099986534.1;Parent=gene-CYJ03_RS04720;Dbxref=GenBank:WP_099986534.1;Name=WP_099986534.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169721.1;locus_tag=CYJ03_RS04720;product=NRAMP family divalent metal transporter;protein_id=WP_099986534.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	65717	66403	.	+	.	ID=gene-CYJ03_RS04725;Name=CYJ03_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04725;old_locus_tag=CYJ03_004715
NZ_PJUP02000009.1	Protein Homology	CDS	65717	66403	.	+	0	ID=cds-WP_014613758.1;Parent=gene-CYJ03_RS04725;Dbxref=GenBank:WP_014613758.1;Name=WP_014613758.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302980.1;locus_tag=CYJ03_RS04725;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_014613758.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	66476	67003	.	+	.	ID=gene-CYJ03_RS04730;Name=CYJ03_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04730;old_locus_tag=CYJ03_004720
NZ_PJUP02000009.1	Protein Homology	CDS	66476	67003	.	+	0	ID=cds-WP_014613759.1;Parent=gene-CYJ03_RS04730;Dbxref=GenBank:WP_014613759.1;Name=WP_014613759.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=CYJ03_RS04730;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_014613759.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	67004	68104	.	+	.	ID=gene-CYJ03_RS04735;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=CYJ03_RS04735;old_locus_tag=CYJ03_004725
NZ_PJUP02000009.1	Protein Homology	CDS	67004	68104	.	+	0	ID=cds-WP_014613760.1;Parent=gene-CYJ03_RS04735;Dbxref=GenBank:WP_014613760.1;Name=WP_014613760.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=CYJ03_RS04735;product=ribosome biogenesis GTPase YqeH;protein_id=WP_014613760.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	68120	68932	.	+	.	ID=gene-CYJ03_RS04740;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CYJ03_RS04740;old_locus_tag=CYJ03_004730
NZ_PJUP02000009.1	Protein Homology	CDS	68120	68932	.	+	0	ID=cds-WP_014613761.1;Parent=gene-CYJ03_RS04740;Dbxref=GenBank:WP_014613761.1;Name=WP_014613761.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219754.1;locus_tag=CYJ03_RS04740;product=shikimate dehydrogenase;protein_id=WP_014613761.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	68943	69236	.	+	.	ID=gene-CYJ03_RS04745;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CYJ03_RS04745;old_locus_tag=CYJ03_004735
NZ_PJUP02000009.1	Protein Homology	CDS	68943	69236	.	+	0	ID=cds-WP_014613762.1;Parent=gene-CYJ03_RS04745;Dbxref=GenBank:WP_014613762.1;Name=WP_014613762.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169726.1;locus_tag=CYJ03_RS04745;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_014613762.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	69239	69820	.	+	.	ID=gene-CYJ03_RS04750;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04750;old_locus_tag=CYJ03_004740
NZ_PJUP02000009.1	Protein Homology	CDS	69239	69820	.	+	0	ID=cds-WP_014613763.1;Parent=gene-CYJ03_RS04750;Dbxref=GenBank:WP_014613763.1;Name=WP_014613763.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=CYJ03_RS04750;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_014613763.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	69798	70382	.	+	.	ID=gene-CYJ03_RS04755;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=CYJ03_RS04755;old_locus_tag=CYJ03_004745
NZ_PJUP02000009.1	Protein Homology	CDS	69798	70382	.	+	0	ID=cds-WP_014613764.1;Parent=gene-CYJ03_RS04755;Dbxref=GenBank:WP_014613764.1;Name=WP_014613764.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613764.1;locus_tag=CYJ03_RS04755;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_014613764.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	70383	70739	.	+	.	ID=gene-CYJ03_RS04760;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04760;old_locus_tag=CYJ03_004750
NZ_PJUP02000009.1	Protein Homology	CDS	70383	70739	.	+	0	ID=cds-WP_014613765.1;Parent=gene-CYJ03_RS04760;Dbxref=GenBank:WP_014613765.1;Name=WP_014613765.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=CYJ03_RS04760;product=ribosome silencing factor;protein_id=WP_014613765.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	70739	71461	.	+	.	ID=gene-CYJ03_RS04765;Name=CYJ03_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04765;old_locus_tag=CYJ03_004755
NZ_PJUP02000009.1	Protein Homology	CDS	70739	71461	.	+	0	ID=cds-WP_082239519.1;Parent=gene-CYJ03_RS04765;Dbxref=GenBank:WP_082239519.1;Name=WP_082239519.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=CYJ03_RS04765;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_082239519.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	71515	72183	.	+	.	ID=gene-CYJ03_RS04770;Name=CYJ03_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04770;old_locus_tag=CYJ03_004760
NZ_PJUP02000009.1	Protein Homology	CDS	71515	72183	.	+	0	ID=cds-WP_065354195.1;Parent=gene-CYJ03_RS04770;Dbxref=GenBank:WP_065354195.1;Name=WP_065354195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613767.1;locus_tag=CYJ03_RS04770;product=helix-hairpin-helix domain-containing protein;protein_id=WP_065354195.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	72269	72730	.	+	.	ID=gene-CYJ03_RS04775;Name=CYJ03_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04775;old_locus_tag=CYJ03_004765
NZ_PJUP02000009.1	Protein Homology	CDS	72269	72730	.	+	0	ID=cds-WP_015729257.1;Parent=gene-CYJ03_RS04775;Dbxref=GenBank:WP_015729257.1;Name=WP_015729257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729257.1;locus_tag=CYJ03_RS04775;product=ComE operon protein 2;protein_id=WP_015729257.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	72838	74958	.	+	.	ID=gene-CYJ03_RS04780;Name=CYJ03_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04780;old_locus_tag=CYJ03_004770
NZ_PJUP02000009.1	Protein Homology	CDS	72838	74958	.	+	0	ID=cds-WP_238409173.1;Parent=gene-CYJ03_RS04780;Dbxref=GenBank:WP_238409173.1;Name=WP_238409173.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219756.1;locus_tag=CYJ03_RS04780;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_238409173.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	75026	76000	.	+	.	ID=gene-CYJ03_RS04785;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04785;old_locus_tag=CYJ03_004775
NZ_PJUP02000009.1	Protein Homology	CDS	75026	76000	.	+	0	ID=cds-WP_065354196.1;Parent=gene-CYJ03_RS04785;Dbxref=GenBank:WP_065354196.1;Name=WP_065354196.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729255.1;locus_tag=CYJ03_RS04785;product=DNA polymerase III subunit delta;protein_id=WP_065354196.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	76174	76422	.	-	.	ID=gene-CYJ03_RS04790;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CYJ03_RS04790;old_locus_tag=CYJ03_004780
NZ_PJUP02000009.1	Protein Homology	CDS	76174	76422	.	-	0	ID=cds-WP_014613771.1;Parent=gene-CYJ03_RS04790;Dbxref=GenBank:WP_014613771.1;Name=WP_014613771.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=CYJ03_RS04790;product=30S ribosomal protein S20;protein_id=WP_014613771.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	76745	78568	.	+	.	ID=gene-CYJ03_RS04795;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04795;old_locus_tag=CYJ03_004785
NZ_PJUP02000009.1	Protein Homology	CDS	76745	78568	.	+	0	ID=cds-WP_014613772.1;Parent=gene-CYJ03_RS04795;Dbxref=GenBank:WP_014613772.1;Name=WP_014613772.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=CYJ03_RS04795;product=translation elongation factor 4;protein_id=WP_014613772.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	78636	79757	.	+	.	ID=gene-CYJ03_RS04800;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CYJ03_RS04800;old_locus_tag=CYJ03_004790
NZ_PJUP02000009.1	Protein Homology	CDS	78636	79757	.	+	0	ID=cds-WP_104052190.1;Parent=gene-CYJ03_RS04800;Dbxref=GenBank:WP_104052190.1;Name=WP_104052190.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=CYJ03_RS04800;product=radical SAM family heme chaperone HemW;protein_id=WP_104052190.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	79860	80849	.	+	.	ID=gene-CYJ03_RS04805;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04805;old_locus_tag=CYJ03_004795
NZ_PJUP02000009.1	Protein Homology	CDS	79860	80849	.	+	0	ID=cds-WP_104052191.1;Parent=gene-CYJ03_RS04805;Dbxref=GenBank:WP_104052191.1;Name=WP_104052191.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=CYJ03_RS04805;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_104052191.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	80864	81505	.	+	.	ID=gene-CYJ03_RS04810;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CYJ03_RS04810;old_locus_tag=CYJ03_004800
NZ_PJUP02000009.1	Protein Homology	CDS	80864	81505	.	+	0	ID=cds-WP_015729253.1;Parent=gene-CYJ03_RS04810;Dbxref=GenBank:WP_015729253.1;Name=WP_015729253.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613775.1;locus_tag=CYJ03_RS04810;product=nucleotide exchange factor GrpE;protein_id=WP_015729253.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	81569	83401	.	+	.	ID=gene-CYJ03_RS04815;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CYJ03_RS04815;old_locus_tag=CYJ03_004805
NZ_PJUP02000009.1	Protein Homology	CDS	81569	83401	.	+	0	ID=cds-WP_037542852.1;Parent=gene-CYJ03_RS04815;Dbxref=GenBank:WP_037542852.1;Name=WP_037542852.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729252.1;locus_tag=CYJ03_RS04815;product=molecular chaperone DnaK;protein_id=WP_037542852.1;transl_table=11
NZ_PJUP02000009.1	RefSeq	pseudogene	83511	83603	.	+	.	ID=gene-CYJ03_RS04820;Name=CYJ03_RS04820;end_range=83603,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS04820;old_locus_tag=CYJ03_004810;partial=true;pseudo=true
NZ_PJUP02000009.1	Protein Homology	CDS	83511	83603	.	+	0	ID=cds-CYJ03_RS04820;Parent=gene-CYJ03_RS04820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=83603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390424.2;locus_tag=CYJ03_RS04820;partial=true;product=DnaJ domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000009.1	RefSeq	pseudogene	83576	83731	.	+	.	ID=gene-CYJ03_RS04825;Name=CYJ03_RS04825;end_range=83731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS04825;old_locus_tag=CYJ03_004815;partial=true;pseudo=true;start_range=.,83576
NZ_PJUP02000009.1	Protein Homology	CDS	83576	83731	.	+	0	ID=cds-CYJ03_RS04825;Parent=gene-CYJ03_RS04825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=83731,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499565.1;locus_tag=CYJ03_RS04825;partial=true;product=AIR synthase related protein;pseudo=true;start_range=.,83576;transl_table=11
NZ_PJUP02000009.1	RefSeq	gene	84190	84247	.	-	.	ID=gene-CYJ03_RS04840;Name=CYJ03_RS04840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS04840;old_locus_tag=CYJ03_004830
NZ_PJUP02000009.1	tRNAscan-SE	tRNA	84190	84247	.	-	.	ID=rna-CYJ03_RS04840;Parent=gene-CYJ03_RS04840;anticodon=(pos:complement(84220..84222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04840;product=tRNA-His
NZ_PJUP02000009.1	tRNAscan-SE	exon	84190	84247	.	-	.	ID=exon-CYJ03_RS04840-1;Parent=rna-CYJ03_RS04840;anticodon=(pos:complement(84220..84222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04840;product=tRNA-His
NZ_PJUP02000009.1	RefSeq	gene	84258	84331	.	-	.	ID=gene-CYJ03_RS04845;Name=CYJ03_RS04845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS04845;old_locus_tag=CYJ03_004835
NZ_PJUP02000009.1	tRNAscan-SE	tRNA	84258	84331	.	-	.	ID=rna-CYJ03_RS04845;Parent=gene-CYJ03_RS04845;anticodon=(pos:complement(84297..84299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04845;product=tRNA-Trp
NZ_PJUP02000009.1	tRNAscan-SE	exon	84258	84331	.	-	.	ID=exon-CYJ03_RS04845-1;Parent=rna-CYJ03_RS04845;anticodon=(pos:complement(84297..84299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04845;product=tRNA-Trp
NZ_PJUP02000009.1	RefSeq	gene	84339	84422	.	-	.	ID=gene-CYJ03_RS04850;Name=CYJ03_RS04850;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS04850;old_locus_tag=CYJ03_004840
NZ_PJUP02000009.1	tRNAscan-SE	tRNA	84339	84422	.	-	.	ID=rna-CYJ03_RS04850;Parent=gene-CYJ03_RS04850;anticodon=(pos:complement(84386..84388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04850;product=tRNA-Tyr
NZ_PJUP02000009.1	tRNAscan-SE	exon	84339	84422	.	-	.	ID=exon-CYJ03_RS04850-1;Parent=rna-CYJ03_RS04850;anticodon=(pos:complement(84386..84388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS04850;product=tRNA-Tyr
##sequence-region NZ_PJUP02000010.1 1 78977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000010.1	RefSeq	region	1	78977	.	+	.	ID=NZ_PJUP02000010.1:1..78977;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000010.1	RefSeq	pseudogene	126	368	.	+	.	ID=gene-CYJ03_RS04855;Name=CYJ03_RS04855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS04855;old_locus_tag=CYJ03_004845;partial=true;pseudo=true;start_range=.,126
NZ_PJUP02000010.1	Protein Homology	CDS	126	368	.	+	0	ID=cds-CYJ03_RS04855;Parent=gene-CYJ03_RS04855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614632.1;locus_tag=CYJ03_RS04855;partial=true;product=ferric iron reductase;pseudo=true;start_range=.,126;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	702	2042	.	-	.	ID=gene-CYJ03_RS04860;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04860;old_locus_tag=CYJ03_004850
NZ_PJUP02000010.1	Protein Homology	CDS	702	2042	.	-	0	ID=cds-WP_014614019.1;Parent=gene-CYJ03_RS04860;Dbxref=GenBank:WP_014614019.1;Name=WP_014614019.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=CYJ03_RS04860;product=type I glutamate--ammonia ligase;protein_id=WP_014614019.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	2066	2434	.	-	.	ID=gene-CYJ03_RS04865;Name=CYJ03_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04865;old_locus_tag=CYJ03_004855
NZ_PJUP02000010.1	Protein Homology	CDS	2066	2434	.	-	0	ID=cds-WP_014614020.1;Parent=gene-CYJ03_RS04865;Dbxref=GenBank:WP_014614020.1;Name=WP_014614020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424965.1;locus_tag=CYJ03_RS04865;product=MerR family transcriptional regulator;protein_id=WP_014614020.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	2610	3857	.	-	.	ID=gene-CYJ03_RS04870;Name=CYJ03_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04870;old_locus_tag=CYJ03_004860
NZ_PJUP02000010.1	Protein Homology	CDS	2610	3857	.	-	0	ID=cds-WP_014614021.1;Parent=gene-CYJ03_RS04870;Dbxref=GenBank:WP_014614021.1;Name=WP_014614021.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614021.1;locus_tag=CYJ03_RS04870;product=methionine gamma-lyase family protein;protein_id=WP_014614021.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	3875	5107	.	-	.	ID=gene-CYJ03_RS04875;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CYJ03_RS04875;old_locus_tag=CYJ03_004865
NZ_PJUP02000010.1	Protein Homology	CDS	3875	5107	.	-	0	ID=cds-WP_101431355.1;Parent=gene-CYJ03_RS04875;Dbxref=GenBank:WP_101431355.1;Name=WP_101431355.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165422.1;locus_tag=CYJ03_RS04875;product=GTPase HflX;protein_id=WP_101431355.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	5213	5686	.	+	.	ID=gene-CYJ03_RS04880;Name=CYJ03_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04880;old_locus_tag=CYJ03_004870
NZ_PJUP02000010.1	Protein Homology	CDS	5213	5686	.	+	0	ID=cds-WP_014614023.1;Parent=gene-CYJ03_RS04880;Dbxref=GenBank:WP_014614023.1;Name=WP_014614023.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=CYJ03_RS04880;product=glutathione peroxidase;protein_id=WP_014614023.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	6444	7397	.	+	.	ID=gene-CYJ03_RS04885;Name=CYJ03_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04885;old_locus_tag=CYJ03_004875
NZ_PJUP02000010.1	Protein Homology	CDS	6444	7397	.	+	0	ID=cds-WP_101431356.1;Parent=gene-CYJ03_RS04885;Dbxref=GenBank:WP_101431356.1;Name=WP_101431356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=CYJ03_RS04885;product=alpha/beta hydrolase;protein_id=WP_101431356.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	7384	8340	.	+	.	ID=gene-CYJ03_RS04890;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04890;old_locus_tag=CYJ03_004880
NZ_PJUP02000010.1	Protein Homology	CDS	7384	8340	.	+	0	ID=cds-WP_101431357.1;Parent=gene-CYJ03_RS04890;Dbxref=GenBank:WP_101431357.1;Name=WP_101431357.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167781.1;locus_tag=CYJ03_RS04890;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_101431357.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	8333	8539	.	+	.	ID=gene-CYJ03_RS04895;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CYJ03_RS04895;old_locus_tag=CYJ03_004885
NZ_PJUP02000010.1	Protein Homology	CDS	8333	8539	.	+	0	ID=cds-WP_014614028.1;Parent=gene-CYJ03_RS04895;Dbxref=GenBank:WP_014614028.1;Name=WP_014614028.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=CYJ03_RS04895;product=RNA chaperone Hfq;protein_id=WP_014614028.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	8832	10502	.	-	.	ID=gene-CYJ03_RS04900;Name=CYJ03_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04900;old_locus_tag=CYJ03_004890
NZ_PJUP02000010.1	Protein Homology	CDS	8832	10502	.	-	0	ID=cds-WP_015729065.1;Parent=gene-CYJ03_RS04900;Dbxref=GenBank:WP_015729065.1;Name=WP_015729065.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614029.1;locus_tag=CYJ03_RS04900;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_015729065.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	10629	12131	.	-	.	ID=gene-CYJ03_RS04905;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CYJ03_RS04905;old_locus_tag=CYJ03_004895
NZ_PJUP02000010.1	Protein Homology	CDS	10629	12131	.	-	0	ID=cds-WP_014614030.1;Parent=gene-CYJ03_RS04905;Dbxref=GenBank:WP_014614030.1;Name=WP_014614030.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165429.1;locus_tag=CYJ03_RS04905;product=glycerol kinase GlpK;protein_id=WP_014614030.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	12427	13242	.	-	.	ID=gene-CYJ03_RS04910;Name=CYJ03_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04910;old_locus_tag=CYJ03_004900
NZ_PJUP02000010.1	Protein Homology	CDS	12427	13242	.	-	0	ID=cds-WP_014614031.1;Parent=gene-CYJ03_RS04910;Dbxref=GenBank:WP_014614031.1;Name=WP_014614031.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=CYJ03_RS04910;product=MIP/aquaporin family protein;protein_id=WP_014614031.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	13481	14509	.	-	.	ID=gene-CYJ03_RS04915;Name=CYJ03_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04915;old_locus_tag=CYJ03_004905
NZ_PJUP02000010.1	Protein Homology	CDS	13481	14509	.	-	0	ID=cds-WP_063284346.1;Parent=gene-CYJ03_RS04915;Dbxref=GenBank:WP_063284346.1;Name=WP_063284346.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729064.1;locus_tag=CYJ03_RS04915;product=S66 family peptidase;protein_id=WP_063284346.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	14537	15070	.	-	.	ID=gene-CYJ03_RS04920;Name=CYJ03_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04920;old_locus_tag=CYJ03_004910
NZ_PJUP02000010.1	Protein Homology	CDS	14537	15070	.	-	0	ID=cds-WP_014614033.1;Parent=gene-CYJ03_RS04920;Dbxref=GenBank:WP_014614033.1;Name=WP_014614033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165432.1;locus_tag=CYJ03_RS04920;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_014614033.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	15082	17022	.	-	.	ID=gene-CYJ03_RS04925;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CYJ03_RS04925;old_locus_tag=CYJ03_004915
NZ_PJUP02000010.1	Protein Homology	CDS	15082	17022	.	-	0	ID=cds-WP_014614034.1;Parent=gene-CYJ03_RS04925;Dbxref=GenBank:WP_014614034.1;Name=WP_014614034.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729062.1;locus_tag=CYJ03_RS04925;product=DNA mismatch repair endonuclease MutL;protein_id=WP_014614034.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	17037	19634	.	-	.	ID=gene-CYJ03_RS04930;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04930;old_locus_tag=CYJ03_004920
NZ_PJUP02000010.1	Protein Homology	CDS	17037	19634	.	-	0	ID=cds-WP_015729061.1;Parent=gene-CYJ03_RS04930;Dbxref=GenBank:WP_015729061.1;Name=WP_015729061.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=CYJ03_RS04930;product=DNA mismatch repair protein MutS;protein_id=WP_015729061.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	20289	20798	.	-	.	ID=gene-CYJ03_RS04935;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CYJ03_RS04935;old_locus_tag=CYJ03_004925
NZ_PJUP02000010.1	Protein Homology	CDS	20289	20798	.	-	0	ID=cds-WP_014614036.1;Parent=gene-CYJ03_RS04935;Dbxref=GenBank:WP_014614036.1;Name=WP_014614036.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614036.1;locus_tag=CYJ03_RS04935;product=energy coupling factor transporter S component ThiW;protein_id=WP_014614036.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	20853	21230	.	-	.	ID=gene-CYJ03_RS04940;Name=CYJ03_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04940;old_locus_tag=CYJ03_004930
NZ_PJUP02000010.1	Protein Homology	CDS	20853	21230	.	-	0	ID=cds-WP_014614037.1;Parent=gene-CYJ03_RS04940;Dbxref=GenBank:WP_014614037.1;Name=WP_014614037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=CYJ03_RS04940;product=YlbF family regulator;protein_id=WP_014614037.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	21231	22781	.	-	.	ID=gene-CYJ03_RS04945;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04945;old_locus_tag=CYJ03_004935
NZ_PJUP02000010.1	Protein Homology	CDS	21231	22781	.	-	0	ID=cds-WP_104052192.1;Parent=gene-CYJ03_RS04945;Dbxref=GenBank:WP_104052192.1;Name=WP_104052192.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=CYJ03_RS04945;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_104052192.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	22885	23184	.	-	.	ID=gene-CYJ03_RS04950;Name=CYJ03_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04950;old_locus_tag=CYJ03_004940
NZ_PJUP02000010.1	Protein Homology	CDS	22885	23184	.	-	0	ID=cds-WP_014614039.1;Parent=gene-CYJ03_RS04950;Dbxref=GenBank:WP_014614039.1;Name=WP_014614039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729060.1;locus_tag=CYJ03_RS04950;product=thiamine-binding protein;protein_id=WP_014614039.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	23443	24309	.	-	.	ID=gene-CYJ03_RS04955;Name=CYJ03_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04955;old_locus_tag=CYJ03_004945
NZ_PJUP02000010.1	Protein Homology	CDS	23443	24309	.	-	0	ID=cds-WP_014614040.1;Parent=gene-CYJ03_RS04955;Dbxref=GenBank:WP_014614040.1;Name=WP_014614040.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=CYJ03_RS04955;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_014614040.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	24310	26070	.	-	.	ID=gene-CYJ03_RS04960;Name=CYJ03_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04960;old_locus_tag=CYJ03_004950
NZ_PJUP02000010.1	Protein Homology	CDS	24310	26070	.	-	0	ID=cds-WP_104052193.1;Parent=gene-CYJ03_RS04960;Dbxref=GenBank:WP_104052193.1;Name=WP_104052193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=CYJ03_RS04960;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_104052193.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	26223	27017	.	-	.	ID=gene-CYJ03_RS04965;Name=CYJ03_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04965;old_locus_tag=CYJ03_004955
NZ_PJUP02000010.1	Protein Homology	CDS	26223	27017	.	-	0	ID=cds-WP_014614042.1;Parent=gene-CYJ03_RS04965;Dbxref=GenBank:WP_014614042.1;Name=WP_014614042.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167795.1;locus_tag=CYJ03_RS04965;product=TIGR00282 family metallophosphoesterase;protein_id=WP_014614042.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	27348	29522	.	-	.	ID=gene-CYJ03_RS04970;Name=CYJ03_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04970;old_locus_tag=CYJ03_004960
NZ_PJUP02000010.1	Protein Homology	CDS	27348	29522	.	-	0	ID=cds-WP_099997415.1;Parent=gene-CYJ03_RS04970;Dbxref=GenBank:WP_099997415.1;Name=WP_099997415.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=CYJ03_RS04970;product=heavy metal translocating P-type ATPase;protein_id=WP_099997415.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	29506	29886	.	-	.	ID=gene-CYJ03_RS04975;Name=CYJ03_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04975;old_locus_tag=CYJ03_004965
NZ_PJUP02000010.1	Protein Homology	CDS	29506	29886	.	-	0	ID=cds-WP_096535761.1;Parent=gene-CYJ03_RS04975;Dbxref=GenBank:WP_096535761.1;Name=WP_096535761.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=CYJ03_RS04975;product=ArsR/SmtB family transcription factor;protein_id=WP_096535761.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	30084	30302	.	+	.	ID=gene-CYJ03_RS04980;Name=CYJ03_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04980;old_locus_tag=CYJ03_004970
NZ_PJUP02000010.1	Protein Homology	CDS	30084	30302	.	+	0	ID=cds-WP_014614046.1;Parent=gene-CYJ03_RS04980;Dbxref=GenBank:WP_014614046.1;Name=WP_014614046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165444.1;locus_tag=CYJ03_RS04980;product=hypothetical protein;protein_id=WP_014614046.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	30425	31984	.	-	.	ID=gene-CYJ03_RS04985;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CYJ03_RS04985;old_locus_tag=CYJ03_004975
NZ_PJUP02000010.1	Protein Homology	CDS	30425	31984	.	-	0	ID=cds-WP_014614047.1;Parent=gene-CYJ03_RS04985;Dbxref=GenBank:WP_014614047.1;Name=WP_014614047.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CYJ03_RS04985;product=ribonuclease Y;protein_id=WP_014614047.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	32211	33254	.	-	.	ID=gene-CYJ03_RS04990;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04990;old_locus_tag=CYJ03_004980
NZ_PJUP02000010.1	Protein Homology	CDS	32211	33254	.	-	0	ID=cds-WP_014614049.1;Parent=gene-CYJ03_RS04990;Dbxref=GenBank:WP_014614049.1;Name=WP_014614049.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=CYJ03_RS04990;product=recombinase RecA;protein_id=WP_014614049.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	33393	34568	.	-	.	ID=gene-CYJ03_RS04995;Name=CYJ03_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04995;old_locus_tag=CYJ03_004985
NZ_PJUP02000010.1	Protein Homology	CDS	33393	34568	.	-	0	ID=cds-WP_104052194.1;Parent=gene-CYJ03_RS04995;Dbxref=GenBank:WP_104052194.1;Name=WP_104052194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165447.1;locus_tag=CYJ03_RS04995;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_104052194.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	34789	35373	.	-	.	ID=gene-CYJ03_RS05000;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05000;old_locus_tag=CYJ03_004990
NZ_PJUP02000010.1	Protein Homology	CDS	34789	35373	.	-	0	ID=cds-WP_014614051.1;Parent=gene-CYJ03_RS05000;Dbxref=GenBank:WP_014614051.1;Name=WP_014614051.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=CYJ03_RS05000;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_014614051.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	35415	35810	.	-	.	ID=gene-CYJ03_RS05005;Name=CYJ03_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05005;old_locus_tag=CYJ03_004995
NZ_PJUP02000010.1	Protein Homology	CDS	35415	35810	.	-	0	ID=cds-WP_104052195.1;Parent=gene-CYJ03_RS05005;Dbxref=GenBank:WP_104052195.1;Name=WP_104052195.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167802.1;locus_tag=CYJ03_RS05005;product=helix-turn-helix domain-containing protein;protein_id=WP_104052195.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	35829	36674	.	-	.	ID=gene-CYJ03_RS05010;Name=CYJ03_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05010;old_locus_tag=CYJ03_005000
NZ_PJUP02000010.1	Protein Homology	CDS	35829	36674	.	-	0	ID=cds-WP_096535762.1;Parent=gene-CYJ03_RS05010;Dbxref=GenBank:WP_096535762.1;Name=WP_096535762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165450.1;locus_tag=CYJ03_RS05010;product=DUF3388 domain-containing protein;protein_id=WP_096535762.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	36731	37435	.	-	.	ID=gene-CYJ03_RS05015;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=CYJ03_RS05015;old_locus_tag=CYJ03_005005
NZ_PJUP02000010.1	Protein Homology	CDS	36731	37435	.	-	0	ID=cds-WP_037543163.1;Parent=gene-CYJ03_RS05015;Dbxref=GenBank:WP_037543163.1;Name=WP_037543163.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165451.1;locus_tag=CYJ03_RS05015;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_037543163.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	37432	38721	.	-	.	ID=gene-CYJ03_RS05020;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=CYJ03_RS05020;old_locus_tag=CYJ03_005010
NZ_PJUP02000010.1	Protein Homology	CDS	37432	38721	.	-	0	ID=cds-WP_063278804.1;Parent=gene-CYJ03_RS05020;Dbxref=GenBank:WP_063278804.1;Name=WP_063278804.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729056.1;locus_tag=CYJ03_RS05020;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_063278804.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	38714	39988	.	-	.	ID=gene-CYJ03_RS05025;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=CYJ03_RS05025;old_locus_tag=CYJ03_005015
NZ_PJUP02000010.1	Protein Homology	CDS	38714	39988	.	-	0	ID=cds-WP_099991937.1;Parent=gene-CYJ03_RS05025;Dbxref=GenBank:WP_099991937.1;Name=WP_099991937.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=CYJ03_RS05025;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_099991937.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	40022	40738	.	-	.	ID=gene-CYJ03_RS05030;Name=CYJ03_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05030;old_locus_tag=CYJ03_005020
NZ_PJUP02000010.1	Protein Homology	CDS	40022	40738	.	-	0	ID=cds-WP_014614057.1;Parent=gene-CYJ03_RS05030;Dbxref=GenBank:WP_014614057.1;Name=WP_014614057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=CYJ03_RS05030;product=GntR family transcriptional regulator;protein_id=WP_014614057.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	40744	43107	.	-	.	ID=gene-CYJ03_RS05035;Name=CYJ03_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05035;old_locus_tag=CYJ03_005025
NZ_PJUP02000010.1	Protein Homology	CDS	40744	43107	.	-	0	ID=cds-WP_104052196.1;Parent=gene-CYJ03_RS05035;Dbxref=GenBank:WP_104052196.1;Name=WP_104052196.1;Ontology_term=GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729054.1;locus_tag=CYJ03_RS05035;product=DNA translocase FtsK;protein_id=WP_104052196.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	43246	44919	.	-	.	ID=gene-CYJ03_RS05040;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05040;old_locus_tag=CYJ03_005030
NZ_PJUP02000010.1	Protein Homology	CDS	43246	44919	.	-	0	ID=cds-WP_014614059.1;Parent=gene-CYJ03_RS05040;Dbxref=GenBank:WP_014614059.1;Name=WP_014614059.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CYJ03_RS05040;product=ribonuclease J2;protein_id=WP_014614059.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	45429	47522	.	-	.	ID=gene-CYJ03_RS05050;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CYJ03_RS05050;old_locus_tag=CYJ03_005040
NZ_PJUP02000010.1	Protein Homology	CDS	45429	47522	.	-	0	ID=cds-WP_015729052.1;Parent=gene-CYJ03_RS05050;Dbxref=GenBank:WP_015729052.1;Name=WP_015729052.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614061.1;locus_tag=CYJ03_RS05050;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_015729052.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	47681	47950	.	-	.	ID=gene-CYJ03_RS05055;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CYJ03_RS05055;old_locus_tag=CYJ03_005045
NZ_PJUP02000010.1	Protein Homology	CDS	47681	47950	.	-	0	ID=cds-WP_014614062.1;Parent=gene-CYJ03_RS05055;Dbxref=GenBank:WP_014614062.1;Name=WP_014614062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CYJ03_RS05055;product=30S ribosomal protein S15;protein_id=WP_014614062.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	48051	49022	.	-	.	ID=gene-CYJ03_RS05060;Name=CYJ03_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05060;old_locus_tag=CYJ03_005050
NZ_PJUP02000010.1	Protein Homology	CDS	48051	49022	.	-	0	ID=cds-WP_104052197.1;Parent=gene-CYJ03_RS05060;Dbxref=GenBank:WP_104052197.1;Name=WP_104052197.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476021.1;locus_tag=CYJ03_RS05060;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_104052197.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	49037	49954	.	-	.	ID=gene-CYJ03_RS05065;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05065;old_locus_tag=CYJ03_005055
NZ_PJUP02000010.1	Protein Homology	CDS	49037	49954	.	-	0	ID=cds-WP_014614064.1;Parent=gene-CYJ03_RS05065;Dbxref=GenBank:WP_014614064.1;Name=WP_014614064.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=CYJ03_RS05065;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014614064.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	50039	50383	.	-	.	ID=gene-CYJ03_RS05070;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05070;old_locus_tag=CYJ03_005060
NZ_PJUP02000010.1	Protein Homology	CDS	50039	50383	.	-	0	ID=cds-WP_014614065.1;Parent=gene-CYJ03_RS05070;Dbxref=GenBank:WP_014614065.1;Name=WP_014614065.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=CYJ03_RS05070;product=30S ribosome-binding factor RbfA;protein_id=WP_014614065.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	51127	51366	.	-	.	ID=gene-CYJ03_RS05075;Name=CYJ03_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05075;old_locus_tag=CYJ03_005065
NZ_PJUP02000010.1	Protein Homology	CDS	51127	51366	.	-	0	ID=cds-WP_014614066.1;Parent=gene-CYJ03_RS05075;Dbxref=GenBank:WP_014614066.1;Name=WP_014614066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614066.1;locus_tag=CYJ03_RS05075;product=hypothetical protein;protein_id=WP_014614066.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	51581	53719	.	-	.	ID=gene-CYJ03_RS05080;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05080;old_locus_tag=CYJ03_005070
NZ_PJUP02000010.1	Protein Homology	CDS	51581	53719	.	-	0	ID=cds-WP_104052198.1;Parent=gene-CYJ03_RS05080;Dbxref=GenBank:WP_104052198.1;Name=WP_104052198.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275931.1;locus_tag=CYJ03_RS05080;product=translation initiation factor IF-2;protein_id=WP_104052198.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	53736	54041	.	-	.	ID=gene-CYJ03_RS05085;Name=CYJ03_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05085;old_locus_tag=CYJ03_005075
NZ_PJUP02000010.1	Protein Homology	CDS	53736	54041	.	-	0	ID=cds-WP_014614068.1;Parent=gene-CYJ03_RS05085;Dbxref=GenBank:WP_014614068.1;Name=WP_014614068.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=CYJ03_RS05085;product=YlxQ family RNA-binding protein;protein_id=WP_014614068.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	54038	54325	.	-	.	ID=gene-CYJ03_RS05090;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=CYJ03_RS05090;old_locus_tag=CYJ03_005080
NZ_PJUP02000010.1	Protein Homology	CDS	54038	54325	.	-	0	ID=cds-WP_014614069.1;Parent=gene-CYJ03_RS05090;Dbxref=GenBank:WP_014614069.1;Name=WP_014614069.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=CYJ03_RS05090;product=RNase P modulator RnpM;protein_id=WP_014614069.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	54337	55515	.	-	.	ID=gene-CYJ03_RS05095;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05095;old_locus_tag=CYJ03_005085
NZ_PJUP02000010.1	Protein Homology	CDS	54337	55515	.	-	0	ID=cds-WP_014614070.1;Parent=gene-CYJ03_RS05095;Dbxref=GenBank:WP_014614070.1;Name=WP_014614070.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729050.1;locus_tag=CYJ03_RS05095;product=transcription termination factor NusA;protein_id=WP_014614070.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	55536	56003	.	-	.	ID=gene-CYJ03_RS05100;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CYJ03_RS05100;old_locus_tag=CYJ03_005090
NZ_PJUP02000010.1	Protein Homology	CDS	55536	56003	.	-	0	ID=cds-WP_014614071.1;Parent=gene-CYJ03_RS05100;Dbxref=GenBank:WP_014614071.1;Name=WP_014614071.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=CYJ03_RS05100;product=ribosome maturation factor RimP;protein_id=WP_014614071.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	56128	60435	.	-	.	ID=gene-CYJ03_RS05105;Name=CYJ03_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05105;old_locus_tag=CYJ03_005095
NZ_PJUP02000010.1	Protein Homology	CDS	56128	60435	.	-	0	ID=cds-WP_104052199.1;Parent=gene-CYJ03_RS05105;Dbxref=GenBank:WP_104052199.1;Name=WP_104052199.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729049.1;locus_tag=CYJ03_RS05105;product=PolC-type DNA polymerase III;protein_id=WP_104052199.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	61352	63055	.	-	.	ID=gene-CYJ03_RS05110;Name=CYJ03_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05110;old_locus_tag=CYJ03_005100
NZ_PJUP02000010.1	Protein Homology	CDS	61352	63055	.	-	0	ID=cds-WP_014614074.1;Parent=gene-CYJ03_RS05110;Dbxref=GenBank:WP_014614074.1;Name=WP_014614074.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275937.1;locus_tag=CYJ03_RS05110;product=proline--tRNA ligase;protein_id=WP_014614074.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	63080	64360	.	-	.	ID=gene-CYJ03_RS05115;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CYJ03_RS05115;old_locus_tag=CYJ03_005105
NZ_PJUP02000010.1	Protein Homology	CDS	63080	64360	.	-	0	ID=cds-WP_015729046.1;Parent=gene-CYJ03_RS05115;Dbxref=GenBank:WP_015729046.1;Name=WP_015729046.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=CYJ03_RS05115;product=RIP metalloprotease RseP;protein_id=WP_015729046.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	64367	65497	.	-	.	ID=gene-CYJ03_RS05120;Name=CYJ03_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05120;old_locus_tag=CYJ03_005110
NZ_PJUP02000010.1	Protein Homology	CDS	64367	65497	.	-	0	ID=cds-WP_014614076.1;Parent=gene-CYJ03_RS05120;Dbxref=GenBank:WP_014614076.1;Name=WP_014614076.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016910764.1;locus_tag=CYJ03_RS05120;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_014614076.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	65514	66296	.	-	.	ID=gene-CYJ03_RS05125;Name=CYJ03_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05125;old_locus_tag=CYJ03_005115
NZ_PJUP02000010.1	Protein Homology	CDS	65514	66296	.	-	0	ID=cds-WP_014614077.1;Parent=gene-CYJ03_RS05125;Dbxref=GenBank:WP_014614077.1;Name=WP_014614077.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=CYJ03_RS05125;product=phosphatidate cytidylyltransferase;protein_id=WP_014614077.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	66311	67072	.	-	.	ID=gene-CYJ03_RS05130;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=CYJ03_RS05130;old_locus_tag=CYJ03_005120
NZ_PJUP02000010.1	Protein Homology	CDS	66311	67072	.	-	0	ID=cds-WP_014614078.1;Parent=gene-CYJ03_RS05130;Dbxref=GenBank:WP_014614078.1;Name=WP_014614078.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=CYJ03_RS05130;product=undecaprenyl pyrophosphate synthase;protein_id=WP_014614078.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	67316	67870	.	-	.	ID=gene-CYJ03_RS05135;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CYJ03_RS05135;old_locus_tag=CYJ03_005125
NZ_PJUP02000010.1	Protein Homology	CDS	67316	67870	.	-	0	ID=cds-WP_014614079.1;Parent=gene-CYJ03_RS05135;Dbxref=GenBank:WP_014614079.1;Name=WP_014614079.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CYJ03_RS05135;product=ribosome recycling factor;protein_id=WP_014614079.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	67888	68610	.	-	.	ID=gene-CYJ03_RS05140;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CYJ03_RS05140;old_locus_tag=CYJ03_005130
NZ_PJUP02000010.1	Protein Homology	CDS	67888	68610	.	-	0	ID=cds-WP_014614080.1;Parent=gene-CYJ03_RS05140;Dbxref=GenBank:WP_014614080.1;Name=WP_014614080.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CYJ03_RS05140;product=UMP kinase;protein_id=WP_014614080.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	68762	69640	.	-	.	ID=gene-CYJ03_RS05145;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CYJ03_RS05145;old_locus_tag=CYJ03_005135
NZ_PJUP02000010.1	Protein Homology	CDS	68762	69640	.	-	0	ID=cds-WP_014614081.1;Parent=gene-CYJ03_RS05145;Dbxref=GenBank:WP_014614081.1;Name=WP_014614081.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CYJ03_RS05145;product=translation elongation factor Ts;protein_id=WP_014614081.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	69730	70527	.	-	.	ID=gene-CYJ03_RS05150;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05150;old_locus_tag=CYJ03_005140
NZ_PJUP02000010.1	Protein Homology	CDS	69730	70527	.	-	0	ID=cds-WP_014614082.1;Parent=gene-CYJ03_RS05150;Dbxref=GenBank:WP_014614082.1;Name=WP_014614082.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=CYJ03_RS05150;product=30S ribosomal protein S2;protein_id=WP_014614082.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	70694	71467	.	-	.	ID=gene-CYJ03_RS05155;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=CYJ03_RS05155;old_locus_tag=CYJ03_005145
NZ_PJUP02000010.1	Protein Homology	CDS	70694	71467	.	-	0	ID=cds-WP_014614083.1;Parent=gene-CYJ03_RS05155;Dbxref=GenBank:WP_014614083.1;Name=WP_014614083.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=CYJ03_RS05155;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_014614083.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	71487	72896	.	-	.	ID=gene-CYJ03_RS05160;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CYJ03_RS05160;old_locus_tag=CYJ03_005150
NZ_PJUP02000010.1	Protein Homology	CDS	71487	72896	.	-	0	ID=cds-WP_101431372.1;Parent=gene-CYJ03_RS05160;Dbxref=GenBank:WP_101431372.1;Name=WP_101431372.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275946.1;locus_tag=CYJ03_RS05160;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_101431372.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	72911	73453	.	-	.	ID=gene-CYJ03_RS05165;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CYJ03_RS05165;old_locus_tag=CYJ03_005155
NZ_PJUP02000010.1	Protein Homology	CDS	72911	73453	.	-	0	ID=cds-WP_014614085.1;Parent=gene-CYJ03_RS05165;Dbxref=GenBank:WP_014614085.1;Name=WP_014614085.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=CYJ03_RS05165;product=ATP-dependent protease subunit HslV;protein_id=WP_014614085.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	73460	74320	.	-	.	ID=gene-CYJ03_RS05170;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CYJ03_RS05170;old_locus_tag=CYJ03_005160
NZ_PJUP02000010.1	Protein Homology	CDS	73460	74320	.	-	0	ID=cds-WP_373408322.1;Parent=gene-CYJ03_RS05170;Dbxref=GenBank:WP_373408322.1;Name=WP_373408322.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453085.1;locus_tag=CYJ03_RS05170;product=tyrosine recombinase XerC;protein_id=WP_373408322.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	74470	75774	.	-	.	ID=gene-CYJ03_RS05175;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CYJ03_RS05175;old_locus_tag=CYJ03_005165
NZ_PJUP02000010.1	Protein Homology	CDS	74470	75774	.	-	0	ID=cds-WP_104052200.1;Parent=gene-CYJ03_RS05175;Dbxref=GenBank:WP_104052200.1;Name=WP_104052200.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=CYJ03_RS05175;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_104052200.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	75802	77871	.	-	.	ID=gene-CYJ03_RS05180;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05180;old_locus_tag=CYJ03_005170
NZ_PJUP02000010.1	Protein Homology	CDS	75802	77871	.	-	0	ID=cds-WP_014614088.1;Parent=gene-CYJ03_RS05180;Dbxref=GenBank:WP_014614088.1;Name=WP_014614088.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CYJ03_RS05180;product=type I DNA topoisomerase;protein_id=WP_014614088.1;transl_table=11
NZ_PJUP02000010.1	RefSeq	gene	77955	78842	.	-	.	ID=gene-CYJ03_RS05185;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05185;old_locus_tag=CYJ03_005175
NZ_PJUP02000010.1	Protein Homology	CDS	77955	78842	.	-	0	ID=cds-WP_063284339.1;Parent=gene-CYJ03_RS05185;Dbxref=GenBank:WP_063284339.1;Name=WP_063284339.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614089.1;locus_tag=CYJ03_RS05185;product=DNA-processing protein DprA;protein_id=WP_063284339.1;transl_table=11
##sequence-region NZ_PJUP02000014.1 1 65658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000014.1	RefSeq	region	1	65658	.	+	.	ID=NZ_PJUP02000014.1:1..65658;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000014.1	RefSeq	gene	159	422	.	+	.	ID=gene-CYJ03_RS06325;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06325;old_locus_tag=CYJ03_006315
NZ_PJUP02000014.1	Protein Homology	CDS	159	422	.	+	0	ID=cds-WP_014613221.1;Parent=gene-CYJ03_RS06325;Dbxref=GenBank:WP_014613221.1;Name=WP_014613221.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CYJ03_RS06325;product=30S ribosomal protein S17;protein_id=WP_014613221.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	451	819	.	+	.	ID=gene-CYJ03_RS06330;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CYJ03_RS06330;old_locus_tag=CYJ03_006320
NZ_PJUP02000014.1	Protein Homology	CDS	451	819	.	+	0	ID=cds-WP_014613222.1;Parent=gene-CYJ03_RS06330;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=CYJ03_RS06330;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	863	1177	.	+	.	ID=gene-CYJ03_RS06335;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CYJ03_RS06335;old_locus_tag=CYJ03_006325
NZ_PJUP02000014.1	Protein Homology	CDS	863	1177	.	+	0	ID=cds-WP_014613223.1;Parent=gene-CYJ03_RS06335;Dbxref=GenBank:WP_014613223.1;Name=WP_014613223.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613223.1;locus_tag=CYJ03_RS06335;product=50S ribosomal protein L24;protein_id=WP_014613223.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	1203	1742	.	+	.	ID=gene-CYJ03_RS06340;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CYJ03_RS06340;old_locus_tag=CYJ03_006330
NZ_PJUP02000014.1	Protein Homology	CDS	1203	1742	.	+	0	ID=cds-WP_014613224.1;Parent=gene-CYJ03_RS06340;Dbxref=GenBank:WP_014613224.1;Name=WP_014613224.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=CYJ03_RS06340;product=50S ribosomal protein L5;protein_id=WP_014613224.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	1764	1949	.	+	.	ID=gene-CYJ03_RS06345;Name=CYJ03_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06345;old_locus_tag=CYJ03_006335
NZ_PJUP02000014.1	Protein Homology	CDS	1764	1949	.	+	0	ID=cds-WP_014613225.1;Parent=gene-CYJ03_RS06345;Dbxref=GenBank:WP_014613225.1;Name=WP_014613225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=CYJ03_RS06345;product=type Z 30S ribosomal protein S14;protein_id=WP_014613225.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	1980	2378	.	+	.	ID=gene-CYJ03_RS06350;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CYJ03_RS06350;old_locus_tag=CYJ03_006340
NZ_PJUP02000014.1	Protein Homology	CDS	1980	2378	.	+	0	ID=cds-WP_014613226.1;Parent=gene-CYJ03_RS06350;Dbxref=GenBank:WP_014613226.1;Name=WP_014613226.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CYJ03_RS06350;product=30S ribosomal protein S8;protein_id=WP_014613226.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	2407	2943	.	+	.	ID=gene-CYJ03_RS06355;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CYJ03_RS06355;old_locus_tag=CYJ03_006345
NZ_PJUP02000014.1	Protein Homology	CDS	2407	2943	.	+	0	ID=cds-WP_014613227.1;Parent=gene-CYJ03_RS06355;Dbxref=GenBank:WP_014613227.1;Name=WP_014613227.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CYJ03_RS06355;product=50S ribosomal protein L6;protein_id=WP_014613227.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	2975	3334	.	+	.	ID=gene-CYJ03_RS06360;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CYJ03_RS06360;old_locus_tag=CYJ03_006350
NZ_PJUP02000014.1	Protein Homology	CDS	2975	3334	.	+	0	ID=cds-WP_014613228.1;Parent=gene-CYJ03_RS06360;Dbxref=GenBank:WP_014613228.1;Name=WP_014613228.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CYJ03_RS06360;product=50S ribosomal protein L18;protein_id=WP_014613228.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	3357	3857	.	+	.	ID=gene-CYJ03_RS06365;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CYJ03_RS06365;old_locus_tag=CYJ03_006355
NZ_PJUP02000014.1	Protein Homology	CDS	3357	3857	.	+	0	ID=cds-WP_014613229.1;Parent=gene-CYJ03_RS06365;Dbxref=GenBank:WP_014613229.1;Name=WP_014613229.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CYJ03_RS06365;product=30S ribosomal protein S5;protein_id=WP_014613229.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	3874	4053	.	+	.	ID=gene-CYJ03_RS06370;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06370;old_locus_tag=CYJ03_006360
NZ_PJUP02000014.1	Protein Homology	CDS	3874	4053	.	+	0	ID=cds-WP_014613230.1;Parent=gene-CYJ03_RS06370;Dbxref=GenBank:WP_014613230.1;Name=WP_014613230.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=CYJ03_RS06370;product=50S ribosomal protein L30;protein_id=WP_014613230.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	4070	4510	.	+	.	ID=gene-CYJ03_RS06375;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CYJ03_RS06375;old_locus_tag=CYJ03_006365
NZ_PJUP02000014.1	Protein Homology	CDS	4070	4510	.	+	0	ID=cds-WP_014613231.1;Parent=gene-CYJ03_RS06375;Dbxref=GenBank:WP_014613231.1;Name=WP_014613231.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=CYJ03_RS06375;product=50S ribosomal protein L15;protein_id=WP_014613231.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	4510	5802	.	+	.	ID=gene-CYJ03_RS06380;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CYJ03_RS06380;old_locus_tag=CYJ03_006370
NZ_PJUP02000014.1	Protein Homology	CDS	4510	5802	.	+	0	ID=cds-WP_014613232.1;Parent=gene-CYJ03_RS06380;Dbxref=GenBank:WP_014613232.1;Name=WP_014613232.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CYJ03_RS06380;product=preprotein translocase subunit SecY;protein_id=WP_014613232.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	5820	6473	.	+	.	ID=gene-CYJ03_RS06385;Name=CYJ03_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06385;old_locus_tag=CYJ03_006375
NZ_PJUP02000014.1	Protein Homology	CDS	5820	6473	.	+	0	ID=cds-WP_014613233.1;Parent=gene-CYJ03_RS06385;Dbxref=GenBank:WP_014613233.1;Name=WP_014613233.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613233.1;locus_tag=CYJ03_RS06385;product=adenylate kinase;protein_id=WP_014613233.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	6640	6858	.	+	.	ID=gene-CYJ03_RS06390;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06390;old_locus_tag=CYJ03_006380
NZ_PJUP02000014.1	Protein Homology	CDS	6640	6858	.	+	0	ID=cds-WP_001118443.1;Parent=gene-CYJ03_RS06390;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=CYJ03_RS06390;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	6890	7003	.	+	.	ID=gene-CYJ03_RS06395;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06395;old_locus_tag=CYJ03_006385
NZ_PJUP02000014.1	Protein Homology	CDS	6890	7003	.	+	0	ID=cds-WP_002509257.1;Parent=gene-CYJ03_RS06395;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=CYJ03_RS06395;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	7027	7392	.	+	.	ID=gene-CYJ03_RS06400;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CYJ03_RS06400;old_locus_tag=CYJ03_006390
NZ_PJUP02000014.1	Protein Homology	CDS	7027	7392	.	+	0	ID=cds-WP_014613234.1;Parent=gene-CYJ03_RS06400;Dbxref=GenBank:WP_014613234.1;Name=WP_014613234.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CYJ03_RS06400;product=30S ribosomal protein S13;protein_id=WP_014613234.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	7417	7806	.	+	.	ID=gene-CYJ03_RS06405;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CYJ03_RS06405;old_locus_tag=CYJ03_006395
NZ_PJUP02000014.1	Protein Homology	CDS	7417	7806	.	+	0	ID=cds-WP_014613235.1;Parent=gene-CYJ03_RS06405;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CYJ03_RS06405;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	7882	8826	.	+	.	ID=gene-CYJ03_RS06410;Name=CYJ03_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06410;old_locus_tag=CYJ03_006400
NZ_PJUP02000014.1	Protein Homology	CDS	7882	8826	.	+	0	ID=cds-WP_014613236.1;Parent=gene-CYJ03_RS06410;Dbxref=GenBank:WP_014613236.1;Name=WP_014613236.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CYJ03_RS06410;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014613236.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	8843	9211	.	+	.	ID=gene-CYJ03_RS06415;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06415;old_locus_tag=CYJ03_006405
NZ_PJUP02000014.1	Protein Homology	CDS	8843	9211	.	+	0	ID=cds-WP_014613237.1;Parent=gene-CYJ03_RS06415;Dbxref=GenBank:WP_014613237.1;Name=WP_014613237.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CYJ03_RS06415;product=50S ribosomal protein L17;protein_id=WP_014613237.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	9690	10499	.	+	.	ID=gene-CYJ03_RS06420;Name=CYJ03_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06420;old_locus_tag=CYJ03_006410
NZ_PJUP02000014.1	Protein Homology	CDS	9690	10499	.	+	0	ID=cds-WP_015729512.1;Parent=gene-CYJ03_RS06420;Dbxref=GenBank:WP_015729512.1;Name=WP_015729512.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167910.1;locus_tag=CYJ03_RS06420;product=energy-coupling factor transporter ATPase;protein_id=WP_015729512.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	10496	11362	.	+	.	ID=gene-CYJ03_RS06425;Name=CYJ03_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06425;old_locus_tag=CYJ03_006415
NZ_PJUP02000014.1	Protein Homology	CDS	10496	11362	.	+	0	ID=cds-WP_099986752.1;Parent=gene-CYJ03_RS06425;Dbxref=GenBank:WP_099986752.1;Name=WP_099986752.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166626.1;locus_tag=CYJ03_RS06425;product=energy-coupling factor transporter ATPase;protein_id=WP_099986752.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	11352	12155	.	+	.	ID=gene-CYJ03_RS06430;Name=CYJ03_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06430;old_locus_tag=CYJ03_006420
NZ_PJUP02000014.1	Protein Homology	CDS	11352	12155	.	+	0	ID=cds-WP_014613240.1;Parent=gene-CYJ03_RS06430;Dbxref=GenBank:WP_014613240.1;Name=WP_014613240.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613240.1;locus_tag=CYJ03_RS06430;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_014613240.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	12171	12974	.	+	.	ID=gene-CYJ03_RS06435;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06435;old_locus_tag=CYJ03_006425
NZ_PJUP02000014.1	Protein Homology	CDS	12171	12974	.	+	0	ID=cds-WP_104052243.1;Parent=gene-CYJ03_RS06435;Dbxref=GenBank:WP_104052243.1;Name=WP_104052243.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167913.1;locus_tag=CYJ03_RS06435;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_104052243.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	13183	13620	.	+	.	ID=gene-CYJ03_RS06440;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CYJ03_RS06440;old_locus_tag=CYJ03_006430
NZ_PJUP02000014.1	Protein Homology	CDS	13183	13620	.	+	0	ID=cds-WP_014613242.1;Parent=gene-CYJ03_RS06440;Dbxref=GenBank:WP_014613242.1;Name=WP_014613242.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CYJ03_RS06440;product=50S ribosomal protein L13;protein_id=WP_014613242.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	13640	14032	.	+	.	ID=gene-CYJ03_RS06445;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ03_RS06445;old_locus_tag=CYJ03_006435
NZ_PJUP02000014.1	Protein Homology	CDS	13640	14032	.	+	0	ID=cds-WP_037542446.1;Parent=gene-CYJ03_RS06445;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=CYJ03_RS06445;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	pseudogene	14152	14376	.	+	.	ID=gene-CYJ03_RS06450;Name=CYJ03_RS06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS06450;old_locus_tag=CYJ03_006440;partial=true;pseudo=true;start_range=.,14152
NZ_PJUP02000014.1	Protein Homology	CDS	14152	14376	.	+	0	ID=cds-CYJ03_RS06450;Parent=gene-CYJ03_RS06450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS06450;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;start_range=.,14152;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	14456	15892	.	+	.	ID=gene-CYJ03_RS06455;Name=CYJ03_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06455;old_locus_tag=CYJ03_006445
NZ_PJUP02000014.1	Protein Homology	CDS	14456	15892	.	+	0	ID=cds-WP_101457467.1;Parent=gene-CYJ03_RS06455;Dbxref=GenBank:WP_101457467.1;Name=WP_101457467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204270.1;locus_tag=CYJ03_RS06455;product=ATP-binding protein;protein_id=WP_101457467.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	16141	16320	.	+	.	ID=gene-CYJ03_RS06460;Name=CYJ03_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06460;old_locus_tag=CYJ03_006450
NZ_PJUP02000014.1	Protein Homology	CDS	16141	16320	.	+	0	ID=cds-WP_099986750.1;Parent=gene-CYJ03_RS06460;Dbxref=GenBank:WP_099986750.1;Name=WP_099986750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613246.1;locus_tag=CYJ03_RS06460;product=hypothetical protein;protein_id=WP_099986750.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	16478	16567	.	+	.	ID=gene-CYJ03_RS12815;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CYJ03_RS12815
NZ_PJUP02000014.1	Protein Homology	CDS	16478	16567	.	+	0	ID=cds-WP_110148278.1;Parent=gene-CYJ03_RS12815;Dbxref=GenBank:WP_110148278.1;Name=WP_110148278.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012598.7;locus_tag=CYJ03_RS12815;product=30S ribosomal protein S9;protein_id=WP_110148278.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	16857	17402	.	-	.	ID=gene-CYJ03_RS06465;Name=CYJ03_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06465;old_locus_tag=CYJ03_006455
NZ_PJUP02000014.1	Protein Homology	CDS	16857	17402	.	-	0	ID=cds-WP_101457466.1;Parent=gene-CYJ03_RS06465;Dbxref=GenBank:WP_101457466.1;Name=WP_101457466.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219632.1;locus_tag=CYJ03_RS06465;product=cysteine hydrolase family protein;protein_id=WP_101457466.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	17563	18456	.	+	.	ID=gene-CYJ03_RS06470;Name=CYJ03_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06470;old_locus_tag=CYJ03_006460
NZ_PJUP02000014.1	Protein Homology	CDS	17563	18456	.	+	0	ID=cds-WP_225550139.1;Parent=gene-CYJ03_RS06470;Dbxref=GenBank:WP_225550139.1;Name=WP_225550139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166631.1;locus_tag=CYJ03_RS06470;product=sce7726 family protein;protein_id=WP_225550139.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	18431	19351	.	+	.	ID=gene-CYJ03_RS06475;Name=CYJ03_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06475;old_locus_tag=CYJ03_006465
NZ_PJUP02000014.1	Protein Homology	CDS	18431	19351	.	+	0	ID=cds-WP_037542453.1;Parent=gene-CYJ03_RS06475;Dbxref=GenBank:WP_037542453.1;Name=WP_037542453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033831.1;locus_tag=CYJ03_RS06475;product=sce7725 family protein;protein_id=WP_037542453.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	19357	20436	.	+	.	ID=gene-CYJ03_RS06480;Name=CYJ03_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06480;old_locus_tag=CYJ03_006470
NZ_PJUP02000014.1	Protein Homology	CDS	19357	20436	.	+	0	ID=cds-WP_172425810.1;Parent=gene-CYJ03_RS06480;Dbxref=GenBank:WP_172425810.1;Name=WP_172425810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.7;locus_tag=CYJ03_RS06480;product=RES family NAD+ phosphorylase;protein_id=WP_172425810.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	20902	21336	.	+	.	ID=gene-CYJ03_RS06485;Name=CYJ03_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06485;old_locus_tag=CYJ03_006475
NZ_PJUP02000014.1	GeneMarkS-2+	CDS	20902	21336	.	+	0	ID=cds-WP_020219634.1;Parent=gene-CYJ03_RS06485;Dbxref=GenBank:WP_020219634.1;Name=WP_020219634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS06485;product=hypothetical protein;protein_id=WP_020219634.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	21510	22061	.	+	.	ID=gene-CYJ03_RS06490;Name=CYJ03_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06490;old_locus_tag=CYJ03_006480
NZ_PJUP02000014.1	Protein Homology	CDS	21510	22061	.	+	0	ID=cds-WP_230493238.1;Parent=gene-CYJ03_RS06490;Dbxref=GenBank:WP_230493238.1;Name=WP_230493238.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729500.1;locus_tag=CYJ03_RS06490;product=MFS transporter;protein_id=WP_230493238.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	22342	25176	.	+	.	ID=gene-CYJ03_RS06495;Name=CYJ03_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06495;old_locus_tag=CYJ03_006485
NZ_PJUP02000014.1	Protein Homology	CDS	22342	25176	.	+	0	ID=cds-WP_065520395.1;Parent=gene-CYJ03_RS06495;Dbxref=GenBank:WP_065520395.1;Name=WP_065520395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047202.3;locus_tag=CYJ03_RS06495;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_065520395.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	25333	26085	.	+	.	ID=gene-CYJ03_RS06500;Name=CYJ03_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06500;old_locus_tag=CYJ03_006490
NZ_PJUP02000014.1	Protein Homology	CDS	25333	26085	.	+	0	ID=cds-WP_104052244.1;Parent=gene-CYJ03_RS06500;Dbxref=GenBank:WP_104052244.1;Name=WP_104052244.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=CYJ03_RS06500;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_104052244.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	26290	26718	.	+	.	ID=gene-CYJ03_RS06505;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06505;old_locus_tag=CYJ03_006495
NZ_PJUP02000014.1	Protein Homology	CDS	26290	26718	.	+	0	ID=cds-WP_014613253.1;Parent=gene-CYJ03_RS06505;Dbxref=GenBank:WP_014613253.1;Name=WP_014613253.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=CYJ03_RS06505;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_014613253.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	26734	27249	.	+	.	ID=gene-CYJ03_RS06510;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06510;old_locus_tag=CYJ03_006500
NZ_PJUP02000014.1	Protein Homology	CDS	26734	27249	.	+	0	ID=cds-WP_014613254.1;Parent=gene-CYJ03_RS06510;Dbxref=GenBank:WP_014613254.1;Name=WP_014613254.1;Ontology_term=GO:0005990,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CYJ03_RS06510;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_014613254.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	27320	28288	.	+	.	ID=gene-CYJ03_RS06515;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06515;old_locus_tag=CYJ03_006505
NZ_PJUP02000014.1	Protein Homology	CDS	27320	28288	.	+	0	ID=cds-WP_015729497.1;Parent=gene-CYJ03_RS06515;Dbxref=GenBank:WP_015729497.1;Name=WP_015729497.1;Ontology_term=GO:0005990,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=CYJ03_RS06515;product=tagatose-bisphosphate aldolase;protein_id=WP_015729497.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	28314	28628	.	+	.	ID=gene-CYJ03_RS06520;Name=CYJ03_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06520;old_locus_tag=CYJ03_006510
NZ_PJUP02000014.1	Protein Homology	CDS	28314	28628	.	+	0	ID=cds-WP_014613256.1;Parent=gene-CYJ03_RS06520;Dbxref=GenBank:WP_014613256.1;Name=WP_014613256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=CYJ03_RS06520;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_014613256.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	28634	30358	.	+	.	ID=gene-CYJ03_RS06525;Name=CYJ03_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06525;old_locus_tag=CYJ03_006515
NZ_PJUP02000014.1	Protein Homology	CDS	28634	30358	.	+	0	ID=cds-WP_063278949.1;Parent=gene-CYJ03_RS06525;Dbxref=GenBank:WP_063278949.1;Name=WP_063278949.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=CYJ03_RS06525;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_063278949.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	30376	31782	.	+	.	ID=gene-CYJ03_RS06530;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=CYJ03_RS06530;old_locus_tag=CYJ03_006520
NZ_PJUP02000014.1	Protein Homology	CDS	30376	31782	.	+	0	ID=cds-WP_104052245.1;Parent=gene-CYJ03_RS06530;Dbxref=GenBank:WP_104052245.1;Name=WP_104052245.1;Ontology_term=GO:0005990,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613258.1;locus_tag=CYJ03_RS06530;product=6-phospho-beta-galactosidase;protein_id=WP_104052245.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	32012	36016	.	+	.	ID=gene-CYJ03_RS06535;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=CYJ03_RS06535;old_locus_tag=CYJ03_006525
NZ_PJUP02000014.1	Protein Homology	CDS	32012	36016	.	+	0	ID=cds-WP_101457463.1;Parent=gene-CYJ03_RS06535;Dbxref=GenBank:WP_101457463.1;Name=WP_101457463.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613259.1;locus_tag=CYJ03_RS06535;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_101457463.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	36057	36281	.	+	.	ID=gene-CYJ03_RS12570;Name=CYJ03_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12570
NZ_PJUP02000014.1	GeneMarkS-2+	CDS	36057	36281	.	+	0	ID=cds-WP_258058101.1;Parent=gene-CYJ03_RS12570;Dbxref=GenBank:WP_258058101.1;Name=WP_258058101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12570;product=CRISPR-associated endonuclease Cas1;protein_id=WP_258058101.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	36282	36881	.	+	.	ID=gene-CYJ03_RS06540;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=CYJ03_RS06540;old_locus_tag=CYJ03_006530
NZ_PJUP02000014.1	Protein Homology	CDS	36282	36881	.	+	0	ID=cds-WP_258058102.1;Parent=gene-CYJ03_RS06540;Dbxref=GenBank:WP_258058102.1;Name=WP_258058102.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: protein motif:HMM:TIGR03639.1;locus_tag=CYJ03_RS06540;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_258058102.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	36962	37255	.	+	.	ID=gene-CYJ03_RS06545;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CYJ03_RS06545;old_locus_tag=CYJ03_006535
NZ_PJUP02000014.1	Protein Homology	CDS	36962	37255	.	+	0	ID=cds-WP_014613261.1;Parent=gene-CYJ03_RS06545;Dbxref=GenBank:WP_014613261.1;Name=WP_014613261.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01573.1;locus_tag=CYJ03_RS06545;product=CRISPR-associated endonuclease Cas2;protein_id=WP_014613261.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	37252	38100	.	+	.	ID=gene-CYJ03_RS06550;Name=CYJ03_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06550;old_locus_tag=CYJ03_006540
NZ_PJUP02000014.1	Protein Homology	CDS	37252	38100	.	+	0	ID=cds-WP_104052246.1;Parent=gene-CYJ03_RS06550;Dbxref=GenBank:WP_104052246.1;Name=WP_104052246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613262.1;locus_tag=CYJ03_RS06550;product=hypothetical protein;protein_id=WP_104052246.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	direct_repeat	38281	39497	.	+	.	ID=id-NZ_PJUP02000014.1:38281..39497;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=38610..38645;rpt_unit_seq=gttttagcactatgtttatttagaaagaagtaaaac
NZ_PJUP02000014.1	RefSeq	gene	39665	40675	.	+	.	ID=gene-CYJ03_RS06555;Name=CYJ03_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06555;old_locus_tag=CYJ03_006545
NZ_PJUP02000014.1	Protein Homology	CDS	39665	40675	.	+	0	ID=cds-WP_104052247.1;Parent=gene-CYJ03_RS06555;Dbxref=GenBank:WP_104052247.1;Name=WP_104052247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=CYJ03_RS06555;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_104052247.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	40732	42246	.	+	.	ID=gene-CYJ03_RS06560;Name=CYJ03_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06560;old_locus_tag=CYJ03_006550
NZ_PJUP02000014.1	Protein Homology	CDS	40732	42246	.	+	0	ID=cds-WP_099986748.1;Parent=gene-CYJ03_RS06560;Dbxref=GenBank:WP_099986748.1;Name=WP_099986748.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169143.1;locus_tag=CYJ03_RS06560;product=BCCT family transporter;protein_id=WP_099986748.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	42535	43077	.	+	.	ID=gene-CYJ03_RS06565;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=CYJ03_RS06565;old_locus_tag=CYJ03_006555
NZ_PJUP02000014.1	Protein Homology	CDS	42535	43077	.	+	0	ID=cds-WP_063284742.1;Parent=gene-CYJ03_RS06565;Dbxref=GenBank:WP_063284742.1;Name=WP_063284742.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=CYJ03_RS06565;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_063284742.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	43090	43335	.	+	.	ID=gene-CYJ03_RS06570;Name=CYJ03_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06570;old_locus_tag=CYJ03_006560
NZ_PJUP02000014.1	Protein Homology	CDS	43090	43335	.	+	0	ID=cds-WP_014613266.1;Parent=gene-CYJ03_RS06570;Dbxref=GenBank:WP_014613266.1;Name=WP_014613266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426388.1;locus_tag=CYJ03_RS06570;product=DUF2273 domain-containing protein;protein_id=WP_014613266.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	43389	43880	.	+	.	ID=gene-CYJ03_RS06575;Name=CYJ03_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06575;old_locus_tag=CYJ03_006565
NZ_PJUP02000014.1	Protein Homology	CDS	43389	43880	.	+	0	ID=cds-WP_014613267.1;Parent=gene-CYJ03_RS06575;Dbxref=GenBank:WP_014613267.1;Name=WP_014613267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CYJ03_RS06575;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613267.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	43952	45097	.	-	.	ID=gene-CYJ03_RS06580;Name=CYJ03_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06580;old_locus_tag=CYJ03_006570
NZ_PJUP02000014.1	Protein Homology	CDS	43952	45097	.	-	0	ID=cds-WP_037542474.1;Parent=gene-CYJ03_RS06580;Dbxref=GenBank:WP_037542474.1;Name=WP_037542474.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613268.1;locus_tag=CYJ03_RS06580;product=MFS transporter;protein_id=WP_037542474.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	45209	47176	.	-	.	ID=gene-CYJ03_RS06585;Name=CYJ03_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06585;old_locus_tag=CYJ03_006575
NZ_PJUP02000014.1	Protein Homology	CDS	45209	47176	.	-	0	ID=cds-WP_037542477.1;Parent=gene-CYJ03_RS06585;Dbxref=GenBank:WP_037542477.1;Name=WP_037542477.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729487.1;locus_tag=CYJ03_RS06585;product=IucA/IucC family protein;protein_id=WP_037542477.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	47277	48461	.	+	.	ID=gene-CYJ03_RS06590;Name=CYJ03_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06590;old_locus_tag=CYJ03_006580
NZ_PJUP02000014.1	Protein Homology	CDS	47277	48461	.	+	0	ID=cds-WP_065520400.1;Parent=gene-CYJ03_RS06590;Dbxref=GenBank:WP_065520400.1;Name=WP_065520400.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613270.1;locus_tag=CYJ03_RS06590;product=MFS transporter;protein_id=WP_065520400.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	48445	50208	.	+	.	ID=gene-CYJ03_RS06595;Name=CYJ03_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06595;old_locus_tag=CYJ03_006585
NZ_PJUP02000014.1	Protein Homology	CDS	48445	50208	.	+	0	ID=cds-WP_015729485.1;Parent=gene-CYJ03_RS06595;Dbxref=GenBank:WP_015729485.1;Name=WP_015729485.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=CYJ03_RS06595;product=IucA/IucC family protein;protein_id=WP_015729485.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	50212	51288	.	+	.	ID=gene-CYJ03_RS06600;Name=CYJ03_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06600;old_locus_tag=CYJ03_006590
NZ_PJUP02000014.1	Protein Homology	CDS	50212	51288	.	+	0	ID=cds-WP_065520402.1;Parent=gene-CYJ03_RS06600;Dbxref=GenBank:WP_065520402.1;Name=WP_065520402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=CYJ03_RS06600;product=alanine racemase;protein_id=WP_065520402.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	51358	52347	.	+	.	ID=gene-CYJ03_RS06605;Name=CYJ03_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06605;old_locus_tag=CYJ03_006595
NZ_PJUP02000014.1	Protein Homology	CDS	51358	52347	.	+	0	ID=cds-WP_014613273.1;Parent=gene-CYJ03_RS06605;Dbxref=GenBank:WP_014613273.1;Name=WP_014613273.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168333.1;locus_tag=CYJ03_RS06605;product=ABC transporter substrate-binding protein;protein_id=WP_014613273.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	52491	53516	.	+	.	ID=gene-CYJ03_RS06610;Name=CYJ03_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06610;old_locus_tag=CYJ03_006600
NZ_PJUP02000014.1	Protein Homology	CDS	52491	53516	.	+	0	ID=cds-WP_014613274.1;Parent=gene-CYJ03_RS06610;Dbxref=GenBank:WP_014613274.1;Name=WP_014613274.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165080.1;locus_tag=CYJ03_RS06610;product=FecCD family ABC transporter permease;protein_id=WP_014613274.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	53513	54475	.	+	.	ID=gene-CYJ03_RS06615;Name=CYJ03_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06615;old_locus_tag=CYJ03_006605
NZ_PJUP02000014.1	Protein Homology	CDS	53513	54475	.	+	0	ID=cds-WP_014613275.1;Parent=gene-CYJ03_RS06615;Dbxref=GenBank:WP_014613275.1;Name=WP_014613275.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613275.1;locus_tag=CYJ03_RS06615;product=FecCD family ABC transporter permease;protein_id=WP_014613275.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	54596	55966	.	+	.	ID=gene-CYJ03_RS06620;Name=CYJ03_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06620;old_locus_tag=CYJ03_006610
NZ_PJUP02000014.1	Protein Homology	CDS	54596	55966	.	+	0	ID=cds-WP_014613276.1;Parent=gene-CYJ03_RS06620;Dbxref=GenBank:WP_014613276.1;Name=WP_014613276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613276.1;locus_tag=CYJ03_RS06620;product=YjiH family protein;protein_id=WP_014613276.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	56450	56710	.	-	.	ID=gene-CYJ03_RS06625;Name=CYJ03_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06625;old_locus_tag=CYJ03_006615
NZ_PJUP02000014.1	Protein Homology	CDS	56450	56710	.	-	0	ID=cds-WP_014613277.1;Parent=gene-CYJ03_RS06625;Dbxref=GenBank:WP_014613277.1;Name=WP_014613277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722958.1;locus_tag=CYJ03_RS06625;product=SunI/YnzG family protein;protein_id=WP_014613277.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	56900	57406	.	+	.	ID=gene-CYJ03_RS06630;Name=CYJ03_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06630;old_locus_tag=CYJ03_006620
NZ_PJUP02000014.1	Protein Homology	CDS	56900	57406	.	+	0	ID=cds-WP_014613278.1;Parent=gene-CYJ03_RS06630;Dbxref=GenBank:WP_014613278.1;Name=WP_014613278.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=CYJ03_RS06630;product=metal-dependent hydrolase;protein_id=WP_014613278.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	57479	58669	.	+	.	ID=gene-CYJ03_RS06635;Name=CYJ03_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06635;old_locus_tag=CYJ03_006625
NZ_PJUP02000014.1	Protein Homology	CDS	57479	58669	.	+	0	ID=cds-WP_014613279.1;Parent=gene-CYJ03_RS06635;Dbxref=GenBank:WP_014613279.1;Name=WP_014613279.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613279.1;locus_tag=CYJ03_RS06635;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_014613279.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	58680	59360	.	+	.	ID=gene-CYJ03_RS06640;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06640;old_locus_tag=CYJ03_006630
NZ_PJUP02000014.1	Protein Homology	CDS	58680	59360	.	+	0	ID=cds-WP_014613280.1;Parent=gene-CYJ03_RS06640;Dbxref=GenBank:WP_014613280.1;Name=WP_014613280.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=CYJ03_RS06640;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_014613280.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	59373	59570	.	+	.	ID=gene-CYJ03_RS06645;Name=CYJ03_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06645;old_locus_tag=CYJ03_006635
NZ_PJUP02000014.1	Protein Homology	CDS	59373	59570	.	+	0	ID=cds-WP_014613281.1;Parent=gene-CYJ03_RS06645;Dbxref=GenBank:WP_014613281.1;Name=WP_014613281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729476.1;locus_tag=CYJ03_RS06645;product=hypothetical protein;protein_id=WP_014613281.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	60123	61466	.	+	.	ID=gene-CYJ03_RS06650;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=CYJ03_RS06650;old_locus_tag=CYJ03_006640
NZ_PJUP02000014.1	Protein Homology	CDS	60123	61466	.	+	0	ID=cds-WP_063279141.1;Parent=gene-CYJ03_RS06650;Dbxref=GenBank:WP_063279141.1;Name=WP_063279141.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165088.1;locus_tag=CYJ03_RS06650;product=multidrug efflux MFS transporter SdrM;protein_id=WP_063279141.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	61492	61953	.	+	.	ID=gene-CYJ03_RS06655;Name=CYJ03_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06655;old_locus_tag=CYJ03_006645
NZ_PJUP02000014.1	Protein Homology	CDS	61492	61953	.	+	0	ID=cds-WP_014613283.1;Parent=gene-CYJ03_RS06655;Dbxref=GenBank:WP_014613283.1;Name=WP_014613283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168476.1;locus_tag=CYJ03_RS06655;product=SepA family multidrug efflux transporter;protein_id=WP_014613283.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	62059	63507	.	+	.	ID=gene-CYJ03_RS06660;Name=CYJ03_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06660;old_locus_tag=CYJ03_006650
NZ_PJUP02000014.1	Protein Homology	CDS	62059	63507	.	+	0	ID=cds-WP_101457455.1;Parent=gene-CYJ03_RS06660;Dbxref=GenBank:WP_101457455.1;Name=WP_101457455.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168477.1;locus_tag=CYJ03_RS06660;product=MDR family MFS transporter;protein_id=WP_101457455.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	63826	64890	.	+	.	ID=gene-CYJ03_RS06665;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06665;old_locus_tag=CYJ03_006655
NZ_PJUP02000014.1	Protein Homology	CDS	63826	64890	.	+	0	ID=cds-WP_065520406.1;Parent=gene-CYJ03_RS06665;Dbxref=GenBank:WP_065520406.1;Name=WP_065520406.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=CYJ03_RS06665;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=WP_065520406.1;transl_table=11
NZ_PJUP02000014.1	RefSeq	gene	65420	65658	.	+	.	ID=gene-CYJ03_RS12410;Name=CYJ03_RS12410;end_range=65658,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12410;partial=true
NZ_PJUP02000014.1	cmsearch	rRNA	65420	65658	.	+	.	ID=rna-CYJ03_RS12410;Parent=gene-CYJ03_RS12410;Dbxref=RFAM:RF00177;end_range=65658,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12410;partial=true;product=16S ribosomal RNA
NZ_PJUP02000014.1	cmsearch	exon	65420	65658	.	+	.	ID=exon-CYJ03_RS12410-1;Parent=rna-CYJ03_RS12410;Dbxref=RFAM:RF00177;end_range=65658,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12410;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUP02000017.1 1 50984
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000017.1	RefSeq	region	1	50984	.	+	.	ID=NZ_PJUP02000017.1:1..50984;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000017.1	RefSeq	pseudogene	2	266	.	+	.	ID=gene-CYJ03_RS07205;Name=CYJ03_RS07205;end_range=266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07205;old_locus_tag=CYJ03_007195;partial=true;pseudo=true
NZ_PJUP02000017.1	Protein Homology	CDS	2	266	.	+	0	ID=cds-CYJ03_RS07205;Parent=gene-CYJ03_RS07205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000105,GO:0004635,GO:0046872;end_range=266,.;gbkey=CDS;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,metal ion binding|0046872||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=CYJ03_RS07205;partial=true;product=phosphoribosyl-AMP cyclohydrolase;pseudo=true;transl_table=11
NZ_PJUP02000017.1	RefSeq	pseudogene	423	704	.	-	.	ID=gene-CYJ03_RS07210;Name=CYJ03_RS07210;end_range=704,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07210;old_locus_tag=CYJ03_007200;partial=true;pseudo=true;start_range=.,423
NZ_PJUP02000017.1	Protein Homology	CDS	423	704	.	-	0	ID=cds-CYJ03_RS07210;Parent=gene-CYJ03_RS07210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975,GO:0003824;end_range=704,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220085.1;locus_tag=CYJ03_RS07210;partial=true;product=alpha-amylase family glycosyl hydrolase;pseudo=true;start_range=.,423;transl_table=11
NZ_PJUP02000017.1	RefSeq	pseudogene	1031	1165	.	-	.	ID=gene-CYJ03_RS12835;Name=CYJ03_RS12835;end_range=1165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12835;old_locus_tag=CYJ03_007210;partial=true;pseudo=true;start_range=.,1031
NZ_PJUP02000017.1	Protein Homology	CDS	1031	1165	.	-	0	ID=cds-CYJ03_RS12835;Parent=gene-CYJ03_RS12835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612947.1;locus_tag=CYJ03_RS12835;partial=true;product=lipase-like domain-containing protein;pseudo=true;start_range=.,1031;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	1481	1756	.	-	.	ID=gene-CYJ03_RS07225;Name=CYJ03_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07225;old_locus_tag=CYJ03_007215
NZ_PJUP02000017.1	Protein Homology	CDS	1481	1756	.	-	0	ID=cds-WP_014614943.1;Parent=gene-CYJ03_RS07225;Dbxref=GenBank:WP_014614943.1;Name=WP_014614943.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168313.1;locus_tag=CYJ03_RS07225;product=GNAT family N-acetyltransferase;protein_id=WP_014614943.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	1923	2348	.	+	.	ID=gene-CYJ03_RS07230;Name=CYJ03_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07230;old_locus_tag=CYJ03_007220
NZ_PJUP02000017.1	Protein Homology	CDS	1923	2348	.	+	0	ID=cds-WP_014614944.1;Parent=gene-CYJ03_RS07230;Dbxref=GenBank:WP_014614944.1;Name=WP_014614944.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614944.1;locus_tag=CYJ03_RS07230;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014614944.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	2431	3393	.	+	.	ID=gene-CYJ03_RS07235;Name=CYJ03_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07235;old_locus_tag=CYJ03_007225
NZ_PJUP02000017.1	Protein Homology	CDS	2431	3393	.	+	0	ID=cds-WP_104052262.1;Parent=gene-CYJ03_RS07235;Dbxref=GenBank:WP_104052262.1;Name=WP_104052262.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614945.1;locus_tag=CYJ03_RS07235;product=ring-cleaving dioxygenase;protein_id=WP_104052262.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	3439	4056	.	+	.	ID=gene-CYJ03_RS07240;Name=CYJ03_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07240;old_locus_tag=CYJ03_007230
NZ_PJUP02000017.1	Protein Homology	CDS	3439	4056	.	+	0	ID=cds-WP_014614946.1;Parent=gene-CYJ03_RS07240;Dbxref=GenBank:WP_014614946.1;Name=WP_014614946.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=CYJ03_RS07240;product=flavin reductase family protein;protein_id=WP_014614946.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	4078	4665	.	+	.	ID=gene-CYJ03_RS07245;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=CYJ03_RS07245;old_locus_tag=CYJ03_007235
NZ_PJUP02000017.1	Protein Homology	CDS	4078	4665	.	+	0	ID=cds-WP_104052263.1;Parent=gene-CYJ03_RS07245;Dbxref=GenBank:WP_104052263.1;Name=WP_104052263.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=CYJ03_RS07245;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_104052263.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	4729	5232	.	-	.	ID=gene-CYJ03_RS07250;Name=CYJ03_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07250;old_locus_tag=CYJ03_007240
NZ_PJUP02000017.1	Protein Homology	CDS	4729	5232	.	-	0	ID=cds-WP_063284536.1;Parent=gene-CYJ03_RS07250;Dbxref=GenBank:WP_063284536.1;Name=WP_063284536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614948.1;locus_tag=CYJ03_RS07250;product=hypothetical protein;protein_id=WP_063284536.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	5239	5427	.	-	.	ID=gene-CYJ03_RS07255;Name=CYJ03_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07255;old_locus_tag=CYJ03_007245
NZ_PJUP02000017.1	Protein Homology	CDS	5239	5427	.	-	0	ID=cds-WP_080552883.1;Parent=gene-CYJ03_RS07255;Dbxref=GenBank:WP_080552883.1;Name=WP_080552883.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469691.1;locus_tag=CYJ03_RS07255;product=helix-turn-helix transcriptional regulator;protein_id=WP_080552883.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	5576	5890	.	-	.	ID=gene-CYJ03_RS07260;Name=CYJ03_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07260;old_locus_tag=CYJ03_007250
NZ_PJUP02000017.1	Protein Homology	CDS	5576	5890	.	-	0	ID=cds-WP_015728504.1;Parent=gene-CYJ03_RS07260;Dbxref=GenBank:WP_015728504.1;Name=WP_015728504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728504.1;locus_tag=CYJ03_RS07260;product=hypothetical protein;protein_id=WP_015728504.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	6528	7379	.	-	.	ID=gene-CYJ03_RS07265;Name=CYJ03_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07265;old_locus_tag=CYJ03_007255
NZ_PJUP02000017.1	Protein Homology	CDS	6528	7379	.	-	0	ID=cds-WP_014614952.1;Parent=gene-CYJ03_RS07265;Dbxref=GenBank:WP_014614952.1;Name=WP_014614952.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=CYJ03_RS07265;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014614952.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	7417	8136	.	-	.	ID=gene-CYJ03_RS07270;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CYJ03_RS07270;old_locus_tag=CYJ03_007260
NZ_PJUP02000017.1	Protein Homology	CDS	7417	8136	.	-	0	ID=cds-WP_014614953.1;Parent=gene-CYJ03_RS07270;Dbxref=GenBank:WP_014614953.1;Name=WP_014614953.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=CYJ03_RS07270;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_014614953.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	8137	10011	.	-	.	ID=gene-CYJ03_RS07275;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CYJ03_RS07275;old_locus_tag=CYJ03_007265
NZ_PJUP02000017.1	Protein Homology	CDS	8137	10011	.	-	0	ID=cds-WP_015728502.1;Parent=gene-CYJ03_RS07275;Dbxref=GenBank:WP_015728502.1;Name=WP_015728502.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=CYJ03_RS07275;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_015728502.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	10030	11412	.	-	.	ID=gene-CYJ03_RS07280;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CYJ03_RS07280;old_locus_tag=CYJ03_007270
NZ_PJUP02000017.1	Protein Homology	CDS	10030	11412	.	-	0	ID=cds-WP_015728501.1;Parent=gene-CYJ03_RS07280;Dbxref=GenBank:WP_015728501.1;Name=WP_015728501.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=CYJ03_RS07280;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_015728501.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	11586	11933	.	-	.	ID=gene-CYJ03_RS07285;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07285;old_locus_tag=CYJ03_007275
NZ_PJUP02000017.1	Protein Homology	CDS	11586	11933	.	-	0	ID=cds-WP_015728500.1;Parent=gene-CYJ03_RS07285;Dbxref=GenBank:WP_015728500.1;Name=WP_015728500.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=CYJ03_RS07285;product=ribonuclease P protein component;protein_id=WP_015728500.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	12107	12244	.	-	.	ID=gene-CYJ03_RS07290;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CYJ03_RS07290;old_locus_tag=CYJ03_007280
NZ_PJUP02000017.1	Protein Homology	CDS	12107	12244	.	-	0	ID=cds-WP_000240855.1;Parent=gene-CYJ03_RS07290;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CYJ03_RS07290;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	12788	14131	.	+	.	ID=gene-CYJ03_RS07295;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07295;old_locus_tag=CYJ03_007285
NZ_PJUP02000017.1	Protein Homology	CDS	12788	14131	.	+	0	ID=cds-WP_099986593.1;Parent=gene-CYJ03_RS07295;Dbxref=GenBank:WP_099986593.1;Name=WP_099986593.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168324.1;locus_tag=CYJ03_RS07295;product=chromosomal replication initiator protein DnaA;protein_id=WP_099986593.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	14303	15436	.	+	.	ID=gene-CYJ03_RS07300;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CYJ03_RS07300;old_locus_tag=CYJ03_007290
NZ_PJUP02000017.1	Protein Homology	CDS	14303	15436	.	+	0	ID=cds-WP_014612662.1;Parent=gene-CYJ03_RS07300;Dbxref=GenBank:WP_014612662.1;Name=WP_014612662.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CYJ03_RS07300;product=DNA polymerase III subunit beta;protein_id=WP_014612662.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	15719	16408	.	+	.	ID=gene-CYJ03_RS07305;Name=CYJ03_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07305;old_locus_tag=CYJ03_007295
NZ_PJUP02000017.1	Protein Homology	CDS	15719	16408	.	+	0	ID=cds-WP_104052264.1;Parent=gene-CYJ03_RS07305;Dbxref=GenBank:WP_104052264.1;Name=WP_104052264.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729834.1;locus_tag=CYJ03_RS07305;product=DsbA family protein;protein_id=WP_104052264.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	16528	16767	.	+	.	ID=gene-CYJ03_RS07310;Name=CYJ03_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07310;old_locus_tag=CYJ03_007300
NZ_PJUP02000017.1	Protein Homology	CDS	16528	16767	.	+	0	ID=cds-WP_019166052.1;Parent=gene-CYJ03_RS07310;Dbxref=GenBank:WP_019166052.1;Name=WP_019166052.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425730.1;locus_tag=CYJ03_RS07310;product=RNA-binding S4 domain-containing protein;protein_id=WP_019166052.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	16764	17879	.	+	.	ID=gene-CYJ03_RS07315;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CYJ03_RS07315;old_locus_tag=CYJ03_007305
NZ_PJUP02000017.1	Protein Homology	CDS	16764	17879	.	+	0	ID=cds-WP_014612665.1;Parent=gene-CYJ03_RS07315;Dbxref=GenBank:WP_014612665.1;Name=WP_014612665.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169017.1;locus_tag=CYJ03_RS07315;product=DNA replication/repair protein RecF;protein_id=WP_014612665.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	17893	19824	.	+	.	ID=gene-CYJ03_RS07320;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07320;old_locus_tag=CYJ03_007310
NZ_PJUP02000017.1	Protein Homology	CDS	17893	19824	.	+	0	ID=cds-WP_373366349.1;Parent=gene-CYJ03_RS07320;Dbxref=GenBank:WP_373366349.1;Name=WP_373366349.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=CYJ03_RS07320;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_373366349.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	19860	22496	.	+	.	ID=gene-CYJ03_RS07325;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07325;old_locus_tag=CYJ03_007315
NZ_PJUP02000017.1	Protein Homology	CDS	19860	22496	.	+	0	ID=cds-WP_070407307.1;Parent=gene-CYJ03_RS07325;Dbxref=GenBank:WP_070407307.1;Name=WP_070407307.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729832.1;locus_tag=CYJ03_RS07325;product=DNA gyrase subunit A;protein_id=WP_070407307.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	22746	23561	.	-	.	ID=gene-CYJ03_RS07330;Name=CYJ03_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07330;old_locus_tag=CYJ03_007320
NZ_PJUP02000017.1	Protein Homology	CDS	22746	23561	.	-	0	ID=cds-WP_014612668.1;Parent=gene-CYJ03_RS07330;Dbxref=GenBank:WP_014612668.1;Name=WP_014612668.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612668.1;locus_tag=CYJ03_RS07330;product=NAD(P)H-hydrate dehydratase;protein_id=WP_014612668.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	23911	25413	.	+	.	ID=gene-CYJ03_RS07335;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CYJ03_RS07335;old_locus_tag=CYJ03_007325
NZ_PJUP02000017.1	Protein Homology	CDS	23911	25413	.	+	0	ID=cds-WP_104052265.1;Parent=gene-CYJ03_RS07335;Dbxref=GenBank:WP_104052265.1;Name=WP_104052265.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729831.1;locus_tag=CYJ03_RS07335;product=histidine ammonia-lyase;protein_id=WP_104052265.1;transl_table=11
NZ_PJUP02000017.1	cmsearch	binding_site	25461	25656	.	+	.	ID=id-NZ_PJUP02000017.1:25461..25656;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000017.1	RefSeq	gene	25731	27011	.	+	.	ID=gene-CYJ03_RS07340;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07340;old_locus_tag=CYJ03_007330
NZ_PJUP02000017.1	Protein Homology	CDS	25731	27011	.	+	0	ID=cds-WP_015729830.1;Parent=gene-CYJ03_RS07340;Dbxref=GenBank:WP_015729830.1;Name=WP_015729830.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=CYJ03_RS07340;product=serine--tRNA ligase;protein_id=WP_015729830.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	27325	28017	.	+	.	ID=gene-CYJ03_RS07345;Name=CYJ03_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07345;old_locus_tag=CYJ03_007335
NZ_PJUP02000017.1	Protein Homology	CDS	27325	28017	.	+	0	ID=cds-WP_014612671.1;Parent=gene-CYJ03_RS07345;Dbxref=GenBank:WP_014612671.1;Name=WP_014612671.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498766.1;locus_tag=CYJ03_RS07345;product=AzlC family ABC transporter permease;protein_id=WP_014612671.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	28014	28343	.	+	.	ID=gene-CYJ03_RS07350;Name=CYJ03_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07350;old_locus_tag=CYJ03_007340
NZ_PJUP02000017.1	Protein Homology	CDS	28014	28343	.	+	0	ID=cds-WP_104052266.1;Parent=gene-CYJ03_RS07350;Dbxref=GenBank:WP_104052266.1;Name=WP_104052266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166060.1;locus_tag=CYJ03_RS07350;product=branched-chain amino acid transport AzlD family protein;protein_id=WP_104052266.1;transl_table=11
NZ_PJUP02000017.1	cmsearch	riboswitch	28410	28514	.	+	.	ID=id-NZ_PJUP02000017.1:28410..28514;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000017.1	RefSeq	gene	28598	29563	.	+	.	ID=gene-CYJ03_RS07355;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=CYJ03_RS07355;old_locus_tag=CYJ03_007345
NZ_PJUP02000017.1	Protein Homology	CDS	28598	29563	.	+	0	ID=cds-WP_014612673.1;Parent=gene-CYJ03_RS07355;Dbxref=GenBank:WP_014612673.1;Name=WP_014612673.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=CYJ03_RS07355;product=homoserine O-acetyltransferase MetX;protein_id=WP_014612673.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	29795	30706	.	+	.	ID=gene-CYJ03_RS07360;Name=CYJ03_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07360;old_locus_tag=CYJ03_007350
NZ_PJUP02000017.1	Protein Homology	CDS	29795	30706	.	+	0	ID=cds-WP_099986601.1;Parent=gene-CYJ03_RS07360;Dbxref=GenBank:WP_099986601.1;Name=WP_099986601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=CYJ03_RS07360;product=DUF2232 domain-containing protein;protein_id=WP_099986601.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	30711	32678	.	+	.	ID=gene-CYJ03_RS07365;Name=CYJ03_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07365;old_locus_tag=CYJ03_007355
NZ_PJUP02000017.1	Protein Homology	CDS	30711	32678	.	+	0	ID=cds-WP_014612675.1;Parent=gene-CYJ03_RS07365;Dbxref=GenBank:WP_014612675.1;Name=WP_014612675.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CYJ03_RS07365;product=DHH family phosphoesterase;protein_id=WP_014612675.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	32675	33121	.	+	.	ID=gene-CYJ03_RS07370;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CYJ03_RS07370;old_locus_tag=CYJ03_007360
NZ_PJUP02000017.1	Protein Homology	CDS	32675	33121	.	+	0	ID=cds-WP_014612676.1;Parent=gene-CYJ03_RS07370;Dbxref=GenBank:WP_014612676.1;Name=WP_014612676.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=CYJ03_RS07370;product=50S ribosomal protein L9;protein_id=WP_014612676.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	33223	33426	.	+	.	ID=gene-CYJ03_RS12435;Name=CYJ03_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12435;old_locus_tag=CYJ03_007365
NZ_PJUP02000017.1	Protein Homology	CDS	33223	33426	.	+	0	ID=cds-WP_104052267.1;Parent=gene-CYJ03_RS12435;Dbxref=GenBank:WP_104052267.1;Name=WP_104052267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=CYJ03_RS12435;product=DUF6007 family protein;protein_id=WP_104052267.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	33582	34982	.	+	.	ID=gene-CYJ03_RS07380;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07380;old_locus_tag=CYJ03_007370
NZ_PJUP02000017.1	Protein Homology	CDS	33582	34982	.	+	0	ID=cds-WP_014612677.1;Parent=gene-CYJ03_RS07380;Dbxref=GenBank:WP_014612677.1;Name=WP_014612677.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=CYJ03_RS07380;product=replicative DNA helicase;protein_id=WP_014612677.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	35354	36637	.	+	.	ID=gene-CYJ03_RS07385;Name=CYJ03_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07385;old_locus_tag=CYJ03_007375
NZ_PJUP02000017.1	Protein Homology	CDS	35354	36637	.	+	0	ID=cds-WP_037541991.1;Parent=gene-CYJ03_RS07385;Dbxref=GenBank:WP_037541991.1;Name=WP_037541991.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CYJ03_RS07385;product=adenylosuccinate synthase;protein_id=WP_037541991.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	36856	37749	.	-	.	ID=gene-CYJ03_RS07390;Name=CYJ03_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07390;old_locus_tag=CYJ03_007380
NZ_PJUP02000017.1	Protein Homology	CDS	36856	37749	.	-	0	ID=cds-WP_014612679.1;Parent=gene-CYJ03_RS07390;Dbxref=GenBank:WP_014612679.1;Name=WP_014612679.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729824.1;locus_tag=CYJ03_RS07390;product=YitT family protein;protein_id=WP_014612679.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	37856	37930	.	+	.	ID=gene-CYJ03_RS07395;Name=CYJ03_RS07395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS07395;old_locus_tag=CYJ03_007385
NZ_PJUP02000017.1	tRNAscan-SE	tRNA	37856	37930	.	+	.	ID=rna-CYJ03_RS07395;Parent=gene-CYJ03_RS07395;anticodon=(pos:37889..37891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS07395;product=tRNA-Glu
NZ_PJUP02000017.1	tRNAscan-SE	exon	37856	37930	.	+	.	ID=exon-CYJ03_RS07395-1;Parent=rna-CYJ03_RS07395;anticodon=(pos:37889..37891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS07395;product=tRNA-Glu
NZ_PJUP02000017.1	RefSeq	gene	37937	38010	.	+	.	ID=gene-CYJ03_RS07400;Name=CYJ03_RS07400;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS07400;old_locus_tag=CYJ03_007390
NZ_PJUP02000017.1	tRNAscan-SE	tRNA	37937	38010	.	+	.	ID=rna-CYJ03_RS07400;Parent=gene-CYJ03_RS07400;anticodon=(pos:37971..37973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS07400;product=tRNA-Asp
NZ_PJUP02000017.1	tRNAscan-SE	exon	37937	38010	.	+	.	ID=exon-CYJ03_RS07400-1;Parent=rna-CYJ03_RS07400;anticodon=(pos:37971..37973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS07400;product=tRNA-Asp
NZ_PJUP02000017.1	RefSeq	gene	38449	38787	.	+	.	ID=gene-CYJ03_RS07405;Name=CYJ03_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07405;old_locus_tag=CYJ03_007395
NZ_PJUP02000017.1	Protein Homology	CDS	38449	38787	.	+	0	ID=cds-WP_063278701.1;Parent=gene-CYJ03_RS07405;Dbxref=GenBank:WP_063278701.1;Name=WP_063278701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729823.1;locus_tag=CYJ03_RS07405;product=SdpI family protein;protein_id=WP_063278701.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	38938	39639	.	+	.	ID=gene-CYJ03_RS07410;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=CYJ03_RS07410;old_locus_tag=CYJ03_007400
NZ_PJUP02000017.1	Protein Homology	CDS	38938	39639	.	+	0	ID=cds-WP_014612681.1;Parent=gene-CYJ03_RS07410;Dbxref=GenBank:WP_014612681.1;Name=WP_014612681.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=CYJ03_RS07410;product=response regulator YycF;protein_id=WP_014612681.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	39652	41484	.	+	.	ID=gene-CYJ03_RS07415;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=CYJ03_RS07415;old_locus_tag=CYJ03_007405
NZ_PJUP02000017.1	Protein Homology	CDS	39652	41484	.	+	0	ID=cds-WP_014612682.1;Parent=gene-CYJ03_RS07415;Dbxref=GenBank:WP_014612682.1;Name=WP_014612682.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612682.1;locus_tag=CYJ03_RS07415;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_014612682.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	41474	42811	.	+	.	ID=gene-CYJ03_RS07420;Name=CYJ03_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07420;old_locus_tag=CYJ03_007410
NZ_PJUP02000017.1	Protein Homology	CDS	41474	42811	.	+	0	ID=cds-WP_014612683.1;Parent=gene-CYJ03_RS07420;Dbxref=GenBank:WP_014612683.1;Name=WP_014612683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=CYJ03_RS07420;product=YycH family regulatory protein;protein_id=WP_014612683.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	42808	43587	.	+	.	ID=gene-CYJ03_RS07425;Name=CYJ03_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07425;old_locus_tag=CYJ03_007415
NZ_PJUP02000017.1	Protein Homology	CDS	42808	43587	.	+	0	ID=cds-WP_014612684.1;Parent=gene-CYJ03_RS07425;Dbxref=GenBank:WP_014612684.1;Name=WP_014612684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=CYJ03_RS07425;product=two-component system regulatory protein YycI;protein_id=WP_014612684.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	43610	44392	.	+	.	ID=gene-CYJ03_RS07430;Name=CYJ03_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07430;old_locus_tag=CYJ03_007420
NZ_PJUP02000017.1	Protein Homology	CDS	43610	44392	.	+	0	ID=cds-WP_037541999.1;Parent=gene-CYJ03_RS07430;Dbxref=GenBank:WP_037541999.1;Name=WP_037541999.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=CYJ03_RS07430;product=MBL fold metallo-hydrolase;protein_id=WP_037541999.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	45106	45585	.	+	.	ID=gene-CYJ03_RS07435;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CYJ03_RS07435;old_locus_tag=CYJ03_007425
NZ_PJUP02000017.1	Protein Homology	CDS	45106	45585	.	+	0	ID=cds-WP_104052268.1;Parent=gene-CYJ03_RS07435;Dbxref=GenBank:WP_104052268.1;Name=WP_104052268.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CYJ03_RS07435;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_104052268.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	45662	46993	.	+	.	ID=gene-CYJ03_RS07440;Name=CYJ03_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07440;old_locus_tag=CYJ03_007430
NZ_PJUP02000017.1	Protein Homology	CDS	45662	46993	.	+	0	ID=cds-WP_219821866.1;Parent=gene-CYJ03_RS07440;Dbxref=GenBank:WP_219821866.1;Name=WP_219821866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044296.4;locus_tag=CYJ03_RS07440;product=phospholipase D-like domain-containing protein;protein_id=WP_219821866.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	47155	48381	.	+	.	ID=gene-CYJ03_RS07445;Name=CYJ03_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07445;old_locus_tag=CYJ03_007435
NZ_PJUP02000017.1	Protein Homology	CDS	47155	48381	.	+	0	ID=cds-WP_104052270.1;Parent=gene-CYJ03_RS07445;Dbxref=GenBank:WP_104052270.1;Name=WP_104052270.1;Ontology_term=GO:0009307,GO:0032259,GO:0003677,GO:0003886,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006364291.1;locus_tag=CYJ03_RS07445;product=DNA cytosine methyltransferase;protein_id=WP_104052270.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	48736	48933	.	+	.	ID=gene-CYJ03_RS12600;Name=CYJ03_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12600
NZ_PJUP02000017.1	GeneMarkS-2+	CDS	48736	48933	.	+	0	ID=cds-WP_258058106.1;Parent=gene-CYJ03_RS12600;Dbxref=GenBank:WP_258058106.1;Name=WP_258058106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12600;product=hypothetical protein;protein_id=WP_258058106.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	48948	49148	.	+	.	ID=gene-CYJ03_RS12605;Name=CYJ03_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12605
NZ_PJUP02000017.1	Protein Homology	CDS	48948	49148	.	+	0	ID=cds-WP_258058107.1;Parent=gene-CYJ03_RS12605;Dbxref=GenBank:WP_258058107.1;Name=WP_258058107.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=CYJ03_RS12605;product=hypothetical protein;protein_id=WP_258058107.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	pseudogene	49582	50153	.	+	.	ID=gene-CYJ03_RS07460;Name=CYJ03_RS07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07460;old_locus_tag=CYJ03_007450;pseudo=true
NZ_PJUP02000017.1	Protein Homology	CDS	49582	50153	.	+	0	ID=cds-CYJ03_RS07460;Parent=gene-CYJ03_RS07460;Note=frameshifted;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=CYJ03_RS07460;product=trypsin-like serine peptidase;pseudo=true;transl_table=11
NZ_PJUP02000017.1	RefSeq	gene	50332	50607	.	-	.	ID=gene-CYJ03_RS07465;Name=CYJ03_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07465;old_locus_tag=CYJ03_007455
NZ_PJUP02000017.1	GeneMarkS-2+	CDS	50332	50607	.	-	0	ID=cds-WP_258058108.1;Parent=gene-CYJ03_RS07465;Dbxref=GenBank:WP_258058108.1;Name=WP_258058108.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS07465;product=helix-turn-helix domain-containing protein;protein_id=WP_258058108.1;transl_table=11
NZ_PJUP02000017.1	RefSeq	pseudogene	50652	50843	.	-	.	ID=gene-CYJ03_RS07470;Name=CYJ03_RS07470;end_range=50843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07470;old_locus_tag=CYJ03_007460;partial=true;pseudo=true;start_range=.,50652
NZ_PJUP02000017.1	Protein Homology	CDS	50652	50843	.	-	0	ID=cds-CYJ03_RS07470;Parent=gene-CYJ03_RS07470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0003824;end_range=50843,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CYJ03_RS07470;partial=true;product=IMP dehydrogenase;pseudo=true;start_range=.,50652;transl_table=11
##sequence-region NZ_PJUP02000015.1 1 58423
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000015.1	RefSeq	region	1	58423	.	+	.	ID=NZ_PJUP02000015.1:1..58423;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000015.1	RefSeq	pseudogene	152	340	.	+	.	ID=gene-CYJ03_RS06670;Name=CYJ03_RS06670;end_range=340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS06670;old_locus_tag=CYJ03_006660;partial=true;pseudo=true;start_range=.,152
NZ_PJUP02000015.1	Protein Homology	CDS	152	340	.	+	0	ID=cds-CYJ03_RS06670;Parent=gene-CYJ03_RS06670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=CYJ03_RS06670;partial=true;product=nucleoside recognition domain-containing protein;pseudo=true;start_range=.,152;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	488	2041	.	+	.	ID=gene-CYJ03_RS06675;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CYJ03_RS06675;old_locus_tag=CYJ03_006665
NZ_PJUP02000015.1	Protein Homology	CDS	488	2041	.	+	0	ID=cds-WP_020219895.1;Parent=gene-CYJ03_RS06675;Dbxref=GenBank:WP_020219895.1;Name=WP_020219895.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219895.1;locus_tag=CYJ03_RS06675;product=sodium/proline symporter PutP;protein_id=WP_020219895.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	2430	3635	.	-	.	ID=gene-CYJ03_RS06680;Name=CYJ03_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06680;old_locus_tag=CYJ03_006670
NZ_PJUP02000015.1	Protein Homology	CDS	2430	3635	.	-	0	ID=cds-WP_014613456.1;Parent=gene-CYJ03_RS06680;Dbxref=GenBank:WP_014613456.1;Name=WP_014613456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664913.1;locus_tag=CYJ03_RS06680;product=CamS family sex pheromone protein;protein_id=WP_014613456.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	3647	5650	.	-	.	ID=gene-CYJ03_RS06685;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06685;old_locus_tag=CYJ03_006675
NZ_PJUP02000015.1	Protein Homology	CDS	3647	5650	.	-	0	ID=cds-WP_101457317.1;Parent=gene-CYJ03_RS06685;Dbxref=GenBank:WP_101457317.1;Name=WP_101457317.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166445.1;locus_tag=CYJ03_RS06685;product=NAD-dependent DNA ligase LigA;protein_id=WP_101457317.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	5654	7849	.	-	.	ID=gene-CYJ03_RS06690;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06690;old_locus_tag=CYJ03_006680
NZ_PJUP02000015.1	Protein Homology	CDS	5654	7849	.	-	0	ID=cds-WP_065520431.1;Parent=gene-CYJ03_RS06690;Dbxref=GenBank:WP_065520431.1;Name=WP_065520431.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=CYJ03_RS06690;product=DNA helicase PcrA;protein_id=WP_065520431.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	7849	8538	.	-	.	ID=gene-CYJ03_RS06695;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06695;old_locus_tag=CYJ03_006685
NZ_PJUP02000015.1	Protein Homology	CDS	7849	8538	.	-	0	ID=cds-WP_014613453.1;Parent=gene-CYJ03_RS06695;Dbxref=GenBank:WP_014613453.1;Name=WP_014613453.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=CYJ03_RS06695;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_014613453.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	9470	9772	.	-	.	ID=gene-CYJ03_RS06700;Name=CYJ03_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06700;old_locus_tag=CYJ03_006690
NZ_PJUP02000015.1	Protein Homology	CDS	9470	9772	.	-	0	ID=cds-WP_014613451.1;Parent=gene-CYJ03_RS06700;Dbxref=GenBank:WP_014613451.1;Name=WP_014613451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166442.1;locus_tag=CYJ03_RS06700;product=YerC/YecD family TrpR-related protein;protein_id=WP_014613451.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	9840	11135	.	-	.	ID=gene-CYJ03_RS06705;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06705;old_locus_tag=CYJ03_006695
NZ_PJUP02000015.1	Protein Homology	CDS	9840	11135	.	-	0	ID=cds-WP_101457316.1;Parent=gene-CYJ03_RS06705;Dbxref=GenBank:WP_101457316.1;Name=WP_101457316.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275349.1;locus_tag=CYJ03_RS06705;product=adenylosuccinate lyase;protein_id=WP_101457316.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	11558	11746	.	-	.	ID=gene-CYJ03_RS06710;Name=CYJ03_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06710;old_locus_tag=CYJ03_006700
NZ_PJUP02000015.1	Protein Homology	CDS	11558	11746	.	-	0	ID=cds-WP_014613449.1;Parent=gene-CYJ03_RS06710;Dbxref=GenBank:WP_014613449.1;Name=WP_014613449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166440.1;locus_tag=CYJ03_RS06710;product=NETI motif-containing protein;protein_id=WP_014613449.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	11736	12305	.	-	.	ID=gene-CYJ03_RS06715;Name=CYJ03_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06715;old_locus_tag=CYJ03_006705
NZ_PJUP02000015.1	Protein Homology	CDS	11736	12305	.	-	0	ID=cds-WP_014613448.1;Parent=gene-CYJ03_RS06715;Dbxref=GenBank:WP_014613448.1;Name=WP_014613448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=CYJ03_RS06715;product=DUF2179 domain-containing protein;protein_id=WP_014613448.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	12367	13197	.	-	.	ID=gene-CYJ03_RS06720;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CYJ03_RS06720;old_locus_tag=CYJ03_006710
NZ_PJUP02000015.1	Protein Homology	CDS	12367	13197	.	-	0	ID=cds-WP_037544162.1;Parent=gene-CYJ03_RS06720;Dbxref=GenBank:WP_037544162.1;Name=WP_037544162.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169336.1;locus_tag=CYJ03_RS06720;product=NAD(+) synthase;protein_id=WP_037544162.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	13190	14665	.	-	.	ID=gene-CYJ03_RS06725;Name=CYJ03_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06725;old_locus_tag=CYJ03_006715
NZ_PJUP02000015.1	Protein Homology	CDS	13190	14665	.	-	0	ID=cds-WP_101457315.1;Parent=gene-CYJ03_RS06725;Dbxref=GenBank:WP_101457315.1;Name=WP_101457315.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169335.1;locus_tag=CYJ03_RS06725;product=nicotinate phosphoribosyltransferase;protein_id=WP_101457315.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	15297	16367	.	+	.	ID=gene-CYJ03_RS06730;Name=CYJ03_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06730;old_locus_tag=CYJ03_006720
NZ_PJUP02000015.1	Protein Homology	CDS	15297	16367	.	+	0	ID=cds-WP_101457314.1;Parent=gene-CYJ03_RS06730;Dbxref=GenBank:WP_101457314.1;Name=WP_101457314.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=CYJ03_RS06730;product=nitric oxide synthase oxygenase;protein_id=WP_101457314.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	16411	17214	.	+	.	ID=gene-CYJ03_RS06735;Name=CYJ03_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06735;old_locus_tag=CYJ03_006725
NZ_PJUP02000015.1	Protein Homology	CDS	16411	17214	.	+	0	ID=cds-WP_014613444.1;Parent=gene-CYJ03_RS06735;Dbxref=GenBank:WP_014613444.1;Name=WP_014613444.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804670.1;locus_tag=CYJ03_RS06735;product=prephenate dehydratase;protein_id=WP_014613444.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	17267	18373	.	-	.	ID=gene-CYJ03_RS06740;Name=CYJ03_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06740;old_locus_tag=CYJ03_006730
NZ_PJUP02000015.1	Protein Homology	CDS	17267	18373	.	-	0	ID=cds-WP_101457313.1;Parent=gene-CYJ03_RS06740;Dbxref=GenBank:WP_101457313.1;Name=WP_101457313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613443.1;locus_tag=CYJ03_RS06740;product=glycosyl hydrolase family 28-related protein;protein_id=WP_101457313.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	18454	19005	.	+	.	ID=gene-CYJ03_RS06745;Name=CYJ03_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06745;old_locus_tag=CYJ03_006735
NZ_PJUP02000015.1	Protein Homology	CDS	18454	19005	.	+	0	ID=cds-WP_014613442.1;Parent=gene-CYJ03_RS06745;Dbxref=GenBank:WP_014613442.1;Name=WP_014613442.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=CYJ03_RS06745;product=cysteine hydrolase family protein;protein_id=WP_014613442.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	19063	19989	.	+	.	ID=gene-CYJ03_RS06750;Name=CYJ03_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06750;old_locus_tag=CYJ03_006740
NZ_PJUP02000015.1	Protein Homology	CDS	19063	19989	.	+	0	ID=cds-WP_172425815.1;Parent=gene-CYJ03_RS06750;Dbxref=GenBank:WP_172425815.1;Name=WP_172425815.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445415.1;locus_tag=CYJ03_RS06750;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_172425815.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	20019	20300	.	+	.	ID=gene-CYJ03_RS06755;Name=CYJ03_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06755;old_locus_tag=CYJ03_006745
NZ_PJUP02000015.1	Protein Homology	CDS	20019	20300	.	+	0	ID=cds-WP_014613440.1;Parent=gene-CYJ03_RS06755;Dbxref=GenBank:WP_014613440.1;Name=WP_014613440.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166431.1;locus_tag=CYJ03_RS06755;product=GNAT family N-acetyltransferase;protein_id=WP_014613440.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	20570	21949	.	+	.	ID=gene-CYJ03_RS06760;Name=CYJ03_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06760;old_locus_tag=CYJ03_006750
NZ_PJUP02000015.1	Protein Homology	CDS	20570	21949	.	+	0	ID=cds-WP_014613439.1;Parent=gene-CYJ03_RS06760;Dbxref=GenBank:WP_014613439.1;Name=WP_014613439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219898.1;locus_tag=CYJ03_RS06760;product=aldehyde dehydrogenase;protein_id=WP_014613439.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	22056	23105	.	-	.	ID=gene-CYJ03_RS06765;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=CYJ03_RS06765;old_locus_tag=CYJ03_006755
NZ_PJUP02000015.1	Protein Homology	CDS	22056	23105	.	-	0	ID=cds-WP_101457312.1;Parent=gene-CYJ03_RS06765;Dbxref=GenBank:WP_101457312.1;Name=WP_101457312.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169327.1;locus_tag=CYJ03_RS06765;product=6-phosphogluconolactonase;protein_id=WP_101457312.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	23324	23497	.	-	.	ID=gene-CYJ03_RS12290;Name=CYJ03_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12290
NZ_PJUP02000015.1	Protein Homology	CDS	23324	23497	.	-	0	ID=cds-WP_014613437.1;Parent=gene-CYJ03_RS12290;Dbxref=GenBank:WP_014613437.1;Name=WP_014613437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613437.1;locus_tag=CYJ03_RS12290;product=hypothetical protein;protein_id=WP_014613437.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	23664	24053	.	+	.	ID=gene-CYJ03_RS06770;Name=CYJ03_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06770;old_locus_tag=CYJ03_006760
NZ_PJUP02000015.1	Protein Homology	CDS	23664	24053	.	+	0	ID=cds-WP_014613436.1;Parent=gene-CYJ03_RS06770;Dbxref=GenBank:WP_014613436.1;Name=WP_014613436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=CYJ03_RS06770;product=hypothetical protein;protein_id=WP_014613436.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	24766	25809	.	+	.	ID=gene-CYJ03_RS06775;Name=CYJ03_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06775;old_locus_tag=CYJ03_006765
NZ_PJUP02000015.1	Protein Homology	CDS	24766	25809	.	+	0	ID=cds-WP_015729403.1;Parent=gene-CYJ03_RS06775;Dbxref=GenBank:WP_015729403.1;Name=WP_015729403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613435.1;locus_tag=CYJ03_RS06775;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_015729403.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	25911	26753	.	-	.	ID=gene-CYJ03_RS06780;Name=CYJ03_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06780;old_locus_tag=CYJ03_006770
NZ_PJUP02000015.1	Protein Homology	CDS	25911	26753	.	-	0	ID=cds-WP_014613434.1;Parent=gene-CYJ03_RS06780;Dbxref=GenBank:WP_014613434.1;Name=WP_014613434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169323.1;locus_tag=CYJ03_RS06780;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_014613434.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	26750	27313	.	-	.	ID=gene-CYJ03_RS06785;Name=CYJ03_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06785;old_locus_tag=CYJ03_006775
NZ_PJUP02000015.1	Protein Homology	CDS	26750	27313	.	-	0	ID=cds-WP_014613433.1;Parent=gene-CYJ03_RS06785;Dbxref=GenBank:WP_014613433.1;Name=WP_014613433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=CYJ03_RS06785;product=HAAS signaling domain-containing protein;protein_id=WP_014613433.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	27493	28050	.	+	.	ID=gene-CYJ03_RS06790;Name=CYJ03_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06790;old_locus_tag=CYJ03_006780
NZ_PJUP02000015.1	Protein Homology	CDS	27493	28050	.	+	0	ID=cds-WP_101457311.1;Parent=gene-CYJ03_RS06790;Dbxref=GenBank:WP_101457311.1;Name=WP_101457311.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166424.1;locus_tag=CYJ03_RS06790;product=thioredoxin family protein;protein_id=WP_101457311.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	28138	29499	.	-	.	ID=gene-CYJ03_RS06795;Name=CYJ03_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06795;old_locus_tag=CYJ03_006785
NZ_PJUP02000015.1	Protein Homology	CDS	28138	29499	.	-	0	ID=cds-WP_014613431.1;Parent=gene-CYJ03_RS06795;Dbxref=GenBank:WP_014613431.1;Name=WP_014613431.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=CYJ03_RS06795;product=gluconate:H+ symporter;protein_id=WP_014613431.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	29510	31060	.	-	.	ID=gene-CYJ03_RS06800;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CYJ03_RS06800;old_locus_tag=CYJ03_006790
NZ_PJUP02000015.1	Protein Homology	CDS	29510	31060	.	-	0	ID=cds-WP_014613430.1;Parent=gene-CYJ03_RS06800;Dbxref=GenBank:WP_014613430.1;Name=WP_014613430.1;Ontology_term=GO:0019521,GO:0061678,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=D-gluconate metabolic process|0019521||IEA,Entner-Doudoroff pathway|0061678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166422.1;locus_tag=CYJ03_RS06800;product=gluconokinase;protein_id=WP_014613430.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	31084	31761	.	-	.	ID=gene-CYJ03_RS06805;Name=CYJ03_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06805;old_locus_tag=CYJ03_006795
NZ_PJUP02000015.1	Protein Homology	CDS	31084	31761	.	-	0	ID=cds-WP_014613429.1;Parent=gene-CYJ03_RS06805;Dbxref=GenBank:WP_014613429.1;Name=WP_014613429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=CYJ03_RS06805;product=GntR family transcriptional regulator;protein_id=WP_014613429.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	32179	32907	.	-	.	ID=gene-CYJ03_RS06810;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06810;old_locus_tag=CYJ03_006800
NZ_PJUP02000015.1	Protein Homology	CDS	32179	32907	.	-	0	ID=cds-WP_101457310.1;Parent=gene-CYJ03_RS06810;Dbxref=GenBank:WP_101457310.1;Name=WP_101457310.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613428.1;locus_tag=CYJ03_RS06810;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_101457310.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	32904	33779	.	-	.	ID=gene-CYJ03_RS06815;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06815;old_locus_tag=CYJ03_006805
NZ_PJUP02000015.1	Protein Homology	CDS	32904	33779	.	-	0	ID=cds-WP_014613427.1;Parent=gene-CYJ03_RS06815;Dbxref=GenBank:WP_014613427.1;Name=WP_014613427.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166419.1;locus_tag=CYJ03_RS06815;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_014613427.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	34223	34396	.	-	.	ID=gene-CYJ03_RS12295;Name=CYJ03_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12295
NZ_PJUP02000015.1	Protein Homology	CDS	34223	34396	.	-	0	ID=cds-WP_014613426.1;Parent=gene-CYJ03_RS12295;Dbxref=GenBank:WP_014613426.1;Name=WP_014613426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166418.1;locus_tag=CYJ03_RS12295;product=SE1626 family protein;protein_id=WP_014613426.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	34655	34786	.	-	.	ID=gene-CYJ03_RS12575;Name=CYJ03_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12575
NZ_PJUP02000015.1	Protein Homology	CDS	34655	34786	.	-	0	ID=cds-WP_020219903.1;Parent=gene-CYJ03_RS12575;Dbxref=GenBank:WP_020219903.1;Name=WP_020219903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047567.1;locus_tag=CYJ03_RS12575;product=Trp-rich small protein;protein_id=WP_020219903.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	34999	36288	.	+	.	ID=gene-CYJ03_RS06820;Name=CYJ03_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06820;old_locus_tag=CYJ03_006810
NZ_PJUP02000015.1	Protein Homology	CDS	34999	36288	.	+	0	ID=cds-WP_104052248.1;Parent=gene-CYJ03_RS06820;Dbxref=GenBank:WP_104052248.1;Name=WP_104052248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=CYJ03_RS06820;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_104052248.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	36347	37171	.	+	.	ID=gene-CYJ03_RS06825;Name=CYJ03_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06825;old_locus_tag=CYJ03_006815
NZ_PJUP02000015.1	Protein Homology	CDS	36347	37171	.	+	0	ID=cds-WP_014613424.1;Parent=gene-CYJ03_RS06825;Dbxref=GenBank:WP_014613424.1;Name=WP_014613424.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=CYJ03_RS06825;product=SPL family radical SAM protein;protein_id=WP_014613424.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	37187	37708	.	+	.	ID=gene-CYJ03_RS06830;Name=CYJ03_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06830;old_locus_tag=CYJ03_006820
NZ_PJUP02000015.1	Protein Homology	CDS	37187	37708	.	+	0	ID=cds-WP_063285013.1;Parent=gene-CYJ03_RS06830;Dbxref=GenBank:WP_063285013.1;Name=WP_063285013.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613423.1;locus_tag=CYJ03_RS06830;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_063285013.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	37689	38921	.	+	.	ID=gene-CYJ03_RS06835;Name=CYJ03_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06835;old_locus_tag=CYJ03_006825
NZ_PJUP02000015.1	Protein Homology	CDS	37689	38921	.	+	0	ID=cds-WP_063285014.1;Parent=gene-CYJ03_RS06835;Dbxref=GenBank:WP_063285014.1;Name=WP_063285014.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166413.1;locus_tag=CYJ03_RS06835;product=acetylornithine deacetylase;protein_id=WP_063285014.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	39149	39850	.	-	.	ID=gene-CYJ03_RS06840;Name=CYJ03_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06840;old_locus_tag=CYJ03_006830
NZ_PJUP02000015.1	Protein Homology	CDS	39149	39850	.	-	0	ID=cds-WP_104052249.1;Parent=gene-CYJ03_RS06840;Dbxref=GenBank:WP_104052249.1;Name=WP_104052249.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729408.1;locus_tag=CYJ03_RS06840;product=S8 family serine peptidase;protein_id=WP_104052249.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	39837	40442	.	-	.	ID=gene-CYJ03_RS06845;Name=CYJ03_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06845;old_locus_tag=CYJ03_006835
NZ_PJUP02000015.1	Protein Homology	CDS	39837	40442	.	-	0	ID=cds-WP_015729409.1;Parent=gene-CYJ03_RS06845;Dbxref=GenBank:WP_015729409.1;Name=WP_015729409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368755.1;locus_tag=CYJ03_RS06845;product=DUF3885 domain-containing protein;protein_id=WP_015729409.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	pseudogene	40457	41086	.	-	.	ID=gene-CYJ03_RS12415;Name=CYJ03_RS12415;end_range=41086,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12415;partial=true;pseudo=true
NZ_PJUP02000015.1	Protein Homology	CDS	40457	41086	.	-	0	ID=cds-CYJ03_RS12415;Parent=gene-CYJ03_RS12415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708297.1;locus_tag=CYJ03_RS12415;partial=true;product=SAR2788 family putative toxin;pseudo=true;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	41753	43372	.	-	.	ID=gene-CYJ03_RS06860;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CYJ03_RS06860;old_locus_tag=CYJ03_006850
NZ_PJUP02000015.1	Protein Homology	CDS	41753	43372	.	-	0	ID=cds-WP_019167564.1;Parent=gene-CYJ03_RS06860;Dbxref=GenBank:WP_019167564.1;Name=WP_019167564.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CYJ03_RS06860;product=chaperonin GroEL;protein_id=WP_019167564.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	43421	43708	.	-	.	ID=gene-CYJ03_RS06865;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=CYJ03_RS06865;old_locus_tag=CYJ03_006855
NZ_PJUP02000015.1	Protein Homology	CDS	43421	43708	.	-	0	ID=cds-WP_015729412.1;Parent=gene-CYJ03_RS06865;Dbxref=GenBank:WP_015729412.1;Name=WP_015729412.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=CYJ03_RS06865;product=co-chaperone GroES;protein_id=WP_015729412.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	43878	44645	.	+	.	ID=gene-CYJ03_RS06870;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS06870;old_locus_tag=CYJ03_006860
NZ_PJUP02000015.1	Protein Homology	CDS	43878	44645	.	+	0	ID=cds-WP_104052250.1;Parent=gene-CYJ03_RS06870;Dbxref=GenBank:WP_104052250.1;Name=WP_104052250.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166409.1;locus_tag=CYJ03_RS06870;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_104052250.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	44757	46118	.	-	.	ID=gene-CYJ03_RS06875;Name=CYJ03_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06875;old_locus_tag=CYJ03_006865
NZ_PJUP02000015.1	Protein Homology	CDS	44757	46118	.	-	0	ID=cds-WP_104052251.1;Parent=gene-CYJ03_RS06875;Dbxref=GenBank:WP_104052251.1;Name=WP_104052251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613417.1;locus_tag=CYJ03_RS06875;product=SdrH family protein;protein_id=WP_104052251.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	46283	47086	.	+	.	ID=gene-CYJ03_RS06880;Name=CYJ03_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06880;old_locus_tag=CYJ03_006870
NZ_PJUP02000015.1	Protein Homology	CDS	46283	47086	.	+	0	ID=cds-WP_014613416.1;Parent=gene-CYJ03_RS06880;Dbxref=GenBank:WP_014613416.1;Name=WP_014613416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=CYJ03_RS06880;product=carbon-nitrogen family hydrolase;protein_id=WP_014613416.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	47374	47451	.	-	.	ID=gene-CYJ03_RS12820;Name=CYJ03_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12820
NZ_PJUP02000015.1	Protein Homology	CDS	47374	47451	.	-	0	ID=cds-WP_126511050.1;Parent=gene-CYJ03_RS12820;Dbxref=GenBank:WP_126511050.1;Name=WP_126511050.1;Note=Members of this family are produced with retention of the N-formyl-methionine at the N-terminus.;Ontology_term=GO:0019836,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: protein motif:HMM:NF017210.7;locus_tag=CYJ03_RS12820;product=delta-lysin family phenol-soluble modulin;protein_id=WP_126511050.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	47843	48409	.	+	.	ID=gene-CYJ03_RS06885;Name=CYJ03_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06885;old_locus_tag=CYJ03_006875
NZ_PJUP02000015.1	Protein Homology	CDS	47843	48409	.	+	0	ID=cds-WP_096636794.1;Parent=gene-CYJ03_RS06885;Dbxref=GenBank:WP_096636794.1;Name=WP_096636794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613414.1;locus_tag=CYJ03_RS06885;product=accessory gene regulator AgrB;protein_id=WP_096636794.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	48411	48548	.	+	.	ID=gene-CYJ03_RS06890;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06890;old_locus_tag=CYJ03_006880
NZ_PJUP02000015.1	Protein Homology	CDS	48411	48548	.	+	0	ID=cds-WP_019166405.1;Parent=gene-CYJ03_RS06890;Dbxref=GenBank:WP_019166405.1;Name=WP_019166405.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=CYJ03_RS06890;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_019166405.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	48571	49863	.	+	.	ID=gene-CYJ03_RS12825;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=CYJ03_RS12825;old_locus_tag=CYJ03_006885
NZ_PJUP02000015.1	Protein Homology	CDS	48571	49863	.	+	0	ID=cds-WP_104052252.1;Parent=gene-CYJ03_RS12825;Dbxref=GenBank:WP_104052252.1;Name=WP_104052252.1;gbkey=CDS;gene=agrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729415.1;locus_tag=CYJ03_RS12825;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_104052252.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	49877	50593	.	+	.	ID=gene-CYJ03_RS06900;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06900;old_locus_tag=CYJ03_006890
NZ_PJUP02000015.1	Protein Homology	CDS	49877	50593	.	+	0	ID=cds-WP_014613411.1;Parent=gene-CYJ03_RS06900;Dbxref=GenBank:WP_014613411.1;Name=WP_014613411.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CYJ03_RS06900;product=quorum-sensing response regulator AgrA;protein_id=WP_014613411.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	50653	51597	.	-	.	ID=gene-CYJ03_RS06905;Name=CYJ03_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06905;old_locus_tag=CYJ03_006895
NZ_PJUP02000015.1	Protein Homology	CDS	50653	51597	.	-	0	ID=cds-WP_104052253.1;Parent=gene-CYJ03_RS06905;Dbxref=GenBank:WP_104052253.1;Name=WP_104052253.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166402.1;locus_tag=CYJ03_RS06905;product=carbohydrate kinase family protein;protein_id=WP_104052253.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	51601	53085	.	-	.	ID=gene-CYJ03_RS06910;Name=CYJ03_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06910;old_locus_tag=CYJ03_006900
NZ_PJUP02000015.1	Protein Homology	CDS	51601	53085	.	-	0	ID=cds-WP_104052254.1;Parent=gene-CYJ03_RS06910;Dbxref=GenBank:WP_104052254.1;Name=WP_104052254.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613409.1;locus_tag=CYJ03_RS06910;product=sucrose-6-phosphate hydrolase;protein_id=WP_104052254.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	53141	54088	.	-	.	ID=gene-CYJ03_RS06915;Name=CYJ03_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06915;old_locus_tag=CYJ03_006905
NZ_PJUP02000015.1	Protein Homology	CDS	53141	54088	.	-	0	ID=cds-WP_104052255.1;Parent=gene-CYJ03_RS06915;Dbxref=GenBank:WP_104052255.1;Name=WP_104052255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613408.1;locus_tag=CYJ03_RS06915;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_104052255.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	55083	56282	.	-	.	ID=gene-CYJ03_RS06925;Name=CYJ03_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06925;old_locus_tag=CYJ03_006915
NZ_PJUP02000015.1	Protein Homology	CDS	55083	56282	.	-	0	ID=cds-WP_014613407.1;Parent=gene-CYJ03_RS06925;Dbxref=GenBank:WP_014613407.1;Name=WP_014613407.1;Ontology_term=GO:0046148,GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;go_process=pigment biosynthetic process|0046148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613407.1;locus_tag=CYJ03_RS06925;product=cytochrome P450%2C cyclodipeptide synthase-associated;protein_id=WP_014613407.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	56266	56973	.	-	.	ID=gene-CYJ03_RS06930;Name=CYJ03_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06930;old_locus_tag=CYJ03_006920
NZ_PJUP02000015.1	Protein Homology	CDS	56266	56973	.	-	0	ID=cds-WP_037542576.1;Parent=gene-CYJ03_RS06930;Dbxref=GenBank:WP_037542576.1;Name=WP_037542576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276926.1;locus_tag=CYJ03_RS06930;product=tRNA-dependent cyclodipeptide synthase;protein_id=WP_037542576.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	57128	57607	.	+	.	ID=gene-CYJ03_RS06935;Name=CYJ03_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06935;old_locus_tag=CYJ03_006925
NZ_PJUP02000015.1	Protein Homology	CDS	57128	57607	.	+	0	ID=cds-WP_014613405.1;Parent=gene-CYJ03_RS06935;Dbxref=GenBank:WP_014613405.1;Name=WP_014613405.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613405.1;locus_tag=CYJ03_RS06935;product=MarR family transcriptional regulator;protein_id=WP_014613405.1;transl_table=11
NZ_PJUP02000015.1	RefSeq	gene	57585	58423	.	+	.	ID=gene-CYJ03_RS06940;Name=CYJ03_RS06940;end_range=58423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06940;old_locus_tag=CYJ03_006930;partial=true
NZ_PJUP02000015.1	Protein Homology	CDS	57585	58423	.	+	0	ID=cds-WP_104052256.1;Parent=gene-CYJ03_RS06940;Dbxref=GenBank:WP_104052256.1;Name=WP_104052256.1;Ontology_term=GO:0055085,GO:0022857;end_range=58423,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729417.1;locus_tag=CYJ03_RS06940;partial=true;product=MFS transporter;protein_id=WP_104052256.1;transl_table=11
##sequence-region NZ_PJUP02000018.1 1 49085
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000018.1	RefSeq	region	1	49085	.	+	.	ID=NZ_PJUP02000018.1:1..49085;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000018.1	RefSeq	pseudogene	30	191	.	-	.	ID=gene-CYJ03_RS07475;Name=CYJ03_RS07475;end_range=191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07475;old_locus_tag=CYJ03_007465;partial=true;pseudo=true
NZ_PJUP02000018.1	Protein Homology	CDS	30	191	.	-	0	ID=cds-CYJ03_RS07475;Parent=gene-CYJ03_RS07475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499414.1;locus_tag=CYJ03_RS07475;partial=true;product=lipoyl synthase;pseudo=true;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	282	1142	.	+	.	ID=gene-CYJ03_RS07480;Name=CYJ03_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07480;old_locus_tag=CYJ03_007470
NZ_PJUP02000018.1	Protein Homology	CDS	282	1142	.	+	0	ID=cds-WP_101457423.1;Parent=gene-CYJ03_RS07480;Dbxref=GenBank:WP_101457423.1;Name=WP_101457423.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729572.1;locus_tag=CYJ03_RS07480;product=AraC family transcriptional regulator;protein_id=WP_101457423.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	1314	2525	.	+	.	ID=gene-CYJ03_RS07485;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07485;old_locus_tag=CYJ03_007475
NZ_PJUP02000018.1	Protein Homology	CDS	1314	2525	.	+	0	ID=cds-WP_063278985.1;Parent=gene-CYJ03_RS07485;Dbxref=GenBank:WP_063278985.1;Name=WP_063278985.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=CYJ03_RS07485;product=sodium/glutamate symporter;protein_id=WP_063278985.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	2554	3759	.	-	.	ID=gene-CYJ03_RS07490;Name=CYJ03_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07490;old_locus_tag=CYJ03_007480
NZ_PJUP02000018.1	Protein Homology	CDS	2554	3759	.	-	0	ID=cds-WP_063278986.1;Parent=gene-CYJ03_RS07490;Dbxref=GenBank:WP_063278986.1;Name=WP_063278986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169589.1;locus_tag=CYJ03_RS07490;product=GTP-binding protein;protein_id=WP_063278986.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	3933	4964	.	-	.	ID=gene-CYJ03_RS07495;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=CYJ03_RS07495;old_locus_tag=CYJ03_007485
NZ_PJUP02000018.1	Protein Homology	CDS	3933	4964	.	-	0	ID=cds-WP_014613105.1;Parent=gene-CYJ03_RS07495;Dbxref=GenBank:WP_014613105.1;Name=WP_014613105.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=CYJ03_RS07495;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_014613105.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	5139	5615	.	+	.	ID=gene-CYJ03_RS07500;Name=CYJ03_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07500;old_locus_tag=CYJ03_007490
NZ_PJUP02000018.1	Protein Homology	CDS	5139	5615	.	+	0	ID=cds-WP_015729576.1;Parent=gene-CYJ03_RS07500;Dbxref=GenBank:WP_015729576.1;Name=WP_015729576.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729576.1;locus_tag=CYJ03_RS07500;product=thioesterase family protein;protein_id=WP_015729576.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	5674	6660	.	-	.	ID=gene-CYJ03_RS07505;Name=CYJ03_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07505;old_locus_tag=CYJ03_007495
NZ_PJUP02000018.1	Protein Homology	CDS	5674	6660	.	-	0	ID=cds-WP_225550179.1;Parent=gene-CYJ03_RS07505;Dbxref=GenBank:WP_225550179.1;Name=WP_225550179.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=CYJ03_RS07505;product=PTS sugar transporter subunit IIC;protein_id=WP_225550179.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	pseudogene	6623	6706	.	+	.	ID=gene-CYJ03_RS12610;Name=CYJ03_RS12610;end_range=6706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12610;partial=true;pseudo=true
NZ_PJUP02000018.1	Protein Homology	CDS	6623	6706	.	+	0	ID=cds-CYJ03_RS12610;Parent=gene-CYJ03_RS12610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=CYJ03_RS12610;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	7283	8185	.	-	.	ID=gene-CYJ03_RS07510;Name=CYJ03_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07510;old_locus_tag=CYJ03_007500
NZ_PJUP02000018.1	Protein Homology	CDS	7283	8185	.	-	0	ID=cds-WP_014613102.1;Parent=gene-CYJ03_RS07510;Dbxref=GenBank:WP_014613102.1;Name=WP_014613102.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613102.1;locus_tag=CYJ03_RS07510;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_014613102.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	8308	8643	.	-	.	ID=gene-CYJ03_RS07515;Name=CYJ03_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07515;old_locus_tag=CYJ03_007505
NZ_PJUP02000018.1	Protein Homology	CDS	8308	8643	.	-	0	ID=cds-WP_014613101.1;Parent=gene-CYJ03_RS07515;Dbxref=GenBank:WP_014613101.1;Name=WP_014613101.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613101.1;locus_tag=CYJ03_RS07515;product=thioredoxin family protein;protein_id=WP_014613101.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	8804	9436	.	+	.	ID=gene-CYJ03_RS07520;Name=CYJ03_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07520;old_locus_tag=CYJ03_007510
NZ_PJUP02000018.1	Protein Homology	CDS	8804	9436	.	+	0	ID=cds-WP_104052274.1;Parent=gene-CYJ03_RS07520;Dbxref=GenBank:WP_104052274.1;Name=WP_104052274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729578.1;locus_tag=CYJ03_RS07520;product=hypothetical protein;protein_id=WP_104052274.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	9562	10236	.	-	.	ID=gene-CYJ03_RS07525;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07525;old_locus_tag=CYJ03_007515
NZ_PJUP02000018.1	Protein Homology	CDS	9562	10236	.	-	0	ID=cds-WP_031253764.1;Parent=gene-CYJ03_RS07525;Dbxref=GenBank:WP_031253764.1;Name=WP_031253764.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613099.1;locus_tag=CYJ03_RS07525;product=thiaminase II;protein_id=WP_031253764.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	10330	10872	.	-	.	ID=gene-CYJ03_RS07530;Name=CYJ03_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07530;old_locus_tag=CYJ03_007520
NZ_PJUP02000018.1	Protein Homology	CDS	10330	10872	.	-	0	ID=cds-WP_037544134.1;Parent=gene-CYJ03_RS07530;Dbxref=GenBank:WP_037544134.1;Name=WP_037544134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613098.1;locus_tag=CYJ03_RS07530;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037544134.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	11350	12744	.	-	.	ID=gene-CYJ03_RS07535;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07535;old_locus_tag=CYJ03_007525
NZ_PJUP02000018.1	Protein Homology	CDS	11350	12744	.	-	0	ID=cds-WP_104052275.1;Parent=gene-CYJ03_RS07535;Dbxref=GenBank:WP_104052275.1;Name=WP_104052275.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=CYJ03_RS07535;product=membrane-associated protein TcaA;protein_id=WP_104052275.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	12851	13315	.	-	.	ID=gene-CYJ03_RS07540;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=CYJ03_RS07540;old_locus_tag=CYJ03_007530
NZ_PJUP02000018.1	Protein Homology	CDS	12851	13315	.	-	0	ID=cds-WP_014613096.1;Parent=gene-CYJ03_RS07540;Dbxref=GenBank:WP_014613096.1;Name=WP_014613096.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169579.1;locus_tag=CYJ03_RS07540;product=MarR family transcriptional regulator TcaR;protein_id=WP_014613096.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	13573	14409	.	+	.	ID=gene-CYJ03_RS07545;Name=CYJ03_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07545;old_locus_tag=CYJ03_007535
NZ_PJUP02000018.1	Protein Homology	CDS	13573	14409	.	+	0	ID=cds-WP_233511239.1;Parent=gene-CYJ03_RS07545;Dbxref=GenBank:WP_233511239.1;Name=WP_233511239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613095.1;locus_tag=CYJ03_RS07545;product=YdcF family protein;protein_id=WP_233511239.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	14540	14803	.	+	.	ID=gene-CYJ03_RS12210;Name=CYJ03_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12210
NZ_PJUP02000018.1	Protein Homology	CDS	14540	14803	.	+	0	ID=cds-WP_142389136.1;Parent=gene-CYJ03_RS12210;Dbxref=GenBank:WP_142389136.1;Name=WP_142389136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015746.7;locus_tag=CYJ03_RS12210;product=AbgT family transporter;protein_id=WP_142389136.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	14846	15535	.	-	.	ID=gene-CYJ03_RS07555;Name=CYJ03_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07555;old_locus_tag=CYJ03_007545
NZ_PJUP02000018.1	Protein Homology	CDS	14846	15535	.	-	0	ID=cds-WP_014613093.1;Parent=gene-CYJ03_RS07555;Dbxref=GenBank:WP_014613093.1;Name=WP_014613093.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165509.1;locus_tag=CYJ03_RS07555;product=ABC transporter ATP-binding protein;protein_id=WP_014613093.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	15532	16596	.	-	.	ID=gene-CYJ03_RS07560;Name=CYJ03_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07560;old_locus_tag=CYJ03_007550
NZ_PJUP02000018.1	Protein Homology	CDS	15532	16596	.	-	0	ID=cds-WP_099997363.1;Parent=gene-CYJ03_RS07560;Dbxref=GenBank:WP_099997363.1;Name=WP_099997363.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613092.1;locus_tag=CYJ03_RS07560;product=ABC transporter permease;protein_id=WP_099997363.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	17444	18121	.	+	.	ID=gene-CYJ03_RS07565;Name=CYJ03_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07565;old_locus_tag=CYJ03_007555
NZ_PJUP02000018.1	Protein Homology	CDS	17444	18121	.	+	0	ID=cds-WP_100040225.1;Parent=gene-CYJ03_RS07565;Dbxref=GenBank:WP_100040225.1;Name=WP_100040225.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=CYJ03_RS07565;product=response regulator transcription factor;protein_id=WP_100040225.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	18114	19538	.	+	.	ID=gene-CYJ03_RS07570;Name=CYJ03_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07570;old_locus_tag=CYJ03_007560
NZ_PJUP02000018.1	Protein Homology	CDS	18114	19538	.	+	0	ID=cds-WP_063284737.1;Parent=gene-CYJ03_RS07570;Dbxref=GenBank:WP_063284737.1;Name=WP_063284737.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219799.1;locus_tag=CYJ03_RS07570;product=sensor histidine kinase;protein_id=WP_063284737.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	19857	21362	.	-	.	ID=gene-CYJ03_RS07575;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CYJ03_RS07575;old_locus_tag=CYJ03_007565
NZ_PJUP02000018.1	Protein Homology	CDS	19857	21362	.	-	0	ID=cds-WP_100040224.1;Parent=gene-CYJ03_RS07575;Dbxref=GenBank:WP_100040224.1;Name=WP_100040224.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=CYJ03_RS07575;product=malate dehydrogenase (quinone);protein_id=WP_100040224.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	21789	22964	.	+	.	ID=gene-CYJ03_RS07580;Name=CYJ03_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07580;old_locus_tag=CYJ03_007570
NZ_PJUP02000018.1	Protein Homology	CDS	21789	22964	.	+	0	ID=cds-WP_104052276.1;Parent=gene-CYJ03_RS07580;Dbxref=GenBank:WP_104052276.1;Name=WP_104052276.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=CYJ03_RS07580;product=glycosyltransferase family 4 protein;protein_id=WP_104052276.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	23432	25036	.	-	.	ID=gene-CYJ03_RS07585;Name=CYJ03_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07585;old_locus_tag=CYJ03_007575
NZ_PJUP02000018.1	Protein Homology	CDS	23432	25036	.	-	0	ID=cds-WP_014613086.1;Parent=gene-CYJ03_RS07585;Dbxref=GenBank:WP_014613086.1;Name=WP_014613086.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165503.1;locus_tag=CYJ03_RS07585;product=L-lactate permease;protein_id=WP_014613086.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	25490	26194	.	-	.	ID=gene-CYJ03_RS07590;Name=CYJ03_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07590;old_locus_tag=CYJ03_007580
NZ_PJUP02000018.1	Protein Homology	CDS	25490	26194	.	-	0	ID=cds-WP_015729587.1;Parent=gene-CYJ03_RS07590;Dbxref=GenBank:WP_015729587.1;Name=WP_015729587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=CYJ03_RS07590;product=hypothetical protein;protein_id=WP_015729587.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	26299	26817	.	-	.	ID=gene-CYJ03_RS07595;Name=CYJ03_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07595;old_locus_tag=CYJ03_007585
NZ_PJUP02000018.1	Protein Homology	CDS	26299	26817	.	-	0	ID=cds-WP_065520368.1;Parent=gene-CYJ03_RS07595;Dbxref=GenBank:WP_065520368.1;Name=WP_065520368.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729588.1;locus_tag=CYJ03_RS07595;product=GNAT family N-acetyltransferase;protein_id=WP_065520368.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	26949	27944	.	+	.	ID=gene-CYJ03_RS07600;Name=CYJ03_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07600;old_locus_tag=CYJ03_007590
NZ_PJUP02000018.1	Protein Homology	CDS	26949	27944	.	+	0	ID=cds-WP_015729589.1;Parent=gene-CYJ03_RS07600;Dbxref=GenBank:WP_015729589.1;Name=WP_015729589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=CYJ03_RS07600;product=oxidoreductase;protein_id=WP_015729589.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	28181	29524	.	+	.	ID=gene-CYJ03_RS07605;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=CYJ03_RS07605;old_locus_tag=CYJ03_007595
NZ_PJUP02000018.1	Protein Homology	CDS	28181	29524	.	+	0	ID=cds-WP_014613082.1;Parent=gene-CYJ03_RS07605;Dbxref=GenBank:WP_014613082.1;Name=WP_014613082.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=CYJ03_RS07605;product=glucose transporter GlcP;protein_id=WP_014613082.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	29711	30739	.	+	.	ID=gene-CYJ03_RS07610;Name=CYJ03_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07610;old_locus_tag=CYJ03_007600
NZ_PJUP02000018.1	Protein Homology	CDS	29711	30739	.	+	0	ID=cds-WP_100040222.1;Parent=gene-CYJ03_RS07610;Dbxref=GenBank:WP_100040222.1;Name=WP_100040222.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165498.1;locus_tag=CYJ03_RS07610;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_100040222.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	30760	31176	.	+	.	ID=gene-CYJ03_RS07615;Name=CYJ03_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07615;old_locus_tag=CYJ03_007605
NZ_PJUP02000018.1	Protein Homology	CDS	30760	31176	.	+	0	ID=cds-WP_014613080.1;Parent=gene-CYJ03_RS07615;Dbxref=GenBank:WP_014613080.1;Name=WP_014613080.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729591.1;locus_tag=CYJ03_RS07615;product=GNAT family N-acetyltransferase;protein_id=WP_014613080.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	31254	31712	.	-	.	ID=gene-CYJ03_RS07620;Name=CYJ03_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07620;old_locus_tag=CYJ03_007610
NZ_PJUP02000018.1	Protein Homology	CDS	31254	31712	.	-	0	ID=cds-WP_014613078.1;Parent=gene-CYJ03_RS07620;Dbxref=GenBank:WP_014613078.1;Name=WP_014613078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165496.1;locus_tag=CYJ03_RS07620;product=DUF2871 domain-containing protein;protein_id=WP_014613078.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	31920	32123	.	-	.	ID=gene-CYJ03_RS07625;Name=CYJ03_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07625;old_locus_tag=CYJ03_007615
NZ_PJUP02000018.1	Protein Homology	CDS	31920	32123	.	-	0	ID=cds-WP_014613077.1;Parent=gene-CYJ03_RS07625;Dbxref=GenBank:WP_014613077.1;Name=WP_014613077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219804.1;locus_tag=CYJ03_RS07625;product=hypothetical protein;protein_id=WP_014613077.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	32426	34081	.	-	.	ID=gene-CYJ03_RS07630;Name=CYJ03_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07630;old_locus_tag=CYJ03_007620
NZ_PJUP02000018.1	Protein Homology	CDS	32426	34081	.	-	0	ID=cds-WP_096533529.1;Parent=gene-CYJ03_RS07630;Dbxref=GenBank:WP_096533529.1;Name=WP_096533529.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385453.1;locus_tag=CYJ03_RS07630;product=Na/Pi cotransporter family protein;protein_id=WP_096533529.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	34492	34956	.	+	.	ID=gene-CYJ03_RS07635;Name=CYJ03_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07635;old_locus_tag=CYJ03_007625
NZ_PJUP02000018.1	Protein Homology	CDS	34492	34956	.	+	0	ID=cds-WP_014613075.1;Parent=gene-CYJ03_RS07635;Dbxref=GenBank:WP_014613075.1;Name=WP_014613075.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=CYJ03_RS07635;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014613075.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	34953	35891	.	+	.	ID=gene-CYJ03_RS07640;Name=CYJ03_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07640;old_locus_tag=CYJ03_007630
NZ_PJUP02000018.1	Protein Homology	CDS	34953	35891	.	+	0	ID=cds-WP_015729594.1;Parent=gene-CYJ03_RS07640;Dbxref=GenBank:WP_015729594.1;Name=WP_015729594.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=CYJ03_RS07640;product=magnesium transporter CorA family protein;protein_id=WP_015729594.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	36582	38021	.	-	.	ID=gene-CYJ03_RS07645;Name=CYJ03_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07645;old_locus_tag=CYJ03_007635
NZ_PJUP02000018.1	Protein Homology	CDS	36582	38021	.	-	0	ID=cds-WP_104052277.1;Parent=gene-CYJ03_RS07645;Dbxref=GenBank:WP_104052277.1;Name=WP_104052277.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166076.1;locus_tag=CYJ03_RS07645;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_104052277.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	38596	40689	.	+	.	ID=gene-CYJ03_RS07650;Name=CYJ03_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07650;old_locus_tag=CYJ03_007640
NZ_PJUP02000018.1	Protein Homology	CDS	38596	40689	.	+	0	ID=cds-WP_015729596.1;Parent=gene-CYJ03_RS07650;Dbxref=GenBank:WP_015729596.1;Name=WP_015729596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613072.1;locus_tag=CYJ03_RS07650;product=helix-turn-helix domain-containing protein;protein_id=WP_015729596.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	40775	41968	.	-	.	ID=gene-CYJ03_RS07655;Name=CYJ03_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07655;old_locus_tag=CYJ03_007645
NZ_PJUP02000018.1	Protein Homology	CDS	40775	41968	.	-	0	ID=cds-WP_103863117.1;Parent=gene-CYJ03_RS07655;Dbxref=GenBank:WP_103863117.1;Name=WP_103863117.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=CYJ03_RS07655;product=CynX/NimT family MFS transporter;protein_id=WP_103863117.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	42252	42587	.	+	.	ID=gene-CYJ03_RS07660;Name=CYJ03_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07660;old_locus_tag=CYJ03_007650
NZ_PJUP02000018.1	Protein Homology	CDS	42252	42587	.	+	0	ID=cds-WP_014613070.1;Parent=gene-CYJ03_RS07660;Dbxref=GenBank:WP_014613070.1;Name=WP_014613070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613070.1;locus_tag=CYJ03_RS07660;product=DUF4889 domain-containing protein;protein_id=WP_014613070.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	42942	43847	.	-	.	ID=gene-CYJ03_RS07665;Name=CYJ03_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07665;old_locus_tag=CYJ03_007655
NZ_PJUP02000018.1	Protein Homology	CDS	42942	43847	.	-	0	ID=cds-WP_104052278.1;Parent=gene-CYJ03_RS07665;Dbxref=GenBank:WP_104052278.1;Name=WP_104052278.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613069.1;locus_tag=CYJ03_RS07665;product=DMT family transporter;protein_id=WP_104052278.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	44019	45092	.	-	.	ID=gene-CYJ03_RS07670;Name=CYJ03_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07670;old_locus_tag=CYJ03_007660
NZ_PJUP02000018.1	Protein Homology	CDS	44019	45092	.	-	0	ID=cds-WP_101485101.1;Parent=gene-CYJ03_RS07670;Dbxref=GenBank:WP_101485101.1;Name=WP_101485101.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=CYJ03_RS07670;product=M42 family metallopeptidase;protein_id=WP_101485101.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	45273	46220	.	+	.	ID=gene-CYJ03_RS07675;Name=CYJ03_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07675;old_locus_tag=CYJ03_007665
NZ_PJUP02000018.1	Protein Homology	CDS	45273	46220	.	+	0	ID=cds-WP_014613067.1;Parent=gene-CYJ03_RS07675;Dbxref=GenBank:WP_014613067.1;Name=WP_014613067.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613067.1;locus_tag=CYJ03_RS07675;product=lactate/malate family dehydrogenase;protein_id=WP_014613067.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	46388	46744	.	-	.	ID=gene-CYJ03_RS07680;Name=CYJ03_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07680;old_locus_tag=CYJ03_007670
NZ_PJUP02000018.1	Protein Homology	CDS	46388	46744	.	-	0	ID=cds-WP_014613066.1;Parent=gene-CYJ03_RS07680;Dbxref=GenBank:WP_014613066.1;Name=WP_014613066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=CYJ03_RS07680;product=DUF3139 domain-containing protein;protein_id=WP_014613066.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	gene	46928	48526	.	+	.	ID=gene-CYJ03_RS07685;Name=CYJ03_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07685;old_locus_tag=CYJ03_007675
NZ_PJUP02000018.1	Protein Homology	CDS	46928	48526	.	+	0	ID=cds-WP_063284804.1;Parent=gene-CYJ03_RS07685;Dbxref=GenBank:WP_063284804.1;Name=WP_063284804.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729598.1;locus_tag=CYJ03_RS07685;product=M20 family metallopeptidase;protein_id=WP_063284804.1;transl_table=11
NZ_PJUP02000018.1	RefSeq	pseudogene	48634	48882	.	-	.	ID=gene-CYJ03_RS07690;Name=CYJ03_RS07690;end_range=48882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07690;old_locus_tag=CYJ03_007680;partial=true;pseudo=true
NZ_PJUP02000018.1	Protein Homology	CDS	48634	48882	.	-	0	ID=cds-CYJ03_RS07690;Parent=gene-CYJ03_RS07690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=48882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS07690;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000016.1 1 56096
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000016.1	RefSeq	region	1	56096	.	+	.	ID=NZ_PJUP02000016.1:1..56096;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000016.1	RefSeq	gene	520	822	.	+	.	ID=gene-CYJ03_RS06945;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=CYJ03_RS06945;old_locus_tag=CYJ03_006935
NZ_PJUP02000016.1	Protein Homology	CDS	520	822	.	+	0	ID=cds-WP_014613458.1;Parent=gene-CYJ03_RS06945;Dbxref=GenBank:WP_014613458.1;Name=WP_014613458.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=CYJ03_RS06945;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014613458.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	825	2285	.	+	.	ID=gene-CYJ03_RS06950;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CYJ03_RS06950;old_locus_tag=CYJ03_006940
NZ_PJUP02000016.1	Protein Homology	CDS	825	2285	.	+	0	ID=cds-WP_014613459.1;Parent=gene-CYJ03_RS06950;Dbxref=GenBank:WP_014613459.1;Name=WP_014613459.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CYJ03_RS06950;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_014613459.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	2299	3726	.	+	.	ID=gene-CYJ03_RS06955;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CYJ03_RS06955;old_locus_tag=CYJ03_006945
NZ_PJUP02000016.1	Protein Homology	CDS	2299	3726	.	+	0	ID=cds-WP_014613460.1;Parent=gene-CYJ03_RS06955;Dbxref=GenBank:WP_014613460.1;Name=WP_014613460.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=CYJ03_RS06955;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014613460.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	4404	5336	.	+	.	ID=gene-CYJ03_RS06960;Name=CYJ03_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06960;old_locus_tag=CYJ03_006950
NZ_PJUP02000016.1	Protein Homology	CDS	4404	5336	.	+	0	ID=cds-WP_014613461.1;Parent=gene-CYJ03_RS06960;Dbxref=GenBank:WP_014613461.1;Name=WP_014613461.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=CYJ03_RS06960;product=diacylglycerol kinase;protein_id=WP_014613461.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	5508	6872	.	+	.	ID=gene-CYJ03_RS06965;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CYJ03_RS06965;old_locus_tag=CYJ03_006955
NZ_PJUP02000016.1	Protein Homology	CDS	5508	6872	.	+	0	ID=cds-WP_015729392.1;Parent=gene-CYJ03_RS06965;Dbxref=GenBank:WP_015729392.1;Name=WP_015729392.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613462.1;locus_tag=CYJ03_RS06965;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_015729392.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	7187	7936	.	+	.	ID=gene-CYJ03_RS06970;Name=CYJ03_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06970;old_locus_tag=CYJ03_006960
NZ_PJUP02000016.1	GeneMarkS-2+	CDS	7187	7936	.	+	0	ID=cds-WP_037542633.1;Parent=gene-CYJ03_RS06970;Dbxref=GenBank:WP_037542633.1;Name=WP_037542633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS06970;product=hypothetical protein;protein_id=WP_037542633.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	7989	9032	.	+	.	ID=gene-CYJ03_RS06975;Name=CYJ03_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06975;old_locus_tag=CYJ03_006965
NZ_PJUP02000016.1	Protein Homology	CDS	7989	9032	.	+	0	ID=cds-WP_014613464.1;Parent=gene-CYJ03_RS06975;Dbxref=GenBank:WP_014613464.1;Name=WP_014613464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014661.7;locus_tag=CYJ03_RS06975;product=YcaO-like family protein;protein_id=WP_014613464.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	9043	10233	.	+	.	ID=gene-CYJ03_RS06980;Name=CYJ03_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06980;old_locus_tag=CYJ03_006970
NZ_PJUP02000016.1	Protein Homology	CDS	9043	10233	.	+	0	ID=cds-WP_101457584.1;Parent=gene-CYJ03_RS06980;Dbxref=GenBank:WP_101457584.1;Name=WP_101457584.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ03_RS06980;product=MFS transporter;protein_id=WP_101457584.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	10247	11614	.	+	.	ID=gene-CYJ03_RS06985;Name=CYJ03_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06985;old_locus_tag=CYJ03_006975
NZ_PJUP02000016.1	Protein Homology	CDS	10247	11614	.	+	0	ID=cds-WP_181137781.1;Parent=gene-CYJ03_RS06985;Dbxref=GenBank:WP_181137781.1;Name=WP_181137781.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ03_RS06985;product=ATP-binding cassette domain-containing protein;protein_id=WP_181137781.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	pseudogene	12147	12377	.	+	.	ID=gene-CYJ03_RS06990;Name=CYJ03_RS06990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS06990;old_locus_tag=CYJ03_006980;partial=true;pseudo=true;start_range=.,12147
NZ_PJUP02000016.1	Protein Homology	CDS	12147	12377	.	+	0	ID=cds-CYJ03_RS06990;Parent=gene-CYJ03_RS06990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613462.1;locus_tag=CYJ03_RS06990;partial=true;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;start_range=.,12147;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	12850	13734	.	+	.	ID=gene-CYJ03_RS06995;Name=CYJ03_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS06995;old_locus_tag=CYJ03_006985
NZ_PJUP02000016.1	Protein Homology	CDS	12850	13734	.	+	0	ID=cds-WP_104052257.1;Parent=gene-CYJ03_RS06995;Dbxref=GenBank:WP_104052257.1;Name=WP_104052257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01716.1;locus_tag=CYJ03_RS06995;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=WP_104052257.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	13807	13932	.	+	.	ID=gene-CYJ03_RS12830;Name=CYJ03_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12830
NZ_PJUP02000016.1	Protein Homology	CDS	13807	13932	.	+	0	ID=cds-WP_014613468.1;Parent=gene-CYJ03_RS12830;Dbxref=GenBank:WP_014613468.1;Name=WP_014613468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041055.1;locus_tag=CYJ03_RS12830;product=ryptide family R-Y-crosslinked RiPP peptide;protein_id=WP_014613468.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	13950	14117	.	+	.	ID=gene-CYJ03_RS12425;Name=CYJ03_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12425
NZ_PJUP02000016.1	GeneMarkS-2+	CDS	13950	14117	.	+	0	ID=cds-WP_198587996.1;Parent=gene-CYJ03_RS12425;Dbxref=GenBank:WP_198587996.1;Name=WP_198587996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12425;product=hypothetical protein;protein_id=WP_198587996.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	14125	14904	.	+	.	ID=gene-CYJ03_RS12585;Name=CYJ03_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12585
NZ_PJUP02000016.1	Protein Homology	CDS	14125	14904	.	+	0	ID=cds-WP_258058104.1;Parent=gene-CYJ03_RS12585;Dbxref=GenBank:WP_258058104.1;Name=WP_258058104.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: protein motif:HMM:NF015983.7;locus_tag=CYJ03_RS12585;product=radical SAM protein;protein_id=WP_258058104.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	15023	15343	.	+	.	ID=gene-CYJ03_RS12590;Name=CYJ03_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12590
NZ_PJUP02000016.1	Protein Homology	CDS	15023	15343	.	+	0	ID=cds-WP_258058105.1;Parent=gene-CYJ03_RS12590;Dbxref=GenBank:WP_258058105.1;Name=WP_258058105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=CYJ03_RS12590;product=SPASM domain-containing protein;protein_id=WP_258058105.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	15336	16514	.	+	.	ID=gene-CYJ03_RS07005;Name=CYJ03_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07005;old_locus_tag=CYJ03_006995
NZ_PJUP02000016.1	Protein Homology	CDS	15336	16514	.	+	0	ID=cds-WP_101457319.1;Parent=gene-CYJ03_RS07005;Dbxref=GenBank:WP_101457319.1;Name=WP_101457319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613470.1;locus_tag=CYJ03_RS07005;product=ryptide export MFS transporter;protein_id=WP_101457319.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	16904	17446	.	+	.	ID=gene-CYJ03_RS07010;Name=CYJ03_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07010;old_locus_tag=CYJ03_007000
NZ_PJUP02000016.1	Protein Homology	CDS	16904	17446	.	+	0	ID=cds-WP_014613471.1;Parent=gene-CYJ03_RS07010;Dbxref=GenBank:WP_014613471.1;Name=WP_014613471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613471.1;locus_tag=CYJ03_RS07010;product=metalloprotease family protein;protein_id=WP_014613471.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	17551	18621	.	+	.	ID=gene-CYJ03_RS07015;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07015;old_locus_tag=CYJ03_007005
NZ_PJUP02000016.1	Protein Homology	CDS	17551	18621	.	+	0	ID=cds-WP_014613472.1;Parent=gene-CYJ03_RS07015;Dbxref=GenBank:WP_014613472.1;Name=WP_014613472.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=CYJ03_RS07015;product=DNA polymerase IV;protein_id=WP_014613472.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	18616	19176	.	-	.	ID=gene-CYJ03_RS07020;Name=CYJ03_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07020;old_locus_tag=CYJ03_007010
NZ_PJUP02000016.1	Protein Homology	CDS	18616	19176	.	-	0	ID=cds-WP_014613473.1;Parent=gene-CYJ03_RS07020;Dbxref=GenBank:WP_014613473.1;Name=WP_014613473.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=CYJ03_RS07020;product=3'-5' exonuclease;protein_id=WP_014613473.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	19465	19968	.	-	.	ID=gene-CYJ03_RS07025;Name=CYJ03_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07025;old_locus_tag=CYJ03_007015
NZ_PJUP02000016.1	Protein Homology	CDS	19465	19968	.	-	0	ID=cds-WP_014613474.1;Parent=gene-CYJ03_RS07025;Dbxref=GenBank:WP_014613474.1;Name=WP_014613474.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613474.1;locus_tag=CYJ03_RS07025;product=ferritin;protein_id=WP_014613474.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	20165	21475	.	+	.	ID=gene-CYJ03_RS07030;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=CYJ03_RS07030;old_locus_tag=CYJ03_007020
NZ_PJUP02000016.1	Protein Homology	CDS	20165	21475	.	+	0	ID=cds-WP_014613475.1;Parent=gene-CYJ03_RS07030;Dbxref=GenBank:WP_014613475.1;Name=WP_014613475.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166457.1;locus_tag=CYJ03_RS07030;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_014613475.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	21477	22199	.	+	.	ID=gene-CYJ03_RS07035;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CYJ03_RS07035;old_locus_tag=CYJ03_007025
NZ_PJUP02000016.1	Protein Homology	CDS	21477	22199	.	+	0	ID=cds-WP_014613476.1;Parent=gene-CYJ03_RS07035;Dbxref=GenBank:WP_014613476.1;Name=WP_014613476.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613476.1;locus_tag=CYJ03_RS07035;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_014613476.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	23167	24165	.	-	.	ID=gene-CYJ03_RS07040;Name=CYJ03_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07040;old_locus_tag=CYJ03_007030
NZ_PJUP02000016.1	Protein Homology	CDS	23167	24165	.	-	0	ID=cds-WP_014613477.1;Parent=gene-CYJ03_RS07040;Dbxref=GenBank:WP_014613477.1;Name=WP_014613477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169359.1;locus_tag=CYJ03_RS07040;product=FUSC family protein;protein_id=WP_014613477.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	24262	25023	.	+	.	ID=gene-CYJ03_RS07045;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CYJ03_RS07045;old_locus_tag=CYJ03_007035
NZ_PJUP02000016.1	Protein Homology	CDS	24262	25023	.	+	0	ID=cds-WP_014613478.1;Parent=gene-CYJ03_RS07045;Dbxref=GenBank:WP_014613478.1;Name=WP_014613478.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169360.1;locus_tag=CYJ03_RS07045;product=type I methionyl aminopeptidase;protein_id=WP_014613478.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	25121	25510	.	+	.	ID=gene-CYJ03_RS07050;Name=CYJ03_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07050;old_locus_tag=CYJ03_007040
NZ_PJUP02000016.1	Protein Homology	CDS	25121	25510	.	+	0	ID=cds-WP_014613479.1;Parent=gene-CYJ03_RS07050;Dbxref=GenBank:WP_014613479.1;Name=WP_014613479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613479.1;locus_tag=CYJ03_RS07050;product=hypothetical protein;protein_id=WP_014613479.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	25523	26224	.	+	.	ID=gene-CYJ03_RS07055;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=CYJ03_RS07055;old_locus_tag=CYJ03_007045
NZ_PJUP02000016.1	Protein Homology	CDS	25523	26224	.	+	0	ID=cds-WP_014613480.1;Parent=gene-CYJ03_RS07055;Dbxref=GenBank:WP_014613480.1;Name=WP_014613480.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=CYJ03_RS07055;product=cell wall-active antibiotics response protein VraT;protein_id=WP_014613480.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	26221	27264	.	+	.	ID=gene-CYJ03_RS07060;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07060;old_locus_tag=CYJ03_007050
NZ_PJUP02000016.1	Protein Homology	CDS	26221	27264	.	+	0	ID=cds-WP_014613481.1;Parent=gene-CYJ03_RS07060;Dbxref=GenBank:WP_014613481.1;Name=WP_014613481.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=CYJ03_RS07060;product=sensor histidine kinase VraS;protein_id=WP_014613481.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	27254	27883	.	+	.	ID=gene-CYJ03_RS07065;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=CYJ03_RS07065;old_locus_tag=CYJ03_007055
NZ_PJUP02000016.1	Protein Homology	CDS	27254	27883	.	+	0	ID=cds-WP_014613482.1;Parent=gene-CYJ03_RS07065;Dbxref=GenBank:WP_014613482.1;Name=WP_014613482.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=CYJ03_RS07065;product=response regulator transcription factor VraR;protein_id=WP_014613482.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	28450	29031	.	-	.	ID=gene-CYJ03_RS07070;Name=CYJ03_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07070;old_locus_tag=CYJ03_007060
NZ_PJUP02000016.1	Protein Homology	CDS	28450	29031	.	-	0	ID=cds-WP_070407816.1;Parent=gene-CYJ03_RS07070;Dbxref=GenBank:WP_070407816.1;Name=WP_070407816.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729388.1;locus_tag=CYJ03_RS07070;product=beta-class carbonic anhydrase;protein_id=WP_070407816.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	29064	30401	.	-	.	ID=gene-CYJ03_RS07075;Name=CYJ03_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07075;old_locus_tag=CYJ03_007065
NZ_PJUP02000016.1	Protein Homology	CDS	29064	30401	.	-	0	ID=cds-WP_015729387.1;Parent=gene-CYJ03_RS07075;Dbxref=GenBank:WP_015729387.1;Name=WP_015729387.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729387.1;locus_tag=CYJ03_RS07075;product=YihY/virulence factor BrkB family protein;protein_id=WP_015729387.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	30617	30904	.	-	.	ID=gene-CYJ03_RS07080;Name=CYJ03_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07080;old_locus_tag=CYJ03_007070
NZ_PJUP02000016.1	Protein Homology	CDS	30617	30904	.	-	0	ID=cds-WP_014613485.1;Parent=gene-CYJ03_RS07080;Dbxref=GenBank:WP_014613485.1;Name=WP_014613485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169367.1;locus_tag=CYJ03_RS07080;product=YtxH domain-containing protein;protein_id=WP_014613485.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	30912	31370	.	-	.	ID=gene-CYJ03_RS07085;Name=CYJ03_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07085;old_locus_tag=CYJ03_007075
NZ_PJUP02000016.1	Protein Homology	CDS	30912	31370	.	-	0	ID=cds-WP_101457320.1;Parent=gene-CYJ03_RS07085;Dbxref=GenBank:WP_101457320.1;Name=WP_101457320.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=CYJ03_RS07085;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_101457320.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	31504	31707	.	+	.	ID=gene-CYJ03_RS07090;Name=CYJ03_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07090;old_locus_tag=CYJ03_007080
NZ_PJUP02000016.1	Protein Homology	CDS	31504	31707	.	+	0	ID=cds-WP_014613487.1;Parent=gene-CYJ03_RS07090;Dbxref=GenBank:WP_014613487.1;Name=WP_014613487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482850.1;locus_tag=CYJ03_RS07090;product=DUF1128 family protein;protein_id=WP_014613487.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	31729	32961	.	+	.	ID=gene-CYJ03_RS07095;Name=CYJ03_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07095;old_locus_tag=CYJ03_007085
NZ_PJUP02000016.1	Protein Homology	CDS	31729	32961	.	+	0	ID=cds-WP_096536100.1;Parent=gene-CYJ03_RS07095;Dbxref=GenBank:WP_096536100.1;Name=WP_096536100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729386.1;locus_tag=CYJ03_RS07095;product=aminopeptidase;protein_id=WP_096536100.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	32980	33501	.	+	.	ID=gene-CYJ03_RS07100;Name=CYJ03_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07100;old_locus_tag=CYJ03_007090
NZ_PJUP02000016.1	Protein Homology	CDS	32980	33501	.	+	0	ID=cds-WP_014613489.1;Parent=gene-CYJ03_RS07100;Dbxref=GenBank:WP_014613489.1;Name=WP_014613489.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166469.1;locus_tag=CYJ03_RS07100;product=acyl-CoA thioesterase;protein_id=WP_014613489.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	33566	34705	.	-	.	ID=gene-CYJ03_RS07105;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07105;old_locus_tag=CYJ03_007095
NZ_PJUP02000016.1	Protein Homology	CDS	33566	34705	.	-	0	ID=cds-WP_101457321.1;Parent=gene-CYJ03_RS07105;Dbxref=GenBank:WP_101457321.1;Name=WP_101457321.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219887.1;locus_tag=CYJ03_RS07105;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_101457321.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	34821	34982	.	+	.	ID=gene-CYJ03_RS12300;Name=CYJ03_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12300
NZ_PJUP02000016.1	Protein Homology	CDS	34821	34982	.	+	0	ID=cds-WP_015729384.1;Parent=gene-CYJ03_RS12300;Dbxref=GenBank:WP_015729384.1;Name=WP_015729384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=CYJ03_RS12300;product=SE1561 family protein;protein_id=WP_015729384.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	35058	35573	.	+	.	ID=gene-CYJ03_RS07110;Name=CYJ03_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07110;old_locus_tag=CYJ03_007100
NZ_PJUP02000016.1	Protein Homology	CDS	35058	35573	.	+	0	ID=cds-WP_100006625.1;Parent=gene-CYJ03_RS07110;Dbxref=GenBank:WP_100006625.1;Name=WP_100006625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500510.1;locus_tag=CYJ03_RS07110;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_100006625.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	36148	37893	.	-	.	ID=gene-CYJ03_RS07115;Name=CYJ03_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07115;old_locus_tag=CYJ03_007105
NZ_PJUP02000016.1	Protein Homology	CDS	36148	37893	.	-	0	ID=cds-WP_015729383.1;Parent=gene-CYJ03_RS07115;Dbxref=GenBank:WP_015729383.1;Name=WP_015729383.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=CYJ03_RS07115;product=pyruvate oxidase;protein_id=WP_015729383.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	38094	38891	.	+	.	ID=gene-CYJ03_RS07120;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07120;old_locus_tag=CYJ03_007110
NZ_PJUP02000016.1	Protein Homology	CDS	38094	38891	.	+	0	ID=cds-WP_104052258.1;Parent=gene-CYJ03_RS07120;Dbxref=GenBank:WP_104052258.1;Name=WP_104052258.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166474.1;locus_tag=CYJ03_RS07120;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_104052258.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	39076	39879	.	+	.	ID=gene-CYJ03_RS07125;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CYJ03_RS07125;old_locus_tag=CYJ03_007115
NZ_PJUP02000016.1	Protein Homology	CDS	39076	39879	.	+	0	ID=cds-WP_015729382.1;Parent=gene-CYJ03_RS07125;Dbxref=GenBank:WP_015729382.1;Name=WP_015729382.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=CYJ03_RS07125;product=recombination regulator RecX;protein_id=WP_015729382.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	39872	40186	.	+	.	ID=gene-CYJ03_RS07130;Name=CYJ03_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07130;old_locus_tag=CYJ03_007120
NZ_PJUP02000016.1	Protein Homology	CDS	39872	40186	.	+	0	ID=cds-WP_014613497.1;Parent=gene-CYJ03_RS07130;Dbxref=GenBank:WP_014613497.1;Name=WP_014613497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509976.1;locus_tag=CYJ03_RS07130;product=YfhH family protein;protein_id=WP_014613497.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	40202	41731	.	+	.	ID=gene-CYJ03_RS07135;Name=CYJ03_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07135;old_locus_tag=CYJ03_007125
NZ_PJUP02000016.1	Protein Homology	CDS	40202	41731	.	+	0	ID=cds-WP_104052259.1;Parent=gene-CYJ03_RS07135;Dbxref=GenBank:WP_104052259.1;Name=WP_104052259.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501580.1;locus_tag=CYJ03_RS07135;product=ATP-binding cassette domain-containing protein;protein_id=WP_104052259.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	41735	42538	.	+	.	ID=gene-CYJ03_RS07140;Name=CYJ03_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07140;old_locus_tag=CYJ03_007130
NZ_PJUP02000016.1	Protein Homology	CDS	41735	42538	.	+	0	ID=cds-WP_201800441.1;Parent=gene-CYJ03_RS07140;Dbxref=GenBank:WP_201800441.1;Name=WP_201800441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=CYJ03_RS07140;product=teichoic acid translocation permease;protein_id=WP_201800441.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	43009	43986	.	-	.	ID=gene-CYJ03_RS07145;Name=CYJ03_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07145;old_locus_tag=CYJ03_007135
NZ_PJUP02000016.1	Protein Homology	CDS	43009	43986	.	-	0	ID=cds-WP_015729379.1;Parent=gene-CYJ03_RS07145;Dbxref=GenBank:WP_015729379.1;Name=WP_015729379.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=CYJ03_RS07145;product=metal-dependent hydrolase;protein_id=WP_015729379.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	44077	45123	.	+	.	ID=gene-CYJ03_RS07150;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CYJ03_RS07150;old_locus_tag=CYJ03_007140
NZ_PJUP02000016.1	Protein Homology	CDS	44077	45123	.	+	0	ID=cds-WP_014613501.1;Parent=gene-CYJ03_RS07150;Dbxref=GenBank:WP_014613501.1;Name=WP_014613501.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166479.1;locus_tag=CYJ03_RS07150;product=A/G-specific adenine glycosylase;protein_id=WP_014613501.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	45189	45731	.	+	.	ID=gene-CYJ03_RS07155;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=CYJ03_RS07155;old_locus_tag=CYJ03_007145
NZ_PJUP02000016.1	Protein Homology	CDS	45189	45731	.	+	0	ID=cds-WP_014613502.1;Parent=gene-CYJ03_RS07155;Dbxref=GenBank:WP_014613502.1;Name=WP_014613502.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CYJ03_RS07155;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_014613502.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	46412	48148	.	+	.	ID=gene-CYJ03_RS07160;Name=CYJ03_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07160;old_locus_tag=CYJ03_007150
NZ_PJUP02000016.1	Protein Homology	CDS	46412	48148	.	+	0	ID=cds-WP_014613503.1;Parent=gene-CYJ03_RS07160;Dbxref=GenBank:WP_014613503.1;Name=WP_014613503.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=CYJ03_RS07160;product=ABC transporter ATP-binding protein;protein_id=WP_014613503.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	48674	50251	.	+	.	ID=gene-CYJ03_RS07165;Name=CYJ03_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07165;old_locus_tag=CYJ03_007155
NZ_PJUP02000016.1	Protein Homology	CDS	48674	50251	.	+	0	ID=cds-WP_104052260.1;Parent=gene-CYJ03_RS07165;Dbxref=GenBank:WP_104052260.1;Name=WP_104052260.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613505.1;locus_tag=CYJ03_RS07165;product=FMN-binding glutamate synthase family protein;protein_id=WP_104052260.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	50399	51493	.	-	.	ID=gene-CYJ03_RS07170;Name=CYJ03_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07170;old_locus_tag=CYJ03_007160
NZ_PJUP02000016.1	Protein Homology	CDS	50399	51493	.	-	0	ID=cds-WP_014613506.1;Parent=gene-CYJ03_RS07170;Dbxref=GenBank:WP_014613506.1;Name=WP_014613506.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=CYJ03_RS07170;product=FUSC family protein;protein_id=WP_014613506.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	51587	52873	.	-	.	ID=gene-CYJ03_RS07175;Name=CYJ03_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07175;old_locus_tag=CYJ03_007165
NZ_PJUP02000016.1	Protein Homology	CDS	51587	52873	.	-	0	ID=cds-WP_104052261.1;Parent=gene-CYJ03_RS07175;Dbxref=GenBank:WP_104052261.1;Name=WP_104052261.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169387.1;locus_tag=CYJ03_RS07175;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_104052261.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	52956	53414	.	+	.	ID=gene-CYJ03_RS07180;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CYJ03_RS07180;old_locus_tag=CYJ03_007170
NZ_PJUP02000016.1	Protein Homology	CDS	52956	53414	.	+	0	ID=cds-WP_014613508.1;Parent=gene-CYJ03_RS07180;Dbxref=GenBank:WP_014613508.1;Name=WP_014613508.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=CYJ03_RS07180;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_014613508.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	53421	54371	.	+	.	ID=gene-CYJ03_RS07185;Name=CYJ03_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07185;old_locus_tag=CYJ03_007175
NZ_PJUP02000016.1	Protein Homology	CDS	53421	54371	.	+	0	ID=cds-WP_015729374.1;Parent=gene-CYJ03_RS07185;Dbxref=GenBank:WP_015729374.1;Name=WP_015729374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=CYJ03_RS07185;product=phosphoglycerate dehydrogenase;protein_id=WP_015729374.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	54452	54910	.	+	.	ID=gene-CYJ03_RS07190;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=CYJ03_RS07190;old_locus_tag=CYJ03_007180
NZ_PJUP02000016.1	Protein Homology	CDS	54452	54910	.	+	0	ID=cds-WP_014613510.1;Parent=gene-CYJ03_RS07190;Dbxref=GenBank:WP_014613510.1;Name=WP_014613510.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613510.1;locus_tag=CYJ03_RS07190;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_014613510.1;transl_table=11
NZ_PJUP02000016.1	RefSeq	gene	55642	56096	.	+	.	ID=gene-CYJ03_RS12430;Name=CYJ03_RS12430;end_range=56096,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12430;partial=true
NZ_PJUP02000016.1	cmsearch	rRNA	55642	56096	.	+	.	ID=rna-CYJ03_RS12430;Parent=gene-CYJ03_RS12430;Dbxref=RFAM:RF00177;end_range=56096,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12430;partial=true;product=16S ribosomal RNA
NZ_PJUP02000016.1	cmsearch	exon	55642	56096	.	+	.	ID=exon-CYJ03_RS12430-1;Parent=rna-CYJ03_RS12430;Dbxref=RFAM:RF00177;end_range=56096,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12430;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUP02000023.1 1 40760
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000023.1	RefSeq	region	1	40760	.	+	.	ID=NZ_PJUP02000023.1:1..40760;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000023.1	RefSeq	gene	375	785	.	+	.	ID=gene-CYJ03_RS08650;Name=CYJ03_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08650;old_locus_tag=CYJ03_008640
NZ_PJUP02000023.1	Protein Homology	CDS	375	785	.	+	0	ID=cds-WP_101457543.1;Parent=gene-CYJ03_RS08650;Dbxref=GenBank:WP_101457543.1;Name=WP_101457543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728586.1;locus_tag=CYJ03_RS08650;product=hypothetical protein;protein_id=WP_101457543.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	1117	2457	.	+	.	ID=gene-CYJ03_RS08655;Name=CYJ03_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08655;old_locus_tag=CYJ03_008645
NZ_PJUP02000023.1	Protein Homology	CDS	1117	2457	.	+	0	ID=cds-WP_101457544.1;Parent=gene-CYJ03_RS08655;Dbxref=GenBank:WP_101457544.1;Name=WP_101457544.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=CYJ03_RS08655;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_101457544.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	2460	3077	.	+	.	ID=gene-CYJ03_RS08660;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CYJ03_RS08660;old_locus_tag=CYJ03_008650
NZ_PJUP02000023.1	Protein Homology	CDS	2460	3077	.	+	0	ID=cds-WP_014614823.1;Parent=gene-CYJ03_RS08660;Dbxref=GenBank:WP_014614823.1;Name=WP_014614823.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614823.1;locus_tag=CYJ03_RS08660;product=dTMP kinase;protein_id=WP_014614823.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	3147	3476	.	+	.	ID=gene-CYJ03_RS08665;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08665;old_locus_tag=CYJ03_008655
NZ_PJUP02000023.1	Protein Homology	CDS	3147	3476	.	+	0	ID=cds-WP_014614822.1;Parent=gene-CYJ03_RS08665;Dbxref=GenBank:WP_014614822.1;Name=WP_014614822.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CYJ03_RS08665;product=cyclic di-AMP receptor DarA;protein_id=WP_014614822.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	3720	4652	.	+	.	ID=gene-CYJ03_RS08670;Name=CYJ03_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08670;old_locus_tag=CYJ03_008660
NZ_PJUP02000023.1	Protein Homology	CDS	3720	4652	.	+	0	ID=cds-WP_037543979.1;Parent=gene-CYJ03_RS08670;Dbxref=GenBank:WP_037543979.1;Name=WP_037543979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=CYJ03_RS08670;product=DNA polymerase III delta subunit-related protein;protein_id=WP_037543979.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	4658	5461	.	+	.	ID=gene-CYJ03_RS08675;Name=CYJ03_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08675;old_locus_tag=CYJ03_008665
NZ_PJUP02000023.1	Protein Homology	CDS	4658	5461	.	+	0	ID=cds-WP_014614820.1;Parent=gene-CYJ03_RS08675;Dbxref=GenBank:WP_014614820.1;Name=WP_014614820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=CYJ03_RS08675;product=PSP1 domain-containing protein;protein_id=WP_014614820.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	5474	5839	.	+	.	ID=gene-CYJ03_RS08680;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08680;old_locus_tag=CYJ03_008670
NZ_PJUP02000023.1	Protein Homology	CDS	5474	5839	.	+	0	ID=cds-WP_014614819.1;Parent=gene-CYJ03_RS08680;Dbxref=GenBank:WP_014614819.1;Name=WP_014614819.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169136.1;locus_tag=CYJ03_RS08680;product=DNA replication initiation control protein YabA;protein_id=WP_014614819.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	5850	6575	.	+	.	ID=gene-CYJ03_RS08685;Name=CYJ03_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08685;old_locus_tag=CYJ03_008675
NZ_PJUP02000023.1	Protein Homology	CDS	5850	6575	.	+	0	ID=cds-WP_014614818.1;Parent=gene-CYJ03_RS08685;Dbxref=GenBank:WP_014614818.1;Name=WP_014614818.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=CYJ03_RS08685;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014614818.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	6568	6816	.	+	.	ID=gene-CYJ03_RS08690;Name=CYJ03_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08690;old_locus_tag=CYJ03_008680
NZ_PJUP02000023.1	Protein Homology	CDS	6568	6816	.	+	0	ID=cds-WP_104052301.1;Parent=gene-CYJ03_RS08690;Dbxref=GenBank:WP_104052301.1;Name=WP_104052301.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276773.1;locus_tag=CYJ03_RS08690;product=GIY-YIG nuclease family protein;protein_id=WP_104052301.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	6818	7651	.	+	.	ID=gene-CYJ03_RS08695;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CYJ03_RS08695;old_locus_tag=CYJ03_008685
NZ_PJUP02000023.1	Protein Homology	CDS	6818	7651	.	+	0	ID=cds-WP_104052302.1;Parent=gene-CYJ03_RS08695;Dbxref=GenBank:WP_104052302.1;Name=WP_104052302.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166563.1;locus_tag=CYJ03_RS08695;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_104052302.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	7742	9715	.	+	.	ID=gene-CYJ03_RS08700;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CYJ03_RS08700;old_locus_tag=CYJ03_008690
NZ_PJUP02000023.1	Protein Homology	CDS	7742	9715	.	+	0	ID=cds-WP_101457545.1;Parent=gene-CYJ03_RS08700;Dbxref=GenBank:WP_101457545.1;Name=WP_101457545.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=CYJ03_RS08700;product=methionine--tRNA ligase;protein_id=WP_101457545.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	10159	10926	.	+	.	ID=gene-CYJ03_RS08705;Name=CYJ03_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08705;old_locus_tag=CYJ03_008695
NZ_PJUP02000023.1	Protein Homology	CDS	10159	10926	.	+	0	ID=cds-WP_015728591.1;Parent=gene-CYJ03_RS08705;Dbxref=GenBank:WP_015728591.1;Name=WP_015728591.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614814.1;locus_tag=CYJ03_RS08705;product=TatD family hydrolase;protein_id=WP_015728591.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	10966	11505	.	+	.	ID=gene-CYJ03_RS08710;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CYJ03_RS08710;old_locus_tag=CYJ03_008700
NZ_PJUP02000023.1	Protein Homology	CDS	10966	11505	.	+	0	ID=cds-WP_014614813.1;Parent=gene-CYJ03_RS08710;Dbxref=GenBank:WP_014614813.1;Name=WP_014614813.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=CYJ03_RS08710;product=ribonuclease M5;protein_id=WP_014614813.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	11510	12400	.	+	.	ID=gene-CYJ03_RS08715;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08715;old_locus_tag=CYJ03_008705
NZ_PJUP02000023.1	Protein Homology	CDS	11510	12400	.	+	0	ID=cds-WP_014614812.1;Parent=gene-CYJ03_RS08715;Dbxref=GenBank:WP_014614812.1;Name=WP_014614812.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=CYJ03_RS08715;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_014614812.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	12500	12766	.	+	.	ID=gene-CYJ03_RS08720;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=CYJ03_RS08720;old_locus_tag=CYJ03_008710
NZ_PJUP02000023.1	Protein Homology	CDS	12500	12766	.	+	0	ID=cds-WP_014614811.1;Parent=gene-CYJ03_RS08720;Dbxref=GenBank:WP_014614811.1;Name=WP_014614811.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=CYJ03_RS08720;product=biofilm formation stimulator Veg;protein_id=WP_014614811.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	13158	14006	.	+	.	ID=gene-CYJ03_RS08725;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CYJ03_RS08725;old_locus_tag=CYJ03_008715
NZ_PJUP02000023.1	Protein Homology	CDS	13158	14006	.	+	0	ID=cds-WP_014614810.1;Parent=gene-CYJ03_RS08725;Dbxref=GenBank:WP_014614810.1;Name=WP_014614810.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=CYJ03_RS08725;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014614810.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	14028	14849	.	+	.	ID=gene-CYJ03_RS08730;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CYJ03_RS08730;old_locus_tag=CYJ03_008720
NZ_PJUP02000023.1	Protein Homology	CDS	14028	14849	.	+	0	ID=cds-WP_014614809.1;Parent=gene-CYJ03_RS08730;Dbxref=GenBank:WP_014614809.1;Name=WP_014614809.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614809.1;locus_tag=CYJ03_RS08730;product=pur operon repressor;protein_id=WP_014614809.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	14874	15254	.	+	.	ID=gene-CYJ03_RS08735;Name=CYJ03_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08735;old_locus_tag=CYJ03_008725
NZ_PJUP02000023.1	Protein Homology	CDS	14874	15254	.	+	0	ID=cds-WP_014614808.1;Parent=gene-CYJ03_RS08735;Dbxref=GenBank:WP_014614808.1;Name=WP_014614808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667755.1;locus_tag=CYJ03_RS08735;product=RidA family protein;protein_id=WP_014614808.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	15333	15647	.	+	.	ID=gene-CYJ03_RS08740;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=CYJ03_RS08740;old_locus_tag=CYJ03_008730
NZ_PJUP02000023.1	Protein Homology	CDS	15333	15647	.	+	0	ID=cds-WP_014614807.1;Parent=gene-CYJ03_RS08740;Dbxref=GenBank:WP_014614807.1;Name=WP_014614807.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614807.1;locus_tag=CYJ03_RS08740;product=septation regulator SpoVG;protein_id=WP_014614807.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	15929	17293	.	+	.	ID=gene-CYJ03_RS08745;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CYJ03_RS08745;old_locus_tag=CYJ03_008735
NZ_PJUP02000023.1	Protein Homology	CDS	15929	17293	.	+	0	ID=cds-WP_104052303.1;Parent=gene-CYJ03_RS08745;Dbxref=GenBank:WP_104052303.1;Name=WP_104052303.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=CYJ03_RS08745;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_104052303.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	17369	18334	.	+	.	ID=gene-CYJ03_RS08750;Name=CYJ03_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08750;old_locus_tag=CYJ03_008740
NZ_PJUP02000023.1	Protein Homology	CDS	17369	18334	.	+	0	ID=cds-WP_014614805.1;Parent=gene-CYJ03_RS08750;Dbxref=GenBank:WP_014614805.1;Name=WP_014614805.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CYJ03_RS08750;product=ribose-phosphate diphosphokinase;protein_id=WP_014614805.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	18472	19122	.	+	.	ID=gene-CYJ03_RS08755;Name=CYJ03_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08755;old_locus_tag=CYJ03_008745
NZ_PJUP02000023.1	Protein Homology	CDS	18472	19122	.	+	0	ID=cds-WP_014614804.1;Parent=gene-CYJ03_RS08755;Dbxref=GenBank:WP_014614804.1;Name=WP_014614804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614804.1;locus_tag=CYJ03_RS08755;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_014614804.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	19582	20154	.	+	.	ID=gene-CYJ03_RS08760;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CYJ03_RS08760;old_locus_tag=CYJ03_008750
NZ_PJUP02000023.1	Protein Homology	CDS	19582	20154	.	+	0	ID=cds-WP_014614803.1;Parent=gene-CYJ03_RS08760;Dbxref=GenBank:WP_014614803.1;Name=WP_014614803.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426510.1;locus_tag=CYJ03_RS08760;product=aminoacyl-tRNA hydrolase;protein_id=WP_014614803.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	20160	23663	.	+	.	ID=gene-CYJ03_RS08765;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CYJ03_RS08765;old_locus_tag=CYJ03_008755
NZ_PJUP02000023.1	Protein Homology	CDS	20160	23663	.	+	0	ID=cds-WP_373408326.1;Parent=gene-CYJ03_RS08765;Dbxref=GenBank:WP_373408326.1;Name=WP_373408326.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=CYJ03_RS08765;product=transcription-repair coupling factor;protein_id=WP_373408326.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	23653	25185	.	+	.	ID=gene-CYJ03_RS08770;Name=CYJ03_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08770;old_locus_tag=CYJ03_008760
NZ_PJUP02000023.1	Protein Homology	CDS	23653	25185	.	+	0	ID=cds-WP_104052305.1;Parent=gene-CYJ03_RS08770;Dbxref=GenBank:WP_104052305.1;Name=WP_104052305.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=CYJ03_RS08770;product=oligosaccharide flippase family protein;protein_id=WP_104052305.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	25182	26366	.	+	.	ID=gene-CYJ03_RS08775;Name=CYJ03_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08775;old_locus_tag=CYJ03_008765
NZ_PJUP02000023.1	Protein Homology	CDS	25182	26366	.	+	0	ID=cds-WP_104052306.1;Parent=gene-CYJ03_RS08775;Dbxref=GenBank:WP_104052306.1;Name=WP_104052306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614800.1;locus_tag=CYJ03_RS08775;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_104052306.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	26356	26613	.	+	.	ID=gene-CYJ03_RS08780;Name=CYJ03_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08780;old_locus_tag=CYJ03_008770
NZ_PJUP02000023.1	Protein Homology	CDS	26356	26613	.	+	0	ID=cds-WP_014614799.1;Parent=gene-CYJ03_RS08780;Dbxref=GenBank:WP_014614799.1;Name=WP_014614799.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169417.1;locus_tag=CYJ03_RS08780;product=RNA-binding S4 domain-containing protein;protein_id=WP_014614799.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	26641	27030	.	+	.	ID=gene-CYJ03_RS08785;Name=CYJ03_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08785;old_locus_tag=CYJ03_008775
NZ_PJUP02000023.1	Protein Homology	CDS	26641	27030	.	+	0	ID=cds-WP_100004573.1;Parent=gene-CYJ03_RS08785;Dbxref=GenBank:WP_100004573.1;Name=WP_100004573.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165010.1;locus_tag=CYJ03_RS08785;product=FtsB family cell division protein;protein_id=WP_100004573.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	27170	27547	.	+	.	ID=gene-CYJ03_RS08790;Name=CYJ03_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08790;old_locus_tag=CYJ03_008780
NZ_PJUP02000023.1	Protein Homology	CDS	27170	27547	.	+	0	ID=cds-WP_014614797.1;Parent=gene-CYJ03_RS08790;Dbxref=GenBank:WP_014614797.1;Name=WP_014614797.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=CYJ03_RS08790;product=S1 domain-containing RNA-binding protein;protein_id=WP_014614797.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	27630	28919	.	+	.	ID=gene-CYJ03_RS08795;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CYJ03_RS08795;old_locus_tag=CYJ03_008785
NZ_PJUP02000023.1	Protein Homology	CDS	27630	28919	.	+	0	ID=cds-WP_037543956.1;Parent=gene-CYJ03_RS08795;Dbxref=GenBank:WP_037543956.1;Name=WP_037543956.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220126.1;locus_tag=CYJ03_RS08795;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_037543956.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	28909	29448	.	+	.	ID=gene-CYJ03_RS08800;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CYJ03_RS08800;old_locus_tag=CYJ03_008790
NZ_PJUP02000023.1	Protein Homology	CDS	28909	29448	.	+	0	ID=cds-WP_014614795.1;Parent=gene-CYJ03_RS08800;Dbxref=GenBank:WP_014614795.1;Name=WP_014614795.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=CYJ03_RS08800;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014614795.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	29564	31678	.	+	.	ID=gene-CYJ03_RS08805;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=CYJ03_RS08805;old_locus_tag=CYJ03_008795
NZ_PJUP02000023.1	Protein Homology	CDS	29564	31678	.	+	0	ID=cds-WP_015728595.1;Parent=gene-CYJ03_RS08805;Dbxref=GenBank:WP_015728595.1;Name=WP_015728595.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=CYJ03_RS08805;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_015728595.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	32133	33017	.	+	.	ID=gene-CYJ03_RS08810;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CYJ03_RS08810;old_locus_tag=CYJ03_008800
NZ_PJUP02000023.1	Protein Homology	CDS	32133	33017	.	+	0	ID=cds-WP_014614793.1;Parent=gene-CYJ03_RS08810;Dbxref=GenBank:WP_014614793.1;Name=WP_014614793.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165006.1;locus_tag=CYJ03_RS08810;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014614793.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	33541	34470	.	+	.	ID=gene-CYJ03_RS08815;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CYJ03_RS08815;old_locus_tag=CYJ03_008805
NZ_PJUP02000023.1	Protein Homology	CDS	33541	34470	.	+	0	ID=cds-WP_014614792.1;Parent=gene-CYJ03_RS08815;Dbxref=GenBank:WP_014614792.1;Name=WP_014614792.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=CYJ03_RS08815;product=cysteine synthase A;protein_id=WP_014614792.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	34692	35483	.	+	.	ID=gene-CYJ03_RS08820;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CYJ03_RS08820;old_locus_tag=CYJ03_008810
NZ_PJUP02000023.1	Protein Homology	CDS	34692	35483	.	+	0	ID=cds-WP_101431400.1;Parent=gene-CYJ03_RS08820;Dbxref=GenBank:WP_101431400.1;Name=WP_101431400.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=CYJ03_RS08820;product=dihydropteroate synthase;protein_id=WP_101431400.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	35473	35844	.	+	.	ID=gene-CYJ03_RS08825;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08825;old_locus_tag=CYJ03_008815
NZ_PJUP02000023.1	Protein Homology	CDS	35473	35844	.	+	0	ID=cds-WP_014614790.1;Parent=gene-CYJ03_RS08825;Dbxref=GenBank:WP_014614790.1;Name=WP_014614790.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614790.1;locus_tag=CYJ03_RS08825;product=dihydroneopterin aldolase;protein_id=WP_014614790.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	35837	36322	.	+	.	ID=gene-CYJ03_RS08830;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CYJ03_RS08830;old_locus_tag=CYJ03_008820
NZ_PJUP02000023.1	Protein Homology	CDS	35837	36322	.	+	0	ID=cds-WP_020220407.1;Parent=gene-CYJ03_RS08830;Dbxref=GenBank:WP_020220407.1;Name=WP_020220407.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165002.1;locus_tag=CYJ03_RS08830;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_020220407.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	36367	37359	.	+	.	ID=gene-CYJ03_RS08835;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08835;old_locus_tag=CYJ03_008825
NZ_PJUP02000023.1	Protein Homology	CDS	36367	37359	.	+	0	ID=cds-WP_014614788.1;Parent=gene-CYJ03_RS08835;Dbxref=GenBank:WP_014614788.1;Name=WP_014614788.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=CYJ03_RS08835;product=tRNA dihydrouridine synthase DusB;protein_id=WP_014614788.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	37382	38869	.	+	.	ID=gene-CYJ03_RS08840;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CYJ03_RS08840;old_locus_tag=CYJ03_008830
NZ_PJUP02000023.1	Protein Homology	CDS	37382	38869	.	+	0	ID=cds-WP_104052307.1;Parent=gene-CYJ03_RS08840;Dbxref=GenBank:WP_104052307.1;Name=WP_104052307.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499070.1;locus_tag=CYJ03_RS08840;product=lysine--tRNA ligase;protein_id=WP_104052307.1;transl_table=11
NZ_PJUP02000023.1	RefSeq	gene	39281	39395	.	+	.	ID=gene-CYJ03_RS08845;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ03_RS08845;old_locus_tag=CYJ03_008835
NZ_PJUP02000023.1	cmsearch	rRNA	39281	39395	.	+	.	ID=rna-CYJ03_RS08845;Parent=gene-CYJ03_RS08845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS08845;product=5S ribosomal RNA
NZ_PJUP02000023.1	cmsearch	exon	39281	39395	.	+	.	ID=exon-CYJ03_RS08845-1;Parent=rna-CYJ03_RS08845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS08845;product=5S ribosomal RNA
NZ_PJUP02000023.1	RefSeq	gene	39405	39480	.	+	.	ID=gene-CYJ03_RS08850;Name=CYJ03_RS08850;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08850;old_locus_tag=CYJ03_008840
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39405	39480	.	+	.	ID=rna-CYJ03_RS08850;Parent=gene-CYJ03_RS08850;anticodon=(pos:39438..39440);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08850;product=tRNA-Val
NZ_PJUP02000023.1	tRNAscan-SE	exon	39405	39480	.	+	.	ID=exon-CYJ03_RS08850-1;Parent=rna-CYJ03_RS08850;anticodon=(pos:39438..39440);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08850;product=tRNA-Val
NZ_PJUP02000023.1	RefSeq	gene	39483	39558	.	+	.	ID=gene-CYJ03_RS08855;Name=CYJ03_RS08855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08855;old_locus_tag=CYJ03_008845
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39483	39558	.	+	.	ID=rna-CYJ03_RS08855;Parent=gene-CYJ03_RS08855;anticodon=(pos:39516..39518);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08855;product=tRNA-Thr
NZ_PJUP02000023.1	tRNAscan-SE	exon	39483	39558	.	+	.	ID=exon-CYJ03_RS08855-1;Parent=rna-CYJ03_RS08855;anticodon=(pos:39516..39518);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08855;product=tRNA-Thr
NZ_PJUP02000023.1	RefSeq	gene	39565	39637	.	+	.	ID=gene-CYJ03_RS08860;Name=CYJ03_RS08860;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08860;old_locus_tag=CYJ03_008850
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39565	39637	.	+	.	ID=rna-CYJ03_RS08860;Parent=gene-CYJ03_RS08860;anticodon=(pos:39598..39600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08860;product=tRNA-Lys
NZ_PJUP02000023.1	tRNAscan-SE	exon	39565	39637	.	+	.	ID=exon-CYJ03_RS08860-1;Parent=rna-CYJ03_RS08860;anticodon=(pos:39598..39600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08860;product=tRNA-Lys
NZ_PJUP02000023.1	RefSeq	gene	39656	39730	.	+	.	ID=gene-CYJ03_RS08865;Name=CYJ03_RS08865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08865;old_locus_tag=CYJ03_008855
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39656	39730	.	+	.	ID=rna-CYJ03_RS08865;Parent=gene-CYJ03_RS08865;anticodon=(pos:39688..39690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08865;product=tRNA-Gly
NZ_PJUP02000023.1	tRNAscan-SE	exon	39656	39730	.	+	.	ID=exon-CYJ03_RS08865-1;Parent=rna-CYJ03_RS08865;anticodon=(pos:39688..39690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08865;product=tRNA-Gly
NZ_PJUP02000023.1	RefSeq	gene	39739	39827	.	+	.	ID=gene-CYJ03_RS08870;Name=CYJ03_RS08870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08870;old_locus_tag=CYJ03_008860
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39739	39827	.	+	.	ID=rna-CYJ03_RS08870;Parent=gene-CYJ03_RS08870;anticodon=(pos:39773..39775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08870;product=tRNA-Leu
NZ_PJUP02000023.1	tRNAscan-SE	exon	39739	39827	.	+	.	ID=exon-CYJ03_RS08870-1;Parent=rna-CYJ03_RS08870;anticodon=(pos:39773..39775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08870;product=tRNA-Leu
NZ_PJUP02000023.1	RefSeq	gene	39839	39915	.	+	.	ID=gene-CYJ03_RS08875;Name=CYJ03_RS08875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08875;old_locus_tag=CYJ03_008865
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39839	39915	.	+	.	ID=rna-CYJ03_RS08875;Parent=gene-CYJ03_RS08875;anticodon=(pos:39873..39875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08875;product=tRNA-Arg
NZ_PJUP02000023.1	tRNAscan-SE	exon	39839	39915	.	+	.	ID=exon-CYJ03_RS08875-1;Parent=rna-CYJ03_RS08875;anticodon=(pos:39873..39875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08875;product=tRNA-Arg
NZ_PJUP02000023.1	RefSeq	gene	39925	39998	.	+	.	ID=gene-CYJ03_RS08880;Name=CYJ03_RS08880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08880;old_locus_tag=CYJ03_008870
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	39925	39998	.	+	.	ID=rna-CYJ03_RS08880;Parent=gene-CYJ03_RS08880;anticodon=(pos:39959..39961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08880;product=tRNA-Pro
NZ_PJUP02000023.1	tRNAscan-SE	exon	39925	39998	.	+	.	ID=exon-CYJ03_RS08880-1;Parent=rna-CYJ03_RS08880;anticodon=(pos:39959..39961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08880;product=tRNA-Pro
NZ_PJUP02000023.1	RefSeq	gene	40016	40091	.	+	.	ID=gene-CYJ03_RS08885;Name=CYJ03_RS08885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08885;old_locus_tag=CYJ03_008875
NZ_PJUP02000023.1	tRNAscan-SE	tRNA	40016	40091	.	+	.	ID=rna-CYJ03_RS08885;Parent=gene-CYJ03_RS08885;anticodon=(pos:40049..40051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08885;product=tRNA-Ala
NZ_PJUP02000023.1	tRNAscan-SE	exon	40016	40091	.	+	.	ID=exon-CYJ03_RS08885-1;Parent=rna-CYJ03_RS08885;anticodon=(pos:40049..40051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08885;product=tRNA-Ala
NZ_PJUP02000023.1	RefSeq	gene	40225	40760	.	+	.	ID=gene-CYJ03_RS12450;Name=CYJ03_RS12450;end_range=40760,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12450;partial=true
NZ_PJUP02000023.1	cmsearch	rRNA	40225	40760	.	+	.	ID=rna-CYJ03_RS12450;Parent=gene-CYJ03_RS12450;Dbxref=RFAM:RF00177;end_range=40760,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12450;partial=true;product=16S ribosomal RNA
NZ_PJUP02000023.1	cmsearch	exon	40225	40760	.	+	.	ID=exon-CYJ03_RS12450-1;Parent=rna-CYJ03_RS12450;Dbxref=RFAM:RF00177;end_range=40760,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12450;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUP02000001.1 1 161439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000001.1	RefSeq	region	1	161439	.	+	.	ID=NZ_PJUP02000001.1:1..161439;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000001.1	RefSeq	gene	1	399	.	+	.	ID=gene-CYJ03_RS12365;Name=CYJ03_RS12365;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12365;partial=true;start_range=.,1
NZ_PJUP02000001.1	cmsearch	rRNA	1	399	.	+	.	ID=rna-CYJ03_RS12365;Parent=gene-CYJ03_RS12365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12365;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PJUP02000001.1	cmsearch	exon	1	399	.	+	.	ID=exon-CYJ03_RS12365-1;Parent=rna-CYJ03_RS12365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12365;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PJUP02000001.1	RefSeq	gene	481	595	.	+	.	ID=gene-CYJ03_RS00005;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ03_RS00005;old_locus_tag=CYJ03_000005
NZ_PJUP02000001.1	cmsearch	rRNA	481	595	.	+	.	ID=rna-CYJ03_RS00005;Parent=gene-CYJ03_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS00005;product=5S ribosomal RNA
NZ_PJUP02000001.1	cmsearch	exon	481	595	.	+	.	ID=exon-CYJ03_RS00005-1;Parent=rna-CYJ03_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS00005;product=5S ribosomal RNA
NZ_PJUP02000001.1	RefSeq	gene	683	2611	.	+	.	ID=gene-CYJ03_RS00010;Name=CYJ03_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00010;old_locus_tag=CYJ03_000010
NZ_PJUP02000001.1	Protein Homology	CDS	683	2611	.	+	0	ID=cds-WP_104052028.1;Parent=gene-CYJ03_RS00010;Dbxref=GenBank:WP_104052028.1;Name=WP_104052028.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=CYJ03_RS00010;product=FUSC family protein;protein_id=WP_104052028.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	2665	4074	.	-	.	ID=gene-CYJ03_RS00015;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CYJ03_RS00015;old_locus_tag=CYJ03_000015
NZ_PJUP02000001.1	Protein Homology	CDS	2665	4074	.	-	0	ID=cds-WP_104052029.1;Parent=gene-CYJ03_RS00015;Dbxref=GenBank:WP_104052029.1;Name=WP_104052029.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614785.1;locus_tag=CYJ03_RS00015;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_104052029.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	4184	5071	.	+	.	ID=gene-CYJ03_RS00020;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=CYJ03_RS00020;old_locus_tag=CYJ03_000020
NZ_PJUP02000001.1	Protein Homology	CDS	4184	5071	.	+	0	ID=cds-WP_101457562.1;Parent=gene-CYJ03_RS00020;Dbxref=GenBank:WP_101457562.1;Name=WP_101457562.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CYJ03_RS00020;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_101457562.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	5073	5630	.	+	.	ID=gene-CYJ03_RS00025;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=CYJ03_RS00025;old_locus_tag=CYJ03_000025
NZ_PJUP02000001.1	Protein Homology	CDS	5073	5630	.	+	0	ID=cds-WP_014614783.1;Parent=gene-CYJ03_RS00025;Dbxref=GenBank:WP_014614783.1;Name=WP_014614783.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614783.1;locus_tag=CYJ03_RS00025;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_014614783.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	direct_repeat	5781	7403	.	+	.	ID=id-NZ_PJUP02000001.1:5781..7403;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5781..5816;rpt_unit_seq=gttttagtactctgtcaaattaggtataagtgatac
NZ_PJUP02000001.1	RefSeq	gene	7726	10893	.	+	.	ID=gene-CYJ03_RS00030;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=CYJ03_RS00030;old_locus_tag=CYJ03_000030
NZ_PJUP02000001.1	Protein Homology	CDS	7726	10893	.	+	0	ID=cds-WP_104052030.1;Parent=gene-CYJ03_RS00030;Dbxref=GenBank:WP_104052030.1;Name=WP_104052030.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460848.1;locus_tag=CYJ03_RS00030;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_104052030.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	10893	11795	.	+	.	ID=gene-CYJ03_RS00035;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=CYJ03_RS00035;old_locus_tag=CYJ03_000035
NZ_PJUP02000001.1	Protein Homology	CDS	10893	11795	.	+	0	ID=cds-WP_101457363.1;Parent=gene-CYJ03_RS00035;Dbxref=GenBank:WP_101457363.1;Name=WP_101457363.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460847.1;locus_tag=CYJ03_RS00035;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_101457363.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	11800	12108	.	+	.	ID=gene-CYJ03_RS00040;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CYJ03_RS00040;old_locus_tag=CYJ03_000040
NZ_PJUP02000001.1	Protein Homology	CDS	11800	12108	.	+	0	ID=cds-WP_101457362.1;Parent=gene-CYJ03_RS00040;Dbxref=GenBank:WP_101457362.1;Name=WP_101457362.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573636.1;locus_tag=CYJ03_RS00040;product=CRISPR-associated endonuclease Cas2;protein_id=WP_101457362.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	12121	13116	.	+	.	ID=gene-CYJ03_RS00045;Name=CYJ03_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00045;old_locus_tag=CYJ03_000045
NZ_PJUP02000001.1	Protein Homology	CDS	12121	13116	.	+	0	ID=cds-WP_104052031.1;Parent=gene-CYJ03_RS00045;Dbxref=GenBank:WP_104052031.1;Name=WP_104052031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424986.1;locus_tag=CYJ03_RS00045;product=OLD family protein;protein_id=WP_104052031.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	13754	14959	.	-	.	ID=gene-CYJ03_RS00050;Name=CYJ03_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00050;old_locus_tag=CYJ03_000050
NZ_PJUP02000001.1	Protein Homology	CDS	13754	14959	.	-	0	ID=cds-WP_014614780.1;Parent=gene-CYJ03_RS00050;Dbxref=GenBank:WP_014614780.1;Name=WP_014614780.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CYJ03_RS00050;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014614780.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	15124	15585	.	+	.	ID=gene-CYJ03_RS00055;Name=CYJ03_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00055;old_locus_tag=CYJ03_000055
NZ_PJUP02000001.1	Protein Homology	CDS	15124	15585	.	+	0	ID=cds-WP_014614779.1;Parent=gene-CYJ03_RS00055;Dbxref=GenBank:WP_014614779.1;Name=WP_014614779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CYJ03_RS00055;product=CtsR family transcriptional regulator;protein_id=WP_014614779.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	15599	16129	.	+	.	ID=gene-CYJ03_RS00060;Name=CYJ03_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00060;old_locus_tag=CYJ03_000060
NZ_PJUP02000001.1	Protein Homology	CDS	15599	16129	.	+	0	ID=cds-WP_014614778.1;Parent=gene-CYJ03_RS00060;Dbxref=GenBank:WP_014614778.1;Name=WP_014614778.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169091.1;locus_tag=CYJ03_RS00060;product=UvrB/UvrC motif-containing protein;protein_id=WP_014614778.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	16119	17123	.	+	.	ID=gene-CYJ03_RS00065;Name=CYJ03_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00065;old_locus_tag=CYJ03_000065
NZ_PJUP02000001.1	Protein Homology	CDS	16119	17123	.	+	0	ID=cds-WP_104052032.1;Parent=gene-CYJ03_RS00065;Dbxref=GenBank:WP_104052032.1;Name=WP_104052032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169090.1;locus_tag=CYJ03_RS00065;product=protein arginine kinase;protein_id=WP_104052032.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	17139	19598	.	+	.	ID=gene-CYJ03_RS00070;Name=CYJ03_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00070;old_locus_tag=CYJ03_000070
NZ_PJUP02000001.1	Protein Homology	CDS	17139	19598	.	+	0	ID=cds-WP_014614776.1;Parent=gene-CYJ03_RS00070;Dbxref=GenBank:WP_014614776.1;Name=WP_014614776.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499078.1;locus_tag=CYJ03_RS00070;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_014614776.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	20279	21130	.	+	.	ID=gene-CYJ03_RS00075;Name=CYJ03_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00075;old_locus_tag=CYJ03_000075
NZ_PJUP02000001.1	Protein Homology	CDS	20279	21130	.	+	0	ID=cds-WP_037543948.1;Parent=gene-CYJ03_RS00075;Dbxref=GenBank:WP_037543948.1;Name=WP_037543948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728602.1;locus_tag=CYJ03_RS00075;product=hypothetical protein;protein_id=WP_037543948.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	21127	22347	.	+	.	ID=gene-CYJ03_RS00080;Name=CYJ03_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00080;old_locus_tag=CYJ03_000080
NZ_PJUP02000001.1	Protein Homology	CDS	21127	22347	.	+	0	ID=cds-WP_104052033.1;Parent=gene-CYJ03_RS00080;Dbxref=GenBank:WP_104052033.1;Name=WP_104052033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614774.1;locus_tag=CYJ03_RS00080;product=YcaO-like family protein;protein_id=WP_104052033.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	22367	23179	.	+	.	ID=gene-CYJ03_RS00085;Name=CYJ03_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00085;old_locus_tag=CYJ03_000085
NZ_PJUP02000001.1	Protein Homology	CDS	22367	23179	.	+	0	ID=cds-WP_037543946.1;Parent=gene-CYJ03_RS00085;Dbxref=GenBank:WP_037543946.1;Name=WP_037543946.1;Ontology_term=GO:0031179,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=peptide modification|0031179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614773.1;locus_tag=CYJ03_RS00085;product=SagB family peptide dehydrogenase;protein_id=WP_037543946.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	23179	24138	.	+	.	ID=gene-CYJ03_RS00090;Name=CYJ03_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00090;old_locus_tag=CYJ03_000090
NZ_PJUP02000001.1	Protein Homology	CDS	23179	24138	.	+	0	ID=cds-WP_099986825.1;Parent=gene-CYJ03_RS00090;Dbxref=GenBank:WP_099986825.1;Name=WP_099986825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614772.1;locus_tag=CYJ03_RS00090;product=hypothetical protein;protein_id=WP_099986825.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	24153	24857	.	+	.	ID=gene-CYJ03_RS00095;Name=CYJ03_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00095;old_locus_tag=CYJ03_000095
NZ_PJUP02000001.1	Protein Homology	CDS	24153	24857	.	+	0	ID=cds-WP_104052034.1;Parent=gene-CYJ03_RS00095;Dbxref=GenBank:WP_104052034.1;Name=WP_104052034.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614771.1;locus_tag=CYJ03_RS00095;product=ABC transporter ATP-binding protein;protein_id=WP_104052034.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	24844	25590	.	+	.	ID=gene-CYJ03_RS00100;Name=CYJ03_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00100;old_locus_tag=CYJ03_000100
NZ_PJUP02000001.1	Protein Homology	CDS	24844	25590	.	+	0	ID=cds-WP_015728605.1;Parent=gene-CYJ03_RS00100;Dbxref=GenBank:WP_015728605.1;Name=WP_015728605.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013245.7;locus_tag=CYJ03_RS00100;product=ABC transporter permease;protein_id=WP_015728605.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	25977	27347	.	+	.	ID=gene-CYJ03_RS00105;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00105;old_locus_tag=CYJ03_000105
NZ_PJUP02000001.1	Protein Homology	CDS	25977	27347	.	+	0	ID=cds-WP_096533775.1;Parent=gene-CYJ03_RS00105;Dbxref=GenBank:WP_096533775.1;Name=WP_096533775.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166689.1;locus_tag=CYJ03_RS00105;product=DNA repair protein RadA;protein_id=WP_096533775.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	27366	28427	.	+	.	ID=gene-CYJ03_RS00110;Name=CYJ03_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00110;old_locus_tag=CYJ03_000110
NZ_PJUP02000001.1	Protein Homology	CDS	27366	28427	.	+	0	ID=cds-WP_104052035.1;Parent=gene-CYJ03_RS00110;Dbxref=GenBank:WP_104052035.1;Name=WP_104052035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614768.1;locus_tag=CYJ03_RS00110;product=PIN/TRAM domain-containing protein;protein_id=WP_104052035.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	28428	29126	.	+	.	ID=gene-CYJ03_RS00115;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CYJ03_RS00115;old_locus_tag=CYJ03_000115
NZ_PJUP02000001.1	Protein Homology	CDS	28428	29126	.	+	0	ID=cds-WP_020219942.1;Parent=gene-CYJ03_RS00115;Dbxref=GenBank:WP_020219942.1;Name=WP_020219942.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=CYJ03_RS00115;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_020219942.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	29119	29598	.	+	.	ID=gene-CYJ03_RS00120;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CYJ03_RS00120;old_locus_tag=CYJ03_000120
NZ_PJUP02000001.1	Protein Homology	CDS	29119	29598	.	+	0	ID=cds-WP_014614766.1;Parent=gene-CYJ03_RS00120;Dbxref=GenBank:WP_014614766.1;Name=WP_014614766.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614766.1;locus_tag=CYJ03_RS00120;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_014614766.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	29675	31129	.	+	.	ID=gene-CYJ03_RS00125;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CYJ03_RS00125;old_locus_tag=CYJ03_000125
NZ_PJUP02000001.1	Protein Homology	CDS	29675	31129	.	+	0	ID=cds-WP_037543943.1;Parent=gene-CYJ03_RS00125;Dbxref=GenBank:WP_037543943.1;Name=WP_037543943.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465549.1;locus_tag=CYJ03_RS00125;product=glutamate--tRNA ligase;protein_id=WP_037543943.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	31517	32182	.	+	.	ID=gene-CYJ03_RS00130;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CYJ03_RS00130;old_locus_tag=CYJ03_000130
NZ_PJUP02000001.1	Protein Homology	CDS	31517	32182	.	+	0	ID=cds-WP_172425792.1;Parent=gene-CYJ03_RS00130;Dbxref=GenBank:WP_172425792.1;Name=WP_172425792.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723047.1;locus_tag=CYJ03_RS00130;product=serine O-acetyltransferase;protein_id=WP_172425792.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	32166	33566	.	+	.	ID=gene-CYJ03_RS00135;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CYJ03_RS00135;old_locus_tag=CYJ03_000135
NZ_PJUP02000001.1	Protein Homology	CDS	32166	33566	.	+	0	ID=cds-WP_014614763.1;Parent=gene-CYJ03_RS00135;Dbxref=GenBank:WP_014614763.1;Name=WP_014614763.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=CYJ03_RS00135;product=cysteine--tRNA ligase;protein_id=WP_014614763.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	33559	33960	.	+	.	ID=gene-CYJ03_RS00140;Name=CYJ03_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00140;old_locus_tag=CYJ03_000140
NZ_PJUP02000001.1	Protein Homology	CDS	33559	33960	.	+	0	ID=cds-WP_014614762.1;Parent=gene-CYJ03_RS00140;Dbxref=GenBank:WP_014614762.1;Name=WP_014614762.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=CYJ03_RS00140;product=Mini-ribonuclease 3;protein_id=WP_014614762.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	33966	34715	.	+	.	ID=gene-CYJ03_RS00145;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00145;old_locus_tag=CYJ03_000145
NZ_PJUP02000001.1	Protein Homology	CDS	33966	34715	.	+	0	ID=cds-WP_101458126.1;Parent=gene-CYJ03_RS00145;Dbxref=GenBank:WP_101458126.1;Name=WP_101458126.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=CYJ03_RS00145;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_101458126.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	34719	35243	.	+	.	ID=gene-CYJ03_RS00150;Name=CYJ03_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00150;old_locus_tag=CYJ03_000150
NZ_PJUP02000001.1	Protein Homology	CDS	34719	35243	.	+	0	ID=cds-WP_104052055.1;Parent=gene-CYJ03_RS00150;Dbxref=GenBank:WP_104052055.1;Name=WP_104052055.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424292.1;locus_tag=CYJ03_RS00150;product=NYN domain-containing protein;protein_id=WP_104052055.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	35320	35892	.	+	.	ID=gene-CYJ03_RS00155;Name=CYJ03_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00155;old_locus_tag=CYJ03_000155
NZ_PJUP02000001.1	Protein Homology	CDS	35320	35892	.	+	0	ID=cds-WP_037543938.1;Parent=gene-CYJ03_RS00155;Dbxref=GenBank:WP_037543938.1;Name=WP_037543938.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728609.1;locus_tag=CYJ03_RS00155;product=RNA polymerase sigma factor;protein_id=WP_037543938.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	35964	36107	.	+	.	ID=gene-CYJ03_RS00160;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ03_RS00160;old_locus_tag=CYJ03_000160
NZ_PJUP02000001.1	Protein Homology	CDS	35964	36107	.	+	0	ID=cds-WP_075773636.1;Parent=gene-CYJ03_RS00160;Dbxref=GenBank:WP_075773636.1;Name=WP_075773636.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=CYJ03_RS00160;product=50S ribosomal protein L33;protein_id=WP_075773636.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	36125	36304	.	+	.	ID=gene-CYJ03_RS00165;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CYJ03_RS00165;old_locus_tag=CYJ03_000165
NZ_PJUP02000001.1	Protein Homology	CDS	36125	36304	.	+	0	ID=cds-WP_014614757.1;Parent=gene-CYJ03_RS00165;Dbxref=GenBank:WP_014614757.1;Name=WP_014614757.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=CYJ03_RS00165;product=preprotein translocase subunit SecE;protein_id=WP_014614757.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	36323	36871	.	+	.	ID=gene-CYJ03_RS00170;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CYJ03_RS00170;old_locus_tag=CYJ03_000170
NZ_PJUP02000001.1	Protein Homology	CDS	36323	36871	.	+	0	ID=cds-WP_014614756.1;Parent=gene-CYJ03_RS00170;Dbxref=GenBank:WP_014614756.1;Name=WP_014614756.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CYJ03_RS00170;product=transcription termination/antitermination protein NusG;protein_id=WP_014614756.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	37036	37458	.	+	.	ID=gene-CYJ03_RS00175;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CYJ03_RS00175;old_locus_tag=CYJ03_000175
NZ_PJUP02000001.1	Protein Homology	CDS	37036	37458	.	+	0	ID=cds-WP_014614755.1;Parent=gene-CYJ03_RS00175;Dbxref=GenBank:WP_014614755.1;Name=WP_014614755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CYJ03_RS00175;product=50S ribosomal protein L11;protein_id=WP_014614755.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	37650	38345	.	+	.	ID=gene-CYJ03_RS00180;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00180;old_locus_tag=CYJ03_000180
NZ_PJUP02000001.1	Protein Homology	CDS	37650	38345	.	+	0	ID=cds-WP_014614754.1;Parent=gene-CYJ03_RS00180;Dbxref=GenBank:WP_014614754.1;Name=WP_014614754.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CYJ03_RS00180;product=50S ribosomal protein L1;protein_id=WP_014614754.1;transl_table=11
NZ_PJUP02000001.1	cmsearch	sequence_feature	38443	38583	.	+	.	ID=id-NZ_PJUP02000001.1:38443..38583;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00557,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000001.1	RefSeq	gene	38633	39133	.	+	.	ID=gene-CYJ03_RS00185;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS00185;old_locus_tag=CYJ03_000185
NZ_PJUP02000001.1	Protein Homology	CDS	38633	39133	.	+	0	ID=cds-WP_014614753.1;Parent=gene-CYJ03_RS00185;Dbxref=GenBank:WP_014614753.1;Name=WP_014614753.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=CYJ03_RS00185;product=50S ribosomal protein L10;protein_id=WP_014614753.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	39174	39539	.	+	.	ID=gene-CYJ03_RS00190;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CYJ03_RS00190;old_locus_tag=CYJ03_000190
NZ_PJUP02000001.1	Protein Homology	CDS	39174	39539	.	+	0	ID=cds-WP_014614752.1;Parent=gene-CYJ03_RS00190;Dbxref=GenBank:WP_014614752.1;Name=WP_014614752.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CYJ03_RS00190;product=50S ribosomal protein L7/L12;protein_id=WP_014614752.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	39617	40225	.	+	.	ID=gene-CYJ03_RS00195;Name=CYJ03_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00195;old_locus_tag=CYJ03_000195
NZ_PJUP02000001.1	Protein Homology	CDS	39617	40225	.	+	0	ID=cds-WP_014614751.1;Parent=gene-CYJ03_RS00195;Dbxref=GenBank:WP_014614751.1;Name=WP_014614751.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614751.1;locus_tag=CYJ03_RS00195;product=class I SAM-dependent methyltransferase;protein_id=WP_014614751.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	40438	43992	.	+	.	ID=gene-CYJ03_RS00200;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00200;old_locus_tag=CYJ03_000200
NZ_PJUP02000001.1	Protein Homology	CDS	40438	43992	.	+	0	ID=cds-WP_014614750.1;Parent=gene-CYJ03_RS00200;Dbxref=GenBank:WP_014614750.1;Name=WP_014614750.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614750.1;locus_tag=CYJ03_RS00200;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_014614750.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	44227	47847	.	+	.	ID=gene-CYJ03_RS00205;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CYJ03_RS00205;old_locus_tag=CYJ03_000205
NZ_PJUP02000001.1	Protein Homology	CDS	44227	47847	.	+	0	ID=cds-WP_014614749.1;Parent=gene-CYJ03_RS00205;Dbxref=GenBank:WP_014614749.1;Name=WP_014614749.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=CYJ03_RS00205;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_014614749.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	48025	48279	.	+	.	ID=gene-CYJ03_RS00210;Name=CYJ03_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00210;old_locus_tag=CYJ03_000210
NZ_PJUP02000001.1	Protein Homology	CDS	48025	48279	.	+	0	ID=cds-WP_014614748.1;Parent=gene-CYJ03_RS00210;Dbxref=GenBank:WP_014614748.1;Name=WP_014614748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=CYJ03_RS00210;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_014614748.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	48375	48788	.	+	.	ID=gene-CYJ03_RS00215;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CYJ03_RS00215;old_locus_tag=CYJ03_000215
NZ_PJUP02000001.1	Protein Homology	CDS	48375	48788	.	+	0	ID=cds-WP_014614747.1;Parent=gene-CYJ03_RS00215;Dbxref=GenBank:WP_014614747.1;Name=WP_014614747.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=CYJ03_RS00215;product=30S ribosomal protein S12;protein_id=WP_014614747.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	48869	49339	.	+	.	ID=gene-CYJ03_RS00220;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CYJ03_RS00220;old_locus_tag=CYJ03_000220
NZ_PJUP02000001.1	Protein Homology	CDS	48869	49339	.	+	0	ID=cds-WP_014614746.1;Parent=gene-CYJ03_RS00220;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CYJ03_RS00220;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	49482	51563	.	+	.	ID=gene-CYJ03_RS00225;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00225;old_locus_tag=CYJ03_000225
NZ_PJUP02000001.1	Protein Homology	CDS	49482	51563	.	+	0	ID=cds-WP_014614745.1;Parent=gene-CYJ03_RS00225;Dbxref=GenBank:WP_014614745.1;Name=WP_014614745.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=CYJ03_RS00225;product=elongation factor G;protein_id=WP_014614745.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	51745	52932	.	+	.	ID=gene-CYJ03_RS00230;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CYJ03_RS00230;old_locus_tag=CYJ03_000230
NZ_PJUP02000001.1	Protein Homology	CDS	51745	52932	.	+	0	ID=cds-WP_014614744.1;Parent=gene-CYJ03_RS00230;Dbxref=GenBank:WP_014614744.1;Name=WP_014614744.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166641.1;locus_tag=CYJ03_RS00230;product=elongation factor Tu;protein_id=WP_014614744.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	53045	53749	.	-	.	ID=gene-CYJ03_RS00235;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00235;old_locus_tag=CYJ03_000235
NZ_PJUP02000001.1	Protein Homology	CDS	53045	53749	.	-	0	ID=cds-WP_101457357.1;Parent=gene-CYJ03_RS00235;Dbxref=GenBank:WP_101457357.1;Name=WP_101457357.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=CYJ03_RS00235;product=acetolactate decarboxylase;protein_id=WP_101457357.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	54336	55523	.	-	.	ID=gene-CYJ03_RS00240;Name=CYJ03_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00240;old_locus_tag=CYJ03_000240
NZ_PJUP02000001.1	Protein Homology	CDS	54336	55523	.	-	0	ID=cds-WP_014614742.1;Parent=gene-CYJ03_RS00240;Dbxref=GenBank:WP_014614742.1;Name=WP_014614742.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614742.1;locus_tag=CYJ03_RS00240;product=amidohydrolase;protein_id=WP_014614742.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	55633	56823	.	+	.	ID=gene-CYJ03_RS00245;Name=CYJ03_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00245;old_locus_tag=CYJ03_000245
NZ_PJUP02000001.1	Protein Homology	CDS	55633	56823	.	+	0	ID=cds-WP_031253851.1;Parent=gene-CYJ03_RS00245;Dbxref=GenBank:WP_031253851.1;Name=WP_031253851.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=CYJ03_RS00245;product=glycine C-acetyltransferase;protein_id=WP_031253851.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	57031	57990	.	+	.	ID=gene-CYJ03_RS00250;Name=CYJ03_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00250;old_locus_tag=CYJ03_000250
NZ_PJUP02000001.1	Protein Homology	CDS	57031	57990	.	+	0	ID=cds-WP_104052056.1;Parent=gene-CYJ03_RS00250;Dbxref=GenBank:WP_104052056.1;Name=WP_104052056.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=CYJ03_RS00250;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_104052056.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	58185	58628	.	+	.	ID=gene-CYJ03_RS00255;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CYJ03_RS00255;old_locus_tag=CYJ03_000255;partial=true;pseudo=true;start_range=.,58185
NZ_PJUP02000001.1	Protein Homology	CDS	58185	58628	.	+	0	ID=cds-CYJ03_RS00255;Parent=gene-CYJ03_RS00255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ03_RS00255;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,58185;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	58814	60066	.	-	.	ID=gene-CYJ03_RS00260;Name=CYJ03_RS00260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS00260;old_locus_tag=CYJ03_000260;pseudo=true
NZ_PJUP02000001.1	Protein Homology	CDS	58814	60066	.	-	0	ID=cds-CYJ03_RS00260;Parent=gene-CYJ03_RS00260;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614739.1;locus_tag=CYJ03_RS00260;product=MDR family MFS transporter;pseudo=true;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	60209	60805	.	+	.	ID=gene-CYJ03_RS00265;Name=CYJ03_RS00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS00265;old_locus_tag=CYJ03_000265;pseudo=true
NZ_PJUP02000001.1	Protein Homology	CDS	60209	60805	.	+	0	ID=cds-CYJ03_RS00265;Parent=gene-CYJ03_RS00265;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ03_RS00265;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	61089	62171	.	+	.	ID=gene-CYJ03_RS00270;Name=CYJ03_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00270;old_locus_tag=CYJ03_000270
NZ_PJUP02000001.1	Protein Homology	CDS	61089	62171	.	+	0	ID=cds-WP_015728618.1;Parent=gene-CYJ03_RS00270;Dbxref=GenBank:WP_015728618.1;Name=WP_015728618.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166637.1;locus_tag=CYJ03_RS00270;product=branched-chain amino acid aminotransferase;protein_id=WP_015728618.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	62881	63873	.	-	.	ID=gene-CYJ03_RS00275;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=CYJ03_RS00275;old_locus_tag=CYJ03_000275
NZ_PJUP02000001.1	Protein Homology	CDS	62881	63873	.	-	0	ID=cds-WP_014614737.1;Parent=gene-CYJ03_RS00275;Dbxref=GenBank:WP_014614737.1;Name=WP_014614737.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614737.1;locus_tag=CYJ03_RS00275;product=sphingomyelin phosphodiesterase;protein_id=WP_014614737.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	64111	64809	.	+	.	ID=gene-CYJ03_RS00280;Name=CYJ03_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00280;old_locus_tag=CYJ03_000280
NZ_PJUP02000001.1	Protein Homology	CDS	64111	64809	.	+	0	ID=cds-WP_014614736.1;Parent=gene-CYJ03_RS00280;Dbxref=GenBank:WP_014614736.1;Name=WP_014614736.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614736.1;locus_tag=CYJ03_RS00280;product=HAD family hydrolase;protein_id=WP_014614736.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	65362	66027	.	-	.	ID=gene-CYJ03_RS00285;Name=CYJ03_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00285;old_locus_tag=CYJ03_000285
NZ_PJUP02000001.1	Protein Homology	CDS	65362	66027	.	-	0	ID=cds-WP_014614735.1;Parent=gene-CYJ03_RS00285;Dbxref=GenBank:WP_014614735.1;Name=WP_014614735.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728623.1;locus_tag=CYJ03_RS00285;product=deoxynucleoside kinase;protein_id=WP_014614735.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	66014	66637	.	-	.	ID=gene-CYJ03_RS00290;Name=CYJ03_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00290;old_locus_tag=CYJ03_000290
NZ_PJUP02000001.1	Protein Homology	CDS	66014	66637	.	-	0	ID=cds-WP_014614734.1;Parent=gene-CYJ03_RS00290;Dbxref=GenBank:WP_014614734.1;Name=WP_014614734.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614734.1;locus_tag=CYJ03_RS00290;product=deoxynucleoside kinase;protein_id=WP_014614734.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	66707	67180	.	+	.	ID=gene-CYJ03_RS00295;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00295;old_locus_tag=CYJ03_000295
NZ_PJUP02000001.1	Protein Homology	CDS	66707	67180	.	+	0	ID=cds-WP_014614733.1;Parent=gene-CYJ03_RS00295;Dbxref=GenBank:WP_014614733.1;Name=WP_014614733.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614733.1;locus_tag=CYJ03_RS00295;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014614733.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	67342	68208	.	+	.	ID=gene-CYJ03_RS00300;Name=CYJ03_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00300;old_locus_tag=CYJ03_000300
NZ_PJUP02000001.1	Protein Homology	CDS	67342	68208	.	+	0	ID=cds-WP_020219930.1;Parent=gene-CYJ03_RS00300;Dbxref=GenBank:WP_020219930.1;Name=WP_020219930.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728626.1;locus_tag=CYJ03_RS00300;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_020219930.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	68427	68720	.	+	.	ID=gene-CYJ03_RS00305;Name=CYJ03_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00305;old_locus_tag=CYJ03_000305
NZ_PJUP02000001.1	GeneMarkS-2+	CDS	68427	68720	.	+	0	ID=cds-WP_104052037.1;Parent=gene-CYJ03_RS00305;Dbxref=GenBank:WP_104052037.1;Name=WP_104052037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS00305;product=hypothetical protein;protein_id=WP_104052037.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	68740	70935	.	+	.	ID=gene-CYJ03_RS00310;Name=CYJ03_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00310;old_locus_tag=CYJ03_000310
NZ_PJUP02000001.1	Protein Homology	CDS	68740	70935	.	+	0	ID=cds-WP_104052038.1;Parent=gene-CYJ03_RS00310;Dbxref=GenBank:WP_104052038.1;Name=WP_104052038.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166672.1;locus_tag=CYJ03_RS00310;product=bacteriocin-associated integral membrane family protein;protein_id=WP_104052038.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	70935	71597	.	+	.	ID=gene-CYJ03_RS00315;Name=CYJ03_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00315;old_locus_tag=CYJ03_000315
NZ_PJUP02000001.1	Protein Homology	CDS	70935	71597	.	+	0	ID=cds-WP_104052039.1;Parent=gene-CYJ03_RS00315;Dbxref=GenBank:WP_104052039.1;Name=WP_104052039.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166671.1;locus_tag=CYJ03_RS00315;product=ATP-binding cassette domain-containing protein;protein_id=WP_104052039.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	71755	72633	.	-	.	ID=gene-CYJ03_RS00320;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=CYJ03_RS00320;old_locus_tag=CYJ03_000320
NZ_PJUP02000001.1	Protein Homology	CDS	71755	72633	.	-	0	ID=cds-WP_103863327.1;Parent=gene-CYJ03_RS00320;Dbxref=GenBank:WP_103863327.1;Name=WP_103863327.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CYJ03_RS00320;product=GTP cyclohydrolase FolE2;protein_id=WP_103863327.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	72679	73356	.	-	.	ID=gene-CYJ03_RS00325;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CYJ03_RS00325;old_locus_tag=CYJ03_000325
NZ_PJUP02000001.1	Protein Homology	CDS	72679	73356	.	-	0	ID=cds-WP_103863366.1;Parent=gene-CYJ03_RS00325;Dbxref=GenBank:WP_103863366.1;Name=WP_103863366.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169043.1;locus_tag=CYJ03_RS00325;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_103863366.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	73375	73734	.	-	.	ID=gene-CYJ03_RS00330;Name=CYJ03_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00330;old_locus_tag=CYJ03_000330
NZ_PJUP02000001.1	Protein Homology	CDS	73375	73734	.	-	0	ID=cds-WP_014614727.1;Parent=gene-CYJ03_RS00330;Dbxref=GenBank:WP_014614727.1;Name=WP_014614727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166668.1;locus_tag=CYJ03_RS00330;product=YojF family protein;protein_id=WP_014614727.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	73820	74659	.	-	.	ID=gene-CYJ03_RS00335;Name=CYJ03_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00335;old_locus_tag=CYJ03_000335
NZ_PJUP02000001.1	Protein Homology	CDS	73820	74659	.	-	0	ID=cds-WP_015728631.1;Parent=gene-CYJ03_RS00335;Dbxref=GenBank:WP_015728631.1;Name=WP_015728631.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728631.1;locus_tag=CYJ03_RS00335;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015728631.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	74779	76317	.	+	.	ID=gene-CYJ03_RS00340;Name=CYJ03_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00340;old_locus_tag=CYJ03_000340
NZ_PJUP02000001.1	Protein Homology	CDS	74779	76317	.	+	0	ID=cds-WP_063284852.1;Parent=gene-CYJ03_RS00340;Dbxref=GenBank:WP_063284852.1;Name=WP_063284852.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166666.1;locus_tag=CYJ03_RS00340;product=PTS transporter subunit EIIC;protein_id=WP_063284852.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	76318	76992	.	+	.	ID=gene-CYJ03_RS00345;Name=CYJ03_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00345;old_locus_tag=CYJ03_000345
NZ_PJUP02000001.1	Protein Homology	CDS	76318	76992	.	+	0	ID=cds-WP_015728633.1;Parent=gene-CYJ03_RS00345;Dbxref=GenBank:WP_015728633.1;Name=WP_015728633.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728633.1;locus_tag=CYJ03_RS00345;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_015728633.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	76998	77732	.	+	.	ID=gene-CYJ03_RS00350;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00350;old_locus_tag=CYJ03_000350
NZ_PJUP02000001.1	Protein Homology	CDS	76998	77732	.	+	0	ID=cds-WP_063284854.1;Parent=gene-CYJ03_RS00350;Dbxref=GenBank:WP_063284854.1;Name=WP_063284854.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614723.1;locus_tag=CYJ03_RS00350;product=glucosamine-6-phosphate deaminase;protein_id=WP_063284854.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	77831	78469	.	+	.	ID=gene-CYJ03_RS00355;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00355;old_locus_tag=CYJ03_000355
NZ_PJUP02000001.1	Protein Homology	CDS	77831	78469	.	+	0	ID=cds-WP_014614722.1;Parent=gene-CYJ03_RS00355;Dbxref=GenBank:WP_014614722.1;Name=WP_014614722.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CYJ03_RS00355;product=3-hexulose-6-phosphate synthase;protein_id=WP_014614722.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	78471	79019	.	+	.	ID=gene-CYJ03_RS00360;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00360;old_locus_tag=CYJ03_000360
NZ_PJUP02000001.1	Protein Homology	CDS	78471	79019	.	+	0	ID=cds-WP_100006677.1;Parent=gene-CYJ03_RS00360;Dbxref=GenBank:WP_100006677.1;Name=WP_100006677.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169036.1;locus_tag=CYJ03_RS00360;product=6-phospho-3-hexuloisomerase;protein_id=WP_100006677.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	79317	80000	.	+	.	ID=gene-CYJ03_RS00365;Name=CYJ03_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00365;old_locus_tag=CYJ03_000365
NZ_PJUP02000001.1	Protein Homology	CDS	79317	80000	.	+	0	ID=cds-WP_104052040.1;Parent=gene-CYJ03_RS00365;Dbxref=GenBank:WP_104052040.1;Name=WP_104052040.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219923.1;locus_tag=CYJ03_RS00365;product=flavin reductase family protein;protein_id=WP_104052040.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	80493	80645	.	+	.	ID=gene-CYJ03_RS00370;Name=CYJ03_RS00370;end_range=80645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS00370;old_locus_tag=CYJ03_000370;partial=true;pseudo=true
NZ_PJUP02000001.1	Protein Homology	CDS	80493	80645	.	+	0	ID=cds-CYJ03_RS00370;Parent=gene-CYJ03_RS00370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=80645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ03_RS00370;partial=true;product=2-dehydropantoate 2-reductase N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	81059	82261	.	-	.	ID=gene-CYJ03_RS00380;Name=CYJ03_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00380;old_locus_tag=CYJ03_000380
NZ_PJUP02000001.1	Protein Homology	CDS	81059	82261	.	-	0	ID=cds-WP_063284857.1;Parent=gene-CYJ03_RS00380;Dbxref=GenBank:WP_063284857.1;Name=WP_063284857.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=CYJ03_RS00380;product=MFS transporter;protein_id=WP_063284857.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	82179	82559	.	-	.	ID=gene-CYJ03_RS12755;Name=CYJ03_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12755;old_locus_tag=CYJ03_000385
NZ_PJUP02000001.1	Protein Homology	CDS	82179	82559	.	-	0	ID=cds-WP_104052041.1;Parent=gene-CYJ03_RS12755;Dbxref=GenBank:WP_104052041.1;Name=WP_104052041.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF012936.7;locus_tag=CYJ03_RS12755;product=asparagine synthase-related protein;protein_id=WP_104052041.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	83336	84193	.	+	.	ID=gene-CYJ03_RS00390;Name=CYJ03_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00390;old_locus_tag=CYJ03_000390
NZ_PJUP02000001.1	Protein Homology	CDS	83336	84193	.	+	0	ID=cds-WP_104052042.1;Parent=gene-CYJ03_RS00390;Dbxref=GenBank:WP_104052042.1;Name=WP_104052042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614719.1;locus_tag=CYJ03_RS00390;product=oxidoreductase;protein_id=WP_104052042.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	84410	85096	.	+	.	ID=gene-CYJ03_RS00395;Name=CYJ03_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00395;old_locus_tag=CYJ03_000395
NZ_PJUP02000001.1	Protein Homology	CDS	84410	85096	.	+	0	ID=cds-WP_015728643.1;Parent=gene-CYJ03_RS00395;Dbxref=GenBank:WP_015728643.1;Name=WP_015728643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=CYJ03_RS00395;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_015728643.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	85307	86656	.	+	.	ID=gene-CYJ03_RS00400;Name=CYJ03_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00400;old_locus_tag=CYJ03_000400
NZ_PJUP02000001.1	Protein Homology	CDS	85307	86656	.	+	0	ID=cds-WP_104052043.1;Parent=gene-CYJ03_RS00400;Dbxref=GenBank:WP_104052043.1;Name=WP_104052043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728644.1;locus_tag=CYJ03_RS00400;product=AMP-binding protein;protein_id=WP_104052043.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	86653	87798	.	+	.	ID=gene-CYJ03_RS00405;Name=CYJ03_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00405;old_locus_tag=CYJ03_000405
NZ_PJUP02000001.1	Protein Homology	CDS	86653	87798	.	+	0	ID=cds-WP_014614708.1;Parent=gene-CYJ03_RS00405;Dbxref=GenBank:WP_014614708.1;Name=WP_014614708.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614708.1;locus_tag=CYJ03_RS00405;product=thiolase family protein;protein_id=WP_014614708.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	87767	88138	.	+	.	ID=gene-CYJ03_RS00410;Name=CYJ03_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00410;old_locus_tag=CYJ03_000410
NZ_PJUP02000001.1	Protein Homology	CDS	87767	88138	.	+	0	ID=cds-WP_063284861.1;Parent=gene-CYJ03_RS00410;Dbxref=GenBank:WP_063284861.1;Name=WP_063284861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614707.1;locus_tag=CYJ03_RS00410;product=VraC family protein;protein_id=WP_063284861.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	88138	88395	.	+	.	ID=gene-CYJ03_RS00415;Name=CYJ03_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00415;old_locus_tag=CYJ03_000415
NZ_PJUP02000001.1	Protein Homology	CDS	88138	88395	.	+	0	ID=cds-WP_020219918.1;Parent=gene-CYJ03_RS00415;Dbxref=GenBank:WP_020219918.1;Name=WP_020219918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219918.1;locus_tag=CYJ03_RS00415;product=hypothetical protein;protein_id=WP_020219918.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	88540	89370	.	-	.	ID=gene-CYJ03_RS00420;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ03_RS00420;old_locus_tag=CYJ03_000420
NZ_PJUP02000001.1	Protein Homology	CDS	88540	89370	.	-	0	ID=cds-WP_104052044.1;Parent=gene-CYJ03_RS00420;Dbxref=GenBank:WP_104052044.1;Name=WP_104052044.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CYJ03_RS00420;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_104052044.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	89551	90228	.	+	.	ID=gene-CYJ03_RS00425;Name=CYJ03_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00425;old_locus_tag=CYJ03_000425
NZ_PJUP02000001.1	Protein Homology	CDS	89551	90228	.	+	0	ID=cds-WP_284730715.1;Parent=gene-CYJ03_RS00425;Dbxref=GenBank:WP_284730715.1;Name=WP_284730715.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=CYJ03_RS00425;product=uracil-DNA glycosylase;protein_id=WP_284730715.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	90221	90544	.	+	.	ID=gene-CYJ03_RS00430;Name=CYJ03_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00430;old_locus_tag=CYJ03_000430
NZ_PJUP02000001.1	Protein Homology	CDS	90221	90544	.	+	0	ID=cds-WP_070407643.1;Parent=gene-CYJ03_RS00430;Dbxref=GenBank:WP_070407643.1;Name=WP_070407643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=CYJ03_RS00430;product=DUF5327 family protein;protein_id=WP_070407643.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	90572	90934	.	+	.	ID=gene-CYJ03_RS00435;Name=CYJ03_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00435;old_locus_tag=CYJ03_000435
NZ_PJUP02000001.1	Protein Homology	CDS	90572	90934	.	+	0	ID=cds-WP_104052045.1;Parent=gene-CYJ03_RS00435;Dbxref=GenBank:WP_104052045.1;Name=WP_104052045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=CYJ03_RS00435;product=DUF423 domain-containing protein;protein_id=WP_104052045.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	91616	92926	.	+	.	ID=gene-CYJ03_RS00440;Name=CYJ03_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00440;old_locus_tag=CYJ03_000440
NZ_PJUP02000001.1	Protein Homology	CDS	91616	92926	.	+	0	ID=cds-WP_015728649.1;Parent=gene-CYJ03_RS00440;Dbxref=GenBank:WP_015728649.1;Name=WP_015728649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728649.1;locus_tag=CYJ03_RS00440;product=radical SAM/SPASM domain-containing protein;protein_id=WP_015728649.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	92940	93986	.	+	.	ID=gene-CYJ03_RS00445;Name=CYJ03_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00445;old_locus_tag=CYJ03_000445
NZ_PJUP02000001.1	Protein Homology	CDS	92940	93986	.	+	0	ID=cds-WP_015728650.1;Parent=gene-CYJ03_RS00445;Dbxref=GenBank:WP_015728650.1;Name=WP_015728650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011888511.1;locus_tag=CYJ03_RS00445;product=glutathione S-transferase family protein;protein_id=WP_015728650.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	94027	95154	.	+	.	ID=gene-CYJ03_RS00450;Name=CYJ03_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00450;old_locus_tag=CYJ03_000450
NZ_PJUP02000001.1	Protein Homology	CDS	94027	95154	.	+	0	ID=cds-WP_233510350.1;Parent=gene-CYJ03_RS00450;Dbxref=GenBank:WP_233510350.1;Name=WP_233510350.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ03_RS00450;product=MFS transporter;protein_id=WP_233510350.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	95516	95647	.	+	.	ID=gene-CYJ03_RS12475;Name=CYJ03_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12475;old_locus_tag=CYJ03_000455
NZ_PJUP02000001.1	Protein Homology	CDS	95516	95647	.	+	0	ID=cds-WP_226957574.1;Parent=gene-CYJ03_RS12475;Dbxref=GenBank:WP_226957574.1;Name=WP_226957574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=CYJ03_RS12475;product=SH3 domain-containing protein;protein_id=WP_226957574.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	95900	97351	.	-	.	ID=gene-CYJ03_RS00460;Name=CYJ03_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00460;old_locus_tag=CYJ03_000460
NZ_PJUP02000001.1	Protein Homology	CDS	95900	97351	.	-	0	ID=cds-WP_065520695.1;Parent=gene-CYJ03_RS00460;Dbxref=GenBank:WP_065520695.1;Name=WP_065520695.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166304.1;locus_tag=CYJ03_RS00460;product=APC family permease;protein_id=WP_065520695.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	97583	98146	.	+	.	ID=gene-CYJ03_RS00465;Name=CYJ03_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00465;old_locus_tag=CYJ03_000465
NZ_PJUP02000001.1	Protein Homology	CDS	97583	98146	.	+	0	ID=cds-WP_104052046.1;Parent=gene-CYJ03_RS00465;Dbxref=GenBank:WP_104052046.1;Name=WP_104052046.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728653.1;locus_tag=CYJ03_RS00465;product=GNAT family N-acetyltransferase;protein_id=WP_104052046.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	98380	99549	.	-	.	ID=gene-CYJ03_RS00470;Name=CYJ03_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00470;old_locus_tag=CYJ03_000470
NZ_PJUP02000001.1	Protein Homology	CDS	98380	99549	.	-	0	ID=cds-WP_104052047.1;Parent=gene-CYJ03_RS00470;Dbxref=GenBank:WP_104052047.1;Name=WP_104052047.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166302.1;locus_tag=CYJ03_RS00470;product=DUF418 domain-containing protein;protein_id=WP_104052047.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	99653	100216	.	-	.	ID=gene-CYJ03_RS00475;Name=CYJ03_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00475;old_locus_tag=CYJ03_000475
NZ_PJUP02000001.1	Protein Homology	CDS	99653	100216	.	-	0	ID=cds-WP_104052048.1;Parent=gene-CYJ03_RS00475;Dbxref=GenBank:WP_104052048.1;Name=WP_104052048.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614699.1;locus_tag=CYJ03_RS00475;product=TetR/AcrR family transcriptional regulator;protein_id=WP_104052048.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	100343	100990	.	+	.	ID=gene-CYJ03_RS00480;Name=CYJ03_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00480;old_locus_tag=CYJ03_000480
NZ_PJUP02000001.1	Protein Homology	CDS	100343	100990	.	+	0	ID=cds-WP_104052049.1;Parent=gene-CYJ03_RS00480;Dbxref=GenBank:WP_104052049.1;Name=WP_104052049.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=CYJ03_RS00480;product=HlyD family secretion protein;protein_id=WP_104052049.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	101007	102857	.	+	.	ID=gene-CYJ03_RS00485;Name=CYJ03_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00485;old_locus_tag=CYJ03_000485
NZ_PJUP02000001.1	Protein Homology	CDS	101007	102857	.	+	0	ID=cds-WP_104052050.1;Parent=gene-CYJ03_RS00485;Dbxref=GenBank:WP_104052050.1;Name=WP_104052050.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728656.1;locus_tag=CYJ03_RS00485;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_104052050.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	103786	104106	.	+	.	ID=gene-CYJ03_RS00490;Name=CYJ03_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00490;old_locus_tag=CYJ03_000490
NZ_PJUP02000001.1	Protein Homology	CDS	103786	104106	.	+	0	ID=cds-WP_104052051.1;Parent=gene-CYJ03_RS00490;Dbxref=GenBank:WP_104052051.1;Name=WP_104052051.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614696.1;locus_tag=CYJ03_RS00490;product=ArsR/SmtB family transcription factor;protein_id=WP_104052051.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	104103	105392	.	+	.	ID=gene-CYJ03_RS00495;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00495;old_locus_tag=CYJ03_000495
NZ_PJUP02000001.1	Protein Homology	CDS	104103	105392	.	+	0	ID=cds-WP_101457410.1;Parent=gene-CYJ03_RS00495;Dbxref=GenBank:WP_101457410.1;Name=WP_101457410.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304041.1;locus_tag=CYJ03_RS00495;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_101457410.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	105408	105812	.	+	.	ID=gene-CYJ03_RS00500;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CYJ03_RS00500;old_locus_tag=CYJ03_000500
NZ_PJUP02000001.1	Protein Homology	CDS	105408	105812	.	+	0	ID=cds-WP_101457952.1;Parent=gene-CYJ03_RS00500;Dbxref=GenBank:WP_101457952.1;Name=WP_101457952.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614694.1;locus_tag=CYJ03_RS00500;product=arsenate reductase (thioredoxin);protein_id=WP_101457952.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	106112	106585	.	-	.	ID=gene-CYJ03_RS00505;Name=CYJ03_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00505;old_locus_tag=CYJ03_000505
NZ_PJUP02000001.1	Protein Homology	CDS	106112	106585	.	-	0	ID=cds-WP_014614693.1;Parent=gene-CYJ03_RS00505;Dbxref=GenBank:WP_014614693.1;Name=WP_014614693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614693.1;locus_tag=CYJ03_RS00505;product=hypothetical protein;protein_id=WP_014614693.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	106588	107337	.	-	.	ID=gene-CYJ03_RS00510;Name=CYJ03_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00510;old_locus_tag=CYJ03_000510
NZ_PJUP02000001.1	Protein Homology	CDS	106588	107337	.	-	0	ID=cds-WP_101485255.1;Parent=gene-CYJ03_RS00510;Dbxref=GenBank:WP_101485255.1;Name=WP_101485255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039645025.1;locus_tag=CYJ03_RS00510;product=SAR2788 family putative toxin;protein_id=WP_101485255.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	107340	107690	.	-	.	ID=gene-CYJ03_RS00515;Name=CYJ03_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00515;old_locus_tag=CYJ03_000515
NZ_PJUP02000001.1	Protein Homology	CDS	107340	107690	.	-	0	ID=cds-WP_101485254.1;Parent=gene-CYJ03_RS00515;Dbxref=GenBank:WP_101485254.1;Name=WP_101485254.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.7;locus_tag=CYJ03_RS00515;product=S8 family serine peptidase;protein_id=WP_101485254.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	107934	108131	.	+	.	ID=gene-CYJ03_RS00520;Name=CYJ03_RS00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS00520;old_locus_tag=CYJ03_000520;partial=true;pseudo=true;start_range=.,107934
NZ_PJUP02000001.1	Protein Homology	CDS	107934	108131	.	+	0	ID=cds-CYJ03_RS00520;Parent=gene-CYJ03_RS00520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CYJ03_RS00520;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,107934;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	108285	109121	.	-	.	ID=gene-CYJ03_RS00525;Name=CYJ03_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00525;old_locus_tag=CYJ03_000525
NZ_PJUP02000001.1	Protein Homology	CDS	108285	109121	.	-	0	ID=cds-WP_014614689.1;Parent=gene-CYJ03_RS00525;Dbxref=GenBank:WP_014614689.1;Name=WP_014614689.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=CYJ03_RS00525;product=lipoate--protein ligase family protein;protein_id=WP_014614689.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	109121	110110	.	-	.	ID=gene-CYJ03_RS00530;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CYJ03_RS00530;old_locus_tag=CYJ03_000530
NZ_PJUP02000001.1	Protein Homology	CDS	109121	110110	.	-	0	ID=cds-WP_037543877.1;Parent=gene-CYJ03_RS00530;Dbxref=GenBank:WP_037543877.1;Name=WP_037543877.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=CYJ03_RS00530;product=phosphate acetyltransferase;protein_id=WP_037543877.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	110278	111033	.	+	.	ID=gene-CYJ03_RS00535;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS00535;old_locus_tag=CYJ03_000535
NZ_PJUP02000001.1	Protein Homology	CDS	110278	111033	.	+	0	ID=cds-WP_014614687.1;Parent=gene-CYJ03_RS00535;Dbxref=GenBank:WP_014614687.1;Name=WP_014614687.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614687.1;locus_tag=CYJ03_RS00535;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_014614687.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	111241	111579	.	-	.	ID=gene-CYJ03_RS00540;Name=CYJ03_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00540;old_locus_tag=CYJ03_000540
NZ_PJUP02000001.1	Protein Homology	CDS	111241	111579	.	-	0	ID=cds-WP_015728663.1;Parent=gene-CYJ03_RS00540;Dbxref=GenBank:WP_015728663.1;Name=WP_015728663.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614686.1;locus_tag=CYJ03_RS00540;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_015728663.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	111576	111845	.	-	.	ID=gene-CYJ03_RS00545;Name=CYJ03_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00545;old_locus_tag=CYJ03_000545
NZ_PJUP02000001.1	Protein Homology	CDS	111576	111845	.	-	0	ID=cds-WP_063284869.1;Parent=gene-CYJ03_RS00545;Dbxref=GenBank:WP_063284869.1;Name=WP_063284869.1;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477818.1;locus_tag=CYJ03_RS00545;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_063284869.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	112086	112841	.	+	.	ID=gene-CYJ03_RS00550;Name=CYJ03_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00550;old_locus_tag=CYJ03_000550
NZ_PJUP02000001.1	Protein Homology	CDS	112086	112841	.	+	0	ID=cds-WP_014614684.1;Parent=gene-CYJ03_RS00550;Dbxref=GenBank:WP_014614684.1;Name=WP_014614684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614684.1;locus_tag=CYJ03_RS00550;product=threonine/serine exporter family protein;protein_id=WP_014614684.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	112854	113315	.	+	.	ID=gene-CYJ03_RS00555;Name=CYJ03_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00555;old_locus_tag=CYJ03_000555
NZ_PJUP02000001.1	Protein Homology	CDS	112854	113315	.	+	0	ID=cds-WP_014614683.1;Parent=gene-CYJ03_RS00555;Dbxref=GenBank:WP_014614683.1;Name=WP_014614683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166289.1;locus_tag=CYJ03_RS00555;product=threonine/serine exporter family protein;protein_id=WP_014614683.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	113895	115436	.	+	.	ID=gene-CYJ03_RS00560;Name=CYJ03_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00560;old_locus_tag=CYJ03_000560
NZ_PJUP02000001.1	Protein Homology	CDS	113895	115436	.	+	0	ID=cds-WP_101458333.1;Parent=gene-CYJ03_RS00560;Dbxref=GenBank:WP_101458333.1;Name=WP_101458333.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166288.1;locus_tag=CYJ03_RS00560;product=SLC13 family permease;protein_id=WP_101458333.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	115589	115921	.	+	.	ID=gene-CYJ03_RS00565;Name=CYJ03_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00565;old_locus_tag=CYJ03_000565
NZ_PJUP02000001.1	Protein Homology	CDS	115589	115921	.	+	0	ID=cds-WP_096548189.1;Parent=gene-CYJ03_RS00565;Dbxref=GenBank:WP_096548189.1;Name=WP_096548189.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614681.1;locus_tag=CYJ03_RS00565;product=PadR family transcriptional regulator;protein_id=WP_096548189.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	115905	116510	.	+	.	ID=gene-CYJ03_RS00570;Name=CYJ03_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00570;old_locus_tag=CYJ03_000570
NZ_PJUP02000001.1	Protein Homology	CDS	115905	116510	.	+	0	ID=cds-WP_014614680.1;Parent=gene-CYJ03_RS00570;Dbxref=GenBank:WP_014614680.1;Name=WP_014614680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728666.1;locus_tag=CYJ03_RS00570;product=DUF2812 domain-containing protein;protein_id=WP_014614680.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	117126	118412	.	+	.	ID=gene-CYJ03_RS00575;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00575;old_locus_tag=CYJ03_000575
NZ_PJUP02000001.1	Protein Homology	CDS	117126	118412	.	+	0	ID=cds-WP_020219999.1;Parent=gene-CYJ03_RS00575;Dbxref=GenBank:WP_020219999.1;Name=WP_020219999.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS00575;product=group II intron reverse transcriptase/maturase;protein_id=WP_020219999.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	118574	119797	.	-	.	ID=gene-CYJ03_RS00580;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CYJ03_RS00580;old_locus_tag=CYJ03_000580
NZ_PJUP02000001.1	Protein Homology	CDS	118574	119797	.	-	0	ID=cds-WP_015728755.1;Parent=gene-CYJ03_RS00580;Dbxref=GenBank:WP_015728755.1;Name=WP_015728755.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166127.1;locus_tag=CYJ03_RS00580;product=peptidase T;protein_id=WP_015728755.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	119821	120324	.	-	.	ID=gene-CYJ03_RS00585;Name=CYJ03_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00585;old_locus_tag=CYJ03_000585
NZ_PJUP02000001.1	Protein Homology	CDS	119821	120324	.	-	0	ID=cds-WP_014614514.1;Parent=gene-CYJ03_RS00585;Dbxref=GenBank:WP_014614514.1;Name=WP_014614514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=CYJ03_RS00585;product=threonine/serine exporter family protein;protein_id=WP_014614514.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	120340	121101	.	-	.	ID=gene-CYJ03_RS00590;Name=CYJ03_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00590;old_locus_tag=CYJ03_000590
NZ_PJUP02000001.1	Protein Homology	CDS	120340	121101	.	-	0	ID=cds-WP_014614513.1;Parent=gene-CYJ03_RS00590;Dbxref=GenBank:WP_014614513.1;Name=WP_014614513.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=CYJ03_RS00590;product=threonine/serine exporter family protein;protein_id=WP_014614513.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	121595	122665	.	-	.	ID=gene-CYJ03_RS00595;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=CYJ03_RS00595;old_locus_tag=CYJ03_000595
NZ_PJUP02000001.1	Protein Homology	CDS	121595	122665	.	-	0	ID=cds-WP_014614512.1;Parent=gene-CYJ03_RS00595;Dbxref=GenBank:WP_014614512.1;Name=WP_014614512.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614512.1;locus_tag=CYJ03_RS00595;product=GGDEF domain-containing protein GdpS;protein_id=WP_014614512.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	123095	124153	.	+	.	ID=gene-CYJ03_RS00600;Name=CYJ03_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00600;old_locus_tag=CYJ03_000600
NZ_PJUP02000001.1	Protein Homology	CDS	123095	124153	.	+	0	ID=cds-WP_014614511.1;Parent=gene-CYJ03_RS00600;Dbxref=GenBank:WP_014614511.1;Name=WP_014614511.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614511.1;locus_tag=CYJ03_RS00600;product=glycosyltransferase family 4 protein;protein_id=WP_014614511.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	124310	124945	.	-	.	ID=gene-CYJ03_RS00605;Name=CYJ03_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00605;old_locus_tag=CYJ03_000605
NZ_PJUP02000001.1	Protein Homology	CDS	124310	124945	.	-	0	ID=cds-WP_014614510.1;Parent=gene-CYJ03_RS00605;Dbxref=GenBank:WP_014614510.1;Name=WP_014614510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424513.1;locus_tag=CYJ03_RS00605;product=YigZ family protein;protein_id=WP_014614510.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	125243	126127	.	+	.	ID=gene-CYJ03_RS00610;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=CYJ03_RS00610;old_locus_tag=CYJ03_000610
NZ_PJUP02000001.1	Protein Homology	CDS	125243	126127	.	+	0	ID=cds-WP_041614914.1;Parent=gene-CYJ03_RS00610;Dbxref=GenBank:WP_041614914.1;Name=WP_041614914.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=CYJ03_RS00610;product=fatty acid kinase binding subunit FakB1;protein_id=WP_041614914.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	126282	127568	.	+	.	ID=gene-CYJ03_RS00615;Name=CYJ03_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00615;old_locus_tag=CYJ03_000615
NZ_PJUP02000001.1	Protein Homology	CDS	126282	127568	.	+	0	ID=cds-WP_015728758.1;Parent=gene-CYJ03_RS00615;Dbxref=GenBank:WP_015728758.1;Name=WP_015728758.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166120.1;locus_tag=CYJ03_RS00615;product=DEAD/DEAH box helicase family protein;protein_id=WP_015728758.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	127817	128233	.	+	.	ID=gene-CYJ03_RS12480;Name=CYJ03_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12480
NZ_PJUP02000001.1	GeneMarkS-2+	CDS	127817	128233	.	+	0	ID=cds-WP_225549922.1;Parent=gene-CYJ03_RS12480;Dbxref=GenBank:WP_225549922.1;Name=WP_225549922.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12480;product=ComF family protein;protein_id=WP_225549922.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	128298	128858	.	+	.	ID=gene-CYJ03_RS00625;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CYJ03_RS00625;old_locus_tag=CYJ03_000625
NZ_PJUP02000001.1	Protein Homology	CDS	128298	128858	.	+	0	ID=cds-WP_014614506.1;Parent=gene-CYJ03_RS00625;Dbxref=GenBank:WP_014614506.1;Name=WP_014614506.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424517.1;locus_tag=CYJ03_RS00625;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_014614506.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	129281	131809	.	+	.	ID=gene-CYJ03_RS00630;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00630;old_locus_tag=CYJ03_000630
NZ_PJUP02000001.1	Protein Homology	CDS	129281	131809	.	+	0	ID=cds-WP_014614505.1;Parent=gene-CYJ03_RS00630;Dbxref=GenBank:WP_014614505.1;Name=WP_014614505.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168505.1;locus_tag=CYJ03_RS00630;product=preprotein translocase subunit SecA;protein_id=WP_014614505.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	131849	132953	.	+	.	ID=gene-CYJ03_RS00635;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00635;old_locus_tag=CYJ03_000635
NZ_PJUP02000001.1	Protein Homology	CDS	131849	131920	.	+	0	ID=cds-WP_096533149.1;Parent=gene-CYJ03_RS00635;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ03_RS00635;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11
NZ_PJUP02000001.1	Protein Homology	CDS	131922	132953	.	+	0	ID=cds-WP_096533149.1;Parent=gene-CYJ03_RS00635;Dbxref=GenBank:WP_096533149.1;Name=WP_096533149.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=CYJ03_RS00635;product=peptide chain release factor 2;protein_id=WP_096533149.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	133161	133802	.	+	.	ID=gene-CYJ03_RS00640;Name=CYJ03_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00640;old_locus_tag=CYJ03_000640
NZ_PJUP02000001.1	Protein Homology	CDS	133161	133802	.	+	0	ID=cds-WP_104052052.1;Parent=gene-CYJ03_RS00640;Dbxref=GenBank:WP_104052052.1;Name=WP_104052052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=CYJ03_RS00640;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_104052052.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	133808	134053	.	+	.	ID=gene-CYJ03_RS00645;Name=CYJ03_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00645;old_locus_tag=CYJ03_000645
NZ_PJUP02000001.1	Protein Homology	CDS	133808	134053	.	+	0	ID=cds-WP_031253646.1;Parent=gene-CYJ03_RS00645;Dbxref=GenBank:WP_031253646.1;Name=WP_031253646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=CYJ03_RS00645;product=CsbA family protein;protein_id=WP_031253646.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	134223	136205	.	+	.	ID=gene-CYJ03_RS00650;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00650;old_locus_tag=CYJ03_000650
NZ_PJUP02000001.1	Protein Homology	CDS	134223	136205	.	+	0	ID=cds-WP_014614501.1;Parent=gene-CYJ03_RS00650;Dbxref=GenBank:WP_014614501.1;Name=WP_014614501.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=CYJ03_RS00650;product=excinuclease ABC subunit UvrB;protein_id=WP_014614501.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	136211	139054	.	+	.	ID=gene-CYJ03_RS00655;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00655;old_locus_tag=CYJ03_000655
NZ_PJUP02000001.1	Protein Homology	CDS	136211	139054	.	+	0	ID=cds-WP_014614500.1;Parent=gene-CYJ03_RS00655;Dbxref=GenBank:WP_014614500.1;Name=WP_014614500.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168500.1;locus_tag=CYJ03_RS00655;product=excinuclease ABC subunit UvrA;protein_id=WP_014614500.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	139058	139408	.	+	.	ID=gene-CYJ03_RS00660;Name=CYJ03_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00660;old_locus_tag=CYJ03_000660
NZ_PJUP02000001.1	Protein Homology	CDS	139058	139408	.	+	0	ID=cds-WP_014614499.1;Parent=gene-CYJ03_RS00660;Dbxref=GenBank:WP_014614499.1;Name=WP_014614499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166115.1;locus_tag=CYJ03_RS00660;product=SHOCT-like domain-containing protein;protein_id=WP_014614499.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	139918	140859	.	+	.	ID=gene-CYJ03_RS00665;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=CYJ03_RS00665;old_locus_tag=CYJ03_000665
NZ_PJUP02000001.1	Protein Homology	CDS	139918	140859	.	+	0	ID=cds-WP_014614498.1;Parent=gene-CYJ03_RS00665;Dbxref=GenBank:WP_014614498.1;Name=WP_014614498.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614498.1;locus_tag=CYJ03_RS00665;product=HPr(Ser) kinase/phosphatase;protein_id=WP_014614498.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	140859	141695	.	+	.	ID=gene-CYJ03_RS00670;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CYJ03_RS00670;old_locus_tag=CYJ03_000670
NZ_PJUP02000001.1	Protein Homology	CDS	140859	141695	.	+	0	ID=cds-WP_014614497.1;Parent=gene-CYJ03_RS00670;Dbxref=GenBank:WP_014614497.1;Name=WP_014614497.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168497.1;locus_tag=CYJ03_RS00670;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014614497.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	pseudogene	141865	142167	.	+	.	ID=gene-CYJ03_RS12760;Name=CYJ03_RS12760;end_range=142167,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12760;partial=true;pseudo=true
NZ_PJUP02000001.1	Protein Homology	CDS	141865	142167	.	+	0	ID=cds-CYJ03_RS12760;Parent=gene-CYJ03_RS12760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046677,GO:0016746,GO:0120225;end_range=142167,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=CYJ03_RS12760;partial=true;product=acyltransferase;pseudo=true;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	142202	143641	.	+	.	ID=gene-CYJ03_RS00680;Name=CYJ03_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00680;old_locus_tag=CYJ03_000680
NZ_PJUP02000001.1	Protein Homology	CDS	142202	143641	.	+	0	ID=cds-WP_104052053.1;Parent=gene-CYJ03_RS00680;Dbxref=GenBank:WP_104052053.1;Name=WP_104052053.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=CYJ03_RS00680;product=tetratricopeptide repeat protein;protein_id=WP_104052053.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	143704	144636	.	+	.	ID=gene-CYJ03_RS00685;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00685;old_locus_tag=CYJ03_000685
NZ_PJUP02000001.1	Protein Homology	CDS	143704	144636	.	+	0	ID=cds-WP_014614494.1;Parent=gene-CYJ03_RS00685;Dbxref=GenBank:WP_014614494.1;Name=WP_014614494.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614494.1;locus_tag=CYJ03_RS00685;product=thioredoxin-disulfide reductase;protein_id=WP_014614494.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	145241	146149	.	+	.	ID=gene-CYJ03_RS00690;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS00690;old_locus_tag=CYJ03_000690
NZ_PJUP02000001.1	Protein Homology	CDS	145241	146149	.	+	0	ID=cds-WP_014614493.1;Parent=gene-CYJ03_RS00690;Dbxref=GenBank:WP_014614493.1;Name=WP_014614493.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219570.1;locus_tag=CYJ03_RS00690;product=RNase adapter RapZ;protein_id=WP_014614493.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	146151	147146	.	+	.	ID=gene-CYJ03_RS00695;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;gene_synonym=yvcK;locus_tag=CYJ03_RS00695;old_locus_tag=CYJ03_000695
NZ_PJUP02000001.1	Protein Homology	CDS	146151	147146	.	+	0	ID=cds-WP_015728762.1;Parent=gene-CYJ03_RS00695;Dbxref=GenBank:WP_015728762.1;Name=WP_015728762.1;Ontology_term=GO:0008360,GO:0043743;gbkey=CDS;gene=mgfK;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=CYJ03_RS00695;product=gluconeogenesis morphogenetic factor MgfK;protein_id=WP_015728762.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	147193	148137	.	+	.	ID=gene-CYJ03_RS00700;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00700;old_locus_tag=CYJ03_000700
NZ_PJUP02000001.1	Protein Homology	CDS	147193	148137	.	+	0	ID=cds-WP_014614491.1;Parent=gene-CYJ03_RS00700;Dbxref=GenBank:WP_014614491.1;Name=WP_014614491.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=CYJ03_RS00700;product=DNA-binding protein WhiA;protein_id=WP_014614491.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	149046	149117	.	-	.	ID=gene-CYJ03_RS00710;Name=CYJ03_RS00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS00710;old_locus_tag=CYJ03_000710
NZ_PJUP02000001.1	tRNAscan-SE	tRNA	149046	149117	.	-	.	ID=rna-CYJ03_RS00710;Parent=gene-CYJ03_RS00710;anticodon=(pos:complement(149082..149084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS00710;product=tRNA-Arg
NZ_PJUP02000001.1	tRNAscan-SE	exon	149046	149117	.	-	.	ID=exon-CYJ03_RS00710-1;Parent=rna-CYJ03_RS00710;anticodon=(pos:complement(149082..149084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS00710;product=tRNA-Arg
NZ_PJUP02000001.1	RefSeq	gene	149242	149856	.	+	.	ID=gene-CYJ03_RS00715;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CYJ03_RS00715;old_locus_tag=CYJ03_000715
NZ_PJUP02000001.1	Protein Homology	CDS	149242	149856	.	+	0	ID=cds-WP_256726599.1;Parent=gene-CYJ03_RS00715;Dbxref=GenBank:WP_256726599.1;Name=WP_256726599.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614489.1;locus_tag=CYJ03_RS00715;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_256726599.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	149953	150450	.	+	.	ID=gene-CYJ03_RS00720;Name=CYJ03_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00720;old_locus_tag=CYJ03_000720
NZ_PJUP02000001.1	Protein Homology	CDS	149953	150450	.	+	0	ID=cds-WP_014614488.1;Parent=gene-CYJ03_RS00720;Dbxref=GenBank:WP_014614488.1;Name=WP_014614488.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165690.1;locus_tag=CYJ03_RS00720;product=GNAT family N-acetyltransferase;protein_id=WP_014614488.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	151054	151956	.	-	.	ID=gene-CYJ03_RS00725;Name=CYJ03_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00725;old_locus_tag=CYJ03_000725
NZ_PJUP02000001.1	Protein Homology	CDS	151054	151956	.	-	0	ID=cds-WP_014614487.1;Parent=gene-CYJ03_RS00725;Dbxref=GenBank:WP_014614487.1;Name=WP_014614487.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816312.1;locus_tag=CYJ03_RS00725;product=TIGR01777 family oxidoreductase;protein_id=WP_014614487.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	152767	153438	.	+	.	ID=gene-CYJ03_RS00730;Name=CYJ03_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00730;old_locus_tag=CYJ03_000730
NZ_PJUP02000001.1	Protein Homology	CDS	152767	153438	.	+	0	ID=cds-WP_100006793.1;Parent=gene-CYJ03_RS00730;Dbxref=GenBank:WP_100006793.1;Name=WP_100006793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614485.1;locus_tag=CYJ03_RS00730;product=DUF4887 domain-containing protein;protein_id=WP_100006793.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	153537	153767	.	-	.	ID=gene-CYJ03_RS00735;Name=CYJ03_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00735;old_locus_tag=CYJ03_000735
NZ_PJUP02000001.1	Protein Homology	CDS	153537	153767	.	-	0	ID=cds-WP_081248047.1;Parent=gene-CYJ03_RS00735;Dbxref=GenBank:WP_081248047.1;Name=WP_081248047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168483.1;locus_tag=CYJ03_RS00735;product=hypothetical protein;protein_id=WP_081248047.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	154065	155102	.	+	.	ID=gene-CYJ03_RS00740;Name=CYJ03_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00740;old_locus_tag=CYJ03_000740
NZ_PJUP02000001.1	Protein Homology	CDS	154065	155102	.	+	0	ID=cds-WP_104052054.1;Parent=gene-CYJ03_RS00740;Dbxref=GenBank:WP_104052054.1;Name=WP_104052054.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614484.1;locus_tag=CYJ03_RS00740;product=sugar-binding transcriptional regulator;protein_id=WP_104052054.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	155165	156172	.	+	.	ID=gene-CYJ03_RS00745;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CYJ03_RS00745;old_locus_tag=CYJ03_000745
NZ_PJUP02000001.1	Protein Homology	CDS	155165	156172	.	+	0	ID=cds-WP_063284480.1;Parent=gene-CYJ03_RS00745;Dbxref=GenBank:WP_063284480.1;Name=WP_063284480.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=CYJ03_RS00745;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_063284480.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	156304	157494	.	+	.	ID=gene-CYJ03_RS00750;Name=CYJ03_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00750;old_locus_tag=CYJ03_000750
NZ_PJUP02000001.1	Protein Homology	CDS	156304	157494	.	+	0	ID=cds-WP_014614482.1;Parent=gene-CYJ03_RS00750;Dbxref=GenBank:WP_014614482.1;Name=WP_014614482.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614482.1;locus_tag=CYJ03_RS00750;product=phosphoglycerate kinase;protein_id=WP_014614482.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	157540	158301	.	+	.	ID=gene-CYJ03_RS00755;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00755;old_locus_tag=CYJ03_000755
NZ_PJUP02000001.1	Protein Homology	CDS	157540	158301	.	+	0	ID=cds-WP_014614481.1;Parent=gene-CYJ03_RS00755;Dbxref=GenBank:WP_014614481.1;Name=WP_014614481.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=CYJ03_RS00755;product=triose-phosphate isomerase;protein_id=WP_014614481.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	158304	159821	.	+	.	ID=gene-CYJ03_RS00760;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=CYJ03_RS00760;old_locus_tag=CYJ03_000760
NZ_PJUP02000001.1	Protein Homology	CDS	158304	159821	.	+	0	ID=cds-WP_014614480.1;Parent=gene-CYJ03_RS00760;Dbxref=GenBank:WP_014614480.1;Name=WP_014614480.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CYJ03_RS00760;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_014614480.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	159949	161253	.	+	.	ID=gene-CYJ03_RS00765;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CYJ03_RS00765;old_locus_tag=CYJ03_000765
NZ_PJUP02000001.1	Protein Homology	CDS	159949	161253	.	+	0	ID=cds-WP_014614479.1;Parent=gene-CYJ03_RS00765;Dbxref=GenBank:WP_014614479.1;Name=WP_014614479.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CYJ03_RS00765;product=surface-displayed alpha-enolase;protein_id=WP_014614479.1;transl_table=11
NZ_PJUP02000001.1	RefSeq	gene	161308	161439	.	+	.	ID=gene-CYJ03_RS00770;Name=CYJ03_RS00770;end_range=161439,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS00770;old_locus_tag=CYJ03_000770;partial=true
NZ_PJUP02000001.1	cmsearch	rRNA	161308	161439	.	+	.	ID=rna-CYJ03_RS00770;Parent=gene-CYJ03_RS00770;Dbxref=RFAM:RF00177;end_range=161439,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS00770;partial=true;product=16S ribosomal RNA
NZ_PJUP02000001.1	cmsearch	exon	161308	161439	.	+	.	ID=exon-CYJ03_RS00770-1;Parent=rna-CYJ03_RS00770;Dbxref=RFAM:RF00177;end_range=161439,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS00770;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUP02000024.1 1 40703
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000024.1	RefSeq	region	1	40703	.	+	.	ID=NZ_PJUP02000024.1:1..40703;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000024.1	RefSeq	pseudogene	66	263	.	-	.	ID=gene-CYJ03_RS08895;Name=CYJ03_RS08895;end_range=263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS08895;old_locus_tag=CYJ03_008885;partial=true;pseudo=true;start_range=.,66
NZ_PJUP02000024.1	Protein Homology	CDS	66	263	.	-	0	ID=cds-CYJ03_RS08895;Parent=gene-CYJ03_RS08895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CYJ03_RS08895;partial=true;product=U32 family peptidase;pseudo=true;start_range=.,66;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	440	772	.	-	.	ID=gene-CYJ03_RS08900;Name=CYJ03_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08900;old_locus_tag=CYJ03_008890
NZ_PJUP02000024.1	GeneMarkS-2+	CDS	440	772	.	-	0	ID=cds-WP_373408327.1;Parent=gene-CYJ03_RS08900;Dbxref=GenBank:WP_373408327.1;Name=WP_373408327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS08900;product=hypothetical protein;protein_id=WP_373408327.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	876	1604	.	-	.	ID=gene-CYJ03_RS08905;Name=CYJ03_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08905;old_locus_tag=CYJ03_008895
NZ_PJUP02000024.1	Protein Homology	CDS	876	1604	.	-	0	ID=cds-WP_014612925.1;Parent=gene-CYJ03_RS08905;Dbxref=GenBank:WP_014612925.1;Name=WP_014612925.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612925.1;locus_tag=CYJ03_RS08905;product=epoxyqueuosine reductase QueH;protein_id=WP_014612925.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	1791	2420	.	-	.	ID=gene-CYJ03_RS08910;Name=CYJ03_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08910;old_locus_tag=CYJ03_008900
NZ_PJUP02000024.1	Protein Homology	CDS	1791	2420	.	-	0	ID=cds-WP_065353999.1;Parent=gene-CYJ03_RS08910;Dbxref=GenBank:WP_065353999.1;Name=WP_065353999.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219449.1;locus_tag=CYJ03_RS08910;product=class I SAM-dependent methyltransferase;protein_id=WP_065353999.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	2806	5640	.	-	.	ID=gene-CYJ03_RS08915;Name=CYJ03_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08915;old_locus_tag=CYJ03_008905
NZ_PJUP02000024.1	Protein Homology	CDS	2806	5640	.	-	0	ID=cds-WP_015729664.1;Parent=gene-CYJ03_RS08915;Dbxref=GenBank:WP_015729664.1;Name=WP_015729664.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167306.1;locus_tag=CYJ03_RS08915;product=YhgE/Pip domain-containing protein;protein_id=WP_015729664.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	5968	8043	.	+	.	ID=gene-CYJ03_RS08920;Name=CYJ03_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08920;old_locus_tag=CYJ03_008910
NZ_PJUP02000024.1	Protein Homology	CDS	5968	8043	.	+	0	ID=cds-WP_104052308.1;Parent=gene-CYJ03_RS08920;Dbxref=GenBank:WP_104052308.1;Name=WP_104052308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729665.1;locus_tag=CYJ03_RS08920;product=amidase domain-containing protein;protein_id=WP_104052308.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	8642	10495	.	-	.	ID=gene-CYJ03_RS08925;Name=spsA;gbkey=Gene;gene=spsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08925;old_locus_tag=CYJ03_008915
NZ_PJUP02000024.1	Protein Homology	CDS	8642	10495	.	-	0	ID=cds-WP_104052309.1;Parent=gene-CYJ03_RS08925;Dbxref=GenBank:WP_104052309.1;Name=WP_104052309.1;gbkey=CDS;gene=spsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612921.1;locus_tag=CYJ03_RS08925;product=LPXTG-anchored surface protein SpsA;protein_id=WP_104052309.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	10632	12554	.	-	.	ID=gene-CYJ03_RS08930;Name=CYJ03_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08930;old_locus_tag=CYJ03_008920
NZ_PJUP02000024.1	Protein Homology	CDS	10632	12554	.	-	0	ID=cds-WP_101457159.1;Parent=gene-CYJ03_RS08930;Dbxref=GenBank:WP_101457159.1;Name=WP_101457159.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166501.1;locus_tag=CYJ03_RS08930;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_101457159.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	12741	13466	.	-	.	ID=gene-CYJ03_RS08935;Name=CYJ03_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08935;old_locus_tag=CYJ03_008925
NZ_PJUP02000024.1	Protein Homology	CDS	12741	13466	.	-	0	ID=cds-WP_104052310.1;Parent=gene-CYJ03_RS08935;Dbxref=GenBank:WP_104052310.1;Name=WP_104052310.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729668.1;locus_tag=CYJ03_RS08935;product=MerR family transcriptional regulator;protein_id=WP_104052310.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	13496	14461	.	-	.	ID=gene-CYJ03_RS08940;Name=CYJ03_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08940;old_locus_tag=CYJ03_008930
NZ_PJUP02000024.1	Protein Homology	CDS	13496	14461	.	-	0	ID=cds-WP_101458111.1;Parent=gene-CYJ03_RS08940;Dbxref=GenBank:WP_101458111.1;Name=WP_101458111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=CYJ03_RS08940;product=alpha/beta fold hydrolase;protein_id=WP_101458111.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	15086	15415	.	-	.	ID=gene-CYJ03_RS08945;Name=CYJ03_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08945;old_locus_tag=CYJ03_008935
NZ_PJUP02000024.1	Protein Homology	CDS	15086	15415	.	-	0	ID=cds-WP_104052311.1;Parent=gene-CYJ03_RS08945;Dbxref=GenBank:WP_104052311.1;Name=WP_104052311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612916.1;locus_tag=CYJ03_RS08945;product=antibiotic biosynthesis monooxygenase;protein_id=WP_104052311.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	16219	16674	.	+	.	ID=gene-CYJ03_RS08955;Name=CYJ03_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08955;old_locus_tag=CYJ03_008945
NZ_PJUP02000024.1	Protein Homology	CDS	16219	16674	.	+	0	ID=cds-WP_096536259.1;Parent=gene-CYJ03_RS08955;Dbxref=GenBank:WP_096536259.1;Name=WP_096536259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086052.1;locus_tag=CYJ03_RS08955;product=DUF6978 family protein;protein_id=WP_096536259.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	16688	17476	.	+	.	ID=gene-CYJ03_RS08960;Name=CYJ03_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08960;old_locus_tag=CYJ03_008950
NZ_PJUP02000024.1	Protein Homology	CDS	16688	17476	.	+	0	ID=cds-WP_104052312.1;Parent=gene-CYJ03_RS08960;Dbxref=GenBank:WP_104052312.1;Name=WP_104052312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500456.1;locus_tag=CYJ03_RS08960;product=DUF1829 domain-containing protein;protein_id=WP_104052312.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	17849	19237	.	-	.	ID=gene-CYJ03_RS08965;Name=CYJ03_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08965;old_locus_tag=CYJ03_008955
NZ_PJUP02000024.1	Protein Homology	CDS	17849	19237	.	-	0	ID=cds-WP_070407766.1;Parent=gene-CYJ03_RS08965;Dbxref=GenBank:WP_070407766.1;Name=WP_070407766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=CYJ03_RS08965;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_070407766.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	19390	19740	.	+	.	ID=gene-CYJ03_RS08970;Name=CYJ03_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08970;old_locus_tag=CYJ03_008960
NZ_PJUP02000024.1	Protein Homology	CDS	19390	19740	.	+	0	ID=cds-WP_015729673.1;Parent=gene-CYJ03_RS08970;Dbxref=GenBank:WP_015729673.1;Name=WP_015729673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729673.1;locus_tag=CYJ03_RS08970;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_015729673.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	19807	20166	.	-	.	ID=gene-CYJ03_RS08975;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=CYJ03_RS08975;old_locus_tag=CYJ03_008965
NZ_PJUP02000024.1	Protein Homology	CDS	19807	20166	.	-	0	ID=cds-WP_014612912.1;Parent=gene-CYJ03_RS08975;Dbxref=GenBank:WP_014612912.1;Name=WP_014612912.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124171.1;locus_tag=CYJ03_RS08975;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_014612912.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	20163	20744	.	-	.	ID=gene-CYJ03_RS08980;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CYJ03_RS08980;old_locus_tag=CYJ03_008970
NZ_PJUP02000024.1	Protein Homology	CDS	20163	20744	.	-	0	ID=cds-WP_070407818.1;Parent=gene-CYJ03_RS08980;Dbxref=GenBank:WP_070407818.1;Name=WP_070407818.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166492.1;locus_tag=CYJ03_RS08980;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_070407818.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	20767	21729	.	-	.	ID=gene-CYJ03_RS08985;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=CYJ03_RS08985;old_locus_tag=CYJ03_008975
NZ_PJUP02000024.1	Protein Homology	CDS	20767	21729	.	-	0	ID=cds-WP_014612910.1;Parent=gene-CYJ03_RS08985;Dbxref=GenBank:WP_014612910.1;Name=WP_014612910.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=CYJ03_RS08985;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_014612910.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	21896	22597	.	-	.	ID=gene-CYJ03_RS08990;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08990;old_locus_tag=CYJ03_008980
NZ_PJUP02000024.1	Protein Homology	CDS	21896	22597	.	-	0	ID=cds-WP_014612909.1;Parent=gene-CYJ03_RS08990;Dbxref=GenBank:WP_014612909.1;Name=WP_014612909.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498828.1;locus_tag=CYJ03_RS08990;product=antiholin-like protein LrgB;protein_id=WP_014612909.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	22590	23024	.	-	.	ID=gene-CYJ03_RS08995;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08995;old_locus_tag=CYJ03_008985
NZ_PJUP02000024.1	Protein Homology	CDS	22590	23024	.	-	0	ID=cds-WP_014612908.1;Parent=gene-CYJ03_RS08995;Dbxref=GenBank:WP_014612908.1;Name=WP_014612908.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612908.1;locus_tag=CYJ03_RS08995;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_014612908.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	23672	24406	.	-	.	ID=gene-CYJ03_RS09000;Name=CYJ03_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09000;old_locus_tag=CYJ03_008990
NZ_PJUP02000024.1	Protein Homology	CDS	23672	24406	.	-	0	ID=cds-WP_096533817.1;Parent=gene-CYJ03_RS09000;Dbxref=GenBank:WP_096533817.1;Name=WP_096533817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612907.1;locus_tag=CYJ03_RS09000;product=response regulator transcription factor LytR;protein_id=WP_096533817.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	24410	26161	.	-	.	ID=gene-CYJ03_RS09005;Name=CYJ03_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09005;old_locus_tag=CYJ03_008995
NZ_PJUP02000024.1	Protein Homology	CDS	24410	26161	.	-	0	ID=cds-WP_104052313.1;Parent=gene-CYJ03_RS09005;Dbxref=GenBank:WP_104052313.1;Name=WP_104052313.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166488.1;locus_tag=CYJ03_RS09005;product=sensor histidine kinase;protein_id=WP_104052313.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	26636	27814	.	-	.	ID=gene-CYJ03_RS09010;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09010;old_locus_tag=CYJ03_009000
NZ_PJUP02000024.1	Protein Homology	CDS	26636	27814	.	-	0	ID=cds-WP_014612904.1;Parent=gene-CYJ03_RS09010;Dbxref=GenBank:WP_014612904.1;Name=WP_014612904.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=CYJ03_RS09010;product=phosphopentomutase;protein_id=WP_014612904.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	27848	28510	.	-	.	ID=gene-CYJ03_RS09015;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09015;old_locus_tag=CYJ03_009005
NZ_PJUP02000024.1	Protein Homology	CDS	27848	28510	.	-	0	ID=cds-WP_101458108.1;Parent=gene-CYJ03_RS09015;Dbxref=GenBank:WP_101458108.1;Name=WP_101458108.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=CYJ03_RS09015;product=deoxyribose-phosphate aldolase;protein_id=WP_101458108.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	28841	29650	.	+	.	ID=gene-CYJ03_RS09020;Name=CYJ03_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09020;old_locus_tag=CYJ03_009010
NZ_PJUP02000024.1	Protein Homology	CDS	28841	29650	.	+	0	ID=cds-WP_037542205.1;Parent=gene-CYJ03_RS09020;Dbxref=GenBank:WP_037542205.1;Name=WP_037542205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=CYJ03_RS09020;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_037542205.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	29666	30280	.	+	.	ID=gene-CYJ03_RS09025;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CYJ03_RS09025;old_locus_tag=CYJ03_009015
NZ_PJUP02000024.1	Protein Homology	CDS	29666	30280	.	+	0	ID=cds-WP_063284764.1;Parent=gene-CYJ03_RS09025;Dbxref=GenBank:WP_063284764.1;Name=WP_063284764.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=CYJ03_RS09025;product=ATP phosphoribosyltransferase;protein_id=WP_063284764.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	30270	31529	.	+	.	ID=gene-CYJ03_RS09030;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09030;old_locus_tag=CYJ03_009020
NZ_PJUP02000024.1	Protein Homology	CDS	30270	31529	.	+	0	ID=cds-WP_101458107.1;Parent=gene-CYJ03_RS09030;Dbxref=GenBank:WP_101458107.1;Name=WP_101458107.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=CYJ03_RS09030;product=histidinol dehydrogenase;protein_id=WP_101458107.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	31526	32539	.	+	.	ID=gene-CYJ03_RS09035;Name=CYJ03_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09035;old_locus_tag=CYJ03_009025
NZ_PJUP02000024.1	Protein Homology	CDS	31526	32539	.	+	0	ID=cds-WP_101431657.1;Parent=gene-CYJ03_RS09035;Dbxref=GenBank:WP_101431657.1;Name=WP_101431657.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=CYJ03_RS09035;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_101431657.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	32523	33104	.	+	.	ID=gene-CYJ03_RS09040;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09040;old_locus_tag=CYJ03_009030
NZ_PJUP02000024.1	Protein Homology	CDS	32523	33104	.	+	0	ID=cds-WP_101431656.1;Parent=gene-CYJ03_RS09040;Dbxref=GenBank:WP_101431656.1;Name=WP_101431656.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167083.1;locus_tag=CYJ03_RS09040;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_101431656.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	33101	33676	.	+	.	ID=gene-CYJ03_RS09045;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CYJ03_RS09045;old_locus_tag=CYJ03_009035
NZ_PJUP02000024.1	Protein Homology	CDS	33101	33676	.	+	0	ID=cds-WP_101431655.1;Parent=gene-CYJ03_RS09045;Dbxref=GenBank:WP_101431655.1;Name=WP_101431655.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=CYJ03_RS09045;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_101431655.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	33669	34373	.	+	.	ID=gene-CYJ03_RS09050;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09050;old_locus_tag=CYJ03_009040
NZ_PJUP02000024.1	Protein Homology	CDS	33669	34373	.	+	0	ID=cds-WP_101458105.1;Parent=gene-CYJ03_RS09050;Dbxref=GenBank:WP_101458105.1;Name=WP_101458105.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=CYJ03_RS09050;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_101458105.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	34370	35134	.	+	.	ID=gene-CYJ03_RS12855;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CYJ03_RS12855;old_locus_tag=CYJ03_009045
NZ_PJUP02000024.1	Protein Homology	CDS	34370	35134	.	+	0	ID=cds-WP_063278617.1;Parent=gene-CYJ03_RS12855;Dbxref=GenBank:WP_063278617.1;Name=WP_063278617.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168443.1;locus_tag=CYJ03_RS12855;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_063278617.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	35125	35754	.	+	.	ID=gene-CYJ03_RS12860;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CYJ03_RS12860;old_locus_tag=CYJ03_009050
NZ_PJUP02000024.1	Protein Homology	CDS	35125	35754	.	+	0	ID=cds-WP_037542201.1;Parent=gene-CYJ03_RS12860;Dbxref=GenBank:WP_037542201.1;Name=WP_037542201.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=CYJ03_RS12860;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_037542201.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	36220	37089	.	-	.	ID=gene-CYJ03_RS09065;Name=CYJ03_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09065;old_locus_tag=CYJ03_009055
NZ_PJUP02000024.1	Protein Homology	CDS	36220	37089	.	-	0	ID=cds-WP_020219437.1;Parent=gene-CYJ03_RS09065;Dbxref=GenBank:WP_020219437.1;Name=WP_020219437.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219437.1;locus_tag=CYJ03_RS09065;product=DMT family transporter;protein_id=WP_020219437.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	37086	37766	.	-	.	ID=gene-CYJ03_RS09070;Name=CYJ03_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09070;old_locus_tag=CYJ03_009060
NZ_PJUP02000024.1	Protein Homology	CDS	37086	37766	.	-	0	ID=cds-WP_037542198.1;Parent=gene-CYJ03_RS09070;Dbxref=GenBank:WP_037542198.1;Name=WP_037542198.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729689.1;locus_tag=CYJ03_RS09070;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_037542198.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	38601	38873	.	-	.	ID=gene-CYJ03_RS09075;Name=CYJ03_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09075;old_locus_tag=CYJ03_009065
NZ_PJUP02000024.1	GeneMarkS-2+	CDS	38601	38873	.	-	0	ID=cds-WP_051144720.1;Parent=gene-CYJ03_RS09075;Dbxref=GenBank:WP_051144720.1;Name=WP_051144720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS09075;product=hypothetical protein;protein_id=WP_051144720.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	gene	39159	40160	.	-	.	ID=gene-CYJ03_RS09080;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ03_RS09080;old_locus_tag=CYJ03_009070
NZ_PJUP02000024.1	Protein Homology	CDS	39159	40160	.	-	0	ID=cds-WP_178386884.1;Parent=gene-CYJ03_RS09080;Dbxref=GenBank:WP_178386884.1;Name=WP_178386884.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508858.1;locus_tag=CYJ03_RS09080;product=ornithine carbamoyltransferase;protein_id=WP_178386884.1;transl_table=11
NZ_PJUP02000024.1	RefSeq	pseudogene	40520	40703	.	-	.	ID=gene-CYJ03_RS09085;Name=CYJ03_RS09085;end_range=40703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS09085;old_locus_tag=CYJ03_009075;partial=true;pseudo=true
NZ_PJUP02000024.1	Protein Homology	CDS	40520	40703	.	-	1	ID=cds-CYJ03_RS09085;Parent=gene-CYJ03_RS09085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=40703,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS09085;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000021.1 1 41216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000021.1	RefSeq	region	1	41216	.	+	.	ID=NZ_PJUP02000021.1:1..41216;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000021.1	RefSeq	gene	355	1425	.	+	.	ID=gene-CYJ03_RS08165;Name=CYJ03_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08165;old_locus_tag=CYJ03_008155
NZ_PJUP02000021.1	Protein Homology	CDS	355	1425	.	+	0	ID=cds-WP_070407378.1;Parent=gene-CYJ03_RS08165;Dbxref=GenBank:WP_070407378.1;Name=WP_070407378.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219481.1;locus_tag=CYJ03_RS08165;product=PTS sugar transporter subunit IIC;protein_id=WP_070407378.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	1722	3971	.	+	.	ID=gene-CYJ03_RS08170;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08170;old_locus_tag=CYJ03_008160
NZ_PJUP02000021.1	Protein Homology	CDS	1722	3971	.	+	0	ID=cds-WP_014613011.1;Parent=gene-CYJ03_RS08170;Dbxref=GenBank:WP_014613011.1;Name=WP_014613011.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169534.1;locus_tag=CYJ03_RS08170;product=formate C-acetyltransferase;protein_id=WP_014613011.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	4030	4791	.	+	.	ID=gene-CYJ03_RS08175;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08175;old_locus_tag=CYJ03_008165
NZ_PJUP02000021.1	Protein Homology	CDS	4030	4791	.	+	0	ID=cds-WP_014613012.1;Parent=gene-CYJ03_RS08175;Dbxref=GenBank:WP_014613012.1;Name=WP_014613012.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166512.1;locus_tag=CYJ03_RS08175;product=pyruvate formate-lyase-activating protein;protein_id=WP_014613012.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	5394	6053	.	+	.	ID=gene-CYJ03_RS08180;Name=CYJ03_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08180;old_locus_tag=CYJ03_008170
NZ_PJUP02000021.1	Protein Homology	CDS	5394	6053	.	+	0	ID=cds-WP_014613014.1;Parent=gene-CYJ03_RS08180;Dbxref=GenBank:WP_014613014.1;Name=WP_014613014.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169536.1;locus_tag=CYJ03_RS08180;product=SDR family oxidoreductase;protein_id=WP_014613014.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	6347	8071	.	+	.	ID=gene-CYJ03_RS08185;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ03_RS08185;old_locus_tag=CYJ03_008175
NZ_PJUP02000021.1	Protein Homology	CDS	6347	8071	.	+	0	ID=cds-WP_037542303.1;Parent=gene-CYJ03_RS08185;Dbxref=GenBank:WP_037542303.1;Name=WP_037542303.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613015.1;locus_tag=CYJ03_RS08185;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_037542303.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	8199	9206	.	+	.	ID=gene-CYJ03_RS08190;Name=CYJ03_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08190;old_locus_tag=CYJ03_008180
NZ_PJUP02000021.1	Protein Homology	CDS	8199	9206	.	+	0	ID=cds-WP_037544117.1;Parent=gene-CYJ03_RS08190;Dbxref=GenBank:WP_037544117.1;Name=WP_037544117.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613016.1;locus_tag=CYJ03_RS08190;product=ABC transporter ATP-binding protein;protein_id=WP_037544117.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	9203	10192	.	+	.	ID=gene-CYJ03_RS08195;Name=CYJ03_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08195;old_locus_tag=CYJ03_008185
NZ_PJUP02000021.1	Protein Homology	CDS	9203	10192	.	+	0	ID=cds-WP_037542304.1;Parent=gene-CYJ03_RS08195;Dbxref=GenBank:WP_037542304.1;Name=WP_037542304.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613017.1;locus_tag=CYJ03_RS08195;product=ABC transporter ATP-binding protein;protein_id=WP_037542304.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	10189	11151	.	+	.	ID=gene-CYJ03_RS08200;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ03_RS08200;old_locus_tag=CYJ03_008190
NZ_PJUP02000021.1	Protein Homology	CDS	10189	11151	.	+	0	ID=cds-WP_014613018.1;Parent=gene-CYJ03_RS08200;Dbxref=GenBank:WP_014613018.1;Name=WP_014613018.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ03_RS08200;product=oligopeptide ABC transporter permease;protein_id=WP_014613018.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	11163	12056	.	+	.	ID=gene-CYJ03_RS08205;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ03_RS08205;old_locus_tag=CYJ03_008195
NZ_PJUP02000021.1	Protein Homology	CDS	11163	12056	.	+	0	ID=cds-WP_014613019.1;Parent=gene-CYJ03_RS08205;Dbxref=GenBank:WP_014613019.1;Name=WP_014613019.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613019.1;locus_tag=CYJ03_RS08205;product=oligopeptide ABC transporter permease;protein_id=WP_014613019.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	12288	14009	.	+	.	ID=gene-CYJ03_RS08210;Name=opp4A;gbkey=Gene;gene=opp4A;gene_biotype=protein_coding;locus_tag=CYJ03_RS08210;old_locus_tag=CYJ03_008200
NZ_PJUP02000021.1	Protein Homology	CDS	12288	14009	.	+	0	ID=cds-WP_014613020.1;Parent=gene-CYJ03_RS08210;Dbxref=GenBank:WP_014613020.1;Name=WP_014613020.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4A;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613020.1;locus_tag=CYJ03_RS08210;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_014613020.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	14115	15125	.	+	.	ID=gene-CYJ03_RS08215;Name=CYJ03_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08215;old_locus_tag=CYJ03_008205
NZ_PJUP02000021.1	Protein Homology	CDS	14115	15125	.	+	0	ID=cds-WP_014613021.1;Parent=gene-CYJ03_RS08215;Dbxref=GenBank:WP_014613021.1;Name=WP_014613021.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613021.1;locus_tag=CYJ03_RS08215;product=ABC transporter ATP-binding protein;protein_id=WP_014613021.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	15118	16104	.	+	.	ID=gene-CYJ03_RS08220;Name=CYJ03_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08220;old_locus_tag=CYJ03_008210
NZ_PJUP02000021.1	Protein Homology	CDS	15118	16104	.	+	0	ID=cds-WP_014613022.1;Parent=gene-CYJ03_RS08220;Dbxref=GenBank:WP_014613022.1;Name=WP_014613022.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613022.1;locus_tag=CYJ03_RS08220;product=ABC transporter ATP-binding protein;protein_id=WP_014613022.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	16101	17063	.	+	.	ID=gene-CYJ03_RS08225;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=protein_coding;locus_tag=CYJ03_RS08225;old_locus_tag=CYJ03_008215
NZ_PJUP02000021.1	Protein Homology	CDS	16101	17063	.	+	0	ID=cds-WP_014613023.1;Parent=gene-CYJ03_RS08225;Dbxref=GenBank:WP_014613023.1;Name=WP_014613023.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426171.1;locus_tag=CYJ03_RS08225;product=oligopeptide ABC transporter permease;protein_id=WP_014613023.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	17075	17968	.	+	.	ID=gene-CYJ03_RS08230;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=CYJ03_RS08230;old_locus_tag=CYJ03_008220
NZ_PJUP02000021.1	Protein Homology	CDS	17075	17968	.	+	0	ID=cds-WP_014613024.1;Parent=gene-CYJ03_RS08230;Dbxref=GenBank:WP_014613024.1;Name=WP_014613024.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613024.1;locus_tag=CYJ03_RS08230;product=oligopeptide ABC transporter permease;protein_id=WP_014613024.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	18286	18543	.	+	.	ID=gene-CYJ03_RS08235;Name=CYJ03_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08235;old_locus_tag=CYJ03_008225
NZ_PJUP02000021.1	Protein Homology	CDS	18286	18543	.	+	0	ID=cds-WP_014613025.1;Parent=gene-CYJ03_RS08235;Dbxref=GenBank:WP_014613025.1;Name=WP_014613025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613025.1;locus_tag=CYJ03_RS08235;product=hypothetical protein;protein_id=WP_014613025.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	18929	19828	.	-	.	ID=gene-CYJ03_RS08240;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08240;old_locus_tag=CYJ03_008230
NZ_PJUP02000021.1	Protein Homology	CDS	18929	19828	.	-	0	ID=cds-WP_020219490.1;Parent=gene-CYJ03_RS08240;Dbxref=GenBank:WP_020219490.1;Name=WP_020219490.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=CYJ03_RS08240;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_020219490.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	19844	20521	.	-	.	ID=gene-CYJ03_RS08245;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08245;old_locus_tag=CYJ03_008235
NZ_PJUP02000021.1	Protein Homology	CDS	19844	20521	.	-	0	ID=cds-WP_020219491.1;Parent=gene-CYJ03_RS08245;Dbxref=GenBank:WP_020219491.1;Name=WP_020219491.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219491.1;locus_tag=CYJ03_RS08245;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_020219491.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	20536	21567	.	-	.	ID=gene-CYJ03_RS08250;Name=CYJ03_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08250;old_locus_tag=CYJ03_008240
NZ_PJUP02000021.1	Protein Homology	CDS	20536	21567	.	-	0	ID=cds-WP_014613028.1;Parent=gene-CYJ03_RS08250;Dbxref=GenBank:WP_014613028.1;Name=WP_014613028.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=CYJ03_RS08250;product=PTS sugar transporter subunit IIC;protein_id=WP_014613028.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	22127	22306	.	+	.	ID=gene-CYJ03_RS08255;Name=CYJ03_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08255;old_locus_tag=CYJ03_008245
NZ_PJUP02000021.1	Protein Homology	CDS	22127	22306	.	+	0	ID=cds-WP_014613030.1;Parent=gene-CYJ03_RS08255;Dbxref=GenBank:WP_014613030.1;Name=WP_014613030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613030.1;locus_tag=CYJ03_RS08255;product=hypothetical protein;protein_id=WP_014613030.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	22605	23426	.	+	.	ID=gene-CYJ03_RS08260;Name=CYJ03_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08260;old_locus_tag=CYJ03_008250
NZ_PJUP02000021.1	Protein Homology	CDS	22605	23426	.	+	0	ID=cds-WP_101457178.1;Parent=gene-CYJ03_RS08260;Dbxref=GenBank:WP_101457178.1;Name=WP_101457178.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219492.1;locus_tag=CYJ03_RS08260;product=putative phosphoesterase;protein_id=WP_101457178.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	24206	25696	.	+	.	ID=gene-CYJ03_RS08265;Name=CYJ03_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08265;old_locus_tag=CYJ03_008255
NZ_PJUP02000021.1	Protein Homology	CDS	24206	25696	.	+	0	ID=cds-WP_104052289.1;Parent=gene-CYJ03_RS08265;Dbxref=GenBank:WP_104052289.1;Name=WP_104052289.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=CYJ03_RS08265;product=aldehyde dehydrogenase family protein;protein_id=WP_104052289.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	26393	27400	.	+	.	ID=gene-CYJ03_RS08270;Name=CYJ03_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08270;old_locus_tag=CYJ03_008260
NZ_PJUP02000021.1	Protein Homology	CDS	26393	27400	.	+	0	ID=cds-WP_104052290.1;Parent=gene-CYJ03_RS08270;Dbxref=GenBank:WP_104052290.1;Name=WP_104052290.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729607.1;locus_tag=CYJ03_RS08270;product=PTS sugar transporter subunit IIC;protein_id=WP_104052290.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	27498	29030	.	+	.	ID=gene-CYJ03_RS08275;Name=CYJ03_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08275;old_locus_tag=CYJ03_008265
NZ_PJUP02000021.1	Protein Homology	CDS	27498	29030	.	+	0	ID=cds-WP_014613038.1;Parent=gene-CYJ03_RS08275;Dbxref=GenBank:WP_014613038.1;Name=WP_014613038.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729606.1;locus_tag=CYJ03_RS08275;product=SLC13 family permease;protein_id=WP_014613038.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	29246	30070	.	+	.	ID=gene-CYJ03_RS08280;Name=CYJ03_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08280;old_locus_tag=CYJ03_008270
NZ_PJUP02000021.1	Protein Homology	CDS	29246	30070	.	+	0	ID=cds-WP_014613039.1;Parent=gene-CYJ03_RS08280;Dbxref=GenBank:WP_014613039.1;Name=WP_014613039.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613039.1;locus_tag=CYJ03_RS08280;product=formate/nitrite transporter family protein;protein_id=WP_014613039.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	30295	30852	.	+	.	ID=gene-CYJ03_RS08285;Name=CYJ03_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08285;old_locus_tag=CYJ03_008275
NZ_PJUP02000021.1	Protein Homology	CDS	30295	30852	.	+	0	ID=cds-WP_101431516.1;Parent=gene-CYJ03_RS08285;Dbxref=GenBank:WP_101431516.1;Name=WP_101431516.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219494.1;locus_tag=CYJ03_RS08285;product=GNAT family N-acetyltransferase;protein_id=WP_101431516.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	31021	31764	.	+	.	ID=gene-CYJ03_RS08290;Name=CYJ03_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08290;old_locus_tag=CYJ03_008280
NZ_PJUP02000021.1	Protein Homology	CDS	31021	31764	.	+	0	ID=cds-WP_233275674.1;Parent=gene-CYJ03_RS08290;Dbxref=GenBank:WP_233275674.1;Name=WP_233275674.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613041.1;locus_tag=CYJ03_RS08290;product=sirohydrochlorin chelatase;protein_id=WP_233275674.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	31746	32207	.	+	.	ID=gene-CYJ03_RS08295;Name=CYJ03_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08295;old_locus_tag=CYJ03_008285
NZ_PJUP02000021.1	Protein Homology	CDS	31746	32207	.	+	0	ID=cds-WP_104052291.1;Parent=gene-CYJ03_RS08295;Dbxref=GenBank:WP_104052291.1;Name=WP_104052291.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=CYJ03_RS08295;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_104052291.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	32200	34605	.	+	.	ID=gene-CYJ03_RS08300;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08300;old_locus_tag=CYJ03_008290
NZ_PJUP02000021.1	Protein Homology	CDS	32200	34605	.	+	0	ID=cds-WP_104052292.1;Parent=gene-CYJ03_RS08300;Dbxref=GenBank:WP_104052292.1;Name=WP_104052292.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CYJ03_RS08300;product=nitrite reductase large subunit NirB;protein_id=WP_104052292.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	34610	34924	.	+	.	ID=gene-CYJ03_RS08305;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CYJ03_RS08305;old_locus_tag=CYJ03_008295
NZ_PJUP02000021.1	Protein Homology	CDS	34610	34924	.	+	0	ID=cds-WP_014613044.1;Parent=gene-CYJ03_RS08305;Dbxref=GenBank:WP_014613044.1;Name=WP_014613044.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=CYJ03_RS08305;product=nitrite reductase small subunit NirD;protein_id=WP_014613044.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	34912	35859	.	+	.	ID=gene-CYJ03_RS08310;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08310;old_locus_tag=CYJ03_008300
NZ_PJUP02000021.1	Protein Homology	CDS	34912	35859	.	+	0	ID=cds-WP_104052293.1;Parent=gene-CYJ03_RS08310;Dbxref=GenBank:WP_104052293.1;Name=WP_104052293.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613045.1;locus_tag=CYJ03_RS08310;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_104052293.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	36789	39131	.	+	.	ID=gene-CYJ03_RS08315;Name=CYJ03_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08315;old_locus_tag=CYJ03_008305
NZ_PJUP02000021.1	Protein Homology	CDS	36789	39131	.	+	0	ID=cds-WP_104052294.1;Parent=gene-CYJ03_RS08315;Dbxref=GenBank:WP_104052294.1;Name=WP_104052294.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=CYJ03_RS08315;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_104052294.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	gene	39343	39849	.	-	.	ID=gene-CYJ03_RS08320;Name=CYJ03_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08320;old_locus_tag=CYJ03_008310
NZ_PJUP02000021.1	GeneMarkS-2+	CDS	39343	39849	.	-	0	ID=cds-WP_104052295.1;Parent=gene-CYJ03_RS08320;Dbxref=GenBank:WP_104052295.1;Name=WP_104052295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS08320;product=hypothetical protein;protein_id=WP_104052295.1;transl_table=11
NZ_PJUP02000021.1	RefSeq	pseudogene	40317	40421	.	+	.	ID=gene-CYJ03_RS12630;Name=CYJ03_RS12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12630;partial=true;pseudo=true;start_range=.,40317
NZ_PJUP02000021.1	Protein Homology	CDS	40317	40421	.	+	0	ID=cds-CYJ03_RS12630;Parent=gene-CYJ03_RS12630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501176.1;locus_tag=CYJ03_RS12630;partial=true;product=hypothetical protein;pseudo=true;start_range=.,40317;transl_table=11
NZ_PJUP02000021.1	RefSeq	pseudogene	40386	40460	.	-	.	ID=gene-CYJ03_RS12635;Name=CYJ03_RS12635;end_range=40460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12635;partial=true;pseudo=true;start_range=.,40386
NZ_PJUP02000021.1	Protein Homology	CDS	40386	40460	.	-	0	ID=cds-CYJ03_RS12635;Parent=gene-CYJ03_RS12635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=40460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CYJ03_RS12635;partial=true;product=hypothetical protein;pseudo=true;start_range=.,40386;transl_table=11
NZ_PJUP02000021.1	RefSeq	pseudogene	40500	40781	.	+	.	ID=gene-CYJ03_RS08330;Name=CYJ03_RS08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS08330;old_locus_tag=CYJ03_008320;partial=true;pseudo=true;start_range=.,40500
NZ_PJUP02000021.1	Protein Homology	CDS	40500	40781	.	+	0	ID=cds-CYJ03_RS08330;Parent=gene-CYJ03_RS08330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728630.1;locus_tag=CYJ03_RS08330;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,40500;transl_table=11
##sequence-region NZ_PJUP02000020.1 1 47492
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000020.1	RefSeq	region	1	47492	.	+	.	ID=NZ_PJUP02000020.1:1..47492;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000020.1	RefSeq	gene	252	392	.	-	.	ID=gene-CYJ03_RS07900;Name=CYJ03_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07900;old_locus_tag=CYJ03_007890
NZ_PJUP02000020.1	GeneMarkS-2+	CDS	252	392	.	-	0	ID=cds-WP_258058110.1;Parent=gene-CYJ03_RS07900;Dbxref=GenBank:WP_258058110.1;Name=WP_258058110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS07900;product=hypothetical protein;protein_id=WP_258058110.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	pseudogene	401	652	.	-	.	ID=gene-CYJ03_RS07905;Name=rplM;end_range=652,.;gbkey=Gene;gene=rplM;gene_biotype=pseudogene;locus_tag=CYJ03_RS07905;old_locus_tag=CYJ03_007895;partial=true;pseudo=true;start_range=.,401
NZ_PJUP02000020.1	Protein Homology	CDS	401	652	.	-	0	ID=cds-CYJ03_RS07905;Parent=gene-CYJ03_RS07905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0005840;end_range=652,.;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500947.1;locus_tag=CYJ03_RS07905;partial=true;product=50S ribosomal protein L13;pseudo=true;start_range=.,401;transl_table=11
NZ_PJUP02000020.1	RefSeq	pseudogene	639	821	.	-	.	ID=gene-CYJ03_RS07910;Name=CYJ03_RS07910;end_range=821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS07910;old_locus_tag=CYJ03_007900;partial=true;pseudo=true;start_range=.,639
NZ_PJUP02000020.1	Protein Homology	CDS	639	821	.	-	0	ID=cds-CYJ03_RS07910;Parent=gene-CYJ03_RS07910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368615.1;locus_tag=CYJ03_RS07910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,639;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	835	1572	.	+	.	ID=gene-CYJ03_RS07915;Name=CYJ03_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07915;old_locus_tag=CYJ03_007905
NZ_PJUP02000020.1	Protein Homology	CDS	835	1572	.	+	0	ID=cds-WP_373408324.1;Parent=gene-CYJ03_RS07915;Dbxref=GenBank:WP_373408324.1;Name=WP_373408324.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF025857.7;locus_tag=CYJ03_RS07915;product=CAP domain-containing protein;protein_id=WP_373408324.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	1574	2014	.	+	.	ID=gene-CYJ03_RS07920;Name=CYJ03_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07920;old_locus_tag=CYJ03_007910
NZ_PJUP02000020.1	Protein Homology	CDS	1574	2014	.	+	0	ID=cds-WP_101431265.1;Parent=gene-CYJ03_RS07920;Dbxref=GenBank:WP_101431265.1;Name=WP_101431265.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614222.1;locus_tag=CYJ03_RS07920;product=YlbF/YmcA family competence regulator;protein_id=WP_101431265.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	2079	3011	.	-	.	ID=gene-CYJ03_RS07925;Name=CYJ03_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07925;old_locus_tag=CYJ03_007915
NZ_PJUP02000020.1	Protein Homology	CDS	2079	3011	.	-	0	ID=cds-WP_014614221.1;Parent=gene-CYJ03_RS07925;Dbxref=GenBank:WP_014614221.1;Name=WP_014614221.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=CYJ03_RS07925;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_014614221.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	3105	3350	.	+	.	ID=gene-CYJ03_RS07930;Name=CYJ03_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07930;old_locus_tag=CYJ03_007920
NZ_PJUP02000020.1	Protein Homology	CDS	3105	3350	.	+	0	ID=cds-WP_014614220.1;Parent=gene-CYJ03_RS07930;Dbxref=GenBank:WP_014614220.1;Name=WP_014614220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614220.1;locus_tag=CYJ03_RS07930;product=YlbG family protein;protein_id=WP_014614220.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	3353	3742	.	-	.	ID=gene-CYJ03_RS07935;Name=CYJ03_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07935;old_locus_tag=CYJ03_007925
NZ_PJUP02000020.1	Protein Homology	CDS	3353	3742	.	-	0	ID=cds-WP_037543286.1;Parent=gene-CYJ03_RS07935;Dbxref=GenBank:WP_037543286.1;Name=WP_037543286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=CYJ03_RS07935;product=DUF7147 family protein;protein_id=WP_037543286.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	3805	4356	.	+	.	ID=gene-CYJ03_RS07940;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CYJ03_RS07940;old_locus_tag=CYJ03_007930
NZ_PJUP02000020.1	Protein Homology	CDS	3805	4356	.	+	0	ID=cds-WP_104052280.1;Parent=gene-CYJ03_RS07940;Dbxref=GenBank:WP_104052280.1;Name=WP_104052280.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=CYJ03_RS07940;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_104052280.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	4349	4840	.	+	.	ID=gene-CYJ03_RS07945;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CYJ03_RS07945;old_locus_tag=CYJ03_007935
NZ_PJUP02000020.1	Protein Homology	CDS	4349	4840	.	+	0	ID=cds-WP_014614217.1;Parent=gene-CYJ03_RS07945;Dbxref=GenBank:WP_014614217.1;Name=WP_014614217.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=CYJ03_RS07945;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014614217.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	5172	6308	.	-	.	ID=gene-CYJ03_RS07950;Name=CYJ03_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07950;old_locus_tag=CYJ03_007940
NZ_PJUP02000020.1	Protein Homology	CDS	5172	6308	.	-	0	ID=cds-WP_014614216.1;Parent=gene-CYJ03_RS07950;Dbxref=GenBank:WP_014614216.1;Name=WP_014614216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728964.1;locus_tag=CYJ03_RS07950;product=nucleotidyltransferase;protein_id=WP_014614216.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	6435	6974	.	+	.	ID=gene-CYJ03_RS07955;Name=CYJ03_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07955;old_locus_tag=CYJ03_007945
NZ_PJUP02000020.1	Protein Homology	CDS	6435	6974	.	+	0	ID=cds-WP_014614215.1;Parent=gene-CYJ03_RS07955;Dbxref=GenBank:WP_014614215.1;Name=WP_014614215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=CYJ03_RS07955;product=YceD family protein;protein_id=WP_014614215.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	7031	7204	.	+	.	ID=gene-CYJ03_RS07960;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CYJ03_RS07960;old_locus_tag=CYJ03_007950
NZ_PJUP02000020.1	Protein Homology	CDS	7031	7204	.	+	0	ID=cds-WP_014614214.1;Parent=gene-CYJ03_RS07960;Dbxref=GenBank:WP_014614214.1;Name=WP_014614214.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CYJ03_RS07960;product=50S ribosomal protein L32;protein_id=WP_014614214.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	7318	8064	.	+	.	ID=gene-CYJ03_RS07965;Name=CYJ03_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07965;old_locus_tag=CYJ03_007955
NZ_PJUP02000020.1	Protein Homology	CDS	7318	8064	.	+	0	ID=cds-WP_101431266.1;Parent=gene-CYJ03_RS07965;Dbxref=GenBank:WP_101431266.1;Name=WP_101431266.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=CYJ03_RS07965;product=TrmH family RNA methyltransferase;protein_id=WP_101431266.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	8473	9543	.	+	.	ID=gene-CYJ03_RS07970;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07970;old_locus_tag=CYJ03_007960
NZ_PJUP02000020.1	Protein Homology	CDS	8473	9543	.	+	0	ID=cds-WP_014614212.1;Parent=gene-CYJ03_RS07970;Dbxref=GenBank:WP_014614212.1;Name=WP_014614212.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168152.1;locus_tag=CYJ03_RS07970;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014614212.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	9530	11935	.	+	.	ID=gene-CYJ03_RS07975;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CYJ03_RS07975;old_locus_tag=CYJ03_007965
NZ_PJUP02000020.1	Protein Homology	CDS	9530	11935	.	+	0	ID=cds-WP_104052281.1;Parent=gene-CYJ03_RS07975;Dbxref=GenBank:WP_104052281.1;Name=WP_104052281.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=CYJ03_RS07975;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_104052281.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	12047	12640	.	-	.	ID=gene-CYJ03_RS07980;Name=merB;gbkey=Gene;gene=merB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07980;old_locus_tag=CYJ03_007970
NZ_PJUP02000020.1	Protein Homology	CDS	12047	12640	.	-	0	ID=cds-WP_181137783.1;Parent=gene-CYJ03_RS07980;Dbxref=GenBank:WP_181137783.1;Name=WP_181137783.1;Ontology_term=GO:0018836;gbkey=CDS;gene=merB;go_function=alkylmercury lyase activity|0018836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168150.1;locus_tag=CYJ03_RS07980;product=organomercurial lyase;protein_id=WP_181137783.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	13324	14262	.	-	.	ID=gene-CYJ03_RS07985;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=CYJ03_RS07985;old_locus_tag=CYJ03_007975
NZ_PJUP02000020.1	Protein Homology	CDS	13324	14262	.	-	0	ID=cds-WP_101431268.1;Parent=gene-CYJ03_RS07985;Dbxref=GenBank:WP_101431268.1;Name=WP_101431268.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728969.1;locus_tag=CYJ03_RS07985;product=ribonuclease HIII;protein_id=WP_101431268.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	14405	14671	.	+	.	ID=gene-CYJ03_RS07990;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07990;old_locus_tag=CYJ03_007980
NZ_PJUP02000020.1	Protein Homology	CDS	14405	14671	.	+	0	ID=cds-WP_014614208.1;Parent=gene-CYJ03_RS07990;Dbxref=GenBank:WP_014614208.1;Name=WP_014614208.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614208.1;locus_tag=CYJ03_RS07990;product=cell division protein ZapA;protein_id=WP_014614208.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	14673	15194	.	+	.	ID=gene-CYJ03_RS07995;Name=CYJ03_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07995;old_locus_tag=CYJ03_007985
NZ_PJUP02000020.1	Protein Homology	CDS	14673	15194	.	+	0	ID=cds-WP_101431269.1;Parent=gene-CYJ03_RS07995;Dbxref=GenBank:WP_101431269.1;Name=WP_101431269.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166358.1;locus_tag=CYJ03_RS07995;product=CvpA family protein;protein_id=WP_101431269.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	15267	16976	.	+	.	ID=gene-CYJ03_RS08000;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=CYJ03_RS08000;old_locus_tag=CYJ03_007990
NZ_PJUP02000020.1	Protein Homology	CDS	15267	16976	.	+	0	ID=cds-WP_101431270.1;Parent=gene-CYJ03_RS08000;Dbxref=GenBank:WP_101431270.1;Name=WP_101431270.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614206.1;locus_tag=CYJ03_RS08000;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_101431270.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	16992	19340	.	+	.	ID=gene-CYJ03_RS08005;Name=CYJ03_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08005;old_locus_tag=CYJ03_007995
NZ_PJUP02000020.1	Protein Homology	CDS	16992	19340	.	+	0	ID=cds-WP_101431271.1;Parent=gene-CYJ03_RS08005;Dbxref=GenBank:WP_101431271.1;Name=WP_101431271.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=CYJ03_RS08005;product=endonuclease MutS2;protein_id=WP_101431271.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	19419	19733	.	+	.	ID=gene-CYJ03_RS08010;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08010;old_locus_tag=CYJ03_008000
NZ_PJUP02000020.1	Protein Homology	CDS	19419	19733	.	+	0	ID=cds-WP_014614204.1;Parent=gene-CYJ03_RS08010;Dbxref=GenBank:WP_014614204.1;Name=WP_014614204.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=CYJ03_RS08010;product=thioredoxin;protein_id=WP_014614204.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	20000	21787	.	+	.	ID=gene-CYJ03_RS08015;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CYJ03_RS08015;old_locus_tag=CYJ03_008005
NZ_PJUP02000020.1	Protein Homology	CDS	20000	21787	.	+	0	ID=cds-WP_104052282.1;Parent=gene-CYJ03_RS08015;Dbxref=GenBank:WP_104052282.1;Name=WP_104052282.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614203.1;locus_tag=CYJ03_RS08015;product=excinuclease ABC subunit UvrC;protein_id=WP_104052282.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	21952	22563	.	+	.	ID=gene-CYJ03_RS08020;Name=CYJ03_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08020;old_locus_tag=CYJ03_008010
NZ_PJUP02000020.1	Protein Homology	CDS	21952	22563	.	+	0	ID=cds-WP_096548623.1;Parent=gene-CYJ03_RS08020;Dbxref=GenBank:WP_096548623.1;Name=WP_096548623.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637638.1;locus_tag=CYJ03_RS08020;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_096548623.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	22596	24362	.	+	.	ID=gene-CYJ03_RS08025;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08025;old_locus_tag=CYJ03_008015
NZ_PJUP02000020.1	Protein Homology	CDS	22596	24362	.	+	0	ID=cds-WP_014614201.1;Parent=gene-CYJ03_RS08025;Dbxref=GenBank:WP_014614201.1;Name=WP_014614201.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=CYJ03_RS08025;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_014614201.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	24362	25177	.	+	.	ID=gene-CYJ03_RS08030;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08030;old_locus_tag=CYJ03_008020
NZ_PJUP02000020.1	Protein Homology	CDS	24362	25177	.	+	0	ID=cds-WP_014614200.1;Parent=gene-CYJ03_RS08030;Dbxref=GenBank:WP_014614200.1;Name=WP_014614200.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365172.1;locus_tag=CYJ03_RS08030;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_014614200.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	25428	26225	.	+	.	ID=gene-CYJ03_RS08035;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=CYJ03_RS08035;old_locus_tag=CYJ03_008025
NZ_PJUP02000020.1	Protein Homology	CDS	25428	26225	.	+	0	ID=cds-WP_014614199.1;Parent=gene-CYJ03_RS08035;Dbxref=GenBank:WP_014614199.1;Name=WP_014614199.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166350.1;locus_tag=CYJ03_RS08035;product=glutamate racemase;protein_id=WP_014614199.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	26237	26821	.	+	.	ID=gene-CYJ03_RS08040;Name=CYJ03_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08040;old_locus_tag=CYJ03_008030
NZ_PJUP02000020.1	Protein Homology	CDS	26237	26821	.	+	0	ID=cds-WP_104052283.1;Parent=gene-CYJ03_RS08040;Dbxref=GenBank:WP_104052283.1;Name=WP_104052283.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614198.1;locus_tag=CYJ03_RS08040;product=XTP/dITP diphosphatase;protein_id=WP_104052283.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	26818	27327	.	+	.	ID=gene-CYJ03_RS08045;Name=CYJ03_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08045;old_locus_tag=CYJ03_008035
NZ_PJUP02000020.1	Protein Homology	CDS	26818	27327	.	+	0	ID=cds-WP_014614197.1;Parent=gene-CYJ03_RS08045;Dbxref=GenBank:WP_014614197.1;Name=WP_014614197.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166348.1;locus_tag=CYJ03_RS08045;product=YfcE family phosphodiesterase;protein_id=WP_014614197.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	27518	27583	.	-	.	ID=gene-CYJ03_RS12840;Name=CYJ03_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12840;old_locus_tag=CYJ03_008040
NZ_PJUP02000020.1	Protein Homology	CDS	27518	27583	.	-	0	ID=cds-WP_095658924.1;Parent=gene-CYJ03_RS12840;Dbxref=GenBank:WP_095658924.1;Name=WP_095658924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=CYJ03_RS12840;product=epsilon family phenol-soluble modulin;protein_id=WP_095658924.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	28011	28103	.	-	.	ID=gene-CYJ03_RS12845;Name=CYJ03_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12845;old_locus_tag=CYJ03_008045
NZ_PJUP02000020.1	Protein Homology	CDS	28011	28103	.	-	0	ID=cds-WP_080552894.1;Parent=gene-CYJ03_RS12845;Dbxref=GenBank:WP_080552894.1;Name=WP_080552894.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019493.7;locus_tag=CYJ03_RS12845;product=ribbon-helix-helix domain-containing protein;protein_id=WP_080552894.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	pseudogene	28241	28780	.	+	.	ID=gene-CYJ03_RS08060;Name=CYJ03_RS08060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS08060;old_locus_tag=CYJ03_008050;partial=true;pseudo=true;start_range=.,28241
NZ_PJUP02000020.1	Protein Homology	CDS	28241	28780	.	+	0	ID=cds-CYJ03_RS08060;Parent=gene-CYJ03_RS08060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500659.1;locus_tag=CYJ03_RS08060;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,28241;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	29076	29267	.	+	.	ID=gene-CYJ03_RS12615;Name=CYJ03_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12615;old_locus_tag=CYJ03_008055
NZ_PJUP02000020.1	GeneMarkS-2+	CDS	29076	29267	.	+	0	ID=cds-WP_157929423.1;Parent=gene-CYJ03_RS12615;Dbxref=GenBank:WP_157929423.1;Name=WP_157929423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12615;product=hypothetical protein;protein_id=WP_157929423.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	29377	29514	.	+	.	ID=gene-CYJ03_RS12620;Name=CYJ03_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12620
NZ_PJUP02000020.1	Protein Homology	CDS	29377	29514	.	+	0	ID=cds-WP_233508767.1;Parent=gene-CYJ03_RS12620;Dbxref=GenBank:WP_233508767.1;Name=WP_233508767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614196.1;locus_tag=CYJ03_RS12620;product=hypothetical protein;protein_id=WP_233508767.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	29533	29895	.	+	.	ID=gene-CYJ03_RS08070;Name=CYJ03_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08070;old_locus_tag=CYJ03_008060
NZ_PJUP02000020.1	Protein Homology	CDS	29533	29895	.	+	0	ID=cds-WP_101431276.1;Parent=gene-CYJ03_RS08070;Dbxref=GenBank:WP_101431276.1;Name=WP_101431276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549762.1;locus_tag=CYJ03_RS08070;product=hypothetical protein;protein_id=WP_101431276.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	30328	30537	.	+	.	ID=gene-CYJ03_RS12625;Name=CYJ03_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12625;old_locus_tag=CYJ03_008065
NZ_PJUP02000020.1	Protein Homology	CDS	30328	30537	.	+	0	ID=cds-WP_101431277.1;Parent=gene-CYJ03_RS12625;Dbxref=GenBank:WP_101431277.1;Name=WP_101431277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071310.1;locus_tag=CYJ03_RS12625;product=hypothetical protein;protein_id=WP_101431277.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	30638	30711	.	-	.	ID=gene-CYJ03_RS08080;Name=CYJ03_RS08080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08080;old_locus_tag=CYJ03_008070
NZ_PJUP02000020.1	tRNAscan-SE	tRNA	30638	30711	.	-	.	ID=rna-CYJ03_RS08080;Parent=gene-CYJ03_RS08080;anticodon=(pos:complement(30675..30677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08080;product=tRNA-Arg
NZ_PJUP02000020.1	tRNAscan-SE	exon	30638	30711	.	-	.	ID=exon-CYJ03_RS08080-1;Parent=rna-CYJ03_RS08080;anticodon=(pos:complement(30675..30677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08080;product=tRNA-Arg
NZ_PJUP02000020.1	RefSeq	gene	31020	31463	.	+	.	ID=gene-CYJ03_RS08085;Name=CYJ03_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08085;old_locus_tag=CYJ03_008075
NZ_PJUP02000020.1	Protein Homology	CDS	31020	31463	.	+	0	ID=cds-WP_014614193.1;Parent=gene-CYJ03_RS08085;Dbxref=GenBank:WP_014614193.1;Name=WP_014614193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614193.1;locus_tag=CYJ03_RS08085;product=VOC family protein;protein_id=WP_014614193.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	31587	32891	.	-	.	ID=gene-CYJ03_RS08090;Name=CYJ03_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08090;old_locus_tag=CYJ03_008080
NZ_PJUP02000020.1	Protein Homology	CDS	31587	32891	.	-	0	ID=cds-WP_063278836.1;Parent=gene-CYJ03_RS08090;Dbxref=GenBank:WP_063278836.1;Name=WP_063278836.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=CYJ03_RS08090;product=TrkH family potassium uptake protein;protein_id=WP_063278836.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	33277	33468	.	-	.	ID=gene-CYJ03_RS12850;Name=CYJ03_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12850;old_locus_tag=CYJ03_008085
NZ_PJUP02000020.1	Protein Homology	CDS	33277	33468	.	-	0	ID=cds-WP_100004271.1;Parent=gene-CYJ03_RS12850;Dbxref=GenBank:WP_100004271.1;Name=WP_100004271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=CYJ03_RS12850;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_100004271.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	33780	33911	.	+	.	ID=gene-CYJ03_RS08100;Name=CYJ03_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08100;old_locus_tag=CYJ03_008090
NZ_PJUP02000020.1	Protein Homology	CDS	33780	33911	.	+	0	ID=cds-WP_014614190.1;Parent=gene-CYJ03_RS08100;Dbxref=GenBank:WP_014614190.1;Name=WP_014614190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=CYJ03_RS08100;product=beta-class phenol-soluble modulin;protein_id=WP_014614190.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	34225	34911	.	+	.	ID=gene-CYJ03_RS08105;Name=CYJ03_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08105;old_locus_tag=CYJ03_008095
NZ_PJUP02000020.1	Protein Homology	CDS	34225	34911	.	+	0	ID=cds-WP_014614189.1;Parent=gene-CYJ03_RS08105;Dbxref=GenBank:WP_014614189.1;Name=WP_014614189.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728988.1;locus_tag=CYJ03_RS08105;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_014614189.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	35101	35550	.	-	.	ID=gene-CYJ03_RS08110;Name=CYJ03_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08110;old_locus_tag=CYJ03_008100
NZ_PJUP02000020.1	Protein Homology	CDS	35101	35550	.	-	0	ID=cds-WP_014614188.1;Parent=gene-CYJ03_RS08110;Dbxref=GenBank:WP_014614188.1;Name=WP_014614188.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614188.1;locus_tag=CYJ03_RS08110;product=N-acetyltransferase;protein_id=WP_014614188.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	35682	37295	.	+	.	ID=gene-CYJ03_RS08115;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CYJ03_RS08115;old_locus_tag=CYJ03_008105
NZ_PJUP02000020.1	Protein Homology	CDS	35682	37295	.	+	0	ID=cds-WP_015728989.1;Parent=gene-CYJ03_RS08115;Dbxref=GenBank:WP_015728989.1;Name=WP_015728989.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165669.1;locus_tag=CYJ03_RS08115;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_015728989.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	37442	37873	.	+	.	ID=gene-CYJ03_RS08120;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS08120;old_locus_tag=CYJ03_008110
NZ_PJUP02000020.1	Protein Homology	CDS	37442	37873	.	+	0	ID=cds-WP_014614186.1;Parent=gene-CYJ03_RS08120;Dbxref=GenBank:WP_014614186.1;Name=WP_014614186.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CYJ03_RS08120;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014614186.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	37891	38826	.	+	.	ID=gene-CYJ03_RS08125;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CYJ03_RS08125;old_locus_tag=CYJ03_008115
NZ_PJUP02000020.1	Protein Homology	CDS	37891	38826	.	+	0	ID=cds-WP_104052284.1;Parent=gene-CYJ03_RS08125;Dbxref=GenBank:WP_104052284.1;Name=WP_104052284.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CYJ03_RS08125;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_104052284.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	38845	39231	.	+	.	ID=gene-CYJ03_RS08130;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CYJ03_RS08130;old_locus_tag=CYJ03_008120
NZ_PJUP02000020.1	Protein Homology	CDS	38845	39231	.	+	0	ID=cds-WP_014614184.1;Parent=gene-CYJ03_RS08130;Dbxref=GenBank:WP_014614184.1;Name=WP_014614184.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446224.1;locus_tag=CYJ03_RS08130;product=cell division protein FtsL;protein_id=WP_014614184.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	39212	41365	.	+	.	ID=gene-CYJ03_RS08135;Name=CYJ03_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08135;old_locus_tag=CYJ03_008125
NZ_PJUP02000020.1	Protein Homology	CDS	39212	41365	.	+	0	ID=cds-WP_070407704.1;Parent=gene-CYJ03_RS08135;Dbxref=GenBank:WP_070407704.1;Name=WP_070407704.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614183.1;locus_tag=CYJ03_RS08135;product=penicillin-binding protein;protein_id=WP_070407704.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	41565	42530	.	+	.	ID=gene-CYJ03_RS08140;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CYJ03_RS08140;old_locus_tag=CYJ03_008130
NZ_PJUP02000020.1	Protein Homology	CDS	41565	42530	.	+	0	ID=cds-WP_104052285.1;Parent=gene-CYJ03_RS08140;Dbxref=GenBank:WP_104052285.1;Name=WP_104052285.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276018.1;locus_tag=CYJ03_RS08140;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_104052285.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	42531	43880	.	+	.	ID=gene-CYJ03_RS08145;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CYJ03_RS08145;old_locus_tag=CYJ03_008135
NZ_PJUP02000020.1	Protein Homology	CDS	42531	43880	.	+	0	ID=cds-WP_104052286.1;Parent=gene-CYJ03_RS08145;Dbxref=GenBank:WP_104052286.1;Name=WP_104052286.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=CYJ03_RS08145;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_104052286.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	43896	44786	.	+	.	ID=gene-CYJ03_RS08150;Name=CYJ03_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08150;old_locus_tag=CYJ03_008140
NZ_PJUP02000020.1	Protein Homology	CDS	43896	44786	.	+	0	ID=cds-WP_104052287.1;Parent=gene-CYJ03_RS08150;Dbxref=GenBank:WP_104052287.1;Name=WP_104052287.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165664.1;locus_tag=CYJ03_RS08150;product=cell division protein FtsQ/DivIB;protein_id=WP_104052287.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	45002	46402	.	+	.	ID=gene-CYJ03_RS08155;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08155;old_locus_tag=CYJ03_008145
NZ_PJUP02000020.1	Protein Homology	CDS	45002	46402	.	+	0	ID=cds-WP_070407703.1;Parent=gene-CYJ03_RS08155;Dbxref=GenBank:WP_070407703.1;Name=WP_070407703.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=CYJ03_RS08155;product=cell division protein FtsA;protein_id=WP_070407703.1;transl_table=11
NZ_PJUP02000020.1	RefSeq	gene	46432	47492	.	+	.	ID=gene-CYJ03_RS08160;Name=ftsZ;end_range=47492,.;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS08160;old_locus_tag=CYJ03_008150;partial=true
NZ_PJUP02000020.1	Protein Homology	CDS	46432	47492	.	+	0	ID=cds-WP_104052288.1;Parent=gene-CYJ03_RS08160;Dbxref=GenBank:WP_104052288.1;Name=WP_104052288.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;end_range=47492,.;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424828.1;locus_tag=CYJ03_RS08160;partial=true;product=cell division protein FtsZ;protein_id=WP_104052288.1;transl_table=11
##sequence-region NZ_PJUP02000026.1 1 39340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000026.1	RefSeq	region	1	39340	.	+	.	ID=NZ_PJUP02000026.1:1..39340;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000026.1	RefSeq	gene	1	211	.	-	.	ID=gene-CYJ03_RS09330;Name=CYJ03_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09330;old_locus_tag=CYJ03_009320;partial=true;start_range=.,1
NZ_PJUP02000026.1	Protein Homology	CDS	1	211	.	-	0	ID=cds-WP_373408329.1;Parent=gene-CYJ03_RS09330;Dbxref=GenBank:WP_373408329.1;Name=WP_373408329.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637818.1;locus_tag=CYJ03_RS09330;partial=true;product=PTS sugar transporter subunit IIC;protein_id=WP_373408329.1;start_range=.,1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	532	1611	.	-	.	ID=gene-CYJ03_RS12940;Name=CYJ03_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12940;old_locus_tag=CYJ03_009325
NZ_PJUP02000026.1	Protein Homology	CDS	532	1611	.	-	0	ID=cds-WP_015729615.1;Parent=gene-CYJ03_RS12940;Dbxref=GenBank:WP_015729615.1;Name=WP_015729615.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613009.1;locus_tag=CYJ03_RS12940;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_015729615.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	2139	2813	.	+	.	ID=gene-CYJ03_RS09340;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09340;old_locus_tag=CYJ03_009330
NZ_PJUP02000026.1	Protein Homology	CDS	2139	2813	.	+	0	ID=cds-WP_014613008.1;Parent=gene-CYJ03_RS09340;Dbxref=GenBank:WP_014613008.1;Name=WP_014613008.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166508.1;locus_tag=CYJ03_RS09340;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_014613008.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	2885	3418	.	-	.	ID=gene-CYJ03_RS09345;Name=CYJ03_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09345;old_locus_tag=CYJ03_009335
NZ_PJUP02000026.1	Protein Homology	CDS	2885	3418	.	-	0	ID=cds-WP_014613007.1;Parent=gene-CYJ03_RS09345;Dbxref=GenBank:WP_014613007.1;Name=WP_014613007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166507.1;locus_tag=CYJ03_RS09345;product=LURP-one-related family protein;protein_id=WP_014613007.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	3423	4568	.	-	.	ID=gene-CYJ03_RS09350;Name=CYJ03_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09350;old_locus_tag=CYJ03_009340
NZ_PJUP02000026.1	Protein Homology	CDS	3423	4568	.	-	0	ID=cds-WP_101431643.1;Parent=gene-CYJ03_RS09350;Dbxref=GenBank:WP_101431643.1;Name=WP_101431643.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169529.1;locus_tag=CYJ03_RS09350;product=glycerate kinase family protein;protein_id=WP_101431643.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	4739	5335	.	-	.	ID=gene-CYJ03_RS09355;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09355;old_locus_tag=CYJ03_009345
NZ_PJUP02000026.1	Protein Homology	CDS	4739	5335	.	-	0	ID=cds-WP_065520356.1;Parent=gene-CYJ03_RS09355;Dbxref=GenBank:WP_065520356.1;Name=WP_065520356.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219480.1;locus_tag=CYJ03_RS09355;product=class A sortase SrtA;protein_id=WP_065520356.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	5721	6986	.	-	.	ID=gene-CYJ03_RS09360;Name=CYJ03_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09360;old_locus_tag=CYJ03_009350
NZ_PJUP02000026.1	Protein Homology	CDS	5721	6986	.	-	0	ID=cds-WP_014613004.1;Parent=gene-CYJ03_RS09360;Dbxref=GenBank:WP_014613004.1;Name=WP_014613004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613004.1;locus_tag=CYJ03_RS09360;product=pyruvate MFS transporter;protein_id=WP_014613004.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	7227	8408	.	-	.	ID=gene-CYJ03_RS09365;Name=CYJ03_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09365;old_locus_tag=CYJ03_009355
NZ_PJUP02000026.1	Protein Homology	CDS	7227	8408	.	-	0	ID=cds-WP_101431644.1;Parent=gene-CYJ03_RS09365;Dbxref=GenBank:WP_101431644.1;Name=WP_101431644.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166503.1;locus_tag=CYJ03_RS09365;product=MFS transporter;protein_id=WP_101431644.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	8924	10879	.	+	.	ID=gene-CYJ03_RS09370;Name=CYJ03_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09370;old_locus_tag=CYJ03_009360
NZ_PJUP02000026.1	Protein Homology	CDS	8924	10879	.	+	0	ID=cds-WP_037542294.1;Parent=gene-CYJ03_RS09370;Dbxref=GenBank:WP_037542294.1;Name=WP_037542294.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499540.1;locus_tag=CYJ03_RS09370;product=fructose-bisphosphatase class III;protein_id=WP_037542294.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	12304	13698	.	+	.	ID=gene-CYJ03_RS09375;Name=CYJ03_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09375;old_locus_tag=CYJ03_009365
NZ_PJUP02000026.1	Protein Homology	CDS	12304	13698	.	+	0	ID=cds-WP_101457176.1;Parent=gene-CYJ03_RS09375;Dbxref=GenBank:WP_101457176.1;Name=WP_101457176.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166345.1;locus_tag=CYJ03_RS09375;product=alanine/glycine:cation symporter family protein;protein_id=WP_101457176.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	14046	14477	.	+	.	ID=gene-CYJ03_RS09380;Name=CYJ03_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09380;old_locus_tag=CYJ03_009370
NZ_PJUP02000026.1	Protein Homology	CDS	14046	14477	.	+	0	ID=cds-WP_181137785.1;Parent=gene-CYJ03_RS09380;Dbxref=GenBank:WP_181137785.1;Name=WP_181137785.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=CYJ03_RS09380;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_181137785.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	14749	14877	.	+	.	ID=gene-CYJ03_RS12655;Name=CYJ03_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12655
NZ_PJUP02000026.1	GeneMarkS-2+	CDS	14749	14877	.	+	0	ID=cds-WP_258058113.1;Parent=gene-CYJ03_RS12655;Dbxref=GenBank:WP_258058113.1;Name=WP_258058113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12655;product=VOC family protein;protein_id=WP_258058113.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	15026	15766	.	+	.	ID=gene-CYJ03_RS09390;Name=CYJ03_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09390;old_locus_tag=CYJ03_009380
NZ_PJUP02000026.1	Protein Homology	CDS	15026	15766	.	+	0	ID=cds-WP_101457175.1;Parent=gene-CYJ03_RS09390;Dbxref=GenBank:WP_101457175.1;Name=WP_101457175.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166342.1;locus_tag=CYJ03_RS09390;product=MerR family transcriptional regulator;protein_id=WP_101457175.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	16738	18516	.	-	.	ID=gene-CYJ03_RS09395;Name=CYJ03_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09395;old_locus_tag=CYJ03_009385
NZ_PJUP02000026.1	Protein Homology	CDS	16738	18516	.	-	0	ID=cds-WP_101457174.1;Parent=gene-CYJ03_RS09395;Dbxref=GenBank:WP_101457174.1;Name=WP_101457174.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612998.1;locus_tag=CYJ03_RS09395;product=ABC transporter ATP-binding protein;protein_id=WP_101457174.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	18497	20290	.	-	.	ID=gene-CYJ03_RS09400;Name=CYJ03_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09400;old_locus_tag=CYJ03_009390
NZ_PJUP02000026.1	Protein Homology	CDS	18497	20290	.	-	0	ID=cds-WP_101457173.1;Parent=gene-CYJ03_RS09400;Dbxref=GenBank:WP_101457173.1;Name=WP_101457173.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165924.1;locus_tag=CYJ03_RS09400;product=ABC transporter ATP-binding protein;protein_id=WP_101457173.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	20446	21726	.	-	.	ID=gene-CYJ03_RS09405;Name=CYJ03_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09405;old_locus_tag=CYJ03_009395
NZ_PJUP02000026.1	Protein Homology	CDS	20446	21726	.	-	0	ID=cds-WP_101431261.1;Parent=gene-CYJ03_RS09405;Dbxref=GenBank:WP_101431261.1;Name=WP_101431261.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612996.1;locus_tag=CYJ03_RS09405;product=(Fe-S)-binding protein;protein_id=WP_101431261.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	21716	23137	.	-	.	ID=gene-CYJ03_RS09410;Name=CYJ03_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09410;old_locus_tag=CYJ03_009400
NZ_PJUP02000026.1	Protein Homology	CDS	21716	23137	.	-	0	ID=cds-WP_015729622.1;Parent=gene-CYJ03_RS09410;Dbxref=GenBank:WP_015729622.1;Name=WP_015729622.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165921.1;locus_tag=CYJ03_RS09410;product=FAD-binding oxidoreductase;protein_id=WP_015729622.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	23358	23786	.	+	.	ID=gene-CYJ03_RS09415;Name=CYJ03_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09415;old_locus_tag=CYJ03_009405
NZ_PJUP02000026.1	Protein Homology	CDS	23358	23786	.	+	0	ID=cds-WP_014612994.1;Parent=gene-CYJ03_RS09415;Dbxref=GenBank:WP_014612994.1;Name=WP_014612994.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=CYJ03_RS09415;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_014612994.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	24077	24805	.	-	.	ID=gene-CYJ03_RS09420;Name=CYJ03_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09420;old_locus_tag=CYJ03_009410
NZ_PJUP02000026.1	Protein Homology	CDS	24077	24805	.	-	0	ID=cds-WP_014612993.1;Parent=gene-CYJ03_RS09420;Dbxref=GenBank:WP_014612993.1;Name=WP_014612993.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165919.1;locus_tag=CYJ03_RS09420;product=S1 family peptidase;protein_id=WP_014612993.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	25263	25973	.	-	.	ID=gene-CYJ03_RS09425;Name=CYJ03_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09425;old_locus_tag=CYJ03_009415
NZ_PJUP02000026.1	Protein Homology	CDS	25263	25973	.	-	0	ID=cds-WP_014612992.1;Parent=gene-CYJ03_RS09425;Dbxref=GenBank:WP_014612992.1;Name=WP_014612992.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=CYJ03_RS09425;product=HAD family hydrolase;protein_id=WP_014612992.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	26093	26842	.	-	.	ID=gene-CYJ03_RS09430;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09430;old_locus_tag=CYJ03_009420
NZ_PJUP02000026.1	Protein Homology	CDS	26093	26842	.	-	0	ID=cds-WP_101457172.1;Parent=gene-CYJ03_RS09430;Dbxref=GenBank:WP_101457172.1;Name=WP_101457172.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729624.1;locus_tag=CYJ03_RS09430;product=tryptophan synthase subunit alpha;protein_id=WP_101457172.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	26845	28050	.	-	.	ID=gene-CYJ03_RS09435;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09435;old_locus_tag=CYJ03_009425
NZ_PJUP02000026.1	Protein Homology	CDS	26845	28050	.	-	0	ID=cds-WP_015729625.1;Parent=gene-CYJ03_RS09435;Dbxref=GenBank:WP_015729625.1;Name=WP_015729625.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219476.1;locus_tag=CYJ03_RS09435;product=tryptophan synthase subunit beta;protein_id=WP_015729625.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	28053	28676	.	-	.	ID=gene-CYJ03_RS09440;Name=CYJ03_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09440;old_locus_tag=CYJ03_009430
NZ_PJUP02000026.1	Protein Homology	CDS	28053	28676	.	-	0	ID=cds-WP_101457171.1;Parent=gene-CYJ03_RS09440;Dbxref=GenBank:WP_101457171.1;Name=WP_101457171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=CYJ03_RS09440;product=phosphoribosylanthranilate isomerase;protein_id=WP_101457171.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	28678	29457	.	-	.	ID=gene-CYJ03_RS09445;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09445;old_locus_tag=CYJ03_009435
NZ_PJUP02000026.1	Protein Homology	CDS	28678	29457	.	-	0	ID=cds-WP_101457170.1;Parent=gene-CYJ03_RS09445;Dbxref=GenBank:WP_101457170.1;Name=WP_101457170.1;Ontology_term=GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612988.1;locus_tag=CYJ03_RS09445;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_101457170.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	29454	30458	.	-	.	ID=gene-CYJ03_RS09450;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09450;old_locus_tag=CYJ03_009440
NZ_PJUP02000026.1	Protein Homology	CDS	29454	30458	.	-	0	ID=cds-WP_014612987.1;Parent=gene-CYJ03_RS09450;Dbxref=GenBank:WP_014612987.1;Name=WP_014612987.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612987.1;locus_tag=CYJ03_RS09450;product=anthranilate phosphoribosyltransferase;protein_id=WP_014612987.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	30442	31026	.	-	.	ID=gene-CYJ03_RS09455;Name=CYJ03_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09455;old_locus_tag=CYJ03_009445
NZ_PJUP02000026.1	Protein Homology	CDS	30442	31026	.	-	0	ID=cds-WP_037542279.1;Parent=gene-CYJ03_RS09455;Dbxref=GenBank:WP_037542279.1;Name=WP_037542279.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=CYJ03_RS09455;product=anthranilate synthase component II;protein_id=WP_037542279.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	31023	32426	.	-	.	ID=gene-CYJ03_RS09460;Name=CYJ03_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09460;old_locus_tag=CYJ03_009450
NZ_PJUP02000026.1	Protein Homology	CDS	31023	32426	.	-	0	ID=cds-WP_014612985.1;Parent=gene-CYJ03_RS09460;Dbxref=GenBank:WP_014612985.1;Name=WP_014612985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=CYJ03_RS09460;product=anthranilate synthase component I;protein_id=WP_014612985.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	33516	35162	.	-	.	ID=gene-CYJ03_RS09465;Name=CYJ03_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09465;old_locus_tag=CYJ03_009455
NZ_PJUP02000026.1	Protein Homology	CDS	33516	35162	.	-	0	ID=cds-WP_014612984.1;Parent=gene-CYJ03_RS09465;Dbxref=GenBank:WP_014612984.1;Name=WP_014612984.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166658.1;locus_tag=CYJ03_RS09465;product=alpha-keto acid decarboxylase family protein;protein_id=WP_014612984.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	35396	36385	.	+	.	ID=gene-CYJ03_RS09470;Name=CYJ03_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09470;old_locus_tag=CYJ03_009460
NZ_PJUP02000026.1	Protein Homology	CDS	35396	36385	.	+	0	ID=cds-WP_104052319.1;Parent=gene-CYJ03_RS09470;Dbxref=GenBank:WP_104052319.1;Name=WP_104052319.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167214.1;locus_tag=CYJ03_RS09470;product=YeiH family protein;protein_id=WP_104052319.1;transl_table=11
NZ_PJUP02000026.1	RefSeq	gene	37163	38293	.	+	.	ID=gene-CYJ03_RS09475;Name=CYJ03_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09475;old_locus_tag=CYJ03_009465
NZ_PJUP02000026.1	Protein Homology	CDS	37163	38293	.	+	0	ID=cds-WP_101431257.1;Parent=gene-CYJ03_RS09475;Dbxref=GenBank:WP_101431257.1;Name=WP_101431257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612982.1;locus_tag=CYJ03_RS09475;product=sugar diacid recognition domain-containing protein;protein_id=WP_101431257.1;transl_table=11
##sequence-region NZ_PJUP02000036.1 1 26078
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000036.1	RefSeq	region	1	26078	.	+	.	ID=NZ_PJUP02000036.1:1..26078;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000036.1	RefSeq	pseudogene	73	612	.	+	.	ID=gene-CYJ03_RS10860;Name=CYJ03_RS10860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10860;old_locus_tag=CYJ03_010850;partial=true;pseudo=true;start_range=.,73
NZ_PJUP02000036.1	Protein Homology	CDS	73	612	.	+	0	ID=cds-CYJ03_RS10860;Parent=gene-CYJ03_RS10860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613404.1;locus_tag=CYJ03_RS10860;partial=true;product=MFS transporter;pseudo=true;start_range=.,73;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	778	1425	.	-	.	ID=gene-CYJ03_RS10865;Name=CYJ03_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10865;old_locus_tag=CYJ03_010855
NZ_PJUP02000036.1	Protein Homology	CDS	778	1425	.	-	0	ID=cds-WP_014613403.1;Parent=gene-CYJ03_RS10865;Dbxref=GenBank:WP_014613403.1;Name=WP_014613403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613403.1;locus_tag=CYJ03_RS10865;product=redox-sensing transcriptional repressor Rex;protein_id=WP_014613403.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	1579	3531	.	+	.	ID=gene-CYJ03_RS10870;Name=CYJ03_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10870;old_locus_tag=CYJ03_010860
NZ_PJUP02000036.1	Protein Homology	CDS	1579	3531	.	+	0	ID=cds-WP_104052356.1;Parent=gene-CYJ03_RS10870;Dbxref=GenBank:WP_104052356.1;Name=WP_104052356.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729418.1;locus_tag=CYJ03_RS10870;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_104052356.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	3894	5477	.	+	.	ID=gene-CYJ03_RS10875;Name=CYJ03_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10875;old_locus_tag=CYJ03_010865
NZ_PJUP02000036.1	Protein Homology	CDS	3894	5477	.	+	0	ID=cds-WP_101457303.1;Parent=gene-CYJ03_RS10875;Dbxref=GenBank:WP_101457303.1;Name=WP_101457303.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613401.1;locus_tag=CYJ03_RS10875;product=MutS-related protein;protein_id=WP_101457303.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	pseudogene	6005	6223	.	+	.	ID=gene-CYJ03_RS10880;Name=CYJ03_RS10880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10880;old_locus_tag=CYJ03_010870;partial=true;pseudo=true;start_range=.,6005
NZ_PJUP02000036.1	Protein Homology	CDS	6005	6223	.	+	0	ID=cds-CYJ03_RS10880;Parent=gene-CYJ03_RS10880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ03_RS10880;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,6005;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	6459	7481	.	-	.	ID=gene-CYJ03_RS10885;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10885;old_locus_tag=CYJ03_010875
NZ_PJUP02000036.1	Protein Homology	CDS	6459	7481	.	-	0	ID=cds-WP_065354124.1;Parent=gene-CYJ03_RS10885;Dbxref=GenBank:WP_065354124.1;Name=WP_065354124.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=CYJ03_RS10885;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_065354124.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	7474	7944	.	-	.	ID=gene-CYJ03_RS10890;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CYJ03_RS10890;old_locus_tag=CYJ03_010880
NZ_PJUP02000036.1	Protein Homology	CDS	7474	7944	.	-	0	ID=cds-WP_014613398.1;Parent=gene-CYJ03_RS10890;Dbxref=GenBank:WP_014613398.1;Name=WP_014613398.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613398.1;locus_tag=CYJ03_RS10890;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_014613398.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	7923	8579	.	-	.	ID=gene-CYJ03_RS10895;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10895;old_locus_tag=CYJ03_010885
NZ_PJUP02000036.1	Protein Homology	CDS	7923	8579	.	-	0	ID=cds-WP_063278594.1;Parent=gene-CYJ03_RS10895;Dbxref=GenBank:WP_063278594.1;Name=WP_063278594.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729420.1;locus_tag=CYJ03_RS10895;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_063278594.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	8560	9018	.	-	.	ID=gene-CYJ03_RS10900;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CYJ03_RS10900;old_locus_tag=CYJ03_010890
NZ_PJUP02000036.1	Protein Homology	CDS	8560	9018	.	-	0	ID=cds-WP_014613396.1;Parent=gene-CYJ03_RS10900;Dbxref=GenBank:WP_014613396.1;Name=WP_014613396.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167544.1;locus_tag=CYJ03_RS10900;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014613396.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	9562	11250	.	+	.	ID=gene-CYJ03_RS10905;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10905;old_locus_tag=CYJ03_010895
NZ_PJUP02000036.1	Protein Homology	CDS	9562	11250	.	+	0	ID=cds-WP_104052357.1;Parent=gene-CYJ03_RS10905;Dbxref=GenBank:WP_104052357.1;Name=WP_104052357.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=CYJ03_RS10905;product=dihydroxy-acid dehydratase;protein_id=WP_104052357.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	11271	13025	.	+	.	ID=gene-CYJ03_RS10910;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10910;old_locus_tag=CYJ03_010900
NZ_PJUP02000036.1	Protein Homology	CDS	11271	13025	.	+	0	ID=cds-WP_014613394.1;Parent=gene-CYJ03_RS10910;Dbxref=GenBank:WP_014613394.1;Name=WP_014613394.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167542.1;locus_tag=CYJ03_RS10910;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_014613394.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	13022	13495	.	+	.	ID=gene-CYJ03_RS10915;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CYJ03_RS10915;old_locus_tag=CYJ03_010905
NZ_PJUP02000036.1	Protein Homology	CDS	13022	13495	.	+	0	ID=cds-WP_014613393.1;Parent=gene-CYJ03_RS10915;Dbxref=GenBank:WP_014613393.1;Name=WP_014613393.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=CYJ03_RS10915;product=acetolactate synthase small subunit;protein_id=WP_014613393.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	13530	14534	.	+	.	ID=gene-CYJ03_RS10920;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10920;old_locus_tag=CYJ03_010910
NZ_PJUP02000036.1	Protein Homology	CDS	13530	14534	.	+	0	ID=cds-WP_063278596.1;Parent=gene-CYJ03_RS10920;Dbxref=GenBank:WP_063278596.1;Name=WP_063278596.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=CYJ03_RS10920;product=ketol-acid reductoisomerase;protein_id=WP_063278596.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	14556	16088	.	+	.	ID=gene-CYJ03_RS10925;Name=CYJ03_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10925;old_locus_tag=CYJ03_010915
NZ_PJUP02000036.1	Protein Homology	CDS	14556	16088	.	+	0	ID=cds-WP_096536083.1;Parent=gene-CYJ03_RS10925;Dbxref=GenBank:WP_096536083.1;Name=WP_096536083.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167540.1;locus_tag=CYJ03_RS10925;product=2-isopropylmalate synthase;protein_id=WP_096536083.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	16085	17134	.	+	.	ID=gene-CYJ03_RS10930;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10930;old_locus_tag=CYJ03_010920
NZ_PJUP02000036.1	Protein Homology	CDS	16085	17134	.	+	0	ID=cds-WP_101457537.1;Parent=gene-CYJ03_RS10930;Dbxref=GenBank:WP_101457537.1;Name=WP_101457537.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=CYJ03_RS10930;product=3-isopropylmalate dehydrogenase;protein_id=WP_101457537.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	17138	18511	.	+	.	ID=gene-CYJ03_RS10935;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10935;old_locus_tag=CYJ03_010925
NZ_PJUP02000036.1	Protein Homology	CDS	17138	18511	.	+	0	ID=cds-WP_014613389.1;Parent=gene-CYJ03_RS10935;Dbxref=GenBank:WP_014613389.1;Name=WP_014613389.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613389.1;locus_tag=CYJ03_RS10935;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_014613389.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	18511	19083	.	+	.	ID=gene-CYJ03_RS10940;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10940;old_locus_tag=CYJ03_010930
NZ_PJUP02000036.1	Protein Homology	CDS	18511	19083	.	+	0	ID=cds-WP_014613388.1;Parent=gene-CYJ03_RS10940;Dbxref=GenBank:WP_014613388.1;Name=WP_014613388.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167537.1;locus_tag=CYJ03_RS10940;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_014613388.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	19096	20364	.	+	.	ID=gene-CYJ03_RS10945;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10945;old_locus_tag=CYJ03_010935
NZ_PJUP02000036.1	Protein Homology	CDS	19096	20364	.	+	0	ID=cds-WP_014613387.1;Parent=gene-CYJ03_RS10945;Dbxref=GenBank:WP_014613387.1;Name=WP_014613387.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CYJ03_RS10945;product=threonine ammonia-lyase IlvA;protein_id=WP_014613387.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	20434	21594	.	-	.	ID=gene-CYJ03_RS10950;Name=CYJ03_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10950;old_locus_tag=CYJ03_010940
NZ_PJUP02000036.1	Protein Homology	CDS	20434	21594	.	-	0	ID=cds-WP_131087450.1;Parent=gene-CYJ03_RS10950;Dbxref=GenBank:WP_131087450.1;Name=WP_131087450.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613386.1;locus_tag=CYJ03_RS10950;product=MFS transporter;protein_id=WP_131087450.1;transl_table=11
NZ_PJUP02000036.1	RefSeq	gene	22003	22117	.	-	.	ID=gene-CYJ03_RS10955;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ03_RS10955;old_locus_tag=CYJ03_010945
NZ_PJUP02000036.1	cmsearch	rRNA	22003	22117	.	-	.	ID=rna-CYJ03_RS10955;Parent=gene-CYJ03_RS10955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10955;product=5S ribosomal RNA
NZ_PJUP02000036.1	cmsearch	exon	22003	22117	.	-	.	ID=exon-CYJ03_RS10955-1;Parent=rna-CYJ03_RS10955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10955;product=5S ribosomal RNA
NZ_PJUP02000036.1	RefSeq	gene	22196	25117	.	-	.	ID=gene-CYJ03_RS10960;Name=CYJ03_RS10960;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS10960;old_locus_tag=CYJ03_010950
NZ_PJUP02000036.1	cmsearch	rRNA	22196	25117	.	-	.	ID=rna-CYJ03_RS10960;Parent=gene-CYJ03_RS10960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10960;product=23S ribosomal RNA
NZ_PJUP02000036.1	cmsearch	exon	22196	25117	.	-	.	ID=exon-CYJ03_RS10960-1;Parent=rna-CYJ03_RS10960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10960;product=23S ribosomal RNA
NZ_PJUP02000036.1	RefSeq	gene	25418	25493	.	-	.	ID=gene-CYJ03_RS10965;Name=CYJ03_RS10965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS10965;old_locus_tag=CYJ03_010955
NZ_PJUP02000036.1	tRNAscan-SE	tRNA	25418	25493	.	-	.	ID=rna-CYJ03_RS10965;Parent=gene-CYJ03_RS10965;anticodon=(pos:complement(25458..25460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10965;product=tRNA-Ala
NZ_PJUP02000036.1	tRNAscan-SE	exon	25418	25493	.	-	.	ID=exon-CYJ03_RS10965-1;Parent=rna-CYJ03_RS10965;anticodon=(pos:complement(25458..25460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10965;product=tRNA-Ala
NZ_PJUP02000036.1	RefSeq	gene	25516	25592	.	-	.	ID=gene-CYJ03_RS10970;Name=CYJ03_RS10970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS10970;old_locus_tag=CYJ03_010960
NZ_PJUP02000036.1	tRNAscan-SE	tRNA	25516	25592	.	-	.	ID=rna-CYJ03_RS10970;Parent=gene-CYJ03_RS10970;anticodon=(pos:complement(25556..25558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10970;product=tRNA-Ile
NZ_PJUP02000036.1	tRNAscan-SE	exon	25516	25592	.	-	.	ID=exon-CYJ03_RS10970-1;Parent=rna-CYJ03_RS10970;anticodon=(pos:complement(25556..25558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10970;product=tRNA-Ile
NZ_PJUP02000036.1	cmsearch	sequence_feature	25684	26078	.	-	.	ID=id-NZ_PJUP02000036.1:25684..26078;Dbxref=RFAM:RF00177;Note=mutual gap in cmsearch alignment for this rRNA model is longer than 100;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000036.1	RefSeq	sequence_feature	25835	25968	.	+	.	ID=id-NZ_PJUP02000036.1:25835..25968;Note=16S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
##sequence-region NZ_PJUP02000019.1 1 47655
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000019.1	RefSeq	region	1	47655	.	+	.	ID=NZ_PJUP02000019.1:1..47655;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000019.1	RefSeq	pseudogene	188	925	.	-	.	ID=gene-CYJ03_RS07695;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=CYJ03_RS07695;old_locus_tag=CYJ03_007685;partial=true;pseudo=true;start_range=.,188
NZ_PJUP02000019.1	Protein Homology	CDS	188	925	.	-	0	ID=cds-CYJ03_RS07695;Parent=gene-CYJ03_RS07695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500284.1;locus_tag=CYJ03_RS07695;partial=true;product=trigger factor;pseudo=true;start_range=.,188;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	1013	1936	.	-	.	ID=gene-CYJ03_RS07700;Name=CYJ03_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07700;old_locus_tag=CYJ03_007690
NZ_PJUP02000019.1	Protein Homology	CDS	1013	1936	.	-	0	ID=cds-WP_014613697.1;Parent=gene-CYJ03_RS07700;Dbxref=GenBank:WP_014613697.1;Name=WP_014613697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729287.1;locus_tag=CYJ03_RS07700;product=hypothetical protein;protein_id=WP_014613697.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	1946	2557	.	-	.	ID=gene-CYJ03_RS07705;Name=CYJ03_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07705;old_locus_tag=CYJ03_007695
NZ_PJUP02000019.1	Protein Homology	CDS	1946	2557	.	-	0	ID=cds-WP_014613696.1;Parent=gene-CYJ03_RS07705;Dbxref=GenBank:WP_014613696.1;Name=WP_014613696.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169473.1;locus_tag=CYJ03_RS07705;product=NUDIX domain-containing protein;protein_id=WP_014613696.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	2667	3023	.	-	.	ID=gene-CYJ03_RS07710;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CYJ03_RS07710;old_locus_tag=CYJ03_007700
NZ_PJUP02000019.1	Protein Homology	CDS	2667	3023	.	-	0	ID=cds-WP_014613695.1;Parent=gene-CYJ03_RS07710;Dbxref=GenBank:WP_014613695.1;Name=WP_014613695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=CYJ03_RS07710;product=50S ribosomal protein L20;protein_id=WP_014613695.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	3098	3298	.	-	.	ID=gene-CYJ03_RS07715;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CYJ03_RS07715;old_locus_tag=CYJ03_007705
NZ_PJUP02000019.1	Protein Homology	CDS	3098	3298	.	-	0	ID=cds-WP_014613694.1;Parent=gene-CYJ03_RS07715;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CYJ03_RS07715;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	3324	3851	.	-	.	ID=gene-CYJ03_RS07720;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CYJ03_RS07720;old_locus_tag=CYJ03_007710
NZ_PJUP02000019.1	Protein Homology	CDS	3324	3851	.	-	0	ID=cds-WP_014613693.1;Parent=gene-CYJ03_RS07720;Dbxref=GenBank:WP_014613693.1;Name=WP_014613693.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=CYJ03_RS07720;product=translation initiation factor IF-3;protein_id=WP_014613693.1;transl_table=11
NZ_PJUP02000019.1	cmsearch	sequence_feature	3876	4012	.	-	.	ID=id-NZ_PJUP02000019.1:3876..4012;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00558,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000019.1	RefSeq	gene	3900	4037	.	-	.	ID=gene-CYJ03_RS12305;Name=CYJ03_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12305
NZ_PJUP02000019.1	Protein Homology	CDS	3900	4037	.	-	0	ID=cds-WP_014613692.1;Parent=gene-CYJ03_RS12305;Dbxref=GenBank:WP_014613692.1;Name=WP_014613692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613692.1;locus_tag=CYJ03_RS12305;product=hypothetical protein;protein_id=WP_014613692.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	4054	5562	.	-	.	ID=gene-CYJ03_RS07725;Name=CYJ03_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07725;old_locus_tag=CYJ03_007715
NZ_PJUP02000019.1	Protein Homology	CDS	4054	5562	.	-	0	ID=cds-WP_014613691.1;Parent=gene-CYJ03_RS07725;Dbxref=GenBank:WP_014613691.1;Name=WP_014613691.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613691.1;locus_tag=CYJ03_RS07725;product=amino acid permease;protein_id=WP_014613691.1;transl_table=11
NZ_PJUP02000019.1	cmsearch	riboswitch	5698	5869	.	-	.	ID=id-NZ_PJUP02000019.1:5698..5869;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000019.1	RefSeq	gene	5930	7867	.	-	.	ID=gene-CYJ03_RS07730;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07730;old_locus_tag=CYJ03_007720
NZ_PJUP02000019.1	Protein Homology	CDS	5930	7867	.	-	0	ID=cds-WP_099986522.1;Parent=gene-CYJ03_RS07730;Dbxref=GenBank:WP_099986522.1;Name=WP_099986522.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=CYJ03_RS07730;product=threonine--tRNA ligase;protein_id=WP_099986522.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	8185	9108	.	-	.	ID=gene-CYJ03_RS07735;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=CYJ03_RS07735;old_locus_tag=CYJ03_007725
NZ_PJUP02000019.1	Protein Homology	CDS	8185	9108	.	-	0	ID=cds-WP_014613689.1;Parent=gene-CYJ03_RS07735;Dbxref=GenBank:WP_014613689.1;Name=WP_014613689.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670575.1;locus_tag=CYJ03_RS07735;product=primosomal protein DnaI;protein_id=WP_014613689.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	9108	10481	.	-	.	ID=gene-CYJ03_RS07740;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS07740;old_locus_tag=CYJ03_007730
NZ_PJUP02000019.1	Protein Homology	CDS	9108	10481	.	-	0	ID=cds-WP_096533285.1;Parent=gene-CYJ03_RS07740;Dbxref=GenBank:WP_096533285.1;Name=WP_096533285.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=CYJ03_RS07740;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_096533285.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	10485	10952	.	-	.	ID=gene-CYJ03_RS07745;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CYJ03_RS07745;old_locus_tag=CYJ03_007735
NZ_PJUP02000019.1	Protein Homology	CDS	10485	10952	.	-	0	ID=cds-WP_014613687.1;Parent=gene-CYJ03_RS07745;Dbxref=GenBank:WP_014613687.1;Name=WP_014613687.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=CYJ03_RS07745;product=transcriptional regulator NrdR;protein_id=WP_014613687.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	11149	12165	.	-	.	ID=gene-CYJ03_RS07750;Name=CYJ03_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07750;old_locus_tag=CYJ03_007740
NZ_PJUP02000019.1	Protein Homology	CDS	11149	12165	.	-	0	ID=cds-WP_037542830.1;Parent=gene-CYJ03_RS07750;Dbxref=GenBank:WP_037542830.1;Name=WP_037542830.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=CYJ03_RS07750;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037542830.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	12372	12995	.	-	.	ID=gene-CYJ03_RS07755;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CYJ03_RS07755;old_locus_tag=CYJ03_007745
NZ_PJUP02000019.1	Protein Homology	CDS	12372	12995	.	-	0	ID=cds-WP_014613685.1;Parent=gene-CYJ03_RS07755;Dbxref=GenBank:WP_014613685.1;Name=WP_014613685.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613685.1;locus_tag=CYJ03_RS07755;product=dephospho-CoA kinase;protein_id=WP_014613685.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	13009	13881	.	-	.	ID=gene-CYJ03_RS07760;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CYJ03_RS07760;old_locus_tag=CYJ03_007750
NZ_PJUP02000019.1	Protein Homology	CDS	13009	13881	.	-	0	ID=cds-WP_014613684.1;Parent=gene-CYJ03_RS07760;Dbxref=GenBank:WP_014613684.1;Name=WP_014613684.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=CYJ03_RS07760;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_014613684.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	13901	16528	.	-	.	ID=gene-CYJ03_RS07765;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07765;old_locus_tag=CYJ03_007755
NZ_PJUP02000019.1	Protein Homology	CDS	13901	16528	.	-	0	ID=cds-WP_100007211.1;Parent=gene-CYJ03_RS07765;Dbxref=GenBank:WP_100007211.1;Name=WP_100007211.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=CYJ03_RS07765;product=DNA polymerase I;protein_id=WP_100007211.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	17261	18961	.	-	.	ID=gene-CYJ03_RS07770;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=CYJ03_RS07770;old_locus_tag=CYJ03_007760
NZ_PJUP02000019.1	Protein Homology	CDS	17261	18961	.	-	0	ID=cds-WP_101431337.1;Parent=gene-CYJ03_RS07770;Dbxref=GenBank:WP_101431337.1;Name=WP_101431337.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=CYJ03_RS07770;product=two-component system histidine kinase PnpS;protein_id=WP_101431337.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	18962	19666	.	-	.	ID=gene-CYJ03_RS07775;Name=CYJ03_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07775;old_locus_tag=CYJ03_007765
NZ_PJUP02000019.1	Protein Homology	CDS	18962	19666	.	-	0	ID=cds-WP_014613681.1;Parent=gene-CYJ03_RS07775;Dbxref=GenBank:WP_014613681.1;Name=WP_014613681.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=CYJ03_RS07775;product=response regulator transcription factor;protein_id=WP_014613681.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	19985	21277	.	-	.	ID=gene-CYJ03_RS07780;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CYJ03_RS07780;old_locus_tag=CYJ03_007770
NZ_PJUP02000019.1	Protein Homology	CDS	19985	21277	.	-	0	ID=cds-WP_257784255.1;Parent=gene-CYJ03_RS07780;Dbxref=GenBank:WP_257784255.1;Name=WP_257784255.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=CYJ03_RS07780;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_257784255.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	21293	22411	.	-	.	ID=gene-CYJ03_RS07785;Name=CYJ03_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07785;old_locus_tag=CYJ03_007775
NZ_PJUP02000019.1	Protein Homology	CDS	21293	22411	.	-	0	ID=cds-WP_014613679.1;Parent=gene-CYJ03_RS07785;Dbxref=GenBank:WP_014613679.1;Name=WP_014613679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453430.1;locus_tag=CYJ03_RS07785;product=citrate synthase;protein_id=WP_014613679.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	22835	24595	.	-	.	ID=gene-CYJ03_RS07790;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CYJ03_RS07790;old_locus_tag=CYJ03_007780
NZ_PJUP02000019.1	Protein Homology	CDS	22835	24595	.	-	0	ID=cds-WP_014613678.1;Parent=gene-CYJ03_RS07790;Dbxref=GenBank:WP_014613678.1;Name=WP_014613678.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=CYJ03_RS07790;product=pyruvate kinase;protein_id=WP_014613678.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	24614	25582	.	-	.	ID=gene-CYJ03_RS07795;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07795;old_locus_tag=CYJ03_007785
NZ_PJUP02000019.1	Protein Homology	CDS	24614	25582	.	-	0	ID=cds-WP_014613677.1;Parent=gene-CYJ03_RS07795;Dbxref=GenBank:WP_014613677.1;Name=WP_014613677.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=CYJ03_RS07795;product=6-phosphofructokinase;protein_id=WP_014613677.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	26146	27090	.	-	.	ID=gene-CYJ03_RS07800;Name=CYJ03_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07800;old_locus_tag=CYJ03_007790
NZ_PJUP02000019.1	Protein Homology	CDS	26146	27090	.	-	0	ID=cds-WP_096547995.1;Parent=gene-CYJ03_RS07800;Dbxref=GenBank:WP_096547995.1;Name=WP_096547995.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=CYJ03_RS07800;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_096547995.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	27090	27950	.	-	.	ID=gene-CYJ03_RS07805;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CYJ03_RS07805;old_locus_tag=CYJ03_007795
NZ_PJUP02000019.1	Protein Homology	CDS	27090	27950	.	-	0	ID=cds-WP_014613675.1;Parent=gene-CYJ03_RS07805;Dbxref=GenBank:WP_014613675.1;Name=WP_014613675.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500314.1;locus_tag=CYJ03_RS07805;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_014613675.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	27995	29227	.	-	.	ID=gene-CYJ03_RS07810;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=CYJ03_RS07810;old_locus_tag=CYJ03_007800
NZ_PJUP02000019.1	Protein Homology	CDS	27995	29227	.	-	0	ID=cds-WP_014613674.1;Parent=gene-CYJ03_RS07810;Dbxref=GenBank:WP_014613674.1;Name=WP_014613674.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613674.1;locus_tag=CYJ03_RS07810;product=NADP-dependent malic enzyme;protein_id=WP_014613674.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	29370	32561	.	-	.	ID=gene-CYJ03_RS07815;Name=CYJ03_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07815;old_locus_tag=CYJ03_007805
NZ_PJUP02000019.1	Protein Homology	CDS	29370	32561	.	-	0	ID=cds-WP_101431336.1;Parent=gene-CYJ03_RS07815;Dbxref=GenBank:WP_101431336.1;Name=WP_101431336.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=CYJ03_RS07815;product=DNA polymerase III subunit alpha;protein_id=WP_101431336.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	32586	33518	.	-	.	ID=gene-CYJ03_RS07820;Name=CYJ03_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07820;old_locus_tag=CYJ03_007810
NZ_PJUP02000019.1	Protein Homology	CDS	32586	33518	.	-	0	ID=cds-WP_037542826.1;Parent=gene-CYJ03_RS07820;Dbxref=GenBank:WP_037542826.1;Name=WP_037542826.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613672.1;locus_tag=CYJ03_RS07820;product=DHH family phosphoesterase;protein_id=WP_037542826.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	33531	34826	.	-	.	ID=gene-CYJ03_RS07825;Name=CYJ03_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07825;old_locus_tag=CYJ03_007815
NZ_PJUP02000019.1	Protein Homology	CDS	33531	34826	.	-	0	ID=cds-WP_014613671.1;Parent=gene-CYJ03_RS07825;Dbxref=GenBank:WP_014613671.1;Name=WP_014613671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=CYJ03_RS07825;product=DRTGG domain-containing protein;protein_id=WP_014613671.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	35147	35560	.	+	.	ID=gene-CYJ03_RS07830;Name=CYJ03_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07830;old_locus_tag=CYJ03_007820
NZ_PJUP02000019.1	Protein Homology	CDS	35147	35560	.	+	0	ID=cds-WP_101431335.1;Parent=gene-CYJ03_RS07830;Dbxref=GenBank:WP_101431335.1;Name=WP_101431335.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=CYJ03_RS07830;product=universal stress protein;protein_id=WP_101431335.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	36174	36863	.	-	.	ID=gene-CYJ03_RS07835;Name=CYJ03_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07835;old_locus_tag=CYJ03_007825
NZ_PJUP02000019.1	Protein Homology	CDS	36174	36863	.	-	0	ID=cds-WP_014613669.1;Parent=gene-CYJ03_RS07835;Dbxref=GenBank:WP_014613669.1;Name=WP_014613669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613669.1;locus_tag=CYJ03_RS07835;product=metal-dependent hydrolase;protein_id=WP_014613669.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	37120	38175	.	+	.	ID=gene-CYJ03_RS07840;Name=CYJ03_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07840;old_locus_tag=CYJ03_007830
NZ_PJUP02000019.1	Protein Homology	CDS	37120	38175	.	+	0	ID=cds-WP_014613668.1;Parent=gene-CYJ03_RS07840;Dbxref=GenBank:WP_014613668.1;Name=WP_014613668.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=CYJ03_RS07840;product=M24 family metallopeptidase;protein_id=WP_014613668.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	38172	38807	.	+	.	ID=gene-CYJ03_RS07845;Name=CYJ03_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07845;old_locus_tag=CYJ03_007835
NZ_PJUP02000019.1	Protein Homology	CDS	38172	38807	.	+	0	ID=cds-WP_101431334.1;Parent=gene-CYJ03_RS07845;Dbxref=GenBank:WP_101431334.1;Name=WP_101431334.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220142.1;locus_tag=CYJ03_RS07845;product=copper homeostasis protein CutC;protein_id=WP_101431334.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	38900	40021	.	-	.	ID=gene-CYJ03_RS07850;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CYJ03_RS07850;old_locus_tag=CYJ03_007840
NZ_PJUP02000019.1	Protein Homology	CDS	38900	40021	.	-	0	ID=cds-WP_014613666.1;Parent=gene-CYJ03_RS07850;Dbxref=GenBank:WP_014613666.1;Name=WP_014613666.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613666.1;locus_tag=CYJ03_RS07850;product=alanine dehydrogenase;protein_id=WP_014613666.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	40169	40672	.	+	.	ID=gene-CYJ03_RS07855;Name=CYJ03_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07855;old_locus_tag=CYJ03_007845
NZ_PJUP02000019.1	Protein Homology	CDS	40169	40672	.	+	0	ID=cds-WP_014613665.1;Parent=gene-CYJ03_RS07855;Dbxref=GenBank:WP_014613665.1;Name=WP_014613665.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=CYJ03_RS07855;product=universal stress protein;protein_id=WP_014613665.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	40932	42134	.	-	.	ID=gene-CYJ03_RS07860;Name=CYJ03_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07860;old_locus_tag=CYJ03_007850
NZ_PJUP02000019.1	Protein Homology	CDS	40932	42134	.	-	0	ID=cds-WP_015729302.1;Parent=gene-CYJ03_RS07860;Dbxref=GenBank:WP_015729302.1;Name=WP_015729302.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729302.1;locus_tag=CYJ03_RS07860;product=acetate kinase;protein_id=WP_015729302.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	42213	43160	.	-	.	ID=gene-CYJ03_RS07865;Name=CYJ03_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07865;old_locus_tag=CYJ03_007855
NZ_PJUP02000019.1	Protein Homology	CDS	42213	43160	.	-	0	ID=cds-WP_041613222.1;Parent=gene-CYJ03_RS07865;Dbxref=GenBank:WP_041613222.1;Name=WP_041613222.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722135.1;locus_tag=CYJ03_RS07865;product=class I SAM-dependent methyltransferase;protein_id=WP_041613222.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	43368	43862	.	-	.	ID=gene-CYJ03_RS07870;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CYJ03_RS07870;old_locus_tag=CYJ03_007860
NZ_PJUP02000019.1	Protein Homology	CDS	43368	43862	.	-	0	ID=cds-WP_014613662.1;Parent=gene-CYJ03_RS07870;Dbxref=GenBank:WP_014613662.1;Name=WP_014613662.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446674.1;locus_tag=CYJ03_RS07870;product=thiol peroxidase;protein_id=WP_014613662.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	43926	44510	.	-	.	ID=gene-CYJ03_RS07875;Name=CYJ03_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07875;old_locus_tag=CYJ03_007865
NZ_PJUP02000019.1	Protein Homology	CDS	43926	44510	.	-	0	ID=cds-WP_014613661.1;Parent=gene-CYJ03_RS07875;Dbxref=GenBank:WP_014613661.1;Name=WP_014613661.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613661.1;locus_tag=CYJ03_RS07875;product=RDD family protein;protein_id=WP_014613661.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	44520	45512	.	-	.	ID=gene-CYJ03_RS07880;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CYJ03_RS07880;old_locus_tag=CYJ03_007870
NZ_PJUP02000019.1	Protein Homology	CDS	44520	45512	.	-	0	ID=cds-WP_100006547.1;Parent=gene-CYJ03_RS07880;Dbxref=GenBank:WP_100006547.1;Name=WP_100006547.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613660.1;locus_tag=CYJ03_RS07880;product=signal peptide peptidase SppA;protein_id=WP_100006547.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	gene	45670	46443	.	-	.	ID=gene-CYJ03_RS07885;Name=CYJ03_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS07885;old_locus_tag=CYJ03_007875
NZ_PJUP02000019.1	Protein Homology	CDS	45670	46443	.	-	0	ID=cds-WP_014613659.1;Parent=gene-CYJ03_RS07885;Dbxref=GenBank:WP_014613659.1;Name=WP_014613659.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613659.1;locus_tag=CYJ03_RS07885;product=TSUP family transporter;protein_id=WP_014613659.1;transl_table=11
NZ_PJUP02000019.1	RefSeq	pseudogene	46459	47622	.	-	.	ID=gene-CYJ03_RS07890;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=pseudogene;locus_tag=CYJ03_RS07890;old_locus_tag=CYJ03_007880;pseudo=true
NZ_PJUP02000019.1	Protein Homology	CDS	46459	47622	.	-	0	ID=cds-CYJ03_RS07890;Parent=gene-CYJ03_RS07890;Note=too many ambiguous residues;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165374.1;locus_tag=CYJ03_RS07890;product=tRNA uracil 4-sulfurtransferase ThiI;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000025.1 1 40393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000025.1	RefSeq	region	1	40393	.	+	.	ID=NZ_PJUP02000025.1:1..40393;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000025.1	RefSeq	pseudogene	1	302	.	+	.	ID=gene-CYJ03_RS09090;Name=CYJ03_RS09090;end_range=302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS09090;old_locus_tag=CYJ03_009080;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000025.1	Protein Homology	CDS	1	302	.	+	2	ID=cds-CYJ03_RS09090;Parent=gene-CYJ03_RS09090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001798866.1;locus_tag=CYJ03_RS09090;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000025.1	RefSeq	pseudogene	390	536	.	+	.	ID=gene-CYJ03_RS09100;Name=eno;gbkey=Gene;gene=eno;gene_biotype=pseudogene;locus_tag=CYJ03_RS09100;old_locus_tag=CYJ03_009090;partial=true;pseudo=true;start_range=.,390
NZ_PJUP02000025.1	Protein Homology	CDS	390	536	.	+	0	ID=cds-CYJ03_RS09100;Parent=gene-CYJ03_RS09100;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CYJ03_RS09100;partial=true;product=phosphopyruvate hydratase;pseudo=true;start_range=.,390;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	1061	2050	.	+	.	ID=gene-CYJ03_RS09105;Name=CYJ03_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09105;old_locus_tag=CYJ03_009095
NZ_PJUP02000025.1	Protein Homology	CDS	1061	2050	.	+	0	ID=cds-WP_075773699.1;Parent=gene-CYJ03_RS09105;Dbxref=GenBank:WP_075773699.1;Name=WP_075773699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044870.3;locus_tag=CYJ03_RS09105;product=YncE family protein;protein_id=WP_075773699.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	3242	4444	.	+	.	ID=gene-CYJ03_RS09115;Name=CYJ03_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09115;old_locus_tag=CYJ03_009105
NZ_PJUP02000025.1	Protein Homology	CDS	3242	4444	.	+	0	ID=cds-WP_104052315.1;Parent=gene-CYJ03_RS09115;Dbxref=GenBank:WP_104052315.1;Name=WP_104052315.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ03_RS09115;product=MFS transporter;protein_id=WP_104052315.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	4967	5152	.	+	.	ID=gene-CYJ03_RS12320;Name=CYJ03_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12320;old_locus_tag=CYJ03_009110
NZ_PJUP02000025.1	GeneMarkS-2+	CDS	4967	5152	.	+	0	ID=cds-WP_110179633.1;Parent=gene-CYJ03_RS12320;Dbxref=GenBank:WP_110179633.1;Name=WP_110179633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12320;product=hypothetical protein;protein_id=WP_110179633.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	5267	5734	.	+	.	ID=gene-CYJ03_RS09125;Name=CYJ03_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09125;old_locus_tag=CYJ03_009115
NZ_PJUP02000025.1	Protein Homology	CDS	5267	5734	.	+	0	ID=cds-WP_014614478.1;Parent=gene-CYJ03_RS09125;Dbxref=GenBank:WP_014614478.1;Name=WP_014614478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=CYJ03_RS09125;product=hypothetical protein;protein_id=WP_014614478.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	5803	6036	.	+	.	ID=gene-CYJ03_RS09130;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CYJ03_RS09130;old_locus_tag=CYJ03_009120
NZ_PJUP02000025.1	Protein Homology	CDS	5803	6036	.	+	0	ID=cds-WP_014614477.1;Parent=gene-CYJ03_RS09130;Dbxref=GenBank:WP_014614477.1;Name=WP_014614477.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=CYJ03_RS09130;product=preprotein translocase subunit SecG;protein_id=WP_014614477.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	6135	6875	.	+	.	ID=gene-CYJ03_RS09135;Name=CYJ03_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09135;old_locus_tag=CYJ03_009125
NZ_PJUP02000025.1	Protein Homology	CDS	6135	6875	.	+	0	ID=cds-WP_014614476.1;Parent=gene-CYJ03_RS09135;Dbxref=GenBank:WP_014614476.1;Name=WP_014614476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=CYJ03_RS09135;product=alpha/beta hydrolase;protein_id=WP_014614476.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	6930	9287	.	+	.	ID=gene-CYJ03_RS09140;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CYJ03_RS09140;old_locus_tag=CYJ03_009130
NZ_PJUP02000025.1	Protein Homology	CDS	6930	9287	.	+	0	ID=cds-WP_101457807.1;Parent=gene-CYJ03_RS09140;Dbxref=GenBank:WP_101457807.1;Name=WP_101457807.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CYJ03_RS09140;product=ribonuclease R;protein_id=WP_101457807.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	9303	9767	.	+	.	ID=gene-CYJ03_RS09145;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09145;old_locus_tag=CYJ03_009135
NZ_PJUP02000025.1	Protein Homology	CDS	9303	9767	.	+	0	ID=cds-WP_014614474.1;Parent=gene-CYJ03_RS09145;Dbxref=GenBank:WP_014614474.1;Name=WP_014614474.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=CYJ03_RS09145;product=SsrA-binding protein SmpB;protein_id=WP_014614474.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	9841	10200	.	+	.	ID=gene-CYJ03_RS09150;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CYJ03_RS09150;old_locus_tag=CYJ03_009140
NZ_PJUP02000025.1	cmsearch	tmRNA	9841	10200	.	+	.	ID=rna-CYJ03_RS09150;Parent=gene-CYJ03_RS09150;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS09150;product=transfer-messenger RNA
NZ_PJUP02000025.1	cmsearch	exon	9841	10200	.	+	.	ID=exon-CYJ03_RS09150-1;Parent=rna-CYJ03_RS09150;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS09150;product=transfer-messenger RNA
NZ_PJUP02000025.1	RefSeq	gene	10664	11458	.	+	.	ID=gene-CYJ03_RS09155;Name=CYJ03_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09155;old_locus_tag=CYJ03_009145
NZ_PJUP02000025.1	Protein Homology	CDS	10664	11458	.	+	0	ID=cds-WP_065354460.1;Parent=gene-CYJ03_RS09155;Dbxref=GenBank:WP_065354460.1;Name=WP_065354460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614473.1;locus_tag=CYJ03_RS09155;product=exotoxin;protein_id=WP_065354460.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	11652	12443	.	-	.	ID=gene-CYJ03_RS09160;Name=CYJ03_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09160;old_locus_tag=CYJ03_009150
NZ_PJUP02000025.1	Protein Homology	CDS	11652	12443	.	-	0	ID=cds-WP_096548087.1;Parent=gene-CYJ03_RS09160;Dbxref=GenBank:WP_096548087.1;Name=WP_096548087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670134.1;locus_tag=CYJ03_RS09160;product=DUF1828 domain-containing protein;protein_id=WP_096548087.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	12448	12840	.	-	.	ID=gene-CYJ03_RS12865;Name=CYJ03_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12865;old_locus_tag=CYJ03_009155
NZ_PJUP02000025.1	Protein Homology	CDS	12448	12840	.	-	0	ID=cds-WP_373408328.1;Parent=gene-CYJ03_RS12865;Dbxref=GenBank:WP_373408328.1;Name=WP_373408328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046260.3;locus_tag=CYJ03_RS12865;product=DUF6978 family protein;protein_id=WP_373408328.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	13511	14734	.	+	.	ID=gene-CYJ03_RS09170;Name=CYJ03_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09170;old_locus_tag=CYJ03_009160
NZ_PJUP02000025.1	Protein Homology	CDS	13511	14734	.	+	0	ID=cds-WP_014614465.1;Parent=gene-CYJ03_RS09170;Dbxref=GenBank:WP_014614465.1;Name=WP_014614465.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728783.1;locus_tag=CYJ03_RS09170;product=serine hydrolase domain-containing protein;protein_id=WP_014614465.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	14791	15162	.	-	.	ID=gene-CYJ03_RS09175;Name=CYJ03_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09175;old_locus_tag=CYJ03_009165
NZ_PJUP02000025.1	Protein Homology	CDS	14791	15162	.	-	0	ID=cds-WP_014614464.1;Parent=gene-CYJ03_RS09175;Dbxref=GenBank:WP_014614464.1;Name=WP_014614464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=CYJ03_RS09175;product=DUF1722 domain-containing protein;protein_id=WP_014614464.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	15173	15661	.	-	.	ID=gene-CYJ03_RS09180;Name=CYJ03_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09180;old_locus_tag=CYJ03_009170
NZ_PJUP02000025.1	Protein Homology	CDS	15173	15661	.	-	0	ID=cds-WP_014614463.1;Parent=gene-CYJ03_RS09180;Dbxref=GenBank:WP_014614463.1;Name=WP_014614463.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614463.1;locus_tag=CYJ03_RS09180;product=GNAT family N-acetyltransferase;protein_id=WP_014614463.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	16084	16503	.	-	.	ID=gene-CYJ03_RS09185;Name=CYJ03_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09185;old_locus_tag=CYJ03_009175
NZ_PJUP02000025.1	Protein Homology	CDS	16084	16503	.	-	0	ID=cds-WP_031253630.1;Parent=gene-CYJ03_RS09185;Dbxref=GenBank:WP_031253630.1;Name=WP_031253630.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637484.1;locus_tag=CYJ03_RS09185;product=Ohr family peroxiredoxin;protein_id=WP_031253630.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	16652	17656	.	+	.	ID=gene-CYJ03_RS09190;Name=CYJ03_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09190;old_locus_tag=CYJ03_009180
NZ_PJUP02000025.1	Protein Homology	CDS	16652	17656	.	+	0	ID=cds-WP_104052316.1;Parent=gene-CYJ03_RS09190;Dbxref=GenBank:WP_104052316.1;Name=WP_104052316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614461.1;locus_tag=CYJ03_RS09190;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_104052316.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	17677	18402	.	+	.	ID=gene-CYJ03_RS09195;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09195;old_locus_tag=CYJ03_009185
NZ_PJUP02000025.1	Protein Homology	CDS	17677	18402	.	+	0	ID=cds-WP_014614460.1;Parent=gene-CYJ03_RS09195;Dbxref=GenBank:WP_014614460.1;Name=WP_014614460.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=CYJ03_RS09195;product=type I 3-dehydroquinate dehydratase;protein_id=WP_014614460.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	18457	19002	.	+	.	ID=gene-CYJ03_RS09200;Name=CYJ03_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09200;old_locus_tag=CYJ03_009190
NZ_PJUP02000025.1	Protein Homology	CDS	18457	19002	.	+	0	ID=cds-WP_014614459.1;Parent=gene-CYJ03_RS09200;Dbxref=GenBank:WP_014614459.1;Name=WP_014614459.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614459.1;locus_tag=CYJ03_RS09200;product=nitroreductase family protein;protein_id=WP_014614459.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	19132	19452	.	-	.	ID=gene-CYJ03_RS09205;Name=CYJ03_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09205;old_locus_tag=CYJ03_009195
NZ_PJUP02000025.1	Protein Homology	CDS	19132	19452	.	-	0	ID=cds-WP_014614458.1;Parent=gene-CYJ03_RS09205;Dbxref=GenBank:WP_014614458.1;Name=WP_014614458.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168947.1;locus_tag=CYJ03_RS09205;product=thioredoxin family protein;protein_id=WP_014614458.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	19736	20092	.	+	.	ID=gene-CYJ03_RS09210;Name=CYJ03_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09210;old_locus_tag=CYJ03_009200
NZ_PJUP02000025.1	Protein Homology	CDS	19736	20092	.	+	0	ID=cds-WP_031253623.1;Parent=gene-CYJ03_RS09210;Dbxref=GenBank:WP_031253623.1;Name=WP_031253623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479305.1;locus_tag=CYJ03_RS09210;product=arsenate reductase family protein;protein_id=WP_031253623.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	20166	20546	.	+	.	ID=gene-CYJ03_RS09215;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CYJ03_RS09215;old_locus_tag=CYJ03_009205
NZ_PJUP02000025.1	Protein Homology	CDS	20166	20546	.	+	0	ID=cds-WP_014614456.1;Parent=gene-CYJ03_RS09215;Dbxref=GenBank:WP_014614456.1;Name=WP_014614456.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499390.1;locus_tag=CYJ03_RS09215;product=glycine cleavage system protein GcvH;protein_id=WP_014614456.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	20625	21020	.	+	.	ID=gene-CYJ03_RS09220;Name=CYJ03_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09220;old_locus_tag=CYJ03_009210
NZ_PJUP02000025.1	Protein Homology	CDS	20625	21020	.	+	0	ID=cds-WP_014614455.1;Parent=gene-CYJ03_RS09220;Dbxref=GenBank:WP_014614455.1;Name=WP_014614455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=CYJ03_RS09220;product=toprim domain-containing protein;protein_id=WP_014614455.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	20986	21303	.	+	.	ID=gene-CYJ03_RS09225;Name=CYJ03_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09225;old_locus_tag=CYJ03_009215
NZ_PJUP02000025.1	Protein Homology	CDS	20986	21303	.	+	0	ID=cds-WP_101457493.1;Parent=gene-CYJ03_RS09225;Dbxref=GenBank:WP_101457493.1;Name=WP_101457493.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=CYJ03_RS09225;product=thioredoxin family protein;protein_id=WP_101457493.1;transl_table=11
NZ_PJUP02000025.1	cmsearch	riboswitch	21341	21450	.	+	.	ID=id-NZ_PJUP02000025.1:21341..21450;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000025.1	RefSeq	gene	21546	22574	.	+	.	ID=gene-CYJ03_RS09230;Name=CYJ03_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09230;old_locus_tag=CYJ03_009220
NZ_PJUP02000025.1	Protein Homology	CDS	21546	22574	.	+	0	ID=cds-WP_101457492.1;Parent=gene-CYJ03_RS09230;Dbxref=GenBank:WP_101457492.1;Name=WP_101457492.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276311.1;locus_tag=CYJ03_RS09230;product=methionine ABC transporter ATP-binding protein;protein_id=WP_101457492.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	22567	23262	.	+	.	ID=gene-CYJ03_RS09235;Name=CYJ03_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09235;old_locus_tag=CYJ03_009225
NZ_PJUP02000025.1	Protein Homology	CDS	22567	23262	.	+	0	ID=cds-WP_063284816.1;Parent=gene-CYJ03_RS09235;Dbxref=GenBank:WP_063284816.1;Name=WP_063284816.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CYJ03_RS09235;product=methionine ABC transporter permease;protein_id=WP_063284816.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	23282	24103	.	+	.	ID=gene-CYJ03_RS09240;Name=CYJ03_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09240;old_locus_tag=CYJ03_009230
NZ_PJUP02000025.1	Protein Homology	CDS	23282	24103	.	+	0	ID=cds-WP_014614450.1;Parent=gene-CYJ03_RS09240;Dbxref=GenBank:WP_014614450.1;Name=WP_014614450.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276309.1;locus_tag=CYJ03_RS09240;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014614450.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	24232	25050	.	+	.	ID=gene-CYJ03_RS09245;Name=CYJ03_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09245;old_locus_tag=CYJ03_009235
NZ_PJUP02000025.1	Protein Homology	CDS	24232	25050	.	+	0	ID=cds-WP_020219509.1;Parent=gene-CYJ03_RS09245;Dbxref=GenBank:WP_020219509.1;Name=WP_020219509.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614449.1;locus_tag=CYJ03_RS09245;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_020219509.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	25347	26207	.	-	.	ID=gene-CYJ03_RS09250;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=CYJ03_RS09250;old_locus_tag=CYJ03_009240
NZ_PJUP02000025.1	Protein Homology	CDS	25347	26207	.	-	0	ID=cds-WP_101457491.1;Parent=gene-CYJ03_RS09250;Dbxref=GenBank:WP_101457491.1;Name=WP_101457491.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614448.1;locus_tag=CYJ03_RS09250;product=polyprenyl-phosphate transporter PopT;protein_id=WP_101457491.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	26505	27275	.	+	.	ID=gene-CYJ03_RS09255;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09255;old_locus_tag=CYJ03_009245
NZ_PJUP02000025.1	Protein Homology	CDS	26505	27275	.	+	0	ID=cds-WP_014614447.1;Parent=gene-CYJ03_RS09255;Dbxref=GenBank:WP_014614447.1;Name=WP_014614447.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=CYJ03_RS09255;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_014614447.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	27297	28604	.	+	.	ID=gene-CYJ03_RS09260;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09260;old_locus_tag=CYJ03_009250
NZ_PJUP02000025.1	Protein Homology	CDS	27297	28604	.	+	0	ID=cds-WP_063278560.1;Parent=gene-CYJ03_RS09260;Dbxref=GenBank:WP_063278560.1;Name=WP_063278560.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=CYJ03_RS09260;product=Fe-S cluster assembly protein SufD;protein_id=WP_063278560.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	28633	29874	.	+	.	ID=gene-CYJ03_RS09265;Name=CYJ03_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09265;old_locus_tag=CYJ03_009255
NZ_PJUP02000025.1	Protein Homology	CDS	28633	29874	.	+	0	ID=cds-WP_104052317.1;Parent=gene-CYJ03_RS09265;Dbxref=GenBank:WP_104052317.1;Name=WP_104052317.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533341.1;locus_tag=CYJ03_RS09265;product=cysteine desulfurase;protein_id=WP_104052317.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	29864	30313	.	+	.	ID=gene-CYJ03_RS09270;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=CYJ03_RS09270;old_locus_tag=CYJ03_009260
NZ_PJUP02000025.1	Protein Homology	CDS	29864	30313	.	+	0	ID=cds-WP_101457490.1;Parent=gene-CYJ03_RS09270;Dbxref=GenBank:WP_101457490.1;Name=WP_101457490.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=CYJ03_RS09270;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_101457490.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	30411	31808	.	+	.	ID=gene-CYJ03_RS09275;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09275;old_locus_tag=CYJ03_009265
NZ_PJUP02000025.1	Protein Homology	CDS	30411	31808	.	+	0	ID=cds-WP_014614443.1;Parent=gene-CYJ03_RS09275;Dbxref=GenBank:WP_014614443.1;Name=WP_014614443.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CYJ03_RS09275;product=Fe-S cluster assembly protein SufB;protein_id=WP_014614443.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	31954	32238	.	+	.	ID=gene-CYJ03_RS09280;Name=CYJ03_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09280;old_locus_tag=CYJ03_009270
NZ_PJUP02000025.1	Protein Homology	CDS	31954	32238	.	+	0	ID=cds-WP_015728852.1;Parent=gene-CYJ03_RS09280;Dbxref=GenBank:WP_015728852.1;Name=WP_015728852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728852.1;locus_tag=CYJ03_RS09280;product=type 1 glutamine amidotransferase family protein;protein_id=WP_015728852.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	32528	33526	.	+	.	ID=gene-CYJ03_RS09285;Name=CYJ03_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09285;old_locus_tag=CYJ03_009275
NZ_PJUP02000025.1	Protein Homology	CDS	32528	33526	.	+	0	ID=cds-WP_014614441.1;Parent=gene-CYJ03_RS09285;Dbxref=GenBank:WP_014614441.1;Name=WP_014614441.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=CYJ03_RS09285;product=hemolysin family protein;protein_id=WP_014614441.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	33608	33772	.	+	.	ID=gene-CYJ03_RS12645;Name=CYJ03_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12645
NZ_PJUP02000025.1	GeneMarkS-2+	CDS	33608	33772	.	+	0	ID=cds-WP_187530585.1;Parent=gene-CYJ03_RS12645;Dbxref=GenBank:WP_187530585.1;Name=WP_187530585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12645;product=nitronate monooxygenase;protein_id=WP_187530585.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	33827	34129	.	+	.	ID=gene-CYJ03_RS12650;Name=CYJ03_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12650
NZ_PJUP02000025.1	Protein Homology	CDS	33827	34129	.	+	0	ID=cds-WP_258058112.1;Parent=gene-CYJ03_RS12650;Dbxref=GenBank:WP_258058112.1;Name=WP_258058112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015047.7;locus_tag=CYJ03_RS12650;product=nitronate monooxygenase;protein_id=WP_258058112.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	34590	35297	.	-	.	ID=gene-CYJ03_RS09295;Name=CYJ03_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09295;old_locus_tag=CYJ03_009285
NZ_PJUP02000025.1	Protein Homology	CDS	34590	35297	.	-	0	ID=cds-WP_096533199.1;Parent=gene-CYJ03_RS09295;Dbxref=GenBank:WP_096533199.1;Name=WP_096533199.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219503.1;locus_tag=CYJ03_RS09295;product=alpha/beta hydrolase family protein;protein_id=WP_096533199.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	35421	36269	.	+	.	ID=gene-CYJ03_RS09300;Name=CYJ03_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09300;old_locus_tag=CYJ03_009290
NZ_PJUP02000025.1	Protein Homology	CDS	35421	36269	.	+	0	ID=cds-WP_014614438.1;Parent=gene-CYJ03_RS09300;Dbxref=GenBank:WP_014614438.1;Name=WP_014614438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=CYJ03_RS09300;product=DUF72 domain-containing protein;protein_id=WP_014614438.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	36278	37108	.	+	.	ID=gene-CYJ03_RS09305;Name=CYJ03_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09305;old_locus_tag=CYJ03_009295
NZ_PJUP02000025.1	Protein Homology	CDS	36278	37108	.	+	0	ID=cds-WP_041613273.1;Parent=gene-CYJ03_RS09305;Dbxref=GenBank:WP_041613273.1;Name=WP_041613273.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956137.1;locus_tag=CYJ03_RS09305;product=sulfite exporter TauE/SafE family protein;protein_id=WP_041613273.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	37125	38444	.	+	.	ID=gene-CYJ03_RS09310;Name=CYJ03_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09310;old_locus_tag=CYJ03_009300
NZ_PJUP02000025.1	Protein Homology	CDS	37125	38444	.	+	0	ID=cds-WP_014614436.1;Parent=gene-CYJ03_RS09310;Dbxref=GenBank:WP_014614436.1;Name=WP_014614436.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728857.1;locus_tag=CYJ03_RS09310;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_014614436.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	38530	39447	.	+	.	ID=gene-CYJ03_RS09315;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09315;old_locus_tag=CYJ03_009305
NZ_PJUP02000025.1	Protein Homology	CDS	38530	39447	.	+	0	ID=cds-WP_014614435.1;Parent=gene-CYJ03_RS09315;Dbxref=GenBank:WP_014614435.1;Name=WP_014614435.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614435.1;locus_tag=CYJ03_RS09315;product=lipoyl synthase;protein_id=WP_014614435.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	39466	39831	.	+	.	ID=gene-CYJ03_RS09320;Name=CYJ03_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09320;old_locus_tag=CYJ03_009310
NZ_PJUP02000025.1	Protein Homology	CDS	39466	39831	.	+	0	ID=cds-WP_014614434.1;Parent=gene-CYJ03_RS09320;Dbxref=GenBank:WP_014614434.1;Name=WP_014614434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=CYJ03_RS09320;product=YutD family protein;protein_id=WP_014614434.1;transl_table=11
NZ_PJUP02000025.1	RefSeq	gene	40166	40303	.	-	.	ID=gene-CYJ03_RS09325;Name=CYJ03_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09325;old_locus_tag=CYJ03_009315
NZ_PJUP02000025.1	GeneMarkS-2+	CDS	40166	40303	.	-	0	ID=cds-WP_181137784.1;Parent=gene-CYJ03_RS09325;Dbxref=GenBank:WP_181137784.1;Name=WP_181137784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS09325;product=VOC family protein;protein_id=WP_181137784.1;transl_table=11
##sequence-region NZ_PJUP02000022.1 1 40773
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000022.1	RefSeq	region	1	40773	.	+	.	ID=NZ_PJUP02000022.1:1..40773;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000022.1	RefSeq	gene	354	1568	.	-	.	ID=gene-CYJ03_RS08335;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=CYJ03_RS08335;old_locus_tag=CYJ03_008325
NZ_PJUP02000022.1	Protein Homology	CDS	354	1568	.	-	0	ID=cds-WP_014613555.1;Parent=gene-CYJ03_RS08335;Dbxref=GenBank:WP_014613555.1;Name=WP_014613555.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=CYJ03_RS08335;product=ABC transporter permease EcsB;protein_id=WP_014613555.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	1565	2302	.	-	.	ID=gene-CYJ03_RS08340;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08340;old_locus_tag=CYJ03_008330
NZ_PJUP02000022.1	Protein Homology	CDS	1565	2302	.	-	0	ID=cds-WP_014613554.1;Parent=gene-CYJ03_RS08340;Dbxref=GenBank:WP_014613554.1;Name=WP_014613554.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168023.1;locus_tag=CYJ03_RS08340;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_014613554.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	2438	2863	.	+	.	ID=gene-CYJ03_RS08345;Name=CYJ03_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08345;old_locus_tag=CYJ03_008335
NZ_PJUP02000022.1	Protein Homology	CDS	2438	2863	.	+	0	ID=cds-WP_063279146.1;Parent=gene-CYJ03_RS08345;Dbxref=GenBank:WP_063279146.1;Name=WP_063279146.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=CYJ03_RS08345;product=HIT family protein;protein_id=WP_063279146.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	2941	3297	.	+	.	ID=gene-CYJ03_RS08350;Name=CYJ03_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08350;old_locus_tag=CYJ03_008340
NZ_PJUP02000022.1	Protein Homology	CDS	2941	3297	.	+	0	ID=cds-WP_014613552.1;Parent=gene-CYJ03_RS08350;Dbxref=GenBank:WP_014613552.1;Name=WP_014613552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=CYJ03_RS08350;product=YtxH domain-containing protein;protein_id=WP_014613552.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	3399	3929	.	+	.	ID=gene-CYJ03_RS08355;Name=CYJ03_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08355;old_locus_tag=CYJ03_008345
NZ_PJUP02000022.1	Protein Homology	CDS	3399	3929	.	+	0	ID=cds-WP_096548917.1;Parent=gene-CYJ03_RS08355;Dbxref=GenBank:WP_096548917.1;Name=WP_096548917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=CYJ03_RS08355;product=HTH-type transcriptional regulator Hpr;protein_id=WP_096548917.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	3978	4544	.	+	.	ID=gene-CYJ03_RS08360;Name=CYJ03_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08360;old_locus_tag=CYJ03_008350
NZ_PJUP02000022.1	Protein Homology	CDS	3978	4544	.	+	0	ID=cds-WP_015729361.1;Parent=gene-CYJ03_RS08360;Dbxref=GenBank:WP_015729361.1;Name=WP_015729361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729361.1;locus_tag=CYJ03_RS08360;product=DUF3267 domain-containing protein;protein_id=WP_015729361.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	pseudogene	4865	5041	.	+	.	ID=gene-CYJ03_RS12640;Name=CYJ03_RS12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12640;partial=true;pseudo=true;start_range=.,4865
NZ_PJUP02000022.1	Protein Homology	CDS	4865	5041	.	+	0	ID=cds-CYJ03_RS12640;Parent=gene-CYJ03_RS12640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.7;locus_tag=CYJ03_RS12640;partial=true;product=MFS transporter;pseudo=true;start_range=.,4865;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	5225	6181	.	+	.	ID=gene-CYJ03_RS08365;Name=CYJ03_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08365;old_locus_tag=CYJ03_008355
NZ_PJUP02000022.1	Protein Homology	CDS	5225	6181	.	+	0	ID=cds-WP_014613548.1;Parent=gene-CYJ03_RS08365;Dbxref=GenBank:WP_014613548.1;Name=WP_014613548.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168017.1;locus_tag=CYJ03_RS08365;product=peptidylprolyl isomerase;protein_id=WP_014613548.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	6391	7332	.	-	.	ID=gene-CYJ03_RS08370;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=CYJ03_RS08370;old_locus_tag=CYJ03_008360
NZ_PJUP02000022.1	Protein Homology	CDS	6391	7332	.	-	0	ID=cds-WP_014613547.1;Parent=gene-CYJ03_RS08370;Dbxref=GenBank:WP_014613547.1;Name=WP_014613547.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CYJ03_RS08370;product=3'-5' exoribonuclease YhaM;protein_id=WP_014613547.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	7351	10275	.	-	.	ID=gene-CYJ03_RS08375;Name=CYJ03_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08375;old_locus_tag=CYJ03_008365
NZ_PJUP02000022.1	Protein Homology	CDS	7351	10275	.	-	0	ID=cds-WP_101431646.1;Parent=gene-CYJ03_RS08375;Dbxref=GenBank:WP_101431646.1;Name=WP_101431646.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=CYJ03_RS08375;product=AAA family ATPase;protein_id=WP_101431646.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	10279	11466	.	-	.	ID=gene-CYJ03_RS08380;Name=CYJ03_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08380;old_locus_tag=CYJ03_008370
NZ_PJUP02000022.1	Protein Homology	CDS	10279	11466	.	-	0	ID=cds-WP_014613545.1;Parent=gene-CYJ03_RS08380;Dbxref=GenBank:WP_014613545.1;Name=WP_014613545.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=CYJ03_RS08380;product=metallophosphoesterase family protein;protein_id=WP_014613545.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	11720	12064	.	-	.	ID=gene-CYJ03_RS08385;Name=CYJ03_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08385;old_locus_tag=CYJ03_008375
NZ_PJUP02000022.1	Protein Homology	CDS	11720	12064	.	-	0	ID=cds-WP_014613544.1;Parent=gene-CYJ03_RS08385;Dbxref=GenBank:WP_014613544.1;Name=WP_014613544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CYJ03_RS08385;product=YlbF/YmcA family competence regulator;protein_id=WP_014613544.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	12153	13283	.	-	.	ID=gene-CYJ03_RS08390;Name=CYJ03_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08390;old_locus_tag=CYJ03_008380
NZ_PJUP02000022.1	Protein Homology	CDS	12153	13283	.	-	0	ID=cds-WP_104052297.1;Parent=gene-CYJ03_RS08390;Dbxref=GenBank:WP_104052297.1;Name=WP_104052297.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168012.1;locus_tag=CYJ03_RS08390;product=DUF445 domain-containing protein;protein_id=WP_104052297.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	13508	13972	.	-	.	ID=gene-CYJ03_RS08395;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS08395;old_locus_tag=CYJ03_008385
NZ_PJUP02000022.1	Protein Homology	CDS	13508	13972	.	-	0	ID=cds-WP_014613542.1;Parent=gene-CYJ03_RS08395;Dbxref=GenBank:WP_014613542.1;Name=WP_014613542.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=CYJ03_RS08395;product=XRE family transcriptional regulator XdrA;protein_id=WP_014613542.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	15480	16766	.	-	.	ID=gene-CYJ03_RS08405;Name=CYJ03_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08405;old_locus_tag=CYJ03_008395
NZ_PJUP02000022.1	Protein Homology	CDS	15480	16766	.	-	0	ID=cds-WP_104052298.1;Parent=gene-CYJ03_RS08405;Dbxref=GenBank:WP_104052298.1;Name=WP_104052298.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=CYJ03_RS08405;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_104052298.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	16962	17843	.	+	.	ID=gene-CYJ03_RS08410;Name=CYJ03_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08410;old_locus_tag=CYJ03_008400
NZ_PJUP02000022.1	Protein Homology	CDS	16962	17843	.	+	0	ID=cds-WP_015729363.1;Parent=gene-CYJ03_RS08410;Dbxref=GenBank:WP_015729363.1;Name=WP_015729363.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729363.1;locus_tag=CYJ03_RS08410;product=cation diffusion facilitator family transporter;protein_id=WP_015729363.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	17912	18538	.	-	.	ID=gene-CYJ03_RS08415;Name=CYJ03_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08415;old_locus_tag=CYJ03_008405
NZ_PJUP02000022.1	Protein Homology	CDS	17912	18538	.	-	0	ID=cds-WP_015729364.1;Parent=gene-CYJ03_RS08415;Dbxref=GenBank:WP_015729364.1;Name=WP_015729364.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729364.1;locus_tag=CYJ03_RS08415;product=response regulator;protein_id=WP_015729364.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	18538	19662	.	-	.	ID=gene-CYJ03_RS08420;Name=CYJ03_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08420;old_locus_tag=CYJ03_008410
NZ_PJUP02000022.1	Protein Homology	CDS	18538	19662	.	-	0	ID=cds-WP_015729365.1;Parent=gene-CYJ03_RS08420;Dbxref=GenBank:WP_015729365.1;Name=WP_015729365.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729365.1;locus_tag=CYJ03_RS08420;product=GAF domain-containing sensor histidine kinase;protein_id=WP_015729365.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	19816	20646	.	+	.	ID=gene-CYJ03_RS08425;Name=CYJ03_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08425;old_locus_tag=CYJ03_008415
NZ_PJUP02000022.1	Protein Homology	CDS	19816	20646	.	+	0	ID=cds-WP_015729366.1;Parent=gene-CYJ03_RS08425;Dbxref=GenBank:WP_015729366.1;Name=WP_015729366.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=CYJ03_RS08425;product=RluA family pseudouridine synthase;protein_id=WP_015729366.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	20714	22876	.	-	.	ID=gene-CYJ03_RS08430;Name=CYJ03_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08430;old_locus_tag=CYJ03_008420
NZ_PJUP02000022.1	Protein Homology	CDS	20714	22876	.	-	0	ID=cds-WP_373408325.1;Parent=gene-CYJ03_RS08430;Dbxref=GenBank:WP_373408325.1;Name=WP_373408325.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425465.1;locus_tag=CYJ03_RS08430;product=RNA degradosome polyphosphate kinase;protein_id=WP_373408325.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	22958	24484	.	-	.	ID=gene-CYJ03_RS08435;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CYJ03_RS08435;old_locus_tag=CYJ03_008425
NZ_PJUP02000022.1	Protein Homology	CDS	22958	24484	.	-	0	ID=cds-WP_101485203.1;Parent=gene-CYJ03_RS08435;Dbxref=GenBank:WP_101485203.1;Name=WP_101485203.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613535.1;locus_tag=CYJ03_RS08435;product=exopolyphosphatase;protein_id=WP_101485203.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	24505	25890	.	-	.	ID=gene-CYJ03_RS08440;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CYJ03_RS08440;old_locus_tag=CYJ03_008430
NZ_PJUP02000022.1	Protein Homology	CDS	24505	25890	.	-	0	ID=cds-WP_014613534.1;Parent=gene-CYJ03_RS08440;Dbxref=GenBank:WP_014613534.1;Name=WP_014613534.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CYJ03_RS08440;product=class II fumarate hydratase;protein_id=WP_014613534.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	26120	26563	.	-	.	ID=gene-CYJ03_RS08445;Name=CYJ03_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08445;old_locus_tag=CYJ03_008435
NZ_PJUP02000022.1	Protein Homology	CDS	26120	26563	.	-	0	ID=cds-WP_104052300.1;Parent=gene-CYJ03_RS08445;Dbxref=GenBank:WP_104052300.1;Name=WP_104052300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164970.1;locus_tag=CYJ03_RS08445;product=hypothetical protein;protein_id=WP_104052300.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	26684	26845	.	-	.	ID=gene-CYJ03_RS12315;Name=CYJ03_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12315
NZ_PJUP02000022.1	Protein Homology	CDS	26684	26845	.	-	0	ID=cds-WP_014613532.1;Parent=gene-CYJ03_RS12315;Dbxref=GenBank:WP_014613532.1;Name=WP_014613532.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=CYJ03_RS12315;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_014613532.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	26866	27465	.	-	.	ID=gene-CYJ03_RS08450;Name=CYJ03_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08450;old_locus_tag=CYJ03_008440
NZ_PJUP02000022.1	Protein Homology	CDS	26866	27465	.	-	0	ID=cds-WP_014613531.1;Parent=gene-CYJ03_RS08450;Dbxref=GenBank:WP_014613531.1;Name=WP_014613531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167999.1;locus_tag=CYJ03_RS08450;product=6-phosphogluconolactonase;protein_id=WP_014613531.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	27658	28128	.	-	.	ID=gene-CYJ03_RS08455;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CYJ03_RS08455;old_locus_tag=CYJ03_008445
NZ_PJUP02000022.1	Protein Homology	CDS	27658	28128	.	-	0	ID=cds-WP_014613530.1;Parent=gene-CYJ03_RS08455;Dbxref=GenBank:WP_014613530.1;Name=WP_014613530.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=CYJ03_RS08455;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014613530.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	28128	29258	.	-	.	ID=gene-CYJ03_RS08460;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CYJ03_RS08460;old_locus_tag=CYJ03_008450
NZ_PJUP02000022.1	Protein Homology	CDS	28128	29258	.	-	0	ID=cds-WP_015729368.1;Parent=gene-CYJ03_RS08460;Dbxref=GenBank:WP_015729368.1;Name=WP_015729368.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613529.1;locus_tag=CYJ03_RS08460;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_015729368.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	29414	30139	.	-	.	ID=gene-CYJ03_RS08465;Name=CYJ03_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08465;old_locus_tag=CYJ03_008455
NZ_PJUP02000022.1	Protein Homology	CDS	29414	30139	.	-	0	ID=cds-WP_015729369.1;Parent=gene-CYJ03_RS08465;Dbxref=GenBank:WP_015729369.1;Name=WP_015729369.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613528.1;locus_tag=CYJ03_RS08465;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_015729369.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	30132	31592	.	-	.	ID=gene-CYJ03_RS08470;Name=CYJ03_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08470;old_locus_tag=CYJ03_008460
NZ_PJUP02000022.1	Protein Homology	CDS	30132	31592	.	-	0	ID=cds-WP_070407784.1;Parent=gene-CYJ03_RS08470;Dbxref=GenBank:WP_070407784.1;Name=WP_070407784.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470402.1;locus_tag=CYJ03_RS08470;product=ABC transporter substrate-binding protein/permease;protein_id=WP_070407784.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	31778	32836	.	-	.	ID=gene-CYJ03_RS08475;Name=CYJ03_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08475;old_locus_tag=CYJ03_008465
NZ_PJUP02000022.1	Protein Homology	CDS	31778	32836	.	-	0	ID=cds-WP_014613526.1;Parent=gene-CYJ03_RS08475;Dbxref=GenBank:WP_014613526.1;Name=WP_014613526.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613526.1;locus_tag=CYJ03_RS08475;product=PTS sugar transporter subunit IIC;protein_id=WP_014613526.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	33432	33515	.	-	.	ID=gene-CYJ03_RS08480;Name=CYJ03_RS08480;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08480;old_locus_tag=CYJ03_008470
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	33432	33515	.	-	.	ID=rna-CYJ03_RS08480;Parent=gene-CYJ03_RS08480;anticodon=(pos:complement(33479..33481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08480;product=tRNA-Leu
NZ_PJUP02000022.1	tRNAscan-SE	exon	33432	33515	.	-	.	ID=exon-CYJ03_RS08480-1;Parent=rna-CYJ03_RS08480;anticodon=(pos:complement(33479..33481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08480;product=tRNA-Leu
NZ_PJUP02000022.1	RefSeq	gene	34148	34471	.	-	.	ID=gene-CYJ03_RS08490;Name=CYJ03_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08490;old_locus_tag=CYJ03_008480
NZ_PJUP02000022.1	Protein Homology	CDS	34148	34471	.	-	0	ID=cds-WP_201800474.1;Parent=gene-CYJ03_RS08490;Dbxref=GenBank:WP_201800474.1;Name=WP_201800474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613525.1;locus_tag=CYJ03_RS08490;product=hypothetical protein;protein_id=WP_201800474.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	34538	34708	.	-	.	ID=gene-CYJ03_RS08495;Name=CYJ03_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08495;old_locus_tag=CYJ03_008485
NZ_PJUP02000022.1	GeneMarkS-2+	CDS	34538	34708	.	-	0	ID=cds-WP_179300498.1;Parent=gene-CYJ03_RS08495;Dbxref=GenBank:WP_179300498.1;Name=WP_179300498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS08495;product=hypothetical protein;protein_id=WP_179300498.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	pseudogene	34828	35751	.	-	.	ID=gene-CYJ03_RS08500;Name=CYJ03_RS08500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS08500;old_locus_tag=CYJ03_008490;pseudo=true
NZ_PJUP02000022.1	Protein Homology	CDS	34828	35751	.	-	0	ID=cds-CYJ03_RS08500;Parent=gene-CYJ03_RS08500;Note=internal stop;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458419.1;locus_tag=CYJ03_RS08500;product=peptidoglycan recognition protein family protein;pseudo=true;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	36291	36482	.	-	.	ID=gene-CYJ03_RS08510;Name=CYJ03_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08510;old_locus_tag=CYJ03_008500
NZ_PJUP02000022.1	Protein Homology	CDS	36291	36482	.	-	0	ID=cds-WP_063279149.1;Parent=gene-CYJ03_RS08510;Dbxref=GenBank:WP_063279149.1;Name=WP_063279149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613521.1;locus_tag=CYJ03_RS08510;product=hypothetical protein;protein_id=WP_063279149.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	36522	36920	.	-	.	ID=gene-CYJ03_RS08515;Name=CYJ03_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08515;old_locus_tag=CYJ03_008505
NZ_PJUP02000022.1	GeneMarkS-2+	CDS	36522	36920	.	-	0	ID=cds-WP_070407783.1;Parent=gene-CYJ03_RS08515;Dbxref=GenBank:WP_070407783.1;Name=WP_070407783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS08515;product=hypothetical protein;protein_id=WP_070407783.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	36932	37462	.	-	.	ID=gene-CYJ03_RS08520;Name=CYJ03_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08520;old_locus_tag=CYJ03_008510
NZ_PJUP02000022.1	Protein Homology	CDS	36932	37462	.	-	0	ID=cds-WP_101431652.1;Parent=gene-CYJ03_RS08520;Dbxref=GenBank:WP_101431652.1;Name=WP_101431652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613519.1;locus_tag=CYJ03_RS08520;product=phage upper tail fiber protein;protein_id=WP_101431652.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	37517	37864	.	-	.	ID=gene-CYJ03_RS08525;Name=CYJ03_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS08525;old_locus_tag=CYJ03_008515
NZ_PJUP02000022.1	Protein Homology	CDS	37517	37864	.	-	0	ID=cds-WP_070407782.1;Parent=gene-CYJ03_RS08525;Dbxref=GenBank:WP_070407782.1;Name=WP_070407782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220229.1;locus_tag=CYJ03_RS08525;product=hypothetical protein;protein_id=WP_070407782.1;transl_table=11
NZ_PJUP02000022.1	RefSeq	gene	38170	38243	.	-	.	ID=gene-CYJ03_RS08530;Name=CYJ03_RS08530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08530;old_locus_tag=CYJ03_008520
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38170	38243	.	-	.	ID=rna-CYJ03_RS08530;Parent=gene-CYJ03_RS08530;anticodon=(pos:complement(38209..38211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08530;product=tRNA-Gly
NZ_PJUP02000022.1	tRNAscan-SE	exon	38170	38243	.	-	.	ID=exon-CYJ03_RS08530-1;Parent=rna-CYJ03_RS08530;anticodon=(pos:complement(38209..38211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08530;product=tRNA-Gly
NZ_PJUP02000022.1	RefSeq	gene	38277	38351	.	-	.	ID=gene-CYJ03_RS08535;Name=CYJ03_RS08535;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08535;old_locus_tag=CYJ03_008525
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38277	38351	.	-	.	ID=rna-CYJ03_RS08535;Parent=gene-CYJ03_RS08535;anticodon=(pos:complement(38316..38318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08535;product=tRNA-Gly
NZ_PJUP02000022.1	tRNAscan-SE	exon	38277	38351	.	-	.	ID=exon-CYJ03_RS08535-1;Parent=rna-CYJ03_RS08535;anticodon=(pos:complement(38316..38318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08535;product=tRNA-Gly
NZ_PJUP02000022.1	RefSeq	gene	38366	38440	.	-	.	ID=gene-CYJ03_RS08540;Name=CYJ03_RS08540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08540;old_locus_tag=CYJ03_008530
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38366	38440	.	-	.	ID=rna-CYJ03_RS08540;Parent=gene-CYJ03_RS08540;anticodon=(pos:complement(38406..38408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08540;product=tRNA-Cys
NZ_PJUP02000022.1	tRNAscan-SE	exon	38366	38440	.	-	.	ID=exon-CYJ03_RS08540-1;Parent=rna-CYJ03_RS08540;anticodon=(pos:complement(38406..38408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08540;product=tRNA-Cys
NZ_PJUP02000022.1	RefSeq	gene	38449	38520	.	-	.	ID=gene-CYJ03_RS08545;Name=CYJ03_RS08545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08545;old_locus_tag=CYJ03_008535
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38449	38520	.	-	.	ID=rna-CYJ03_RS08545;Parent=gene-CYJ03_RS08545;anticodon=(pos:complement(38486..38488));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08545;product=tRNA-Gln
NZ_PJUP02000022.1	tRNAscan-SE	exon	38449	38520	.	-	.	ID=exon-CYJ03_RS08545-1;Parent=rna-CYJ03_RS08545;anticodon=(pos:complement(38486..38488));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08545;product=tRNA-Gln
NZ_PJUP02000022.1	RefSeq	gene	38537	38609	.	-	.	ID=gene-CYJ03_RS08550;Name=CYJ03_RS08550;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08550;old_locus_tag=CYJ03_008540
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38537	38609	.	-	.	ID=rna-CYJ03_RS08550;Parent=gene-CYJ03_RS08550;anticodon=(pos:complement(38574..38576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08550;product=tRNA-His
NZ_PJUP02000022.1	tRNAscan-SE	exon	38537	38609	.	-	.	ID=exon-CYJ03_RS08550-1;Parent=rna-CYJ03_RS08550;anticodon=(pos:complement(38574..38576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08550;product=tRNA-His
NZ_PJUP02000022.1	RefSeq	gene	38612	38685	.	-	.	ID=gene-CYJ03_RS08555;Name=CYJ03_RS08555;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08555;old_locus_tag=CYJ03_008545
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38612	38685	.	-	.	ID=rna-CYJ03_RS08555;Parent=gene-CYJ03_RS08555;anticodon=(pos:complement(38651..38653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08555;product=tRNA-Trp
NZ_PJUP02000022.1	tRNAscan-SE	exon	38612	38685	.	-	.	ID=exon-CYJ03_RS08555-1;Parent=rna-CYJ03_RS08555;anticodon=(pos:complement(38651..38653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08555;product=tRNA-Trp
NZ_PJUP02000022.1	RefSeq	gene	38693	38776	.	-	.	ID=gene-CYJ03_RS08560;Name=CYJ03_RS08560;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08560;old_locus_tag=CYJ03_008550
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38693	38776	.	-	.	ID=rna-CYJ03_RS08560;Parent=gene-CYJ03_RS08560;anticodon=(pos:complement(38740..38742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08560;product=tRNA-Tyr
NZ_PJUP02000022.1	tRNAscan-SE	exon	38693	38776	.	-	.	ID=exon-CYJ03_RS08560-1;Parent=rna-CYJ03_RS08560;anticodon=(pos:complement(38740..38742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08560;product=tRNA-Tyr
NZ_PJUP02000022.1	RefSeq	gene	38783	38858	.	-	.	ID=gene-CYJ03_RS08565;Name=CYJ03_RS08565;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08565;old_locus_tag=CYJ03_008555
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38783	38858	.	-	.	ID=rna-CYJ03_RS08565;Parent=gene-CYJ03_RS08565;anticodon=(pos:complement(38823..38825));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08565;product=tRNA-Thr
NZ_PJUP02000022.1	tRNAscan-SE	exon	38783	38858	.	-	.	ID=exon-CYJ03_RS08565-1;Parent=rna-CYJ03_RS08565;anticodon=(pos:complement(38823..38825));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08565;product=tRNA-Thr
NZ_PJUP02000022.1	RefSeq	gene	38867	38939	.	-	.	ID=gene-CYJ03_RS08570;Name=CYJ03_RS08570;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08570;old_locus_tag=CYJ03_008560
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38867	38939	.	-	.	ID=rna-CYJ03_RS08570;Parent=gene-CYJ03_RS08570;anticodon=(pos:complement(38904..38906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08570;product=tRNA-Phe
NZ_PJUP02000022.1	tRNAscan-SE	exon	38867	38939	.	-	.	ID=exon-CYJ03_RS08570-1;Parent=rna-CYJ03_RS08570;anticodon=(pos:complement(38904..38906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08570;product=tRNA-Phe
NZ_PJUP02000022.1	RefSeq	gene	38950	39026	.	-	.	ID=gene-CYJ03_RS08575;Name=CYJ03_RS08575;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08575;old_locus_tag=CYJ03_008565
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	38950	39026	.	-	.	ID=rna-CYJ03_RS08575;Parent=gene-CYJ03_RS08575;anticodon=(pos:complement(38990..38992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08575;product=tRNA-Asp
NZ_PJUP02000022.1	tRNAscan-SE	exon	38950	39026	.	-	.	ID=exon-CYJ03_RS08575-1;Parent=rna-CYJ03_RS08575;anticodon=(pos:complement(38990..38992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08575;product=tRNA-Asp
NZ_PJUP02000022.1	RefSeq	gene	39041	39114	.	-	.	ID=gene-CYJ03_RS08580;Name=CYJ03_RS08580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08580;old_locus_tag=CYJ03_008570
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39041	39114	.	-	.	ID=rna-CYJ03_RS08580;Parent=gene-CYJ03_RS08580;anticodon=(pos:complement(39078..39080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08580;product=tRNA-Met
NZ_PJUP02000022.1	tRNAscan-SE	exon	39041	39114	.	-	.	ID=exon-CYJ03_RS08580-1;Parent=rna-CYJ03_RS08580;anticodon=(pos:complement(39078..39080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08580;product=tRNA-Met
NZ_PJUP02000022.1	RefSeq	gene	39132	39224	.	-	.	ID=gene-CYJ03_RS08585;Name=CYJ03_RS08585;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08585;old_locus_tag=CYJ03_008575
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39132	39224	.	-	.	ID=rna-CYJ03_RS08585;Parent=gene-CYJ03_RS08585;anticodon=(pos:complement(39186..39188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08585;product=tRNA-Ser
NZ_PJUP02000022.1	tRNAscan-SE	exon	39132	39224	.	-	.	ID=exon-CYJ03_RS08585-1;Parent=rna-CYJ03_RS08585;anticodon=(pos:complement(39186..39188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08585;product=tRNA-Ser
NZ_PJUP02000022.1	RefSeq	gene	39233	39306	.	-	.	ID=gene-CYJ03_RS08590;Name=CYJ03_RS08590;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08590;old_locus_tag=CYJ03_008580
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39233	39306	.	-	.	ID=rna-CYJ03_RS08590;Parent=gene-CYJ03_RS08590;anticodon=(pos:complement(39270..39272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08590;product=tRNA-Ile
NZ_PJUP02000022.1	tRNAscan-SE	exon	39233	39306	.	-	.	ID=exon-CYJ03_RS08590-1;Parent=rna-CYJ03_RS08590;anticodon=(pos:complement(39270..39272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08590;product=tRNA-Ile
NZ_PJUP02000022.1	RefSeq	gene	39332	39405	.	-	.	ID=gene-CYJ03_RS08595;Name=CYJ03_RS08595;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08595;old_locus_tag=CYJ03_008585
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39332	39405	.	-	.	ID=rna-CYJ03_RS08595;Parent=gene-CYJ03_RS08595;anticodon=(pos:complement(39369..39371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08595;product=tRNA-Met
NZ_PJUP02000022.1	tRNAscan-SE	exon	39332	39405	.	-	.	ID=exon-CYJ03_RS08595-1;Parent=rna-CYJ03_RS08595;anticodon=(pos:complement(39369..39371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08595;product=tRNA-Met
NZ_PJUP02000022.1	RefSeq	gene	39436	39511	.	-	.	ID=gene-CYJ03_RS08600;Name=CYJ03_RS08600;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08600;old_locus_tag=CYJ03_008590
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39436	39511	.	-	.	ID=rna-CYJ03_RS08600;Parent=gene-CYJ03_RS08600;anticodon=(pos:complement(39476..39478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08600;product=tRNA-Ala
NZ_PJUP02000022.1	tRNAscan-SE	exon	39436	39511	.	-	.	ID=exon-CYJ03_RS08600-1;Parent=rna-CYJ03_RS08600;anticodon=(pos:complement(39476..39478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08600;product=tRNA-Ala
NZ_PJUP02000022.1	RefSeq	gene	39534	39607	.	-	.	ID=gene-CYJ03_RS08605;Name=CYJ03_RS08605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08605;old_locus_tag=CYJ03_008595
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39534	39607	.	-	.	ID=rna-CYJ03_RS08605;Parent=gene-CYJ03_RS08605;anticodon=(pos:complement(39571..39573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08605;product=tRNA-Pro
NZ_PJUP02000022.1	tRNAscan-SE	exon	39534	39607	.	-	.	ID=exon-CYJ03_RS08605-1;Parent=rna-CYJ03_RS08605;anticodon=(pos:complement(39571..39573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08605;product=tRNA-Pro
NZ_PJUP02000022.1	RefSeq	gene	39621	39694	.	-	.	ID=gene-CYJ03_RS08610;Name=CYJ03_RS08610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08610;old_locus_tag=CYJ03_008600
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39621	39694	.	-	.	ID=rna-CYJ03_RS08610;Parent=gene-CYJ03_RS08610;anticodon=(pos:complement(39658..39660));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08610;product=tRNA-Arg
NZ_PJUP02000022.1	tRNAscan-SE	exon	39621	39694	.	-	.	ID=exon-CYJ03_RS08610-1;Parent=rna-CYJ03_RS08610;anticodon=(pos:complement(39658..39660));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08610;product=tRNA-Arg
NZ_PJUP02000022.1	RefSeq	gene	39712	39800	.	-	.	ID=gene-CYJ03_RS08615;Name=CYJ03_RS08615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08615;old_locus_tag=CYJ03_008605
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39712	39800	.	-	.	ID=rna-CYJ03_RS08615;Parent=gene-CYJ03_RS08615;anticodon=(pos:complement(39764..39766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08615;product=tRNA-Leu
NZ_PJUP02000022.1	tRNAscan-SE	exon	39712	39800	.	-	.	ID=exon-CYJ03_RS08615-1;Parent=rna-CYJ03_RS08615;anticodon=(pos:complement(39764..39766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08615;product=tRNA-Leu
NZ_PJUP02000022.1	RefSeq	gene	39807	39881	.	-	.	ID=gene-CYJ03_RS08620;Name=CYJ03_RS08620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08620;old_locus_tag=CYJ03_008610
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39807	39881	.	-	.	ID=rna-CYJ03_RS08620;Parent=gene-CYJ03_RS08620;anticodon=(pos:complement(39847..39849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08620;product=tRNA-Gly
NZ_PJUP02000022.1	tRNAscan-SE	exon	39807	39881	.	-	.	ID=exon-CYJ03_RS08620-1;Parent=rna-CYJ03_RS08620;anticodon=(pos:complement(39847..39849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08620;product=tRNA-Gly
NZ_PJUP02000022.1	RefSeq	gene	39885	39966	.	-	.	ID=gene-CYJ03_RS08625;Name=CYJ03_RS08625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08625;old_locus_tag=CYJ03_008615
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39885	39966	.	-	.	ID=rna-CYJ03_RS08625;Parent=gene-CYJ03_RS08625;anticodon=(pos:complement(39930..39932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08625;product=tRNA-Leu
NZ_PJUP02000022.1	tRNAscan-SE	exon	39885	39966	.	-	.	ID=exon-CYJ03_RS08625-1;Parent=rna-CYJ03_RS08625;anticodon=(pos:complement(39930..39932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08625;product=tRNA-Leu
NZ_PJUP02000022.1	RefSeq	gene	39971	40043	.	-	.	ID=gene-CYJ03_RS08630;Name=CYJ03_RS08630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08630;old_locus_tag=CYJ03_008620
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	39971	40043	.	-	.	ID=rna-CYJ03_RS08630;Parent=gene-CYJ03_RS08630;anticodon=(pos:complement(40008..40010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08630;product=tRNA-Lys
NZ_PJUP02000022.1	tRNAscan-SE	exon	39971	40043	.	-	.	ID=exon-CYJ03_RS08630-1;Parent=rna-CYJ03_RS08630;anticodon=(pos:complement(40008..40010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08630;product=tRNA-Lys
NZ_PJUP02000022.1	RefSeq	gene	40051	40123	.	-	.	ID=gene-CYJ03_RS08635;Name=CYJ03_RS08635;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08635;old_locus_tag=CYJ03_008625
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	40051	40123	.	-	.	ID=rna-CYJ03_RS08635;Parent=gene-CYJ03_RS08635;anticodon=(pos:complement(40088..40090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08635;product=tRNA-Thr
NZ_PJUP02000022.1	tRNAscan-SE	exon	40051	40123	.	-	.	ID=exon-CYJ03_RS08635-1;Parent=rna-CYJ03_RS08635;anticodon=(pos:complement(40088..40090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08635;product=tRNA-Thr
NZ_PJUP02000022.1	RefSeq	gene	40147	40222	.	-	.	ID=gene-CYJ03_RS08640;Name=CYJ03_RS08640;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS08640;old_locus_tag=CYJ03_008630
NZ_PJUP02000022.1	tRNAscan-SE	tRNA	40147	40222	.	-	.	ID=rna-CYJ03_RS08640;Parent=gene-CYJ03_RS08640;anticodon=(pos:complement(40187..40189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08640;product=tRNA-Val
NZ_PJUP02000022.1	tRNAscan-SE	exon	40147	40222	.	-	.	ID=exon-CYJ03_RS08640-1;Parent=rna-CYJ03_RS08640;anticodon=(pos:complement(40187..40189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS08640;product=tRNA-Val
NZ_PJUP02000022.1	RefSeq	gene	40235	40349	.	-	.	ID=gene-CYJ03_RS08645;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ03_RS08645;old_locus_tag=CYJ03_008635
NZ_PJUP02000022.1	cmsearch	rRNA	40235	40349	.	-	.	ID=rna-CYJ03_RS08645;Parent=gene-CYJ03_RS08645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS08645;product=5S ribosomal RNA
NZ_PJUP02000022.1	cmsearch	exon	40235	40349	.	-	.	ID=exon-CYJ03_RS08645-1;Parent=rna-CYJ03_RS08645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS08645;product=5S ribosomal RNA
NZ_PJUP02000022.1	RefSeq	gene	40431	40773	.	-	.	ID=gene-CYJ03_RS12445;Name=CYJ03_RS12445;end_range=40773,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12445;partial=true
NZ_PJUP02000022.1	cmsearch	rRNA	40431	40773	.	-	.	ID=rna-CYJ03_RS12445;Parent=gene-CYJ03_RS12445;Dbxref=RFAM:RF02541;end_range=40773,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12445;partial=true;product=23S ribosomal RNA
NZ_PJUP02000022.1	cmsearch	exon	40431	40773	.	-	.	ID=exon-CYJ03_RS12445-1;Parent=rna-CYJ03_RS12445;Dbxref=RFAM:RF02541;end_range=40773,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12445;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PJUP02000029.1 1 33069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000029.1	RefSeq	region	1	33069	.	+	.	ID=NZ_PJUP02000029.1:1..33069;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000029.1	RefSeq	pseudogene	81	302	.	-	.	ID=gene-CYJ03_RS09770;Name=CYJ03_RS09770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS09770;old_locus_tag=CYJ03_009760;partial=true;pseudo=true;start_range=.,81
NZ_PJUP02000029.1	Protein Homology	CDS	81	302	.	-	0	ID=cds-CYJ03_RS09770;Parent=gene-CYJ03_RS09770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS09770;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,81;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	850	1509	.	-	.	ID=gene-CYJ03_RS09775;Name=CYJ03_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09775;old_locus_tag=CYJ03_009765
NZ_PJUP02000029.1	Protein Homology	CDS	850	1509	.	-	0	ID=cds-WP_014614257.1;Parent=gene-CYJ03_RS09775;Dbxref=GenBank:WP_014614257.1;Name=WP_014614257.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=CYJ03_RS09775;product=potassium channel family protein;protein_id=WP_014614257.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	1658	2677	.	-	.	ID=gene-CYJ03_RS09780;Name=CYJ03_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09780;old_locus_tag=CYJ03_009770
NZ_PJUP02000029.1	Protein Homology	CDS	1658	2677	.	-	0	ID=cds-WP_014614258.1;Parent=gene-CYJ03_RS09780;Dbxref=GenBank:WP_014614258.1;Name=WP_014614258.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=CYJ03_RS09780;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_014614258.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	2677	4020	.	-	.	ID=gene-CYJ03_RS09785;Name=CYJ03_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09785;old_locus_tag=CYJ03_009775
NZ_PJUP02000029.1	Protein Homology	CDS	2677	4020	.	-	0	ID=cds-WP_014614259.1;Parent=gene-CYJ03_RS09785;Dbxref=GenBank:WP_014614259.1;Name=WP_014614259.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614259.1;locus_tag=CYJ03_RS09785;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014614259.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	4223	4456	.	+	.	ID=gene-CYJ03_RS09790;Name=CYJ03_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09790;old_locus_tag=CYJ03_009780
NZ_PJUP02000029.1	Protein Homology	CDS	4223	4456	.	+	0	ID=cds-WP_014614260.1;Parent=gene-CYJ03_RS09790;Dbxref=GenBank:WP_014614260.1;Name=WP_014614260.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165586.1;locus_tag=CYJ03_RS09790;product=glutaredoxin family protein;protein_id=WP_014614260.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	4633	6354	.	-	.	ID=gene-CYJ03_RS09795;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CYJ03_RS09795;old_locus_tag=CYJ03_009785
NZ_PJUP02000029.1	Protein Homology	CDS	4633	6354	.	-	0	ID=cds-WP_015728953.1;Parent=gene-CYJ03_RS09795;Dbxref=GenBank:WP_015728953.1;Name=WP_015728953.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=CYJ03_RS09795;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_015728953.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	6354	6620	.	-	.	ID=gene-CYJ03_RS09800;Name=CYJ03_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09800;old_locus_tag=CYJ03_009790
NZ_PJUP02000029.1	Protein Homology	CDS	6354	6620	.	-	0	ID=cds-WP_014614262.1;Parent=gene-CYJ03_RS09800;Dbxref=GenBank:WP_014614262.1;Name=WP_014614262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=CYJ03_RS09800;product=phosphocarrier protein HPr;protein_id=WP_014614262.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	6784	7314	.	-	.	ID=gene-CYJ03_RS09805;Name=CYJ03_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09805;old_locus_tag=CYJ03_009795
NZ_PJUP02000029.1	Protein Homology	CDS	6784	7314	.	-	0	ID=cds-WP_014614263.1;Parent=gene-CYJ03_RS09805;Dbxref=GenBank:WP_014614263.1;Name=WP_014614263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=CYJ03_RS09805;product=hypothetical protein;protein_id=WP_014614263.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	7375	8544	.	-	.	ID=gene-CYJ03_RS09810;Name=CYJ03_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09810;old_locus_tag=CYJ03_009800
NZ_PJUP02000029.1	Protein Homology	CDS	7375	8544	.	-	0	ID=cds-WP_014614264.1;Parent=gene-CYJ03_RS09810;Dbxref=GenBank:WP_014614264.1;Name=WP_014614264.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165590.1;locus_tag=CYJ03_RS09810;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_014614264.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	8680	10011	.	-	.	ID=gene-CYJ03_RS09815;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09815;old_locus_tag=CYJ03_009805
NZ_PJUP02000029.1	Protein Homology	CDS	8680	10011	.	-	0	ID=cds-WP_065354424.1;Parent=gene-CYJ03_RS09815;Dbxref=GenBank:WP_065354424.1;Name=WP_065354424.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728950.1;locus_tag=CYJ03_RS09815;product=lipoteichoic acid stability factor AuxA;protein_id=WP_065354424.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	10377	10508	.	+	.	ID=gene-CYJ03_RS12460;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=CYJ03_RS12460
NZ_PJUP02000029.1	Protein Homology	CDS	10377	10508	.	+	0	ID=cds-WP_014614266.1;Parent=gene-CYJ03_RS12460;Dbxref=GenBank:WP_014614266.1;Name=WP_014614266.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=CYJ03_RS12460;product=glycopeptide resistance-associated protein GraF;protein_id=WP_014614266.1;transl_table=11
NZ_PJUP02000029.1	cmsearch	riboswitch	11352	11451	.	+	.	ID=id-NZ_PJUP02000029.1:11352..11451;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000029.1	RefSeq	gene	11576	12151	.	+	.	ID=gene-CYJ03_RS09820;Name=CYJ03_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09820;old_locus_tag=CYJ03_009810
NZ_PJUP02000029.1	Protein Homology	CDS	11576	12151	.	+	0	ID=cds-WP_014614267.1;Parent=gene-CYJ03_RS09820;Dbxref=GenBank:WP_014614267.1;Name=WP_014614267.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033477.1;locus_tag=CYJ03_RS09820;product=ECF transporter S component;protein_id=WP_014614267.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	12164	13567	.	+	.	ID=gene-CYJ03_RS09825;Name=CYJ03_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09825;old_locus_tag=CYJ03_009815
NZ_PJUP02000029.1	Protein Homology	CDS	12164	13567	.	+	0	ID=cds-WP_104052331.1;Parent=gene-CYJ03_RS09825;Dbxref=GenBank:WP_104052331.1;Name=WP_104052331.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=CYJ03_RS09825;product=ABC transporter ATP-binding protein;protein_id=WP_104052331.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	13564	14355	.	+	.	ID=gene-CYJ03_RS09830;Name=CYJ03_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09830;old_locus_tag=CYJ03_009820
NZ_PJUP02000029.1	Protein Homology	CDS	13564	14355	.	+	0	ID=cds-WP_063278785.1;Parent=gene-CYJ03_RS09830;Dbxref=GenBank:WP_063278785.1;Name=WP_063278785.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=CYJ03_RS09830;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_063278785.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	14574	15827	.	-	.	ID=gene-CYJ03_RS09835;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09835;old_locus_tag=CYJ03_009825
NZ_PJUP02000029.1	Protein Homology	CDS	14574	15827	.	-	0	ID=cds-WP_065520578.1;Parent=gene-CYJ03_RS09835;Dbxref=GenBank:WP_065520578.1;Name=WP_065520578.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614270.1;locus_tag=CYJ03_RS09835;product=phosphoribosylamine--glycine ligase;protein_id=WP_065520578.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	15845	17323	.	-	.	ID=gene-CYJ03_RS09840;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CYJ03_RS09840;old_locus_tag=CYJ03_009830
NZ_PJUP02000029.1	Protein Homology	CDS	15845	17323	.	-	0	ID=cds-WP_063284641.1;Parent=gene-CYJ03_RS09840;Dbxref=GenBank:WP_063284641.1;Name=WP_063284641.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=CYJ03_RS09840;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_063284641.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	17340	17906	.	-	.	ID=gene-CYJ03_RS09845;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CYJ03_RS09845;old_locus_tag=CYJ03_009835
NZ_PJUP02000029.1	Protein Homology	CDS	17340	17906	.	-	0	ID=cds-WP_037543346.1;Parent=gene-CYJ03_RS09845;Dbxref=GenBank:WP_037543346.1;Name=WP_037543346.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=CYJ03_RS09845;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037543346.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	17906	18937	.	-	.	ID=gene-CYJ03_RS09850;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CYJ03_RS09850;old_locus_tag=CYJ03_009840
NZ_PJUP02000029.1	Protein Homology	CDS	17906	18937	.	-	0	ID=cds-WP_065354425.1;Parent=gene-CYJ03_RS09850;Dbxref=GenBank:WP_065354425.1;Name=WP_065354425.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276159.1;locus_tag=CYJ03_RS09850;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_065354425.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	18941	20362	.	-	.	ID=gene-CYJ03_RS09855;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CYJ03_RS09855;old_locus_tag=CYJ03_009845
NZ_PJUP02000029.1	Protein Homology	CDS	18941	20362	.	-	0	ID=cds-WP_014614274.1;Parent=gene-CYJ03_RS09855;Dbxref=GenBank:WP_014614274.1;Name=WP_014614274.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=CYJ03_RS09855;product=amidophosphoribosyltransferase;protein_id=WP_014614274.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	20341	22530	.	-	.	ID=gene-CYJ03_RS09860;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CYJ03_RS09860;old_locus_tag=CYJ03_009850
NZ_PJUP02000029.1	Protein Homology	CDS	20341	22530	.	-	0	ID=cds-WP_101431666.1;Parent=gene-CYJ03_RS09860;Dbxref=GenBank:WP_101431666.1;Name=WP_101431666.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=CYJ03_RS09860;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_101431666.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	22523	23194	.	-	.	ID=gene-CYJ03_RS09865;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=CYJ03_RS09865;old_locus_tag=CYJ03_009855
NZ_PJUP02000029.1	Protein Homology	CDS	22523	23194	.	-	0	ID=cds-WP_014614276.1;Parent=gene-CYJ03_RS09865;Dbxref=GenBank:WP_014614276.1;Name=WP_014614276.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167837.1;locus_tag=CYJ03_RS09865;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_014614276.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	23196	23456	.	-	.	ID=gene-CYJ03_RS09870;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=CYJ03_RS09870;old_locus_tag=CYJ03_009860
NZ_PJUP02000029.1	Protein Homology	CDS	23196	23456	.	-	0	ID=cds-WP_014614277.1;Parent=gene-CYJ03_RS09870;Dbxref=GenBank:WP_014614277.1;Name=WP_014614277.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=CYJ03_RS09870;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_014614277.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	23459	24160	.	-	.	ID=gene-CYJ03_RS09875;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09875;old_locus_tag=CYJ03_009865
NZ_PJUP02000029.1	Protein Homology	CDS	23459	24160	.	-	0	ID=cds-WP_014614278.1;Parent=gene-CYJ03_RS09875;Dbxref=GenBank:WP_014614278.1;Name=WP_014614278.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303439.1;locus_tag=CYJ03_RS09875;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014614278.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	24157	25290	.	-	.	ID=gene-CYJ03_RS09880;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CYJ03_RS09880;old_locus_tag=CYJ03_009870
NZ_PJUP02000029.1	Protein Homology	CDS	24157	25290	.	-	0	ID=cds-WP_070407582.1;Parent=gene-CYJ03_RS09880;Dbxref=GenBank:WP_070407582.1;Name=WP_070407582.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728942.1;locus_tag=CYJ03_RS09880;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_070407582.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	25277	25759	.	-	.	ID=gene-CYJ03_RS09885;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CYJ03_RS09885;old_locus_tag=CYJ03_009875
NZ_PJUP02000029.1	Protein Homology	CDS	25277	25759	.	-	0	ID=cds-WP_014614280.1;Parent=gene-CYJ03_RS09885;Dbxref=GenBank:WP_014614280.1;Name=WP_014614280.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=CYJ03_RS09885;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_014614280.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	25969	26826	.	+	.	ID=gene-CYJ03_RS09890;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09890;old_locus_tag=CYJ03_009880
NZ_PJUP02000029.1	Protein Homology	CDS	25969	26826	.	+	0	ID=cds-WP_014614281.1;Parent=gene-CYJ03_RS09890;Dbxref=GenBank:WP_014614281.1;Name=WP_014614281.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=CYJ03_RS09890;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_014614281.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	27136	28281	.	-	.	ID=gene-CYJ03_RS09895;Name=CYJ03_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09895;old_locus_tag=CYJ03_009885
NZ_PJUP02000029.1	Protein Homology	CDS	27136	28281	.	-	0	ID=cds-WP_014614282.1;Parent=gene-CYJ03_RS09895;Dbxref=GenBank:WP_014614282.1;Name=WP_014614282.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=CYJ03_RS09895;product=globin domain-containing protein;protein_id=WP_014614282.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	28509	28844	.	+	.	ID=gene-CYJ03_RS09900;Name=CYJ03_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09900;old_locus_tag=CYJ03_009890
NZ_PJUP02000029.1	Protein Homology	CDS	28509	28844	.	+	0	ID=cds-WP_014614283.1;Parent=gene-CYJ03_RS09900;Dbxref=GenBank:WP_014614283.1;Name=WP_014614283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=CYJ03_RS09900;product=DUF5011 domain-containing protein;protein_id=WP_014614283.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	29345	30445	.	+	.	ID=gene-CYJ03_RS09905;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09905;old_locus_tag=CYJ03_009895
NZ_PJUP02000029.1	Protein Homology	CDS	29345	30445	.	+	0	ID=cds-WP_014614285.1;Parent=gene-CYJ03_RS09905;Dbxref=GenBank:WP_014614285.1;Name=WP_014614285.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614285.1;locus_tag=CYJ03_RS09905;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_014614285.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	30448	32436	.	+	.	ID=gene-CYJ03_RS09910;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09910;old_locus_tag=CYJ03_009900
NZ_PJUP02000029.1	Protein Homology	CDS	30448	32436	.	+	0	ID=cds-WP_031253657.1;Parent=gene-CYJ03_RS09910;Dbxref=GenBank:WP_031253657.1;Name=WP_031253657.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CYJ03_RS09910;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_031253657.1;transl_table=11
NZ_PJUP02000029.1	RefSeq	gene	32426	33007	.	+	.	ID=gene-CYJ03_RS09915;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09915;old_locus_tag=CYJ03_009905
NZ_PJUP02000029.1	Protein Homology	CDS	32426	33007	.	+	0	ID=cds-WP_104052332.1;Parent=gene-CYJ03_RS09915;Dbxref=GenBank:WP_104052332.1;Name=WP_104052332.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CYJ03_RS09915;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_104052332.1;transl_table=11
##sequence-region NZ_PJUP02000033.1 1 32012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000033.1	RefSeq	region	1	32012	.	+	.	ID=NZ_PJUP02000033.1:1..32012;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000033.1	RefSeq	pseudogene	1	254	.	+	.	ID=gene-CYJ03_RS10435;Name=CYJ03_RS10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10435;old_locus_tag=CYJ03_010425;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000033.1	Protein Homology	CDS	1	254	.	+	2	ID=cds-CYJ03_RS10435;Parent=gene-CYJ03_RS10435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613476.1;locus_tag=CYJ03_RS10435;partial=true;product=glutamine amidotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000033.1	RefSeq	pseudogene	190	1317	.	-	.	ID=gene-CYJ03_RS10440;Name=CYJ03_RS10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10440;old_locus_tag=CYJ03_010430;partial=true;pseudo=true;start_range=.,190
NZ_PJUP02000033.1	Protein Homology	CDS	190	1317	.	-	0	ID=cds-CYJ03_RS10440;Parent=gene-CYJ03_RS10440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426281.1;locus_tag=CYJ03_RS10440;partial=true;product=amino acid permease;pseudo=true;start_range=.,190;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	1684	2526	.	+	.	ID=gene-CYJ03_RS10445;Name=CYJ03_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10445;old_locus_tag=CYJ03_010435
NZ_PJUP02000033.1	Protein Homology	CDS	1684	2526	.	+	0	ID=cds-WP_063284723.1;Parent=gene-CYJ03_RS10445;Dbxref=GenBank:WP_063284723.1;Name=WP_063284723.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=CYJ03_RS10445;product=formate/nitrite transporter family protein;protein_id=WP_063284723.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	2614	2949	.	+	.	ID=gene-CYJ03_RS10450;Name=CYJ03_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10450;old_locus_tag=CYJ03_010440
NZ_PJUP02000033.1	Protein Homology	CDS	2614	2949	.	+	0	ID=cds-WP_101458185.1;Parent=gene-CYJ03_RS10450;Dbxref=GenBank:WP_101458185.1;Name=WP_101458185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613144.1;locus_tag=CYJ03_RS10450;product=hypothetical protein;protein_id=WP_101458185.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	2956	3138	.	+	.	ID=gene-CYJ03_RS10455;Name=CYJ03_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10455;old_locus_tag=CYJ03_010445
NZ_PJUP02000033.1	Protein Homology	CDS	2956	3138	.	+	0	ID=cds-WP_014613143.1;Parent=gene-CYJ03_RS10455;Dbxref=GenBank:WP_014613143.1;Name=WP_014613143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=CYJ03_RS10455;product=hypothetical protein;protein_id=WP_014613143.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	3353	3544	.	-	.	ID=gene-CYJ03_RS10460;Name=CYJ03_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10460;old_locus_tag=CYJ03_010450
NZ_PJUP02000033.1	Protein Homology	CDS	3353	3544	.	-	0	ID=cds-WP_014613142.1;Parent=gene-CYJ03_RS10460;Dbxref=GenBank:WP_014613142.1;Name=WP_014613142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=CYJ03_RS10460;product=hypothetical protein;protein_id=WP_014613142.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	3541	4185	.	-	.	ID=gene-CYJ03_RS10465;Name=CYJ03_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10465;old_locus_tag=CYJ03_010455
NZ_PJUP02000033.1	Protein Homology	CDS	3541	4185	.	-	0	ID=cds-WP_014613141.1;Parent=gene-CYJ03_RS10465;Dbxref=GenBank:WP_014613141.1;Name=WP_014613141.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=CYJ03_RS10465;product=HAD family hydrolase;protein_id=WP_014613141.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	4231	5061	.	-	.	ID=gene-CYJ03_RS10470;Name=CYJ03_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10470;old_locus_tag=CYJ03_010460
NZ_PJUP02000033.1	Protein Homology	CDS	4231	5061	.	-	0	ID=cds-WP_015729555.1;Parent=gene-CYJ03_RS10470;Dbxref=GenBank:WP_015729555.1;Name=WP_015729555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=CYJ03_RS10470;product=VOC family protein;protein_id=WP_015729555.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	5141	5413	.	-	.	ID=gene-CYJ03_RS10475;Name=CYJ03_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10475;old_locus_tag=CYJ03_010465
NZ_PJUP02000033.1	Protein Homology	CDS	5141	5413	.	-	0	ID=cds-WP_226957581.1;Parent=gene-CYJ03_RS10475;Dbxref=GenBank:WP_226957581.1;Name=WP_226957581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426276.1;locus_tag=CYJ03_RS10475;product=hypothetical protein;protein_id=WP_226957581.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	5598	6518	.	-	.	ID=gene-CYJ03_RS10480;Name=CYJ03_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10480;old_locus_tag=CYJ03_010470
NZ_PJUP02000033.1	Protein Homology	CDS	5598	6518	.	-	0	ID=cds-WP_101458184.1;Parent=gene-CYJ03_RS10480;Dbxref=GenBank:WP_101458184.1;Name=WP_101458184.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169620.1;locus_tag=CYJ03_RS10480;product=bile acid:sodium symporter family protein;protein_id=WP_101458184.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	6708	7235	.	+	.	ID=gene-CYJ03_RS10485;Name=CYJ03_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10485;old_locus_tag=CYJ03_010475
NZ_PJUP02000033.1	Protein Homology	CDS	6708	7235	.	+	0	ID=cds-WP_101458183.1;Parent=gene-CYJ03_RS10485;Dbxref=GenBank:WP_101458183.1;Name=WP_101458183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167153.1;locus_tag=CYJ03_RS10485;product=hypothetical protein;protein_id=WP_101458183.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	7351	7860	.	-	.	ID=gene-CYJ03_RS10490;Name=CYJ03_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10490;old_locus_tag=CYJ03_010480
NZ_PJUP02000033.1	Protein Homology	CDS	7351	7860	.	-	0	ID=cds-WP_181022584.1;Parent=gene-CYJ03_RS10490;Dbxref=GenBank:WP_181022584.1;Name=WP_181022584.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219778.1;locus_tag=CYJ03_RS10490;product=SRPBCC family protein;protein_id=WP_181022584.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	7965	9266	.	-	.	ID=gene-CYJ03_RS10495;Name=CYJ03_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10495;old_locus_tag=CYJ03_010485
NZ_PJUP02000033.1	Protein Homology	CDS	7965	9266	.	-	0	ID=cds-WP_101458182.1;Parent=gene-CYJ03_RS10495;Dbxref=GenBank:WP_101458182.1;Name=WP_101458182.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613135.1;locus_tag=CYJ03_RS10495;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_101458182.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	9429	10565	.	-	.	ID=gene-CYJ03_RS10500;Name=CYJ03_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10500;old_locus_tag=CYJ03_010490
NZ_PJUP02000033.1	Protein Homology	CDS	9429	10565	.	-	0	ID=cds-WP_104052341.1;Parent=gene-CYJ03_RS10500;Dbxref=GenBank:WP_104052341.1;Name=WP_104052341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613134.1;locus_tag=CYJ03_RS10500;product=M20 peptidase aminoacylase family protein;protein_id=WP_104052341.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	10555	11745	.	-	.	ID=gene-CYJ03_RS10505;Name=CYJ03_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10505;old_locus_tag=CYJ03_010495
NZ_PJUP02000033.1	Protein Homology	CDS	10555	11745	.	-	0	ID=cds-WP_258058117.1;Parent=gene-CYJ03_RS10505;Dbxref=GenBank:WP_258058117.1;Name=WP_258058117.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167149.1;locus_tag=CYJ03_RS10505;product=SulP family inorganic anion transporter;protein_id=WP_258058117.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	12281	13522	.	-	.	ID=gene-CYJ03_RS10510;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CYJ03_RS10510;old_locus_tag=CYJ03_010500
NZ_PJUP02000033.1	Protein Homology	CDS	12281	13522	.	-	0	ID=cds-WP_014613132.1;Parent=gene-CYJ03_RS10510;Dbxref=GenBank:WP_014613132.1;Name=WP_014613132.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729560.1;locus_tag=CYJ03_RS10510;product=imidazolonepropionase;protein_id=WP_014613132.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	13519	15183	.	-	.	ID=gene-CYJ03_RS10515;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CYJ03_RS10515;old_locus_tag=CYJ03_010505
NZ_PJUP02000033.1	Protein Homology	CDS	13519	15183	.	-	0	ID=cds-WP_161193175.1;Parent=gene-CYJ03_RS10515;Dbxref=GenBank:WP_161193175.1;Name=WP_161193175.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613131.1;locus_tag=CYJ03_RS10515;product=urocanate hydratase;protein_id=WP_161193175.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	15205	16509	.	-	.	ID=gene-CYJ03_RS10520;Name=CYJ03_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10520;old_locus_tag=CYJ03_010510
NZ_PJUP02000033.1	Protein Homology	CDS	15205	16509	.	-	0	ID=cds-WP_101458179.1;Parent=gene-CYJ03_RS10520;Dbxref=GenBank:WP_101458179.1;Name=WP_101458179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=CYJ03_RS10520;product=YjiH family protein;protein_id=WP_101458179.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	16709	17590	.	+	.	ID=gene-CYJ03_RS10525;Name=CYJ03_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10525;old_locus_tag=CYJ03_010515
NZ_PJUP02000033.1	Protein Homology	CDS	16709	17590	.	+	0	ID=cds-WP_037542368.1;Parent=gene-CYJ03_RS10525;Dbxref=GenBank:WP_037542368.1;Name=WP_037542368.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167145.1;locus_tag=CYJ03_RS10525;product=LysR family transcriptional regulator;protein_id=WP_037542368.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	17779	18663	.	-	.	ID=gene-CYJ03_RS10530;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10530;old_locus_tag=CYJ03_010520
NZ_PJUP02000033.1	Protein Homology	CDS	17779	18663	.	-	0	ID=cds-WP_015729563.1;Parent=gene-CYJ03_RS10530;Dbxref=GenBank:WP_015729563.1;Name=WP_015729563.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167144.1;locus_tag=CYJ03_RS10530;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_015729563.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	19069	19998	.	+	.	ID=gene-CYJ03_RS10535;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CYJ03_RS10535;old_locus_tag=CYJ03_010525
NZ_PJUP02000033.1	Protein Homology	CDS	19069	19998	.	+	0	ID=cds-WP_014613127.1;Parent=gene-CYJ03_RS10535;Dbxref=GenBank:WP_014613127.1;Name=WP_014613127.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=CYJ03_RS10535;product=formimidoylglutamase;protein_id=WP_014613127.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	20108	20803	.	-	.	ID=gene-CYJ03_RS10540;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10540;old_locus_tag=CYJ03_010530
NZ_PJUP02000033.1	Protein Homology	CDS	20108	20803	.	-	0	ID=cds-WP_014613126.1;Parent=gene-CYJ03_RS10540;Dbxref=GenBank:WP_014613126.1;Name=WP_014613126.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=CYJ03_RS10540;product=ribose 5-phosphate isomerase A;protein_id=WP_014613126.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	20929	21588	.	+	.	ID=gene-CYJ03_RS10545;Name=CYJ03_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10545;old_locus_tag=CYJ03_010535
NZ_PJUP02000033.1	Protein Homology	CDS	20929	21588	.	+	0	ID=cds-WP_014613125.1;Parent=gene-CYJ03_RS10545;Dbxref=GenBank:WP_014613125.1;Name=WP_014613125.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613125.1;locus_tag=CYJ03_RS10545;product=MOSC domain-containing protein;protein_id=WP_014613125.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	21660	22685	.	-	.	ID=gene-CYJ03_RS10550;Name=CYJ03_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10550;old_locus_tag=CYJ03_010540
NZ_PJUP02000033.1	Protein Homology	CDS	21660	22685	.	-	0	ID=cds-WP_014613124.1;Parent=gene-CYJ03_RS10550;Dbxref=GenBank:WP_014613124.1;Name=WP_014613124.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613124.1;locus_tag=CYJ03_RS10550;product=aldose epimerase family protein;protein_id=WP_014613124.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	22720	23052	.	-	.	ID=gene-CYJ03_RS10555;Name=CYJ03_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10555;old_locus_tag=CYJ03_010545
NZ_PJUP02000033.1	Protein Homology	CDS	22720	23052	.	-	0	ID=cds-WP_101458321.1;Parent=gene-CYJ03_RS10555;Dbxref=GenBank:WP_101458321.1;Name=WP_101458321.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=CYJ03_RS10555;product=YnfA family protein;protein_id=WP_101458321.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	23205	24449	.	-	.	ID=gene-CYJ03_RS10560;Name=CYJ03_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10560;old_locus_tag=CYJ03_010550
NZ_PJUP02000033.1	Protein Homology	CDS	23205	24449	.	-	0	ID=cds-WP_014613122.1;Parent=gene-CYJ03_RS10560;Dbxref=GenBank:WP_014613122.1;Name=WP_014613122.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=CYJ03_RS10560;product=ABC transporter permease;protein_id=WP_014613122.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	24451	25341	.	-	.	ID=gene-CYJ03_RS10565;Name=CYJ03_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10565;old_locus_tag=CYJ03_010555
NZ_PJUP02000033.1	Protein Homology	CDS	24451	25341	.	-	0	ID=cds-WP_104052342.1;Parent=gene-CYJ03_RS10565;Dbxref=GenBank:WP_104052342.1;Name=WP_104052342.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613121.1;locus_tag=CYJ03_RS10565;product=ABC transporter ATP-binding protein;protein_id=WP_104052342.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	25600	26286	.	-	.	ID=gene-CYJ03_RS10570;Name=CYJ03_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10570;old_locus_tag=CYJ03_010560
NZ_PJUP02000033.1	Protein Homology	CDS	25600	26286	.	-	0	ID=cds-WP_014613120.1;Parent=gene-CYJ03_RS10570;Dbxref=GenBank:WP_014613120.1;Name=WP_014613120.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613120.1;locus_tag=CYJ03_RS10570;product=DUF805 domain-containing protein;protein_id=WP_014613120.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	26466	27074	.	+	.	ID=gene-CYJ03_RS10575;Name=CYJ03_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10575;old_locus_tag=CYJ03_010565
NZ_PJUP02000033.1	Protein Homology	CDS	26466	27074	.	+	0	ID=cds-WP_014613119.1;Parent=gene-CYJ03_RS10575;Dbxref=GenBank:WP_014613119.1;Name=WP_014613119.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613119.1;locus_tag=CYJ03_RS10575;product=DNA-3-methyladenine glycosylase;protein_id=WP_014613119.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	27155	28489	.	-	.	ID=gene-CYJ03_RS10580;Name=CYJ03_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10580;old_locus_tag=CYJ03_010570
NZ_PJUP02000033.1	Protein Homology	CDS	27155	28489	.	-	0	ID=cds-WP_104052343.1;Parent=gene-CYJ03_RS10580;Dbxref=GenBank:WP_104052343.1;Name=WP_104052343.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613118.1;locus_tag=CYJ03_RS10580;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_104052343.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	28660	29475	.	-	.	ID=gene-CYJ03_RS10585;Name=CYJ03_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10585;old_locus_tag=CYJ03_010575
NZ_PJUP02000033.1	Protein Homology	CDS	28660	29475	.	-	0	ID=cds-WP_104052344.1;Parent=gene-CYJ03_RS10585;Dbxref=GenBank:WP_104052344.1;Name=WP_104052344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729569.1;locus_tag=CYJ03_RS10585;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_104052344.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	29472	30029	.	-	.	ID=gene-CYJ03_RS10590;Name=CYJ03_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10590;old_locus_tag=CYJ03_010580
NZ_PJUP02000033.1	Protein Homology	CDS	29472	30029	.	-	0	ID=cds-WP_020219789.1;Parent=gene-CYJ03_RS10590;Dbxref=GenBank:WP_020219789.1;Name=WP_020219789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167131.1;locus_tag=CYJ03_RS10590;product=HAAS signaling domain-containing protein;protein_id=WP_020219789.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	30026	30346	.	-	.	ID=gene-CYJ03_RS10595;Name=CYJ03_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10595;old_locus_tag=CYJ03_010585
NZ_PJUP02000033.1	Protein Homology	CDS	30026	30346	.	-	0	ID=cds-WP_014613115.1;Parent=gene-CYJ03_RS10595;Dbxref=GenBank:WP_014613115.1;Name=WP_014613115.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=CYJ03_RS10595;product=PadR family transcriptional regulator;protein_id=WP_014613115.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	30538	31323	.	-	.	ID=gene-CYJ03_RS10600;Name=CYJ03_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10600;old_locus_tag=CYJ03_010590
NZ_PJUP02000033.1	Protein Homology	CDS	30538	31323	.	-	0	ID=cds-WP_104052345.1;Parent=gene-CYJ03_RS10600;Dbxref=GenBank:WP_104052345.1;Name=WP_104052345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167129.1;locus_tag=CYJ03_RS10600;product=hypothetical protein;protein_id=WP_104052345.1;transl_table=11
NZ_PJUP02000033.1	RefSeq	gene	31458	31742	.	+	.	ID=gene-CYJ03_RS12895;Name=CYJ03_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12895
NZ_PJUP02000033.1	GeneMarkS-2+	CDS	31458	31742	.	+	0	ID=cds-WP_373408331.1;Parent=gene-CYJ03_RS12895;Dbxref=GenBank:WP_373408331.1;Name=WP_373408331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12895;product=hypothetical protein;protein_id=WP_373408331.1;transl_table=11
##sequence-region NZ_PJUP02000005.1 1 114560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000005.1	RefSeq	region	1	114560	.	+	.	ID=NZ_PJUP02000005.1:1..114560;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000005.1	RefSeq	pseudogene	300	527	.	+	.	ID=gene-CYJ03_RS02635;Name=CYJ03_RS02635;end_range=527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS02635;old_locus_tag=CYJ03_002625;partial=true;pseudo=true;start_range=.,300
NZ_PJUP02000005.1	Protein Homology	CDS	300	527	.	+	0	ID=cds-CYJ03_RS02635;Parent=gene-CYJ03_RS02635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009691,GO:0016799;end_range=527,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499247.1;locus_tag=CYJ03_RS02635;partial=true;product=LOG family protein;pseudo=true;start_range=.,300;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	865	2559	.	-	.	ID=gene-CYJ03_RS02640;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02640;old_locus_tag=CYJ03_002630
NZ_PJUP02000005.1	Protein Homology	CDS	865	2559	.	-	0	ID=cds-WP_014612892.1;Parent=gene-CYJ03_RS02640;Dbxref=GenBank:WP_014612892.1;Name=WP_014612892.1;Ontology_term=GO:0031456,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=CYJ03_RS02640;product=choline dehydrogenase;protein_id=WP_014612892.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	2687	4180	.	-	.	ID=gene-CYJ03_RS02645;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02645;old_locus_tag=CYJ03_002635
NZ_PJUP02000005.1	Protein Homology	CDS	2687	4180	.	-	0	ID=cds-WP_014612891.1;Parent=gene-CYJ03_RS02645;Dbxref=GenBank:WP_014612891.1;Name=WP_014612891.1;Ontology_term=GO:0031456,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167076.1;locus_tag=CYJ03_RS02645;product=betaine-aldehyde dehydrogenase;protein_id=WP_014612891.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	4402	4953	.	+	.	ID=gene-CYJ03_RS02650;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=CYJ03_RS02650;old_locus_tag=CYJ03_002640
NZ_PJUP02000005.1	Protein Homology	CDS	4402	4953	.	+	0	ID=cds-WP_014612890.1;Parent=gene-CYJ03_RS02650;Dbxref=GenBank:WP_014612890.1;Name=WP_014612890.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168438.1;locus_tag=CYJ03_RS02650;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_014612890.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	5989	7593	.	-	.	ID=gene-CYJ03_RS02655;Name=CYJ03_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02655;old_locus_tag=CYJ03_002645
NZ_PJUP02000005.1	Protein Homology	CDS	5989	7593	.	-	0	ID=cds-WP_233509222.1;Parent=gene-CYJ03_RS02655;Dbxref=GenBank:WP_233509222.1;Name=WP_233509222.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384111.1;locus_tag=CYJ03_RS02655;product=BCCT family transporter;protein_id=WP_233509222.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	8006	9328	.	-	.	ID=gene-CYJ03_RS02660;Name=CYJ03_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02660;old_locus_tag=CYJ03_002650
NZ_PJUP02000005.1	Protein Homology	CDS	8006	9328	.	-	0	ID=cds-WP_065353983.1;Parent=gene-CYJ03_RS02660;Dbxref=GenBank:WP_065353983.1;Name=WP_065353983.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167072.1;locus_tag=CYJ03_RS02660;product=Nramp family divalent metal transporter;protein_id=WP_065353983.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	9490	12354	.	-	.	ID=gene-CYJ03_RS02665;Name=CYJ03_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02665;old_locus_tag=CYJ03_002655
NZ_PJUP02000005.1	Protein Homology	CDS	9490	12354	.	-	0	ID=cds-WP_101457285.1;Parent=gene-CYJ03_RS02665;Dbxref=GenBank:WP_101457285.1;Name=WP_101457285.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=CYJ03_RS02665;product=DEAD/DEAH box helicase;protein_id=WP_101457285.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	12359	12751	.	-	.	ID=gene-CYJ03_RS02670;Name=CYJ03_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02670;old_locus_tag=CYJ03_002660
NZ_PJUP02000005.1	Protein Homology	CDS	12359	12751	.	-	0	ID=cds-WP_014612885.1;Parent=gene-CYJ03_RS02670;Dbxref=GenBank:WP_014612885.1;Name=WP_014612885.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612885.1;locus_tag=CYJ03_RS02670;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_014612885.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	12903	14324	.	-	.	ID=gene-CYJ03_RS02675;Name=CYJ03_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02675;old_locus_tag=CYJ03_002665
NZ_PJUP02000005.1	Protein Homology	CDS	12903	14324	.	-	0	ID=cds-WP_101457286.1;Parent=gene-CYJ03_RS02675;Dbxref=GenBank:WP_101457286.1;Name=WP_101457286.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612884.1;locus_tag=CYJ03_RS02675;product=alkaline phosphatase;protein_id=WP_101457286.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	14772	15407	.	+	.	ID=gene-CYJ03_RS02680;Name=CYJ03_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02680;old_locus_tag=CYJ03_002670
NZ_PJUP02000005.1	Protein Homology	CDS	14772	15407	.	+	0	ID=cds-WP_014612883.1;Parent=gene-CYJ03_RS02680;Dbxref=GenBank:WP_014612883.1;Name=WP_014612883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729699.1;locus_tag=CYJ03_RS02680;product=hypothetical protein;protein_id=WP_014612883.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	15561	16148	.	-	.	ID=gene-CYJ03_RS02685;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02685;old_locus_tag=CYJ03_002675
NZ_PJUP02000005.1	Protein Homology	CDS	15561	16148	.	-	0	ID=cds-WP_101457287.1;Parent=gene-CYJ03_RS02685;Dbxref=GenBank:WP_101457287.1;Name=WP_101457287.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612882.1;locus_tag=CYJ03_RS02685;product=signal peptidase I;protein_id=WP_101457287.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	16257	16805	.	-	.	ID=gene-CYJ03_RS02690;Name=CYJ03_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02690;old_locus_tag=CYJ03_002680
NZ_PJUP02000005.1	Protein Homology	CDS	16257	16805	.	-	0	ID=cds-WP_015729701.1;Parent=gene-CYJ03_RS02690;Dbxref=GenBank:WP_015729701.1;Name=WP_015729701.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168425.1;locus_tag=CYJ03_RS02690;product=helix-turn-helix domain-containing protein;protein_id=WP_015729701.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	16914	18092	.	+	.	ID=gene-CYJ03_RS02695;Name=CYJ03_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02695;old_locus_tag=CYJ03_002685
NZ_PJUP02000005.1	Protein Homology	CDS	16914	18092	.	+	0	ID=cds-WP_101457288.1;Parent=gene-CYJ03_RS02695;Dbxref=GenBank:WP_101457288.1;Name=WP_101457288.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612880.1;locus_tag=CYJ03_RS02695;product=CynX/NimT family MFS transporter;protein_id=WP_101457288.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	18246	19256	.	-	.	ID=gene-CYJ03_RS02700;Name=CYJ03_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02700;old_locus_tag=CYJ03_002690
NZ_PJUP02000005.1	Protein Homology	CDS	18246	19256	.	-	0	ID=cds-WP_101457289.1;Parent=gene-CYJ03_RS02700;Dbxref=GenBank:WP_101457289.1;Name=WP_101457289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729703.1;locus_tag=CYJ03_RS02700;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_101457289.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	19470	21206	.	-	.	ID=gene-CYJ03_RS02705;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CYJ03_RS02705;old_locus_tag=CYJ03_002695
NZ_PJUP02000005.1	Protein Homology	CDS	19470	21206	.	-	0	ID=cds-WP_101457290.1;Parent=gene-CYJ03_RS02705;Dbxref=GenBank:WP_101457290.1;Name=WP_101457290.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=CYJ03_RS02705;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_101457290.1;transl_table=11
NZ_PJUP02000005.1	cmsearch	riboswitch	21403	21506	.	-	.	ID=id-NZ_PJUP02000005.1:21403..21506;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000005.1	RefSeq	gene	21974	23464	.	-	.	ID=gene-CYJ03_RS02710;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ03_RS02710;old_locus_tag=CYJ03_002700
NZ_PJUP02000005.1	Protein Homology	CDS	21974	23464	.	-	0	ID=cds-WP_014612876.1;Parent=gene-CYJ03_RS02710;Dbxref=GenBank:WP_014612876.1;Name=WP_014612876.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=CYJ03_RS02710;product=cardiolipin synthase;protein_id=WP_014612876.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	23610	24452	.	+	.	ID=gene-CYJ03_RS02715;Name=CYJ03_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02715;old_locus_tag=CYJ03_002705
NZ_PJUP02000005.1	Protein Homology	CDS	23610	24452	.	+	0	ID=cds-WP_101457291.1;Parent=gene-CYJ03_RS02715;Dbxref=GenBank:WP_101457291.1;Name=WP_101457291.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612875.1;locus_tag=CYJ03_RS02715;product=alpha/beta hydrolase;protein_id=WP_101457291.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	24648	25595	.	+	.	ID=gene-CYJ03_RS02720;Name=CYJ03_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02720;old_locus_tag=CYJ03_002710
NZ_PJUP02000005.1	Protein Homology	CDS	24648	25595	.	+	0	ID=cds-WP_101457292.1;Parent=gene-CYJ03_RS02720;Dbxref=GenBank:WP_101457292.1;Name=WP_101457292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612874.1;locus_tag=CYJ03_RS02720;product=nucleoside hydrolase;protein_id=WP_101457292.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	25709	28705	.	-	.	ID=gene-CYJ03_RS02725;Name=CYJ03_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02725;old_locus_tag=CYJ03_002715
NZ_PJUP02000005.1	Protein Homology	CDS	25709	28705	.	-	0	ID=cds-WP_101457293.1;Parent=gene-CYJ03_RS02725;Dbxref=GenBank:WP_101457293.1;Name=WP_101457293.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612873.1;locus_tag=CYJ03_RS02725;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=WP_101457293.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	28733	30112	.	-	.	ID=gene-CYJ03_RS02730;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02730;old_locus_tag=CYJ03_002720
NZ_PJUP02000005.1	Protein Homology	CDS	28733	30112	.	-	0	ID=cds-WP_014612872.1;Parent=gene-CYJ03_RS02730;Dbxref=GenBank:WP_014612872.1;Name=WP_014612872.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612872.1;locus_tag=CYJ03_RS02730;product=melibiose:sodium transporter MelB;protein_id=WP_014612872.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	30631	31821	.	+	.	ID=gene-CYJ03_RS02735;Name=CYJ03_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02735;old_locus_tag=CYJ03_002725
NZ_PJUP02000005.1	Protein Homology	CDS	30631	31821	.	+	0	ID=cds-WP_014612871.1;Parent=gene-CYJ03_RS02735;Dbxref=GenBank:WP_014612871.1;Name=WP_014612871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167057.1;locus_tag=CYJ03_RS02735;product=YbfB/YjiJ family MFS transporter;protein_id=WP_014612871.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	31977	33284	.	-	.	ID=gene-CYJ03_RS02740;Name=CYJ03_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02740;old_locus_tag=CYJ03_002730
NZ_PJUP02000005.1	Protein Homology	CDS	31977	33284	.	-	0	ID=cds-WP_104052132.1;Parent=gene-CYJ03_RS02740;Dbxref=GenBank:WP_104052132.1;Name=WP_104052132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168641.1;locus_tag=CYJ03_RS02740;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_104052132.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	33474	34337	.	-	.	ID=gene-CYJ03_RS02745;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CYJ03_RS02745;old_locus_tag=CYJ03_002735
NZ_PJUP02000005.1	Protein Homology	CDS	33474	34337	.	-	0	ID=cds-WP_014612869.1;Parent=gene-CYJ03_RS02745;Dbxref=GenBank:WP_014612869.1;Name=WP_014612869.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729709.1;locus_tag=CYJ03_RS02745;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_014612869.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	34715	35668	.	+	.	ID=gene-CYJ03_RS02750;Name=CYJ03_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02750;old_locus_tag=CYJ03_002740
NZ_PJUP02000005.1	Protein Homology	CDS	34715	35668	.	+	0	ID=cds-WP_104052133.1;Parent=gene-CYJ03_RS02750;Dbxref=GenBank:WP_104052133.1;Name=WP_104052133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837111.1;locus_tag=CYJ03_RS02750;product=extracellular solute-binding protein;protein_id=WP_104052133.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	35665	37218	.	+	.	ID=gene-CYJ03_RS02755;Name=CYJ03_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02755;old_locus_tag=CYJ03_002745
NZ_PJUP02000005.1	Protein Homology	CDS	35665	37218	.	+	0	ID=cds-WP_104052134.1;Parent=gene-CYJ03_RS02755;Dbxref=GenBank:WP_104052134.1;Name=WP_104052134.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612867.1;locus_tag=CYJ03_RS02755;product=sensor histidine kinase;protein_id=WP_104052134.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	37211	37954	.	+	.	ID=gene-CYJ03_RS02760;Name=CYJ03_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02760;old_locus_tag=CYJ03_002750
NZ_PJUP02000005.1	Protein Homology	CDS	37211	37954	.	+	0	ID=cds-WP_104052135.1;Parent=gene-CYJ03_RS02760;Dbxref=GenBank:WP_104052135.1;Name=WP_104052135.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612866.1;locus_tag=CYJ03_RS02760;product=response regulator transcription factor;protein_id=WP_104052135.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	38157	39536	.	-	.	ID=gene-CYJ03_RS02765;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CYJ03_RS02765;old_locus_tag=CYJ03_002755
NZ_PJUP02000005.1	Protein Homology	CDS	38157	39536	.	-	0	ID=cds-WP_014612865.1;Parent=gene-CYJ03_RS02765;Dbxref=GenBank:WP_014612865.1;Name=WP_014612865.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=CYJ03_RS02765;product=hexose-6-phosphate:phosphate antiporter UhpT;protein_id=WP_014612865.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	39806	40741	.	+	.	ID=gene-CYJ03_RS02770;Name=CYJ03_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02770;old_locus_tag=CYJ03_002760
NZ_PJUP02000005.1	Protein Homology	CDS	39806	40741	.	+	0	ID=cds-WP_104052136.1;Parent=gene-CYJ03_RS02770;Dbxref=GenBank:WP_104052136.1;Name=WP_104052136.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=CYJ03_RS02770;product=ketopantoate reductase family protein;protein_id=WP_104052136.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	41233	41919	.	+	.	ID=gene-CYJ03_RS02775;Name=CYJ03_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02775;old_locus_tag=CYJ03_002765
NZ_PJUP02000005.1	Protein Homology	CDS	41233	41919	.	+	0	ID=cds-WP_014612863.1;Parent=gene-CYJ03_RS02775;Dbxref=GenBank:WP_014612863.1;Name=WP_014612863.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169009.1;locus_tag=CYJ03_RS02775;product=acetolactate decarboxylase;protein_id=WP_014612863.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	42326	43216	.	+	.	ID=gene-CYJ03_RS02780;Name=CYJ03_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02780;old_locus_tag=CYJ03_002770
NZ_PJUP02000005.1	Protein Homology	CDS	42326	43216	.	+	0	ID=cds-WP_015729712.1;Parent=gene-CYJ03_RS02780;Dbxref=GenBank:WP_015729712.1;Name=WP_015729712.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729712.1;locus_tag=CYJ03_RS02780;product=fructose bisphosphate aldolase;protein_id=WP_015729712.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	43709	45382	.	-	.	ID=gene-CYJ03_RS02785;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02785;old_locus_tag=CYJ03_002775
NZ_PJUP02000005.1	Protein Homology	CDS	43709	45382	.	-	0	ID=cds-WP_104052137.1;Parent=gene-CYJ03_RS02785;Dbxref=GenBank:WP_104052137.1;Name=WP_104052137.1;gbkey=CDS;gene=adcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729713.1;locus_tag=CYJ03_RS02785;product=zinc ABC transporter substrate-binding lipoprotein AdcA;protein_id=WP_104052137.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	45658	46350	.	-	.	ID=gene-CYJ03_RS02790;Name=CYJ03_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02790;old_locus_tag=CYJ03_002780
NZ_PJUP02000005.1	Protein Homology	CDS	45658	46350	.	-	0	ID=cds-WP_104052138.1;Parent=gene-CYJ03_RS02790;Dbxref=GenBank:WP_104052138.1;Name=WP_104052138.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=CYJ03_RS02790;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_104052138.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	46715	47104	.	-	.	ID=gene-CYJ03_RS02795;Name=CYJ03_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02795;old_locus_tag=CYJ03_002785
NZ_PJUP02000005.1	Protein Homology	CDS	46715	47104	.	-	0	ID=cds-WP_020219423.1;Parent=gene-CYJ03_RS02795;Dbxref=GenBank:WP_020219423.1;Name=WP_020219423.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219423.1;locus_tag=CYJ03_RS02795;product=tautomerase family protein;protein_id=WP_020219423.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	47220	48716	.	-	.	ID=gene-CYJ03_RS02800;Name=CYJ03_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02800;old_locus_tag=CYJ03_002790
NZ_PJUP02000005.1	Protein Homology	CDS	47220	48716	.	-	0	ID=cds-WP_104052139.1;Parent=gene-CYJ03_RS02800;Dbxref=GenBank:WP_104052139.1;Name=WP_104052139.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729716.1;locus_tag=CYJ03_RS02800;product=sodium:solute symporter family protein;protein_id=WP_104052139.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	48727	50106	.	-	.	ID=gene-CYJ03_RS02805;Name=CYJ03_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02805;old_locus_tag=CYJ03_002795
NZ_PJUP02000005.1	Protein Homology	CDS	48727	50106	.	-	0	ID=cds-WP_014612856.1;Parent=gene-CYJ03_RS02805;Dbxref=GenBank:WP_014612856.1;Name=WP_014612856.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729717.1;locus_tag=CYJ03_RS02805;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014612856.1;transl_table=11
NZ_PJUP02000005.1	cmsearch	riboswitch	50152	50252	.	-	.	ID=id-NZ_PJUP02000005.1:50152..50252;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000005.1	RefSeq	gene	50409	51686	.	-	.	ID=gene-CYJ03_RS02810;Name=CYJ03_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02810;old_locus_tag=CYJ03_002800
NZ_PJUP02000005.1	Protein Homology	CDS	50409	51686	.	-	0	ID=cds-WP_103263667.1;Parent=gene-CYJ03_RS02810;Dbxref=GenBank:WP_103263667.1;Name=WP_103263667.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=CYJ03_RS02810;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_103263667.1;transl_table=11
NZ_PJUP02000005.1	cmsearch	riboswitch	51750	51848	.	-	.	ID=id-NZ_PJUP02000005.1:51750..51848;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000005.1	RefSeq	gene	52046	52585	.	-	.	ID=gene-CYJ03_RS02815;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CYJ03_RS02815;old_locus_tag=CYJ03_002805
NZ_PJUP02000005.1	Protein Homology	CDS	52046	52585	.	-	0	ID=cds-WP_014612853.1;Parent=gene-CYJ03_RS02815;Dbxref=GenBank:WP_014612853.1;Name=WP_014612853.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612853.1;locus_tag=CYJ03_RS02815;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_014612853.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	52582	54432	.	-	.	ID=gene-CYJ03_RS02820;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CYJ03_RS02820;old_locus_tag=CYJ03_002810
NZ_PJUP02000005.1	Protein Homology	CDS	52582	54432	.	-	0	ID=cds-WP_014612852.1;Parent=gene-CYJ03_RS02820;Dbxref=GenBank:WP_014612852.1;Name=WP_014612852.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=CYJ03_RS02820;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_014612852.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	55246	55359	.	+	.	ID=gene-CYJ03_RS12180;Name=CYJ03_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12180
NZ_PJUP02000005.1	Protein Homology	CDS	55246	55359	.	+	0	ID=cds-WP_110144662.1;Parent=gene-CYJ03_RS12180;Dbxref=GenBank:WP_110144662.1;Name=WP_110144662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033608.1;locus_tag=CYJ03_RS12180;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_110144662.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	55487	56848	.	-	.	ID=gene-CYJ03_RS02825;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ03_RS02825;old_locus_tag=CYJ03_002815
NZ_PJUP02000005.1	Protein Homology	CDS	55487	56848	.	-	0	ID=cds-WP_014612850.1;Parent=gene-CYJ03_RS02825;Dbxref=GenBank:WP_014612850.1;Name=WP_014612850.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219422.1;locus_tag=CYJ03_RS02825;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014612850.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	56867	57151	.	-	.	ID=gene-CYJ03_RS02830;Name=CYJ03_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02830;old_locus_tag=CYJ03_002820
NZ_PJUP02000005.1	Protein Homology	CDS	56867	57151	.	-	0	ID=cds-WP_014612849.1;Parent=gene-CYJ03_RS02830;Dbxref=GenBank:WP_014612849.1;Name=WP_014612849.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=CYJ03_RS02830;product=PTS sugar transporter subunit IIB;protein_id=WP_014612849.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	57148	57597	.	-	.	ID=gene-CYJ03_RS02835;Name=CYJ03_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02835;old_locus_tag=CYJ03_002825
NZ_PJUP02000005.1	Protein Homology	CDS	57148	57597	.	-	0	ID=cds-WP_014612848.1;Parent=gene-CYJ03_RS02835;Dbxref=GenBank:WP_014612848.1;Name=WP_014612848.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612848.1;locus_tag=CYJ03_RS02835;product=PTS sugar transporter subunit IIA;protein_id=WP_014612848.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	57610	59544	.	-	.	ID=gene-CYJ03_RS02840;Name=CYJ03_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02840;old_locus_tag=CYJ03_002830
NZ_PJUP02000005.1	Protein Homology	CDS	57610	59544	.	-	0	ID=cds-WP_015729721.1;Parent=gene-CYJ03_RS02840;Dbxref=GenBank:WP_015729721.1;Name=WP_015729721.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729721.1;locus_tag=CYJ03_RS02840;product=BglG family transcription antiterminator;protein_id=WP_015729721.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	60060	61094	.	-	.	ID=gene-CYJ03_RS02845;Name=CYJ03_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02845;old_locus_tag=CYJ03_002835
NZ_PJUP02000005.1	Protein Homology	CDS	60060	61094	.	-	0	ID=cds-WP_014612846.1;Parent=gene-CYJ03_RS02845;Dbxref=GenBank:WP_014612846.1;Name=WP_014612846.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612846.1;locus_tag=CYJ03_RS02845;product=sensor histidine kinase;protein_id=WP_014612846.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	61095	61781	.	-	.	ID=gene-CYJ03_RS02850;Name=CYJ03_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02850;old_locus_tag=CYJ03_002840
NZ_PJUP02000005.1	Protein Homology	CDS	61095	61781	.	-	0	ID=cds-WP_015729722.1;Parent=gene-CYJ03_RS02850;Dbxref=GenBank:WP_015729722.1;Name=WP_015729722.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729722.1;locus_tag=CYJ03_RS02850;product=response regulator transcription factor;protein_id=WP_015729722.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	61759	62217	.	-	.	ID=gene-CYJ03_RS02855;Name=CYJ03_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02855;old_locus_tag=CYJ03_002845
NZ_PJUP02000005.1	Protein Homology	CDS	61759	62217	.	-	0	ID=cds-WP_014612844.1;Parent=gene-CYJ03_RS02855;Dbxref=GenBank:WP_014612844.1;Name=WP_014612844.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612844.1;locus_tag=CYJ03_RS02855;product=DoxX family protein;protein_id=WP_014612844.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	62257	62709	.	-	.	ID=gene-CYJ03_RS02860;Name=CYJ03_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02860;old_locus_tag=CYJ03_002850
NZ_PJUP02000005.1	Protein Homology	CDS	62257	62709	.	-	0	ID=cds-WP_014612843.1;Parent=gene-CYJ03_RS02860;Dbxref=GenBank:WP_014612843.1;Name=WP_014612843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093553.1;locus_tag=CYJ03_RS02860;product=DM13 domain-containing protein;protein_id=WP_014612843.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	pseudogene	64413	64802	.	-	.	ID=gene-CYJ03_RS02865;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=CYJ03_RS02865;old_locus_tag=CYJ03_002855;pseudo=true
NZ_PJUP02000005.1	Protein Homology	CDS	64413	64802	.	-	0	ID=cds-CYJ03_RS02865;Parent=gene-CYJ03_RS02865;Note=internal stop;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=CYJ03_RS02865;product=D-ribose pyranase;pseudo=true;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	64795	65679	.	-	.	ID=gene-CYJ03_RS02870;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CYJ03_RS02870;old_locus_tag=CYJ03_002860
NZ_PJUP02000005.1	Protein Homology	CDS	64795	65679	.	-	0	ID=cds-WP_041614892.1;Parent=gene-CYJ03_RS02870;Dbxref=GenBank:WP_041614892.1;Name=WP_041614892.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612840.1;locus_tag=CYJ03_RS02870;product=ribokinase;protein_id=WP_041614892.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	65679	66650	.	-	.	ID=gene-CYJ03_RS02875;Name=CYJ03_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02875;old_locus_tag=CYJ03_002865
NZ_PJUP02000005.1	Protein Homology	CDS	65679	66650	.	-	0	ID=cds-WP_063284752.1;Parent=gene-CYJ03_RS02875;Dbxref=GenBank:WP_063284752.1;Name=WP_063284752.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=CYJ03_RS02875;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_063284752.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	66920	67435	.	+	.	ID=gene-CYJ03_RS02880;Name=CYJ03_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02880;old_locus_tag=CYJ03_002870
NZ_PJUP02000005.1	Protein Homology	CDS	66920	67435	.	+	0	ID=cds-WP_015729726.1;Parent=gene-CYJ03_RS02880;Dbxref=GenBank:WP_015729726.1;Name=WP_015729726.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167112.1;locus_tag=CYJ03_RS02880;product=peroxiredoxin family protein;protein_id=WP_015729726.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	67774	68229	.	-	.	ID=gene-CYJ03_RS02885;Name=CYJ03_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02885;old_locus_tag=CYJ03_002875
NZ_PJUP02000005.1	Protein Homology	CDS	67774	68229	.	-	0	ID=cds-WP_014612837.1;Parent=gene-CYJ03_RS02885;Dbxref=GenBank:WP_014612837.1;Name=WP_014612837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220171.1;locus_tag=CYJ03_RS02885;product=P-loop NTPase family protein;protein_id=WP_014612837.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	68456	68968	.	+	.	ID=gene-CYJ03_RS02890;Name=CYJ03_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02890;old_locus_tag=CYJ03_002880
NZ_PJUP02000005.1	Protein Homology	CDS	68456	68968	.	+	0	ID=cds-WP_063284751.1;Parent=gene-CYJ03_RS02890;Dbxref=GenBank:WP_063284751.1;Name=WP_063284751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171926.1;locus_tag=CYJ03_RS02890;product=DUF4242 domain-containing protein;protein_id=WP_063284751.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	69139	69879	.	+	.	ID=gene-CYJ03_RS02895;Name=CYJ03_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02895;old_locus_tag=CYJ03_002885
NZ_PJUP02000005.1	Protein Homology	CDS	69139	69879	.	+	0	ID=cds-WP_104052140.1;Parent=gene-CYJ03_RS02895;Dbxref=GenBank:WP_104052140.1;Name=WP_104052140.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590849.1;locus_tag=CYJ03_RS02895;product=ABC transporter ATP-binding protein;protein_id=WP_104052140.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	69893	70840	.	+	.	ID=gene-CYJ03_RS02900;Name=CYJ03_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02900;old_locus_tag=CYJ03_002890
NZ_PJUP02000005.1	Protein Homology	CDS	69893	70840	.	+	0	ID=cds-WP_014612834.1;Parent=gene-CYJ03_RS02900;Dbxref=GenBank:WP_014612834.1;Name=WP_014612834.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612834.1;locus_tag=CYJ03_RS02900;product=ABC transporter substrate-binding protein;protein_id=WP_014612834.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	70846	71610	.	+	.	ID=gene-CYJ03_RS02905;Name=CYJ03_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02905;old_locus_tag=CYJ03_002895
NZ_PJUP02000005.1	Protein Homology	CDS	70846	71610	.	+	0	ID=cds-WP_037542150.1;Parent=gene-CYJ03_RS02905;Dbxref=GenBank:WP_037542150.1;Name=WP_037542150.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729730.1;locus_tag=CYJ03_RS02905;product=ABC transporter permease;protein_id=WP_037542150.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	71630	72673	.	+	.	ID=gene-CYJ03_RS02910;Name=CYJ03_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02910;old_locus_tag=CYJ03_002900
NZ_PJUP02000005.1	Protein Homology	CDS	71630	72673	.	+	0	ID=cds-WP_037542148.1;Parent=gene-CYJ03_RS02910;Dbxref=GenBank:WP_037542148.1;Name=WP_037542148.1;Ontology_term=GO:0003995,GO:0016627,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612832.1;locus_tag=CYJ03_RS02910;product=acyl-CoA dehydrogenase family protein;protein_id=WP_037542148.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	73019	74191	.	+	.	ID=gene-CYJ03_RS02915;Name=CYJ03_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02915;old_locus_tag=CYJ03_002905
NZ_PJUP02000005.1	Protein Homology	CDS	73019	74191	.	+	0	ID=cds-WP_014612831.1;Parent=gene-CYJ03_RS02915;Dbxref=GenBank:WP_014612831.1;Name=WP_014612831.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729733.1;locus_tag=CYJ03_RS02915;product=MFS transporter;protein_id=WP_014612831.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	74479	76050	.	+	.	ID=gene-CYJ03_RS02920;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=CYJ03_RS02920;old_locus_tag=CYJ03_002910
NZ_PJUP02000005.1	Protein Homology	CDS	74479	76050	.	+	0	ID=cds-WP_096536579.1;Parent=gene-CYJ03_RS02920;Dbxref=GenBank:WP_096536579.1;Name=WP_096536579.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729734.1;locus_tag=CYJ03_RS02920;product=fatty acid degradation protein FadX;protein_id=WP_096536579.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	76069	77583	.	+	.	ID=gene-CYJ03_RS02925;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CYJ03_RS02925;old_locus_tag=CYJ03_002915
NZ_PJUP02000005.1	Protein Homology	CDS	76069	77583	.	+	0	ID=cds-WP_014612829.1;Parent=gene-CYJ03_RS02925;Dbxref=GenBank:WP_014612829.1;Name=WP_014612829.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612829.1;locus_tag=CYJ03_RS02925;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_014612829.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	77620	78831	.	+	.	ID=gene-CYJ03_RS02930;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CYJ03_RS02930;old_locus_tag=CYJ03_002920
NZ_PJUP02000005.1	Protein Homology	CDS	77620	78831	.	+	0	ID=cds-WP_063284747.1;Parent=gene-CYJ03_RS02930;Dbxref=GenBank:WP_063284747.1;Name=WP_063284747.1;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167102.1;locus_tag=CYJ03_RS02930;product=acyl-CoA dehydrogenase FadE;protein_id=WP_063284747.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	78876	81137	.	+	.	ID=gene-CYJ03_RS02935;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02935;old_locus_tag=CYJ03_002925
NZ_PJUP02000005.1	Protein Homology	CDS	78876	81137	.	+	0	ID=cds-WP_096536581.1;Parent=gene-CYJ03_RS02935;Dbxref=GenBank:WP_096536581.1;Name=WP_096536581.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612827.1;locus_tag=CYJ03_RS02935;product=3-hydroxyacyl-CoA dehydrogenase/crotonase FadB;protein_id=WP_096536581.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	81161	82342	.	+	.	ID=gene-CYJ03_RS02940;Name=CYJ03_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02940;old_locus_tag=CYJ03_002930
NZ_PJUP02000005.1	Protein Homology	CDS	81161	82342	.	+	0	ID=cds-WP_014612826.1;Parent=gene-CYJ03_RS02940;Dbxref=GenBank:WP_014612826.1;Name=WP_014612826.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612826.1;locus_tag=CYJ03_RS02940;product=thiolase family protein;protein_id=WP_014612826.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	82404	83735	.	-	.	ID=gene-CYJ03_RS02945;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02945;old_locus_tag=CYJ03_002935
NZ_PJUP02000005.1	Protein Homology	CDS	82404	83735	.	-	0	ID=cds-WP_020220167.1;Parent=gene-CYJ03_RS02945;Dbxref=GenBank:WP_020220167.1;Name=WP_020220167.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=CYJ03_RS02945;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_020220167.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	83728	85236	.	-	.	ID=gene-CYJ03_RS02950;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02950;old_locus_tag=CYJ03_002940
NZ_PJUP02000005.1	Protein Homology	CDS	83728	85236	.	-	0	ID=cds-WP_014612824.1;Parent=gene-CYJ03_RS02950;Dbxref=GenBank:WP_014612824.1;Name=WP_014612824.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612824.1;locus_tag=CYJ03_RS02950;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_014612824.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	85252	87639	.	-	.	ID=gene-CYJ03_RS02955;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CYJ03_RS02955;old_locus_tag=CYJ03_002945
NZ_PJUP02000005.1	Protein Homology	CDS	85252	87639	.	-	0	ID=cds-WP_015729739.1;Parent=gene-CYJ03_RS02955;Dbxref=GenBank:WP_015729739.1;Name=WP_015729739.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=CYJ03_RS02955;product=accessory Sec system translocase SecA2;protein_id=WP_015729739.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	87636	88562	.	-	.	ID=gene-CYJ03_RS02960;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CYJ03_RS02960;old_locus_tag=CYJ03_002950
NZ_PJUP02000005.1	Protein Homology	CDS	87636	88562	.	-	0	ID=cds-WP_096536584.1;Parent=gene-CYJ03_RS02960;Dbxref=GenBank:WP_096536584.1;Name=WP_096536584.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729740.1;locus_tag=CYJ03_RS02960;product=accessory Sec system protein Asp3;protein_id=WP_096536584.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	88552	90096	.	-	.	ID=gene-CYJ03_RS02965;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CYJ03_RS02965;old_locus_tag=CYJ03_002955
NZ_PJUP02000005.1	Protein Homology	CDS	88552	90096	.	-	0	ID=cds-WP_063284745.1;Parent=gene-CYJ03_RS02965;Dbxref=GenBank:WP_063284745.1;Name=WP_063284745.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612821.1;locus_tag=CYJ03_RS02965;product=accessory Sec system protein Asp2;protein_id=WP_063284745.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	90080	91645	.	-	.	ID=gene-CYJ03_RS02970;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CYJ03_RS02970;old_locus_tag=CYJ03_002960
NZ_PJUP02000005.1	Protein Homology	CDS	90080	91645	.	-	0	ID=cds-WP_015729742.1;Parent=gene-CYJ03_RS02970;Dbxref=GenBank:WP_015729742.1;Name=WP_015729742.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612820.1;locus_tag=CYJ03_RS02970;product=accessory Sec system protein Asp1;protein_id=WP_015729742.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	91656	92864	.	-	.	ID=gene-CYJ03_RS02975;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=CYJ03_RS02975;old_locus_tag=CYJ03_002965
NZ_PJUP02000005.1	Protein Homology	CDS	91656	92864	.	-	0	ID=cds-WP_037544107.1;Parent=gene-CYJ03_RS02975;Dbxref=GenBank:WP_037544107.1;Name=WP_037544107.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916108.1;locus_tag=CYJ03_RS02975;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_037544107.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	92988	107528	.	-	.	ID=gene-CYJ03_RS12490;Name=CYJ03_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12490;old_locus_tag=CYJ03_002970
NZ_PJUP02000005.1	Protein Homology	CDS	92988	107528	.	-	0	ID=cds-WP_104052141.1;Parent=gene-CYJ03_RS12490;Dbxref=GenBank:WP_104052141.1;Name=WP_104052141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_152162866.1;locus_tag=CYJ03_RS12490;product=KxYKxGKxW signal peptide domain-containing protein;protein_id=WP_104052141.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	108285	109778	.	+	.	ID=gene-CYJ03_RS02985;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CYJ03_RS02985;old_locus_tag=CYJ03_002975
NZ_PJUP02000005.1	Protein Homology	CDS	108285	109778	.	+	0	ID=cds-WP_014612817.1;Parent=gene-CYJ03_RS02985;Dbxref=GenBank:WP_014612817.1;Name=WP_014612817.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=CYJ03_RS02985;product=L-lactate dehydrogenase (quinone);protein_id=WP_014612817.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	109792	109893	.	+	.	ID=gene-CYJ03_RS02990;Name=CYJ03_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02990;old_locus_tag=CYJ03_002980
NZ_PJUP02000005.1	Protein Homology	CDS	109792	109893	.	+	0	ID=cds-WP_019169745.1;Parent=gene-CYJ03_RS02990;Dbxref=GenBank:WP_019169745.1;Name=WP_019169745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165094.1;locus_tag=CYJ03_RS02990;product=SE2200 family small protein;protein_id=WP_019169745.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	110254	110520	.	-	.	ID=gene-CYJ03_RS02995;Name=CYJ03_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02995;old_locus_tag=CYJ03_002985
NZ_PJUP02000005.1	Protein Homology	CDS	110254	110520	.	-	0	ID=cds-WP_063278654.1;Parent=gene-CYJ03_RS02995;Dbxref=GenBank:WP_063278654.1;Name=WP_063278654.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074043.1;locus_tag=CYJ03_RS02995;product=Txe/YoeB family addiction module toxin;protein_id=WP_063278654.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	110520	110777	.	-	.	ID=gene-CYJ03_RS03000;Name=CYJ03_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03000;old_locus_tag=CYJ03_002990
NZ_PJUP02000005.1	Protein Homology	CDS	110520	110777	.	-	0	ID=cds-WP_014612814.1;Parent=gene-CYJ03_RS03000;Dbxref=GenBank:WP_014612814.1;Name=WP_014612814.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501216.1;locus_tag=CYJ03_RS03000;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_014612814.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	110971	112875	.	-	.	ID=gene-CYJ03_RS03005;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ03_RS03005;old_locus_tag=CYJ03_002995
NZ_PJUP02000005.1	Protein Homology	CDS	110971	112875	.	-	0	ID=cds-WP_104052142.1;Parent=gene-CYJ03_RS03005;Dbxref=GenBank:WP_104052142.1;Name=WP_104052142.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219985.1;locus_tag=CYJ03_RS03005;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_104052142.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	gene	113135	113629	.	+	.	ID=gene-CYJ03_RS03010;Name=CYJ03_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03010;old_locus_tag=CYJ03_003000
NZ_PJUP02000005.1	Protein Homology	CDS	113135	113629	.	+	0	ID=cds-WP_015729749.1;Parent=gene-CYJ03_RS03010;Dbxref=GenBank:WP_015729749.1;Name=WP_015729749.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=CYJ03_RS03010;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_015729749.1;transl_table=11
NZ_PJUP02000005.1	RefSeq	pseudogene	113931	114284	.	-	.	ID=gene-CYJ03_RS12725;Name=CYJ03_RS12725;end_range=114284,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12725;old_locus_tag=CYJ03_003005;partial=true;pseudo=true
NZ_PJUP02000005.1	Protein Homology	CDS	113931	114284	.	-	0	ID=cds-CYJ03_RS12725;Parent=gene-CYJ03_RS12725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=114284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12725;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000005.1	RefSeq	pseudogene	114343	114483	.	-	.	ID=gene-CYJ03_RS03020;Name=CYJ03_RS03020;end_range=114483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03020;old_locus_tag=CYJ03_003010;partial=true;pseudo=true
NZ_PJUP02000005.1	Protein Homology	CDS	114343	114483	.	-	0	ID=cds-CYJ03_RS03020;Parent=gene-CYJ03_RS03020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=114483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CYJ03_RS03020;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000034.1 1 30504
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000034.1	RefSeq	region	1	30504	.	+	.	ID=NZ_PJUP02000034.1:1..30504;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000034.1	RefSeq	pseudogene	169	261	.	-	.	ID=gene-CYJ03_RS10615;Name=CYJ03_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10615;old_locus_tag=CYJ03_010605;partial=true;pseudo=true;start_range=.,169
NZ_PJUP02000034.1	Protein Homology	CDS	169	261	.	-	0	ID=cds-CYJ03_RS10615;Parent=gene-CYJ03_RS10615;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500460.1;locus_tag=CYJ03_RS10615;partial=true;product=ferrochelatase;pseudo=true;start_range=.,169;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	1043	3130	.	+	.	ID=gene-CYJ03_RS10620;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ03_RS10620;old_locus_tag=CYJ03_010610
NZ_PJUP02000034.1	Protein Homology	CDS	1043	3130	.	+	0	ID=cds-WP_104052346.1;Parent=gene-CYJ03_RS10620;Dbxref=GenBank:WP_104052346.1;Name=WP_104052346.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612947.1;locus_tag=CYJ03_RS10620;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_104052346.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	3963	5138	.	-	.	ID=gene-CYJ03_RS10625;Name=CYJ03_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10625;old_locus_tag=CYJ03_010615
NZ_PJUP02000034.1	Protein Homology	CDS	3963	5138	.	-	0	ID=cds-WP_063279093.1;Parent=gene-CYJ03_RS10625;Dbxref=GenBank:WP_063279093.1;Name=WP_063279093.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=CYJ03_RS10625;product=ABC transporter permease;protein_id=WP_063279093.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	5122	5817	.	-	.	ID=gene-CYJ03_RS10630;Name=CYJ03_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10630;old_locus_tag=CYJ03_010620
NZ_PJUP02000034.1	Protein Homology	CDS	5122	5817	.	-	0	ID=cds-WP_014612945.1;Parent=gene-CYJ03_RS10630;Dbxref=GenBank:WP_014612945.1;Name=WP_014612945.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612945.1;locus_tag=CYJ03_RS10630;product=ABC transporter ATP-binding protein;protein_id=WP_014612945.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	5814	6866	.	-	.	ID=gene-CYJ03_RS10635;Name=CYJ03_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10635;old_locus_tag=CYJ03_010625
NZ_PJUP02000034.1	Protein Homology	CDS	5814	6866	.	-	0	ID=cds-WP_104052347.1;Parent=gene-CYJ03_RS10635;Dbxref=GenBank:WP_104052347.1;Name=WP_104052347.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729651.1;locus_tag=CYJ03_RS10635;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_104052347.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	6973	7614	.	-	.	ID=gene-CYJ03_RS10640;Name=CYJ03_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10640;old_locus_tag=CYJ03_010630
NZ_PJUP02000034.1	Protein Homology	CDS	6973	7614	.	-	0	ID=cds-WP_063284779.1;Parent=gene-CYJ03_RS10640;Dbxref=GenBank:WP_063284779.1;Name=WP_063284779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166327.1;locus_tag=CYJ03_RS10640;product=hypothetical protein;protein_id=WP_063284779.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	7792	7971	.	+	.	ID=gene-CYJ03_RS12670;Name=CYJ03_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12670
NZ_PJUP02000034.1	GeneMarkS-2+	CDS	7792	7971	.	+	0	ID=cds-WP_258058118.1;Parent=gene-CYJ03_RS12670;Dbxref=GenBank:WP_258058118.1;Name=WP_258058118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12670;product=hypothetical protein;protein_id=WP_258058118.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	7990	8394	.	+	.	ID=gene-CYJ03_RS10645;Name=CYJ03_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10645;old_locus_tag=CYJ03_010635
NZ_PJUP02000034.1	GeneMarkS-2+	CDS	7990	8394	.	+	0	ID=cds-WP_258058119.1;Parent=gene-CYJ03_RS10645;Dbxref=GenBank:WP_258058119.1;Name=WP_258058119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS10645;product=hypothetical protein;protein_id=WP_258058119.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	8453	8905	.	-	.	ID=gene-CYJ03_RS10650;Name=CYJ03_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10650;old_locus_tag=CYJ03_010640
NZ_PJUP02000034.1	Protein Homology	CDS	8453	8905	.	-	0	ID=cds-WP_101458307.1;Parent=gene-CYJ03_RS10650;Dbxref=GenBank:WP_101458307.1;Name=WP_101458307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612941.1;locus_tag=CYJ03_RS10650;product=DUF1648 domain-containing protein;protein_id=WP_101458307.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	8892	9755	.	-	.	ID=gene-CYJ03_RS10655;Name=CYJ03_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10655;old_locus_tag=CYJ03_010645
NZ_PJUP02000034.1	Protein Homology	CDS	8892	9755	.	-	0	ID=cds-WP_104052348.1;Parent=gene-CYJ03_RS10655;Dbxref=GenBank:WP_104052348.1;Name=WP_104052348.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=CYJ03_RS10655;product=fructosamine kinase family protein;protein_id=WP_104052348.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	9868	10530	.	+	.	ID=gene-CYJ03_RS10660;Name=CYJ03_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10660;old_locus_tag=CYJ03_010650
NZ_PJUP02000034.1	Protein Homology	CDS	9868	10530	.	+	0	ID=cds-WP_014612939.1;Parent=gene-CYJ03_RS10660;Dbxref=GenBank:WP_014612939.1;Name=WP_014612939.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166323.1;locus_tag=CYJ03_RS10660;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014612939.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	10863	11852	.	+	.	ID=gene-CYJ03_RS10665;Name=CYJ03_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10665;old_locus_tag=CYJ03_010655
NZ_PJUP02000034.1	Protein Homology	CDS	10863	11852	.	+	0	ID=cds-WP_104052349.1;Parent=gene-CYJ03_RS10665;Dbxref=GenBank:WP_104052349.1;Name=WP_104052349.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166322.1;locus_tag=CYJ03_RS10665;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_104052349.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	11871	12314	.	+	.	ID=gene-CYJ03_RS10670;Name=CYJ03_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10670;old_locus_tag=CYJ03_010660
NZ_PJUP02000034.1	Protein Homology	CDS	11871	12314	.	+	0	ID=cds-WP_014612937.1;Parent=gene-CYJ03_RS10670;Dbxref=GenBank:WP_014612937.1;Name=WP_014612937.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612937.1;locus_tag=CYJ03_RS10670;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_014612937.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	12327	13826	.	+	.	ID=gene-CYJ03_RS10675;Name=CYJ03_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10675;old_locus_tag=CYJ03_010665
NZ_PJUP02000034.1	Protein Homology	CDS	12327	13826	.	+	0	ID=cds-WP_104052350.1;Parent=gene-CYJ03_RS10675;Dbxref=GenBank:WP_104052350.1;Name=WP_104052350.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219451.1;locus_tag=CYJ03_RS10675;product=tripartite tricarboxylate transporter permease;protein_id=WP_104052350.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	13883	16405	.	-	.	ID=gene-CYJ03_RS10680;Name=CYJ03_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10680;old_locus_tag=CYJ03_010670
NZ_PJUP02000034.1	Protein Homology	CDS	13883	16405	.	-	0	ID=cds-WP_104052351.1;Parent=gene-CYJ03_RS10680;Dbxref=GenBank:WP_104052351.1;Name=WP_104052351.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612935.1;locus_tag=CYJ03_RS10680;product=glycosyltransferase;protein_id=WP_104052351.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	16610	17554	.	-	.	ID=gene-CYJ03_RS10685;Name=CYJ03_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10685;old_locus_tag=CYJ03_010675
NZ_PJUP02000034.1	Protein Homology	CDS	16610	17554	.	-	0	ID=cds-WP_063284772.1;Parent=gene-CYJ03_RS10685;Dbxref=GenBank:WP_063284772.1;Name=WP_063284772.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612934.1;locus_tag=CYJ03_RS10685;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_063284772.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	18561	20048	.	-	.	ID=gene-CYJ03_RS10690;Name=CYJ03_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10690;old_locus_tag=CYJ03_010680
NZ_PJUP02000034.1	Protein Homology	CDS	18561	20048	.	-	0	ID=cds-WP_014612933.1;Parent=gene-CYJ03_RS10690;Dbxref=GenBank:WP_014612933.1;Name=WP_014612933.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=CYJ03_RS10690;product=glycosyltransferase;protein_id=WP_014612933.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	20644	22815	.	+	.	ID=gene-CYJ03_RS10695;Name=CYJ03_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10695;old_locus_tag=CYJ03_010685
NZ_PJUP02000034.1	Protein Homology	CDS	20644	22815	.	+	0	ID=cds-WP_014612932.1;Parent=gene-CYJ03_RS10695;Dbxref=GenBank:WP_014612932.1;Name=WP_014612932.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ03_RS10695;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_014612932.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	23006	25177	.	+	.	ID=gene-CYJ03_RS10700;Name=CYJ03_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10700;old_locus_tag=CYJ03_010690
NZ_PJUP02000034.1	Protein Homology	CDS	23006	25177	.	+	0	ID=cds-WP_181137787.1;Parent=gene-CYJ03_RS10700;Dbxref=GenBank:WP_181137787.1;Name=WP_181137787.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612932.1;locus_tag=CYJ03_RS10700;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_181137787.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	25751	26440	.	-	.	ID=gene-CYJ03_RS10705;Name=CYJ03_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10705;old_locus_tag=CYJ03_010695
NZ_PJUP02000034.1	Protein Homology	CDS	25751	26440	.	-	0	ID=cds-WP_014612930.1;Parent=gene-CYJ03_RS10705;Dbxref=GenBank:WP_014612930.1;Name=WP_014612930.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729659.1;locus_tag=CYJ03_RS10705;product=ATP-binding cassette domain-containing protein;protein_id=WP_014612930.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	26433	27209	.	-	.	ID=gene-CYJ03_RS10710;Name=CYJ03_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10710;old_locus_tag=CYJ03_010700
NZ_PJUP02000034.1	Protein Homology	CDS	26433	27209	.	-	0	ID=cds-WP_104052353.1;Parent=gene-CYJ03_RS10710;Dbxref=GenBank:WP_104052353.1;Name=WP_104052353.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=CYJ03_RS10710;product=ATP-binding cassette domain-containing protein;protein_id=WP_104052353.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	27202	28026	.	-	.	ID=gene-CYJ03_RS10715;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10715;old_locus_tag=CYJ03_010705
NZ_PJUP02000034.1	Protein Homology	CDS	27202	28026	.	-	0	ID=cds-WP_014612928.1;Parent=gene-CYJ03_RS10715;Dbxref=GenBank:WP_014612928.1;Name=WP_014612928.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729661.1;locus_tag=CYJ03_RS10715;product=nickel transporter permease;protein_id=WP_014612928.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	28023	29009	.	-	.	ID=gene-CYJ03_RS10720;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10720;old_locus_tag=CYJ03_010710
NZ_PJUP02000034.1	Protein Homology	CDS	28023	29009	.	-	0	ID=cds-WP_014612927.1;Parent=gene-CYJ03_RS10720;Dbxref=GenBank:WP_014612927.1;Name=WP_014612927.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167506.1;locus_tag=CYJ03_RS10720;product=nickel ABC transporter permease;protein_id=WP_014612927.1;transl_table=11
NZ_PJUP02000034.1	RefSeq	gene	28999	30477	.	-	.	ID=gene-CYJ03_RS10725;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10725;old_locus_tag=CYJ03_010715
NZ_PJUP02000034.1	Protein Homology	CDS	28999	30477	.	-	0	ID=cds-WP_104052354.1;Parent=gene-CYJ03_RS10725;Dbxref=GenBank:WP_104052354.1;Name=WP_104052354.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=CYJ03_RS10725;product=nickel ABC transporter substrate-binding protein;protein_id=WP_104052354.1;transl_table=11
##sequence-region NZ_PJUP02000031.1 1 32403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000031.1	RefSeq	region	1	32403	.	+	.	ID=NZ_PJUP02000031.1:1..32403;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000031.1	RefSeq	gene	525	1838	.	+	.	ID=gene-CYJ03_RS10085;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CYJ03_RS10085;old_locus_tag=CYJ03_010075
NZ_PJUP02000031.1	Protein Homology	CDS	525	1838	.	+	0	ID=cds-WP_014613330.1;Parent=gene-CYJ03_RS10085;Dbxref=GenBank:WP_014613330.1;Name=WP_014613330.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613330.1;locus_tag=CYJ03_RS10085;product=transcription termination factor Rho;protein_id=WP_014613330.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	1961	2215	.	+	.	ID=gene-CYJ03_RS10090;Name=CYJ03_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10090;old_locus_tag=CYJ03_010080
NZ_PJUP02000031.1	Protein Homology	CDS	1961	2215	.	+	0	ID=cds-WP_014613331.1;Parent=gene-CYJ03_RS10090;Dbxref=GenBank:WP_014613331.1;Name=WP_014613331.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=CYJ03_RS10090;product=type B 50S ribosomal protein L31;protein_id=WP_014613331.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	2563	3165	.	+	.	ID=gene-CYJ03_RS10095;Name=CYJ03_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10095;old_locus_tag=CYJ03_010085
NZ_PJUP02000031.1	Protein Homology	CDS	2563	3165	.	+	0	ID=cds-WP_014613332.1;Parent=gene-CYJ03_RS10095;Dbxref=GenBank:WP_014613332.1;Name=WP_014613332.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613332.1;locus_tag=CYJ03_RS10095;product=thymidine kinase;protein_id=WP_014613332.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	3165	4241	.	+	.	ID=gene-CYJ03_RS10100;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10100;old_locus_tag=CYJ03_010090
NZ_PJUP02000031.1	Protein Homology	CDS	3165	4241	.	+	0	ID=cds-WP_015729443.1;Parent=gene-CYJ03_RS10100;Dbxref=GenBank:WP_015729443.1;Name=WP_015729443.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CYJ03_RS10100;product=peptide chain release factor 1;protein_id=WP_015729443.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	4231	5073	.	+	.	ID=gene-CYJ03_RS10105;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=CYJ03_RS10105;old_locus_tag=CYJ03_010095
NZ_PJUP02000031.1	Protein Homology	CDS	4231	5073	.	+	0	ID=cds-WP_014613334.1;Parent=gene-CYJ03_RS10105;Dbxref=GenBank:WP_014613334.1;Name=WP_014613334.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=CYJ03_RS10105;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_014613334.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	5239	6291	.	+	.	ID=gene-CYJ03_RS10110;Name=CYJ03_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10110;old_locus_tag=CYJ03_010100
NZ_PJUP02000031.1	Protein Homology	CDS	5239	6291	.	+	0	ID=cds-WP_104052333.1;Parent=gene-CYJ03_RS10110;Dbxref=GenBank:WP_104052333.1;Name=WP_104052333.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613335.1;locus_tag=CYJ03_RS10110;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_104052333.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	6288	6713	.	+	.	ID=gene-CYJ03_RS10115;Name=CYJ03_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10115;old_locus_tag=CYJ03_010105
NZ_PJUP02000031.1	Protein Homology	CDS	6288	6713	.	+	0	ID=cds-WP_104052334.1;Parent=gene-CYJ03_RS10115;Dbxref=GenBank:WP_104052334.1;Name=WP_104052334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=CYJ03_RS10115;product=low molecular weight protein arginine phosphatase;protein_id=WP_104052334.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	6831	7358	.	+	.	ID=gene-CYJ03_RS10120;Name=CYJ03_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10120;old_locus_tag=CYJ03_010110
NZ_PJUP02000031.1	Protein Homology	CDS	6831	7358	.	+	0	ID=cds-WP_014613337.1;Parent=gene-CYJ03_RS10120;Dbxref=GenBank:WP_014613337.1;Name=WP_014613337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=CYJ03_RS10120;product=TIGR01440 family protein;protein_id=WP_014613337.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	7379	8617	.	+	.	ID=gene-CYJ03_RS10125;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10125;old_locus_tag=CYJ03_010115
NZ_PJUP02000031.1	Protein Homology	CDS	7379	8617	.	+	0	ID=cds-WP_104052335.1;Parent=gene-CYJ03_RS10125;Dbxref=GenBank:WP_104052335.1;Name=WP_104052335.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500830.1;locus_tag=CYJ03_RS10125;product=serine hydroxymethyltransferase;protein_id=WP_104052335.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	8651	9280	.	+	.	ID=gene-CYJ03_RS10130;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CYJ03_RS10130;old_locus_tag=CYJ03_010120
NZ_PJUP02000031.1	Protein Homology	CDS	8651	9280	.	+	0	ID=cds-WP_014613339.1;Parent=gene-CYJ03_RS10130;Dbxref=GenBank:WP_014613339.1;Name=WP_014613339.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=CYJ03_RS10130;product=uracil phosphoribosyltransferase;protein_id=WP_014613339.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	9303	10442	.	+	.	ID=gene-CYJ03_RS10135;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10135;old_locus_tag=CYJ03_010125
NZ_PJUP02000031.1	Protein Homology	CDS	9303	10442	.	+	0	ID=cds-WP_015729441.1;Parent=gene-CYJ03_RS10135;Dbxref=GenBank:WP_015729441.1;Name=WP_015729441.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169294.1;locus_tag=CYJ03_RS10135;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_015729441.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	10611	10967	.	+	.	ID=gene-CYJ03_RS10140;Name=CYJ03_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10140;old_locus_tag=CYJ03_010130
NZ_PJUP02000031.1	Protein Homology	CDS	10611	10967	.	+	0	ID=cds-WP_014613341.1;Parent=gene-CYJ03_RS10140;Dbxref=GenBank:WP_014613341.1;Name=WP_014613341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=CYJ03_RS10140;product=ATP synthase subunit I;protein_id=WP_014613341.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	11002	11724	.	+	.	ID=gene-CYJ03_RS10145;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10145;old_locus_tag=CYJ03_010135
NZ_PJUP02000031.1	Protein Homology	CDS	11002	11724	.	+	0	ID=cds-WP_037542529.1;Parent=gene-CYJ03_RS10145;Dbxref=GenBank:WP_037542529.1;Name=WP_037542529.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275237.1;locus_tag=CYJ03_RS10145;product=F0F1 ATP synthase subunit A;protein_id=WP_037542529.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	11767	11979	.	+	.	ID=gene-CYJ03_RS10150;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CYJ03_RS10150;old_locus_tag=CYJ03_010140
NZ_PJUP02000031.1	Protein Homology	CDS	11767	11979	.	+	0	ID=cds-WP_014613343.1;Parent=gene-CYJ03_RS10150;Dbxref=GenBank:WP_014613343.1;Name=WP_014613343.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613343.1;locus_tag=CYJ03_RS10150;product=F0F1 ATP synthase subunit C;protein_id=WP_014613343.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	12140	12664	.	+	.	ID=gene-CYJ03_RS10155;Name=CYJ03_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10155;old_locus_tag=CYJ03_010145
NZ_PJUP02000031.1	Protein Homology	CDS	12140	12664	.	+	0	ID=cds-WP_096534009.1;Parent=gene-CYJ03_RS10155;Dbxref=GenBank:WP_096534009.1;Name=WP_096534009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CYJ03_RS10155;product=F0F1 ATP synthase subunit B;protein_id=WP_096534009.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	12664	13203	.	+	.	ID=gene-CYJ03_RS10160;Name=CYJ03_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10160;old_locus_tag=CYJ03_010150
NZ_PJUP02000031.1	Protein Homology	CDS	12664	13203	.	+	0	ID=cds-WP_037542533.1;Parent=gene-CYJ03_RS10160;Dbxref=GenBank:WP_037542533.1;Name=WP_037542533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729438.1;locus_tag=CYJ03_RS10160;product=F0F1 ATP synthase subunit delta;protein_id=WP_037542533.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	13230	14741	.	+	.	ID=gene-CYJ03_RS10165;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10165;old_locus_tag=CYJ03_010155
NZ_PJUP02000031.1	Protein Homology	CDS	13230	14741	.	+	0	ID=cds-WP_014613346.1;Parent=gene-CYJ03_RS10165;Dbxref=GenBank:WP_014613346.1;Name=WP_014613346.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=CYJ03_RS10165;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014613346.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	14779	15645	.	+	.	ID=gene-CYJ03_RS10170;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CYJ03_RS10170;old_locus_tag=CYJ03_010160
NZ_PJUP02000031.1	Protein Homology	CDS	14779	15645	.	+	0	ID=cds-WP_026067008.1;Parent=gene-CYJ03_RS10170;Dbxref=GenBank:WP_026067008.1;Name=WP_026067008.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302681.1;locus_tag=CYJ03_RS10170;product=ATP synthase F1 subunit gamma;protein_id=WP_026067008.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	15670	17082	.	+	.	ID=gene-CYJ03_RS10175;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10175;old_locus_tag=CYJ03_010165
NZ_PJUP02000031.1	Protein Homology	CDS	15670	17082	.	+	0	ID=cds-WP_014613348.1;Parent=gene-CYJ03_RS10175;Dbxref=GenBank:WP_014613348.1;Name=WP_014613348.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CYJ03_RS10175;product=F0F1 ATP synthase subunit beta;protein_id=WP_014613348.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	17105	17509	.	+	.	ID=gene-CYJ03_RS10180;Name=CYJ03_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10180;old_locus_tag=CYJ03_010170
NZ_PJUP02000031.1	Protein Homology	CDS	17105	17509	.	+	0	ID=cds-WP_014613349.1;Parent=gene-CYJ03_RS10180;Dbxref=GenBank:WP_014613349.1;Name=WP_014613349.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094394.1;locus_tag=CYJ03_RS10180;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_014613349.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	17902	18132	.	+	.	ID=gene-CYJ03_RS10185;Name=CYJ03_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10185;old_locus_tag=CYJ03_010175
NZ_PJUP02000031.1	Protein Homology	CDS	17902	18132	.	+	0	ID=cds-WP_014613350.1;Parent=gene-CYJ03_RS10185;Dbxref=GenBank:WP_014613350.1;Name=WP_014613350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613350.1;locus_tag=CYJ03_RS10185;product=DUF1146 family protein;protein_id=WP_014613350.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	18243	19508	.	+	.	ID=gene-CYJ03_RS10190;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10190;old_locus_tag=CYJ03_010180
NZ_PJUP02000031.1	Protein Homology	CDS	18243	19508	.	+	0	ID=cds-WP_063284937.1;Parent=gene-CYJ03_RS10190;Dbxref=GenBank:WP_063284937.1;Name=WP_063284937.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=CYJ03_RS10190;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_063284937.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	19501	19698	.	+	.	ID=gene-CYJ03_RS10195;Name=CYJ03_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10195;old_locus_tag=CYJ03_010185
NZ_PJUP02000031.1	Protein Homology	CDS	19501	19698	.	+	0	ID=cds-WP_226957593.1;Parent=gene-CYJ03_RS10195;Dbxref=GenBank:WP_226957593.1;Name=WP_226957593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=CYJ03_RS10195;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_226957593.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	19698	20141	.	+	.	ID=gene-CYJ03_RS10200;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS10200;old_locus_tag=CYJ03_010190
NZ_PJUP02000031.1	Protein Homology	CDS	19698	20141	.	+	0	ID=cds-WP_014613353.1;Parent=gene-CYJ03_RS10200;Dbxref=GenBank:WP_014613353.1;Name=WP_014613353.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426460.1;locus_tag=CYJ03_RS10200;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_014613353.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	20257	20691	.	-	.	ID=gene-CYJ03_RS10205;Name=CYJ03_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10205;old_locus_tag=CYJ03_010195
NZ_PJUP02000031.1	Protein Homology	CDS	20257	20691	.	-	0	ID=cds-WP_014613354.1;Parent=gene-CYJ03_RS10205;Dbxref=GenBank:WP_014613354.1;Name=WP_014613354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613354.1;locus_tag=CYJ03_RS10205;product=YwpF-like family protein;protein_id=WP_014613354.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	20872	21228	.	+	.	ID=gene-CYJ03_RS10210;Name=CYJ03_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10210;old_locus_tag=CYJ03_010200
NZ_PJUP02000031.1	Protein Homology	CDS	20872	21228	.	+	0	ID=cds-WP_015729436.1;Parent=gene-CYJ03_RS10210;Dbxref=GenBank:WP_015729436.1;Name=WP_015729436.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729436.1;locus_tag=CYJ03_RS10210;product=single-stranded DNA-binding protein;protein_id=WP_015729436.1;transl_table=11
NZ_PJUP02000031.1	cmsearch	riboswitch	21642	21745	.	+	.	ID=id-NZ_PJUP02000031.1:21642..21745;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000031.1	RefSeq	gene	21812	22495	.	+	.	ID=gene-CYJ03_RS10215;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10215;old_locus_tag=CYJ03_010205
NZ_PJUP02000031.1	Protein Homology	CDS	21812	22495	.	+	0	ID=cds-WP_014613356.1;Parent=gene-CYJ03_RS10215;Dbxref=GenBank:WP_014613356.1;Name=WP_014613356.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729435.1;locus_tag=CYJ03_RS10215;product=thiaminase II;protein_id=WP_014613356.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	22495	23301	.	+	.	ID=gene-CYJ03_RS10220;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10220;old_locus_tag=CYJ03_010210
NZ_PJUP02000031.1	Protein Homology	CDS	22495	23301	.	+	0	ID=cds-WP_014613357.1;Parent=gene-CYJ03_RS10220;Dbxref=GenBank:WP_014613357.1;Name=WP_014613357.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=CYJ03_RS10220;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014613357.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	23303	24106	.	+	.	ID=gene-CYJ03_RS10225;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CYJ03_RS10225;old_locus_tag=CYJ03_010215
NZ_PJUP02000031.1	Protein Homology	CDS	23303	24106	.	+	0	ID=cds-WP_014613358.1;Parent=gene-CYJ03_RS10225;Dbxref=GenBank:WP_014613358.1;Name=WP_014613358.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165813.1;locus_tag=CYJ03_RS10225;product=hydroxyethylthiazole kinase;protein_id=WP_014613358.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	24096	24734	.	+	.	ID=gene-CYJ03_RS10230;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CYJ03_RS10230;old_locus_tag=CYJ03_010220
NZ_PJUP02000031.1	Protein Homology	CDS	24096	24734	.	+	0	ID=cds-WP_063284943.1;Parent=gene-CYJ03_RS10230;Dbxref=GenBank:WP_063284943.1;Name=WP_063284943.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613359.1;locus_tag=CYJ03_RS10230;product=thiamine phosphate synthase;protein_id=WP_063284943.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	24823	25689	.	+	.	ID=gene-CYJ03_RS10235;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10235;old_locus_tag=CYJ03_010225
NZ_PJUP02000031.1	Protein Homology	CDS	24823	25689	.	+	0	ID=cds-WP_104052336.1;Parent=gene-CYJ03_RS10235;Dbxref=GenBank:WP_104052336.1;Name=WP_104052336.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729433.1;locus_tag=CYJ03_RS10235;product=membrane protein insertase YidC;protein_id=WP_104052336.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	25743	26399	.	-	.	ID=gene-CYJ03_RS10240;Name=CYJ03_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10240;old_locus_tag=CYJ03_010230
NZ_PJUP02000031.1	Protein Homology	CDS	25743	26399	.	-	0	ID=cds-WP_063279128.1;Parent=gene-CYJ03_RS10240;Dbxref=GenBank:WP_063279128.1;Name=WP_063279128.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165816.1;locus_tag=CYJ03_RS10240;product=HD domain-containing protein;protein_id=WP_063279128.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	26420	27910	.	-	.	ID=gene-CYJ03_RS10245;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CYJ03_RS10245;old_locus_tag=CYJ03_010235
NZ_PJUP02000031.1	Protein Homology	CDS	26420	27910	.	-	0	ID=cds-WP_065520420.1;Parent=gene-CYJ03_RS10245;Dbxref=GenBank:WP_065520420.1;Name=WP_065520420.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=CYJ03_RS10245;product=cardiolipin synthase;protein_id=WP_065520420.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	28042	28329	.	+	.	ID=gene-CYJ03_RS10250;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=CYJ03_RS10250;old_locus_tag=CYJ03_010240
NZ_PJUP02000031.1	Protein Homology	CDS	28042	28329	.	+	0	ID=cds-WP_014613363.1;Parent=gene-CYJ03_RS10250;Dbxref=GenBank:WP_014613363.1;Name=WP_014613363.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500801.1;locus_tag=CYJ03_RS10250;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_014613363.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	28342	28563	.	+	.	ID=gene-CYJ03_RS10255;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS10255;old_locus_tag=CYJ03_010245
NZ_PJUP02000031.1	Protein Homology	CDS	28342	28563	.	+	0	ID=cds-WP_014613364.1;Parent=gene-CYJ03_RS10255;Dbxref=GenBank:WP_014613364.1;Name=WP_014613364.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613364.1;locus_tag=CYJ03_RS10255;product=putative copper chaperone CsoZ;protein_id=WP_014613364.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	28567	28773	.	+	.	ID=gene-CYJ03_RS10260;Name=CYJ03_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10260;old_locus_tag=CYJ03_010250
NZ_PJUP02000031.1	Protein Homology	CDS	28567	28773	.	+	0	ID=cds-WP_014613365.1;Parent=gene-CYJ03_RS10260;Dbxref=GenBank:WP_014613365.1;Name=WP_014613365.1;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613365.1;locus_tag=CYJ03_RS10260;product=cation transporter;protein_id=WP_014613365.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	28874	31054	.	+	.	ID=gene-CYJ03_RS10265;Name=CYJ03_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10265;old_locus_tag=CYJ03_010255
NZ_PJUP02000031.1	Protein Homology	CDS	28874	31054	.	+	0	ID=cds-WP_063279127.1;Parent=gene-CYJ03_RS10265;Dbxref=GenBank:WP_063279127.1;Name=WP_063279127.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165821.1;locus_tag=CYJ03_RS10265;product=heavy metal translocating P-type ATPase;protein_id=WP_063279127.1;transl_table=11
NZ_PJUP02000031.1	RefSeq	gene	31140	31286	.	+	.	ID=gene-CYJ03_RS12340;Name=CYJ03_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12340
NZ_PJUP02000031.1	Protein Homology	CDS	31140	31286	.	+	0	ID=cds-WP_014613367.1;Parent=gene-CYJ03_RS12340;Dbxref=GenBank:WP_014613367.1;Name=WP_014613367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613367.1;locus_tag=CYJ03_RS12340;product=Lmo0850 family protein;protein_id=WP_014613367.1;transl_table=11
##sequence-region NZ_PJUP02000028.1 1 33068
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000028.1	RefSeq	region	1	33068	.	+	.	ID=NZ_PJUP02000028.1:1..33068;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000028.1	RefSeq	gene	336	539	.	+	.	ID=gene-CYJ03_RS09620;Name=CYJ03_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09620;old_locus_tag=CYJ03_009610
NZ_PJUP02000028.1	GeneMarkS-2+	CDS	336	539	.	+	0	ID=cds-WP_080556827.1;Parent=gene-CYJ03_RS09620;Dbxref=GenBank:WP_080556827.1;Name=WP_080556827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS09620;product=hypothetical protein;protein_id=WP_080556827.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	630	2063	.	-	.	ID=gene-CYJ03_RS09625;Name=CYJ03_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09625;old_locus_tag=CYJ03_009615
NZ_PJUP02000028.1	Protein Homology	CDS	630	2063	.	-	0	ID=cds-WP_014613328.1;Parent=gene-CYJ03_RS09625;Dbxref=GenBank:WP_014613328.1;Name=WP_014613328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165794.1;locus_tag=CYJ03_RS09625;product=aldehyde dehydrogenase family protein;protein_id=WP_014613328.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	2244	2573	.	-	.	ID=gene-CYJ03_RS09630;Name=CYJ03_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09630;old_locus_tag=CYJ03_009620
NZ_PJUP02000028.1	Protein Homology	CDS	2244	2573	.	-	0	ID=cds-WP_014613327.1;Parent=gene-CYJ03_RS09630;Dbxref=GenBank:WP_014613327.1;Name=WP_014613327.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613327.1;locus_tag=CYJ03_RS09630;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014613327.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	2621	3886	.	-	.	ID=gene-CYJ03_RS09635;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=CYJ03_RS09635;old_locus_tag=CYJ03_009625
NZ_PJUP02000028.1	Protein Homology	CDS	2621	3886	.	-	0	ID=cds-WP_014613326.1;Parent=gene-CYJ03_RS09635;Dbxref=GenBank:WP_014613326.1;Name=WP_014613326.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=CYJ03_RS09635;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_014613326.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	4231	5103	.	-	.	ID=gene-CYJ03_RS09640;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09640;old_locus_tag=CYJ03_009630
NZ_PJUP02000028.1	Protein Homology	CDS	4231	5103	.	-	0	ID=cds-WP_015729446.1;Parent=gene-CYJ03_RS09640;Dbxref=GenBank:WP_015729446.1;Name=WP_015729446.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=CYJ03_RS09640;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_015729446.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	5368	5892	.	+	.	ID=gene-CYJ03_RS09645;Name=CYJ03_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09645;old_locus_tag=CYJ03_009635
NZ_PJUP02000028.1	Protein Homology	CDS	5368	5892	.	+	0	ID=cds-WP_014613324.1;Parent=gene-CYJ03_RS09645;Dbxref=GenBank:WP_014613324.1;Name=WP_014613324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613324.1;locus_tag=CYJ03_RS09645;product=DUF2529 family protein;protein_id=WP_014613324.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	6027	6188	.	-	.	ID=gene-CYJ03_RS12325;Name=CYJ03_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12325
NZ_PJUP02000028.1	Protein Homology	CDS	6027	6188	.	-	0	ID=cds-WP_181137786.1;Parent=gene-CYJ03_RS12325;Dbxref=GenBank:WP_181137786.1;Name=WP_181137786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613323.1;locus_tag=CYJ03_RS12325;product=hypothetical protein;protein_id=WP_181137786.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	6317	7675	.	-	.	ID=gene-CYJ03_RS09650;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CYJ03_RS09650;old_locus_tag=CYJ03_009640
NZ_PJUP02000028.1	Protein Homology	CDS	6317	7675	.	-	0	ID=cds-WP_065354115.1;Parent=gene-CYJ03_RS09650;Dbxref=GenBank:WP_065354115.1;Name=WP_065354115.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613322.1;locus_tag=CYJ03_RS09650;product=glycerol-3-phosphate transporter;protein_id=WP_065354115.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	8115	9728	.	-	.	ID=gene-CYJ03_RS09655;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CYJ03_RS09655;old_locus_tag=CYJ03_009645
NZ_PJUP02000028.1	Protein Homology	CDS	8115	9728	.	-	0	ID=cds-WP_104052329.1;Parent=gene-CYJ03_RS09655;Dbxref=GenBank:WP_104052329.1;Name=WP_104052329.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613321.1;locus_tag=CYJ03_RS09655;product=CTP synthase;protein_id=WP_104052329.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	10138	10680	.	-	.	ID=gene-CYJ03_RS09660;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CYJ03_RS09660;old_locus_tag=CYJ03_009650
NZ_PJUP02000028.1	Protein Homology	CDS	10138	10680	.	-	0	ID=cds-WP_014613320.1;Parent=gene-CYJ03_RS09660;Dbxref=GenBank:WP_014613320.1;Name=WP_014613320.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=CYJ03_RS09660;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_014613320.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	10949	11812	.	-	.	ID=gene-CYJ03_RS09665;Name=CYJ03_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09665;old_locus_tag=CYJ03_009655
NZ_PJUP02000028.1	Protein Homology	CDS	10949	11812	.	-	0	ID=cds-WP_014613318.1;Parent=gene-CYJ03_RS09665;Dbxref=GenBank:WP_014613318.1;Name=WP_014613318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165785.1;locus_tag=CYJ03_RS09665;product=GNAT family N-acetyltransferase;protein_id=WP_014613318.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	11983	13575	.	+	.	ID=gene-CYJ03_RS09670;Name=CYJ03_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09670;old_locus_tag=CYJ03_009660
NZ_PJUP02000028.1	Protein Homology	CDS	11983	13575	.	+	0	ID=cds-WP_014613317.1;Parent=gene-CYJ03_RS09670;Dbxref=GenBank:WP_014613317.1;Name=WP_014613317.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=CYJ03_RS09670;product=BCCT family transporter;protein_id=WP_014613317.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	14339	14503	.	-	.	ID=gene-CYJ03_RS12330;Name=CYJ03_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12330
NZ_PJUP02000028.1	Protein Homology	CDS	14339	14503	.	-	0	ID=cds-WP_014613316.1;Parent=gene-CYJ03_RS12330;Dbxref=GenBank:WP_014613316.1;Name=WP_014613316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613316.1;locus_tag=CYJ03_RS12330;product=hypothetical protein;protein_id=WP_014613316.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	14629	15426	.	+	.	ID=gene-CYJ03_RS09675;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=CYJ03_RS09675;old_locus_tag=CYJ03_009665
NZ_PJUP02000028.1	Protein Homology	CDS	14629	15426	.	+	0	ID=cds-WP_014613315.1;Parent=gene-CYJ03_RS09675;Dbxref=GenBank:WP_014613315.1;Name=WP_014613315.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=CYJ03_RS09675;product=type II pantothenate kinase;protein_id=WP_014613315.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	15836	16507	.	-	.	ID=gene-CYJ03_RS09680;Name=CYJ03_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09680;old_locus_tag=CYJ03_009670
NZ_PJUP02000028.1	Protein Homology	CDS	15836	16507	.	-	0	ID=cds-WP_014613313.1;Parent=gene-CYJ03_RS09680;Dbxref=GenBank:WP_014613313.1;Name=WP_014613313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=CYJ03_RS09680;product=DUF2750 domain-containing protein;protein_id=WP_014613313.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	16624	17814	.	-	.	ID=gene-CYJ03_RS09685;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=CYJ03_RS09685;old_locus_tag=CYJ03_009675
NZ_PJUP02000028.1	Protein Homology	CDS	16624	17814	.	-	0	ID=cds-WP_101457200.1;Parent=gene-CYJ03_RS09685;Dbxref=GenBank:WP_101457200.1;Name=WP_101457200.1;Ontology_term=GO:0006555,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=CYJ03_RS09685;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_101457200.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	17817	18935	.	-	.	ID=gene-CYJ03_RS09690;Name=CYJ03_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09690;old_locus_tag=CYJ03_009680
NZ_PJUP02000028.1	Protein Homology	CDS	17817	18935	.	-	0	ID=cds-WP_051144746.1;Parent=gene-CYJ03_RS09690;Dbxref=GenBank:WP_051144746.1;Name=WP_051144746.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169567.1;locus_tag=CYJ03_RS09690;product=M20 family metallopeptidase;protein_id=WP_051144746.1;transl_table=11
NZ_PJUP02000028.1	cmsearch	riboswitch	19100	19205	.	-	.	ID=id-NZ_PJUP02000028.1:19100..19205;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000028.1	RefSeq	gene	19501	19971	.	+	.	ID=gene-CYJ03_RS09695;Name=CYJ03_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09695;old_locus_tag=CYJ03_009685
NZ_PJUP02000028.1	Protein Homology	CDS	19501	19971	.	+	0	ID=cds-WP_014613310.1;Parent=gene-CYJ03_RS09695;Dbxref=GenBank:WP_014613310.1;Name=WP_014613310.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CYJ03_RS09695;product=S-ribosylhomocysteine lyase;protein_id=WP_014613310.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	20033	20386	.	-	.	ID=gene-CYJ03_RS09700;Name=CYJ03_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09700;old_locus_tag=CYJ03_009690
NZ_PJUP02000028.1	Protein Homology	CDS	20033	20386	.	-	0	ID=cds-WP_014613309.1;Parent=gene-CYJ03_RS09700;Dbxref=GenBank:WP_014613309.1;Name=WP_014613309.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=CYJ03_RS09700;product=DoxX family protein;protein_id=WP_014613309.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	20398	21699	.	-	.	ID=gene-CYJ03_RS09705;Name=CYJ03_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09705;old_locus_tag=CYJ03_009695
NZ_PJUP02000028.1	Protein Homology	CDS	20398	21699	.	-	0	ID=cds-WP_065354110.1;Parent=gene-CYJ03_RS09705;Dbxref=GenBank:WP_065354110.1;Name=WP_065354110.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500854.1;locus_tag=CYJ03_RS09705;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_065354110.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	21915	22625	.	+	.	ID=gene-CYJ03_RS09710;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09710;old_locus_tag=CYJ03_009700
NZ_PJUP02000028.1	Protein Homology	CDS	21915	22625	.	+	0	ID=cds-WP_015729454.1;Parent=gene-CYJ03_RS09710;Dbxref=GenBank:WP_015729454.1;Name=WP_015729454.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CYJ03_RS09710;product=purine-nucleoside phosphorylase;protein_id=WP_015729454.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	22855	23259	.	-	.	ID=gene-CYJ03_RS09715;Name=CYJ03_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09715;old_locus_tag=CYJ03_009705
NZ_PJUP02000028.1	Protein Homology	CDS	22855	23259	.	-	0	ID=cds-WP_014613306.1;Parent=gene-CYJ03_RS09715;Dbxref=GenBank:WP_014613306.1;Name=WP_014613306.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165774.1;locus_tag=CYJ03_RS09715;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_014613306.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	23324	24754	.	-	.	ID=gene-CYJ03_RS09720;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CYJ03_RS09720;old_locus_tag=CYJ03_009710
NZ_PJUP02000028.1	Protein Homology	CDS	23324	24754	.	-	0	ID=cds-WP_063279103.1;Parent=gene-CYJ03_RS09720;Dbxref=GenBank:WP_063279103.1;Name=WP_063279103.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613305.1;locus_tag=CYJ03_RS09720;product=Na+/H+ antiporter NhaC;protein_id=WP_063279103.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	25484	26848	.	-	.	ID=gene-CYJ03_RS09730;Name=CYJ03_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09730;old_locus_tag=CYJ03_009720
NZ_PJUP02000028.1	Protein Homology	CDS	25484	26848	.	-	0	ID=cds-WP_101458389.1;Parent=gene-CYJ03_RS09730;Dbxref=GenBank:WP_101458389.1;Name=WP_101458389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=CYJ03_RS09730;product=EVE domain-containing protein;protein_id=WP_101458389.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	26925	27161	.	-	.	ID=gene-CYJ03_RS09735;Name=CYJ03_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09735;old_locus_tag=CYJ03_009725
NZ_PJUP02000028.1	Protein Homology	CDS	26925	27161	.	-	0	ID=cds-WP_014613303.1;Parent=gene-CYJ03_RS09735;Dbxref=GenBank:WP_014613303.1;Name=WP_014613303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729458.1;locus_tag=CYJ03_RS09735;product=hypothetical protein;protein_id=WP_014613303.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	27178	28116	.	-	.	ID=gene-CYJ03_RS09740;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09740;old_locus_tag=CYJ03_009730
NZ_PJUP02000028.1	Protein Homology	CDS	27178	28116	.	-	0	ID=cds-WP_014613302.1;Parent=gene-CYJ03_RS09740;Dbxref=GenBank:WP_014613302.1;Name=WP_014613302.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=CYJ03_RS09740;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_014613302.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	28523	29227	.	-	.	ID=gene-CYJ03_RS09745;Name=CYJ03_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09745;old_locus_tag=CYJ03_009735
NZ_PJUP02000028.1	Protein Homology	CDS	28523	29227	.	-	0	ID=cds-WP_101458390.1;Parent=gene-CYJ03_RS09745;Dbxref=GenBank:WP_101458390.1;Name=WP_101458390.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169556.1;locus_tag=CYJ03_RS09745;product=FadR/GntR family transcriptional regulator;protein_id=WP_101458390.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	29413	30318	.	+	.	ID=gene-CYJ03_RS09750;Name=CYJ03_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09750;old_locus_tag=CYJ03_009740
NZ_PJUP02000028.1	Protein Homology	CDS	29413	30318	.	+	0	ID=cds-WP_014613300.1;Parent=gene-CYJ03_RS09750;Dbxref=GenBank:WP_014613300.1;Name=WP_014613300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169555.1;locus_tag=CYJ03_RS09750;product=lytic transglycosylase;protein_id=WP_014613300.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	30871	31725	.	-	.	ID=gene-CYJ03_RS09755;Name=CYJ03_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09755;old_locus_tag=CYJ03_009745
NZ_PJUP02000028.1	Protein Homology	CDS	30871	31725	.	-	0	ID=cds-WP_103263638.1;Parent=gene-CYJ03_RS09755;Dbxref=GenBank:WP_103263638.1;Name=WP_103263638.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729462.1;locus_tag=CYJ03_RS09755;product=HAD family hydrolase;protein_id=WP_103263638.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	31800	32579	.	-	.	ID=gene-CYJ03_RS09760;Name=CYJ03_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09760;old_locus_tag=CYJ03_009750
NZ_PJUP02000028.1	Protein Homology	CDS	31800	32579	.	-	0	ID=cds-WP_104052330.1;Parent=gene-CYJ03_RS09760;Dbxref=GenBank:WP_104052330.1;Name=WP_104052330.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=CYJ03_RS09760;product=ABC transporter ATP-binding protein;protein_id=WP_104052330.1;transl_table=11
NZ_PJUP02000028.1	RefSeq	gene	32687	32953	.	-	.	ID=gene-CYJ03_RS09765;Name=CYJ03_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09765;old_locus_tag=CYJ03_009755
NZ_PJUP02000028.1	Protein Homology	CDS	32687	32953	.	-	0	ID=cds-WP_101458445.1;Parent=gene-CYJ03_RS09765;Dbxref=GenBank:WP_101458445.1;Name=WP_101458445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219855.1;locus_tag=CYJ03_RS09765;product=hypothetical protein;protein_id=WP_101458445.1;transl_table=11
##sequence-region NZ_PJUP02000027.1 1 34000
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000027.1	RefSeq	region	1	34000	.	+	.	ID=NZ_PJUP02000027.1:1..34000;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000027.1	RefSeq	pseudogene	1	656	.	+	.	ID=gene-CYJ03_RS09485;Name=CYJ03_RS09485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS09485;old_locus_tag=CYJ03_009475;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000027.1	Protein Homology	CDS	1	656	.	+	2	ID=cds-CYJ03_RS09485;Parent=gene-CYJ03_RS09485;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439285.1;locus_tag=CYJ03_RS09485;partial=true;product=isochorismate synthase;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	649	2319	.	+	.	ID=gene-CYJ03_RS09490;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CYJ03_RS09490;old_locus_tag=CYJ03_009480
NZ_PJUP02000027.1	Protein Homology	CDS	649	2319	.	+	0	ID=cds-WP_104052320.1;Parent=gene-CYJ03_RS09490;Dbxref=GenBank:WP_104052320.1;Name=WP_104052320.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165634.1;locus_tag=CYJ03_RS09490;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_104052320.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	2306	3097	.	+	.	ID=gene-CYJ03_RS09495;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CYJ03_RS09495;old_locus_tag=CYJ03_009485
NZ_PJUP02000027.1	Protein Homology	CDS	2306	3097	.	+	0	ID=cds-WP_104052321.1;Parent=gene-CYJ03_RS09495;Dbxref=GenBank:WP_104052321.1;Name=WP_104052321.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220255.1;locus_tag=CYJ03_RS09495;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_104052321.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	3114	3932	.	+	.	ID=gene-CYJ03_RS09500;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09500;old_locus_tag=CYJ03_009490
NZ_PJUP02000027.1	Protein Homology	CDS	3114	3932	.	+	0	ID=cds-WP_014614316.1;Parent=gene-CYJ03_RS09500;Dbxref=GenBank:WP_014614316.1;Name=WP_014614316.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CYJ03_RS09500;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014614316.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	4122	5282	.	-	.	ID=gene-CYJ03_RS09505;Name=CYJ03_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09505;old_locus_tag=CYJ03_009495
NZ_PJUP02000027.1	Protein Homology	CDS	4122	5282	.	-	0	ID=cds-WP_063278799.1;Parent=gene-CYJ03_RS09505;Dbxref=GenBank:WP_063278799.1;Name=WP_063278799.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165632.1;locus_tag=CYJ03_RS09505;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_063278799.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	5397	6407	.	-	.	ID=gene-CYJ03_RS09510;Name=CYJ03_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09510;old_locus_tag=CYJ03_009500
NZ_PJUP02000027.1	Protein Homology	CDS	5397	6407	.	-	0	ID=cds-WP_063278798.1;Parent=gene-CYJ03_RS09510;Dbxref=GenBank:WP_063278798.1;Name=WP_063278798.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=CYJ03_RS09510;product=acyltransferase family protein;protein_id=WP_063278798.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	6766	8571	.	+	.	ID=gene-CYJ03_RS09515;Name=CYJ03_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09515;old_locus_tag=CYJ03_009505
NZ_PJUP02000027.1	Protein Homology	CDS	6766	8571	.	+	0	ID=cds-WP_104052322.1;Parent=gene-CYJ03_RS09515;Dbxref=GenBank:WP_104052322.1;Name=WP_104052322.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614313.1;locus_tag=CYJ03_RS09515;product=acyltransferase family protein;protein_id=WP_104052322.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	9016	13182	.	-	.	ID=gene-CYJ03_RS09520;Name=CYJ03_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09520;old_locus_tag=CYJ03_009510
NZ_PJUP02000027.1	Protein Homology	CDS	9016	13182	.	-	0	ID=cds-WP_104052323.1;Parent=gene-CYJ03_RS09520;Dbxref=GenBank:WP_104052323.1;Name=WP_104052323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614312.1;locus_tag=CYJ03_RS09520;product=GW dipeptide domain-containing protein;protein_id=WP_104052323.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	13511	13939	.	-	.	ID=gene-CYJ03_RS09525;Name=CYJ03_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09525;old_locus_tag=CYJ03_009515
NZ_PJUP02000027.1	Protein Homology	CDS	13511	13939	.	-	0	ID=cds-WP_014614311.1;Parent=gene-CYJ03_RS09525;Dbxref=GenBank:WP_014614311.1;Name=WP_014614311.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614311.1;locus_tag=CYJ03_RS09525;product=GNAT family N-acetyltransferase;protein_id=WP_014614311.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	14134	14604	.	-	.	ID=gene-CYJ03_RS09530;Name=CYJ03_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09530;old_locus_tag=CYJ03_009520
NZ_PJUP02000027.1	Protein Homology	CDS	14134	14604	.	-	0	ID=cds-WP_065354434.1;Parent=gene-CYJ03_RS09530;Dbxref=GenBank:WP_065354434.1;Name=WP_065354434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=CYJ03_RS09530;product=DUF2538 family protein;protein_id=WP_065354434.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	14619	15797	.	-	.	ID=gene-CYJ03_RS09535;Name=CYJ03_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09535;old_locus_tag=CYJ03_009525
NZ_PJUP02000027.1	Protein Homology	CDS	14619	15797	.	-	0	ID=cds-WP_014614309.1;Parent=gene-CYJ03_RS09535;Dbxref=GenBank:WP_014614309.1;Name=WP_014614309.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220253.1;locus_tag=CYJ03_RS09535;product=LCP family protein;protein_id=WP_014614309.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	16029	17672	.	+	.	ID=gene-CYJ03_RS09540;Name=CYJ03_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09540;old_locus_tag=CYJ03_009530
NZ_PJUP02000027.1	Protein Homology	CDS	16029	17672	.	+	0	ID=cds-WP_014614307.1;Parent=gene-CYJ03_RS09540;Dbxref=GenBank:WP_014614307.1;Name=WP_014614307.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614307.1;locus_tag=CYJ03_RS09540;product=phospho-sugar mutase;protein_id=WP_014614307.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	17867	18904	.	-	.	ID=gene-CYJ03_RS09545;Name=CYJ03_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09545;old_locus_tag=CYJ03_009535
NZ_PJUP02000027.1	Protein Homology	CDS	17867	18904	.	-	0	ID=cds-WP_104052324.1;Parent=gene-CYJ03_RS09545;Dbxref=GenBank:WP_104052324.1;Name=WP_104052324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165626.1;locus_tag=CYJ03_RS09545;product=SH3 domain-containing protein;protein_id=WP_104052324.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	19393	19827	.	+	.	ID=gene-CYJ03_RS09550;Name=CYJ03_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09550;old_locus_tag=CYJ03_009540
NZ_PJUP02000027.1	GeneMarkS-2+	CDS	19393	19827	.	+	0	ID=cds-WP_104052325.1;Parent=gene-CYJ03_RS09550;Dbxref=GenBank:WP_104052325.1;Name=WP_104052325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS09550;product=hypothetical protein;protein_id=WP_104052325.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	19862	20374	.	+	.	ID=gene-CYJ03_RS09555;Name=CYJ03_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09555;old_locus_tag=CYJ03_009545
NZ_PJUP02000027.1	GeneMarkS-2+	CDS	19862	20374	.	+	0	ID=cds-WP_104052326.1;Parent=gene-CYJ03_RS09555;Dbxref=GenBank:WP_104052326.1;Name=WP_104052326.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS09555;product=glycoside hydrolase family 19 protein;protein_id=WP_104052326.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	20392	21021	.	+	.	ID=gene-CYJ03_RS09560;Name=CYJ03_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09560;old_locus_tag=CYJ03_009550
NZ_PJUP02000027.1	Protein Homology	CDS	20392	21021	.	+	0	ID=cds-WP_104052327.1;Parent=gene-CYJ03_RS09560;Dbxref=GenBank:WP_104052327.1;Name=WP_104052327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=CYJ03_RS09560;product=SH3 domain-containing protein;protein_id=WP_104052327.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	21473	22747	.	+	.	ID=gene-CYJ03_RS09565;Name=CYJ03_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09565;old_locus_tag=CYJ03_009555
NZ_PJUP02000027.1	Protein Homology	CDS	21473	22747	.	+	0	ID=cds-WP_014614306.1;Parent=gene-CYJ03_RS09565;Dbxref=GenBank:WP_014614306.1;Name=WP_014614306.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728936.1;locus_tag=CYJ03_RS09565;product=nucleotide sugar dehydrogenase;protein_id=WP_014614306.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	22878	23810	.	+	.	ID=gene-CYJ03_RS09570;Name=CYJ03_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09570;old_locus_tag=CYJ03_009560
NZ_PJUP02000027.1	Protein Homology	CDS	22878	23810	.	+	0	ID=cds-WP_014614305.1;Parent=gene-CYJ03_RS09570;Dbxref=GenBank:WP_014614305.1;Name=WP_014614305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=CYJ03_RS09570;product=hypothetical protein;protein_id=WP_014614305.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	23812	26373	.	+	.	ID=gene-CYJ03_RS09575;Name=CYJ03_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09575;old_locus_tag=CYJ03_009565
NZ_PJUP02000027.1	Protein Homology	CDS	23812	26373	.	+	0	ID=cds-WP_014614304.1;Parent=gene-CYJ03_RS09575;Dbxref=GenBank:WP_014614304.1;Name=WP_014614304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=CYJ03_RS09575;product=glycosyltransferase;protein_id=WP_014614304.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	26386	28254	.	+	.	ID=gene-CYJ03_RS09580;Name=CYJ03_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09580;old_locus_tag=CYJ03_009570
NZ_PJUP02000027.1	Protein Homology	CDS	26386	28254	.	+	0	ID=cds-WP_230314568.1;Parent=gene-CYJ03_RS09580;Dbxref=GenBank:WP_230314568.1;Name=WP_230314568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=CYJ03_RS09580;product=hypothetical protein;protein_id=WP_230314568.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	28251	29060	.	+	.	ID=gene-CYJ03_RS09585;Name=CYJ03_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09585;old_locus_tag=CYJ03_009575
NZ_PJUP02000027.1	Protein Homology	CDS	28251	29060	.	+	0	ID=cds-WP_014614302.1;Parent=gene-CYJ03_RS09585;Dbxref=GenBank:WP_014614302.1;Name=WP_014614302.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=CYJ03_RS09585;product=ABC transporter permease;protein_id=WP_014614302.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	29072	30262	.	+	.	ID=gene-CYJ03_RS09590;Name=CYJ03_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09590;old_locus_tag=CYJ03_009580
NZ_PJUP02000027.1	Protein Homology	CDS	29072	30262	.	+	0	ID=cds-WP_101431322.1;Parent=gene-CYJ03_RS09590;Dbxref=GenBank:WP_101431322.1;Name=WP_101431322.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=CYJ03_RS09590;product=glycosyltransferase family 4 protein;protein_id=WP_101431322.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	30268	31188	.	+	.	ID=gene-CYJ03_RS09595;Name=CYJ03_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09595;old_locus_tag=CYJ03_009585
NZ_PJUP02000027.1	Protein Homology	CDS	30268	31188	.	+	0	ID=cds-WP_014614300.1;Parent=gene-CYJ03_RS09595;Dbxref=GenBank:WP_014614300.1;Name=WP_014614300.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614300.1;locus_tag=CYJ03_RS09595;product=ABC transporter ATP-binding protein;protein_id=WP_014614300.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	31208	32023	.	+	.	ID=gene-CYJ03_RS09600;Name=CYJ03_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09600;old_locus_tag=CYJ03_009590
NZ_PJUP02000027.1	Protein Homology	CDS	31208	32023	.	+	0	ID=cds-WP_101431321.1;Parent=gene-CYJ03_RS09600;Dbxref=GenBank:WP_101431321.1;Name=WP_101431321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=CYJ03_RS09600;product=glycosyl transferase;protein_id=WP_101431321.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	32071	33402	.	+	.	ID=gene-CYJ03_RS09605;Name=CYJ03_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09605;old_locus_tag=CYJ03_009595
NZ_PJUP02000027.1	Protein Homology	CDS	32071	33402	.	+	0	ID=cds-WP_104052328.1;Parent=gene-CYJ03_RS09605;Dbxref=GenBank:WP_104052328.1;Name=WP_104052328.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=CYJ03_RS09605;product=glycosyltransferase;protein_id=WP_104052328.1;transl_table=11
NZ_PJUP02000027.1	RefSeq	gene	33512	33946	.	+	.	ID=gene-CYJ03_RS09610;Name=CYJ03_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09610;old_locus_tag=CYJ03_009600
NZ_PJUP02000027.1	Protein Homology	CDS	33512	33946	.	+	0	ID=cds-WP_258058114.1;Parent=gene-CYJ03_RS09610;Dbxref=GenBank:WP_258058114.1;Name=WP_258058114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.7;locus_tag=CYJ03_RS09610;product=PepSY domain-containing protein;protein_id=WP_258058114.1;transl_table=11
##sequence-region NZ_PJUP02000035.1 1 28594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000035.1	RefSeq	region	1	28594	.	+	.	ID=NZ_PJUP02000035.1:1..28594;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000035.1	RefSeq	pseudogene	1	99	.	+	.	ID=gene-CYJ03_RS12675;Name=CYJ03_RS12675;end_range=99,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12675;old_locus_tag=CYJ03_010720;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000035.1	Protein Homology	CDS	1	99	.	+	0	ID=cds-CYJ03_RS12675;Parent=gene-CYJ03_RS12675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=99,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422918.1;locus_tag=CYJ03_RS12675;partial=true;product=nitroreductase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	366	1322	.	-	.	ID=gene-CYJ03_RS10735;Name=CYJ03_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10735;old_locus_tag=CYJ03_010725
NZ_PJUP02000035.1	Protein Homology	CDS	366	1322	.	-	0	ID=cds-WP_157929458.1;Parent=gene-CYJ03_RS10735;Dbxref=GenBank:WP_157929458.1;Name=WP_157929458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012879.7;locus_tag=CYJ03_RS10735;product=insulinase family protein;protein_id=WP_157929458.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	1325	2422	.	-	.	ID=gene-CYJ03_RS10740;Name=CYJ03_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10740;old_locus_tag=CYJ03_010730
NZ_PJUP02000035.1	GeneMarkS-2+	CDS	1325	2422	.	-	0	ID=cds-WP_063284955.1;Parent=gene-CYJ03_RS10740;Dbxref=GenBank:WP_063284955.1;Name=WP_063284955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS10740;product=insulinase family protein;protein_id=WP_063284955.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	2409	3422	.	-	.	ID=gene-CYJ03_RS12235;Name=CYJ03_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12235;old_locus_tag=CYJ03_010735
NZ_PJUP02000035.1	GeneMarkS-2+	CDS	2409	3422	.	-	0	ID=cds-WP_136084090.1;Parent=gene-CYJ03_RS12235;Dbxref=GenBank:WP_136084090.1;Name=WP_136084090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12235;product=hypothetical protein;protein_id=WP_136084090.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	3670	4368	.	-	.	ID=gene-CYJ03_RS10750;Name=CYJ03_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10750;old_locus_tag=CYJ03_010740
NZ_PJUP02000035.1	Protein Homology	CDS	3670	4368	.	-	0	ID=cds-WP_015728576.1;Parent=gene-CYJ03_RS10750;Dbxref=GenBank:WP_015728576.1;Name=WP_015728576.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CYJ03_RS10750;product=ATP-binding cassette domain-containing protein;protein_id=WP_015728576.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	4533	5066	.	-	.	ID=gene-CYJ03_RS12680;Name=CYJ03_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12680
NZ_PJUP02000035.1	Protein Homology	CDS	4533	5066	.	-	0	ID=cds-WP_015728577.1;Parent=gene-CYJ03_RS12680;Dbxref=GenBank:WP_015728577.1;Name=WP_015728577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=CYJ03_RS12680;product=SPASM domain-containing protein;protein_id=WP_015728577.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	5096	5512	.	-	.	ID=gene-CYJ03_RS12685;Name=CYJ03_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12685
NZ_PJUP02000035.1	Protein Homology	CDS	5096	5512	.	-	0	ID=cds-WP_241900538.1;Parent=gene-CYJ03_RS12685;Dbxref=GenBank:WP_241900538.1;Name=WP_241900538.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF015983.7;locus_tag=CYJ03_RS12685;product=radical SAM protein;protein_id=WP_241900538.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	5553	5867	.	-	.	ID=gene-CYJ03_RS12690;Name=CYJ03_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12690
NZ_PJUP02000035.1	GeneMarkS-2+	CDS	5553	5867	.	-	0	ID=cds-WP_241900539.1;Parent=gene-CYJ03_RS12690;Dbxref=GenBank:WP_241900539.1;Name=WP_241900539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12690;product=hypothetical protein;protein_id=WP_241900539.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	5945	6076	.	-	.	ID=gene-CYJ03_RS10760;Name=CYJ03_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10760;old_locus_tag=CYJ03_010750
NZ_PJUP02000035.1	Protein Homology	CDS	5945	6076	.	-	0	ID=cds-WP_037544023.1;Parent=gene-CYJ03_RS10760;Dbxref=GenBank:WP_037544023.1;Name=WP_037544023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361779.1;locus_tag=CYJ03_RS10760;product=subtilosin A family bacteriocin;protein_id=WP_037544023.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	6202	6840	.	+	.	ID=gene-CYJ03_RS10765;Name=CYJ03_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10765;old_locus_tag=CYJ03_010755
NZ_PJUP02000035.1	Protein Homology	CDS	6202	6840	.	+	0	ID=cds-WP_015728579.1;Parent=gene-CYJ03_RS10765;Dbxref=GenBank:WP_015728579.1;Name=WP_015728579.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=CYJ03_RS10765;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015728579.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	7361	7897	.	+	.	ID=gene-CYJ03_RS10770;Name=CYJ03_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10770;old_locus_tag=CYJ03_010760
NZ_PJUP02000035.1	Protein Homology	CDS	7361	7897	.	+	0	ID=cds-WP_228064230.1;Parent=gene-CYJ03_RS10770;Dbxref=GenBank:WP_228064230.1;Name=WP_228064230.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.7;locus_tag=CYJ03_RS10770;product=transposase;protein_id=WP_228064230.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	7901	8221	.	+	.	ID=gene-CYJ03_RS10775;Name=CYJ03_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10775;old_locus_tag=CYJ03_010765
NZ_PJUP02000035.1	Protein Homology	CDS	7901	8221	.	+	0	ID=cds-WP_070407722.1;Parent=gene-CYJ03_RS10775;Dbxref=GenBank:WP_070407722.1;Name=WP_070407722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025126.7;locus_tag=CYJ03_RS10775;product=transposase;protein_id=WP_070407722.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	8288	10549	.	-	.	ID=gene-CYJ03_RS10780;Name=CYJ03_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10780;old_locus_tag=CYJ03_010770
NZ_PJUP02000035.1	Protein Homology	CDS	8288	10549	.	-	0	ID=cds-WP_104052355.1;Parent=gene-CYJ03_RS10780;Dbxref=GenBank:WP_104052355.1;Name=WP_104052355.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166373.1;locus_tag=CYJ03_RS10780;product=ATP-binding cassette domain-containing protein;protein_id=WP_104052355.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	10598	11371	.	-	.	ID=gene-CYJ03_RS10785;Name=CYJ03_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10785;old_locus_tag=CYJ03_010775
NZ_PJUP02000035.1	Protein Homology	CDS	10598	11371	.	-	0	ID=cds-WP_014614837.1;Parent=gene-CYJ03_RS10785;Dbxref=GenBank:WP_014614837.1;Name=WP_014614837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=CYJ03_RS10785;product=YibE/F family protein;protein_id=WP_014614837.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	11368	12477	.	-	.	ID=gene-CYJ03_RS10790;Name=CYJ03_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10790;old_locus_tag=CYJ03_010780
NZ_PJUP02000035.1	Protein Homology	CDS	11368	12477	.	-	0	ID=cds-WP_063284949.1;Parent=gene-CYJ03_RS10790;Dbxref=GenBank:WP_063284949.1;Name=WP_063284949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614836.1;locus_tag=CYJ03_RS10790;product=YibE/F family protein;protein_id=WP_063284949.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	12490	13368	.	-	.	ID=gene-CYJ03_RS10795;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10795;old_locus_tag=CYJ03_010785
NZ_PJUP02000035.1	Protein Homology	CDS	12490	13368	.	-	0	ID=cds-WP_020220086.1;Parent=gene-CYJ03_RS10795;Dbxref=GenBank:WP_020220086.1;Name=WP_020220086.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=CYJ03_RS10795;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_020220086.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	13491	17996	.	+	.	ID=gene-CYJ03_RS10800;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10800;old_locus_tag=CYJ03_010790
NZ_PJUP02000035.1	Protein Homology	CDS	13491	17996	.	+	0	ID=cds-WP_101457517.1;Parent=gene-CYJ03_RS10800;Dbxref=GenBank:WP_101457517.1;Name=WP_101457517.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363067.1;locus_tag=CYJ03_RS10800;product=glutamate synthase large subunit;protein_id=WP_101457517.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	18009	19466	.	+	.	ID=gene-CYJ03_RS10805;Name=CYJ03_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10805;old_locus_tag=CYJ03_010795
NZ_PJUP02000035.1	Protein Homology	CDS	18009	19466	.	+	0	ID=cds-WP_101457518.1;Parent=gene-CYJ03_RS10805;Dbxref=GenBank:WP_101457518.1;Name=WP_101457518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503578.1;locus_tag=CYJ03_RS10805;product=glutamate synthase subunit beta;protein_id=WP_101457518.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	19533	19625	.	+	.	ID=gene-CYJ03_RS10810;Name=CYJ03_RS10810;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS10810;old_locus_tag=CYJ03_010800
NZ_PJUP02000035.1	tRNAscan-SE	tRNA	19533	19625	.	+	.	ID=rna-CYJ03_RS10810;Parent=gene-CYJ03_RS10810;anticodon=(pos:19569..19571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10810;product=tRNA-Ser
NZ_PJUP02000035.1	tRNAscan-SE	exon	19533	19625	.	+	.	ID=exon-CYJ03_RS10810-1;Parent=rna-CYJ03_RS10810;anticodon=(pos:19569..19571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS10810;product=tRNA-Ser
NZ_PJUP02000035.1	RefSeq	gene	19945	21381	.	+	.	ID=gene-CYJ03_RS10820;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=CYJ03_RS10820;old_locus_tag=CYJ03_010810
NZ_PJUP02000035.1	Protein Homology	CDS	19945	21381	.	+	0	ID=cds-WP_014614832.1;Parent=gene-CYJ03_RS10820;Dbxref=GenBank:WP_014614832.1;Name=WP_014614832.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614832.1;locus_tag=CYJ03_RS10820;product=PTS system trehalose-specific EIIBC component;protein_id=WP_014614832.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	21426	23057	.	+	.	ID=gene-CYJ03_RS10825;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CYJ03_RS10825;old_locus_tag=CYJ03_010815
NZ_PJUP02000035.1	Protein Homology	CDS	21426	23057	.	+	0	ID=cds-WP_096533655.1;Parent=gene-CYJ03_RS10825;Dbxref=GenBank:WP_096533655.1;Name=WP_096533655.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220085.1;locus_tag=CYJ03_RS10825;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_096533655.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	23079	23813	.	+	.	ID=gene-CYJ03_RS10830;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CYJ03_RS10830;old_locus_tag=CYJ03_010820
NZ_PJUP02000035.1	Protein Homology	CDS	23079	23813	.	+	0	ID=cds-WP_063284944.1;Parent=gene-CYJ03_RS10830;Dbxref=GenBank:WP_063284944.1;Name=WP_063284944.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166102.1;locus_tag=CYJ03_RS10830;product=trehalose operon repressor;protein_id=WP_063284944.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	23899	24168	.	+	.	ID=gene-CYJ03_RS10835;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CYJ03_RS10835;old_locus_tag=CYJ03_010825
NZ_PJUP02000035.1	cmsearch	SRP_RNA	23899	24168	.	+	.	ID=rna-CYJ03_RS10835;Parent=gene-CYJ03_RS10835;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10835;product=signal recognition particle sRNA large type
NZ_PJUP02000035.1	cmsearch	exon	23899	24168	.	+	.	ID=exon-CYJ03_RS10835-1;Parent=rna-CYJ03_RS10835;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS10835;product=signal recognition particle sRNA large type
NZ_PJUP02000035.1	RefSeq	gene	24270	24803	.	+	.	ID=gene-CYJ03_RS10840;Name=CYJ03_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10840;old_locus_tag=CYJ03_010830
NZ_PJUP02000035.1	Protein Homology	CDS	24270	24803	.	+	0	ID=cds-WP_014614829.1;Parent=gene-CYJ03_RS10840;Dbxref=GenBank:WP_014614829.1;Name=WP_014614829.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=CYJ03_RS10840;product=GNAT family N-acetyltransferase;protein_id=WP_014614829.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	24870	26573	.	+	.	ID=gene-CYJ03_RS10845;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CYJ03_RS10845;old_locus_tag=CYJ03_010835
NZ_PJUP02000035.1	Protein Homology	CDS	24870	26573	.	+	0	ID=cds-WP_014614828.1;Parent=gene-CYJ03_RS10845;Dbxref=GenBank:WP_014614828.1;Name=WP_014614828.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=CYJ03_RS10845;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014614828.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	26665	26985	.	+	.	ID=gene-CYJ03_RS10850;Name=CYJ03_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10850;old_locus_tag=CYJ03_010840
NZ_PJUP02000035.1	Protein Homology	CDS	26665	26985	.	+	0	ID=cds-WP_014614827.1;Parent=gene-CYJ03_RS10850;Dbxref=GenBank:WP_014614827.1;Name=WP_014614827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=CYJ03_RS10850;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_014614827.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	26987	27583	.	+	.	ID=gene-CYJ03_RS10855;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CYJ03_RS10855;old_locus_tag=CYJ03_010845
NZ_PJUP02000035.1	Protein Homology	CDS	26987	27583	.	+	0	ID=cds-WP_014614826.1;Parent=gene-CYJ03_RS10855;Dbxref=GenBank:WP_014614826.1;Name=WP_014614826.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CYJ03_RS10855;product=recombination mediator RecR;protein_id=WP_014614826.1;transl_table=11
NZ_PJUP02000035.1	RefSeq	gene	28135	28594	.	+	.	ID=gene-CYJ03_RS12465;Name=CYJ03_RS12465;end_range=28594,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12465;partial=true
NZ_PJUP02000035.1	cmsearch	rRNA	28135	28594	.	+	.	ID=rna-CYJ03_RS12465;Parent=gene-CYJ03_RS12465;Dbxref=RFAM:RF00177;end_range=28594,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12465;partial=true;product=16S ribosomal RNA
NZ_PJUP02000035.1	cmsearch	exon	28135	28594	.	+	.	ID=exon-CYJ03_RS12465-1;Parent=rna-CYJ03_RS12465;Dbxref=RFAM:RF00177;end_range=28594,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12465;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PJUP02000041.1 1 20482
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000041.1	RefSeq	region	1	20482	.	+	.	ID=NZ_PJUP02000041.1:1..20482;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000041.1	RefSeq	gene	489	1217	.	+	.	ID=gene-CYJ03_RS11425;Name=CYJ03_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11425;old_locus_tag=CYJ03_011415
NZ_PJUP02000041.1	Protein Homology	CDS	489	1217	.	+	0	ID=cds-WP_014613368.1;Parent=gene-CYJ03_RS11425;Dbxref=GenBank:WP_014613368.1;Name=WP_014613368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613368.1;locus_tag=CYJ03_RS11425;product=hypothetical protein;protein_id=WP_014613368.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	1267	2475	.	-	.	ID=gene-CYJ03_RS11430;Name=CYJ03_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11430;old_locus_tag=CYJ03_011420
NZ_PJUP02000041.1	Protein Homology	CDS	1267	2475	.	-	0	ID=cds-WP_014613369.1;Parent=gene-CYJ03_RS11430;Dbxref=GenBank:WP_014613369.1;Name=WP_014613369.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165823.1;locus_tag=CYJ03_RS11430;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_014613369.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	2629	3699	.	+	.	ID=gene-CYJ03_RS11435;Name=CYJ03_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11435;old_locus_tag=CYJ03_011425
NZ_PJUP02000041.1	Protein Homology	CDS	2629	3699	.	+	0	ID=cds-WP_014613370.1;Parent=gene-CYJ03_RS11435;Dbxref=GenBank:WP_014613370.1;Name=WP_014613370.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=CYJ03_RS11435;product=D-alanine--D-alanine ligase;protein_id=WP_014613370.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	3711	5075	.	+	.	ID=gene-CYJ03_RS11440;Name=CYJ03_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11440;old_locus_tag=CYJ03_011430
NZ_PJUP02000041.1	Protein Homology	CDS	3711	5075	.	+	0	ID=cds-WP_014613371.1;Parent=gene-CYJ03_RS11440;Dbxref=GenBank:WP_014613371.1;Name=WP_014613371.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729431.1;locus_tag=CYJ03_RS11440;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_014613371.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	5356	6843	.	+	.	ID=gene-CYJ03_RS11445;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11445;old_locus_tag=CYJ03_011435
NZ_PJUP02000041.1	Protein Homology	CDS	5356	6843	.	+	0	ID=cds-WP_014613372.1;Parent=gene-CYJ03_RS11445;Dbxref=GenBank:WP_014613372.1;Name=WP_014613372.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=CYJ03_RS11445;product=degradosome RNA helicase CshA;protein_id=WP_014613372.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	7082	7555	.	+	.	ID=gene-CYJ03_RS11450;Name=CYJ03_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11450;old_locus_tag=CYJ03_011440
NZ_PJUP02000041.1	Protein Homology	CDS	7082	7555	.	+	0	ID=cds-WP_014613373.1;Parent=gene-CYJ03_RS11450;Dbxref=GenBank:WP_014613373.1;Name=WP_014613373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165827.1;locus_tag=CYJ03_RS11450;product=PH domain-containing protein;protein_id=WP_014613373.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	7548	9077	.	+	.	ID=gene-CYJ03_RS11455;Name=CYJ03_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11455;old_locus_tag=CYJ03_011445
NZ_PJUP02000041.1	Protein Homology	CDS	7548	9077	.	+	0	ID=cds-WP_101457498.1;Parent=gene-CYJ03_RS11455;Dbxref=GenBank:WP_101457498.1;Name=WP_101457498.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613374.1;locus_tag=CYJ03_RS11455;product=PH domain-containing protein;protein_id=WP_101457498.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	9061	9579	.	+	.	ID=gene-CYJ03_RS11460;Name=CYJ03_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11460;old_locus_tag=CYJ03_011450
NZ_PJUP02000041.1	Protein Homology	CDS	9061	9579	.	+	0	ID=cds-WP_014613375.1;Parent=gene-CYJ03_RS11460;Dbxref=GenBank:WP_014613375.1;Name=WP_014613375.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165829.1;locus_tag=CYJ03_RS11460;product=PH domain-containing protein;protein_id=WP_014613375.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	9576	9926	.	+	.	ID=gene-CYJ03_RS11465;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CYJ03_RS11465;old_locus_tag=CYJ03_011455
NZ_PJUP02000041.1	Protein Homology	CDS	9576	9926	.	+	0	ID=cds-WP_014613376.1;Parent=gene-CYJ03_RS11465;Dbxref=GenBank:WP_014613376.1;Name=WP_014613376.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165830.1;locus_tag=CYJ03_RS11465;product=holo-ACP synthase;protein_id=WP_014613376.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	9960	11108	.	+	.	ID=gene-CYJ03_RS11470;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ03_RS11470;old_locus_tag=CYJ03_011460
NZ_PJUP02000041.1	Protein Homology	CDS	9960	11108	.	+	0	ID=cds-WP_065354670.1;Parent=gene-CYJ03_RS11470;Dbxref=GenBank:WP_065354670.1;Name=WP_065354670.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=CYJ03_RS11470;product=alanine racemase;protein_id=WP_065354670.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	11193	11363	.	+	.	ID=gene-CYJ03_RS11475;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=CYJ03_RS11475;old_locus_tag=CYJ03_011465
NZ_PJUP02000041.1	Protein Homology	CDS	11193	11363	.	+	0	ID=cds-WP_014613378.1;Parent=gene-CYJ03_RS11475;Dbxref=GenBank:WP_014613378.1;Name=WP_014613378.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=CYJ03_RS11475;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_014613378.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	11364	11717	.	+	.	ID=gene-CYJ03_RS11480;Name=CYJ03_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11480;old_locus_tag=CYJ03_011470
NZ_PJUP02000041.1	Protein Homology	CDS	11364	11717	.	+	0	ID=cds-WP_014613379.1;Parent=gene-CYJ03_RS11480;Dbxref=GenBank:WP_014613379.1;Name=WP_014613379.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=CYJ03_RS11480;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014613379.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	11775	12779	.	+	.	ID=gene-CYJ03_RS11485;Name=CYJ03_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11485;old_locus_tag=CYJ03_011475
NZ_PJUP02000041.1	Protein Homology	CDS	11775	12779	.	+	0	ID=cds-WP_014613380.1;Parent=gene-CYJ03_RS11485;Dbxref=GenBank:WP_014613380.1;Name=WP_014613380.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613380.1;locus_tag=CYJ03_RS11485;product=SpoIIE family protein phosphatase;protein_id=WP_014613380.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	12858	13184	.	+	.	ID=gene-CYJ03_RS11490;Name=CYJ03_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11490;old_locus_tag=CYJ03_011480
NZ_PJUP02000041.1	Protein Homology	CDS	12858	13184	.	+	0	ID=cds-WP_014613381.1;Parent=gene-CYJ03_RS11490;Dbxref=GenBank:WP_014613381.1;Name=WP_014613381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CYJ03_RS11490;product=anti-sigma factor antagonist;protein_id=WP_014613381.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	13184	13663	.	+	.	ID=gene-CYJ03_RS11495;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=CYJ03_RS11495;old_locus_tag=CYJ03_011485
NZ_PJUP02000041.1	Protein Homology	CDS	13184	13663	.	+	0	ID=cds-WP_031253870.1;Parent=gene-CYJ03_RS11495;Dbxref=GenBank:WP_031253870.1;Name=WP_031253870.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169269.1;locus_tag=CYJ03_RS11495;product=anti-sigma B factor RsbW;protein_id=WP_031253870.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	13638	14408	.	+	.	ID=gene-CYJ03_RS11500;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CYJ03_RS11500;old_locus_tag=CYJ03_011490
NZ_PJUP02000041.1	Protein Homology	CDS	13638	14408	.	+	0	ID=cds-WP_015729428.1;Parent=gene-CYJ03_RS11500;Dbxref=GenBank:WP_015729428.1;Name=WP_015729428.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CYJ03_RS11500;product=RNA polymerase sigma factor SigB;protein_id=WP_015729428.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	14687	16837	.	+	.	ID=gene-CYJ03_RS11505;Name=CYJ03_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11505;old_locus_tag=CYJ03_011495
NZ_PJUP02000041.1	Protein Homology	CDS	14687	16837	.	+	0	ID=cds-WP_101457497.1;Parent=gene-CYJ03_RS11505;Dbxref=GenBank:WP_101457497.1;Name=WP_101457497.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505949.1;locus_tag=CYJ03_RS11505;product=Tex family protein;protein_id=WP_101457497.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	16830	17282	.	+	.	ID=gene-CYJ03_RS11510;Name=CYJ03_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11510;old_locus_tag=CYJ03_011500
NZ_PJUP02000041.1	Protein Homology	CDS	16830	17282	.	+	0	ID=cds-WP_015729426.1;Parent=gene-CYJ03_RS11510;Dbxref=GenBank:WP_015729426.1;Name=WP_015729426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219959.1;locus_tag=CYJ03_RS11510;product=SprT family protein;protein_id=WP_015729426.1;transl_table=11
NZ_PJUP02000041.1	RefSeq	gene	17637	17719	.	+	.	ID=gene-CYJ03_RS11515;Name=CYJ03_RS11515;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11515;old_locus_tag=CYJ03_011505
NZ_PJUP02000041.1	tRNAscan-SE	tRNA	17637	17719	.	+	.	ID=rna-CYJ03_RS11515;Parent=gene-CYJ03_RS11515;anticodon=(pos:17670..17672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11515;product=tRNA-Leu
NZ_PJUP02000041.1	tRNAscan-SE	exon	17637	17719	.	+	.	ID=exon-CYJ03_RS11515-1;Parent=rna-CYJ03_RS11515;anticodon=(pos:17670..17672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11515;product=tRNA-Leu
NZ_PJUP02000041.1	RefSeq	gene	17744	17817	.	+	.	ID=gene-CYJ03_RS11520;Name=CYJ03_RS11520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11520;old_locus_tag=CYJ03_011510
NZ_PJUP02000041.1	tRNAscan-SE	tRNA	17744	17817	.	+	.	ID=rna-CYJ03_RS11520;Parent=gene-CYJ03_RS11520;anticodon=(pos:17776..17778);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11520;product=tRNA-Gly
NZ_PJUP02000041.1	tRNAscan-SE	exon	17744	17817	.	+	.	ID=exon-CYJ03_RS11520-1;Parent=rna-CYJ03_RS11520;anticodon=(pos:17776..17778);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11520;product=tRNA-Gly
NZ_PJUP02000041.1	RefSeq	gene	17952	19503	.	+	.	ID=gene-CYJ03_RS11525;Name=CYJ03_RS11525;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS11525;old_locus_tag=CYJ03_011515
NZ_PJUP02000041.1	cmsearch	rRNA	17952	19503	.	+	.	ID=rna-CYJ03_RS11525;Parent=gene-CYJ03_RS11525;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS11525;product=16S ribosomal RNA
NZ_PJUP02000041.1	cmsearch	exon	17952	19503	.	+	.	ID=exon-CYJ03_RS11525-1;Parent=rna-CYJ03_RS11525;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS11525;product=16S ribosomal RNA
NZ_PJUP02000041.1	RefSeq	gene	19896	20482	.	+	.	ID=gene-CYJ03_RS12470;Name=CYJ03_RS12470;end_range=20482,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CYJ03_RS12470;partial=true
NZ_PJUP02000041.1	cmsearch	rRNA	19896	20482	.	+	.	ID=rna-CYJ03_RS12470;Parent=gene-CYJ03_RS12470;Dbxref=RFAM:RF02541;end_range=20482,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12470;partial=true;product=23S ribosomal RNA
NZ_PJUP02000041.1	cmsearch	exon	19896	20482	.	+	.	ID=exon-CYJ03_RS12470-1;Parent=rna-CYJ03_RS12470;Dbxref=RFAM:RF02541;end_range=20482,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS12470;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PJUP02000030.1 1 32597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000030.1	RefSeq	region	1	32597	.	+	.	ID=NZ_PJUP02000030.1:1..32597;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000030.1	RefSeq	pseudogene	1	152	.	+	.	ID=gene-CYJ03_RS12745;Name=CYJ03_RS12745;end_range=152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12745;old_locus_tag=CYJ03_009910;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000030.1	Protein Homology	CDS	1	152	.	+	2	ID=cds-CYJ03_RS12745;Parent=gene-CYJ03_RS12745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=CYJ03_RS12745;partial=true;product=acylglycerol kinase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000030.1	RefSeq	pseudogene	139	354	.	-	.	ID=gene-CYJ03_RS09925;Name=CYJ03_RS09925;end_range=354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS09925;old_locus_tag=CYJ03_009915;partial=true;pseudo=true;start_range=.,139
NZ_PJUP02000030.1	Protein Homology	CDS	139	354	.	-	0	ID=cds-CYJ03_RS09925;Parent=gene-CYJ03_RS09925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006099,GO:0008924;end_range=354,.;gbkey=CDS;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501109.1;locus_tag=CYJ03_RS09925;partial=true;product=malate:quinone oxidoreductase;pseudo=true;start_range=.,139;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	1029	2261	.	-	.	ID=gene-CYJ03_RS09930;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CYJ03_RS09930;old_locus_tag=CYJ03_009920
NZ_PJUP02000030.1	Protein Homology	CDS	1029	2261	.	-	0	ID=cds-WP_014614229.1;Parent=gene-CYJ03_RS09930;Dbxref=GenBank:WP_014614229.1;Name=WP_014614229.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168168.1;locus_tag=CYJ03_RS09930;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_014614229.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	2332	2607	.	-	.	ID=gene-CYJ03_RS09935;Name=CYJ03_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09935;old_locus_tag=CYJ03_009925
NZ_PJUP02000030.1	Protein Homology	CDS	2332	2607	.	-	0	ID=cds-WP_014614230.1;Parent=gene-CYJ03_RS09935;Dbxref=GenBank:WP_014614230.1;Name=WP_014614230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499608.1;locus_tag=CYJ03_RS09935;product=Fpa/YlaN family protein;protein_id=WP_014614230.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	2744	3226	.	+	.	ID=gene-CYJ03_RS09940;Name=CYJ03_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09940;old_locus_tag=CYJ03_009930
NZ_PJUP02000030.1	Protein Homology	CDS	2744	3226	.	+	0	ID=cds-WP_014614231.1;Parent=gene-CYJ03_RS09940;Dbxref=GenBank:WP_014614231.1;Name=WP_014614231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168169.1;locus_tag=CYJ03_RS09940;product=hypothetical protein;protein_id=WP_014614231.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	3227	3430	.	+	.	ID=gene-CYJ03_RS09945;Name=CYJ03_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09945;old_locus_tag=CYJ03_009935
NZ_PJUP02000030.1	Protein Homology	CDS	3227	3430	.	+	0	ID=cds-WP_014614232.1;Parent=gene-CYJ03_RS09945;Dbxref=GenBank:WP_014614232.1;Name=WP_014614232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450673.1;locus_tag=CYJ03_RS09945;product=DUF2197 domain-containing protein;protein_id=WP_014614232.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	3554	4681	.	-	.	ID=gene-CYJ03_RS09950;Name=CYJ03_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09950;old_locus_tag=CYJ03_009940
NZ_PJUP02000030.1	Protein Homology	CDS	3554	4681	.	-	0	ID=cds-WP_063278778.1;Parent=gene-CYJ03_RS09950;Dbxref=GenBank:WP_063278778.1;Name=WP_063278778.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614233.1;locus_tag=CYJ03_RS09950;product=NADH-dependent flavin oxidoreductase;protein_id=WP_063278778.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	5109	6959	.	-	.	ID=gene-CYJ03_RS09955;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CYJ03_RS09955;old_locus_tag=CYJ03_009945
NZ_PJUP02000030.1	Protein Homology	CDS	5109	6959	.	-	0	ID=cds-WP_014614234.1;Parent=gene-CYJ03_RS09955;Dbxref=GenBank:WP_014614234.1;Name=WP_014614234.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614234.1;locus_tag=CYJ03_RS09955;product=translational GTPase TypA;protein_id=WP_014614234.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	7050	7241	.	+	.	ID=gene-CYJ03_RS09960;Name=CYJ03_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09960;old_locus_tag=CYJ03_009950
NZ_PJUP02000030.1	Protein Homology	CDS	7050	7241	.	+	0	ID=cds-WP_225549974.1;Parent=gene-CYJ03_RS09960;Dbxref=GenBank:WP_225549974.1;Name=WP_225549974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446184.1;locus_tag=CYJ03_RS09960;product=DUF5325 family protein;protein_id=WP_225549974.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	7469	8287	.	-	.	ID=gene-CYJ03_RS09965;Name=CYJ03_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09965;old_locus_tag=CYJ03_009955
NZ_PJUP02000030.1	Protein Homology	CDS	7469	8287	.	-	0	ID=cds-WP_014614236.1;Parent=gene-CYJ03_RS09965;Dbxref=GenBank:WP_014614236.1;Name=WP_014614236.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614236.1;locus_tag=CYJ03_RS09965;product=inositol monophosphatase family protein;protein_id=WP_014614236.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	8405	9016	.	+	.	ID=gene-CYJ03_RS09970;Name=CYJ03_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09970;old_locus_tag=CYJ03_009960
NZ_PJUP02000030.1	Protein Homology	CDS	8405	9016	.	+	0	ID=cds-WP_014614237.1;Parent=gene-CYJ03_RS09970;Dbxref=GenBank:WP_014614237.1;Name=WP_014614237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=CYJ03_RS09970;product=YktB family protein;protein_id=WP_014614237.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	9702	10391	.	-	.	ID=gene-CYJ03_RS09975;Name=CYJ03_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09975;old_locus_tag=CYJ03_009965
NZ_PJUP02000030.1	Protein Homology	CDS	9702	10391	.	-	0	ID=cds-WP_020220275.1;Parent=gene-CYJ03_RS09975;Dbxref=GenBank:WP_020220275.1;Name=WP_020220275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220275.1;locus_tag=CYJ03_RS09975;product=DUF4064 domain-containing protein;protein_id=WP_020220275.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	10619	11641	.	-	.	ID=gene-CYJ03_RS09980;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=CYJ03_RS09980;old_locus_tag=CYJ03_009970
NZ_PJUP02000030.1	Protein Homology	CDS	10619	11641	.	-	0	ID=cds-WP_020220276.1;Parent=gene-CYJ03_RS09980;Dbxref=GenBank:WP_020220276.1;Name=WP_020220276.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220276.1;locus_tag=CYJ03_RS09980;product=lipoteichoic acid stability factor AuxB;protein_id=WP_020220276.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	11713	12786	.	-	.	ID=gene-CYJ03_RS09985;Name=CYJ03_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09985;old_locus_tag=CYJ03_009975
NZ_PJUP02000030.1	Protein Homology	CDS	11713	12786	.	-	0	ID=cds-WP_015728959.1;Parent=gene-CYJ03_RS09985;Dbxref=GenBank:WP_015728959.1;Name=WP_015728959.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=CYJ03_RS09985;product=ABC transporter substrate-binding protein;protein_id=WP_015728959.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	12783	13595	.	-	.	ID=gene-CYJ03_RS09990;Name=CYJ03_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09990;old_locus_tag=CYJ03_009980
NZ_PJUP02000030.1	Protein Homology	CDS	12783	13595	.	-	0	ID=cds-WP_096548548.1;Parent=gene-CYJ03_RS09990;Dbxref=GenBank:WP_096548548.1;Name=WP_096548548.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=CYJ03_RS09990;product=ABC transporter permease;protein_id=WP_096548548.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	13592	14398	.	-	.	ID=gene-CYJ03_RS09995;Name=CYJ03_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS09995;old_locus_tag=CYJ03_009985
NZ_PJUP02000030.1	Protein Homology	CDS	13592	14398	.	-	0	ID=cds-WP_019165571.1;Parent=gene-CYJ03_RS09995;Dbxref=GenBank:WP_019165571.1;Name=WP_019165571.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=CYJ03_RS09995;product=ABC transporter permease;protein_id=WP_019165571.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	14385	15485	.	-	.	ID=gene-CYJ03_RS10000;Name=CYJ03_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10000;old_locus_tag=CYJ03_009990
NZ_PJUP02000030.1	Protein Homology	CDS	14385	15485	.	-	0	ID=cds-WP_014614243.1;Parent=gene-CYJ03_RS10000;Dbxref=GenBank:WP_014614243.1;Name=WP_014614243.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=CYJ03_RS10000;product=ABC transporter ATP-binding protein;protein_id=WP_014614243.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	15500	16039	.	-	.	ID=gene-CYJ03_RS10005;Name=CYJ03_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10005;old_locus_tag=CYJ03_009995
NZ_PJUP02000030.1	Protein Homology	CDS	15500	16039	.	-	0	ID=cds-WP_019165573.1;Parent=gene-CYJ03_RS10005;Dbxref=GenBank:WP_019165573.1;Name=WP_019165573.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=CYJ03_RS10005;product=helix-turn-helix domain-containing protein;protein_id=WP_019165573.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	16143	16415	.	-	.	ID=gene-CYJ03_RS10010;Name=CYJ03_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10010;old_locus_tag=CYJ03_010000
NZ_PJUP02000030.1	Protein Homology	CDS	16143	16415	.	-	0	ID=cds-WP_014614245.1;Parent=gene-CYJ03_RS10010;Dbxref=GenBank:WP_014614245.1;Name=WP_014614245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=CYJ03_RS10010;product=UPF0223 family protein;protein_id=WP_014614245.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	17228	18634	.	-	.	ID=gene-CYJ03_RS10015;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10015;old_locus_tag=CYJ03_010005
NZ_PJUP02000030.1	Protein Homology	CDS	17228	18634	.	-	0	ID=cds-WP_014614246.1;Parent=gene-CYJ03_RS10015;Dbxref=GenBank:WP_014614246.1;Name=WP_014614246.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CYJ03_RS10015;product=dihydrolipoyl dehydrogenase;protein_id=WP_014614246.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	18638	19939	.	-	.	ID=gene-CYJ03_RS10020;Name=CYJ03_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10020;old_locus_tag=CYJ03_010010
NZ_PJUP02000030.1	Protein Homology	CDS	18638	19939	.	-	0	ID=cds-WP_014614247.1;Parent=gene-CYJ03_RS10020;Dbxref=GenBank:WP_014614247.1;Name=WP_014614247.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CYJ03_RS10020;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_014614247.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	20095	21072	.	-	.	ID=gene-CYJ03_RS10025;Name=CYJ03_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10025;old_locus_tag=CYJ03_010015
NZ_PJUP02000030.1	Protein Homology	CDS	20095	21072	.	-	0	ID=cds-WP_014614248.1;Parent=gene-CYJ03_RS10025;Dbxref=GenBank:WP_014614248.1;Name=WP_014614248.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CYJ03_RS10025;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014614248.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	21076	22188	.	-	.	ID=gene-CYJ03_RS10030;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10030;old_locus_tag=CYJ03_010020
NZ_PJUP02000030.1	Protein Homology	CDS	21076	22188	.	-	0	ID=cds-WP_014614249.1;Parent=gene-CYJ03_RS10030;Dbxref=GenBank:WP_014614249.1;Name=WP_014614249.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CYJ03_RS10030;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_014614249.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	22352	22984	.	-	.	ID=gene-CYJ03_RS10035;Name=CYJ03_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10035;old_locus_tag=CYJ03_010025
NZ_PJUP02000030.1	Protein Homology	CDS	22352	22984	.	-	0	ID=cds-WP_015728956.1;Parent=gene-CYJ03_RS10035;Dbxref=GenBank:WP_015728956.1;Name=WP_015728956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=CYJ03_RS10035;product=YkyA family protein;protein_id=WP_015728956.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	23229	23780	.	+	.	ID=gene-CYJ03_RS10040;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CYJ03_RS10040;old_locus_tag=CYJ03_010030
NZ_PJUP02000030.1	Protein Homology	CDS	23229	23780	.	+	0	ID=cds-WP_014614251.1;Parent=gene-CYJ03_RS10040;Dbxref=GenBank:WP_014614251.1;Name=WP_014614251.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=CYJ03_RS10040;product=peptide deformylase;protein_id=WP_014614251.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	24394	24666	.	-	.	ID=gene-CYJ03_RS10045;Name=CYJ03_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10045;old_locus_tag=CYJ03_010035
NZ_PJUP02000030.1	Protein Homology	CDS	24394	24666	.	-	0	ID=cds-WP_096548552.1;Parent=gene-CYJ03_RS10045;Dbxref=GenBank:WP_096548552.1;Name=WP_096548552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=CYJ03_RS10045;product=hypothetical protein;protein_id=WP_096548552.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	25005	25220	.	+	.	ID=gene-CYJ03_RS10050;Name=CYJ03_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10050;old_locus_tag=CYJ03_010040
NZ_PJUP02000030.1	Protein Homology	CDS	25005	25220	.	+	0	ID=cds-WP_014614254.1;Parent=gene-CYJ03_RS10050;Dbxref=GenBank:WP_014614254.1;Name=WP_014614254.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CYJ03_RS10050;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_014614254.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	25220	26899	.	+	.	ID=gene-CYJ03_RS10055;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10055;old_locus_tag=CYJ03_010045
NZ_PJUP02000030.1	Protein Homology	CDS	25220	26899	.	+	0	ID=cds-WP_014614255.1;Parent=gene-CYJ03_RS10055;Dbxref=GenBank:WP_014614255.1;Name=WP_014614255.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493055.1;locus_tag=CYJ03_RS10055;product=ribonuclease J1;protein_id=WP_014614255.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	27353	27496	.	-	.	ID=gene-CYJ03_RS12335;Name=CYJ03_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12335
NZ_PJUP02000030.1	GeneMarkS-2+	CDS	27353	27496	.	-	0	ID=cds-WP_157929437.1;Parent=gene-CYJ03_RS12335;Dbxref=GenBank:WP_157929437.1;Name=WP_157929437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12335;product=hypothetical protein;protein_id=WP_157929437.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	27546	28493	.	-	.	ID=gene-CYJ03_RS10060;Name=CYJ03_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10060;old_locus_tag=CYJ03_010050
NZ_PJUP02000030.1	Protein Homology	CDS	27546	28493	.	-	0	ID=cds-WP_037543317.1;Parent=gene-CYJ03_RS10060;Dbxref=GenBank:WP_037543317.1;Name=WP_037543317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025114.7;locus_tag=CYJ03_RS10060;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037543317.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	28490	29728	.	-	.	ID=gene-CYJ03_RS10065;Name=CYJ03_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10065;old_locus_tag=CYJ03_010055
NZ_PJUP02000030.1	Protein Homology	CDS	28490	29728	.	-	0	ID=cds-WP_037543320.1;Parent=gene-CYJ03_RS10065;Dbxref=GenBank:WP_037543320.1;Name=WP_037543320.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ03_RS10065;product=MFS transporter;protein_id=WP_037543320.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	29725	31065	.	-	.	ID=gene-CYJ03_RS10070;Name=CYJ03_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10070;old_locus_tag=CYJ03_010060
NZ_PJUP02000030.1	GeneMarkS-2+	CDS	29725	31065	.	-	0	ID=cds-WP_129923939.1;Parent=gene-CYJ03_RS10070;Dbxref=GenBank:WP_129923939.1;Name=WP_129923939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS10070;product=alkaline phosphatase family protein;protein_id=WP_129923939.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	gene	31049	32140	.	-	.	ID=gene-CYJ03_RS10075;Name=CYJ03_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10075;old_locus_tag=CYJ03_010065
NZ_PJUP02000030.1	Protein Homology	CDS	31049	32140	.	-	0	ID=cds-WP_101431692.1;Parent=gene-CYJ03_RS10075;Dbxref=GenBank:WP_101431692.1;Name=WP_101431692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.7;locus_tag=CYJ03_RS10075;product=type III PLP-dependent enzyme domain-containing protein;protein_id=WP_101431692.1;transl_table=11
NZ_PJUP02000030.1	RefSeq	pseudogene	32298	32522	.	-	.	ID=gene-CYJ03_RS10080;Name=CYJ03_RS10080;end_range=32522,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10080;old_locus_tag=CYJ03_010070;partial=true;pseudo=true
NZ_PJUP02000030.1	Protein Homology	CDS	32298	32522	.	-	0	ID=cds-CYJ03_RS10080;Parent=gene-CYJ03_RS10080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS10080;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000037.1 1 25121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000037.1	RefSeq	region	1	25121	.	+	.	ID=NZ_PJUP02000037.1:1..25121;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000037.1	RefSeq	pseudogene	730	2037	.	-	.	ID=gene-CYJ03_RS10975;Name=lip;end_range=2037,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=CYJ03_RS10975;old_locus_tag=CYJ03_010965;partial=true;pseudo=true
NZ_PJUP02000037.1	Protein Homology	CDS	730	2037	.	-	0	ID=cds-CYJ03_RS10975;Parent=gene-CYJ03_RS10975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=2037,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497700.1;locus_tag=CYJ03_RS10975;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11
NZ_PJUP02000037.1	RefSeq	pseudogene	2110	2196	.	-	.	ID=gene-CYJ03_RS12945;Name=CYJ03_RS12945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12945;partial=true;pseudo=true;start_range=.,2110
NZ_PJUP02000037.1	Protein Homology	CDS	2110	2196	.	-	0	ID=cds-CYJ03_RS12945;Parent=gene-CYJ03_RS12945;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=CYJ03_RS12945;partial=true;product=YSIRK-type signal peptide-containing protein;pseudo=true;start_range=.,2110;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	2711	3655	.	+	.	ID=gene-CYJ03_RS10980;Name=CYJ03_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10980;old_locus_tag=CYJ03_010970
NZ_PJUP02000037.1	Protein Homology	CDS	2711	3655	.	+	0	ID=cds-WP_104052360.1;Parent=gene-CYJ03_RS10980;Dbxref=GenBank:WP_104052360.1;Name=WP_104052360.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=CYJ03_RS10980;product=cation diffusion facilitator family transporter;protein_id=WP_104052360.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	3825	4724	.	-	.	ID=gene-CYJ03_RS10985;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CYJ03_RS10985;old_locus_tag=CYJ03_010975
NZ_PJUP02000037.1	Protein Homology	CDS	3825	4724	.	-	0	ID=cds-WP_104052361.1;Parent=gene-CYJ03_RS10985;Dbxref=GenBank:WP_104052361.1;Name=WP_104052361.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612951.1;locus_tag=CYJ03_RS10985;product=urea transporter;protein_id=WP_104052361.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	4972	5274	.	+	.	ID=gene-CYJ03_RS10990;Name=CYJ03_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10990;old_locus_tag=CYJ03_010980
NZ_PJUP02000037.1	Protein Homology	CDS	4972	5274	.	+	0	ID=cds-WP_014612952.1;Parent=gene-CYJ03_RS10990;Dbxref=GenBank:WP_014612952.1;Name=WP_014612952.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=CYJ03_RS10990;product=urease subunit gamma;protein_id=WP_014612952.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	5287	5643	.	+	.	ID=gene-CYJ03_RS10995;Name=CYJ03_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10995;old_locus_tag=CYJ03_010985
NZ_PJUP02000037.1	Protein Homology	CDS	5287	5643	.	+	0	ID=cds-WP_041614887.1;Parent=gene-CYJ03_RS10995;Dbxref=GenBank:WP_041614887.1;Name=WP_041614887.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=CYJ03_RS10995;product=urease subunit beta;protein_id=WP_041614887.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	5640	7355	.	+	.	ID=gene-CYJ03_RS11000;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11000;old_locus_tag=CYJ03_010990
NZ_PJUP02000037.1	Protein Homology	CDS	5640	7355	.	+	0	ID=cds-WP_041614886.1;Parent=gene-CYJ03_RS11000;Dbxref=GenBank:WP_041614886.1;Name=WP_041614886.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CYJ03_RS11000;product=urease subunit alpha;protein_id=WP_041614886.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	7695	8240	.	+	.	ID=gene-CYJ03_RS11005;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CYJ03_RS11005;old_locus_tag=CYJ03_010995
NZ_PJUP02000037.1	Protein Homology	CDS	7695	8240	.	+	0	ID=cds-WP_014612955.1;Parent=gene-CYJ03_RS11005;Dbxref=GenBank:WP_014612955.1;Name=WP_014612955.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=CYJ03_RS11005;product=dCTP deaminase;protein_id=WP_014612955.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	8241	9143	.	+	.	ID=gene-CYJ03_RS11010;Name=CYJ03_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11010;old_locus_tag=CYJ03_011000
NZ_PJUP02000037.1	Protein Homology	CDS	8241	9143	.	+	0	ID=cds-WP_014612956.1;Parent=gene-CYJ03_RS11010;Dbxref=GenBank:WP_014612956.1;Name=WP_014612956.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=CYJ03_RS11010;product=CobW family GTP-binding protein;protein_id=WP_014612956.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	9443	9865	.	+	.	ID=gene-CYJ03_RS11015;Name=CYJ03_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11015;old_locus_tag=CYJ03_011005
NZ_PJUP02000037.1	Protein Homology	CDS	9443	9865	.	+	0	ID=cds-WP_014612957.1;Parent=gene-CYJ03_RS11015;Dbxref=GenBank:WP_014612957.1;Name=WP_014612957.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=CYJ03_RS11015;product=universal stress protein;protein_id=WP_014612957.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	10068	10328	.	+	.	ID=gene-CYJ03_RS11020;Name=CYJ03_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11020;old_locus_tag=CYJ03_011010
NZ_PJUP02000037.1	Protein Homology	CDS	10068	10328	.	+	0	ID=cds-WP_104052362.1;Parent=gene-CYJ03_RS11020;Dbxref=GenBank:WP_104052362.1;Name=WP_104052362.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219461.1;locus_tag=CYJ03_RS11020;product=ferredoxin;protein_id=WP_104052362.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	10328	12013	.	+	.	ID=gene-CYJ03_RS11025;Name=CYJ03_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11025;old_locus_tag=CYJ03_011015
NZ_PJUP02000037.1	Protein Homology	CDS	10328	12013	.	+	0	ID=cds-WP_104052363.1;Parent=gene-CYJ03_RS11025;Dbxref=GenBank:WP_104052363.1;Name=WP_104052363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729641.1;locus_tag=CYJ03_RS11025;product=hypothetical protein;protein_id=WP_104052363.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	12032	13279	.	+	.	ID=gene-CYJ03_RS11030;Name=CYJ03_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11030;old_locus_tag=CYJ03_011020
NZ_PJUP02000037.1	Protein Homology	CDS	12032	13279	.	+	0	ID=cds-WP_104052364.1;Parent=gene-CYJ03_RS11030;Dbxref=GenBank:WP_104052364.1;Name=WP_104052364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612960.1;locus_tag=CYJ03_RS11030;product=ATP-grasp domain-containing protein;protein_id=WP_104052364.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	13276	14508	.	+	.	ID=gene-CYJ03_RS11035;Name=CYJ03_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11035;old_locus_tag=CYJ03_011025
NZ_PJUP02000037.1	Protein Homology	CDS	13276	14508	.	+	0	ID=cds-WP_104052365.1;Parent=gene-CYJ03_RS11035;Dbxref=GenBank:WP_104052365.1;Name=WP_104052365.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612961.1;locus_tag=CYJ03_RS11035;product=ATP-grasp domain-containing protein;protein_id=WP_104052365.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	14863	16092	.	-	.	ID=gene-CYJ03_RS11045;Name=CYJ03_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11045;old_locus_tag=CYJ03_011035
NZ_PJUP02000037.1	Protein Homology	CDS	14863	16092	.	-	0	ID=cds-WP_104052366.1;Parent=gene-CYJ03_RS11045;Dbxref=GenBank:WP_104052366.1;Name=WP_104052366.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167237.1;locus_tag=CYJ03_RS11045;product=MFS transporter;protein_id=WP_104052366.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	16250	17179	.	+	.	ID=gene-CYJ03_RS11050;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CYJ03_RS11050;old_locus_tag=CYJ03_011040
NZ_PJUP02000037.1	Protein Homology	CDS	16250	17179	.	+	0	ID=cds-WP_104052367.1;Parent=gene-CYJ03_RS11050;Dbxref=GenBank:WP_104052367.1;Name=WP_104052367.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729636.1;locus_tag=CYJ03_RS11050;product=cidABC operon transcriptional activator CidR;protein_id=WP_104052367.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	17257	17649	.	+	.	ID=gene-CYJ03_RS11055;Name=CYJ03_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11055;old_locus_tag=CYJ03_011045
NZ_PJUP02000037.1	Protein Homology	CDS	17257	17649	.	+	0	ID=cds-WP_014612964.1;Parent=gene-CYJ03_RS11055;Dbxref=GenBank:WP_014612964.1;Name=WP_014612964.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164941.1;locus_tag=CYJ03_RS11055;product=CidA/LrgA family protein;protein_id=WP_014612964.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	17646	18332	.	+	.	ID=gene-CYJ03_RS11060;Name=CYJ03_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11060;old_locus_tag=CYJ03_011050
NZ_PJUP02000037.1	Protein Homology	CDS	17646	18332	.	+	0	ID=cds-WP_104052368.1;Parent=gene-CYJ03_RS11060;Dbxref=GenBank:WP_104052368.1;Name=WP_104052368.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612965.1;locus_tag=CYJ03_RS11060;product=LrgB family protein;protein_id=WP_104052368.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	18907	19083	.	+	.	ID=gene-CYJ03_RS12350;Name=CYJ03_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12350
NZ_PJUP02000037.1	Protein Homology	CDS	18907	19083	.	+	0	ID=cds-WP_014612966.1;Parent=gene-CYJ03_RS12350;Dbxref=GenBank:WP_014612966.1;Name=WP_014612966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=CYJ03_RS12350;product=hypothetical protein;protein_id=WP_014612966.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	19346	20170	.	+	.	ID=gene-CYJ03_RS11070;Name=CYJ03_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11070;old_locus_tag=CYJ03_011060
NZ_PJUP02000037.1	Protein Homology	CDS	19346	20170	.	+	0	ID=cds-WP_014612967.1;Parent=gene-CYJ03_RS11070;Dbxref=GenBank:WP_014612967.1;Name=WP_014612967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612967.1;locus_tag=CYJ03_RS11070;product=hypothetical protein;protein_id=WP_014612967.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	20390	20839	.	-	.	ID=gene-CYJ03_RS11075;Name=CYJ03_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11075;old_locus_tag=CYJ03_011065
NZ_PJUP02000037.1	Protein Homology	CDS	20390	20839	.	-	0	ID=cds-WP_101458467.1;Parent=gene-CYJ03_RS11075;Dbxref=GenBank:WP_101458467.1;Name=WP_101458467.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164946.1;locus_tag=CYJ03_RS11075;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_101458467.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	20981	21610	.	+	.	ID=gene-CYJ03_RS11080;Name=CYJ03_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11080;old_locus_tag=CYJ03_011070
NZ_PJUP02000037.1	Protein Homology	CDS	20981	21610	.	+	0	ID=cds-WP_015729635.1;Parent=gene-CYJ03_RS11080;Dbxref=GenBank:WP_015729635.1;Name=WP_015729635.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729635.1;locus_tag=CYJ03_RS11080;product=nitroreductase family protein;protein_id=WP_015729635.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	22445	23164	.	+	.	ID=gene-CYJ03_RS11085;Name=CYJ03_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11085;old_locus_tag=CYJ03_011075
NZ_PJUP02000037.1	Protein Homology	CDS	22445	23164	.	+	0	ID=cds-WP_101458229.1;Parent=gene-CYJ03_RS11085;Dbxref=GenBank:WP_101458229.1;Name=WP_101458229.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167245.1;locus_tag=CYJ03_RS11085;product=GTP pyrophosphokinase;protein_id=WP_101458229.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	gene	23475	24032	.	-	.	ID=gene-CYJ03_RS11090;Name=CYJ03_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11090;old_locus_tag=CYJ03_011080
NZ_PJUP02000037.1	Protein Homology	CDS	23475	24032	.	-	0	ID=cds-WP_101458228.1;Parent=gene-CYJ03_RS11090;Dbxref=GenBank:WP_101458228.1;Name=WP_101458228.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612971.1;locus_tag=CYJ03_RS11090;product=M23 family metallopeptidase;protein_id=WP_101458228.1;transl_table=11
NZ_PJUP02000037.1	RefSeq	pseudogene	24218	25121	.	-	.	ID=gene-CYJ03_RS11095;Name=CYJ03_RS11095;end_range=25121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11095;old_locus_tag=CYJ03_011085;partial=true;pseudo=true
NZ_PJUP02000037.1	Protein Homology	CDS	24218	25121	.	-	1	ID=cds-CYJ03_RS11095;Parent=gene-CYJ03_RS11095;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=25121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS11095;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000032.1 1 32434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000032.1	RefSeq	region	1	32434	.	+	.	ID=NZ_PJUP02000032.1:1..32434;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000032.1	RefSeq	pseudogene	9	149	.	+	.	ID=gene-CYJ03_RS12225;Name=CYJ03_RS12225;end_range=149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12225;partial=true;pseudo=true;start_range=.,9
NZ_PJUP02000032.1	Protein Homology	CDS	9	149	.	+	0	ID=cds-CYJ03_RS12225;Parent=gene-CYJ03_RS12225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006094,GO:0042132;end_range=149,.;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012118863.1;locus_tag=CYJ03_RS12225;partial=true;product=fructose-bisphosphatase class III;pseudo=true;start_range=.,9;transl_table=11
NZ_PJUP02000032.1	RefSeq	pseudogene	177	3326	.	-	.	ID=gene-CYJ03_RS10275;Name=CYJ03_RS10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10275;old_locus_tag=CYJ03_010265;partial=true;pseudo=true;start_range=.,177
NZ_PJUP02000032.1	Protein Homology	CDS	177	3326	.	-	0	ID=cds-CYJ03_RS10275;Parent=gene-CYJ03_RS10275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ03_RS10275;partial=true;product=SdrD B-like domain-containing protein;pseudo=true;start_range=.,177;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	3593	4519	.	-	.	ID=gene-CYJ03_RS10280;Name=CYJ03_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10280;old_locus_tag=CYJ03_010270
NZ_PJUP02000032.1	Protein Homology	CDS	3593	4519	.	-	0	ID=cds-WP_104052338.1;Parent=gene-CYJ03_RS10280;Dbxref=GenBank:WP_104052338.1;Name=WP_104052338.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613956.1;locus_tag=CYJ03_RS10280;product=CvfB family protein;protein_id=WP_104052338.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	4720	6330	.	+	.	ID=gene-CYJ03_RS10285;Name=CYJ03_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10285;old_locus_tag=CYJ03_010275
NZ_PJUP02000032.1	Protein Homology	CDS	4720	6330	.	+	0	ID=cds-WP_014613955.1;Parent=gene-CYJ03_RS10285;Dbxref=GenBank:WP_014613955.1;Name=WP_014613955.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=CYJ03_RS10285;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_014613955.1;transl_table=11
NZ_PJUP02000032.1	cmsearch	riboswitch	6587	6766	.	+	.	ID=id-NZ_PJUP02000032.1:6587..6766;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000032.1	RefSeq	gene	6971	7957	.	+	.	ID=gene-CYJ03_RS10290;Name=CYJ03_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10290;old_locus_tag=CYJ03_010280
NZ_PJUP02000032.1	Protein Homology	CDS	6971	7957	.	+	0	ID=cds-WP_104052339.1;Parent=gene-CYJ03_RS10290;Dbxref=GenBank:WP_104052339.1;Name=WP_104052339.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165353.1;locus_tag=CYJ03_RS10290;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_104052339.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	7961	8839	.	+	.	ID=gene-CYJ03_RS10295;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10295;old_locus_tag=CYJ03_010285
NZ_PJUP02000032.1	Protein Homology	CDS	7961	8839	.	+	0	ID=cds-WP_014613953.1;Parent=gene-CYJ03_RS10295;Dbxref=GenBank:WP_014613953.1;Name=WP_014613953.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165352.1;locus_tag=CYJ03_RS10295;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_014613953.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	8836	9558	.	+	.	ID=gene-CYJ03_RS10300;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10300;old_locus_tag=CYJ03_010290
NZ_PJUP02000032.1	Protein Homology	CDS	8836	9558	.	+	0	ID=cds-WP_015729105.1;Parent=gene-CYJ03_RS10300;Dbxref=GenBank:WP_015729105.1;Name=WP_015729105.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275807.1;locus_tag=CYJ03_RS10300;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_015729105.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	9578	10297	.	+	.	ID=gene-CYJ03_RS10305;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CYJ03_RS10305;old_locus_tag=CYJ03_010295
NZ_PJUP02000032.1	Protein Homology	CDS	9578	10297	.	+	0	ID=cds-WP_014613951.1;Parent=gene-CYJ03_RS10305;Dbxref=GenBank:WP_014613951.1;Name=WP_014613951.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613951.1;locus_tag=CYJ03_RS10305;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_014613951.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	10989	12143	.	+	.	ID=gene-CYJ03_RS10310;Name=CYJ03_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10310;old_locus_tag=CYJ03_010300
NZ_PJUP02000032.1	Protein Homology	CDS	10989	12143	.	+	0	ID=cds-WP_014613950.1;Parent=gene-CYJ03_RS10310;Dbxref=GenBank:WP_014613950.1;Name=WP_014613950.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613950.1;locus_tag=CYJ03_RS10310;product=M20 metallopeptidase family protein;protein_id=WP_014613950.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	12140	13219	.	+	.	ID=gene-CYJ03_RS10315;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CYJ03_RS10315;old_locus_tag=CYJ03_010305
NZ_PJUP02000032.1	Protein Homology	CDS	12140	13219	.	+	0	ID=cds-WP_037543065.1;Parent=gene-CYJ03_RS10315;Dbxref=GenBank:WP_037543065.1;Name=WP_037543065.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729107.1;locus_tag=CYJ03_RS10315;product=alanine racemase;protein_id=WP_037543065.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	13220	14485	.	+	.	ID=gene-CYJ03_RS10320;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10320;old_locus_tag=CYJ03_010310
NZ_PJUP02000032.1	Protein Homology	CDS	13220	14485	.	+	0	ID=cds-WP_101458315.1;Parent=gene-CYJ03_RS10320;Dbxref=GenBank:WP_101458315.1;Name=WP_101458315.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=CYJ03_RS10320;product=diaminopimelate decarboxylase;protein_id=WP_101458315.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	14607	14786	.	-	.	ID=gene-CYJ03_RS10325;Name=CYJ03_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10325;old_locus_tag=CYJ03_010315
NZ_PJUP02000032.1	Protein Homology	CDS	14607	14786	.	-	0	ID=cds-WP_070407448.1;Parent=gene-CYJ03_RS10325;Dbxref=GenBank:WP_070407448.1;Name=WP_070407448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729109.1;locus_tag=CYJ03_RS10325;product=hypothetical protein;protein_id=WP_070407448.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	15326	15526	.	-	.	ID=gene-CYJ03_RS10330;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=CYJ03_RS10330;old_locus_tag=CYJ03_010320
NZ_PJUP02000032.1	Protein Homology	CDS	15326	15526	.	-	0	ID=cds-WP_014613945.1;Parent=gene-CYJ03_RS10330;Dbxref=GenBank:WP_014613945.1;Name=WP_014613945.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CYJ03_RS10330;product=cold shock protein CspA;protein_id=WP_014613945.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	15719	16027	.	-	.	ID=gene-CYJ03_RS10335;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS10335;old_locus_tag=CYJ03_010325
NZ_PJUP02000032.1	Protein Homology	CDS	15719	16027	.	-	0	ID=cds-WP_014613944.1;Parent=gene-CYJ03_RS10335;Dbxref=GenBank:WP_014613944.1;Name=WP_014613944.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=CYJ03_RS10335;product=regulatory protein MsaA;protein_id=WP_014613944.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	16186	16458	.	+	.	ID=gene-CYJ03_RS10340;Name=CYJ03_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10340;old_locus_tag=CYJ03_010330
NZ_PJUP02000032.1	Protein Homology	CDS	16186	16458	.	+	0	ID=cds-WP_101457246.1;Parent=gene-CYJ03_RS10340;Dbxref=GenBank:WP_101457246.1;Name=WP_101457246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167657.1;locus_tag=CYJ03_RS10340;product=acylphosphatase;protein_id=WP_101457246.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	16471	17109	.	+	.	ID=gene-CYJ03_RS10345;Name=CYJ03_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10345;old_locus_tag=CYJ03_010335
NZ_PJUP02000032.1	Protein Homology	CDS	16471	17109	.	+	0	ID=cds-WP_014613942.1;Parent=gene-CYJ03_RS10345;Dbxref=GenBank:WP_014613942.1;Name=WP_014613942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165344.1;locus_tag=CYJ03_RS10345;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_014613942.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	17106	18272	.	+	.	ID=gene-CYJ03_RS10350;Name=CYJ03_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10350;old_locus_tag=CYJ03_010340
NZ_PJUP02000032.1	Protein Homology	CDS	17106	18272	.	+	0	ID=cds-WP_101457245.1;Parent=gene-CYJ03_RS10350;Dbxref=GenBank:WP_101457245.1;Name=WP_101457245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613941.1;locus_tag=CYJ03_RS10350;product=toxic anion resistance protein;protein_id=WP_101457245.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	18318	18461	.	-	.	ID=gene-CYJ03_RS12345;Name=CYJ03_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12345
NZ_PJUP02000032.1	GeneMarkS-2+	CDS	18318	18461	.	-	0	ID=cds-WP_015729111.1;Parent=gene-CYJ03_RS12345;Dbxref=GenBank:WP_015729111.1;Name=WP_015729111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12345;product=hypothetical protein;protein_id=WP_015729111.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	18507	18722	.	-	.	ID=gene-CYJ03_RS10355;Name=CYJ03_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10355;old_locus_tag=CYJ03_010345
NZ_PJUP02000032.1	Protein Homology	CDS	18507	18722	.	-	0	ID=cds-WP_101458281.1;Parent=gene-CYJ03_RS10355;Dbxref=GenBank:WP_101458281.1;Name=WP_101458281.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ03_RS10355;product=BCCT family transporter;protein_id=WP_101458281.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	18738	18935	.	-	.	ID=gene-CYJ03_RS12885;Name=CYJ03_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12885
NZ_PJUP02000032.1	Protein Homology	CDS	18738	18935	.	-	0	ID=cds-WP_110144899.1;Parent=gene-CYJ03_RS12885;Dbxref=GenBank:WP_110144899.1;Name=WP_110144899.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.8;locus_tag=CYJ03_RS12885;product=BCCT family transporter;protein_id=WP_110144899.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	19079	20425	.	-	.	ID=gene-CYJ03_RS10360;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=CYJ03_RS10360;old_locus_tag=CYJ03_010350
NZ_PJUP02000032.1	Protein Homology	CDS	19079	20425	.	-	0	ID=cds-WP_104052340.1;Parent=gene-CYJ03_RS10360;Dbxref=GenBank:WP_104052340.1;Name=WP_104052340.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CYJ03_RS10360;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_104052340.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	20543	22432	.	-	.	ID=gene-CYJ03_RS10365;Name=CYJ03_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10365;old_locus_tag=CYJ03_010355
NZ_PJUP02000032.1	Protein Homology	CDS	20543	22432	.	-	0	ID=cds-WP_101458282.1;Parent=gene-CYJ03_RS10365;Dbxref=GenBank:WP_101458282.1;Name=WP_101458282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729114.1;locus_tag=CYJ03_RS10365;product=vWA domain-containing protein;protein_id=WP_101458282.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	22444	23241	.	-	.	ID=gene-CYJ03_RS10370;Name=CYJ03_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10370;old_locus_tag=CYJ03_010360
NZ_PJUP02000032.1	Protein Homology	CDS	22444	23241	.	-	0	ID=cds-WP_014613938.1;Parent=gene-CYJ03_RS10370;Dbxref=GenBank:WP_014613938.1;Name=WP_014613938.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=CYJ03_RS10370;product=ATP-binding protein;protein_id=WP_014613938.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	23339	23542	.	-	.	ID=gene-CYJ03_RS10375;Name=CYJ03_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10375;old_locus_tag=CYJ03_010365
NZ_PJUP02000032.1	Protein Homology	CDS	23339	23542	.	-	0	ID=cds-WP_014613937.1;Parent=gene-CYJ03_RS10375;Dbxref=GenBank:WP_014613937.1;Name=WP_014613937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=CYJ03_RS10375;product=DUF6501 family protein;protein_id=WP_014613937.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	23546	24370	.	-	.	ID=gene-CYJ03_RS10380;Name=CYJ03_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10380;old_locus_tag=CYJ03_010370
NZ_PJUP02000032.1	Protein Homology	CDS	23546	24370	.	-	0	ID=cds-WP_101458283.1;Parent=gene-CYJ03_RS10380;Dbxref=GenBank:WP_101458283.1;Name=WP_101458283.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613936.1;locus_tag=CYJ03_RS10380;product=VOC family protein;protein_id=WP_101458283.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	24435	24674	.	-	.	ID=gene-CYJ03_RS10385;Name=CYJ03_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10385;old_locus_tag=CYJ03_010375
NZ_PJUP02000032.1	Protein Homology	CDS	24435	24674	.	-	0	ID=cds-WP_014613935.1;Parent=gene-CYJ03_RS10385;Dbxref=GenBank:WP_014613935.1;Name=WP_014613935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219603.1;locus_tag=CYJ03_RS10385;product=hypothetical protein;protein_id=WP_014613935.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	24873	26150	.	-	.	ID=gene-CYJ03_RS10390;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CYJ03_RS10390;old_locus_tag=CYJ03_010380
NZ_PJUP02000032.1	Protein Homology	CDS	24873	26150	.	-	0	ID=cds-WP_015729116.1;Parent=gene-CYJ03_RS10390;Dbxref=GenBank:WP_015729116.1;Name=WP_015729116.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729116.1;locus_tag=CYJ03_RS10390;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_015729116.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	26165	28951	.	-	.	ID=gene-CYJ03_RS10395;Name=CYJ03_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10395;old_locus_tag=CYJ03_010385
NZ_PJUP02000032.1	Protein Homology	CDS	26165	28951	.	-	0	ID=cds-WP_104030082.1;Parent=gene-CYJ03_RS10395;Dbxref=GenBank:WP_104030082.1;Name=WP_104030082.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=CYJ03_RS10395;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_104030082.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	29046	30413	.	-	.	ID=gene-CYJ03_RS10400;Name=CYJ03_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10400;old_locus_tag=CYJ03_010390
NZ_PJUP02000032.1	Protein Homology	CDS	29046	30413	.	-	0	ID=cds-WP_065354228.1;Parent=gene-CYJ03_RS10400;Dbxref=GenBank:WP_065354228.1;Name=WP_065354228.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729118.1;locus_tag=CYJ03_RS10400;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_065354228.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	30410	31087	.	-	.	ID=gene-CYJ03_RS10405;Name=CYJ03_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS10405;old_locus_tag=CYJ03_010395
NZ_PJUP02000032.1	Protein Homology	CDS	30410	31087	.	-	0	ID=cds-WP_014613931.1;Parent=gene-CYJ03_RS10405;Dbxref=GenBank:WP_014613931.1;Name=WP_014613931.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=CYJ03_RS10405;product=response regulator transcription factor;protein_id=WP_014613931.1;transl_table=11
NZ_PJUP02000032.1	RefSeq	pseudogene	31652	31777	.	-	.	ID=gene-CYJ03_RS12665;Name=CYJ03_RS12665;end_range=31777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12665;old_locus_tag=CYJ03_010400;partial=true;pseudo=true;start_range=.,31652
NZ_PJUP02000032.1	Protein Homology	CDS	31652	31777	.	-	0	ID=cds-CYJ03_RS12665;Parent=gene-CYJ03_RS12665;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=31777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612759.1;locus_tag=CYJ03_RS12665;partial=true;product=tagatose-bisphosphate aldolase;pseudo=true;start_range=.,31652;transl_table=11
NZ_PJUP02000032.1	RefSeq	pseudogene	31776	31970	.	-	.	ID=gene-CYJ03_RS10415;Name=CYJ03_RS10415;end_range=31970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10415;old_locus_tag=CYJ03_010405;partial=true;pseudo=true;start_range=.,31776
NZ_PJUP02000032.1	Protein Homology	CDS	31776	31970	.	-	0	ID=cds-CYJ03_RS10415;Parent=gene-CYJ03_RS10415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009228,GO:0051536;end_range=31970,.;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=CYJ03_RS10415;partial=true;product=phosphomethylpyrimidine synthase ThiC;pseudo=true;start_range=.,31776;transl_table=11
NZ_PJUP02000032.1	RefSeq	pseudogene	31951	32187	.	-	.	ID=gene-CYJ03_RS10420;Name=CYJ03_RS10420;end_range=32187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10420;old_locus_tag=CYJ03_010410;partial=true;pseudo=true;start_range=.,31951
NZ_PJUP02000032.1	Protein Homology	CDS	31951	32187	.	-	0	ID=cds-CYJ03_RS10420;Parent=gene-CYJ03_RS10420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=32187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499944.1;locus_tag=CYJ03_RS10420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,31951;transl_table=11
NZ_PJUP02000032.1	RefSeq	pseudogene	32180	32338	.	+	.	ID=gene-CYJ03_RS10425;Name=CYJ03_RS10425;end_range=32338,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS10425;old_locus_tag=CYJ03_010415;partial=true;pseudo=true;start_range=.,32180
NZ_PJUP02000032.1	Protein Homology	CDS	32180	32338	.	+	0	ID=cds-CYJ03_RS10425;Parent=gene-CYJ03_RS10425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=32338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=CYJ03_RS10425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,32180;transl_table=11
NZ_PJUP02000032.1	RefSeq	gene	32365	32434	.	-	.	ID=gene-CYJ03_RS12890;Name=CYJ03_RS12890;end_range=32434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12890;old_locus_tag=CYJ03_010420;partial=true
NZ_PJUP02000032.1	Protein Homology	CDS	32365	32434	.	-	1	ID=cds-WP_373408330.1;Parent=gene-CYJ03_RS12890;Dbxref=GenBank:WP_373408330.1;Name=WP_373408330.1;end_range=32434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CYJ03_RS12890;partial=true;product=hypothetical protein;protein_id=WP_373408330.1;transl_table=11
##sequence-region NZ_PJUP02000040.1 1 20863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000040.1	RefSeq	region	1	20863	.	+	.	ID=NZ_PJUP02000040.1:1..20863;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000040.1	RefSeq	gene	568	1374	.	-	.	ID=gene-CYJ03_RS11335;Name=CYJ03_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11335;old_locus_tag=CYJ03_011325
NZ_PJUP02000040.1	Protein Homology	CDS	568	1374	.	-	0	ID=cds-WP_099997495.1;Parent=gene-CYJ03_RS11335;Dbxref=GenBank:WP_099997495.1;Name=WP_099997495.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729750.1;locus_tag=CYJ03_RS11335;product=arylamine N-acetyltransferase family protein;protein_id=WP_099997495.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	1568	2893	.	-	.	ID=gene-CYJ03_RS11340;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11340;old_locus_tag=CYJ03_011330
NZ_PJUP02000040.1	Protein Homology	CDS	1568	2893	.	-	0	ID=cds-WP_099997496.1;Parent=gene-CYJ03_RS11340;Dbxref=GenBank:WP_099997496.1;Name=WP_099997496.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612809.1;locus_tag=CYJ03_RS11340;product=hypothiocyanous acid reductase MerA;protein_id=WP_099997496.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	2894	3316	.	-	.	ID=gene-CYJ03_RS11345;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=CYJ03_RS11345;old_locus_tag=CYJ03_011335
NZ_PJUP02000040.1	Protein Homology	CDS	2894	3316	.	-	0	ID=cds-WP_014612808.1;Parent=gene-CYJ03_RS11345;Dbxref=GenBank:WP_014612808.1;Name=WP_014612808.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168905.1;locus_tag=CYJ03_RS11345;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_014612808.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	3403	4065	.	-	.	ID=gene-CYJ03_RS11350;Name=CYJ03_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11350;old_locus_tag=CYJ03_011340
NZ_PJUP02000040.1	Protein Homology	CDS	3403	4065	.	-	0	ID=cds-WP_037542118.1;Parent=gene-CYJ03_RS11350;Dbxref=GenBank:WP_037542118.1;Name=WP_037542118.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612807.1;locus_tag=CYJ03_RS11350;product=ABC transporter ATP-binding protein;protein_id=WP_037542118.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	4078	5127	.	-	.	ID=gene-CYJ03_RS11355;Name=CYJ03_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11355;old_locus_tag=CYJ03_011345
NZ_PJUP02000040.1	Protein Homology	CDS	4078	5127	.	-	0	ID=cds-WP_015729754.1;Parent=gene-CYJ03_RS11355;Dbxref=GenBank:WP_015729754.1;Name=WP_015729754.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=CYJ03_RS11355;product=ABC transporter permease;protein_id=WP_015729754.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	5259	6593	.	-	.	ID=gene-CYJ03_RS11360;Name=CYJ03_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11360;old_locus_tag=CYJ03_011350
NZ_PJUP02000040.1	Protein Homology	CDS	5259	6593	.	-	0	ID=cds-WP_101457151.1;Parent=gene-CYJ03_RS11360;Dbxref=GenBank:WP_101457151.1;Name=WP_101457151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729755.1;locus_tag=CYJ03_RS11360;product=nucleoside recognition domain-containing protein;protein_id=WP_101457151.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	6587	7696	.	-	.	ID=gene-CYJ03_RS11365;Name=CYJ03_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11365;old_locus_tag=CYJ03_011355
NZ_PJUP02000040.1	Protein Homology	CDS	6587	7696	.	-	0	ID=cds-WP_101457150.1;Parent=gene-CYJ03_RS11365;Dbxref=GenBank:WP_101457150.1;Name=WP_101457150.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168901.1;locus_tag=CYJ03_RS11365;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_101457150.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	7938	9533	.	-	.	ID=gene-CYJ03_RS11370;Name=CYJ03_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11370;old_locus_tag=CYJ03_011360
NZ_PJUP02000040.1	Protein Homology	CDS	7938	9533	.	-	0	ID=cds-WP_101457149.1;Parent=gene-CYJ03_RS11370;Dbxref=GenBank:WP_101457149.1;Name=WP_101457149.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612803.1;locus_tag=CYJ03_RS11370;product=xylulokinase;protein_id=WP_101457149.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	9749	10906	.	-	.	ID=gene-CYJ03_RS11375;Name=CYJ03_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11375;old_locus_tag=CYJ03_011365
NZ_PJUP02000040.1	Protein Homology	CDS	9749	10906	.	-	0	ID=cds-WP_014612802.1;Parent=gene-CYJ03_RS11375;Dbxref=GenBank:WP_014612802.1;Name=WP_014612802.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612802.1;locus_tag=CYJ03_RS11375;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014612802.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	10969	12345	.	-	.	ID=gene-CYJ03_RS11380;Name=CYJ03_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11380;old_locus_tag=CYJ03_011370
NZ_PJUP02000040.1	Protein Homology	CDS	10969	12345	.	-	0	ID=cds-WP_014612801.1;Parent=gene-CYJ03_RS11380;Dbxref=GenBank:WP_014612801.1;Name=WP_014612801.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612801.1;locus_tag=CYJ03_RS11380;product=sodium:solute symporter family protein;protein_id=WP_014612801.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	13313	13759	.	-	.	ID=gene-CYJ03_RS11385;Name=CYJ03_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11385;old_locus_tag=CYJ03_011375
NZ_PJUP02000040.1	Protein Homology	CDS	13313	13759	.	-	0	ID=cds-WP_014612798.1;Parent=gene-CYJ03_RS11385;Dbxref=GenBank:WP_014612798.1;Name=WP_014612798.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166850.1;locus_tag=CYJ03_RS11385;product=Dps family protein;protein_id=WP_014612798.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	13881	14204	.	-	.	ID=gene-CYJ03_RS11390;Name=CYJ03_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11390;old_locus_tag=CYJ03_011380
NZ_PJUP02000040.1	Protein Homology	CDS	13881	14204	.	-	0	ID=cds-WP_101457148.1;Parent=gene-CYJ03_RS11390;Dbxref=GenBank:WP_101457148.1;Name=WP_101457148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612797.1;locus_tag=CYJ03_RS11390;product=hypothetical protein;protein_id=WP_101457148.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	14420	15910	.	-	.	ID=gene-CYJ03_RS11395;Name=CYJ03_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11395;old_locus_tag=CYJ03_011385
NZ_PJUP02000040.1	Protein Homology	CDS	14420	15910	.	-	0	ID=cds-WP_014612796.1;Parent=gene-CYJ03_RS11395;Dbxref=GenBank:WP_014612796.1;Name=WP_014612796.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=CYJ03_RS11395;product=catalase;protein_id=WP_014612796.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	16158	16688	.	-	.	ID=gene-CYJ03_RS11400;Name=CYJ03_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11400;old_locus_tag=CYJ03_011390
NZ_PJUP02000040.1	Protein Homology	CDS	16158	16688	.	-	0	ID=cds-WP_101457147.1;Parent=gene-CYJ03_RS11400;Dbxref=GenBank:WP_101457147.1;Name=WP_101457147.1;Ontology_term=GO:0016151,GO:0016765;gbkey=CDS;go_function=nickel cation binding|0016151||IEA,transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612795.1;locus_tag=CYJ03_RS11400;product=YfiT family bacillithiol transferase;protein_id=WP_101457147.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	17135	17569	.	+	.	ID=gene-CYJ03_RS11405;Name=CYJ03_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11405;old_locus_tag=CYJ03_011395
NZ_PJUP02000040.1	Protein Homology	CDS	17135	17569	.	+	0	ID=cds-WP_014612794.1;Parent=gene-CYJ03_RS11405;Dbxref=GenBank:WP_014612794.1;Name=WP_014612794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=CYJ03_RS11405;product=Hsp20/alpha crystallin family protein;protein_id=WP_014612794.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	17944	18252	.	+	.	ID=gene-CYJ03_RS11410;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=CYJ03_RS11410;old_locus_tag=CYJ03_011400
NZ_PJUP02000040.1	Protein Homology	CDS	17944	18252	.	+	0	ID=cds-WP_101457146.1;Parent=gene-CYJ03_RS11410;Dbxref=GenBank:WP_101457146.1;Name=WP_101457146.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612793.1;locus_tag=CYJ03_RS11410;product=SPIN family peroxidase inhibitor;protein_id=WP_101457146.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	18515	19942	.	+	.	ID=gene-CYJ03_RS11415;Name=CYJ03_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11415;old_locus_tag=CYJ03_011405
NZ_PJUP02000040.1	Protein Homology	CDS	18515	19942	.	+	0	ID=cds-WP_104052373.1;Parent=gene-CYJ03_RS11415;Dbxref=GenBank:WP_104052373.1;Name=WP_104052373.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612792.1;locus_tag=CYJ03_RS11415;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_104052373.1;transl_table=11
NZ_PJUP02000040.1	RefSeq	gene	20027	20443	.	-	.	ID=gene-CYJ03_RS11420;Name=CYJ03_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11420;old_locus_tag=CYJ03_011410
NZ_PJUP02000040.1	Protein Homology	CDS	20027	20443	.	-	0	ID=cds-WP_014612791.1;Parent=gene-CYJ03_RS11420;Dbxref=GenBank:WP_014612791.1;Name=WP_014612791.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612791.1;locus_tag=CYJ03_RS11420;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014612791.1;transl_table=11
##sequence-region NZ_PJUP02000004.1 1 117264
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000004.1	RefSeq	region	1	117264	.	+	.	ID=NZ_PJUP02000004.1:1..117264;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000004.1	RefSeq	gene	282	1520	.	+	.	ID=gene-CYJ03_RS02105;Name=CYJ03_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02105;old_locus_tag=CYJ03_002100
NZ_PJUP02000004.1	Protein Homology	CDS	282	1520	.	+	0	ID=cds-WP_104052088.1;Parent=gene-CYJ03_RS02105;Dbxref=GenBank:WP_104052088.1;Name=WP_104052088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176720.1;locus_tag=CYJ03_RS02105;product=AIPR family protein;protein_id=WP_104052088.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	1811	2092	.	-	.	ID=gene-CYJ03_RS12720;Name=CYJ03_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12720
NZ_PJUP02000004.1	Protein Homology	CDS	1811	2092	.	-	0	ID=cds-WP_308629196.1;Parent=gene-CYJ03_RS12720;Dbxref=GenBank:WP_308629196.1;Name=WP_308629196.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.7;locus_tag=CYJ03_RS12720;product=GNAT family N-acetyltransferase;protein_id=WP_308629196.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	2437	2655	.	+	.	ID=gene-CYJ03_RS02115;Name=CYJ03_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02115;old_locus_tag=CYJ03_002110
NZ_PJUP02000004.1	GeneMarkS-2+	CDS	2437	2655	.	+	0	ID=cds-WP_104052089.1;Parent=gene-CYJ03_RS02115;Dbxref=GenBank:WP_104052089.1;Name=WP_104052089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS02115;product=hypothetical protein;protein_id=WP_104052089.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	2694	2870	.	+	.	ID=gene-CYJ03_RS12255;Name=CYJ03_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12255;old_locus_tag=CYJ03_002115
NZ_PJUP02000004.1	GeneMarkS-2+	CDS	2694	2870	.	+	0	ID=cds-WP_181137772.1;Parent=gene-CYJ03_RS12255;Dbxref=GenBank:WP_181137772.1;Name=WP_181137772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12255;product=hypothetical protein;protein_id=WP_181137772.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	2884	3069	.	+	.	ID=gene-CYJ03_RS02125;Name=CYJ03_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02125;old_locus_tag=CYJ03_002120
NZ_PJUP02000004.1	Protein Homology	CDS	2884	3069	.	+	0	ID=cds-WP_104052091.1;Parent=gene-CYJ03_RS02125;Dbxref=GenBank:WP_104052091.1;Name=WP_104052091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612690.1;locus_tag=CYJ03_RS02125;product=hypothetical protein;protein_id=WP_104052091.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	3192	3623	.	+	.	ID=gene-CYJ03_RS02130;Name=CYJ03_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02130;old_locus_tag=CYJ03_002125
NZ_PJUP02000004.1	Protein Homology	CDS	3192	3623	.	+	0	ID=cds-WP_096543367.1;Parent=gene-CYJ03_RS02130;Dbxref=GenBank:WP_096543367.1;Name=WP_096543367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042545.4;locus_tag=CYJ03_RS02130;product=HTH domain-containing protein;protein_id=WP_096543367.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	3629	4558	.	+	.	ID=gene-CYJ03_RS02135;Name=CYJ03_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02135;old_locus_tag=CYJ03_002130
NZ_PJUP02000004.1	Protein Homology	CDS	3629	4558	.	+	0	ID=cds-WP_104052092.1;Parent=gene-CYJ03_RS02135;Dbxref=GenBank:WP_104052092.1;Name=WP_104052092.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=CYJ03_RS02135;product=IS3 family transposase;protein_id=WP_104052092.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	5036	5227	.	-	.	ID=gene-CYJ03_RS12775;Name=CYJ03_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12775;old_locus_tag=CYJ03_002135
NZ_PJUP02000004.1	Protein Homology	CDS	5036	5227	.	-	0	ID=cds-WP_104052093.1;Parent=gene-CYJ03_RS12775;Dbxref=GenBank:WP_104052093.1;Name=WP_104052093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.7;locus_tag=CYJ03_RS12775;product=IS3 family transposase;protein_id=WP_104052093.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	5406	5768	.	+	.	ID=gene-CYJ03_RS12485;Name=CYJ03_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12485
NZ_PJUP02000004.1	Protein Homology	CDS	5406	5768	.	+	0	ID=cds-WP_258058095.1;Parent=gene-CYJ03_RS12485;Dbxref=GenBank:WP_258058095.1;Name=WP_258058095.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506795.1;locus_tag=CYJ03_RS12485;product=UTRA domain-containing protein;protein_id=WP_258058095.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	6063	6590	.	+	.	ID=gene-CYJ03_RS02160;Name=CYJ03_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02160;old_locus_tag=CYJ03_002150
NZ_PJUP02000004.1	GeneMarkS-2+	CDS	6063	6590	.	+	0	ID=cds-WP_104052095.1;Parent=gene-CYJ03_RS02160;Dbxref=GenBank:WP_104052095.1;Name=WP_104052095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS02160;product=hypothetical protein;protein_id=WP_104052095.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	6728	7075	.	+	.	ID=gene-CYJ03_RS02165;Name=CYJ03_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02165;old_locus_tag=CYJ03_002155
NZ_PJUP02000004.1	Protein Homology	CDS	6728	7075	.	+	0	ID=cds-WP_096548371.1;Parent=gene-CYJ03_RS02165;Dbxref=GenBank:WP_096548371.1;Name=WP_096548371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025887.7;locus_tag=CYJ03_RS02165;product=nuclear transport factor 2 family protein;protein_id=WP_096548371.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	7719	9449	.	+	.	ID=gene-CYJ03_RS02175;Name=CYJ03_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02175;old_locus_tag=CYJ03_002165
NZ_PJUP02000004.1	Protein Homology	CDS	7719	9449	.	+	0	ID=cds-WP_104052096.1;Parent=gene-CYJ03_RS02175;Dbxref=GenBank:WP_104052096.1;Name=WP_104052096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274570.1;locus_tag=CYJ03_RS02175;product=DUF2075 domain-containing protein;protein_id=WP_104052096.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	9442	9780	.	+	.	ID=gene-CYJ03_RS02180;Name=CYJ03_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02180;old_locus_tag=CYJ03_002170
NZ_PJUP02000004.1	Protein Homology	CDS	9442	9780	.	+	0	ID=cds-WP_096548369.1;Parent=gene-CYJ03_RS02180;Dbxref=GenBank:WP_096548369.1;Name=WP_096548369.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510671.1;locus_tag=CYJ03_RS02180;product=nucleotide pyrophosphohydrolase;protein_id=WP_096548369.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	10236	11351	.	+	.	ID=gene-CYJ03_RS02185;Name=CYJ03_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02185;old_locus_tag=CYJ03_002175
NZ_PJUP02000004.1	Protein Homology	CDS	10236	11351	.	+	0	ID=cds-WP_014612691.1;Parent=gene-CYJ03_RS02185;Dbxref=GenBank:WP_014612691.1;Name=WP_014612691.1;Ontology_term=GO:0042853,GO:0000286,GO:0051287;gbkey=CDS;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA,NAD binding|0051287||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166648.1;locus_tag=CYJ03_RS02185;product=alanine dehydrogenase;protein_id=WP_014612691.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	11388	12428	.	+	.	ID=gene-CYJ03_RS02190;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CYJ03_RS02190;old_locus_tag=CYJ03_002180
NZ_PJUP02000004.1	Protein Homology	CDS	11388	12428	.	+	0	ID=cds-WP_065353919.1;Parent=gene-CYJ03_RS02190;Dbxref=GenBank:WP_065353919.1;Name=WP_065353919.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210816.1;locus_tag=CYJ03_RS02190;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_065353919.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	12461	13783	.	+	.	ID=gene-CYJ03_RS02195;Name=CYJ03_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02195;old_locus_tag=CYJ03_002185
NZ_PJUP02000004.1	Protein Homology	CDS	12461	13783	.	+	0	ID=cds-WP_014612693.1;Parent=gene-CYJ03_RS02195;Dbxref=GenBank:WP_014612693.1;Name=WP_014612693.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612693.1;locus_tag=CYJ03_RS02195;product=APC family permease;protein_id=WP_014612693.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	14006	16054	.	+	.	ID=gene-CYJ03_RS02200;Name=CYJ03_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02200;old_locus_tag=CYJ03_002190
NZ_PJUP02000004.1	Protein Homology	CDS	14006	16054	.	+	0	ID=cds-WP_065353920.1;Parent=gene-CYJ03_RS02200;Dbxref=GenBank:WP_065353920.1;Name=WP_065353920.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=CYJ03_RS02200;product=heavy metal translocating P-type ATPase;protein_id=WP_065353920.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	16237	16809	.	+	.	ID=gene-CYJ03_RS02205;Name=CYJ03_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02205;old_locus_tag=CYJ03_002195
NZ_PJUP02000004.1	Protein Homology	CDS	16237	16809	.	+	0	ID=cds-WP_065353921.1;Parent=gene-CYJ03_RS02205;Dbxref=GenBank:WP_065353921.1;Name=WP_065353921.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612695.1;locus_tag=CYJ03_RS02205;product=helix-turn-helix domain-containing protein;protein_id=WP_065353921.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	17329	18033	.	-	.	ID=gene-CYJ03_RS02210;Name=CYJ03_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02210;old_locus_tag=CYJ03_002200
NZ_PJUP02000004.1	Protein Homology	CDS	17329	18033	.	-	0	ID=cds-WP_258058096.1;Parent=gene-CYJ03_RS02210;Dbxref=GenBank:WP_258058096.1;Name=WP_258058096.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=CYJ03_RS02210;product=GntR family transcriptional regulator;protein_id=WP_258058096.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	18357	19799	.	+	.	ID=gene-CYJ03_RS02215;Name=CYJ03_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02215;old_locus_tag=CYJ03_002205
NZ_PJUP02000004.1	Protein Homology	CDS	18357	19799	.	+	0	ID=cds-WP_014612701.1;Parent=gene-CYJ03_RS02215;Dbxref=GenBank:WP_014612701.1;Name=WP_014612701.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165696.1;locus_tag=CYJ03_RS02215;product=6-phospho-beta-glucosidase;protein_id=WP_014612701.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	20654	23218	.	+	.	ID=gene-CYJ03_RS02220;Name=spsL;gbkey=Gene;gene=spsL;gene_biotype=protein_coding;locus_tag=CYJ03_RS02220;old_locus_tag=CYJ03_002210
NZ_PJUP02000004.1	Protein Homology	CDS	20654	23218	.	+	0	ID=cds-WP_104052098.1;Parent=gene-CYJ03_RS02220;Dbxref=GenBank:WP_104052098.1;Name=WP_104052098.1;gbkey=CDS;gene=spsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612703.1;locus_tag=CYJ03_RS02220;product=fibronectin-binding surface protein SpsL;protein_id=WP_104052098.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	23568	24992	.	-	.	ID=gene-CYJ03_RS02225;Name=CYJ03_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02225;old_locus_tag=CYJ03_002215
NZ_PJUP02000004.1	Protein Homology	CDS	23568	24992	.	-	0	ID=cds-WP_104052099.1;Parent=gene-CYJ03_RS02225;Dbxref=GenBank:WP_104052099.1;Name=WP_104052099.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612704.1;locus_tag=CYJ03_RS02225;product=cryptochrome/photolyase family protein;protein_id=WP_104052099.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	25079	25429	.	-	.	ID=gene-CYJ03_RS02230;Name=CYJ03_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02230;old_locus_tag=CYJ03_002220
NZ_PJUP02000004.1	Protein Homology	CDS	25079	25429	.	-	0	ID=cds-WP_104052100.1;Parent=gene-CYJ03_RS02230;Dbxref=GenBank:WP_104052100.1;Name=WP_104052100.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729806.1;locus_tag=CYJ03_RS02230;product=helix-turn-helix domain-containing protein;protein_id=WP_104052100.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	25507	26187	.	+	.	ID=gene-CYJ03_RS02235;Name=CYJ03_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02235;old_locus_tag=CYJ03_002225
NZ_PJUP02000004.1	Protein Homology	CDS	25507	26187	.	+	0	ID=cds-WP_096636771.1;Parent=gene-CYJ03_RS02235;Dbxref=GenBank:WP_096636771.1;Name=WP_096636771.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612706.1;locus_tag=CYJ03_RS02235;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_096636771.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	26212	26877	.	+	.	ID=gene-CYJ03_RS02240;Name=CYJ03_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02240;old_locus_tag=CYJ03_002230
NZ_PJUP02000004.1	Protein Homology	CDS	26212	26877	.	+	0	ID=cds-WP_104052101.1;Parent=gene-CYJ03_RS02240;Dbxref=GenBank:WP_104052101.1;Name=WP_104052101.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723717.1;locus_tag=CYJ03_RS02240;product=SDR family oxidoreductase;protein_id=WP_104052101.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	26881	27885	.	+	.	ID=gene-CYJ03_RS02245;Name=CYJ03_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02245;old_locus_tag=CYJ03_002235
NZ_PJUP02000004.1	Protein Homology	CDS	26881	27885	.	+	0	ID=cds-WP_104052102.1;Parent=gene-CYJ03_RS02245;Dbxref=GenBank:WP_104052102.1;Name=WP_104052102.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434486.1;locus_tag=CYJ03_RS02245;product=NADP-dependent oxidoreductase;protein_id=WP_104052102.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	27896	28252	.	+	.	ID=gene-CYJ03_RS02250;Name=CYJ03_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02250;old_locus_tag=CYJ03_002240
NZ_PJUP02000004.1	Protein Homology	CDS	27896	28252	.	+	0	ID=cds-WP_014612709.1;Parent=gene-CYJ03_RS02250;Dbxref=GenBank:WP_014612709.1;Name=WP_014612709.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467555.1;locus_tag=CYJ03_RS02250;product=DoxX family protein;protein_id=WP_014612709.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	pseudogene	28437	28574	.	+	.	ID=gene-CYJ03_RS02255;Name=CYJ03_RS02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS02255;old_locus_tag=CYJ03_002245;partial=true;pseudo=true;start_range=.,28437
NZ_PJUP02000004.1	Protein Homology	CDS	28437	28574	.	+	0	ID=cds-CYJ03_RS02255;Parent=gene-CYJ03_RS02255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004229042.1;locus_tag=CYJ03_RS02255;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,28437;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	28765	29898	.	+	.	ID=gene-CYJ03_RS02260;Name=CYJ03_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02260;old_locus_tag=CYJ03_002250
NZ_PJUP02000004.1	Protein Homology	CDS	28765	29898	.	+	0	ID=cds-WP_014612710.1;Parent=gene-CYJ03_RS02260;Dbxref=GenBank:WP_014612710.1;Name=WP_014612710.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729803.1;locus_tag=CYJ03_RS02260;product=Fic family protein;protein_id=WP_014612710.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	30464	31630	.	+	.	ID=gene-CYJ03_RS02265;Name=CYJ03_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02265;old_locus_tag=CYJ03_002255
NZ_PJUP02000004.1	Protein Homology	CDS	30464	31630	.	+	0	ID=cds-WP_104052103.1;Parent=gene-CYJ03_RS02265;Dbxref=GenBank:WP_104052103.1;Name=WP_104052103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612712.1;locus_tag=CYJ03_RS02265;product=ArgE/DapE family deacylase;protein_id=WP_104052103.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	31878	32348	.	+	.	ID=gene-CYJ03_RS02270;Name=CYJ03_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02270;old_locus_tag=CYJ03_002260
NZ_PJUP02000004.1	Protein Homology	CDS	31878	32348	.	+	0	ID=cds-WP_020220081.1;Parent=gene-CYJ03_RS02270;Dbxref=GenBank:WP_020220081.1;Name=WP_020220081.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612713.1;locus_tag=CYJ03_RS02270;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_020220081.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	32512	33246	.	-	.	ID=gene-CYJ03_RS02275;Name=CYJ03_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02275;old_locus_tag=CYJ03_002265
NZ_PJUP02000004.1	Protein Homology	CDS	32512	33246	.	-	0	ID=cds-WP_096548359.1;Parent=gene-CYJ03_RS02275;Dbxref=GenBank:WP_096548359.1;Name=WP_096548359.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220080.1;locus_tag=CYJ03_RS02275;product=NAD-dependent protein deacylase;protein_id=WP_096548359.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	33710	34438	.	-	.	ID=gene-CYJ03_RS02280;Name=CYJ03_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02280;old_locus_tag=CYJ03_002270
NZ_PJUP02000004.1	Protein Homology	CDS	33710	34438	.	-	0	ID=cds-WP_015729800.1;Parent=gene-CYJ03_RS02280;Dbxref=GenBank:WP_015729800.1;Name=WP_015729800.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165719.1;locus_tag=CYJ03_RS02280;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015729800.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	34457	35398	.	-	.	ID=gene-CYJ03_RS02285;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CYJ03_RS02285;old_locus_tag=CYJ03_002275
NZ_PJUP02000004.1	Protein Homology	CDS	34457	35398	.	-	0	ID=cds-WP_014612716.1;Parent=gene-CYJ03_RS02285;Dbxref=GenBank:WP_014612716.1;Name=WP_014612716.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612716.1;locus_tag=CYJ03_RS02285;product=carbamate kinase;protein_id=WP_014612716.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	35414	36844	.	-	.	ID=gene-CYJ03_RS02290;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CYJ03_RS02290;old_locus_tag=CYJ03_002280
NZ_PJUP02000004.1	Protein Homology	CDS	35414	36844	.	-	0	ID=cds-WP_014612717.1;Parent=gene-CYJ03_RS02290;Dbxref=GenBank:WP_014612717.1;Name=WP_014612717.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612717.1;locus_tag=CYJ03_RS02290;product=arginine-ornithine antiporter;protein_id=WP_014612717.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	36965	37972	.	-	.	ID=gene-CYJ03_RS02295;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CYJ03_RS02295;old_locus_tag=CYJ03_002285
NZ_PJUP02000004.1	Protein Homology	CDS	36965	37972	.	-	0	ID=cds-WP_014612718.1;Parent=gene-CYJ03_RS02295;Dbxref=GenBank:WP_014612718.1;Name=WP_014612718.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=CYJ03_RS02295;product=ornithine carbamoyltransferase;protein_id=WP_014612718.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	38009	39244	.	-	.	ID=gene-CYJ03_RS02300;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02300;old_locus_tag=CYJ03_002290
NZ_PJUP02000004.1	Protein Homology	CDS	38009	39244	.	-	0	ID=cds-WP_014612719.1;Parent=gene-CYJ03_RS02300;Dbxref=GenBank:WP_014612719.1;Name=WP_014612719.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CYJ03_RS02300;product=arginine deiminase;protein_id=WP_014612719.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	39632	40111	.	+	.	ID=gene-CYJ03_RS02305;Name=CYJ03_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02305;old_locus_tag=CYJ03_002295
NZ_PJUP02000004.1	Protein Homology	CDS	39632	40111	.	+	0	ID=cds-WP_101458216.1;Parent=gene-CYJ03_RS02305;Dbxref=GenBank:WP_101458216.1;Name=WP_101458216.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729798.1;locus_tag=CYJ03_RS02305;product=arginine repressor;protein_id=WP_101458216.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	40229	41101	.	+	.	ID=gene-CYJ03_RS02310;Name=CYJ03_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02310;old_locus_tag=CYJ03_002300
NZ_PJUP02000004.1	Protein Homology	CDS	40229	41101	.	+	0	ID=cds-WP_101458215.1;Parent=gene-CYJ03_RS02310;Dbxref=GenBank:WP_101458215.1;Name=WP_101458215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612721.1;locus_tag=CYJ03_RS02310;product=alpha/beta hydrolase;protein_id=WP_101458215.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	pseudogene	41229	41303	.	-	.	ID=gene-CYJ03_RS02315;Name=CYJ03_RS02315;end_range=41303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS02315;old_locus_tag=CYJ03_002305;partial=true;pseudo=true
NZ_PJUP02000004.1	Protein Homology	CDS	41229	41303	.	-	0	ID=cds-CYJ03_RS02315;Parent=gene-CYJ03_RS02315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499844.1;locus_tag=CYJ03_RS02315;partial=true;product=DNA-binding response regulator;pseudo=true;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	41333	41656	.	-	.	ID=gene-CYJ03_RS02320;Name=CYJ03_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02320;old_locus_tag=CYJ03_002310
NZ_PJUP02000004.1	Protein Homology	CDS	41333	41656	.	-	0	ID=cds-WP_014612722.1;Parent=gene-CYJ03_RS02320;Dbxref=GenBank:WP_014612722.1;Name=WP_014612722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165730.1;locus_tag=CYJ03_RS02320;product=magnetosome magnetite crystal formation protein family;protein_id=WP_014612722.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	42250	43083	.	+	.	ID=gene-CYJ03_RS02325;Name=CYJ03_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02325;old_locus_tag=CYJ03_002315
NZ_PJUP02000004.1	Protein Homology	CDS	42250	43083	.	+	0	ID=cds-WP_104052104.1;Parent=gene-CYJ03_RS02325;Dbxref=GenBank:WP_104052104.1;Name=WP_104052104.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729791.1;locus_tag=CYJ03_RS02325;product=peptidoglycan recognition protein family protein;protein_id=WP_104052104.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	43137	43637	.	-	.	ID=gene-CYJ03_RS02330;Name=CYJ03_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02330;old_locus_tag=CYJ03_002320
NZ_PJUP02000004.1	Protein Homology	CDS	43137	43637	.	-	0	ID=cds-WP_104052105.1;Parent=gene-CYJ03_RS02330;Dbxref=GenBank:WP_104052105.1;Name=WP_104052105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612724.1;locus_tag=CYJ03_RS02330;product=YagU family protein;protein_id=WP_104052105.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	44020	44577	.	+	.	ID=gene-CYJ03_RS02335;Name=CYJ03_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02335;old_locus_tag=CYJ03_002325
NZ_PJUP02000004.1	Protein Homology	CDS	44020	44577	.	+	0	ID=cds-WP_014612725.1;Parent=gene-CYJ03_RS02335;Dbxref=GenBank:WP_014612725.1;Name=WP_014612725.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165735.1;locus_tag=CYJ03_RS02335;product=NADPH-dependent FMN reductase;protein_id=WP_014612725.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	45238	49044	.	+	.	ID=gene-CYJ03_RS02340;Name=CYJ03_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02340;old_locus_tag=CYJ03_002330
NZ_PJUP02000004.1	Protein Homology	CDS	45238	49044	.	+	0	ID=cds-WP_104052106.1;Parent=gene-CYJ03_RS02340;Dbxref=GenBank:WP_104052106.1;Name=WP_104052106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612726.1;locus_tag=CYJ03_RS02340;product=Rib/alpha-like domain-containing protein;protein_id=WP_104052106.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	49246	49527	.	+	.	ID=gene-CYJ03_RS02345;Name=CYJ03_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02345;old_locus_tag=CYJ03_002335
NZ_PJUP02000004.1	Protein Homology	CDS	49246	49527	.	+	0	ID=cds-WP_015729789.1;Parent=gene-CYJ03_RS02345;Dbxref=GenBank:WP_015729789.1;Name=WP_015729789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612727.1;locus_tag=CYJ03_RS02345;product=hypothetical protein;protein_id=WP_015729789.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	49598	50488	.	+	.	ID=gene-CYJ03_RS02350;Name=CYJ03_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02350;old_locus_tag=CYJ03_002340
NZ_PJUP02000004.1	Protein Homology	CDS	49598	50488	.	+	0	ID=cds-WP_104052107.1;Parent=gene-CYJ03_RS02350;Dbxref=GenBank:WP_104052107.1;Name=WP_104052107.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724039.1;locus_tag=CYJ03_RS02350;product=LysR family transcriptional regulator;protein_id=WP_104052107.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	50485	51873	.	-	.	ID=gene-CYJ03_RS02355;Name=CYJ03_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02355;old_locus_tag=CYJ03_002345
NZ_PJUP02000004.1	Protein Homology	CDS	50485	51873	.	-	0	ID=cds-WP_104052108.1;Parent=gene-CYJ03_RS02355;Dbxref=GenBank:WP_104052108.1;Name=WP_104052108.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020007932.1;locus_tag=CYJ03_RS02355;product=YfcC family protein;protein_id=WP_104052108.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	51895	53079	.	-	.	ID=gene-CYJ03_RS02360;Name=CYJ03_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02360;old_locus_tag=CYJ03_002350
NZ_PJUP02000004.1	Protein Homology	CDS	51895	53079	.	-	0	ID=cds-WP_104052109.1;Parent=gene-CYJ03_RS02360;Dbxref=GenBank:WP_104052109.1;Name=WP_104052109.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425818.1;locus_tag=CYJ03_RS02360;product=M20 family metallopeptidase;protein_id=WP_104052109.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	direct_repeat	53756	54957	.	+	.	ID=id-NZ_PJUP02000004.1:53756..54957;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=53756..53791;rpt_unit_seq=aatcgaatagagaccccgatattaggggacgagaac
NZ_PJUP02000004.1	RefSeq	gene	55318	56226	.	+	.	ID=gene-CYJ03_RS02365;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=CYJ03_RS02365;old_locus_tag=CYJ03_002355
NZ_PJUP02000004.1	Protein Homology	CDS	55318	56226	.	+	0	ID=cds-WP_104052110.1;Parent=gene-CYJ03_RS02365;Dbxref=GenBank:WP_104052110.1;Name=WP_104052110.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502667.1;locus_tag=CYJ03_RS02365;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_104052110.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	56226	56531	.	+	.	ID=gene-CYJ03_RS02370;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CYJ03_RS02370;old_locus_tag=CYJ03_002360
NZ_PJUP02000004.1	Protein Homology	CDS	56226	56531	.	+	0	ID=cds-WP_104052111.1;Parent=gene-CYJ03_RS02370;Dbxref=GenBank:WP_104052111.1;Name=WP_104052111.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469399.1;locus_tag=CYJ03_RS02370;product=CRISPR-associated endonuclease Cas2;protein_id=WP_104052111.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	56544	58817	.	+	.	ID=gene-CYJ03_RS02375;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=CYJ03_RS02375;old_locus_tag=CYJ03_002365
NZ_PJUP02000004.1	Protein Homology	CDS	56544	58817	.	+	0	ID=cds-WP_104052112.1;Parent=gene-CYJ03_RS02375;Dbxref=GenBank:WP_104052112.1;Name=WP_104052112.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas10;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168787.1;locus_tag=CYJ03_RS02375;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_104052112.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	58823	59248	.	+	.	ID=gene-CYJ03_RS02380;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=CYJ03_RS02380;old_locus_tag=CYJ03_002370
NZ_PJUP02000004.1	Protein Homology	CDS	58823	59248	.	+	0	ID=cds-WP_104052113.1;Parent=gene-CYJ03_RS02380;Dbxref=GenBank:WP_104052113.1;Name=WP_104052113.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599362.1;locus_tag=CYJ03_RS02380;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_104052113.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	59250	59894	.	+	.	ID=gene-CYJ03_RS02385;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=CYJ03_RS02385;old_locus_tag=CYJ03_002375
NZ_PJUP02000004.1	Protein Homology	CDS	59250	59894	.	+	0	ID=cds-WP_104052114.1;Parent=gene-CYJ03_RS02385;Dbxref=GenBank:WP_104052114.1;Name=WP_104052114.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486018.1;locus_tag=CYJ03_RS02385;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_104052114.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	59904	60812	.	+	.	ID=gene-CYJ03_RS02390;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=protein_coding;locus_tag=CYJ03_RS02390;old_locus_tag=CYJ03_002380
NZ_PJUP02000004.1	Protein Homology	CDS	59904	60812	.	+	0	ID=cds-WP_104052115.1;Parent=gene-CYJ03_RS02390;Dbxref=GenBank:WP_104052115.1;Name=WP_104052115.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502663.1;locus_tag=CYJ03_RS02390;product=type III-A CRISPR-associated RAMP protein Csm4;protein_id=WP_104052115.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	60815	61825	.	+	.	ID=gene-CYJ03_RS02395;Name=csm5;gbkey=Gene;gene=csm5;gene_biotype=protein_coding;locus_tag=CYJ03_RS02395;old_locus_tag=CYJ03_002385
NZ_PJUP02000004.1	Protein Homology	CDS	60815	61825	.	+	0	ID=cds-WP_104052116.1;Parent=gene-CYJ03_RS02395;Dbxref=GenBank:WP_104052116.1;Name=WP_104052116.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm5;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168791.1;locus_tag=CYJ03_RS02395;product=type III-A CRISPR-associated RAMP protein Csm5;protein_id=WP_104052116.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	61844	63118	.	+	.	ID=gene-CYJ03_RS02400;Name=csm6;gbkey=Gene;gene=csm6;gene_biotype=protein_coding;locus_tag=CYJ03_RS02400;old_locus_tag=CYJ03_002390
NZ_PJUP02000004.1	Protein Homology	CDS	61844	63118	.	+	0	ID=cds-WP_104052117.1;Parent=gene-CYJ03_RS02400;Dbxref=GenBank:WP_104052117.1;Name=WP_104052117.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm6;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168792.1;locus_tag=CYJ03_RS02400;product=type III-A CRISPR-associated CARF protein Csm6;protein_id=WP_104052117.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	63118	63894	.	+	.	ID=gene-CYJ03_RS02405;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=CYJ03_RS02405;old_locus_tag=CYJ03_002395
NZ_PJUP02000004.1	Protein Homology	CDS	63118	63894	.	+	0	ID=cds-WP_228064236.1;Parent=gene-CYJ03_RS02405;Dbxref=GenBank:WP_228064236.1;Name=WP_228064236.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168793.1;locus_tag=CYJ03_RS02405;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_228064236.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	64626	65867	.	-	.	ID=gene-CYJ03_RS02410;Name=CYJ03_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02410;old_locus_tag=CYJ03_002400
NZ_PJUP02000004.1	Protein Homology	CDS	64626	65867	.	-	0	ID=cds-WP_099986955.1;Parent=gene-CYJ03_RS02410;Dbxref=GenBank:WP_099986955.1;Name=WP_099986955.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729788.1;locus_tag=CYJ03_RS02410;product=aminoacyltransferase;protein_id=WP_099986955.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	66166	67146	.	+	.	ID=gene-CYJ03_RS02415;Name=CYJ03_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02415;old_locus_tag=CYJ03_002405
NZ_PJUP02000004.1	Protein Homology	CDS	66166	67146	.	+	0	ID=cds-WP_020220073.1;Parent=gene-CYJ03_RS02415;Dbxref=GenBank:WP_020220073.1;Name=WP_020220073.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729787.1;locus_tag=CYJ03_RS02415;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020220073.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	67332	68408	.	+	.	ID=gene-CYJ03_RS02420;Name=CYJ03_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02420;old_locus_tag=CYJ03_002410
NZ_PJUP02000004.1	Protein Homology	CDS	67332	68408	.	+	0	ID=cds-WP_104052119.1;Parent=gene-CYJ03_RS02420;Dbxref=GenBank:WP_104052119.1;Name=WP_104052119.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498776.1;locus_tag=CYJ03_RS02420;product=Gfo/Idh/MocA family protein;protein_id=WP_104052119.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	68430	69470	.	+	.	ID=gene-CYJ03_RS02425;Name=CYJ03_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02425;old_locus_tag=CYJ03_002415
NZ_PJUP02000004.1	Protein Homology	CDS	68430	69470	.	+	0	ID=cds-WP_104052120.1;Parent=gene-CYJ03_RS02425;Dbxref=GenBank:WP_104052120.1;Name=WP_104052120.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729785.1;locus_tag=CYJ03_RS02425;product=Gfo/Idh/MocA family protein;protein_id=WP_104052120.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	69486	70454	.	+	.	ID=gene-CYJ03_RS02430;Name=CYJ03_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02430;old_locus_tag=CYJ03_002420
NZ_PJUP02000004.1	Protein Homology	CDS	69486	70454	.	+	0	ID=cds-WP_063284487.1;Parent=gene-CYJ03_RS02430;Dbxref=GenBank:WP_063284487.1;Name=WP_063284487.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498778.1;locus_tag=CYJ03_RS02430;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_063284487.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	70501	72147	.	+	.	ID=gene-CYJ03_RS02435;Name=CYJ03_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02435;old_locus_tag=CYJ03_002425
NZ_PJUP02000004.1	Protein Homology	CDS	70501	72147	.	+	0	ID=cds-WP_181137774.1;Parent=gene-CYJ03_RS02435;Dbxref=GenBank:WP_181137774.1;Name=WP_181137774.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364983.1;locus_tag=CYJ03_RS02435;product=glycoside hydrolase family 13 protein;protein_id=WP_181137774.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	72343	72663	.	+	.	ID=gene-CYJ03_RS02440;Name=CYJ03_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02440;old_locus_tag=CYJ03_002430
NZ_PJUP02000004.1	Protein Homology	CDS	72343	72663	.	+	0	ID=cds-WP_241900521.1;Parent=gene-CYJ03_RS02440;Dbxref=GenBank:WP_241900521.1;Name=WP_241900521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166788.1;locus_tag=CYJ03_RS02440;product=hypothetical protein;protein_id=WP_241900521.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	72715	73554	.	-	.	ID=gene-CYJ03_RS02445;Name=CYJ03_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02445;old_locus_tag=CYJ03_002435
NZ_PJUP02000004.1	Protein Homology	CDS	72715	73554	.	-	0	ID=cds-WP_014612739.1;Parent=gene-CYJ03_RS02445;Dbxref=GenBank:WP_014612739.1;Name=WP_014612739.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166790.1;locus_tag=CYJ03_RS02445;product=sugar ABC transporter permease;protein_id=WP_014612739.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	73556	74824	.	-	.	ID=gene-CYJ03_RS02450;Name=CYJ03_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02450;old_locus_tag=CYJ03_002440
NZ_PJUP02000004.1	Protein Homology	CDS	73556	74824	.	-	0	ID=cds-WP_101457126.1;Parent=gene-CYJ03_RS02450;Dbxref=GenBank:WP_101457126.1;Name=WP_101457126.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498774.1;locus_tag=CYJ03_RS02450;product=sugar ABC transporter permease;protein_id=WP_101457126.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	74839	76098	.	-	.	ID=gene-CYJ03_RS02455;Name=CYJ03_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02455;old_locus_tag=CYJ03_002445
NZ_PJUP02000004.1	Protein Homology	CDS	74839	76098	.	-	0	ID=cds-WP_101457127.1;Parent=gene-CYJ03_RS02455;Dbxref=GenBank:WP_101457127.1;Name=WP_101457127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729782.1;locus_tag=CYJ03_RS02455;product=extracellular solute-binding protein;protein_id=WP_101457127.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	76111	77208	.	-	.	ID=gene-CYJ03_RS02460;Name=CYJ03_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02460;old_locus_tag=CYJ03_002450
NZ_PJUP02000004.1	Protein Homology	CDS	76111	77208	.	-	0	ID=cds-WP_014612742.1;Parent=gene-CYJ03_RS02460;Dbxref=GenBank:WP_014612742.1;Name=WP_014612742.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498772.1;locus_tag=CYJ03_RS02460;product=ABC transporter ATP-binding protein;protein_id=WP_014612742.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	77641	78813	.	-	.	ID=gene-CYJ03_RS02465;Name=CYJ03_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02465;old_locus_tag=CYJ03_002455
NZ_PJUP02000004.1	Protein Homology	CDS	77641	78813	.	-	0	ID=cds-WP_104052121.1;Parent=gene-CYJ03_RS02465;Dbxref=GenBank:WP_104052121.1;Name=WP_104052121.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612743.1;locus_tag=CYJ03_RS02465;product=cation:proton antiporter;protein_id=WP_104052121.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	78819	79304	.	-	.	ID=gene-CYJ03_RS02470;Name=CYJ03_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02470;old_locus_tag=CYJ03_002460
NZ_PJUP02000004.1	Protein Homology	CDS	78819	79304	.	-	0	ID=cds-WP_014612744.1;Parent=gene-CYJ03_RS02470;Dbxref=GenBank:WP_014612744.1;Name=WP_014612744.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612744.1;locus_tag=CYJ03_RS02470;product=cation:proton antiporter regulatory subunit;protein_id=WP_014612744.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	79450	79893	.	+	.	ID=gene-CYJ03_RS02475;Name=CYJ03_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02475;old_locus_tag=CYJ03_002465
NZ_PJUP02000004.1	Protein Homology	CDS	79450	79893	.	+	0	ID=cds-WP_037542073.1;Parent=gene-CYJ03_RS02475;Dbxref=GenBank:WP_037542073.1;Name=WP_037542073.1;Ontology_term=GO:0005506,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729781.1;locus_tag=CYJ03_RS02475;product=(4Fe-4S)-binding protein;protein_id=WP_037542073.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	79909	80799	.	+	.	ID=gene-CYJ03_RS02480;Name=CYJ03_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02480;old_locus_tag=CYJ03_002470
NZ_PJUP02000004.1	Protein Homology	CDS	79909	80799	.	+	0	ID=cds-WP_014612746.1;Parent=gene-CYJ03_RS02480;Dbxref=GenBank:WP_014612746.1;Name=WP_014612746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612746.1;locus_tag=CYJ03_RS02480;product=VOC family protein;protein_id=WP_014612746.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	81025	82215	.	+	.	ID=gene-CYJ03_RS02485;Name=CYJ03_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02485;old_locus_tag=CYJ03_002475
NZ_PJUP02000004.1	Protein Homology	CDS	81025	82215	.	+	0	ID=cds-WP_101458136.1;Parent=gene-CYJ03_RS02485;Dbxref=GenBank:WP_101458136.1;Name=WP_101458136.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166799.1;locus_tag=CYJ03_RS02485;product=MFS transporter;protein_id=WP_101458136.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	82305	87005	.	-	.	ID=gene-CYJ03_RS02490;Name=spsG;gbkey=Gene;gene=spsG;gene_biotype=protein_coding;locus_tag=CYJ03_RS02490;old_locus_tag=CYJ03_002480
NZ_PJUP02000004.1	Protein Homology	CDS	82305	87005	.	-	0	ID=cds-WP_104052122.1;Parent=gene-CYJ03_RS02490;Dbxref=GenBank:WP_104052122.1;Name=WP_104052122.1;gbkey=CDS;gene=spsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612754.1;locus_tag=CYJ03_RS02490;product=LPXTG-anchored putative endo-alpha-N-acetylgalactosaminidase SpsG;protein_id=WP_104052122.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	87443	88153	.	+	.	ID=gene-CYJ03_RS02495;Name=CYJ03_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02495;old_locus_tag=CYJ03_002485
NZ_PJUP02000004.1	Protein Homology	CDS	87443	88153	.	+	0	ID=cds-WP_014612756.1;Parent=gene-CYJ03_RS02495;Dbxref=GenBank:WP_014612756.1;Name=WP_014612756.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612756.1;locus_tag=CYJ03_RS02495;product=GntR family transcriptional regulator;protein_id=WP_014612756.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	88182	89297	.	+	.	ID=gene-CYJ03_RS02500;Name=CYJ03_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02500;old_locus_tag=CYJ03_002490
NZ_PJUP02000004.1	Protein Homology	CDS	88182	89297	.	+	0	ID=cds-WP_065353941.1;Parent=gene-CYJ03_RS02500;Dbxref=GenBank:WP_065353941.1;Name=WP_065353941.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166802.1;locus_tag=CYJ03_RS02500;product=SIS domain-containing protein;protein_id=WP_065353941.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	89304	90242	.	+	.	ID=gene-CYJ03_RS02505;Name=CYJ03_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02505;old_locus_tag=CYJ03_002495
NZ_PJUP02000004.1	Protein Homology	CDS	89304	90242	.	+	0	ID=cds-WP_104052123.1;Parent=gene-CYJ03_RS02505;Dbxref=GenBank:WP_104052123.1;Name=WP_104052123.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168840.1;locus_tag=CYJ03_RS02505;product=1-phosphofructokinase family hexose kinase;protein_id=WP_104052123.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	90236	91177	.	+	.	ID=gene-CYJ03_RS02510;Name=CYJ03_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02510;old_locus_tag=CYJ03_002500
NZ_PJUP02000004.1	Protein Homology	CDS	90236	91177	.	+	0	ID=cds-WP_096535988.1;Parent=gene-CYJ03_RS02510;Dbxref=GenBank:WP_096535988.1;Name=WP_096535988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612759.1;locus_tag=CYJ03_RS02510;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_096535988.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	91190	92962	.	+	.	ID=gene-CYJ03_RS02515;Name=CYJ03_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02515;old_locus_tag=CYJ03_002505
NZ_PJUP02000004.1	Protein Homology	CDS	91190	92962	.	+	0	ID=cds-WP_104052124.1;Parent=gene-CYJ03_RS02515;Dbxref=GenBank:WP_104052124.1;Name=WP_104052124.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166805.1;locus_tag=CYJ03_RS02515;product=glycoside hydrolase family 35 protein;protein_id=WP_104052124.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	92977	93456	.	+	.	ID=gene-CYJ03_RS02520;Name=CYJ03_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02520;old_locus_tag=CYJ03_002510
NZ_PJUP02000004.1	Protein Homology	CDS	92977	93456	.	+	0	ID=cds-WP_014612761.1;Parent=gene-CYJ03_RS02520;Dbxref=GenBank:WP_014612761.1;Name=WP_014612761.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=CYJ03_RS02520;product=PTS sugar transporter subunit IIB;protein_id=WP_014612761.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	93478	94377	.	+	.	ID=gene-CYJ03_RS02525;Name=CYJ03_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02525;old_locus_tag=CYJ03_002515
NZ_PJUP02000004.1	Protein Homology	CDS	93478	94377	.	+	0	ID=cds-WP_014612762.1;Parent=gene-CYJ03_RS02525;Dbxref=GenBank:WP_014612762.1;Name=WP_014612762.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=CYJ03_RS02525;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_014612762.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	94364	95248	.	+	.	ID=gene-CYJ03_RS02530;Name=CYJ03_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02530;old_locus_tag=CYJ03_002520
NZ_PJUP02000004.1	Protein Homology	CDS	94364	95248	.	+	0	ID=cds-WP_014612763.1;Parent=gene-CYJ03_RS02530;Dbxref=GenBank:WP_014612763.1;Name=WP_014612763.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=CYJ03_RS02530;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014612763.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	95270	95671	.	+	.	ID=gene-CYJ03_RS02535;Name=CYJ03_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02535;old_locus_tag=CYJ03_002525
NZ_PJUP02000004.1	Protein Homology	CDS	95270	95671	.	+	0	ID=cds-WP_020219969.1;Parent=gene-CYJ03_RS02535;Dbxref=GenBank:WP_020219969.1;Name=WP_020219969.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612764.1;locus_tag=CYJ03_RS02535;product=PTS sugar transporter subunit IIA;protein_id=WP_020219969.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	95703	96857	.	+	.	ID=gene-CYJ03_RS02540;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02540;old_locus_tag=CYJ03_002530
NZ_PJUP02000004.1	Protein Homology	CDS	95703	96857	.	+	0	ID=cds-WP_101458131.1;Parent=gene-CYJ03_RS02540;Dbxref=GenBank:WP_101458131.1;Name=WP_101458131.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612765.1;locus_tag=CYJ03_RS02540;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_101458131.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	97044	97559	.	-	.	ID=gene-CYJ03_RS02545;Name=CYJ03_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02545;old_locus_tag=CYJ03_002535
NZ_PJUP02000004.1	Protein Homology	CDS	97044	97559	.	-	0	ID=cds-WP_014612766.1;Parent=gene-CYJ03_RS02545;Dbxref=GenBank:WP_014612766.1;Name=WP_014612766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446907.1;locus_tag=CYJ03_RS02545;product=YceI family protein;protein_id=WP_014612766.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	97958	100018	.	+	.	ID=gene-CYJ03_RS02550;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ03_RS02550;old_locus_tag=CYJ03_002540
NZ_PJUP02000004.1	Protein Homology	CDS	97958	100018	.	+	0	ID=cds-WP_104052131.1;Parent=gene-CYJ03_RS02550;Dbxref=GenBank:WP_104052131.1;Name=WP_104052131.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166817.1;locus_tag=CYJ03_RS02550;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_104052131.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	100459	101391	.	+	.	ID=gene-CYJ03_RS02555;Name=CYJ03_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02555;old_locus_tag=CYJ03_002545
NZ_PJUP02000004.1	Protein Homology	CDS	100459	101391	.	+	0	ID=cds-WP_014612768.1;Parent=gene-CYJ03_RS02555;Dbxref=GenBank:WP_014612768.1;Name=WP_014612768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612768.1;locus_tag=CYJ03_RS02555;product=lactate/malate family dehydrogenase;protein_id=WP_014612768.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	101426	102784	.	+	.	ID=gene-CYJ03_RS02560;Name=CYJ03_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02560;old_locus_tag=CYJ03_002550
NZ_PJUP02000004.1	Protein Homology	CDS	101426	102784	.	+	0	ID=cds-WP_181137773.1;Parent=gene-CYJ03_RS02560;Dbxref=GenBank:WP_181137773.1;Name=WP_181137773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166820.1;locus_tag=CYJ03_RS02560;product=YjiH family protein;protein_id=WP_181137773.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	102815	103582	.	+	.	ID=gene-CYJ03_RS02565;Name=CYJ03_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02565;old_locus_tag=CYJ03_002555
NZ_PJUP02000004.1	Protein Homology	CDS	102815	103582	.	+	0	ID=cds-WP_101458319.1;Parent=gene-CYJ03_RS02565;Dbxref=GenBank:WP_101458319.1;Name=WP_101458319.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612770.1;locus_tag=CYJ03_RS02565;product=IclR family transcriptional regulator;protein_id=WP_101458319.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	103842	104045	.	+	.	ID=gene-CYJ03_RS02570;Name=CYJ03_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02570;old_locus_tag=CYJ03_002560
NZ_PJUP02000004.1	Protein Homology	CDS	103842	104045	.	+	0	ID=cds-WP_014612771.1;Parent=gene-CYJ03_RS02570;Dbxref=GenBank:WP_014612771.1;Name=WP_014612771.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=CYJ03_RS02570;product=helix-turn-helix transcriptional regulator;protein_id=WP_014612771.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	104042	104767	.	+	.	ID=gene-CYJ03_RS02575;Name=CYJ03_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02575;old_locus_tag=CYJ03_002565
NZ_PJUP02000004.1	Protein Homology	CDS	104042	104767	.	+	0	ID=cds-WP_101458320.1;Parent=gene-CYJ03_RS02575;Dbxref=GenBank:WP_101458320.1;Name=WP_101458320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612772.1;locus_tag=CYJ03_RS02575;product=DUF3169 family protein;protein_id=WP_101458320.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	104897	105940	.	-	.	ID=gene-CYJ03_RS02580;Name=CYJ03_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02580;old_locus_tag=CYJ03_002570
NZ_PJUP02000004.1	Protein Homology	CDS	104897	105940	.	-	0	ID=cds-WP_014612773.1;Parent=gene-CYJ03_RS02580;Dbxref=GenBank:WP_014612773.1;Name=WP_014612773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166823.1;locus_tag=CYJ03_RS02580;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014612773.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	106332	107090	.	+	.	ID=gene-CYJ03_RS02585;Name=CYJ03_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02585;old_locus_tag=CYJ03_002575
NZ_PJUP02000004.1	Protein Homology	CDS	106332	107090	.	+	0	ID=cds-WP_101457135.1;Parent=gene-CYJ03_RS02585;Dbxref=GenBank:WP_101457135.1;Name=WP_101457135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729770.1;locus_tag=CYJ03_RS02585;product=spr1630 family ClpXP-sensitive toxin;protein_id=WP_101457135.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	107112	108299	.	+	.	ID=gene-CYJ03_RS02590;Name=CYJ03_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02590;old_locus_tag=CYJ03_002580
NZ_PJUP02000004.1	Protein Homology	CDS	107112	108299	.	+	0	ID=cds-WP_101458407.1;Parent=gene-CYJ03_RS02590;Dbxref=GenBank:WP_101458407.1;Name=WP_101458407.1;Ontology_term=GO:0001217;gbkey=CDS;go_function=DNA-binding transcription repressor activity|0001217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612775.1;locus_tag=CYJ03_RS02590;product=spr1629 family repressor/antitoxin;protein_id=WP_101458407.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	108394	109998	.	-	.	ID=gene-CYJ03_RS02595;Name=CYJ03_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02595;old_locus_tag=CYJ03_002585
NZ_PJUP02000004.1	Protein Homology	CDS	108394	109998	.	-	0	ID=cds-WP_104052126.1;Parent=gene-CYJ03_RS02595;Dbxref=GenBank:WP_104052126.1;Name=WP_104052126.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612776.1;locus_tag=CYJ03_RS02595;product=L-lactate permease;protein_id=WP_104052126.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	110466	111143	.	+	.	ID=gene-CYJ03_RS02600;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CYJ03_RS02600;old_locus_tag=CYJ03_002590
NZ_PJUP02000004.1	Protein Homology	CDS	110466	111143	.	+	0	ID=cds-WP_101458335.1;Parent=gene-CYJ03_RS02600;Dbxref=GenBank:WP_101458335.1;Name=WP_101458335.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=CYJ03_RS02600;product=dethiobiotin synthase;protein_id=WP_101458335.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	111133	112485	.	+	.	ID=gene-CYJ03_RS02605;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02605;old_locus_tag=CYJ03_002595
NZ_PJUP02000004.1	Protein Homology	CDS	111133	112485	.	+	0	ID=cds-WP_101458336.1;Parent=gene-CYJ03_RS02605;Dbxref=GenBank:WP_101458336.1;Name=WP_101458336.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=CYJ03_RS02605;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_101458336.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	112488	113609	.	+	.	ID=gene-CYJ03_RS02610;Name=CYJ03_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02610;old_locus_tag=CYJ03_002600
NZ_PJUP02000004.1	Protein Homology	CDS	112488	113609	.	+	0	ID=cds-WP_104052127.1;Parent=gene-CYJ03_RS02610;Dbxref=GenBank:WP_104052127.1;Name=WP_104052127.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219974.1;locus_tag=CYJ03_RS02610;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_104052127.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	113612	114301	.	+	.	ID=gene-CYJ03_RS02615;Name=CYJ03_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02615;old_locus_tag=CYJ03_002605
NZ_PJUP02000004.1	Protein Homology	CDS	113612	114301	.	+	0	ID=cds-WP_104052128.1;Parent=gene-CYJ03_RS02615;Dbxref=GenBank:WP_104052128.1;Name=WP_104052128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612780.1;locus_tag=CYJ03_RS02615;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_104052128.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	114484	114999	.	-	.	ID=gene-CYJ03_RS02620;Name=CYJ03_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02620;old_locus_tag=CYJ03_002610
NZ_PJUP02000004.1	Protein Homology	CDS	114484	114999	.	-	0	ID=cds-WP_104052129.1;Parent=gene-CYJ03_RS02620;Dbxref=GenBank:WP_104052129.1;Name=WP_104052129.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612788.1;locus_tag=CYJ03_RS02620;product=DoxX family protein;protein_id=WP_104052129.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	115383	116009	.	-	.	ID=gene-CYJ03_RS02625;Name=CYJ03_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02625;old_locus_tag=CYJ03_002615
NZ_PJUP02000004.1	Protein Homology	CDS	115383	116009	.	-	0	ID=cds-WP_101457143.1;Parent=gene-CYJ03_RS02625;Dbxref=GenBank:WP_101457143.1;Name=WP_101457143.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=CYJ03_RS02625;product=FMN-dependent NADH-azoreductase;protein_id=WP_101457143.1;transl_table=11
NZ_PJUP02000004.1	RefSeq	gene	116270	116962	.	+	.	ID=gene-CYJ03_RS02630;Name=CYJ03_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02630;old_locus_tag=CYJ03_002620
NZ_PJUP02000004.1	Protein Homology	CDS	116270	116962	.	+	0	ID=cds-WP_101457144.1;Parent=gene-CYJ03_RS02630;Dbxref=GenBank:WP_101457144.1;Name=WP_101457144.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612790.1;locus_tag=CYJ03_RS02630;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_101457144.1;transl_table=11
##sequence-region NZ_PJUP02000039.1 1 23095
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000039.1	RefSeq	region	1	23095	.	+	.	ID=NZ_PJUP02000039.1:1..23095;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000039.1	RefSeq	gene	290	1357	.	+	.	ID=gene-CYJ03_RS11200;Name=CYJ03_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11200;old_locus_tag=CYJ03_011190
NZ_PJUP02000039.1	Protein Homology	CDS	290	1357	.	+	0	ID=cds-WP_014614606.1;Parent=gene-CYJ03_RS11200;Dbxref=GenBank:WP_014614606.1;Name=WP_014614606.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=CYJ03_RS11200;product=YkvI family membrane protein;protein_id=WP_014614606.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	1400	2425	.	+	.	ID=gene-CYJ03_RS11205;Name=CYJ03_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11205;old_locus_tag=CYJ03_011195
NZ_PJUP02000039.1	Protein Homology	CDS	1400	2425	.	+	0	ID=cds-WP_014614605.1;Parent=gene-CYJ03_RS11205;Dbxref=GenBank:WP_014614605.1;Name=WP_014614605.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=CYJ03_RS11205;product=alpha/beta hydrolase;protein_id=WP_014614605.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	2690	3211	.	-	.	ID=gene-CYJ03_RS11210;Name=CYJ03_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11210;old_locus_tag=CYJ03_011200
NZ_PJUP02000039.1	Protein Homology	CDS	2690	3211	.	-	0	ID=cds-WP_104052372.1;Parent=gene-CYJ03_RS11210;Dbxref=GenBank:WP_104052372.1;Name=WP_104052372.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=CYJ03_RS11210;product=GNAT family N-acetyltransferase;protein_id=WP_104052372.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	3372	4292	.	+	.	ID=gene-CYJ03_RS11215;Name=CYJ03_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11215;old_locus_tag=CYJ03_011205
NZ_PJUP02000039.1	Protein Homology	CDS	3372	4292	.	+	0	ID=cds-WP_014614603.1;Parent=gene-CYJ03_RS11215;Dbxref=GenBank:WP_014614603.1;Name=WP_014614603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614603.1;locus_tag=CYJ03_RS11215;product=NAD(P)H-binding protein;protein_id=WP_014614603.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	4298	4978	.	+	.	ID=gene-CYJ03_RS11220;Name=CYJ03_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11220;old_locus_tag=CYJ03_011210
NZ_PJUP02000039.1	Protein Homology	CDS	4298	4978	.	+	0	ID=cds-WP_014614602.1;Parent=gene-CYJ03_RS11220;Dbxref=GenBank:WP_014614602.1;Name=WP_014614602.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614602.1;locus_tag=CYJ03_RS11220;product=response regulator transcription factor;protein_id=WP_014614602.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	4965	5987	.	+	.	ID=gene-CYJ03_RS11225;Name=CYJ03_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11225;old_locus_tag=CYJ03_011215
NZ_PJUP02000039.1	Protein Homology	CDS	4965	5987	.	+	0	ID=cds-WP_014614601.1;Parent=gene-CYJ03_RS11225;Dbxref=GenBank:WP_014614601.1;Name=WP_014614601.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614601.1;locus_tag=CYJ03_RS11225;product=sensor histidine kinase;protein_id=WP_014614601.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	6093	6854	.	+	.	ID=gene-CYJ03_RS11230;Name=CYJ03_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11230;old_locus_tag=CYJ03_011220
NZ_PJUP02000039.1	Protein Homology	CDS	6093	6854	.	+	0	ID=cds-WP_014614600.1;Parent=gene-CYJ03_RS11230;Dbxref=GenBank:WP_014614600.1;Name=WP_014614600.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166204.1;locus_tag=CYJ03_RS11230;product=ABC transporter ATP-binding protein;protein_id=WP_014614600.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	6844	8742	.	+	.	ID=gene-CYJ03_RS11235;Name=CYJ03_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11235;old_locus_tag=CYJ03_011225
NZ_PJUP02000039.1	Protein Homology	CDS	6844	8742	.	+	0	ID=cds-WP_100006752.1;Parent=gene-CYJ03_RS11235;Dbxref=GenBank:WP_100006752.1;Name=WP_100006752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614599.1;locus_tag=CYJ03_RS11235;product=FtsX-like permease family protein;protein_id=WP_100006752.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	9496	10113	.	+	.	ID=gene-CYJ03_RS11240;Name=CYJ03_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11240;old_locus_tag=CYJ03_011230
NZ_PJUP02000039.1	Protein Homology	CDS	9496	10113	.	+	0	ID=cds-WP_014614598.1;Parent=gene-CYJ03_RS11240;Dbxref=GenBank:WP_014614598.1;Name=WP_014614598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=CYJ03_RS11240;product=DUF47 domain-containing protein;protein_id=WP_014614598.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	10128	11129	.	+	.	ID=gene-CYJ03_RS11245;Name=CYJ03_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11245;old_locus_tag=CYJ03_011235
NZ_PJUP02000039.1	Protein Homology	CDS	10128	11129	.	+	0	ID=cds-WP_014614597.1;Parent=gene-CYJ03_RS11245;Dbxref=GenBank:WP_014614597.1;Name=WP_014614597.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=CYJ03_RS11245;product=inorganic phosphate transporter;protein_id=WP_014614597.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	11390	12217	.	-	.	ID=gene-CYJ03_RS11250;Name=CYJ03_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11250;old_locus_tag=CYJ03_011240
NZ_PJUP02000039.1	Protein Homology	CDS	11390	12217	.	-	0	ID=cds-WP_014614596.1;Parent=gene-CYJ03_RS11250;Dbxref=GenBank:WP_014614596.1;Name=WP_014614596.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166201.1;locus_tag=CYJ03_RS11250;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614596.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	12558	13178	.	+	.	ID=gene-CYJ03_RS11255;Name=CYJ03_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11255;old_locus_tag=CYJ03_011245
NZ_PJUP02000039.1	Protein Homology	CDS	12558	13178	.	+	0	ID=cds-WP_063278884.1;Parent=gene-CYJ03_RS11255;Dbxref=GenBank:WP_063278884.1;Name=WP_063278884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166200.1;locus_tag=CYJ03_RS11255;product=Bax inhibitor-1/YccA family protein;protein_id=WP_063278884.1;transl_table=11
NZ_PJUP02000039.1	cmsearch	riboswitch	13197	13305	.	+	.	ID=id-NZ_PJUP02000039.1:13197..13305;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000039.1	RefSeq	gene	13383	13973	.	+	.	ID=gene-CYJ03_RS11260;Name=CYJ03_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11260;old_locus_tag=CYJ03_011250
NZ_PJUP02000039.1	Protein Homology	CDS	13383	13973	.	+	0	ID=cds-WP_015728709.1;Parent=gene-CYJ03_RS11260;Dbxref=GenBank:WP_015728709.1;Name=WP_015728709.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728709.1;locus_tag=CYJ03_RS11260;product=thiamine phosphate synthase;protein_id=WP_015728709.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	13974	14174	.	+	.	ID=gene-CYJ03_RS11265;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CYJ03_RS11265;old_locus_tag=CYJ03_011255
NZ_PJUP02000039.1	Protein Homology	CDS	13974	14174	.	+	0	ID=cds-WP_014614593.1;Parent=gene-CYJ03_RS11265;Dbxref=GenBank:WP_014614593.1;Name=WP_014614593.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614593.1;locus_tag=CYJ03_RS11265;product=sulfur carrier protein ThiS;protein_id=WP_014614593.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	14178	14945	.	+	.	ID=gene-CYJ03_RS11270;Name=CYJ03_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11270;old_locus_tag=CYJ03_011260
NZ_PJUP02000039.1	Protein Homology	CDS	14178	14945	.	+	0	ID=cds-WP_015728710.1;Parent=gene-CYJ03_RS11270;Dbxref=GenBank:WP_015728710.1;Name=WP_015728710.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=CYJ03_RS11270;product=thiazole synthase;protein_id=WP_015728710.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	14945	15949	.	+	.	ID=gene-CYJ03_RS11275;Name=CYJ03_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11275;old_locus_tag=CYJ03_011265
NZ_PJUP02000039.1	Protein Homology	CDS	14945	15949	.	+	0	ID=cds-WP_014614591.1;Parent=gene-CYJ03_RS11275;Dbxref=GenBank:WP_014614591.1;Name=WP_014614591.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=CYJ03_RS11275;product=ThiF family adenylyltransferase;protein_id=WP_014614591.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	16025	16741	.	+	.	ID=gene-CYJ03_RS11280;Name=CYJ03_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11280;old_locus_tag=CYJ03_011270
NZ_PJUP02000039.1	Protein Homology	CDS	16025	16741	.	+	0	ID=cds-WP_014614590.1;Parent=gene-CYJ03_RS11280;Dbxref=GenBank:WP_014614590.1;Name=WP_014614590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383182.1;locus_tag=CYJ03_RS11280;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_014614590.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	16760	17239	.	+	.	ID=gene-CYJ03_RS11285;Name=CYJ03_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11285;old_locus_tag=CYJ03_011275
NZ_PJUP02000039.1	Protein Homology	CDS	16760	17239	.	+	0	ID=cds-WP_015728712.1;Parent=gene-CYJ03_RS11285;Dbxref=GenBank:WP_015728712.1;Name=WP_015728712.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728712.1;locus_tag=CYJ03_RS11285;product=cupin domain-containing protein;protein_id=WP_015728712.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	17562	18158	.	+	.	ID=gene-CYJ03_RS11290;Name=CYJ03_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11290;old_locus_tag=CYJ03_011280
NZ_PJUP02000039.1	Protein Homology	CDS	17562	18158	.	+	0	ID=cds-WP_014614588.1;Parent=gene-CYJ03_RS11290;Dbxref=GenBank:WP_014614588.1;Name=WP_014614588.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=CYJ03_RS11290;product=ribonuclease FAU-1 family protein;protein_id=WP_014614588.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	18247	19116	.	+	.	ID=gene-CYJ03_RS11295;Name=CYJ03_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11295;old_locus_tag=CYJ03_011285
NZ_PJUP02000039.1	Protein Homology	CDS	18247	19116	.	+	0	ID=cds-WP_014614587.1;Parent=gene-CYJ03_RS11295;Dbxref=GenBank:WP_014614587.1;Name=WP_014614587.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614587.1;locus_tag=CYJ03_RS11295;product=LysR family transcriptional regulator;protein_id=WP_014614587.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	19196	20401	.	+	.	ID=gene-CYJ03_RS11300;Name=CYJ03_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11300;old_locus_tag=CYJ03_011290
NZ_PJUP02000039.1	Protein Homology	CDS	19196	20401	.	+	0	ID=cds-WP_037543811.1;Parent=gene-CYJ03_RS11300;Dbxref=GenBank:WP_037543811.1;Name=WP_037543811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166191.1;locus_tag=CYJ03_RS11300;product=sugar efflux transporter;protein_id=WP_037543811.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	20423	20914	.	+	.	ID=gene-CYJ03_RS11305;Name=CYJ03_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11305;old_locus_tag=CYJ03_011295
NZ_PJUP02000039.1	Protein Homology	CDS	20423	20914	.	+	0	ID=cds-WP_015728715.1;Parent=gene-CYJ03_RS11305;Dbxref=GenBank:WP_015728715.1;Name=WP_015728715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168579.1;locus_tag=CYJ03_RS11305;product=DUF456 domain-containing protein;protein_id=WP_015728715.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	20999	21682	.	-	.	ID=gene-CYJ03_RS11310;Name=CYJ03_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11310;old_locus_tag=CYJ03_011300
NZ_PJUP02000039.1	Protein Homology	CDS	20999	21682	.	-	0	ID=cds-WP_014614584.1;Parent=gene-CYJ03_RS11310;Dbxref=GenBank:WP_014614584.1;Name=WP_014614584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=CYJ03_RS11310;product=DUF1129 family protein;protein_id=WP_014614584.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	21781	22236	.	+	.	ID=gene-CYJ03_RS11315;Name=CYJ03_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11315;old_locus_tag=CYJ03_011305
NZ_PJUP02000039.1	Protein Homology	CDS	21781	22236	.	+	0	ID=cds-WP_014614583.1;Parent=gene-CYJ03_RS11315;Dbxref=GenBank:WP_014614583.1;Name=WP_014614583.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166188.1;locus_tag=CYJ03_RS11315;product=GNAT family N-acetyltransferase;protein_id=WP_014614583.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	pseudogene	22306	22485	.	+	.	ID=gene-CYJ03_RS12900;Name=CYJ03_RS12900;end_range=22485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12900;old_locus_tag=CYJ03_011310;partial=true;pseudo=true
NZ_PJUP02000039.1	Protein Homology	CDS	22306	22485	.	+	0	ID=cds-CYJ03_RS12900;Parent=gene-CYJ03_RS12900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22485,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047408.1;locus_tag=CYJ03_RS12900;partial=true;product=SA0632 family lipoprotein;pseudo=true;transl_table=11
NZ_PJUP02000039.1	RefSeq	pseudogene	22501	22665	.	+	.	ID=gene-CYJ03_RS12700;Name=CYJ03_RS12700;end_range=22665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12700;partial=true;pseudo=true;start_range=.,22501
NZ_PJUP02000039.1	Protein Homology	CDS	22501	22665	.	+	0	ID=cds-CYJ03_RS12700;Parent=gene-CYJ03_RS12700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=22665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485407.1;locus_tag=CYJ03_RS12700;partial=true;product=peptide chain release factor 3;pseudo=true;start_range=.,22501;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	22651	22752	.	-	.	ID=gene-CYJ03_RS12355;Name=CYJ03_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12355
NZ_PJUP02000039.1	Protein Homology	CDS	22651	22752	.	-	0	ID=cds-WP_510186913.1;Parent=gene-CYJ03_RS12355;Dbxref=GenBank:WP_510186913.1;Name=WP_510186913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020132.7;locus_tag=CYJ03_RS12355;product=hypothetical protein;protein_id=WP_510186913.1;transl_table=11
NZ_PJUP02000039.1	RefSeq	gene	22730	23095	.	+	.	ID=gene-CYJ03_RS12905;Name=CYJ03_RS12905;end_range=23095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12905;partial=true
NZ_PJUP02000039.1	Protein Homology	CDS	22730	23095	.	+	0	ID=cds-WP_373408332.1;Parent=gene-CYJ03_RS12905;Dbxref=GenBank:WP_373408332.1;Name=WP_373408332.1;end_range=23095,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019604.7;locus_tag=CYJ03_RS12905;partial=true;product=NAD-binding protein;protein_id=WP_373408332.1;transl_table=11
##sequence-region NZ_PJUP02000038.1 1 24928
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000038.1	RefSeq	region	1	24928	.	+	.	ID=NZ_PJUP02000038.1:1..24928;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000038.1	RefSeq	gene	1	704	.	+	.	ID=gene-CYJ03_RS11100;Name=CYJ03_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11100;old_locus_tag=CYJ03_011090;partial=true;start_range=.,1
NZ_PJUP02000038.1	Protein Homology	CDS	1	704	.	+	2	ID=cds-WP_258058122.1;Parent=gene-CYJ03_RS11100;Dbxref=GenBank:WP_258058122.1;Name=WP_258058122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=CYJ03_RS11100;partial=true;product=toprim domain-containing protein;protein_id=WP_258058122.1;start_range=.,1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	704	3115	.	+	.	ID=gene-CYJ03_RS11105;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11105;old_locus_tag=CYJ03_011095
NZ_PJUP02000038.1	Protein Homology	CDS	704	3115	.	+	0	ID=cds-WP_104052369.1;Parent=gene-CYJ03_RS11105;Dbxref=GenBank:WP_104052369.1;Name=WP_104052369.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=CYJ03_RS11105;product=DNA topoisomerase IV subunit A;protein_id=WP_104052369.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	3218	4681	.	+	.	ID=gene-CYJ03_RS11110;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=CYJ03_RS11110;old_locus_tag=CYJ03_011100
NZ_PJUP02000038.1	Protein Homology	CDS	3218	4681	.	+	0	ID=cds-WP_014613973.1;Parent=gene-CYJ03_RS11110;Dbxref=GenBank:WP_014613973.1;Name=WP_014613973.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166553.1;locus_tag=CYJ03_RS11110;product=glutamine transporter AlsT;protein_id=WP_014613973.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	4877	5728	.	+	.	ID=gene-CYJ03_RS11115;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=CYJ03_RS11115;old_locus_tag=CYJ03_011105
NZ_PJUP02000038.1	Protein Homology	CDS	4877	5728	.	+	0	ID=cds-WP_100006518.1;Parent=gene-CYJ03_RS11115;Dbxref=GenBank:WP_100006518.1;Name=WP_100006518.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=CYJ03_RS11115;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_100006518.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	5839	7878	.	+	.	ID=gene-CYJ03_RS11120;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CYJ03_RS11120;old_locus_tag=CYJ03_011110
NZ_PJUP02000038.1	Protein Homology	CDS	5839	7878	.	+	0	ID=cds-WP_037543085.1;Parent=gene-CYJ03_RS11120;Dbxref=GenBank:WP_037543085.1;Name=WP_037543085.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166551.1;locus_tag=CYJ03_RS11120;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_037543085.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	8151	9353	.	+	.	ID=gene-CYJ03_RS11125;Name=CYJ03_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11125;old_locus_tag=CYJ03_011115
NZ_PJUP02000038.1	Protein Homology	CDS	8151	9353	.	+	0	ID=cds-WP_015729093.1;Parent=gene-CYJ03_RS11125;Dbxref=GenBank:WP_015729093.1;Name=WP_015729093.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729093.1;locus_tag=CYJ03_RS11125;product=AI-2E family transporter;protein_id=WP_015729093.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	9449	11968	.	+	.	ID=gene-CYJ03_RS11130;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=CYJ03_RS11130;old_locus_tag=CYJ03_011120
NZ_PJUP02000038.1	Protein Homology	CDS	9449	11968	.	+	0	ID=cds-WP_014613969.1;Parent=gene-CYJ03_RS11130;Dbxref=GenBank:WP_014613969.1;Name=WP_014613969.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729094.1;locus_tag=CYJ03_RS11130;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_014613969.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	12215	12733	.	-	.	ID=gene-CYJ03_RS11135;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11135;old_locus_tag=CYJ03_011125
NZ_PJUP02000038.1	Protein Homology	CDS	12215	12733	.	-	0	ID=cds-WP_014613968.1;Parent=gene-CYJ03_RS11135;Dbxref=GenBank:WP_014613968.1;Name=WP_014613968.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613968.1;locus_tag=CYJ03_RS11135;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014613968.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	12872	13843	.	+	.	ID=gene-CYJ03_RS11140;Name=CYJ03_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11140;old_locus_tag=CYJ03_011130
NZ_PJUP02000038.1	Protein Homology	CDS	12872	13843	.	+	0	ID=cds-WP_014613967.1;Parent=gene-CYJ03_RS11140;Dbxref=GenBank:WP_014613967.1;Name=WP_014613967.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219592.1;locus_tag=CYJ03_RS11140;product=LCP family protein;protein_id=WP_014613967.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	13899	14084	.	-	.	ID=gene-CYJ03_RS11145;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=CYJ03_RS11145;old_locus_tag=CYJ03_011135
NZ_PJUP02000038.1	Protein Homology	CDS	13899	14084	.	-	0	ID=cds-WP_037543082.1;Parent=gene-CYJ03_RS11145;Dbxref=GenBank:WP_037543082.1;Name=WP_037543082.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CYJ03_RS11145;product=2-hydroxymuconate tautomerase;protein_id=WP_037543082.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	14196	14603	.	+	.	ID=gene-CYJ03_RS11150;Name=CYJ03_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11150;old_locus_tag=CYJ03_011140
NZ_PJUP02000038.1	Protein Homology	CDS	14196	14603	.	+	0	ID=cds-WP_037543077.1;Parent=gene-CYJ03_RS11150;Dbxref=GenBank:WP_037543077.1;Name=WP_037543077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=CYJ03_RS11150;product=sporulation protein;protein_id=WP_037543077.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	14755	16017	.	+	.	ID=gene-CYJ03_RS11155;Name=CYJ03_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11155;old_locus_tag=CYJ03_011145
NZ_PJUP02000038.1	Protein Homology	CDS	14755	16017	.	+	0	ID=cds-WP_014613964.1;Parent=gene-CYJ03_RS11155;Dbxref=GenBank:WP_014613964.1;Name=WP_014613964.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=CYJ03_RS11155;product=Y-family DNA polymerase;protein_id=WP_014613964.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	16097	17188	.	-	.	ID=gene-CYJ03_RS11160;Name=CYJ03_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11160;old_locus_tag=CYJ03_011150
NZ_PJUP02000038.1	Protein Homology	CDS	16097	17188	.	-	0	ID=cds-WP_037543074.1;Parent=gene-CYJ03_RS11160;Dbxref=GenBank:WP_037543074.1;Name=WP_037543074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=CYJ03_RS11160;product=prephenate dehydrogenase;protein_id=WP_037543074.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	17331	18365	.	+	.	ID=gene-CYJ03_RS11165;Name=CYJ03_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11165;old_locus_tag=CYJ03_011155
NZ_PJUP02000038.1	Protein Homology	CDS	17331	18365	.	+	0	ID=cds-WP_020219594.1;Parent=gene-CYJ03_RS11165;Dbxref=GenBank:WP_020219594.1;Name=WP_020219594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219594.1;locus_tag=CYJ03_RS11165;product=M42 family metallopeptidase;protein_id=WP_020219594.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	18540	19805	.	+	.	ID=gene-CYJ03_RS11170;Name=CYJ03_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11170;old_locus_tag=CYJ03_011160
NZ_PJUP02000038.1	Protein Homology	CDS	18540	19805	.	+	0	ID=cds-WP_014613961.1;Parent=gene-CYJ03_RS11170;Dbxref=GenBank:WP_014613961.1;Name=WP_014613961.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613961.1;locus_tag=CYJ03_RS11170;product=aminoacyltransferase;protein_id=WP_014613961.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	19835	21094	.	+	.	ID=gene-CYJ03_RS11175;Name=CYJ03_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11175;old_locus_tag=CYJ03_011165
NZ_PJUP02000038.1	Protein Homology	CDS	19835	21094	.	+	0	ID=cds-WP_014613960.1;Parent=gene-CYJ03_RS11175;Dbxref=GenBank:WP_014613960.1;Name=WP_014613960.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CYJ03_RS11175;product=aminoacyltransferase;protein_id=WP_014613960.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	21685	22008	.	-	.	ID=gene-CYJ03_RS11180;Name=CYJ03_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11180;old_locus_tag=CYJ03_011170
NZ_PJUP02000038.1	Protein Homology	CDS	21685	22008	.	-	0	ID=cds-WP_014613959.1;Parent=gene-CYJ03_RS11180;Dbxref=GenBank:WP_014613959.1;Name=WP_014613959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613959.1;locus_tag=CYJ03_RS11180;product=hypothetical protein;protein_id=WP_014613959.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	gene	22140	23939	.	+	.	ID=gene-CYJ03_RS11185;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ03_RS11185;old_locus_tag=CYJ03_011175
NZ_PJUP02000038.1	Protein Homology	CDS	22140	23939	.	+	0	ID=cds-WP_104052370.1;Parent=gene-CYJ03_RS11185;Dbxref=GenBank:WP_104052370.1;Name=WP_104052370.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613958.1;locus_tag=CYJ03_RS11185;product=oligoendopeptidase F;protein_id=WP_104052370.1;transl_table=11
NZ_PJUP02000038.1	RefSeq	pseudogene	24000	24554	.	-	.	ID=gene-CYJ03_RS11190;Name=CYJ03_RS11190;end_range=24554,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11190;old_locus_tag=CYJ03_011180;partial=true;pseudo=true
NZ_PJUP02000038.1	Protein Homology	CDS	24000	24554	.	-	0	ID=cds-CYJ03_RS11190;Parent=gene-CYJ03_RS11190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009986;end_range=24554,.;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613957.1;locus_tag=CYJ03_RS11190;partial=true;product=LPXTG cell wall anchor domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000038.1	RefSeq	pseudogene	24752	24904	.	+	.	ID=gene-CYJ03_RS12245;Name=yycI;gbkey=Gene;gene=yycI;gene_biotype=pseudogene;locus_tag=CYJ03_RS12245;partial=true;pseudo=true;start_range=.,24752
NZ_PJUP02000038.1	Protein Homology	CDS	24752	24904	.	+	0	ID=cds-CYJ03_RS12245;Parent=gene-CYJ03_RS12245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;gene=yycI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=CYJ03_RS12245;partial=true;product=two-component system regulatory protein YycI;pseudo=true;start_range=.,24752;transl_table=11
##sequence-region NZ_PJUP02000045.1 1 12943
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000045.1	RefSeq	region	1	12943	.	+	.	ID=NZ_PJUP02000045.1:1..12943;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000045.1	RefSeq	gene	392	4063	.	+	.	ID=gene-CYJ03_RS11770;Name=CYJ03_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11770;old_locus_tag=CYJ03_011760
NZ_PJUP02000045.1	Protein Homology	CDS	392	4063	.	+	0	ID=cds-WP_015729599.1;Parent=gene-CYJ03_RS11770;Dbxref=GenBank:WP_015729599.1;Name=WP_015729599.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CYJ03_RS11770;product=nitrate reductase subunit alpha;protein_id=WP_015729599.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	4053	5609	.	+	.	ID=gene-CYJ03_RS11775;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CYJ03_RS11775;old_locus_tag=CYJ03_011765
NZ_PJUP02000045.1	Protein Homology	CDS	4053	5609	.	+	0	ID=cds-WP_014613054.1;Parent=gene-CYJ03_RS11775;Dbxref=GenBank:WP_014613054.1;Name=WP_014613054.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=CYJ03_RS11775;product=nitrate reductase subunit beta;protein_id=WP_014613054.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	5602	6177	.	+	.	ID=gene-CYJ03_RS11780;Name=CYJ03_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11780;old_locus_tag=CYJ03_011770
NZ_PJUP02000045.1	Protein Homology	CDS	5602	6177	.	+	0	ID=cds-WP_014613055.1;Parent=gene-CYJ03_RS11780;Dbxref=GenBank:WP_014613055.1;Name=WP_014613055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=CYJ03_RS11780;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014613055.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	6170	6847	.	+	.	ID=gene-CYJ03_RS11785;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CYJ03_RS11785;old_locus_tag=CYJ03_011775
NZ_PJUP02000045.1	Protein Homology	CDS	6170	6847	.	+	0	ID=cds-WP_014613056.1;Parent=gene-CYJ03_RS11785;Dbxref=GenBank:WP_014613056.1;Name=WP_014613056.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=CYJ03_RS11785;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014613056.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	6863	7324	.	+	.	ID=gene-CYJ03_RS11790;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11790;old_locus_tag=CYJ03_011780
NZ_PJUP02000045.1	Protein Homology	CDS	6863	7324	.	+	0	ID=cds-WP_014613057.1;Parent=gene-CYJ03_RS11790;Dbxref=GenBank:WP_014613057.1;Name=WP_014613057.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613057.1;locus_tag=CYJ03_RS11790;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_014613057.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	7324	8358	.	+	.	ID=gene-CYJ03_RS11795;Name=CYJ03_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11795;old_locus_tag=CYJ03_011785
NZ_PJUP02000045.1	Protein Homology	CDS	7324	8358	.	+	0	ID=cds-WP_014613058.1;Parent=gene-CYJ03_RS11795;Dbxref=GenBank:WP_014613058.1;Name=WP_014613058.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613058.1;locus_tag=CYJ03_RS11795;product=sensor histidine kinase;protein_id=WP_014613058.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	8377	9027	.	+	.	ID=gene-CYJ03_RS11800;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11800;old_locus_tag=CYJ03_011790
NZ_PJUP02000045.1	Protein Homology	CDS	8377	9027	.	+	0	ID=cds-WP_014613059.1;Parent=gene-CYJ03_RS11800;Dbxref=GenBank:WP_014613059.1;Name=WP_014613059.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=CYJ03_RS11800;product=nitrate respiration regulation response regulator NreC;protein_id=WP_014613059.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	pseudogene	10024	10182	.	+	.	ID=gene-CYJ03_RS12915;Name=CYJ03_RS12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12915;old_locus_tag=CYJ03_011795;partial=true;pseudo=true;start_range=.,10024
NZ_PJUP02000045.1	Protein Homology	CDS	10024	10182	.	+	0	ID=cds-CYJ03_RS12915;Parent=gene-CYJ03_RS12915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020567.8;locus_tag=CYJ03_RS12915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10024;transl_table=11
NZ_PJUP02000045.1	RefSeq	gene	10432	11610	.	+	.	ID=gene-CYJ03_RS11810;Name=CYJ03_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11810;old_locus_tag=CYJ03_011800
NZ_PJUP02000045.1	Protein Homology	CDS	10432	11610	.	+	0	ID=cds-WP_014613064.1;Parent=gene-CYJ03_RS11810;Dbxref=GenBank:WP_014613064.1;Name=WP_014613064.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613064.1;locus_tag=CYJ03_RS11810;product=nitrate/nitrite transporter;protein_id=WP_014613064.1;transl_table=11
NZ_PJUP02000045.1	RefSeq	pseudogene	12306	12389	.	-	.	ID=gene-CYJ03_RS12920;Name=CYJ03_RS12920;end_range=12389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12920;partial=true;pseudo=true;start_range=.,12306
NZ_PJUP02000045.1	Protein Homology	CDS	12306	12389	.	-	0	ID=cds-CYJ03_RS12920;Parent=gene-CYJ03_RS12920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=12389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499442.1;locus_tag=CYJ03_RS12920;partial=true;product=hypothetical protein;pseudo=true;start_range=.,12306;transl_table=11
NZ_PJUP02000045.1	RefSeq	pseudogene	12386	12778	.	+	.	ID=gene-CYJ03_RS11815;Name=CYJ03_RS11815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11815;old_locus_tag=CYJ03_011805;partial=true;pseudo=true;start_range=.,12386
NZ_PJUP02000045.1	Protein Homology	CDS	12386	12778	.	+	0	ID=cds-CYJ03_RS11815;Parent=gene-CYJ03_RS11815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044038,GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175116.1;locus_tag=CYJ03_RS11815;partial=true;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;pseudo=true;start_range=.,12386;transl_table=11
##sequence-region NZ_PJUP02000043.1 1 14336
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000043.1	RefSeq	region	1	14336	.	+	.	ID=NZ_PJUP02000043.1:1..14336;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000043.1	RefSeq	pseudogene	1	99	.	-	.	ID=gene-CYJ03_RS11595;Name=CYJ03_RS11595;end_range=99,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11595;old_locus_tag=CYJ03_011585;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000043.1	Protein Homology	CDS	1	99	.	-	0	ID=cds-CYJ03_RS11595;Parent=gene-CYJ03_RS11595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=99,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014676.8;locus_tag=CYJ03_RS11595;partial=true;product=DUF188 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	428	2413	.	-	.	ID=gene-CYJ03_RS11600;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CYJ03_RS11600;old_locus_tag=CYJ03_011590
NZ_PJUP02000043.1	Protein Homology	CDS	428	2413	.	-	0	ID=cds-WP_014613987.1;Parent=gene-CYJ03_RS11600;Dbxref=GenBank:WP_014613987.1;Name=WP_014613987.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613987.1;locus_tag=CYJ03_RS11600;product=transketolase;protein_id=WP_014613987.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	2518	2754	.	-	.	ID=gene-CYJ03_RS11605;Name=CYJ03_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11605;old_locus_tag=CYJ03_011595
NZ_PJUP02000043.1	Protein Homology	CDS	2518	2754	.	-	0	ID=cds-WP_014613988.1;Parent=gene-CYJ03_RS11605;Dbxref=GenBank:WP_014613988.1;Name=WP_014613988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613988.1;locus_tag=CYJ03_RS11605;product=DUF896 domain-containing protein;protein_id=WP_014613988.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	3021	3254	.	-	.	ID=gene-CYJ03_RS11610;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11610;old_locus_tag=CYJ03_011600
NZ_PJUP02000043.1	Protein Homology	CDS	3021	3254	.	-	0	ID=cds-WP_014613989.1;Parent=gene-CYJ03_RS11610;Dbxref=GenBank:WP_014613989.1;Name=WP_014613989.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=CYJ03_RS11610;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_014613989.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	3399	4022	.	+	.	ID=gene-CYJ03_RS11615;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11615;old_locus_tag=CYJ03_011605
NZ_PJUP02000043.1	Protein Homology	CDS	3399	4022	.	+	0	ID=cds-WP_014613990.1;Parent=gene-CYJ03_RS11615;Dbxref=GenBank:WP_014613990.1;Name=WP_014613990.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CYJ03_RS11615;product=transcriptional repressor LexA;protein_id=WP_014613990.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	4235	5251	.	-	.	ID=gene-CYJ03_RS11620;Name=CYJ03_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11620;old_locus_tag=CYJ03_011610
NZ_PJUP02000043.1	Protein Homology	CDS	4235	5251	.	-	0	ID=cds-WP_181137790.1;Parent=gene-CYJ03_RS11620;Dbxref=GenBank:WP_181137790.1;Name=WP_181137790.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275860.1;locus_tag=CYJ03_RS11620;product=CAP domain-containing protein;protein_id=WP_181137790.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	5257	6234	.	-	.	ID=gene-CYJ03_RS11625;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11625;old_locus_tag=CYJ03_011615
NZ_PJUP02000043.1	Protein Homology	CDS	5257	6234	.	-	0	ID=cds-WP_101431600.1;Parent=gene-CYJ03_RS11625;Dbxref=GenBank:WP_101431600.1;Name=WP_101431600.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=CYJ03_RS11625;product=GMP reductase;protein_id=WP_101431600.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	6315	6584	.	-	.	ID=gene-CYJ03_RS11630;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CYJ03_RS11630;old_locus_tag=CYJ03_011620
NZ_PJUP02000043.1	Protein Homology	CDS	6315	6584	.	-	0	ID=cds-WP_014613993.1;Parent=gene-CYJ03_RS11630;Dbxref=GenBank:WP_014613993.1;Name=WP_014613993.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CYJ03_RS11630;product=30S ribosomal protein S14;protein_id=WP_014613993.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	6756	6905	.	+	.	ID=gene-CYJ03_RS11635;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ03_RS11635;old_locus_tag=CYJ03_011625
NZ_PJUP02000043.1	Protein Homology	CDS	6756	6905	.	+	0	ID=cds-WP_014613994.1;Parent=gene-CYJ03_RS11635;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ03_RS11635;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	7259	8710	.	+	.	ID=gene-CYJ03_RS11640;Name=CYJ03_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11640;old_locus_tag=CYJ03_011630
NZ_PJUP02000043.1	Protein Homology	CDS	7259	8710	.	+	0	ID=cds-WP_014613995.1;Parent=gene-CYJ03_RS11640;Dbxref=GenBank:WP_014613995.1;Name=WP_014613995.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167754.1;locus_tag=CYJ03_RS11640;product=amino acid permease;protein_id=WP_014613995.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	8884	9198	.	+	.	ID=gene-CYJ03_RS11645;Name=CYJ03_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11645;old_locus_tag=CYJ03_011635
NZ_PJUP02000043.1	Protein Homology	CDS	8884	9198	.	+	0	ID=cds-WP_014613996.1;Parent=gene-CYJ03_RS11645;Dbxref=GenBank:WP_014613996.1;Name=WP_014613996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=CYJ03_RS11645;product=hypothetical protein;protein_id=WP_014613996.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	9352	10155	.	-	.	ID=gene-CYJ03_RS11650;Name=CYJ03_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11650;old_locus_tag=CYJ03_011640
NZ_PJUP02000043.1	Protein Homology	CDS	9352	10155	.	-	0	ID=cds-WP_014613997.1;Parent=gene-CYJ03_RS11650;Dbxref=GenBank:WP_014613997.1;Name=WP_014613997.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=CYJ03_RS11650;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014613997.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	10342	11259	.	-	.	ID=gene-CYJ03_RS11655;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CYJ03_RS11655;old_locus_tag=CYJ03_011645
NZ_PJUP02000043.1	Protein Homology	CDS	10342	11259	.	-	0	ID=cds-WP_181137791.1;Parent=gene-CYJ03_RS11655;Dbxref=GenBank:WP_181137791.1;Name=WP_181137791.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511052.1;locus_tag=CYJ03_RS11655;product=homoserine kinase;protein_id=WP_181137791.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	11259	12323	.	-	.	ID=gene-CYJ03_RS11660;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11660;old_locus_tag=CYJ03_011650
NZ_PJUP02000043.1	Protein Homology	CDS	11259	12323	.	-	0	ID=cds-WP_014613999.1;Parent=gene-CYJ03_RS11660;Dbxref=GenBank:WP_014613999.1;Name=WP_014613999.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=CYJ03_RS11660;product=threonine synthase;protein_id=WP_014613999.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	gene	12329	13612	.	-	.	ID=gene-CYJ03_RS11665;Name=CYJ03_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11665;old_locus_tag=CYJ03_011655
NZ_PJUP02000043.1	Protein Homology	CDS	12329	13612	.	-	0	ID=cds-WP_014614000.1;Parent=gene-CYJ03_RS11665;Dbxref=GenBank:WP_014614000.1;Name=WP_014614000.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457511.1;locus_tag=CYJ03_RS11665;product=homoserine dehydrogenase;protein_id=WP_014614000.1;transl_table=11
NZ_PJUP02000043.1	RefSeq	pseudogene	13804	14187	.	+	.	ID=gene-CYJ03_RS11670;Name=CYJ03_RS11670;end_range=14187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11670;old_locus_tag=CYJ03_011660;partial=true;pseudo=true
NZ_PJUP02000043.1	Protein Homology	CDS	13804	14187	.	+	0	ID=cds-CYJ03_RS11670;Parent=gene-CYJ03_RS11670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729078.1;locus_tag=CYJ03_RS11670;partial=true;product=amino acid kinase family protein;pseudo=true;transl_table=11
NZ_PJUP02000043.1	RefSeq	pseudogene	14174	14336	.	-	.	ID=gene-CYJ03_RS11675;Name=CYJ03_RS11675;end_range=14336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11675;old_locus_tag=CYJ03_011665;partial=true;pseudo=true;start_range=.,14174
NZ_PJUP02000043.1	Protein Homology	CDS	14174	14336	.	-	1	ID=cds-CYJ03_RS11675;Parent=gene-CYJ03_RS11675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=14336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167388.1;locus_tag=CYJ03_RS11675;partial=true;product=NFACT family protein;pseudo=true;start_range=.,14174;transl_table=11
##sequence-region NZ_PJUP02000042.1 1 14928
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000042.1	RefSeq	region	1	14928	.	+	.	ID=NZ_PJUP02000042.1:1..14928;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000042.1	RefSeq	pseudogene	1	313	.	+	.	ID=gene-CYJ03_RS11535;Name=CYJ03_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11535;old_locus_tag=CYJ03_011525;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000042.1	Protein Homology	CDS	1	313	.	+	1	ID=cds-CYJ03_RS11535;Parent=gene-CYJ03_RS11535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS11535;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	481	708	.	+	.	ID=gene-CYJ03_RS11540;Name=CYJ03_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11540;old_locus_tag=CYJ03_011530
NZ_PJUP02000042.1	Protein Homology	CDS	481	708	.	+	0	ID=cds-WP_014613986.1;Parent=gene-CYJ03_RS11540;Dbxref=GenBank:WP_014613986.1;Name=WP_014613986.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=CYJ03_RS11540;product=YneF family protein;protein_id=WP_014613986.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	956	1423	.	+	.	ID=gene-CYJ03_RS11545;Name=CYJ03_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11545;old_locus_tag=CYJ03_011535
NZ_PJUP02000042.1	Protein Homology	CDS	956	1423	.	+	0	ID=cds-WP_014613985.1;Parent=gene-CYJ03_RS11545;Dbxref=GenBank:WP_014613985.1;Name=WP_014613985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613985.1;locus_tag=CYJ03_RS11545;product=CcdC family protein;protein_id=WP_014613985.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	1549	2703	.	+	.	ID=gene-CYJ03_RS11550;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CYJ03_RS11550;old_locus_tag=CYJ03_011540
NZ_PJUP02000042.1	Protein Homology	CDS	1549	2703	.	+	0	ID=cds-WP_101431602.1;Parent=gene-CYJ03_RS11550;Dbxref=GenBank:WP_101431602.1;Name=WP_101431602.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=CYJ03_RS11550;product=exonuclease subunit SbcD;protein_id=WP_101431602.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	2706	5738	.	+	.	ID=gene-CYJ03_RS11555;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11555;old_locus_tag=CYJ03_011545
NZ_PJUP02000042.1	Protein Homology	CDS	2706	5738	.	+	0	ID=cds-WP_101457437.1;Parent=gene-CYJ03_RS11555;Dbxref=GenBank:WP_101457437.1;Name=WP_101457437.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613982.1;locus_tag=CYJ03_RS11555;product=exonuclease subunit SbcC;protein_id=WP_101457437.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	5967	6326	.	-	.	ID=gene-CYJ03_RS11560;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CYJ03_RS11560;old_locus_tag=CYJ03_011550
NZ_PJUP02000042.1	Protein Homology	CDS	5967	6326	.	-	0	ID=cds-WP_014613981.1;Parent=gene-CYJ03_RS11560;Dbxref=GenBank:WP_014613981.1;Name=WP_014613981.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166560.1;locus_tag=CYJ03_RS11560;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_014613981.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	6566	8200	.	+	.	ID=gene-CYJ03_RS11565;Name=CYJ03_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11565;old_locus_tag=CYJ03_011555
NZ_PJUP02000042.1	Protein Homology	CDS	6566	8200	.	+	0	ID=cds-WP_014613980.1;Parent=gene-CYJ03_RS11565;Dbxref=GenBank:WP_014613980.1;Name=WP_014613980.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=CYJ03_RS11565;product=BCCT family transporter;protein_id=WP_014613980.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	8499	11204	.	+	.	ID=gene-CYJ03_RS11570;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11570;old_locus_tag=CYJ03_011560
NZ_PJUP02000042.1	Protein Homology	CDS	8499	11204	.	+	0	ID=cds-WP_014613979.1;Parent=gene-CYJ03_RS11570;Dbxref=GenBank:WP_014613979.1;Name=WP_014613979.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=CYJ03_RS11570;product=aconitate hydratase AcnA;protein_id=WP_014613979.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	11569	12033	.	+	.	ID=gene-CYJ03_RS11575;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CYJ03_RS11575;old_locus_tag=CYJ03_011565
NZ_PJUP02000042.1	Protein Homology	CDS	11569	12033	.	+	0	ID=cds-WP_014613978.1;Parent=gene-CYJ03_RS11575;Dbxref=GenBank:WP_014613978.1;Name=WP_014613978.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613978.1;locus_tag=CYJ03_RS11575;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_014613978.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	12162	12467	.	-	.	ID=gene-CYJ03_RS11580;Name=CYJ03_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11580;old_locus_tag=CYJ03_011570
NZ_PJUP02000042.1	Protein Homology	CDS	12162	12467	.	-	0	ID=cds-WP_015729090.1;Parent=gene-CYJ03_RS11580;Dbxref=GenBank:WP_015729090.1;Name=WP_015729090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613977.1;locus_tag=CYJ03_RS11580;product=HesB/YadR/YfhF family protein;protein_id=WP_015729090.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	12550	13131	.	-	.	ID=gene-CYJ03_RS11585;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CYJ03_RS11585;old_locus_tag=CYJ03_011575
NZ_PJUP02000042.1	Protein Homology	CDS	12550	13131	.	-	0	ID=cds-WP_014613976.1;Parent=gene-CYJ03_RS11585;Dbxref=GenBank:WP_014613976.1;Name=WP_014613976.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167738.1;locus_tag=CYJ03_RS11585;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_014613976.1;transl_table=11
NZ_PJUP02000042.1	RefSeq	gene	13422	14928	.	+	.	ID=gene-CYJ03_RS11590;Name=CYJ03_RS11590;end_range=14928,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11590;old_locus_tag=CYJ03_011580;partial=true
NZ_PJUP02000042.1	Protein Homology	CDS	13422	14928	.	+	0	ID=cds-WP_258058123.1;Parent=gene-CYJ03_RS11590;Dbxref=GenBank:WP_258058123.1;Name=WP_258058123.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;end_range=14928,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=CYJ03_RS11590;partial=true;product=DNA gyrase/topoisomerase IV subunit B;protein_id=WP_258058123.1;transl_table=11
##sequence-region NZ_PJUP02000046.1 1 11139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000046.1	RefSeq	region	1	11139	.	+	.	ID=NZ_PJUP02000046.1:1..11139;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000046.1	RefSeq	gene	145	345	.	+	.	ID=gene-CYJ03_RS11820;Name=CYJ03_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11820;old_locus_tag=CYJ03_011810
NZ_PJUP02000046.1	Protein Homology	CDS	145	345	.	+	0	ID=cds-WP_258058126.1;Parent=gene-CYJ03_RS11820;Dbxref=GenBank:WP_258058126.1;Name=WP_258058126.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=CYJ03_RS11820;product=TrmH family RNA methyltransferase;protein_id=WP_258058126.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	583	978	.	-	.	ID=gene-CYJ03_RS11825;Name=CYJ03_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11825;old_locus_tag=CYJ03_011815
NZ_PJUP02000046.1	Protein Homology	CDS	583	978	.	-	0	ID=cds-WP_014612980.1;Parent=gene-CYJ03_RS11825;Dbxref=GenBank:WP_014612980.1;Name=WP_014612980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=CYJ03_RS11825;product=hypothetical protein;protein_id=WP_014612980.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	1050	2207	.	-	.	ID=gene-CYJ03_RS11830;Name=CYJ03_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11830;old_locus_tag=CYJ03_011820
NZ_PJUP02000046.1	Protein Homology	CDS	1050	2207	.	-	0	ID=cds-WP_014612979.1;Parent=gene-CYJ03_RS11830;Dbxref=GenBank:WP_014612979.1;Name=WP_014612979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165895.1;locus_tag=CYJ03_RS11830;product=FAD/NAD(P)-binding protein;protein_id=WP_014612979.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	2434	3315	.	-	.	ID=gene-CYJ03_RS11835;Name=CYJ03_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11835;old_locus_tag=CYJ03_011825
NZ_PJUP02000046.1	Protein Homology	CDS	2434	3315	.	-	0	ID=cds-WP_104052375.1;Parent=gene-CYJ03_RS11835;Dbxref=GenBank:WP_104052375.1;Name=WP_104052375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014600603.1;locus_tag=CYJ03_RS11835;product=SDR family oxidoreductase;protein_id=WP_104052375.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	3707	5224	.	+	.	ID=gene-CYJ03_RS11840;Name=CYJ03_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11840;old_locus_tag=CYJ03_011830
NZ_PJUP02000046.1	Protein Homology	CDS	3707	5224	.	+	0	ID=cds-WP_101458223.1;Parent=gene-CYJ03_RS11840;Dbxref=GenBank:WP_101458223.1;Name=WP_101458223.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=CYJ03_RS11840;product=M4 family metallopeptidase;protein_id=WP_101458223.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	5429	6553	.	-	.	ID=gene-CYJ03_RS11845;Name=CYJ03_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11845;old_locus_tag=CYJ03_011835
NZ_PJUP02000046.1	Protein Homology	CDS	5429	6553	.	-	0	ID=cds-WP_101458224.1;Parent=gene-CYJ03_RS11845;Dbxref=GenBank:WP_101458224.1;Name=WP_101458224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=CYJ03_RS11845;product=hypothetical protein;protein_id=WP_101458224.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	6740	6949	.	+	.	ID=gene-CYJ03_RS11850;Name=CYJ03_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11850;old_locus_tag=CYJ03_011840
NZ_PJUP02000046.1	Protein Homology	CDS	6740	6949	.	+	0	ID=cds-WP_014612975.1;Parent=gene-CYJ03_RS11850;Dbxref=GenBank:WP_014612975.1;Name=WP_014612975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167250.1;locus_tag=CYJ03_RS11850;product=hypothetical protein;protein_id=WP_014612975.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	7030	7905	.	-	.	ID=gene-CYJ03_RS11855;Name=CYJ03_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11855;old_locus_tag=CYJ03_011845
NZ_PJUP02000046.1	Protein Homology	CDS	7030	7905	.	-	0	ID=cds-WP_101458225.1;Parent=gene-CYJ03_RS11855;Dbxref=GenBank:WP_101458225.1;Name=WP_101458225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=CYJ03_RS11855;product=alpha/beta fold hydrolase;protein_id=WP_101458225.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	8009	9427	.	-	.	ID=gene-CYJ03_RS11860;Name=CYJ03_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11860;old_locus_tag=CYJ03_011850
NZ_PJUP02000046.1	Protein Homology	CDS	8009	9427	.	-	0	ID=cds-WP_041614885.1;Parent=gene-CYJ03_RS11860;Dbxref=GenBank:WP_041614885.1;Name=WP_041614885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=CYJ03_RS11860;product=phosphate--AMP phosphotransferase;protein_id=WP_041614885.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	9849	10556	.	+	.	ID=gene-CYJ03_RS11865;Name=CYJ03_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11865;old_locus_tag=CYJ03_011855
NZ_PJUP02000046.1	Protein Homology	CDS	9849	10556	.	+	0	ID=cds-WP_101458227.1;Parent=gene-CYJ03_RS11865;Dbxref=GenBank:WP_101458227.1;Name=WP_101458227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=CYJ03_RS11865;product=transglycosylase SLT domain-containing protein;protein_id=WP_101458227.1;transl_table=11
NZ_PJUP02000046.1	RefSeq	gene	10868	11050	.	+	.	ID=gene-CYJ03_RS11870;Name=CYJ03_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11870;old_locus_tag=CYJ03_011860
NZ_PJUP02000046.1	Protein Homology	CDS	10868	11050	.	+	0	ID=cds-WP_373408333.1;Parent=gene-CYJ03_RS11870;Dbxref=GenBank:WP_373408333.1;Name=WP_373408333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023286.7;locus_tag=CYJ03_RS11870;product=DUF3378 domain-containing protein;protein_id=WP_373408333.1;transl_table=11
##sequence-region NZ_PJUP02000044.1 1 13381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000044.1	RefSeq	region	1	13381	.	+	.	ID=NZ_PJUP02000044.1:1..13381;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000044.1	RefSeq	pseudogene	1	325	.	+	.	ID=gene-CYJ03_RS12910;Name=CYJ03_RS12910;end_range=325,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12910;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000044.1	Protein Homology	CDS	1	325	.	+	1	ID=cds-CYJ03_RS12910;Parent=gene-CYJ03_RS12910;Note=too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009294;end_range=325,.;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480687.1;locus_tag=CYJ03_RS12910;partial=true;product=DNA-processing protein DprA;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000044.1	RefSeq	pseudogene	307	402	.	-	.	ID=gene-CYJ03_RS12710;Name=CYJ03_RS12710;end_range=402,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12710;old_locus_tag=CYJ03_011675;partial=true;pseudo=true;start_range=.,307
NZ_PJUP02000044.1	Protein Homology	CDS	307	402	.	-	0	ID=cds-CYJ03_RS12710;Parent=gene-CYJ03_RS12710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009294;end_range=402,.;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491388.1;locus_tag=CYJ03_RS12710;partial=true;product=DNA-processing protein DprA;pseudo=true;start_range=.,307;transl_table=11
NZ_PJUP02000044.1	RefSeq	pseudogene	404	574	.	+	.	ID=gene-CYJ03_RS11690;Name=CYJ03_RS11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11690;old_locus_tag=CYJ03_011680;partial=true;pseudo=true;start_range=.,404
NZ_PJUP02000044.1	Protein Homology	CDS	404	574	.	+	0	ID=cds-CYJ03_RS11690;Parent=gene-CYJ03_RS11690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS11690;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,404;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	703	1263	.	-	.	ID=gene-CYJ03_RS12715;Name=CYJ03_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12715;old_locus_tag=CYJ03_011685
NZ_PJUP02000044.1	Protein Homology	CDS	703	1263	.	-	0	ID=cds-WP_240790494.1;Parent=gene-CYJ03_RS12715;Dbxref=GenBank:WP_240790494.1;Name=WP_240790494.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=CYJ03_RS12715;product=tyrosine-type recombinase/integrase;protein_id=WP_240790494.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	2055	2234	.	+	.	ID=gene-CYJ03_RS11700;Name=CYJ03_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11700;old_locus_tag=CYJ03_011690
NZ_PJUP02000044.1	Protein Homology	CDS	2055	2234	.	+	0	ID=cds-WP_014614017.1;Parent=gene-CYJ03_RS11700;Dbxref=GenBank:WP_014614017.1;Name=WP_014614017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614017.1;locus_tag=CYJ03_RS11700;product=DUF1381 domain-containing protein;protein_id=WP_014614017.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	2218	2526	.	-	.	ID=gene-CYJ03_RS11705;Name=CYJ03_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11705;old_locus_tag=CYJ03_011695
NZ_PJUP02000044.1	Protein Homology	CDS	2218	2526	.	-	0	ID=cds-WP_037543121.1;Parent=gene-CYJ03_RS11705;Dbxref=GenBank:WP_037543121.1;Name=WP_037543121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500109.1;locus_tag=CYJ03_RS11705;product=DUF4870 domain-containing protein;protein_id=WP_037543121.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	3384	4130	.	+	.	ID=gene-CYJ03_RS11710;Name=CYJ03_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11710;old_locus_tag=CYJ03_011700
NZ_PJUP02000044.1	Protein Homology	CDS	3384	4130	.	+	0	ID=cds-WP_070407765.1;Parent=gene-CYJ03_RS11710;Dbxref=GenBank:WP_070407765.1;Name=WP_070407765.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614014.1;locus_tag=CYJ03_RS11710;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_070407765.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	4161	5453	.	+	.	ID=gene-CYJ03_RS11715;Name=CYJ03_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11715;old_locus_tag=CYJ03_011705
NZ_PJUP02000044.1	Protein Homology	CDS	4161	5453	.	+	0	ID=cds-WP_101431596.1;Parent=gene-CYJ03_RS11715;Dbxref=GenBank:WP_101431596.1;Name=WP_101431596.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614013.1;locus_tag=CYJ03_RS11715;product=MFS transporter;protein_id=WP_101431596.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	5614	5856	.	+	.	ID=gene-CYJ03_RS11720;Name=CYJ03_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11720;old_locus_tag=CYJ03_011710
NZ_PJUP02000044.1	Protein Homology	CDS	5614	5856	.	+	0	ID=cds-WP_096547830.1;Parent=gene-CYJ03_RS11720;Dbxref=GenBank:WP_096547830.1;Name=WP_096547830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729073.1;locus_tag=CYJ03_RS11720;product=hypothetical protein;protein_id=WP_096547830.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	5935	6675	.	+	.	ID=gene-CYJ03_RS11725;Name=CYJ03_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11725;old_locus_tag=CYJ03_011715
NZ_PJUP02000044.1	Protein Homology	CDS	5935	6675	.	+	0	ID=cds-WP_014614011.1;Parent=gene-CYJ03_RS11725;Dbxref=GenBank:WP_014614011.1;Name=WP_014614011.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729074.1;locus_tag=CYJ03_RS11725;product=HAD family hydrolase;protein_id=WP_014614011.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	6967	7608	.	-	.	ID=gene-CYJ03_RS11730;Name=CYJ03_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11730;old_locus_tag=CYJ03_011720
NZ_PJUP02000044.1	Protein Homology	CDS	6967	7608	.	-	0	ID=cds-WP_101457581.1;Parent=gene-CYJ03_RS11730;Dbxref=GenBank:WP_101457581.1;Name=WP_101457581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614009.1;locus_tag=CYJ03_RS11730;product=thermonuclease family protein;protein_id=WP_101457581.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	8266	8463	.	-	.	ID=gene-CYJ03_RS11735;Name=CYJ03_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11735;old_locus_tag=CYJ03_011725
NZ_PJUP02000044.1	Protein Homology	CDS	8266	8463	.	-	0	ID=cds-WP_014614007.1;Parent=gene-CYJ03_RS11735;Dbxref=GenBank:WP_014614007.1;Name=WP_014614007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=CYJ03_RS11735;product=hypothetical protein;protein_id=WP_014614007.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	8603	9109	.	+	.	ID=gene-CYJ03_RS11740;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=CYJ03_RS11740;old_locus_tag=CYJ03_011730
NZ_PJUP02000044.1	Protein Homology	CDS	8603	9109	.	+	0	ID=cds-WP_037543104.1;Parent=gene-CYJ03_RS11740;Dbxref=GenBank:WP_037543104.1;Name=WP_037543104.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=CYJ03_RS11740;product=thermonuclease NucI;protein_id=WP_037543104.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	9173	10042	.	-	.	ID=gene-CYJ03_RS11745;Name=CYJ03_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11745;old_locus_tag=CYJ03_011735
NZ_PJUP02000044.1	Protein Homology	CDS	9173	10042	.	-	0	ID=cds-WP_101457434.1;Parent=gene-CYJ03_RS11745;Dbxref=GenBank:WP_101457434.1;Name=WP_101457434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614005.1;locus_tag=CYJ03_RS11745;product=hypothetical protein;protein_id=WP_101457434.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	10471	10833	.	-	.	ID=gene-CYJ03_RS11750;Name=CYJ03_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11750;old_locus_tag=CYJ03_011740
NZ_PJUP02000044.1	Protein Homology	CDS	10471	10833	.	-	0	ID=cds-WP_014614004.1;Parent=gene-CYJ03_RS11750;Dbxref=GenBank:WP_014614004.1;Name=WP_014614004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167762.1;locus_tag=CYJ03_RS11750;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014614004.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	11349	11936	.	+	.	ID=gene-CYJ03_RS11755;Name=CYJ03_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11755;old_locus_tag=CYJ03_011745
NZ_PJUP02000044.1	Protein Homology	CDS	11349	11936	.	+	0	ID=cds-WP_015729077.1;Parent=gene-CYJ03_RS11755;Dbxref=GenBank:WP_015729077.1;Name=WP_015729077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165399.1;locus_tag=CYJ03_RS11755;product=hypothetical protein;protein_id=WP_015729077.1;transl_table=11
NZ_PJUP02000044.1	RefSeq	pseudogene	11980	13224	.	-	.	ID=gene-CYJ03_RS11760;Name=CYJ03_RS11760;end_range=13224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11760;old_locus_tag=CYJ03_011750;partial=true;pseudo=true
NZ_PJUP02000044.1	Protein Homology	CDS	11980	13224	.	-	0	ID=cds-CYJ03_RS11760;Parent=gene-CYJ03_RS11760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009085,GO:0004072;end_range=13224,.;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729078.1;locus_tag=CYJ03_RS11760;partial=true;product=aspartate kinase;pseudo=true;transl_table=11
NZ_PJUP02000044.1	RefSeq	gene	13245	13373	.	+	.	ID=gene-CYJ03_RS11765;Name=CYJ03_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11765;old_locus_tag=CYJ03_011755
NZ_PJUP02000044.1	Protein Homology	CDS	13245	13373	.	+	0	ID=cds-WP_258058125.1;Parent=gene-CYJ03_RS11765;Dbxref=GenBank:WP_258058125.1;Name=WP_258058125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.7;locus_tag=CYJ03_RS11765;product=DUF1648 domain-containing protein;protein_id=WP_258058125.1;transl_table=11
##sequence-region NZ_PJUP02000047.1 1 9610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000047.1	RefSeq	region	1	9610	.	+	.	ID=NZ_PJUP02000047.1:1..9610;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000047.1	RefSeq	pseudogene	1	242	.	+	.	ID=gene-CYJ03_RS11875;Name=CYJ03_RS11875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11875;old_locus_tag=CYJ03_011865;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000047.1	GeneMarkS-2+	CDS	1	242	.	+	2	ID=cds-CYJ03_RS11875;Parent=gene-CYJ03_RS11875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS11875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000047.1	RefSeq	pseudogene	194	337	.	+	.	ID=gene-CYJ03_RS12925;Name=CYJ03_RS12925;end_range=337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12925;old_locus_tag=CYJ03_011870;partial=true;pseudo=true;start_range=.,194
NZ_PJUP02000047.1	Protein Homology	CDS	194	337	.	+	0	ID=cds-CYJ03_RS12925;Parent=gene-CYJ03_RS12925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166278.1;locus_tag=CYJ03_RS12925;partial=true;product=serine protease;pseudo=true;start_range=.,194;transl_table=11
NZ_PJUP02000047.1	RefSeq	sequence_feature	438	688	.	+	.	ID=id-NZ_PJUP02000047.1:438..688;Note=23S ribosomal RNA rRNA prediction is too short;gbkey=misc_feature
NZ_PJUP02000047.1	RefSeq	gene	778	892	.	+	.	ID=gene-CYJ03_RS11890;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CYJ03_RS11890;old_locus_tag=CYJ03_011880
NZ_PJUP02000047.1	cmsearch	rRNA	778	892	.	+	.	ID=rna-CYJ03_RS11890;Parent=gene-CYJ03_RS11890;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS11890;product=5S ribosomal RNA
NZ_PJUP02000047.1	cmsearch	exon	778	892	.	+	.	ID=exon-CYJ03_RS11890-1;Parent=rna-CYJ03_RS11890;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS11890;product=5S ribosomal RNA
NZ_PJUP02000047.1	RefSeq	gene	902	976	.	+	.	ID=gene-CYJ03_RS11895;Name=CYJ03_RS11895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11895;old_locus_tag=CYJ03_011885
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	902	976	.	+	.	ID=rna-CYJ03_RS11895;Parent=gene-CYJ03_RS11895;anticodon=(pos:934..936);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11895;product=tRNA-Asn
NZ_PJUP02000047.1	tRNAscan-SE	exon	902	976	.	+	.	ID=exon-CYJ03_RS11895-1;Parent=rna-CYJ03_RS11895;anticodon=(pos:934..936);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11895;product=tRNA-Asn
NZ_PJUP02000047.1	RefSeq	gene	978	1049	.	+	.	ID=gene-CYJ03_RS11900;Name=CYJ03_RS11900;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11900;old_locus_tag=CYJ03_011890
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	978	1049	.	+	.	ID=rna-CYJ03_RS11900;Parent=gene-CYJ03_RS11900;anticodon=(pos:1011..1013);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11900;product=tRNA-Glu
NZ_PJUP02000047.1	tRNAscan-SE	exon	978	1049	.	+	.	ID=exon-CYJ03_RS11900-1;Parent=rna-CYJ03_RS11900;anticodon=(pos:1011..1013);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11900;product=tRNA-Glu
NZ_PJUP02000047.1	RefSeq	gene	1059	1134	.	+	.	ID=gene-CYJ03_RS11905;Name=CYJ03_RS11905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11905;old_locus_tag=CYJ03_011895
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	1059	1134	.	+	.	ID=rna-CYJ03_RS11905;Parent=gene-CYJ03_RS11905;anticodon=(pos:1092..1094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11905;product=tRNA-Val
NZ_PJUP02000047.1	tRNAscan-SE	exon	1059	1134	.	+	.	ID=exon-CYJ03_RS11905-1;Parent=rna-CYJ03_RS11905;anticodon=(pos:1092..1094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11905;product=tRNA-Val
NZ_PJUP02000047.1	RefSeq	gene	1155	1238	.	+	.	ID=gene-CYJ03_RS11910;Name=CYJ03_RS11910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11910;old_locus_tag=CYJ03_011900
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	1155	1238	.	+	.	ID=rna-CYJ03_RS11910;Parent=gene-CYJ03_RS11910;anticodon=(pos:1189..1191);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11910;product=tRNA-Tyr
NZ_PJUP02000047.1	tRNAscan-SE	exon	1155	1238	.	+	.	ID=exon-CYJ03_RS11910-1;Parent=rna-CYJ03_RS11910;anticodon=(pos:1189..1191);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11910;product=tRNA-Tyr
NZ_PJUP02000047.1	RefSeq	gene	1243	1317	.	+	.	ID=gene-CYJ03_RS11915;Name=CYJ03_RS11915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11915;old_locus_tag=CYJ03_011905
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	1243	1317	.	+	.	ID=rna-CYJ03_RS11915;Parent=gene-CYJ03_RS11915;anticodon=(pos:1275..1277);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11915;product=tRNA-Gln
NZ_PJUP02000047.1	tRNAscan-SE	exon	1243	1317	.	+	.	ID=exon-CYJ03_RS11915-1;Parent=rna-CYJ03_RS11915;anticodon=(pos:1275..1277);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11915;product=tRNA-Gln
NZ_PJUP02000047.1	RefSeq	gene	1321	1393	.	+	.	ID=gene-CYJ03_RS11920;Name=CYJ03_RS11920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS11920;old_locus_tag=CYJ03_011910
NZ_PJUP02000047.1	tRNAscan-SE	tRNA	1321	1393	.	+	.	ID=rna-CYJ03_RS11920;Parent=gene-CYJ03_RS11920;anticodon=(pos:1354..1356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11920;product=tRNA-Lys
NZ_PJUP02000047.1	tRNAscan-SE	exon	1321	1393	.	+	.	ID=exon-CYJ03_RS11920-1;Parent=rna-CYJ03_RS11920;anticodon=(pos:1354..1356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS11920;product=tRNA-Lys
NZ_PJUP02000047.1	RefSeq	gene	1771	2676	.	+	.	ID=gene-CYJ03_RS11925;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=CYJ03_RS11925;old_locus_tag=CYJ03_011915
NZ_PJUP02000047.1	Protein Homology	CDS	1771	2676	.	+	0	ID=cds-WP_014613286.1;Parent=gene-CYJ03_RS11925;Dbxref=GenBank:WP_014613286.1;Name=WP_014613286.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=CYJ03_RS11925;product=arginase;protein_id=WP_014613286.1;transl_table=11
NZ_PJUP02000047.1	RefSeq	gene	2908	3714	.	+	.	ID=gene-CYJ03_RS11930;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS11930;old_locus_tag=CYJ03_011920
NZ_PJUP02000047.1	Protein Homology	CDS	2908	3714	.	+	0	ID=cds-WP_014613287.1;Parent=gene-CYJ03_RS11930;Dbxref=GenBank:WP_014613287.1;Name=WP_014613287.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168352.1;locus_tag=CYJ03_RS11930;product=diadenylate cyclase CdaA;protein_id=WP_014613287.1;transl_table=11
NZ_PJUP02000047.1	RefSeq	gene	3715	4647	.	+	.	ID=gene-CYJ03_RS11935;Name=CYJ03_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11935;old_locus_tag=CYJ03_011925
NZ_PJUP02000047.1	Protein Homology	CDS	3715	4647	.	+	0	ID=cds-WP_015729470.1;Parent=gene-CYJ03_RS11935;Dbxref=GenBank:WP_015729470.1;Name=WP_015729470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=CYJ03_RS11935;product=CdaR family protein;protein_id=WP_015729470.1;transl_table=11
NZ_PJUP02000047.1	RefSeq	gene	4675	6030	.	+	.	ID=gene-CYJ03_RS11940;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CYJ03_RS11940;old_locus_tag=CYJ03_011930
NZ_PJUP02000047.1	Protein Homology	CDS	4675	6030	.	+	0	ID=cds-WP_014613289.1;Parent=gene-CYJ03_RS11940;Dbxref=GenBank:WP_014613289.1;Name=WP_014613289.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613289.1;locus_tag=CYJ03_RS11940;product=phosphoglucosamine mutase;protein_id=WP_014613289.1;transl_table=11
NZ_PJUP02000047.1	RefSeq	gene	6157	6378	.	-	.	ID=gene-CYJ03_RS11945;Name=CYJ03_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11945;old_locus_tag=CYJ03_011935
NZ_PJUP02000047.1	GeneMarkS-2+	CDS	6157	6378	.	-	0	ID=cds-WP_258058127.1;Parent=gene-CYJ03_RS11945;Dbxref=GenBank:WP_258058127.1;Name=WP_258058127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS11945;product=hypothetical protein;protein_id=WP_258058127.1;transl_table=11
NZ_PJUP02000047.1	RefSeq	gene	7419	9221	.	+	.	ID=gene-CYJ03_RS11950;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CYJ03_RS11950;old_locus_tag=CYJ03_011940
NZ_PJUP02000047.1	Protein Homology	CDS	7419	9221	.	+	0	ID=cds-WP_065520410.1;Parent=gene-CYJ03_RS11950;Dbxref=GenBank:WP_065520410.1;Name=WP_065520410.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CYJ03_RS11950;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_065520410.1;transl_table=11
##sequence-region NZ_PJUP02000049.1 1 8346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000049.1	RefSeq	region	1	8346	.	+	.	ID=NZ_PJUP02000049.1:1..8346;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000049.1	RefSeq	pseudogene	64	300	.	-	.	ID=gene-CYJ03_RS12020;Name=CYJ03_RS12020;end_range=300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12020;old_locus_tag=CYJ03_012010;partial=true;pseudo=true;start_range=.,64
NZ_PJUP02000049.1	Protein Homology	CDS	64	300	.	-	0	ID=cds-CYJ03_RS12020;Parent=gene-CYJ03_RS12020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116229.1;locus_tag=CYJ03_RS12020;partial=true;product=class II fumarate hydratase;pseudo=true;start_range=.,64;transl_table=11
NZ_PJUP02000049.1	RefSeq	gene	297	851	.	-	.	ID=gene-CYJ03_RS12025;Name=CYJ03_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12025;old_locus_tag=CYJ03_012015
NZ_PJUP02000049.1	Protein Homology	CDS	297	851	.	-	0	ID=cds-WP_258058129.1;Parent=gene-CYJ03_RS12025;Dbxref=GenBank:WP_258058129.1;Name=WP_258058129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025857.7;locus_tag=CYJ03_RS12025;product=CAP-associated domain-containing protein;protein_id=WP_258058129.1;transl_table=11
NZ_PJUP02000049.1	RefSeq	gene	1495	1956	.	-	.	ID=gene-CYJ03_RS12030;Name=CYJ03_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12030;old_locus_tag=CYJ03_012020
NZ_PJUP02000049.1	Protein Homology	CDS	1495	1956	.	-	0	ID=cds-WP_014614224.1;Parent=gene-CYJ03_RS12030;Dbxref=GenBank:WP_014614224.1;Name=WP_014614224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=CYJ03_RS12030;product=DUF420 domain-containing protein;protein_id=WP_014614224.1;transl_table=11
NZ_PJUP02000049.1	RefSeq	gene	1984	2895	.	-	.	ID=gene-CYJ03_RS12035;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CYJ03_RS12035;old_locus_tag=CYJ03_012025
NZ_PJUP02000049.1	Protein Homology	CDS	1984	2895	.	-	0	ID=cds-WP_096533598.1;Parent=gene-CYJ03_RS12035;Dbxref=GenBank:WP_096533598.1;Name=WP_096533598.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276112.1;locus_tag=CYJ03_RS12035;product=heme o synthase;protein_id=WP_096533598.1;transl_table=11
NZ_PJUP02000049.1	RefSeq	gene	3107	4021	.	+	.	ID=gene-CYJ03_RS12040;Name=CYJ03_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12040;old_locus_tag=CYJ03_012030
NZ_PJUP02000049.1	Protein Homology	CDS	3107	4021	.	+	0	ID=cds-WP_101431264.1;Parent=gene-CYJ03_RS12040;Dbxref=GenBank:WP_101431264.1;Name=WP_101431264.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728962.1;locus_tag=CYJ03_RS12040;product=COX15/CtaA family protein;protein_id=WP_101431264.1;transl_table=11
NZ_PJUP02000049.1	RefSeq	gene	4159	7608	.	-	.	ID=gene-CYJ03_RS12045;Name=CYJ03_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12045;old_locus_tag=CYJ03_012035
NZ_PJUP02000049.1	Protein Homology	CDS	4159	7608	.	-	0	ID=cds-WP_101431263.1;Parent=gene-CYJ03_RS12045;Dbxref=GenBank:WP_101431263.1;Name=WP_101431263.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614227.1;locus_tag=CYJ03_RS12045;product=pyruvate carboxylase;protein_id=WP_101431263.1;transl_table=11
NZ_PJUP02000049.1	RefSeq	pseudogene	8158	8346	.	-	.	ID=gene-CYJ03_RS12050;Name=CYJ03_RS12050;end_range=8346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12050;old_locus_tag=CYJ03_012040;partial=true;pseudo=true
NZ_PJUP02000049.1	Protein Homology	CDS	8158	8346	.	-	0	ID=cds-CYJ03_RS12050;Parent=gene-CYJ03_RS12050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8346,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12050;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11
##sequence-region NZ_PJUP02000048.1 1 8992
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000048.1	RefSeq	region	1	8992	.	+	.	ID=NZ_PJUP02000048.1:1..8992;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000048.1	RefSeq	pseudogene	167	472	.	+	.	ID=gene-CYJ03_RS11960;Name=CYJ03_RS11960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS11960;old_locus_tag=CYJ03_011950;partial=true;pseudo=true;start_range=.,167
NZ_PJUP02000048.1	Protein Homology	CDS	167	472	.	+	0	ID=cds-CYJ03_RS11960;Parent=gene-CYJ03_RS11960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CYJ03_RS11960;partial=true;product=cytochrome c oxidase subunit 3;pseudo=true;start_range=.,167;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	469	759	.	+	.	ID=gene-CYJ03_RS11965;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CYJ03_RS11965;old_locus_tag=CYJ03_011955
NZ_PJUP02000048.1	Protein Homology	CDS	469	759	.	+	0	ID=cds-WP_014614288.1;Parent=gene-CYJ03_RS11965;Dbxref=GenBank:WP_014614288.1;Name=WP_014614288.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=CYJ03_RS11965;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_014614288.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	940	1845	.	+	.	ID=gene-CYJ03_RS11970;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CYJ03_RS11970;old_locus_tag=CYJ03_011960
NZ_PJUP02000048.1	Protein Homology	CDS	940	1845	.	+	0	ID=cds-WP_015728941.1;Parent=gene-CYJ03_RS11970;Dbxref=GenBank:WP_015728941.1;Name=WP_015728941.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728941.1;locus_tag=CYJ03_RS11970;product=ribonucleoside hydrolase RihC;protein_id=WP_015728941.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	2578	4617	.	-	.	ID=gene-CYJ03_RS11975;Name=CYJ03_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11975;old_locus_tag=CYJ03_011965
NZ_PJUP02000048.1	Protein Homology	CDS	2578	4617	.	-	0	ID=cds-WP_233517354.1;Parent=gene-CYJ03_RS11975;Dbxref=GenBank:WP_233517354.1;Name=WP_233517354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=CYJ03_RS11975;product=HelD family protein;protein_id=WP_233517354.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	4642	5850	.	-	.	ID=gene-CYJ03_RS11980;Name=CYJ03_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11980;old_locus_tag=CYJ03_011970
NZ_PJUP02000048.1	Protein Homology	CDS	4642	5850	.	-	0	ID=cds-WP_101431317.1;Parent=gene-CYJ03_RS11980;Dbxref=GenBank:WP_101431317.1;Name=WP_101431317.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=CYJ03_RS11980;product=MFS transporter;protein_id=WP_101431317.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	5831	6367	.	-	.	ID=gene-CYJ03_RS11985;Name=CYJ03_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11985;old_locus_tag=CYJ03_011975
NZ_PJUP02000048.1	Protein Homology	CDS	5831	6367	.	-	0	ID=cds-WP_233506577.1;Parent=gene-CYJ03_RS11985;Dbxref=GenBank:WP_233506577.1;Name=WP_233506577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219585.1;locus_tag=CYJ03_RS11985;product=hypothetical protein;protein_id=WP_233506577.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	6342	6818	.	-	.	ID=gene-CYJ03_RS11990;Name=CYJ03_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11990;old_locus_tag=CYJ03_011980
NZ_PJUP02000048.1	Protein Homology	CDS	6342	6818	.	-	0	ID=cds-WP_101431318.1;Parent=gene-CYJ03_RS11990;Dbxref=GenBank:WP_101431318.1;Name=WP_101431318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=CYJ03_RS11990;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_101431318.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	6852	7346	.	+	.	ID=gene-CYJ03_RS11995;Name=CYJ03_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS11995;old_locus_tag=CYJ03_011985
NZ_PJUP02000048.1	Protein Homology	CDS	6852	7346	.	+	0	ID=cds-WP_014614293.1;Parent=gene-CYJ03_RS11995;Dbxref=GenBank:WP_014614293.1;Name=WP_014614293.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.7;locus_tag=CYJ03_RS11995;product=GNAT family N-acetyltransferase;protein_id=WP_014614293.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	7330	8154	.	-	.	ID=gene-CYJ03_RS12000;Name=CYJ03_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12000;old_locus_tag=CYJ03_011990
NZ_PJUP02000048.1	Protein Homology	CDS	7330	8154	.	-	0	ID=cds-WP_101431319.1;Parent=gene-CYJ03_RS12000;Dbxref=GenBank:WP_101431319.1;Name=WP_101431319.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.7;locus_tag=CYJ03_RS12000;product=serine/threonine-protein kinase;protein_id=WP_101431319.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	gene	8121	8489	.	-	.	ID=gene-CYJ03_RS12005;Name=CYJ03_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12005;old_locus_tag=CYJ03_011995
NZ_PJUP02000048.1	Protein Homology	CDS	8121	8489	.	-	0	ID=cds-WP_014614295.1;Parent=gene-CYJ03_RS12005;Dbxref=GenBank:WP_014614295.1;Name=WP_014614295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614295.1;locus_tag=CYJ03_RS12005;product=glycine-rich domain-containing protein;protein_id=WP_014614295.1;transl_table=11
NZ_PJUP02000048.1	RefSeq	pseudogene	8633	8833	.	-	.	ID=gene-CYJ03_RS12010;Name=CYJ03_RS12010;end_range=8833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12010;old_locus_tag=CYJ03_012000;partial=true;pseudo=true;start_range=.,8633
NZ_PJUP02000048.1	Protein Homology	CDS	8633	8833	.	-	0	ID=cds-CYJ03_RS12010;Parent=gene-CYJ03_RS12010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008152,GO:0015930;end_range=8833,.;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499018.1;locus_tag=CYJ03_RS12010;partial=true;product=glutamate synthase central domain-containing protein;pseudo=true;start_range=.,8633;transl_table=11
NZ_PJUP02000048.1	RefSeq	pseudogene	8842	8992	.	+	.	ID=gene-CYJ03_RS12015;Name=CYJ03_RS12015;end_range=8992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12015;old_locus_tag=CYJ03_012005;partial=true;pseudo=true;start_range=.,8842
NZ_PJUP02000048.1	Protein Homology	CDS	8842	8992	.	+	0	ID=cds-CYJ03_RS12015;Parent=gene-CYJ03_RS12015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006457,GO:0005737;end_range=8992,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165006.1;locus_tag=CYJ03_RS12015;partial=true;product=Hsp33 family molecular chaperone HslO;pseudo=true;start_range=.,8842;transl_table=11
##sequence-region NZ_PJUP02000006.1 1 113340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000006.1	RefSeq	region	1	113340	.	+	.	ID=NZ_PJUP02000006.1:1..113340;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000006.1	RefSeq	pseudogene	67	382	.	+	.	ID=gene-CYJ03_RS03025;Name=CYJ03_RS03025;end_range=382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03025;old_locus_tag=CYJ03_003015;partial=true;pseudo=true;start_range=.,67
NZ_PJUP02000006.1	Protein Homology	CDS	67	382	.	+	0	ID=cds-CYJ03_RS03025;Parent=gene-CYJ03_RS03025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=382,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501417.1;locus_tag=CYJ03_RS03025;partial=true;product=amino acid permease;pseudo=true;start_range=.,67;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	1389	1904	.	-	.	ID=gene-CYJ03_RS03030;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03030;old_locus_tag=CYJ03_003020
NZ_PJUP02000006.1	Protein Homology	CDS	1389	1904	.	-	0	ID=cds-WP_101457389.1;Parent=gene-CYJ03_RS03030;Dbxref=GenBank:WP_101457389.1;Name=WP_101457389.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=CYJ03_RS03030;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_101457389.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	2209	2484	.	+	.	ID=gene-CYJ03_RS03035;Name=CYJ03_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03035;old_locus_tag=CYJ03_003025
NZ_PJUP02000006.1	Protein Homology	CDS	2209	2484	.	+	0	ID=cds-WP_015728571.1;Parent=gene-CYJ03_RS03035;Dbxref=GenBank:WP_015728571.1;Name=WP_015728571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728571.1;locus_tag=CYJ03_RS03035;product=hypothetical protein;protein_id=WP_015728571.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	2865	3872	.	-	.	ID=gene-CYJ03_RS03040;Name=CYJ03_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03040;old_locus_tag=CYJ03_003030
NZ_PJUP02000006.1	Protein Homology	CDS	2865	3872	.	-	0	ID=cds-WP_014614841.1;Parent=gene-CYJ03_RS03040;Dbxref=GenBank:WP_014614841.1;Name=WP_014614841.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498204.1;locus_tag=CYJ03_RS03040;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014614841.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	4210	4491	.	-	.	ID=gene-CYJ03_RS03045;Name=CYJ03_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03045;old_locus_tag=CYJ03_003035
NZ_PJUP02000006.1	Protein Homology	CDS	4210	4491	.	-	0	ID=cds-WP_240621151.1;Parent=gene-CYJ03_RS03045;Dbxref=GenBank:WP_240621151.1;Name=WP_240621151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166378.1;locus_tag=CYJ03_RS03045;product=hypothetical protein;protein_id=WP_240621151.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	5012	6154	.	-	.	ID=gene-CYJ03_RS03050;Name=CYJ03_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03050;old_locus_tag=CYJ03_003040
NZ_PJUP02000006.1	Protein Homology	CDS	5012	6154	.	-	0	ID=cds-WP_014614844.1;Parent=gene-CYJ03_RS03050;Dbxref=GenBank:WP_014614844.1;Name=WP_014614844.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036666.1;locus_tag=CYJ03_RS03050;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_014614844.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	6147	7052	.	-	.	ID=gene-CYJ03_RS03055;Name=CYJ03_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03055;old_locus_tag=CYJ03_003045
NZ_PJUP02000006.1	Protein Homology	CDS	6147	7052	.	-	0	ID=cds-WP_014614845.1;Parent=gene-CYJ03_RS03055;Dbxref=GenBank:WP_014614845.1;Name=WP_014614845.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=CYJ03_RS03055;product=PLP-dependent cysteine synthase family protein;protein_id=WP_014614845.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	7287	8660	.	+	.	ID=gene-CYJ03_RS03060;Name=CYJ03_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03060;old_locus_tag=CYJ03_003050
NZ_PJUP02000006.1	Protein Homology	CDS	7287	8660	.	+	0	ID=cds-WP_233508919.1;Parent=gene-CYJ03_RS03060;Dbxref=GenBank:WP_233508919.1;Name=WP_233508919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166897.1;locus_tag=CYJ03_RS03060;product=carboxylesterase family protein;protein_id=WP_233508919.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	8810	10138	.	-	.	ID=gene-CYJ03_RS03065;Name=CYJ03_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03065;old_locus_tag=CYJ03_003055
NZ_PJUP02000006.1	Protein Homology	CDS	8810	10138	.	-	0	ID=cds-WP_014614848.1;Parent=gene-CYJ03_RS03065;Dbxref=GenBank:WP_014614848.1;Name=WP_014614848.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169210.1;locus_tag=CYJ03_RS03065;product=sodium-dependent transporter;protein_id=WP_014614848.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	10322	10510	.	+	.	ID=gene-CYJ03_RS03070;Name=CYJ03_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03070;old_locus_tag=CYJ03_003060
NZ_PJUP02000006.1	Protein Homology	CDS	10322	10510	.	+	0	ID=cds-WP_014614849.1;Parent=gene-CYJ03_RS03070;Dbxref=GenBank:WP_014614849.1;Name=WP_014614849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614849.1;locus_tag=CYJ03_RS03070;product=hypothetical protein;protein_id=WP_014614849.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	10703	11392	.	-	.	ID=gene-CYJ03_RS03075;Name=CYJ03_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03075;old_locus_tag=CYJ03_003065
NZ_PJUP02000006.1	Protein Homology	CDS	10703	11392	.	-	0	ID=cds-WP_014614850.1;Parent=gene-CYJ03_RS03075;Dbxref=GenBank:WP_014614850.1;Name=WP_014614850.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166900.1;locus_tag=CYJ03_RS03075;product=response regulator transcription factor;protein_id=WP_014614850.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	11406	14039	.	-	.	ID=gene-CYJ03_RS03080;Name=CYJ03_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03080;old_locus_tag=CYJ03_003070
NZ_PJUP02000006.1	Protein Homology	CDS	11406	14039	.	-	0	ID=cds-WP_370863489.1;Parent=gene-CYJ03_RS03080;Dbxref=GenBank:WP_370863489.1;Name=WP_370863489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001647432.1;locus_tag=CYJ03_RS03080;product=ATP-binding protein;protein_id=WP_370863489.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	14198	14278	.	+	.	ID=gene-CYJ03_RS12780;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CYJ03_RS12780;old_locus_tag=CYJ03_003075
NZ_PJUP02000006.1	Protein Homology	CDS	14198	14278	.	+	0	ID=cds-WP_064485063.1;Parent=gene-CYJ03_RS12780;Dbxref=GenBank:WP_064485063.1;Name=WP_064485063.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=CYJ03_RS12780;product=K(+)-transporting ATPase subunit F;protein_id=WP_064485063.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	14304	15980	.	+	.	ID=gene-CYJ03_RS03090;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03090;old_locus_tag=CYJ03_003080
NZ_PJUP02000006.1	Protein Homology	CDS	14304	15980	.	+	0	ID=cds-WP_015728565.1;Parent=gene-CYJ03_RS03090;Dbxref=GenBank:WP_015728565.1;Name=WP_015728565.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402656.1;locus_tag=CYJ03_RS03090;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_015728565.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	15996	18020	.	+	.	ID=gene-CYJ03_RS03095;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03095;old_locus_tag=CYJ03_003085
NZ_PJUP02000006.1	Protein Homology	CDS	15996	18020	.	+	0	ID=cds-WP_101457390.1;Parent=gene-CYJ03_RS03095;Dbxref=GenBank:WP_101457390.1;Name=WP_101457390.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802702.1;locus_tag=CYJ03_RS03095;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_101457390.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	18031	18591	.	+	.	ID=gene-CYJ03_RS03100;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03100;old_locus_tag=CYJ03_003090
NZ_PJUP02000006.1	Protein Homology	CDS	18031	18591	.	+	0	ID=cds-WP_101457391.1;Parent=gene-CYJ03_RS03100;Dbxref=GenBank:WP_101457391.1;Name=WP_101457391.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728563.1;locus_tag=CYJ03_RS03100;product=K(+)-transporting ATPase subunit C;protein_id=WP_101457391.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	18708	19214	.	-	.	ID=gene-CYJ03_RS03105;Name=CYJ03_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03105;old_locus_tag=CYJ03_003095
NZ_PJUP02000006.1	Protein Homology	CDS	18708	19214	.	-	0	ID=cds-WP_373408312.1;Parent=gene-CYJ03_RS03105;Dbxref=GenBank:WP_373408312.1;Name=WP_373408312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014573.7;locus_tag=CYJ03_RS03105;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_373408312.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	19614	20441	.	-	.	ID=gene-CYJ03_RS03110;Name=CYJ03_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03110;old_locus_tag=CYJ03_003100
NZ_PJUP02000006.1	Protein Homology	CDS	19614	20441	.	-	0	ID=cds-WP_370863475.1;Parent=gene-CYJ03_RS03110;Dbxref=GenBank:WP_370863475.1;Name=WP_370863475.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=CYJ03_RS03110;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_370863475.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	20431	23055	.	-	.	ID=gene-CYJ03_RS03115;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=CYJ03_RS03115;old_locus_tag=CYJ03_003105
NZ_PJUP02000006.1	Protein Homology	CDS	20431	23055	.	-	0	ID=cds-WP_101457392.1;Parent=gene-CYJ03_RS03115;Dbxref=GenBank:WP_101457392.1;Name=WP_101457392.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728560.1;locus_tag=CYJ03_RS03115;product=pyruvate%2C phosphate dikinase;protein_id=WP_101457392.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	23207	23482	.	+	.	ID=gene-CYJ03_RS12260;Name=CYJ03_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12260;old_locus_tag=CYJ03_003110
NZ_PJUP02000006.1	GeneMarkS-2+	CDS	23207	23482	.	+	0	ID=cds-WP_241900534.1;Parent=gene-CYJ03_RS12260;Dbxref=GenBank:WP_241900534.1;Name=WP_241900534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12260;product=hypothetical protein;protein_id=WP_241900534.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	24050	25549	.	+	.	ID=gene-CYJ03_RS03125;Name=CYJ03_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03125;old_locus_tag=CYJ03_003115
NZ_PJUP02000006.1	Protein Homology	CDS	24050	25549	.	+	0	ID=cds-WP_101457393.1;Parent=gene-CYJ03_RS03125;Dbxref=GenBank:WP_101457393.1;Name=WP_101457393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728558.1;locus_tag=CYJ03_RS03125;product=coagulase domain-containing protein;protein_id=WP_101457393.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	25743	26447	.	+	.	ID=gene-CYJ03_RS03130;Name=CYJ03_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03130;old_locus_tag=CYJ03_003120
NZ_PJUP02000006.1	Protein Homology	CDS	25743	26447	.	+	0	ID=cds-WP_101457394.1;Parent=gene-CYJ03_RS03130;Dbxref=GenBank:WP_101457394.1;Name=WP_101457394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110168517.1;locus_tag=CYJ03_RS03130;product=exotoxin SpEX;protein_id=WP_101457394.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	26565	26948	.	-	.	ID=gene-CYJ03_RS03135;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03135;old_locus_tag=CYJ03_003125
NZ_PJUP02000006.1	Protein Homology	CDS	26565	26948	.	-	0	ID=cds-WP_014614860.1;Parent=gene-CYJ03_RS03135;Dbxref=GenBank:WP_014614860.1;Name=WP_014614860.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=CYJ03_RS03135;product=aspartate 1-decarboxylase;protein_id=WP_014614860.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	26945	27805	.	-	.	ID=gene-CYJ03_RS03140;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03140;old_locus_tag=CYJ03_003130
NZ_PJUP02000006.1	Protein Homology	CDS	26945	27805	.	-	0	ID=cds-WP_101431630.1;Parent=gene-CYJ03_RS03140;Dbxref=GenBank:WP_101431630.1;Name=WP_101431630.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166913.1;locus_tag=CYJ03_RS03140;product=pantoate--beta-alanine ligase;protein_id=WP_101431630.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	27802	28614	.	-	.	ID=gene-CYJ03_RS03145;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03145;old_locus_tag=CYJ03_003135
NZ_PJUP02000006.1	Protein Homology	CDS	27802	28614	.	-	0	ID=cds-WP_014614862.1;Parent=gene-CYJ03_RS03145;Dbxref=GenBank:WP_014614862.1;Name=WP_014614862.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614862.1;locus_tag=CYJ03_RS03145;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014614862.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	28866	29726	.	+	.	ID=gene-CYJ03_RS03150;Name=CYJ03_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03150;old_locus_tag=CYJ03_003140
NZ_PJUP02000006.1	Protein Homology	CDS	28866	29726	.	+	0	ID=cds-WP_104052143.1;Parent=gene-CYJ03_RS03150;Dbxref=GenBank:WP_104052143.1;Name=WP_104052143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168625.1;locus_tag=CYJ03_RS03150;product=oxidoreductase;protein_id=WP_104052143.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	29816	31141	.	-	.	ID=gene-CYJ03_RS03155;Name=CYJ03_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03155;old_locus_tag=CYJ03_003145
NZ_PJUP02000006.1	Protein Homology	CDS	29816	31141	.	-	0	ID=cds-WP_014614864.1;Parent=gene-CYJ03_RS03155;Dbxref=GenBank:WP_014614864.1;Name=WP_014614864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166916.1;locus_tag=CYJ03_RS03155;product=6-phospho-alpha-glucosidase;protein_id=WP_014614864.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	31142	32728	.	-	.	ID=gene-CYJ03_RS03160;Name=CYJ03_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03160;old_locus_tag=CYJ03_003150
NZ_PJUP02000006.1	Protein Homology	CDS	31142	32728	.	-	0	ID=cds-WP_020220130.1;Parent=gene-CYJ03_RS03160;Dbxref=GenBank:WP_020220130.1;Name=WP_020220130.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166917.1;locus_tag=CYJ03_RS03160;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_020220130.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	32997	33752	.	+	.	ID=gene-CYJ03_RS03165;Name=CYJ03_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03165;old_locus_tag=CYJ03_003155
NZ_PJUP02000006.1	Protein Homology	CDS	32997	33752	.	+	0	ID=cds-WP_014614866.1;Parent=gene-CYJ03_RS03165;Dbxref=GenBank:WP_014614866.1;Name=WP_014614866.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614866.1;locus_tag=CYJ03_RS03165;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014614866.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	33878	34438	.	-	.	ID=gene-CYJ03_RS03170;Name=CYJ03_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03170;old_locus_tag=CYJ03_003160
NZ_PJUP02000006.1	Protein Homology	CDS	33878	34438	.	-	0	ID=cds-WP_014614867.1;Parent=gene-CYJ03_RS03170;Dbxref=GenBank:WP_014614867.1;Name=WP_014614867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728551.1;locus_tag=CYJ03_RS03170;product=hypothetical protein;protein_id=WP_014614867.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	34751	35923	.	+	.	ID=gene-CYJ03_RS03175;Name=CYJ03_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03175;old_locus_tag=CYJ03_003165
NZ_PJUP02000006.1	Protein Homology	CDS	34751	35923	.	+	0	ID=cds-WP_014614872.1;Parent=gene-CYJ03_RS03175;Dbxref=GenBank:WP_014614872.1;Name=WP_014614872.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614872.1;locus_tag=CYJ03_RS03175;product=MFS transporter;protein_id=WP_014614872.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	36167	36595	.	+	.	ID=gene-CYJ03_RS03180;Name=CYJ03_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03180;old_locus_tag=CYJ03_003170
NZ_PJUP02000006.1	Protein Homology	CDS	36167	36595	.	+	0	ID=cds-WP_070407280.1;Parent=gene-CYJ03_RS03180;Dbxref=GenBank:WP_070407280.1;Name=WP_070407280.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614873.1;locus_tag=CYJ03_RS03180;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_070407280.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	36789	37979	.	-	.	ID=gene-CYJ03_RS03185;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=CYJ03_RS03185;old_locus_tag=CYJ03_003175
NZ_PJUP02000006.1	Protein Homology	CDS	36789	37979	.	-	0	ID=cds-WP_014614875.1;Parent=gene-CYJ03_RS03185;Dbxref=GenBank:WP_014614875.1;Name=WP_014614875.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614875.1;locus_tag=CYJ03_RS03185;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_014614875.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	37991	38731	.	-	.	ID=gene-CYJ03_RS03190;Name=CYJ03_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03190;old_locus_tag=CYJ03_003180
NZ_PJUP02000006.1	Protein Homology	CDS	37991	38731	.	-	0	ID=cds-WP_014614876.1;Parent=gene-CYJ03_RS03190;Dbxref=GenBank:WP_014614876.1;Name=WP_014614876.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=CYJ03_RS03190;product=ABC transporter ATP-binding protein;protein_id=WP_014614876.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	38725	39543	.	-	.	ID=gene-CYJ03_RS03195;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03195;old_locus_tag=CYJ03_003185
NZ_PJUP02000006.1	Protein Homology	CDS	38725	39543	.	-	0	ID=cds-WP_014614877.1;Parent=gene-CYJ03_RS03195;Dbxref=GenBank:WP_014614877.1;Name=WP_014614877.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=CYJ03_RS03195;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_014614877.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	39543	40406	.	-	.	ID=gene-CYJ03_RS03200;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=CYJ03_RS03200;old_locus_tag=CYJ03_003190
NZ_PJUP02000006.1	Protein Homology	CDS	39543	40406	.	-	0	ID=cds-WP_104052144.1;Parent=gene-CYJ03_RS03200;Dbxref=GenBank:WP_104052144.1;Name=WP_104052144.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614878.1;locus_tag=CYJ03_RS03200;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_104052144.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	40408	41340	.	-	.	ID=gene-CYJ03_RS03205;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=CYJ03_RS03205;old_locus_tag=CYJ03_003195
NZ_PJUP02000006.1	Protein Homology	CDS	40408	41340	.	-	0	ID=cds-WP_015728548.1;Parent=gene-CYJ03_RS03205;Dbxref=GenBank:WP_015728548.1;Name=WP_015728548.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728548.1;locus_tag=CYJ03_RS03205;product=nickel/cobalt ABC transporter permease;protein_id=WP_015728548.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	41353	42951	.	-	.	ID=gene-CYJ03_RS03210;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03210;old_locus_tag=CYJ03_003200
NZ_PJUP02000006.1	Protein Homology	CDS	41353	42951	.	-	0	ID=cds-WP_181137775.1;Parent=gene-CYJ03_RS03210;Dbxref=GenBank:WP_181137775.1;Name=WP_181137775.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=CYJ03_RS03210;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_181137775.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	43189	44484	.	-	.	ID=gene-CYJ03_RS03215;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=CYJ03_RS03215;old_locus_tag=CYJ03_003205
NZ_PJUP02000006.1	Protein Homology	CDS	43189	44484	.	-	0	ID=cds-WP_104052146.1;Parent=gene-CYJ03_RS03215;Dbxref=GenBank:WP_104052146.1;Name=WP_104052146.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614881.1;locus_tag=CYJ03_RS03215;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_104052146.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	44487	45296	.	-	.	ID=gene-CYJ03_RS03220;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=CYJ03_RS03220;old_locus_tag=CYJ03_003210
NZ_PJUP02000006.1	Protein Homology	CDS	44487	45296	.	-	0	ID=cds-WP_370863218.1;Parent=gene-CYJ03_RS03220;Dbxref=GenBank:WP_370863218.1;Name=WP_370863218.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167820.1;locus_tag=CYJ03_RS03220;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_370863218.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	45315	46124	.	-	.	ID=gene-CYJ03_RS03225;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=CYJ03_RS03225;old_locus_tag=CYJ03_003215
NZ_PJUP02000006.1	Protein Homology	CDS	45315	46124	.	-	0	ID=cds-WP_104052147.1;Parent=gene-CYJ03_RS03225;Dbxref=GenBank:WP_104052147.1;Name=WP_104052147.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614883.1;locus_tag=CYJ03_RS03225;product=histidine racemase CntK;protein_id=WP_104052147.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	46488	47210	.	-	.	ID=gene-CYJ03_RS03230;Name=CYJ03_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03230;old_locus_tag=CYJ03_003220
NZ_PJUP02000006.1	Protein Homology	CDS	46488	47210	.	-	0	ID=cds-WP_014614884.1;Parent=gene-CYJ03_RS03230;Dbxref=GenBank:WP_014614884.1;Name=WP_014614884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614884.1;locus_tag=CYJ03_RS03230;product=hypothetical protein;protein_id=WP_014614884.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	47569	48291	.	+	.	ID=gene-CYJ03_RS03235;Name=CYJ03_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03235;old_locus_tag=CYJ03_003225
NZ_PJUP02000006.1	Protein Homology	CDS	47569	48291	.	+	0	ID=cds-WP_104052148.1;Parent=gene-CYJ03_RS03235;Dbxref=GenBank:WP_104052148.1;Name=WP_104052148.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614885.1;locus_tag=CYJ03_RS03235;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_104052148.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	48297	49682	.	+	.	ID=gene-CYJ03_RS03240;Name=CYJ03_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03240;old_locus_tag=CYJ03_003230
NZ_PJUP02000006.1	Protein Homology	CDS	48297	49682	.	+	0	ID=cds-WP_104052149.1;Parent=gene-CYJ03_RS03240;Dbxref=GenBank:WP_104052149.1;Name=WP_104052149.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614886.1;locus_tag=CYJ03_RS03240;product=APC family permease;protein_id=WP_104052149.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	49926	51980	.	-	.	ID=gene-CYJ03_RS03245;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CYJ03_RS03245;old_locus_tag=CYJ03_003235
NZ_PJUP02000006.1	Protein Homology	CDS	49926	51980	.	-	0	ID=cds-WP_104052150.1;Parent=gene-CYJ03_RS03245;Dbxref=GenBank:WP_104052150.1;Name=WP_104052150.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614887.1;locus_tag=CYJ03_RS03245;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_104052150.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	52639	54591	.	-	.	ID=gene-CYJ03_RS03250;Name=spsN;gbkey=Gene;gene=spsN;gene_biotype=protein_coding;locus_tag=CYJ03_RS03250;old_locus_tag=CYJ03_003240
NZ_PJUP02000006.1	Protein Homology	CDS	52639	54591	.	-	0	ID=cds-WP_104052151.1;Parent=gene-CYJ03_RS03250;Dbxref=GenBank:WP_104052151.1;Name=WP_104052151.1;gbkey=CDS;gene=spsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614888.1;locus_tag=CYJ03_RS03250;product=LPXTG-anchored surface protein SpsN;protein_id=WP_104052151.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	55436	56428	.	+	.	ID=gene-CYJ03_RS03255;Name=CYJ03_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03255;old_locus_tag=CYJ03_003245
NZ_PJUP02000006.1	Protein Homology	CDS	55436	56428	.	+	0	ID=cds-WP_258058097.1;Parent=gene-CYJ03_RS03255;Dbxref=GenBank:WP_258058097.1;Name=WP_258058097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166939.1;locus_tag=CYJ03_RS03255;product=thermonuclease family protein;protein_id=WP_258058097.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	56837	57751	.	+	.	ID=gene-CYJ03_RS03260;Name=CYJ03_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03260;old_locus_tag=CYJ03_003250
NZ_PJUP02000006.1	Protein Homology	CDS	56837	57751	.	+	0	ID=cds-WP_014614890.1;Parent=gene-CYJ03_RS03260;Dbxref=GenBank:WP_014614890.1;Name=WP_014614890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614890.1;locus_tag=CYJ03_RS03260;product=TDT family transporter;protein_id=WP_014614890.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	58159	58527	.	-	.	ID=gene-CYJ03_RS03265;Name=CYJ03_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03265;old_locus_tag=CYJ03_003255
NZ_PJUP02000006.1	GeneMarkS-2+	CDS	58159	58527	.	-	0	ID=cds-WP_104052153.1;Parent=gene-CYJ03_RS03265;Dbxref=GenBank:WP_104052153.1;Name=WP_104052153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS03265;product=hypothetical protein;protein_id=WP_104052153.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	58594	58794	.	-	.	ID=gene-CYJ03_RS12265;Name=CYJ03_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12265;old_locus_tag=CYJ03_003260
NZ_PJUP02000006.1	GeneMarkS-2+	CDS	58594	58794	.	-	0	ID=cds-WP_181137776.1;Parent=gene-CYJ03_RS12265;Dbxref=GenBank:WP_181137776.1;Name=WP_181137776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12265;product=hypothetical protein;protein_id=WP_181137776.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	58817	59059	.	-	.	ID=gene-CYJ03_RS03275;Name=CYJ03_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03275;old_locus_tag=CYJ03_003265
NZ_PJUP02000006.1	GeneMarkS-2+	CDS	58817	59059	.	-	0	ID=cds-WP_181137777.1;Parent=gene-CYJ03_RS03275;Dbxref=GenBank:WP_181137777.1;Name=WP_181137777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS03275;product=Abi family protein;protein_id=WP_181137777.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	pseudogene	59576	59719	.	+	.	ID=gene-CYJ03_RS12505;Name=CYJ03_RS12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12505;old_locus_tag=CYJ03_003270;partial=true;pseudo=true;start_range=.,59576
NZ_PJUP02000006.1	Protein Homology	CDS	59576	59719	.	+	0	ID=cds-CYJ03_RS12505;Parent=gene-CYJ03_RS12505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=CYJ03_RS12505;partial=true;product=site-specific integrase;pseudo=true;start_range=.,59576;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	59802	61343	.	-	.	ID=gene-CYJ03_RS03285;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03285;old_locus_tag=CYJ03_003275
NZ_PJUP02000006.1	Protein Homology	CDS	59802	61343	.	-	0	ID=cds-WP_104052156.1;Parent=gene-CYJ03_RS03285;Dbxref=GenBank:WP_104052156.1;Name=WP_104052156.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ03_RS03285;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_104052156.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	61366	62832	.	-	.	ID=gene-CYJ03_RS03290;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03290;old_locus_tag=CYJ03_003280
NZ_PJUP02000006.1	Protein Homology	CDS	61366	62832	.	-	0	ID=cds-WP_014614897.1;Parent=gene-CYJ03_RS03290;Dbxref=GenBank:WP_014614897.1;Name=WP_014614897.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CYJ03_RS03290;product=IMP dehydrogenase;protein_id=WP_014614897.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	62870	64138	.	-	.	ID=gene-CYJ03_RS03295;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=CYJ03_RS03295;old_locus_tag=CYJ03_003285
NZ_PJUP02000006.1	Protein Homology	CDS	62870	64138	.	-	0	ID=cds-WP_104052157.1;Parent=gene-CYJ03_RS03295;Dbxref=GenBank:WP_104052157.1;Name=WP_104052157.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CYJ03_RS03295;product=xanthine permease PbuX;protein_id=WP_104052157.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	64135	64719	.	-	.	ID=gene-CYJ03_RS03300;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CYJ03_RS03300;old_locus_tag=CYJ03_003290
NZ_PJUP02000006.1	Protein Homology	CDS	64135	64719	.	-	0	ID=cds-WP_014614899.1;Parent=gene-CYJ03_RS03300;Dbxref=GenBank:WP_014614899.1;Name=WP_014614899.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166944.1;locus_tag=CYJ03_RS03300;product=xanthine phosphoribosyltransferase;protein_id=WP_014614899.1;transl_table=11
NZ_PJUP02000006.1	cmsearch	riboswitch	64903	65005	.	-	.	ID=id-NZ_PJUP02000006.1:64903..65005;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00167,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000006.1	RefSeq	gene	65180	65602	.	+	.	ID=gene-CYJ03_RS03305;Name=CYJ03_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03305;old_locus_tag=CYJ03_003295
NZ_PJUP02000006.1	Protein Homology	CDS	65180	65602	.	+	0	ID=cds-WP_014614900.1;Parent=gene-CYJ03_RS03305;Dbxref=GenBank:WP_014614900.1;Name=WP_014614900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=CYJ03_RS03305;product=general stress protein;protein_id=WP_014614900.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	65798	66472	.	+	.	ID=gene-CYJ03_RS03310;Name=CYJ03_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03310;old_locus_tag=CYJ03_003300
NZ_PJUP02000006.1	Protein Homology	CDS	65798	66472	.	+	0	ID=cds-WP_015728533.1;Parent=gene-CYJ03_RS03310;Dbxref=GenBank:WP_015728533.1;Name=WP_015728533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=CYJ03_RS03310;product=hypothetical protein;protein_id=WP_015728533.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	66586	67185	.	+	.	ID=gene-CYJ03_RS03315;Name=CYJ03_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03315;old_locus_tag=CYJ03_003305
NZ_PJUP02000006.1	Protein Homology	CDS	66586	67185	.	+	0	ID=cds-WP_014614902.1;Parent=gene-CYJ03_RS03315;Dbxref=GenBank:WP_014614902.1;Name=WP_014614902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=CYJ03_RS03315;product=hypothetical protein;protein_id=WP_014614902.1;transl_table=11
NZ_PJUP02000006.1	cmsearch	riboswitch	67267	67369	.	+	.	ID=id-NZ_PJUP02000006.1:67267..67369;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000006.1	RefSeq	gene	67460	68566	.	+	.	ID=gene-CYJ03_RS03320;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CYJ03_RS03320;old_locus_tag=CYJ03_003310
NZ_PJUP02000006.1	Protein Homology	CDS	67460	68566	.	+	0	ID=cds-WP_101485010.1;Parent=gene-CYJ03_RS03320;Dbxref=GenBank:WP_101485010.1;Name=WP_101485010.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=CYJ03_RS03320;product=glycine oxidase ThiO;protein_id=WP_101485010.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	68641	70032	.	+	.	ID=gene-CYJ03_RS03325;Name=CYJ03_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03325;old_locus_tag=CYJ03_003315
NZ_PJUP02000006.1	Protein Homology	CDS	68641	70032	.	+	0	ID=cds-WP_101485009.1;Parent=gene-CYJ03_RS03325;Dbxref=GenBank:WP_101485009.1;Name=WP_101485009.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=CYJ03_RS03325;product=L-cystine transporter;protein_id=WP_101485009.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	70126	70770	.	-	.	ID=gene-CYJ03_RS03330;Name=CYJ03_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03330;old_locus_tag=CYJ03_003320
NZ_PJUP02000006.1	Protein Homology	CDS	70126	70770	.	-	0	ID=cds-WP_101485008.1;Parent=gene-CYJ03_RS03330;Dbxref=GenBank:WP_101485008.1;Name=WP_101485008.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728530.1;locus_tag=CYJ03_RS03330;product=ATP-binding cassette domain-containing protein;protein_id=WP_101485008.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	70767	71096	.	-	.	ID=gene-CYJ03_RS03335;Name=CYJ03_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03335;old_locus_tag=CYJ03_003325
NZ_PJUP02000006.1	Protein Homology	CDS	70767	71096	.	-	0	ID=cds-WP_065354648.1;Parent=gene-CYJ03_RS03335;Dbxref=GenBank:WP_065354648.1;Name=WP_065354648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614906.1;locus_tag=CYJ03_RS03335;product=YxeA family protein;protein_id=WP_065354648.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	71100	73067	.	-	.	ID=gene-CYJ03_RS03340;Name=CYJ03_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03340;old_locus_tag=CYJ03_003330
NZ_PJUP02000006.1	Protein Homology	CDS	71100	73067	.	-	0	ID=cds-WP_065354649.1;Parent=gene-CYJ03_RS03340;Dbxref=GenBank:WP_065354649.1;Name=WP_065354649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614907.1;locus_tag=CYJ03_RS03340;product=DUF1430 domain-containing protein;protein_id=WP_065354649.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	73325	74080	.	-	.	ID=gene-CYJ03_RS03345;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03345;old_locus_tag=CYJ03_003335
NZ_PJUP02000006.1	Protein Homology	CDS	73325	74080	.	-	0	ID=cds-WP_096533765.1;Parent=gene-CYJ03_RS03345;Dbxref=GenBank:WP_096533765.1;Name=WP_096533765.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276836.1;locus_tag=CYJ03_RS03345;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_096533765.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	74633	75202	.	+	.	ID=gene-CYJ03_RS03350;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03350;old_locus_tag=CYJ03_003340
NZ_PJUP02000006.1	Protein Homology	CDS	74633	75202	.	+	0	ID=cds-WP_014614909.1;Parent=gene-CYJ03_RS03350;Dbxref=GenBank:WP_014614909.1;Name=WP_014614909.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CYJ03_RS03350;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_014614909.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	75217	76740	.	+	.	ID=gene-CYJ03_RS03355;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03355;old_locus_tag=CYJ03_003345
NZ_PJUP02000006.1	Protein Homology	CDS	75217	76740	.	+	0	ID=cds-WP_015728526.1;Parent=gene-CYJ03_RS03355;Dbxref=GenBank:WP_015728526.1;Name=WP_015728526.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451490.1;locus_tag=CYJ03_RS03355;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_015728526.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	76941	77882	.	-	.	ID=gene-CYJ03_RS03360;Name=CYJ03_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03360;old_locus_tag=CYJ03_003350
NZ_PJUP02000006.1	Protein Homology	CDS	76941	77882	.	-	0	ID=cds-WP_015728525.1;Parent=gene-CYJ03_RS03360;Dbxref=GenBank:WP_015728525.1;Name=WP_015728525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=CYJ03_RS03360;product=DUF1002 domain-containing protein;protein_id=WP_015728525.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	78000	78989	.	-	.	ID=gene-CYJ03_RS03365;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03365;old_locus_tag=CYJ03_003355
NZ_PJUP02000006.1	Protein Homology	CDS	78000	78989	.	-	0	ID=cds-WP_014614912.1;Parent=gene-CYJ03_RS03365;Dbxref=GenBank:WP_014614912.1;Name=WP_014614912.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=CYJ03_RS03365;product=biotin synthase BioB;protein_id=WP_014614912.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	79195	79572	.	+	.	ID=gene-CYJ03_RS03370;Name=CYJ03_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03370;old_locus_tag=CYJ03_003360
NZ_PJUP02000006.1	Protein Homology	CDS	79195	79572	.	+	0	ID=cds-WP_063279066.1;Parent=gene-CYJ03_RS03370;Dbxref=GenBank:WP_063279066.1;Name=WP_063279066.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=CYJ03_RS03370;product=iron chaperone;protein_id=WP_063279066.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	79889	80914	.	+	.	ID=gene-CYJ03_RS03375;Name=CYJ03_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03375;old_locus_tag=CYJ03_003365
NZ_PJUP02000006.1	Protein Homology	CDS	79889	80914	.	+	0	ID=cds-WP_015728523.1;Parent=gene-CYJ03_RS03375;Dbxref=GenBank:WP_015728523.1;Name=WP_015728523.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166961.1;locus_tag=CYJ03_RS03375;product=methionine ABC transporter ATP-binding protein;protein_id=WP_015728523.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	80908	81567	.	+	.	ID=gene-CYJ03_RS03380;Name=CYJ03_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03380;old_locus_tag=CYJ03_003370
NZ_PJUP02000006.1	Protein Homology	CDS	80908	81567	.	+	0	ID=cds-WP_104052158.1;Parent=gene-CYJ03_RS03380;Dbxref=GenBank:WP_104052158.1;Name=WP_104052158.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CYJ03_RS03380;product=methionine ABC transporter permease;protein_id=WP_104052158.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	81583	82422	.	+	.	ID=gene-CYJ03_RS03385;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03385;old_locus_tag=CYJ03_003375
NZ_PJUP02000006.1	Protein Homology	CDS	81583	82422	.	+	0	ID=cds-WP_014614916.1;Parent=gene-CYJ03_RS03385;Dbxref=GenBank:WP_014614916.1;Name=WP_014614916.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425688.1;locus_tag=CYJ03_RS03385;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_014614916.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	82580	83575	.	-	.	ID=gene-CYJ03_RS03390;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CYJ03_RS03390;old_locus_tag=CYJ03_003380
NZ_PJUP02000006.1	Protein Homology	CDS	82580	83575	.	-	0	ID=cds-WP_063284543.1;Parent=gene-CYJ03_RS03390;Dbxref=GenBank:WP_063284543.1;Name=WP_063284543.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728522.1;locus_tag=CYJ03_RS03390;product=adenosine deaminase;protein_id=WP_063284543.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	83968	85959	.	+	.	ID=gene-CYJ03_RS03395;Name=CYJ03_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03395;old_locus_tag=CYJ03_003385
NZ_PJUP02000006.1	Protein Homology	CDS	83968	85959	.	+	0	ID=cds-WP_104052159.1;Parent=gene-CYJ03_RS03395;Dbxref=GenBank:WP_104052159.1;Name=WP_104052159.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=CYJ03_RS03395;product=catalase;protein_id=WP_104052159.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	86025	87134	.	-	.	ID=gene-CYJ03_RS03400;Name=CYJ03_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03400;old_locus_tag=CYJ03_003390
NZ_PJUP02000006.1	Protein Homology	CDS	86025	87134	.	-	0	ID=cds-WP_063278725.1;Parent=gene-CYJ03_RS03400;Dbxref=GenBank:WP_063278725.1;Name=WP_063278725.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009362017.1;locus_tag=CYJ03_RS03400;product=ABC transporter ATP-binding protein;protein_id=WP_063278725.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	87253	88374	.	-	.	ID=gene-CYJ03_RS03405;Name=CYJ03_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03405;old_locus_tag=CYJ03_003395
NZ_PJUP02000006.1	Protein Homology	CDS	87253	88374	.	-	0	ID=cds-WP_063278724.1;Parent=gene-CYJ03_RS03405;Dbxref=GenBank:WP_063278724.1;Name=WP_063278724.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000408.1;locus_tag=CYJ03_RS03405;product=Gfo/Idh/MocA family protein;protein_id=WP_063278724.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	88389	89216	.	-	.	ID=gene-CYJ03_RS03410;Name=CYJ03_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03410;old_locus_tag=CYJ03_003400
NZ_PJUP02000006.1	Protein Homology	CDS	88389	89216	.	-	0	ID=cds-WP_063278723.1;Parent=gene-CYJ03_RS03410;Dbxref=GenBank:WP_063278723.1;Name=WP_063278723.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000409.1;locus_tag=CYJ03_RS03410;product=carbohydrate ABC transporter permease;protein_id=WP_063278723.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	89218	90117	.	-	.	ID=gene-CYJ03_RS03415;Name=CYJ03_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03415;old_locus_tag=CYJ03_003405
NZ_PJUP02000006.1	Protein Homology	CDS	89218	90117	.	-	0	ID=cds-WP_063278722.1;Parent=gene-CYJ03_RS03415;Dbxref=GenBank:WP_063278722.1;Name=WP_063278722.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=CYJ03_RS03415;product=carbohydrate ABC transporter permease;protein_id=WP_063278722.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	90127	91452	.	-	.	ID=gene-CYJ03_RS03420;Name=CYJ03_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03420;old_locus_tag=CYJ03_003410
NZ_PJUP02000006.1	Protein Homology	CDS	90127	91452	.	-	0	ID=cds-WP_063278721.1;Parent=gene-CYJ03_RS03420;Dbxref=GenBank:WP_063278721.1;Name=WP_063278721.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000410.1;locus_tag=CYJ03_RS03420;product=ABC transporter substrate-binding protein;protein_id=WP_063278721.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	91556	92386	.	-	.	ID=gene-CYJ03_RS03425;Name=CYJ03_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03425;old_locus_tag=CYJ03_003415
NZ_PJUP02000006.1	Protein Homology	CDS	91556	92386	.	-	0	ID=cds-WP_181022581.1;Parent=gene-CYJ03_RS03425;Dbxref=GenBank:WP_181022581.1;Name=WP_181022581.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=CYJ03_RS03425;product=helix-turn-helix domain-containing protein;protein_id=WP_181022581.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	92584	92826	.	-	.	ID=gene-CYJ03_RS03430;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CYJ03_RS03430;old_locus_tag=CYJ03_003420
NZ_PJUP02000006.1	Protein Homology	CDS	92584	92826	.	-	0	ID=cds-WP_014614919.1;Parent=gene-CYJ03_RS03430;Dbxref=GenBank:WP_014614919.1;Name=WP_014614919.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=CYJ03_RS03430;product=30S ribosomal protein S18;protein_id=WP_014614919.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	92880	93386	.	-	.	ID=gene-CYJ03_RS03435;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CYJ03_RS03435;old_locus_tag=CYJ03_003425
NZ_PJUP02000006.1	Protein Homology	CDS	92880	93386	.	-	0	ID=cds-WP_014614920.1;Parent=gene-CYJ03_RS03435;Dbxref=GenBank:WP_014614920.1;Name=WP_014614920.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=CYJ03_RS03435;product=single-stranded DNA-binding protein;protein_id=WP_014614920.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	93409	93705	.	-	.	ID=gene-CYJ03_RS03440;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03440;old_locus_tag=CYJ03_003430
NZ_PJUP02000006.1	Protein Homology	CDS	93409	93705	.	-	0	ID=cds-WP_014614921.1;Parent=gene-CYJ03_RS03440;Dbxref=GenBank:WP_014614921.1;Name=WP_014614921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=CYJ03_RS03440;product=30S ribosomal protein S6;protein_id=WP_014614921.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	94042	95568	.	+	.	ID=gene-CYJ03_RS03445;Name=sbi;gbkey=Gene;gene=sbi;gene_biotype=protein_coding;gene_synonym=spsK;locus_tag=CYJ03_RS03445;old_locus_tag=CYJ03_003435
NZ_PJUP02000006.1	Protein Homology	CDS	94042	95568	.	+	0	ID=cds-WP_104052160.1;Parent=gene-CYJ03_RS03445;Dbxref=GenBank:WP_104052160.1;Name=WP_104052160.1;gbkey=CDS;gene=sbi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728518.1;locus_tag=CYJ03_RS03445;product=Ig-binding surface protein Sbi/SpsK;protein_id=WP_104052160.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	95622	96431	.	-	.	ID=gene-CYJ03_RS03450;Name=CYJ03_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03450;old_locus_tag=CYJ03_003440
NZ_PJUP02000006.1	Protein Homology	CDS	95622	96431	.	-	0	ID=cds-WP_037541946.1;Parent=gene-CYJ03_RS03450;Dbxref=GenBank:WP_037541946.1;Name=WP_037541946.1;Ontology_term=GO:0055085,GO:0140359;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220246.1;locus_tag=CYJ03_RS03450;product=ABC transporter permease subunit;protein_id=WP_037541946.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	96424	97359	.	-	.	ID=gene-CYJ03_RS03455;Name=CYJ03_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03455;old_locus_tag=CYJ03_003445
NZ_PJUP02000006.1	Protein Homology	CDS	96424	97359	.	-	0	ID=cds-WP_014614924.1;Parent=gene-CYJ03_RS03455;Dbxref=GenBank:WP_014614924.1;Name=WP_014614924.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614924.1;locus_tag=CYJ03_RS03455;product=ABC transporter ATP-binding protein;protein_id=WP_014614924.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	97647	98744	.	-	.	ID=gene-CYJ03_RS03460;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03460;old_locus_tag=CYJ03_003450
NZ_PJUP02000006.1	Protein Homology	CDS	97647	98744	.	-	0	ID=cds-WP_104052161.1;Parent=gene-CYJ03_RS03460;Dbxref=GenBank:WP_104052161.1;Name=WP_104052161.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CYJ03_RS03460;product=redox-regulated ATPase YchF;protein_id=WP_104052161.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	98735	98956	.	-	.	ID=gene-CYJ03_RS03465;Name=CYJ03_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03465;old_locus_tag=CYJ03_003455
NZ_PJUP02000006.1	Protein Homology	CDS	98735	98956	.	-	0	ID=cds-WP_104052162.1;Parent=gene-CYJ03_RS03465;Dbxref=GenBank:WP_104052162.1;Name=WP_104052162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614931.1;locus_tag=CYJ03_RS03465;product=DUF951 domain-containing protein;protein_id=WP_104052162.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	98969	99859	.	-	.	ID=gene-CYJ03_RS03470;Name=CYJ03_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03470;old_locus_tag=CYJ03_003460
NZ_PJUP02000006.1	Protein Homology	CDS	98969	99859	.	-	0	ID=cds-WP_014614932.1;Parent=gene-CYJ03_RS03470;Dbxref=GenBank:WP_014614932.1;Name=WP_014614932.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169154.1;locus_tag=CYJ03_RS03470;product=mechanosensitive ion channel family protein;protein_id=WP_014614932.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	99925	100875	.	-	.	ID=gene-CYJ03_RS03475;Name=CYJ03_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03475;old_locus_tag=CYJ03_003465
NZ_PJUP02000006.1	Protein Homology	CDS	99925	100875	.	-	0	ID=cds-WP_104052163.1;Parent=gene-CYJ03_RS03475;Dbxref=GenBank:WP_104052163.1;Name=WP_104052163.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614933.1;locus_tag=CYJ03_RS03475;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_104052163.1;transl_table=11
NZ_PJUP02000006.1	cmsearch	binding_site	100935	101249	.	+	.	ID=id-NZ_PJUP02000006.1:100935..101249;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000006.1	RefSeq	gene	101314	102426	.	+	.	ID=gene-CYJ03_RS03480;Name=CYJ03_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03480;old_locus_tag=CYJ03_003470
NZ_PJUP02000006.1	Protein Homology	CDS	101314	102426	.	+	0	ID=cds-WP_063278716.1;Parent=gene-CYJ03_RS03480;Dbxref=GenBank:WP_063278716.1;Name=WP_063278716.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220248.1;locus_tag=CYJ03_RS03480;product=PLP-dependent transferase;protein_id=WP_063278716.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	102413	103588	.	+	.	ID=gene-CYJ03_RS03485;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03485;old_locus_tag=CYJ03_003475
NZ_PJUP02000006.1	Protein Homology	CDS	102413	103588	.	+	0	ID=cds-WP_104052164.1;Parent=gene-CYJ03_RS03485;Dbxref=GenBank:WP_104052164.1;Name=WP_104052164.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728512.1;locus_tag=CYJ03_RS03485;product=cystathionine beta-lyase MetC;protein_id=WP_104052164.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	103542	105383	.	+	.	ID=gene-CYJ03_RS03490;Name=CYJ03_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03490;old_locus_tag=CYJ03_003480
NZ_PJUP02000006.1	Protein Homology	CDS	103542	105383	.	+	0	ID=cds-WP_014614936.1;Parent=gene-CYJ03_RS03490;Dbxref=GenBank:WP_014614936.1;Name=WP_014614936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=CYJ03_RS03490;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_014614936.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	105377	107620	.	+	.	ID=gene-CYJ03_RS03495;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CYJ03_RS03495;old_locus_tag=CYJ03_003485
NZ_PJUP02000006.1	Protein Homology	CDS	105377	107620	.	+	0	ID=cds-WP_075773654.1;Parent=gene-CYJ03_RS03495;Dbxref=GenBank:WP_075773654.1;Name=WP_075773654.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166028.1;locus_tag=CYJ03_RS03495;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_075773654.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	108306	109139	.	-	.	ID=gene-CYJ03_RS03500;Name=CYJ03_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03500;old_locus_tag=CYJ03_003490
NZ_PJUP02000006.1	Protein Homology	CDS	108306	109139	.	-	0	ID=cds-WP_104052165.1;Parent=gene-CYJ03_RS03500;Dbxref=GenBank:WP_104052165.1;Name=WP_104052165.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=CYJ03_RS03500;product=urease accessory protein UreD;protein_id=WP_104052165.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	109139	109750	.	-	.	ID=gene-CYJ03_RS03505;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CYJ03_RS03505;old_locus_tag=CYJ03_003495
NZ_PJUP02000006.1	Protein Homology	CDS	109139	109750	.	-	0	ID=cds-WP_014614939.1;Parent=gene-CYJ03_RS03505;Dbxref=GenBank:WP_014614939.1;Name=WP_014614939.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614939.1;locus_tag=CYJ03_RS03505;product=urease accessory protein UreG;protein_id=WP_014614939.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	109763	110455	.	-	.	ID=gene-CYJ03_RS03510;Name=CYJ03_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03510;old_locus_tag=CYJ03_003500
NZ_PJUP02000006.1	Protein Homology	CDS	109763	110455	.	-	0	ID=cds-WP_104052166.1;Parent=gene-CYJ03_RS03510;Dbxref=GenBank:WP_104052166.1;Name=WP_104052166.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=CYJ03_RS03510;product=urease accessory protein UreF;protein_id=WP_104052166.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	110448	110903	.	-	.	ID=gene-CYJ03_RS03515;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=CYJ03_RS03515;old_locus_tag=CYJ03_003505
NZ_PJUP02000006.1	Protein Homology	CDS	110448	110903	.	-	0	ID=cds-WP_096548391.1;Parent=gene-CYJ03_RS03515;Dbxref=GenBank:WP_096548391.1;Name=WP_096548391.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=CYJ03_RS03515;product=urease accessory protein UreE;protein_id=WP_096548391.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	gene	111649	112566	.	+	.	ID=gene-CYJ03_RS03520;Name=CYJ03_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03520;old_locus_tag=CYJ03_003510
NZ_PJUP02000006.1	Protein Homology	CDS	111649	112566	.	+	0	ID=cds-WP_014614942.1;Parent=gene-CYJ03_RS03520;Dbxref=GenBank:WP_014614942.1;Name=WP_014614942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614942.1;locus_tag=CYJ03_RS03520;product=DUF5996 family protein;protein_id=WP_014614942.1;transl_table=11
NZ_PJUP02000006.1	RefSeq	pseudogene	112658	113152	.	-	.	ID=gene-CYJ03_RS12730;Name=CYJ03_RS12730;end_range=113152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12730;old_locus_tag=CYJ03_003515;partial=true;pseudo=true
NZ_PJUP02000006.1	Protein Homology	CDS	112658	113152	.	-	0	ID=cds-CYJ03_RS12730;Parent=gene-CYJ03_RS12730;Note=too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=113152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12730;partial=true;product=group II intron maturase-specific domain-containing protein;pseudo=true;transl_table=11
NZ_PJUP02000006.1	RefSeq	pseudogene	113165	113260	.	+	.	ID=gene-CYJ03_RS12785;Name=CYJ03_RS12785;end_range=113260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12785;old_locus_tag=CYJ03_003520;partial=true;pseudo=true;start_range=.,113165
NZ_PJUP02000006.1	Protein Homology	CDS	113165	113260	.	+	0	ID=cds-CYJ03_RS12785;Parent=gene-CYJ03_RS12785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=113260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610254.1;locus_tag=CYJ03_RS12785;partial=true;product=SdrD B-like domain-containing protein;pseudo=true;start_range=.,113165;transl_table=11
NZ_PJUP02000006.1	RefSeq	pseudogene	113248	113340	.	-	.	ID=gene-CYJ03_RS12790;Name=CYJ03_RS12790;end_range=113340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12790;partial=true;pseudo=true;start_range=.,113248
NZ_PJUP02000006.1	Protein Homology	CDS	113248	113340	.	-	0	ID=cds-CYJ03_RS12790;Parent=gene-CYJ03_RS12790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005524;end_range=113340,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498614.1;locus_tag=CYJ03_RS12790;partial=true;product=DNA gyrase C-terminal beta-propeller domain-containing protein;pseudo=true;start_range=.,113248;transl_table=11
##sequence-region NZ_PJUP02000050.1 1 6600
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000050.1	RefSeq	region	1	6600	.	+	.	ID=NZ_PJUP02000050.1:1..6600;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000050.1	RefSeq	gene	84	155	.	+	.	ID=gene-CYJ03_RS12055;Name=CYJ03_RS12055;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12055;old_locus_tag=CYJ03_012045
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	84	155	.	+	.	ID=rna-CYJ03_RS12055;Parent=gene-CYJ03_RS12055;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12055;product=tRNA-Glu
NZ_PJUP02000050.1	tRNAscan-SE	exon	84	155	.	+	.	ID=exon-CYJ03_RS12055-1;Parent=rna-CYJ03_RS12055;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12055;product=tRNA-Glu
NZ_PJUP02000050.1	RefSeq	gene	266	339	.	+	.	ID=gene-CYJ03_RS12060;Name=CYJ03_RS12060;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12060;old_locus_tag=CYJ03_012050
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	266	339	.	+	.	ID=rna-CYJ03_RS12060;Parent=gene-CYJ03_RS12060;anticodon=(pos:300..302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12060;product=tRNA-Met
NZ_PJUP02000050.1	tRNAscan-SE	exon	266	339	.	+	.	ID=exon-CYJ03_RS12060-1;Parent=rna-CYJ03_RS12060;anticodon=(pos:300..302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12060;product=tRNA-Met
NZ_PJUP02000050.1	RefSeq	gene	351	427	.	+	.	ID=gene-CYJ03_RS12065;Name=CYJ03_RS12065;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12065;old_locus_tag=CYJ03_012055
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	351	427	.	+	.	ID=rna-CYJ03_RS12065;Parent=gene-CYJ03_RS12065;anticodon=(pos:385..387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12065;product=tRNA-Asp
NZ_PJUP02000050.1	tRNAscan-SE	exon	351	427	.	+	.	ID=exon-CYJ03_RS12065-1;Parent=rna-CYJ03_RS12065;anticodon=(pos:385..387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12065;product=tRNA-Asp
NZ_PJUP02000050.1	RefSeq	gene	438	510	.	+	.	ID=gene-CYJ03_RS12070;Name=CYJ03_RS12070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12070;old_locus_tag=CYJ03_012060
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	438	510	.	+	.	ID=rna-CYJ03_RS12070;Parent=gene-CYJ03_RS12070;anticodon=(pos:471..473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12070;product=tRNA-Phe
NZ_PJUP02000050.1	tRNAscan-SE	exon	438	510	.	+	.	ID=exon-CYJ03_RS12070-1;Parent=rna-CYJ03_RS12070;anticodon=(pos:471..473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12070;product=tRNA-Phe
NZ_PJUP02000050.1	RefSeq	gene	525	597	.	+	.	ID=gene-CYJ03_RS12075;Name=CYJ03_RS12075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12075;old_locus_tag=CYJ03_012065
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	525	597	.	+	.	ID=rna-CYJ03_RS12075;Parent=gene-CYJ03_RS12075;anticodon=(pos:558..560);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12075;product=tRNA-His
NZ_PJUP02000050.1	tRNAscan-SE	exon	525	597	.	+	.	ID=exon-CYJ03_RS12075-1;Parent=rna-CYJ03_RS12075;anticodon=(pos:558..560);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12075;product=tRNA-His
NZ_PJUP02000050.1	RefSeq	gene	617	690	.	+	.	ID=gene-CYJ03_RS12080;Name=CYJ03_RS12080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12080;old_locus_tag=CYJ03_012070
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	617	690	.	+	.	ID=rna-CYJ03_RS12080;Parent=gene-CYJ03_RS12080;anticodon=(pos:649..651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12080;product=tRNA-Gly
NZ_PJUP02000050.1	tRNAscan-SE	exon	617	690	.	+	.	ID=exon-CYJ03_RS12080-1;Parent=rna-CYJ03_RS12080;anticodon=(pos:649..651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12080;product=tRNA-Gly
NZ_PJUP02000050.1	RefSeq	gene	698	772	.	+	.	ID=gene-CYJ03_RS12085;Name=CYJ03_RS12085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12085;old_locus_tag=CYJ03_012075
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	698	772	.	+	.	ID=rna-CYJ03_RS12085;Parent=gene-CYJ03_RS12085;anticodon=(pos:730..732);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12085;product=tRNA-Asn
NZ_PJUP02000050.1	tRNAscan-SE	exon	698	772	.	+	.	ID=exon-CYJ03_RS12085-1;Parent=rna-CYJ03_RS12085;anticodon=(pos:730..732);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12085;product=tRNA-Asn
NZ_PJUP02000050.1	RefSeq	gene	774	845	.	+	.	ID=gene-CYJ03_RS12090;Name=CYJ03_RS12090;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12090;old_locus_tag=CYJ03_012080
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	774	845	.	+	.	ID=rna-CYJ03_RS12090;Parent=gene-CYJ03_RS12090;anticodon=(pos:807..809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12090;product=tRNA-Glu
NZ_PJUP02000050.1	tRNAscan-SE	exon	774	845	.	+	.	ID=exon-CYJ03_RS12090-1;Parent=rna-CYJ03_RS12090;anticodon=(pos:807..809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12090;product=tRNA-Glu
NZ_PJUP02000050.1	RefSeq	gene	895	983	.	+	.	ID=gene-CYJ03_RS12095;Name=CYJ03_RS12095;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12095;old_locus_tag=CYJ03_012085
NZ_PJUP02000050.1	tRNAscan-SE	tRNA	895	983	.	+	.	ID=rna-CYJ03_RS12095;Parent=gene-CYJ03_RS12095;anticodon=(pos:930..932);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12095;product=tRNA-Ser
NZ_PJUP02000050.1	tRNAscan-SE	exon	895	983	.	+	.	ID=exon-CYJ03_RS12095-1;Parent=rna-CYJ03_RS12095;anticodon=(pos:930..932);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12095;product=tRNA-Ser
NZ_PJUP02000050.1	RefSeq	gene	1601	1705	.	+	.	ID=gene-CYJ03_RS12100;Name=CYJ03_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12100;old_locus_tag=CYJ03_012090
NZ_PJUP02000050.1	Protein Homology	CDS	1601	1705	.	+	0	ID=cds-WP_101431332.1;Parent=gene-CYJ03_RS12100;Dbxref=GenBank:WP_101431332.1;Name=WP_101431332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.7;locus_tag=CYJ03_RS12100;product=putative holin-like toxin;protein_id=WP_101431332.1;transl_table=11
NZ_PJUP02000050.1	RefSeq	gene	2080	3474	.	+	.	ID=gene-CYJ03_RS12105;Name=CYJ03_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12105;old_locus_tag=CYJ03_012095
NZ_PJUP02000050.1	Protein Homology	CDS	2080	3474	.	+	0	ID=cds-WP_241900546.1;Parent=gene-CYJ03_RS12105;Dbxref=GenBank:WP_241900546.1;Name=WP_241900546.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219639.1;locus_tag=CYJ03_RS12105;product=minor capsid protein;protein_id=WP_241900546.1;transl_table=11
NZ_PJUP02000050.1	RefSeq	gene	3486	3728	.	+	.	ID=gene-CYJ03_RS12110;Name=CYJ03_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12110;old_locus_tag=CYJ03_012100
NZ_PJUP02000050.1	Protein Homology	CDS	3486	3728	.	+	0	ID=cds-WP_020219638.1;Parent=gene-CYJ03_RS12110;Dbxref=GenBank:WP_020219638.1;Name=WP_020219638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219638.1;locus_tag=CYJ03_RS12110;product=hypothetical protein;protein_id=WP_020219638.1;transl_table=11
NZ_PJUP02000050.1	RefSeq	gene	3913	4497	.	+	.	ID=gene-CYJ03_RS12115;Name=CYJ03_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12115;old_locus_tag=CYJ03_012105
NZ_PJUP02000050.1	Protein Homology	CDS	3913	4497	.	+	0	ID=cds-WP_104039200.1;Parent=gene-CYJ03_RS12115;Dbxref=GenBank:WP_104039200.1;Name=WP_104039200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729353.1;locus_tag=CYJ03_RS12115;product=DUF4355 domain-containing protein;protein_id=WP_104039200.1;transl_table=11
NZ_PJUP02000050.1	RefSeq	gene	4556	5536	.	-	.	ID=gene-CYJ03_RS12120;Name=CYJ03_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12120;old_locus_tag=CYJ03_012110
NZ_PJUP02000050.1	Protein Homology	CDS	4556	5536	.	-	0	ID=cds-WP_014613567.1;Parent=gene-CYJ03_RS12120;Dbxref=GenBank:WP_014613567.1;Name=WP_014613567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613567.1;locus_tag=CYJ03_RS12120;product=leukocidin/hemolysin toxin family protein;protein_id=WP_014613567.1;transl_table=11
NZ_PJUP02000050.1	RefSeq	gene	5538	6470	.	-	.	ID=gene-CYJ03_RS12125;Name=CYJ03_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12125;old_locus_tag=CYJ03_012115
NZ_PJUP02000050.1	Protein Homology	CDS	5538	6470	.	-	0	ID=cds-WP_014613568.1;Parent=gene-CYJ03_RS12125;Dbxref=GenBank:WP_014613568.1;Name=WP_014613568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916699.1;locus_tag=CYJ03_RS12125;product=leukocidin/hemolysin toxin family protein;protein_id=WP_014613568.1;transl_table=11
##sequence-region NZ_PJUP02000051.1 1 6338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000051.1	RefSeq	region	1	6338	.	+	.	ID=NZ_PJUP02000051.1:1..6338;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000051.1	RefSeq	pseudogene	127	411	.	+	.	ID=gene-CYJ03_RS12750;Name=CYJ03_RS12750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12750;old_locus_tag=CYJ03_012120;partial=true;pseudo=true;start_range=.,127
NZ_PJUP02000051.1	Protein Homology	CDS	127	411	.	+	0	ID=cds-CYJ03_RS12750;Parent=gene-CYJ03_RS12750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12750;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,127;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	479	991	.	-	.	ID=gene-CYJ03_RS12135;Name=CYJ03_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12135;old_locus_tag=CYJ03_012125
NZ_PJUP02000051.1	Protein Homology	CDS	479	991	.	-	0	ID=cds-WP_014613557.1;Parent=gene-CYJ03_RS12135;Dbxref=GenBank:WP_014613557.1;Name=WP_014613557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613557.1;locus_tag=CYJ03_RS12135;product=antibiotic biosynthesis monooxygenase;protein_id=WP_014613557.1;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	1303	2337	.	+	.	ID=gene-CYJ03_RS12140;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CYJ03_RS12140;old_locus_tag=CYJ03_012130
NZ_PJUP02000051.1	Protein Homology	CDS	1303	2337	.	+	0	ID=cds-WP_014613558.1;Parent=gene-CYJ03_RS12140;Dbxref=GenBank:WP_014613558.1;Name=WP_014613558.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500461.1;locus_tag=CYJ03_RS12140;product=uroporphyrinogen decarboxylase;protein_id=WP_014613558.1;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	2375	3307	.	+	.	ID=gene-CYJ03_RS12145;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CYJ03_RS12145;old_locus_tag=CYJ03_012135
NZ_PJUP02000051.1	Protein Homology	CDS	2375	3307	.	+	0	ID=cds-WP_014613559.1;Parent=gene-CYJ03_RS12145;Dbxref=GenBank:WP_014613559.1;Name=WP_014613559.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=CYJ03_RS12145;product=ferrochelatase;protein_id=WP_014613559.1;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	3313	4716	.	+	.	ID=gene-CYJ03_RS12150;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CYJ03_RS12150;old_locus_tag=CYJ03_012140
NZ_PJUP02000051.1	Protein Homology	CDS	3313	4716	.	+	0	ID=cds-WP_014613560.1;Parent=gene-CYJ03_RS12150;Dbxref=GenBank:WP_014613560.1;Name=WP_014613560.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=protoporphyrinogen oxidase activity%2C oxygen as acceptor|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164996.1;locus_tag=CYJ03_RS12150;product=protoporphyrinogen oxidase;protein_id=WP_014613560.1;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	4974	5528	.	+	.	ID=gene-CYJ03_RS12155;Name=CYJ03_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12155;old_locus_tag=CYJ03_012145
NZ_PJUP02000051.1	Protein Homology	CDS	4974	5528	.	+	0	ID=cds-WP_015729355.1;Parent=gene-CYJ03_RS12155;Dbxref=GenBank:WP_015729355.1;Name=WP_015729355.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=CYJ03_RS12155;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_015729355.1;transl_table=11
NZ_PJUP02000051.1	RefSeq	gene	5869	5940	.	+	.	ID=gene-CYJ03_RS12160;Name=CYJ03_RS12160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12160;old_locus_tag=CYJ03_012150
NZ_PJUP02000051.1	tRNAscan-SE	tRNA	5869	5940	.	+	.	ID=rna-CYJ03_RS12160;Parent=gene-CYJ03_RS12160;anticodon=(pos:5902..5904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12160;product=tRNA-Glu
NZ_PJUP02000051.1	tRNAscan-SE	exon	5869	5940	.	+	.	ID=exon-CYJ03_RS12160-1;Parent=rna-CYJ03_RS12160;anticodon=(pos:5902..5904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12160;product=tRNA-Glu
NZ_PJUP02000051.1	RefSeq	gene	6051	6124	.	+	.	ID=gene-CYJ03_RS12165;Name=CYJ03_RS12165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12165;old_locus_tag=CYJ03_012155
NZ_PJUP02000051.1	tRNAscan-SE	tRNA	6051	6124	.	+	.	ID=rna-CYJ03_RS12165;Parent=gene-CYJ03_RS12165;anticodon=(pos:6085..6087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12165;product=tRNA-Met
NZ_PJUP02000051.1	tRNAscan-SE	exon	6051	6124	.	+	.	ID=exon-CYJ03_RS12165-1;Parent=rna-CYJ03_RS12165;anticodon=(pos:6085..6087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12165;product=tRNA-Met
NZ_PJUP02000051.1	RefSeq	gene	6136	6209	.	+	.	ID=gene-CYJ03_RS12170;Name=CYJ03_RS12170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS12170;old_locus_tag=CYJ03_012160
NZ_PJUP02000051.1	tRNAscan-SE	tRNA	6136	6209	.	+	.	ID=rna-CYJ03_RS12170;Parent=gene-CYJ03_RS12170;anticodon=(pos:6170..6172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12170;product=tRNA-Asp
NZ_PJUP02000051.1	tRNAscan-SE	exon	6136	6209	.	+	.	ID=exon-CYJ03_RS12170-1;Parent=rna-CYJ03_RS12170;anticodon=(pos:6170..6172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS12170;product=tRNA-Asp
##sequence-region NZ_PJUP02000003.1 1 124622
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000003.1	RefSeq	region	1	124622	.	+	.	ID=NZ_PJUP02000003.1:1..124622;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000003.1	RefSeq	gene	1	1008	.	-	.	ID=gene-CYJ03_RS01555;Name=CYJ03_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01555;old_locus_tag=CYJ03_001550;partial=true;start_range=.,1
NZ_PJUP02000003.1	Protein Homology	CDS	1	1008	.	-	0	ID=cds-WP_104052087.1;Parent=gene-CYJ03_RS01555;Dbxref=GenBank:WP_104052087.1;Name=WP_104052087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=CYJ03_RS01555;partial=true;product=chorismate-binding protein;protein_id=WP_104052087.1;start_range=.,1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	1182	2120	.	+	.	ID=gene-CYJ03_RS01560;Name=CYJ03_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01560;old_locus_tag=CYJ03_001555
NZ_PJUP02000003.1	Protein Homology	CDS	1182	2120	.	+	0	ID=cds-WP_014614320.1;Parent=gene-CYJ03_RS01560;Dbxref=GenBank:WP_014614320.1;Name=WP_014614320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=CYJ03_RS01560;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_014614320.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	2436	3200	.	-	.	ID=gene-CYJ03_RS01565;Name=CYJ03_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01565;old_locus_tag=CYJ03_001560
NZ_PJUP02000003.1	Protein Homology	CDS	2436	3200	.	-	0	ID=cds-WP_015728929.1;Parent=gene-CYJ03_RS01565;Dbxref=GenBank:WP_015728929.1;Name=WP_015728929.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165637.1;locus_tag=CYJ03_RS01565;product=ABC transporter permease;protein_id=WP_015728929.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	3197	3847	.	-	.	ID=gene-CYJ03_RS01570;Name=CYJ03_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01570;old_locus_tag=CYJ03_001565
NZ_PJUP02000003.1	Protein Homology	CDS	3197	3847	.	-	0	ID=cds-WP_104052064.1;Parent=gene-CYJ03_RS01570;Dbxref=GenBank:WP_104052064.1;Name=WP_104052064.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=CYJ03_RS01570;product=ABC transporter ATP-binding protein;protein_id=WP_104052064.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	3840	4415	.	-	.	ID=gene-CYJ03_RS01575;Name=CYJ03_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01575;old_locus_tag=CYJ03_001570
NZ_PJUP02000003.1	Protein Homology	CDS	3840	4415	.	-	0	ID=cds-WP_020220256.1;Parent=gene-CYJ03_RS01575;Dbxref=GenBank:WP_020220256.1;Name=WP_020220256.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=CYJ03_RS01575;product=GNAT family N-acetyltransferase;protein_id=WP_020220256.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	4554	4964	.	+	.	ID=gene-CYJ03_RS01580;Name=CYJ03_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01580;old_locus_tag=CYJ03_001575
NZ_PJUP02000003.1	Protein Homology	CDS	4554	4964	.	+	0	ID=cds-WP_015728927.1;Parent=gene-CYJ03_RS01580;Dbxref=GenBank:WP_015728927.1;Name=WP_015728927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728927.1;locus_tag=CYJ03_RS01580;product=YolD-like family protein;protein_id=WP_015728927.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	5111	5713	.	-	.	ID=gene-CYJ03_RS01585;Name=CYJ03_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01585;old_locus_tag=CYJ03_001580
NZ_PJUP02000003.1	Protein Homology	CDS	5111	5713	.	-	0	ID=cds-WP_104052065.1;Parent=gene-CYJ03_RS01585;Dbxref=GenBank:WP_104052065.1;Name=WP_104052065.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=CYJ03_RS01585;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_104052065.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	5720	5905	.	-	.	ID=gene-CYJ03_RS01590;Name=CYJ03_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01590;old_locus_tag=CYJ03_001585
NZ_PJUP02000003.1	Protein Homology	CDS	5720	5905	.	-	0	ID=cds-WP_014614328.1;Parent=gene-CYJ03_RS01590;Dbxref=GenBank:WP_014614328.1;Name=WP_014614328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=CYJ03_RS01590;product=YkvS family protein;protein_id=WP_014614328.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	6093	7085	.	+	.	ID=gene-CYJ03_RS01595;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=CYJ03_RS01595;old_locus_tag=CYJ03_001590
NZ_PJUP02000003.1	Protein Homology	CDS	6093	7085	.	+	0	ID=cds-WP_037543433.1;Parent=gene-CYJ03_RS01595;Dbxref=GenBank:WP_037543433.1;Name=WP_037543433.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=CYJ03_RS01595;product=lipoate--protein ligase;protein_id=WP_037543433.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	7307	7525	.	-	.	ID=gene-CYJ03_RS01600;Name=CYJ03_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01600;old_locus_tag=CYJ03_001595
NZ_PJUP02000003.1	Protein Homology	CDS	7307	7525	.	-	0	ID=cds-WP_014614330.1;Parent=gene-CYJ03_RS01600;Dbxref=GenBank:WP_014614330.1;Name=WP_014614330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=CYJ03_RS01600;product=IDEAL domain-containing protein;protein_id=WP_014614330.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	7762	8379	.	+	.	ID=gene-CYJ03_RS01605;Name=CYJ03_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01605;old_locus_tag=CYJ03_001600
NZ_PJUP02000003.1	Protein Homology	CDS	7762	8379	.	+	0	ID=cds-WP_015728925.1;Parent=gene-CYJ03_RS01605;Dbxref=GenBank:WP_015728925.1;Name=WP_015728925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614331.1;locus_tag=CYJ03_RS01605;product=competence protein ComK;protein_id=WP_015728925.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	8592	8666	.	+	.	ID=gene-CYJ03_RS01610;Name=CYJ03_RS01610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS01610;old_locus_tag=CYJ03_001605
NZ_PJUP02000003.1	tRNAscan-SE	tRNA	8592	8666	.	+	.	ID=rna-CYJ03_RS01610;Parent=gene-CYJ03_RS01610;anticodon=(pos:8624..8626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS01610;product=tRNA-Asn
NZ_PJUP02000003.1	tRNAscan-SE	exon	8592	8666	.	+	.	ID=exon-CYJ03_RS01610-1;Parent=rna-CYJ03_RS01610;anticodon=(pos:8624..8626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS01610;product=tRNA-Asn
NZ_PJUP02000003.1	RefSeq	gene	8668	8756	.	+	.	ID=gene-CYJ03_RS01615;Name=CYJ03_RS01615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CYJ03_RS01615;old_locus_tag=CYJ03_001610
NZ_PJUP02000003.1	tRNAscan-SE	tRNA	8668	8756	.	+	.	ID=rna-CYJ03_RS01615;Parent=gene-CYJ03_RS01615;anticodon=(pos:8703..8705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS01615;product=tRNA-Ser
NZ_PJUP02000003.1	tRNAscan-SE	exon	8668	8756	.	+	.	ID=exon-CYJ03_RS01615-1;Parent=rna-CYJ03_RS01615;anticodon=(pos:8703..8705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CYJ03_RS01615;product=tRNA-Ser
NZ_PJUP02000003.1	RefSeq	pseudogene	9302	9433	.	-	.	ID=gene-CYJ03_RS12765;Name=CYJ03_RS12765;end_range=9433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12765;partial=true;pseudo=true
NZ_PJUP02000003.1	Protein Homology	CDS	9302	9433	.	-	0	ID=cds-CYJ03_RS12765;Parent=gene-CYJ03_RS12765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9433,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.7;locus_tag=CYJ03_RS12765;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	10158	13784	.	+	.	ID=gene-CYJ03_RS01620;Name=CYJ03_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01620;old_locus_tag=CYJ03_001615
NZ_PJUP02000003.1	Protein Homology	CDS	10158	13784	.	+	0	ID=cds-WP_104052066.1;Parent=gene-CYJ03_RS01620;Dbxref=GenBank:WP_104052066.1;Name=WP_104052066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728923.1;locus_tag=CYJ03_RS01620;product=SdrD B-like domain-containing protein;protein_id=WP_104052066.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	13880	15394	.	-	.	ID=gene-CYJ03_RS01625;Name=CYJ03_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01625;old_locus_tag=CYJ03_001620
NZ_PJUP02000003.1	Protein Homology	CDS	13880	15394	.	-	0	ID=cds-WP_104052067.1;Parent=gene-CYJ03_RS01625;Dbxref=GenBank:WP_104052067.1;Name=WP_104052067.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614334.1;locus_tag=CYJ03_RS01625;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_104052067.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	15747	15875	.	+	.	ID=gene-CYJ03_RS01630;Name=CYJ03_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01630;old_locus_tag=CYJ03_001625
NZ_PJUP02000003.1	Protein Homology	CDS	15747	15875	.	+	0	ID=cds-WP_014614335.1;Parent=gene-CYJ03_RS01630;Dbxref=GenBank:WP_014614335.1;Name=WP_014614335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=CYJ03_RS01630;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_014614335.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	15895	17349	.	+	.	ID=gene-CYJ03_RS01635;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01635;old_locus_tag=CYJ03_001630
NZ_PJUP02000003.1	Protein Homology	CDS	15895	17349	.	+	0	ID=cds-WP_015728921.1;Parent=gene-CYJ03_RS01635;Dbxref=GenBank:WP_015728921.1;Name=WP_015728921.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614336.1;locus_tag=CYJ03_RS01635;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_015728921.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	17346	18563	.	+	.	ID=gene-CYJ03_RS01640;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01640;old_locus_tag=CYJ03_001635
NZ_PJUP02000003.1	Protein Homology	CDS	17346	18563	.	+	0	ID=cds-WP_037543462.1;Parent=gene-CYJ03_RS01640;Dbxref=GenBank:WP_037543462.1;Name=WP_037543462.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=CYJ03_RS01640;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_037543462.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	18576	18812	.	+	.	ID=gene-CYJ03_RS01645;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CYJ03_RS01645;old_locus_tag=CYJ03_001640
NZ_PJUP02000003.1	Protein Homology	CDS	18576	18812	.	+	0	ID=cds-WP_014614338.1;Parent=gene-CYJ03_RS01645;Dbxref=GenBank:WP_014614338.1;Name=WP_014614338.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CYJ03_RS01645;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_014614338.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	18809	19951	.	+	.	ID=gene-CYJ03_RS01650;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CYJ03_RS01650;old_locus_tag=CYJ03_001645
NZ_PJUP02000003.1	Protein Homology	CDS	18809	19951	.	+	0	ID=cds-WP_014614339.1;Parent=gene-CYJ03_RS01650;Dbxref=GenBank:WP_014614339.1;Name=WP_014614339.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614339.1;locus_tag=CYJ03_RS01650;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_014614339.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	20538	21896	.	-	.	ID=gene-CYJ03_RS01655;Name=CYJ03_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01655;old_locus_tag=CYJ03_001650
NZ_PJUP02000003.1	Protein Homology	CDS	20538	21896	.	-	0	ID=cds-WP_037543467.1;Parent=gene-CYJ03_RS01655;Dbxref=GenBank:WP_037543467.1;Name=WP_037543467.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488327.1;locus_tag=CYJ03_RS01655;product=TrkH family potassium uptake protein;protein_id=WP_037543467.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	21913	23565	.	-	.	ID=gene-CYJ03_RS01660;Name=CYJ03_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01660;old_locus_tag=CYJ03_001655
NZ_PJUP02000003.1	Protein Homology	CDS	21913	23565	.	-	0	ID=cds-WP_104052068.1;Parent=gene-CYJ03_RS01660;Dbxref=GenBank:WP_104052068.1;Name=WP_104052068.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=CYJ03_RS01660;product=S1C family serine protease;protein_id=WP_104052068.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	23876	24685	.	-	.	ID=gene-CYJ03_RS01665;Name=CYJ03_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01665;old_locus_tag=CYJ03_001660
NZ_PJUP02000003.1	Protein Homology	CDS	23876	24685	.	-	0	ID=cds-WP_172426197.1;Parent=gene-CYJ03_RS01665;Dbxref=GenBank:WP_172426197.1;Name=WP_172426197.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614342.1;locus_tag=CYJ03_RS01665;product=MeeY/MeeF family manganese export membrane protein;protein_id=WP_172426197.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	25148	26710	.	-	.	ID=gene-CYJ03_RS01670;Name=CYJ03_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01670;old_locus_tag=CYJ03_001665
NZ_PJUP02000003.1	Protein Homology	CDS	25148	26710	.	-	0	ID=cds-WP_015728913.1;Parent=gene-CYJ03_RS01670;Dbxref=GenBank:WP_015728913.1;Name=WP_015728913.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=CYJ03_RS01670;product=peptide chain release factor 3;protein_id=WP_015728913.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	26731	26970	.	-	.	ID=gene-CYJ03_RS01675;Name=CYJ03_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01675;old_locus_tag=CYJ03_001670
NZ_PJUP02000003.1	Protein Homology	CDS	26731	26970	.	-	0	ID=cds-WP_014614344.1;Parent=gene-CYJ03_RS01675;Dbxref=GenBank:WP_014614344.1;Name=WP_014614344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=CYJ03_RS01675;product=YueH family protein;protein_id=WP_014614344.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	26960	28444	.	-	.	ID=gene-CYJ03_RS01680;Name=CYJ03_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01680;old_locus_tag=CYJ03_001675
NZ_PJUP02000003.1	Protein Homology	CDS	26960	28444	.	-	0	ID=cds-WP_104052069.1;Parent=gene-CYJ03_RS01680;Dbxref=GenBank:WP_104052069.1;Name=WP_104052069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=CYJ03_RS01680;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_104052069.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	29115	30290	.	+	.	ID=gene-CYJ03_RS01685;Name=CYJ03_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01685;old_locus_tag=CYJ03_001680
NZ_PJUP02000003.1	Protein Homology	CDS	29115	30290	.	+	0	ID=cds-WP_104052070.1;Parent=gene-CYJ03_RS01685;Dbxref=GenBank:WP_104052070.1;Name=WP_104052070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167265.1;locus_tag=CYJ03_RS01685;product=diglucosyl diacylglycerol synthase;protein_id=WP_104052070.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	30268	31452	.	+	.	ID=gene-CYJ03_RS01690;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01690;old_locus_tag=CYJ03_001685
NZ_PJUP02000003.1	Protein Homology	CDS	30268	31452	.	+	0	ID=cds-WP_031253928.1;Parent=gene-CYJ03_RS01690;Dbxref=GenBank:WP_031253928.1;Name=WP_031253928.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614347.1;locus_tag=CYJ03_RS01690;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_031253928.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	31858	33345	.	+	.	ID=gene-CYJ03_RS01695;Name=CYJ03_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01695;old_locus_tag=CYJ03_001690
NZ_PJUP02000003.1	Protein Homology	CDS	31858	33345	.	+	0	ID=cds-WP_104052071.1;Parent=gene-CYJ03_RS01695;Dbxref=GenBank:WP_104052071.1;Name=WP_104052071.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165969.1;locus_tag=CYJ03_RS01695;product=arylsulfatase;protein_id=WP_104052071.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	33450	34346	.	+	.	ID=gene-CYJ03_RS01700;Name=CYJ03_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01700;old_locus_tag=CYJ03_001695
NZ_PJUP02000003.1	Protein Homology	CDS	33450	34346	.	+	0	ID=cds-WP_015728906.1;Parent=gene-CYJ03_RS01700;Dbxref=GenBank:WP_015728906.1;Name=WP_015728906.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168844.1;locus_tag=CYJ03_RS01700;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_015728906.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	34333	35226	.	+	.	ID=gene-CYJ03_RS01705;Name=CYJ03_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01705;old_locus_tag=CYJ03_001700
NZ_PJUP02000003.1	Protein Homology	CDS	34333	35226	.	+	0	ID=cds-WP_037543485.1;Parent=gene-CYJ03_RS01705;Dbxref=GenBank:WP_037543485.1;Name=WP_037543485.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165971.1;locus_tag=CYJ03_RS01705;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_037543485.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	35798	36304	.	-	.	ID=gene-CYJ03_RS01710;Name=CYJ03_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01710;old_locus_tag=CYJ03_001705
NZ_PJUP02000003.1	Protein Homology	CDS	35798	36304	.	-	0	ID=cds-WP_063279083.1;Parent=gene-CYJ03_RS01710;Dbxref=GenBank:WP_063279083.1;Name=WP_063279083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728896.1;locus_tag=CYJ03_RS01710;product=2'-5' RNA ligase family protein;protein_id=WP_063279083.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	36358	37092	.	-	.	ID=gene-CYJ03_RS01715;Name=CYJ03_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01715;old_locus_tag=CYJ03_001710
NZ_PJUP02000003.1	Protein Homology	CDS	36358	37092	.	-	0	ID=cds-WP_014614352.1;Parent=gene-CYJ03_RS01715;Dbxref=GenBank:WP_014614352.1;Name=WP_014614352.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728895.1;locus_tag=CYJ03_RS01715;product=esterase family protein;protein_id=WP_014614352.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	37195	38766	.	-	.	ID=gene-CYJ03_RS01720;Name=CYJ03_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01720;old_locus_tag=CYJ03_001715
NZ_PJUP02000003.1	Protein Homology	CDS	37195	38766	.	-	0	ID=cds-WP_063284623.1;Parent=gene-CYJ03_RS01720;Dbxref=GenBank:WP_063284623.1;Name=WP_063284623.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165974.1;locus_tag=CYJ03_RS01720;product=alanine/glycine:cation symporter family protein;protein_id=WP_063284623.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	38984	40081	.	+	.	ID=gene-CYJ03_RS01725;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=CYJ03_RS01725;old_locus_tag=CYJ03_001720
NZ_PJUP02000003.1	Protein Homology	CDS	38984	40081	.	+	0	ID=cds-WP_014614354.1;Parent=gene-CYJ03_RS01725;Dbxref=GenBank:WP_014614354.1;Name=WP_014614354.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=CYJ03_RS01725;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_014614354.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	40373	41143	.	-	.	ID=gene-CYJ03_RS01730;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CYJ03_RS01730;old_locus_tag=CYJ03_001725
NZ_PJUP02000003.1	Protein Homology	CDS	40373	41143	.	-	0	ID=cds-WP_037543489.1;Parent=gene-CYJ03_RS01730;Dbxref=GenBank:WP_037543489.1;Name=WP_037543489.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=CYJ03_RS01730;product=enoyl-ACP reductase FabI;protein_id=WP_037543489.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	41290	43125	.	-	.	ID=gene-CYJ03_RS01735;Name=CYJ03_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01735;old_locus_tag=CYJ03_001730
NZ_PJUP02000003.1	Protein Homology	CDS	41290	43125	.	-	0	ID=cds-WP_104052072.1;Parent=gene-CYJ03_RS01735;Dbxref=GenBank:WP_104052072.1;Name=WP_104052072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165977.1;locus_tag=CYJ03_RS01735;product=monovalent cation:proton antiporter family protein;protein_id=WP_104052072.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	43136	44479	.	-	.	ID=gene-CYJ03_RS01740;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CYJ03_RS01740;old_locus_tag=CYJ03_001735
NZ_PJUP02000003.1	Protein Homology	CDS	43136	44479	.	-	0	ID=cds-WP_373408314.1;Parent=gene-CYJ03_RS01740;Dbxref=GenBank:WP_373408314.1;Name=WP_373408314.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165978.1;locus_tag=CYJ03_RS01740;product=magnesium transporter;protein_id=WP_373408314.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	44550	45404	.	-	.	ID=gene-CYJ03_RS01745;Name=CYJ03_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01745;old_locus_tag=CYJ03_001740
NZ_PJUP02000003.1	Protein Homology	CDS	44550	45404	.	-	0	ID=cds-WP_101457421.1;Parent=gene-CYJ03_RS01745;Dbxref=GenBank:WP_101457421.1;Name=WP_101457421.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=CYJ03_RS01745;product=RluA family pseudouridine synthase;protein_id=WP_101457421.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	45401	46210	.	-	.	ID=gene-CYJ03_RS01750;Name=CYJ03_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01750;old_locus_tag=CYJ03_001745
NZ_PJUP02000003.1	Protein Homology	CDS	45401	46210	.	-	0	ID=cds-WP_014614362.1;Parent=gene-CYJ03_RS01750;Dbxref=GenBank:WP_014614362.1;Name=WP_014614362.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=CYJ03_RS01750;product=NAD kinase;protein_id=WP_014614362.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	46222	46860	.	-	.	ID=gene-CYJ03_RS01755;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=CYJ03_RS01755;old_locus_tag=CYJ03_001750
NZ_PJUP02000003.1	Protein Homology	CDS	46222	46860	.	-	0	ID=cds-WP_014614363.1;Parent=gene-CYJ03_RS01755;Dbxref=GenBank:WP_014614363.1;Name=WP_014614363.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614363.1;locus_tag=CYJ03_RS01755;product=GTP diphosphokinase;protein_id=WP_014614363.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	46877	47224	.	-	.	ID=gene-CYJ03_RS01760;Name=CYJ03_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01760;old_locus_tag=CYJ03_001755
NZ_PJUP02000003.1	Protein Homology	CDS	46877	47224	.	-	0	ID=cds-WP_014614364.1;Parent=gene-CYJ03_RS01760;Dbxref=GenBank:WP_014614364.1;Name=WP_014614364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276223.1;locus_tag=CYJ03_RS01760;product=UPF0738 family protein;protein_id=WP_014614364.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	47355	47936	.	+	.	ID=gene-CYJ03_RS01765;Name=CYJ03_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01765;old_locus_tag=CYJ03_001760
NZ_PJUP02000003.1	Protein Homology	CDS	47355	47936	.	+	0	ID=cds-WP_015728889.1;Parent=gene-CYJ03_RS01765;Dbxref=GenBank:WP_015728889.1;Name=WP_015728889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728889.1;locus_tag=CYJ03_RS01765;product=CYTH domain-containing protein;protein_id=WP_015728889.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	48284	48655	.	+	.	ID=gene-CYJ03_RS01770;Name=CYJ03_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01770;old_locus_tag=CYJ03_001765
NZ_PJUP02000003.1	Protein Homology	CDS	48284	48655	.	+	0	ID=cds-WP_015728888.1;Parent=gene-CYJ03_RS01770;Dbxref=GenBank:WP_015728888.1;Name=WP_015728888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167281.1;locus_tag=CYJ03_RS01770;product=truncated hemoglobin YjbI;protein_id=WP_015728888.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	48672	49460	.	+	.	ID=gene-CYJ03_RS01775;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=CYJ03_RS01775;old_locus_tag=CYJ03_001770
NZ_PJUP02000003.1	Protein Homology	CDS	48672	49460	.	+	0	ID=cds-WP_014614367.1;Parent=gene-CYJ03_RS01775;Dbxref=GenBank:WP_014614367.1;Name=WP_014614367.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=CYJ03_RS01775;product=protease adaptor protein YjbH;protein_id=WP_014614367.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	49708	50436	.	-	.	ID=gene-CYJ03_RS01780;Name=CYJ03_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01780;old_locus_tag=CYJ03_001775
NZ_PJUP02000003.1	Protein Homology	CDS	49708	50436	.	-	0	ID=cds-WP_015728887.1;Parent=gene-CYJ03_RS01780;Dbxref=GenBank:WP_015728887.1;Name=WP_015728887.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728887.1;locus_tag=CYJ03_RS01780;product=M48 family metallopeptidase;protein_id=WP_015728887.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	51133	52941	.	-	.	ID=gene-CYJ03_RS01785;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CYJ03_RS01785;old_locus_tag=CYJ03_001780
NZ_PJUP02000003.1	Protein Homology	CDS	51133	52941	.	-	0	ID=cds-WP_015728886.1;Parent=gene-CYJ03_RS01785;Dbxref=GenBank:WP_015728886.1;Name=WP_015728886.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=CYJ03_RS01785;product=oligoendopeptidase F;protein_id=WP_015728886.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	53015	53980	.	-	.	ID=gene-CYJ03_RS01790;Name=CYJ03_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01790;old_locus_tag=CYJ03_001785
NZ_PJUP02000003.1	Protein Homology	CDS	53015	53980	.	-	0	ID=cds-WP_101457979.1;Parent=gene-CYJ03_RS01790;Dbxref=GenBank:WP_101457979.1;Name=WP_101457979.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728885.1;locus_tag=CYJ03_RS01790;product=competence protein CoiA;protein_id=WP_101457979.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	54254	54913	.	-	.	ID=gene-CYJ03_RS01795;Name=spsR;gbkey=Gene;gene=spsR;gene_biotype=protein_coding;locus_tag=CYJ03_RS01795;old_locus_tag=CYJ03_001790
NZ_PJUP02000003.1	Protein Homology	CDS	54254	54913	.	-	0	ID=cds-WP_101457577.1;Parent=gene-CYJ03_RS01795;Dbxref=GenBank:WP_101457577.1;Name=WP_101457577.1;gbkey=CDS;gene=spsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614371.1;locus_tag=CYJ03_RS01795;product=LPXTG-anchored surface protein SpsR;protein_id=WP_101457577.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	54932	56068	.	-	.	ID=gene-CYJ03_RS01800;Name=CYJ03_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01800;old_locus_tag=CYJ03_001795
NZ_PJUP02000003.1	Protein Homology	CDS	54932	56068	.	-	0	ID=cds-WP_258058093.1;Parent=gene-CYJ03_RS01800;Dbxref=GenBank:WP_258058093.1;Name=WP_258058093.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167446.1;locus_tag=CYJ03_RS01800;product=trypsin-like serine peptidase;protein_id=WP_258058093.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	56612	57310	.	-	.	ID=gene-CYJ03_RS01805;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01805;old_locus_tag=CYJ03_001800
NZ_PJUP02000003.1	Protein Homology	CDS	56612	57310	.	-	0	ID=cds-WP_014614373.1;Parent=gene-CYJ03_RS01805;Dbxref=GenBank:WP_014614373.1;Name=WP_014614373.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165987.1;locus_tag=CYJ03_RS01805;product=adaptor protein MecA;protein_id=WP_014614373.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	57644	58039	.	-	.	ID=gene-CYJ03_RS01810;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01810;old_locus_tag=CYJ03_001805
NZ_PJUP02000003.1	Protein Homology	CDS	57644	58039	.	-	0	ID=cds-WP_014614374.1;Parent=gene-CYJ03_RS01810;Dbxref=GenBank:WP_014614374.1;Name=WP_014614374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=CYJ03_RS01810;product=transcriptional regulator SpxA;protein_id=WP_014614374.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	58351	59340	.	+	.	ID=gene-CYJ03_RS01815;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CYJ03_RS01815;old_locus_tag=CYJ03_001810
NZ_PJUP02000003.1	Protein Homology	CDS	58351	59340	.	+	0	ID=cds-WP_104052073.1;Parent=gene-CYJ03_RS01815;Dbxref=GenBank:WP_104052073.1;Name=WP_104052073.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=CYJ03_RS01815;product=tryptophan--tRNA ligase;protein_id=WP_104052073.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	59953	61617	.	-	.	ID=gene-CYJ03_RS01820;Name=CYJ03_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01820;old_locus_tag=CYJ03_001815
NZ_PJUP02000003.1	Protein Homology	CDS	59953	61617	.	-	0	ID=cds-WP_104052074.1;Parent=gene-CYJ03_RS01820;Dbxref=GenBank:WP_104052074.1;Name=WP_104052074.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=CYJ03_RS01820;product=peptide ABC transporter substrate-binding protein;protein_id=WP_104052074.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	61640	62581	.	-	.	ID=gene-CYJ03_RS01825;Name=CYJ03_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01825;old_locus_tag=CYJ03_001820
NZ_PJUP02000003.1	Protein Homology	CDS	61640	62581	.	-	0	ID=cds-WP_037543504.1;Parent=gene-CYJ03_RS01825;Dbxref=GenBank:WP_037543504.1;Name=WP_037543504.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614377.1;locus_tag=CYJ03_RS01825;product=ABC transporter ATP-binding protein;protein_id=WP_037543504.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	62574	63653	.	-	.	ID=gene-CYJ03_RS01830;Name=CYJ03_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01830;old_locus_tag=CYJ03_001825
NZ_PJUP02000003.1	Protein Homology	CDS	62574	63653	.	-	0	ID=cds-WP_014614378.1;Parent=gene-CYJ03_RS01830;Dbxref=GenBank:WP_014614378.1;Name=WP_014614378.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614378.1;locus_tag=CYJ03_RS01830;product=ABC transporter ATP-binding protein;protein_id=WP_014614378.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	63668	64729	.	-	.	ID=gene-CYJ03_RS01835;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=CYJ03_RS01835;old_locus_tag=CYJ03_001830
NZ_PJUP02000003.1	Protein Homology	CDS	63668	64729	.	-	0	ID=cds-WP_020220060.1;Parent=gene-CYJ03_RS01835;Dbxref=GenBank:WP_020220060.1;Name=WP_020220060.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=CYJ03_RS01835;product=oligopeptide ABC transporter permease;protein_id=WP_020220060.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	64729	65655	.	-	.	ID=gene-CYJ03_RS01840;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=CYJ03_RS01840;old_locus_tag=CYJ03_001835
NZ_PJUP02000003.1	Protein Homology	CDS	64729	65655	.	-	0	ID=cds-WP_014614380.1;Parent=gene-CYJ03_RS01840;Dbxref=GenBank:WP_014614380.1;Name=WP_014614380.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CYJ03_RS01840;product=oligopeptide ABC transporter permease;protein_id=WP_014614380.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	65901	66278	.	+	.	ID=gene-CYJ03_RS01845;Name=CYJ03_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01845;old_locus_tag=CYJ03_001840
NZ_PJUP02000003.1	Protein Homology	CDS	65901	66278	.	+	0	ID=cds-WP_014614381.1;Parent=gene-CYJ03_RS01845;Dbxref=GenBank:WP_014614381.1;Name=WP_014614381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614381.1;locus_tag=CYJ03_RS01845;product=DUF3899 domain-containing protein;protein_id=WP_014614381.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	66756	68000	.	-	.	ID=gene-CYJ03_RS01850;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CYJ03_RS01850;old_locus_tag=CYJ03_001845
NZ_PJUP02000003.1	Protein Homology	CDS	66756	68000	.	-	0	ID=cds-WP_015728877.1;Parent=gene-CYJ03_RS01850;Dbxref=GenBank:WP_015728877.1;Name=WP_015728877.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=CYJ03_RS01850;product=beta-ketoacyl-ACP synthase II;protein_id=WP_015728877.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	68019	68960	.	-	.	ID=gene-CYJ03_RS01855;Name=CYJ03_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01855;old_locus_tag=CYJ03_001850
NZ_PJUP02000003.1	Protein Homology	CDS	68019	68960	.	-	0	ID=cds-WP_065520621.1;Parent=gene-CYJ03_RS01855;Dbxref=GenBank:WP_065520621.1;Name=WP_065520621.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CYJ03_RS01855;product=beta-ketoacyl-ACP synthase III;protein_id=WP_065520621.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	69110	69307	.	+	.	ID=gene-CYJ03_RS01860;Name=CYJ03_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01860;old_locus_tag=CYJ03_001855
NZ_PJUP02000003.1	Protein Homology	CDS	69110	69307	.	+	0	ID=cds-WP_014614384.1;Parent=gene-CYJ03_RS01860;Dbxref=GenBank:WP_014614384.1;Name=WP_014614384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614384.1;locus_tag=CYJ03_RS01860;product=DUF2929 family protein;protein_id=WP_014614384.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	69458	70363	.	-	.	ID=gene-CYJ03_RS01865;Name=CYJ03_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01865;old_locus_tag=CYJ03_001860
NZ_PJUP02000003.1	Protein Homology	CDS	69458	70363	.	-	0	ID=cds-WP_104052075.1;Parent=gene-CYJ03_RS01865;Dbxref=GenBank:WP_104052075.1;Name=WP_104052075.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614385.1;locus_tag=CYJ03_RS01865;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_104052075.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	70731	73352	.	-	.	ID=gene-CYJ03_RS01870;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01870;old_locus_tag=CYJ03_001865
NZ_PJUP02000003.1	Protein Homology	CDS	70731	73352	.	-	0	ID=cds-WP_014614386.1;Parent=gene-CYJ03_RS01870;Dbxref=GenBank:WP_014614386.1;Name=WP_014614386.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166000.1;locus_tag=CYJ03_RS01870;product=ATP-dependent chaperone ClpB;protein_id=WP_014614386.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	pseudogene	73630	73776	.	+	.	ID=gene-CYJ03_RS12770;Name=CYJ03_RS12770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12770;partial=true;pseudo=true;start_range=.,73630
NZ_PJUP02000003.1	Protein Homology	CDS	73630	73776	.	+	0	ID=cds-CYJ03_RS12770;Parent=gene-CYJ03_RS12770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ03_RS12770;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,73630;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	73958	75802	.	-	.	ID=gene-CYJ03_RS01875;Name=CYJ03_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01875;old_locus_tag=CYJ03_001870
NZ_PJUP02000003.1	Protein Homology	CDS	73958	75802	.	-	0	ID=cds-WP_014614388.1;Parent=gene-CYJ03_RS01875;Dbxref=GenBank:WP_014614388.1;Name=WP_014614388.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614388.1;locus_tag=CYJ03_RS01875;product=acyltransferase family protein;protein_id=WP_014614388.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	76072	76380	.	-	.	ID=gene-CYJ03_RS01880;Name=CYJ03_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01880;old_locus_tag=CYJ03_001875
NZ_PJUP02000003.1	Protein Homology	CDS	76072	76380	.	-	0	ID=cds-WP_014614389.1;Parent=gene-CYJ03_RS01880;Dbxref=GenBank:WP_014614389.1;Name=WP_014614389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=CYJ03_RS01880;product=metal-sulfur cluster assembly factor;protein_id=WP_014614389.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	76494	77318	.	+	.	ID=gene-CYJ03_RS01885;Name=CYJ03_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01885;old_locus_tag=CYJ03_001880
NZ_PJUP02000003.1	Protein Homology	CDS	76494	77318	.	+	0	ID=cds-WP_014614390.1;Parent=gene-CYJ03_RS01885;Dbxref=GenBank:WP_014614390.1;Name=WP_014614390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614390.1;locus_tag=CYJ03_RS01885;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014614390.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	77349	78674	.	+	.	ID=gene-CYJ03_RS01890;Name=CYJ03_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01890;old_locus_tag=CYJ03_001885
NZ_PJUP02000003.1	Protein Homology	CDS	77349	78674	.	+	0	ID=cds-WP_014614391.1;Parent=gene-CYJ03_RS01890;Dbxref=GenBank:WP_014614391.1;Name=WP_014614391.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=CYJ03_RS01890;product=CoA-disulfide reductase;protein_id=WP_014614391.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	78777	79166	.	-	.	ID=gene-CYJ03_RS01895;Name=CYJ03_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01895;old_locus_tag=CYJ03_001890
NZ_PJUP02000003.1	Protein Homology	CDS	78777	79166	.	-	0	ID=cds-WP_104052076.1;Parent=gene-CYJ03_RS01895;Dbxref=GenBank:WP_104052076.1;Name=WP_104052076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=CYJ03_RS01895;product=YisL family protein;protein_id=WP_104052076.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	79502	80407	.	-	.	ID=gene-CYJ03_RS01900;Name=CYJ03_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01900;old_locus_tag=CYJ03_001895
NZ_PJUP02000003.1	Protein Homology	CDS	79502	80407	.	-	0	ID=cds-WP_014614394.1;Parent=gene-CYJ03_RS01900;Dbxref=GenBank:WP_014614394.1;Name=WP_014614394.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220049.1;locus_tag=CYJ03_RS01900;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014614394.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	80490	84134	.	-	.	ID=gene-CYJ03_RS01905;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01905;old_locus_tag=CYJ03_001900
NZ_PJUP02000003.1	Protein Homology	CDS	80490	84134	.	-	0	ID=cds-WP_063279076.1;Parent=gene-CYJ03_RS01905;Dbxref=GenBank:WP_063279076.1;Name=WP_063279076.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168273.1;locus_tag=CYJ03_RS01905;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_063279076.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	84131	87595	.	-	.	ID=gene-CYJ03_RS01910;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01910;old_locus_tag=CYJ03_001905
NZ_PJUP02000003.1	Protein Homology	CDS	84131	87595	.	-	0	ID=cds-WP_104052077.1;Parent=gene-CYJ03_RS01910;Dbxref=GenBank:WP_104052077.1;Name=WP_104052077.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=CYJ03_RS01910;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_104052077.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	87814	88392	.	-	.	ID=gene-CYJ03_RS01915;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01915;old_locus_tag=CYJ03_001910
NZ_PJUP02000003.1	Protein Homology	CDS	87814	88392	.	-	0	ID=cds-WP_014614397.1;Parent=gene-CYJ03_RS01915;Dbxref=GenBank:WP_014614397.1;Name=WP_014614397.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168275.1;locus_tag=CYJ03_RS01915;product=signal peptidase I;protein_id=WP_014614397.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	88411	88911	.	-	.	ID=gene-CYJ03_RS01920;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01920;old_locus_tag=CYJ03_001915
NZ_PJUP02000003.1	Protein Homology	CDS	88411	88911	.	-	0	ID=cds-WP_065354442.1;Parent=gene-CYJ03_RS01920;Dbxref=GenBank:WP_065354442.1;Name=WP_065354442.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424627.1;locus_tag=CYJ03_RS01920;product=signal peptidase I;protein_id=WP_065354442.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	89173	90504	.	-	.	ID=gene-CYJ03_RS01925;Name=CYJ03_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01925;old_locus_tag=CYJ03_001920
NZ_PJUP02000003.1	Protein Homology	CDS	89173	90504	.	-	0	ID=cds-WP_014614399.1;Parent=gene-CYJ03_RS01925;Dbxref=GenBank:WP_014614399.1;Name=WP_014614399.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CYJ03_RS01925;product=glucose-6-phosphate isomerase;protein_id=WP_014614399.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	90697	91899	.	+	.	ID=gene-CYJ03_RS01930;Name=CYJ03_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01930;old_locus_tag=CYJ03_001925
NZ_PJUP02000003.1	Protein Homology	CDS	90697	91899	.	+	0	ID=cds-WP_014614400.1;Parent=gene-CYJ03_RS01930;Dbxref=GenBank:WP_014614400.1;Name=WP_014614400.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614400.1;locus_tag=CYJ03_RS01930;product=argininosuccinate synthase;protein_id=WP_014614400.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	91892	93283	.	+	.	ID=gene-CYJ03_RS01935;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CYJ03_RS01935;old_locus_tag=CYJ03_001930
NZ_PJUP02000003.1	Protein Homology	CDS	91892	93283	.	+	0	ID=cds-WP_104052078.1;Parent=gene-CYJ03_RS01935;Dbxref=GenBank:WP_104052078.1;Name=WP_104052078.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220051.1;locus_tag=CYJ03_RS01935;product=argininosuccinate lyase;protein_id=WP_104052078.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	93521	94456	.	+	.	ID=gene-CYJ03_RS01940;Name=CYJ03_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01940;old_locus_tag=CYJ03_001935
NZ_PJUP02000003.1	Protein Homology	CDS	93521	94456	.	+	0	ID=cds-WP_104052079.1;Parent=gene-CYJ03_RS01940;Dbxref=GenBank:WP_104052079.1;Name=WP_104052079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220052.1;locus_tag=CYJ03_RS01940;product=glycerophosphodiester phosphodiesterase;protein_id=WP_104052079.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	94759	96003	.	-	.	ID=gene-CYJ03_RS01945;Name=CYJ03_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01945;old_locus_tag=CYJ03_001940
NZ_PJUP02000003.1	Protein Homology	CDS	94759	96003	.	-	0	ID=cds-WP_014614403.1;Parent=gene-CYJ03_RS01945;Dbxref=GenBank:WP_014614403.1;Name=WP_014614403.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499448.1;locus_tag=CYJ03_RS01945;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_014614403.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	96111	97310	.	-	.	ID=gene-CYJ03_RS01950;Name=CYJ03_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01950;old_locus_tag=CYJ03_001945
NZ_PJUP02000003.1	Protein Homology	CDS	96111	97310	.	-	0	ID=cds-WP_063284612.1;Parent=gene-CYJ03_RS01950;Dbxref=GenBank:WP_063284612.1;Name=WP_063284612.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728871.1;locus_tag=CYJ03_RS01950;product=ornithine--oxo-acid transaminase;protein_id=WP_063284612.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	97486	99030	.	-	.	ID=gene-CYJ03_RS01955;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01955;old_locus_tag=CYJ03_001950
NZ_PJUP02000003.1	Protein Homology	CDS	97486	99030	.	-	0	ID=cds-WP_104052080.1;Parent=gene-CYJ03_RS01955;Dbxref=GenBank:WP_104052080.1;Name=WP_104052080.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=CYJ03_RS01955;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_104052080.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	99440	99829	.	+	.	ID=gene-CYJ03_RS01960;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=CYJ03_RS01960;old_locus_tag=CYJ03_001955
NZ_PJUP02000003.1	Protein Homology	CDS	99440	99829	.	+	0	ID=cds-WP_014614406.1;Parent=gene-CYJ03_RS01960;Dbxref=GenBank:WP_014614406.1;Name=WP_014614406.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=CYJ03_RS01960;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_014614406.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	100263	100508	.	-	.	ID=gene-CYJ03_RS01965;Name=CYJ03_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01965;old_locus_tag=CYJ03_001960
NZ_PJUP02000003.1	Protein Homology	CDS	100263	100508	.	-	0	ID=cds-WP_014614407.1;Parent=gene-CYJ03_RS01965;Dbxref=GenBank:WP_014614407.1;Name=WP_014614407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614407.1;locus_tag=CYJ03_RS01965;product=hypothetical protein;protein_id=WP_014614407.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	101143	101343	.	+	.	ID=gene-CYJ03_RS01970;Name=CYJ03_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01970;old_locus_tag=CYJ03_001965
NZ_PJUP02000003.1	Protein Homology	CDS	101143	101343	.	+	0	ID=cds-WP_014614408.1;Parent=gene-CYJ03_RS01970;Dbxref=GenBank:WP_014614408.1;Name=WP_014614408.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=CYJ03_RS01970;product=cold-shock protein;protein_id=WP_014614408.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	101414	101680	.	-	.	ID=gene-CYJ03_RS01975;Name=CYJ03_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01975;old_locus_tag=CYJ03_001970
NZ_PJUP02000003.1	Protein Homology	CDS	101414	101680	.	-	0	ID=cds-WP_104052081.1;Parent=gene-CYJ03_RS01975;Dbxref=GenBank:WP_104052081.1;Name=WP_104052081.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=CYJ03_RS01975;product=FmdB family zinc ribbon protein;protein_id=WP_104052081.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	101680	102870	.	-	.	ID=gene-CYJ03_RS01980;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01980;old_locus_tag=CYJ03_001975
NZ_PJUP02000003.1	Protein Homology	CDS	101680	102870	.	-	0	ID=cds-WP_104052082.1;Parent=gene-CYJ03_RS01980;Dbxref=GenBank:WP_104052082.1;Name=WP_104052082.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614410.1;locus_tag=CYJ03_RS01980;product=formamidase;protein_id=WP_104052082.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	103052	103312	.	-	.	ID=gene-CYJ03_RS01985;Name=CYJ03_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01985;old_locus_tag=CYJ03_001980
NZ_PJUP02000003.1	Protein Homology	CDS	103052	103312	.	-	0	ID=cds-WP_014614411.1;Parent=gene-CYJ03_RS01985;Dbxref=GenBank:WP_014614411.1;Name=WP_014614411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=CYJ03_RS01985;product=DUF1871 family protein;protein_id=WP_014614411.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	103334	103927	.	-	.	ID=gene-CYJ03_RS01990;Name=CYJ03_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01990;old_locus_tag=CYJ03_001985
NZ_PJUP02000003.1	Protein Homology	CDS	103334	103927	.	-	0	ID=cds-WP_014614412.1;Parent=gene-CYJ03_RS01990;Dbxref=GenBank:WP_014614412.1;Name=WP_014614412.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=CYJ03_RS01990;product=peptidylprolyl isomerase;protein_id=WP_014614412.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	104001	104381	.	+	.	ID=gene-CYJ03_RS01995;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01995;old_locus_tag=CYJ03_001990
NZ_PJUP02000003.1	Protein Homology	CDS	104001	104381	.	+	0	ID=cds-WP_014614413.1;Parent=gene-CYJ03_RS01995;Dbxref=GenBank:WP_014614413.1;Name=WP_014614413.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614413.1;locus_tag=CYJ03_RS01995;product=sporulation phosphorelay system protein KapB;protein_id=WP_014614413.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	104508	106925	.	+	.	ID=gene-CYJ03_RS02000;Name=CYJ03_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02000;old_locus_tag=CYJ03_001995
NZ_PJUP02000003.1	Protein Homology	CDS	104508	106925	.	+	0	ID=cds-WP_104052083.1;Parent=gene-CYJ03_RS02000;Dbxref=GenBank:WP_104052083.1;Name=WP_104052083.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=CYJ03_RS02000;product=Na+/H+ antiporter subunit A;protein_id=WP_104052083.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	106888	107334	.	+	.	ID=gene-CYJ03_RS02005;Name=CYJ03_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02005;old_locus_tag=CYJ03_002000
NZ_PJUP02000003.1	Protein Homology	CDS	106888	107334	.	+	0	ID=cds-WP_014614415.1;Parent=gene-CYJ03_RS02005;Dbxref=GenBank:WP_014614415.1;Name=WP_014614415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=CYJ03_RS02005;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_014614415.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	107334	107681	.	+	.	ID=gene-CYJ03_RS02010;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=CYJ03_RS02010;old_locus_tag=CYJ03_002005
NZ_PJUP02000003.1	Protein Homology	CDS	107334	107681	.	+	0	ID=cds-WP_014614416.1;Parent=gene-CYJ03_RS02010;Dbxref=GenBank:WP_014614416.1;Name=WP_014614416.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=CYJ03_RS02010;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_014614416.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	107671	109170	.	+	.	ID=gene-CYJ03_RS02015;Name=CYJ03_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02015;old_locus_tag=CYJ03_002010
NZ_PJUP02000003.1	Protein Homology	CDS	107671	109170	.	+	0	ID=cds-WP_014614417.1;Parent=gene-CYJ03_RS02015;Dbxref=GenBank:WP_014614417.1;Name=WP_014614417.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166977.1;locus_tag=CYJ03_RS02015;product=Na+/H+ antiporter subunit D;protein_id=WP_014614417.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	109172	109651	.	+	.	ID=gene-CYJ03_RS02020;Name=CYJ03_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02020;old_locus_tag=CYJ03_002015
NZ_PJUP02000003.1	Protein Homology	CDS	109172	109651	.	+	0	ID=cds-WP_014614418.1;Parent=gene-CYJ03_RS02020;Dbxref=GenBank:WP_014614418.1;Name=WP_014614418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=CYJ03_RS02020;product=Na+/H+ antiporter subunit E;protein_id=WP_014614418.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	109651	109944	.	+	.	ID=gene-CYJ03_RS02025;Name=CYJ03_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02025;old_locus_tag=CYJ03_002020
NZ_PJUP02000003.1	Protein Homology	CDS	109651	109944	.	+	0	ID=cds-WP_014614419.1;Parent=gene-CYJ03_RS02025;Dbxref=GenBank:WP_014614419.1;Name=WP_014614419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=CYJ03_RS02025;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_014614419.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	109922	110278	.	+	.	ID=gene-CYJ03_RS02030;Name=CYJ03_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02030;old_locus_tag=CYJ03_002025
NZ_PJUP02000003.1	Protein Homology	CDS	109922	110278	.	+	0	ID=cds-WP_014614420.1;Parent=gene-CYJ03_RS02030;Dbxref=GenBank:WP_014614420.1;Name=WP_014614420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=CYJ03_RS02030;product=Na+/H+ antiporter subunit G1;protein_id=WP_014614420.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	111215	111592	.	-	.	ID=gene-CYJ03_RS02035;Name=CYJ03_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02035;old_locus_tag=CYJ03_002030
NZ_PJUP02000003.1	Protein Homology	CDS	111215	111592	.	-	0	ID=cds-WP_037543544.1;Parent=gene-CYJ03_RS02035;Dbxref=GenBank:WP_037543544.1;Name=WP_037543544.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728863.1;locus_tag=CYJ03_RS02035;product=PaaI family thioesterase;protein_id=WP_037543544.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	111616	112929	.	-	.	ID=gene-CYJ03_RS02040;Name=CYJ03_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02040;old_locus_tag=CYJ03_002035
NZ_PJUP02000003.1	Protein Homology	CDS	111616	112929	.	-	0	ID=cds-WP_104052084.1;Parent=gene-CYJ03_RS02040;Dbxref=GenBank:WP_104052084.1;Name=WP_104052084.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=CYJ03_RS02040;product=Na+/H+ antiporter family protein;protein_id=WP_104052084.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	113067	114554	.	-	.	ID=gene-CYJ03_RS02045;Name=CYJ03_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02045;old_locus_tag=CYJ03_002040
NZ_PJUP02000003.1	Protein Homology	CDS	113067	114554	.	-	0	ID=cds-WP_104052085.1;Parent=gene-CYJ03_RS02045;Dbxref=GenBank:WP_104052085.1;Name=WP_104052085.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0046872,GO:0070006,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=manganese ion binding|0030145||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614423.1;locus_tag=CYJ03_RS02045;product=leucyl aminopeptidase family protein;protein_id=WP_104052085.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	114819	116021	.	-	.	ID=gene-CYJ03_RS02050;Name=CYJ03_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02050;old_locus_tag=CYJ03_002045
NZ_PJUP02000003.1	Protein Homology	CDS	114819	116021	.	-	0	ID=cds-WP_014614424.1;Parent=gene-CYJ03_RS02050;Dbxref=GenBank:WP_014614424.1;Name=WP_014614424.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=CYJ03_RS02050;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014614424.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	116442	116801	.	-	.	ID=gene-CYJ03_RS02055;Name=CYJ03_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02055;old_locus_tag=CYJ03_002050
NZ_PJUP02000003.1	Protein Homology	CDS	116442	116801	.	-	0	ID=cds-WP_014614425.1;Parent=gene-CYJ03_RS02055;Dbxref=GenBank:WP_014614425.1;Name=WP_014614425.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=CYJ03_RS02055;product=HesB/IscA family protein;protein_id=WP_014614425.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	116814	117050	.	-	.	ID=gene-CYJ03_RS02060;Name=CYJ03_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02060;old_locus_tag=CYJ03_002055
NZ_PJUP02000003.1	Protein Homology	CDS	116814	117050	.	-	0	ID=cds-WP_014614426.1;Parent=gene-CYJ03_RS02060;Dbxref=GenBank:WP_014614426.1;Name=WP_014614426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483813.1;locus_tag=CYJ03_RS02060;product=YuzB family protein;protein_id=WP_014614426.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	117341	118405	.	+	.	ID=gene-CYJ03_RS02065;Name=CYJ03_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02065;old_locus_tag=CYJ03_002060
NZ_PJUP02000003.1	Protein Homology	CDS	117341	118405	.	+	0	ID=cds-WP_104052086.1;Parent=gene-CYJ03_RS02065;Dbxref=GenBank:WP_104052086.1;Name=WP_104052086.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483814.1;locus_tag=CYJ03_RS02065;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_104052086.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	118765	119094	.	-	.	ID=gene-CYJ03_RS02070;Name=CYJ03_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02070;old_locus_tag=CYJ03_002065
NZ_PJUP02000003.1	Protein Homology	CDS	118765	119094	.	-	0	ID=cds-WP_101458262.1;Parent=gene-CYJ03_RS02070;Dbxref=GenBank:WP_101458262.1;Name=WP_101458262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168303.1;locus_tag=CYJ03_RS02070;product=YuzD family protein;protein_id=WP_101458262.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	119198	119440	.	+	.	ID=gene-CYJ03_RS02075;Name=CYJ03_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02075;old_locus_tag=CYJ03_002070
NZ_PJUP02000003.1	Protein Homology	CDS	119198	119440	.	+	0	ID=cds-WP_014614429.1;Parent=gene-CYJ03_RS02075;Dbxref=GenBank:WP_014614429.1;Name=WP_014614429.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=CYJ03_RS02075;product=NifU family protein;protein_id=WP_014614429.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	120025	120990	.	-	.	ID=gene-CYJ03_RS02080;Name=CYJ03_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02080;old_locus_tag=CYJ03_002075
NZ_PJUP02000003.1	Protein Homology	CDS	120025	120990	.	-	0	ID=cds-WP_014614430.1;Parent=gene-CYJ03_RS02080;Dbxref=GenBank:WP_014614430.1;Name=WP_014614430.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=CYJ03_RS02080;product=2-hydroxyacid dehydrogenase;protein_id=WP_014614430.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	120997	121782	.	-	.	ID=gene-CYJ03_RS02085;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;gene_synonym=yutF;locus_tag=CYJ03_RS02085;old_locus_tag=CYJ03_002080
NZ_PJUP02000003.1	Protein Homology	CDS	120997	121782	.	-	0	ID=cds-WP_014614431.1;Parent=gene-CYJ03_RS02085;Dbxref=GenBank:WP_014614431.1;Name=WP_014614431.1;Ontology_term=GO:0008253,GO:0016791,GO:0046872;gbkey=CDS;gene=nucF;go_function=5'-nucleotidase activity|0008253||IEA,phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166989.1;locus_tag=CYJ03_RS02085;product=5' nucleotidase NucF;protein_id=WP_014614431.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	121786	122217	.	-	.	ID=gene-CYJ03_RS02090;Name=CYJ03_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02090;old_locus_tag=CYJ03_002085
NZ_PJUP02000003.1	Protein Homology	CDS	121786	122217	.	-	0	ID=cds-WP_031253621.1;Parent=gene-CYJ03_RS02090;Dbxref=GenBank:WP_031253621.1;Name=WP_031253621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481626.1;locus_tag=CYJ03_RS02090;product=DUF86 domain-containing protein;protein_id=WP_031253621.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	122318	122584	.	+	.	ID=gene-CYJ03_RS02095;Name=CYJ03_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS02095;old_locus_tag=CYJ03_002090
NZ_PJUP02000003.1	Protein Homology	CDS	122318	122584	.	+	0	ID=cds-WP_096533850.1;Parent=gene-CYJ03_RS02095;Dbxref=GenBank:WP_096533850.1;Name=WP_096533850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=CYJ03_RS02095;product=DUF3055 domain-containing protein;protein_id=WP_096533850.1;transl_table=11
NZ_PJUP02000003.1	RefSeq	gene	123212	124411	.	-	.	ID=gene-CYJ03_RS02100;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS02100;old_locus_tag=CYJ03_002095
NZ_PJUP02000003.1	Protein Homology	CDS	123212	124411	.	-	0	ID=cds-WP_258058094.1;Parent=gene-CYJ03_RS02100;Dbxref=GenBank:WP_258058094.1;Name=WP_258058094.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479501.1;locus_tag=CYJ03_RS02100;product=group II intron reverse transcriptase/maturase;protein_id=WP_258058094.1;transl_table=11
##sequence-region NZ_PJUP02000002.1 1 148007
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000002.1	RefSeq	region	1	148007	.	+	.	ID=NZ_PJUP02000002.1:1..148007;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000002.1	RefSeq	gene	190	1323	.	+	.	ID=gene-CYJ03_RS00775;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CYJ03_RS00775;old_locus_tag=CYJ03_000775
NZ_PJUP02000002.1	Protein Homology	CDS	190	1323	.	+	0	ID=cds-WP_015729251.1;Parent=gene-CYJ03_RS00775;Dbxref=GenBank:WP_015729251.1;Name=WP_015729251.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CYJ03_RS00775;product=molecular chaperone DnaJ;protein_id=WP_015729251.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	1327	2259	.	+	.	ID=gene-CYJ03_RS00780;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00780;old_locus_tag=CYJ03_000780
NZ_PJUP02000002.1	Protein Homology	CDS	1327	2259	.	+	0	ID=cds-WP_014613778.1;Parent=gene-CYJ03_RS00780;Dbxref=GenBank:WP_014613778.1;Name=WP_014613778.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613778.1;locus_tag=CYJ03_RS00780;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_014613778.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	2261	3013	.	+	.	ID=gene-CYJ03_RS00785;Name=CYJ03_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00785;old_locus_tag=CYJ03_000785
NZ_PJUP02000002.1	Protein Homology	CDS	2261	3013	.	+	0	ID=cds-WP_014613779.1;Parent=gene-CYJ03_RS00785;Dbxref=GenBank:WP_014613779.1;Name=WP_014613779.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=CYJ03_RS00785;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_014613779.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	3018	4367	.	+	.	ID=gene-CYJ03_RS00790;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00790;old_locus_tag=CYJ03_000790
NZ_PJUP02000002.1	Protein Homology	CDS	3018	4367	.	+	0	ID=cds-WP_015729250.1;Parent=gene-CYJ03_RS00790;Dbxref=GenBank:WP_015729250.1;Name=WP_015729250.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729250.1;locus_tag=CYJ03_RS00790;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_015729250.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	4576	4752	.	+	.	ID=gene-CYJ03_RS00795;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CYJ03_RS00795;old_locus_tag=CYJ03_000795
NZ_PJUP02000002.1	Protein Homology	CDS	4576	4752	.	+	0	ID=cds-WP_002471046.1;Parent=gene-CYJ03_RS00795;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CYJ03_RS00795;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	5058	5651	.	+	.	ID=gene-CYJ03_RS00800;Name=CYJ03_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00800;old_locus_tag=CYJ03_000800
NZ_PJUP02000002.1	Protein Homology	CDS	5058	5651	.	+	0	ID=cds-WP_104052057.1;Parent=gene-CYJ03_RS00800;Dbxref=GenBank:WP_104052057.1;Name=WP_104052057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613781.1;locus_tag=CYJ03_RS00800;product=hypothetical protein;protein_id=WP_104052057.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	6036	6686	.	+	.	ID=gene-CYJ03_RS00805;Name=CYJ03_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00805;old_locus_tag=CYJ03_000805
NZ_PJUP02000002.1	Protein Homology	CDS	6036	6686	.	+	0	ID=cds-WP_015729248.1;Parent=gene-CYJ03_RS00805;Dbxref=GenBank:WP_015729248.1;Name=WP_015729248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613782.1;locus_tag=CYJ03_RS00805;product=NfeD family protein;protein_id=WP_015729248.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	6705	7700	.	+	.	ID=gene-CYJ03_RS00810;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00810;old_locus_tag=CYJ03_000810
NZ_PJUP02000002.1	Protein Homology	CDS	6705	7700	.	+	0	ID=cds-WP_014613783.1;Parent=gene-CYJ03_RS00810;Dbxref=GenBank:WP_014613783.1;Name=WP_014613783.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613783.1;locus_tag=CYJ03_RS00810;product=flotillin-like protein FloA;protein_id=WP_014613783.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	7714	8328	.	+	.	ID=gene-CYJ03_RS00815;Name=CYJ03_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00815;old_locus_tag=CYJ03_000815
NZ_PJUP02000002.1	Protein Homology	CDS	7714	8328	.	+	0	ID=cds-WP_014613784.1;Parent=gene-CYJ03_RS00815;Dbxref=GenBank:WP_014613784.1;Name=WP_014613784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729247.1;locus_tag=CYJ03_RS00815;product=hypothetical protein;protein_id=WP_014613784.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	8679	9623	.	+	.	ID=gene-CYJ03_RS00820;Name=CYJ03_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00820;old_locus_tag=CYJ03_000820
NZ_PJUP02000002.1	Protein Homology	CDS	8679	9623	.	+	0	ID=cds-WP_014613785.1;Parent=gene-CYJ03_RS00820;Dbxref=GenBank:WP_014613785.1;Name=WP_014613785.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168656.1;locus_tag=CYJ03_RS00820;product=PhoH family protein;protein_id=WP_014613785.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	9627	10088	.	+	.	ID=gene-CYJ03_RS00825;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CYJ03_RS00825;old_locus_tag=CYJ03_000825
NZ_PJUP02000002.1	Protein Homology	CDS	9627	10088	.	+	0	ID=cds-WP_014613786.1;Parent=gene-CYJ03_RS00825;Dbxref=GenBank:WP_014613786.1;Name=WP_014613786.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=CYJ03_RS00825;product=rRNA maturation RNase YbeY;protein_id=WP_014613786.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	10088	10435	.	+	.	ID=gene-CYJ03_RS00830;Name=CYJ03_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00830;old_locus_tag=CYJ03_000830
NZ_PJUP02000002.1	Protein Homology	CDS	10088	10435	.	+	0	ID=cds-WP_014613787.1;Parent=gene-CYJ03_RS00830;Dbxref=GenBank:WP_014613787.1;Name=WP_014613787.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165202.1;locus_tag=CYJ03_RS00830;product=diacylglycerol kinase family protein;protein_id=WP_014613787.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	10451	10858	.	+	.	ID=gene-CYJ03_RS00835;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CYJ03_RS00835;old_locus_tag=CYJ03_000835
NZ_PJUP02000002.1	Protein Homology	CDS	10451	10858	.	+	0	ID=cds-WP_014613788.1;Parent=gene-CYJ03_RS00835;Dbxref=GenBank:WP_014613788.1;Name=WP_014613788.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165203.1;locus_tag=CYJ03_RS00835;product=cytidine deaminase;protein_id=WP_014613788.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	10855	11751	.	+	.	ID=gene-CYJ03_RS00840;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CYJ03_RS00840;old_locus_tag=CYJ03_000840
NZ_PJUP02000002.1	Protein Homology	CDS	10855	11751	.	+	0	ID=cds-WP_014613789.1;Parent=gene-CYJ03_RS00840;Dbxref=GenBank:WP_014613789.1;Name=WP_014613789.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=CYJ03_RS00840;product=GTPase Era;protein_id=WP_014613789.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	11776	12546	.	+	.	ID=gene-CYJ03_RS00845;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CYJ03_RS00845;old_locus_tag=CYJ03_000845
NZ_PJUP02000002.1	Protein Homology	CDS	11776	12546	.	+	0	ID=cds-WP_015729246.1;Parent=gene-CYJ03_RS00845;Dbxref=GenBank:WP_015729246.1;Name=WP_015729246.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=CYJ03_RS00845;product=DNA repair protein RecO;protein_id=WP_015729246.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	12762	14156	.	-	.	ID=gene-CYJ03_RS00850;Name=CYJ03_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00850;old_locus_tag=CYJ03_000850
NZ_PJUP02000002.1	Protein Homology	CDS	12762	14156	.	-	0	ID=cds-WP_015729245.1;Parent=gene-CYJ03_RS00850;Dbxref=GenBank:WP_015729245.1;Name=WP_015729245.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165206.1;locus_tag=CYJ03_RS00850;product=glycine--tRNA ligase;protein_id=WP_015729245.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	14651	15271	.	+	.	ID=gene-CYJ03_RS00855;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=CYJ03_RS00855;old_locus_tag=CYJ03_000855
NZ_PJUP02000002.1	Protein Homology	CDS	14651	15271	.	+	0	ID=cds-WP_075773659.1;Parent=gene-CYJ03_RS00855;Dbxref=GenBank:WP_075773659.1;Name=WP_075773659.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724599.1;locus_tag=CYJ03_RS00855;product=transcriptional regulator CcpN;protein_id=WP_075773659.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	15286	16113	.	+	.	ID=gene-CYJ03_RS00860;Name=CYJ03_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00860;old_locus_tag=CYJ03_000860
NZ_PJUP02000002.1	Protein Homology	CDS	15286	16113	.	+	0	ID=cds-WP_014613793.1;Parent=gene-CYJ03_RS00860;Dbxref=GenBank:WP_014613793.1;Name=WP_014613793.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=CYJ03_RS00860;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_014613793.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	16186	17973	.	+	.	ID=gene-CYJ03_RS00865;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CYJ03_RS00865;old_locus_tag=CYJ03_000865
NZ_PJUP02000002.1	Protein Homology	CDS	16186	17973	.	+	0	ID=cds-WP_014613794.1;Parent=gene-CYJ03_RS00865;Dbxref=GenBank:WP_014613794.1;Name=WP_014613794.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729243.1;locus_tag=CYJ03_RS00865;product=DNA primase;protein_id=WP_014613794.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	17991	19100	.	+	.	ID=gene-CYJ03_RS00870;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CYJ03_RS00870;old_locus_tag=CYJ03_000870
NZ_PJUP02000002.1	Protein Homology	CDS	17991	19100	.	+	0	ID=cds-WP_014613795.1;Parent=gene-CYJ03_RS00870;Dbxref=GenBank:WP_014613795.1;Name=WP_014613795.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CYJ03_RS00870;product=RNA polymerase sigma factor RpoD;protein_id=WP_014613795.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	19616	20293	.	+	.	ID=gene-CYJ03_RS00875;Name=CYJ03_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00875;old_locus_tag=CYJ03_000875
NZ_PJUP02000002.1	Protein Homology	CDS	19616	20293	.	+	0	ID=cds-WP_014613796.1;Parent=gene-CYJ03_RS00875;Dbxref=GenBank:WP_014613796.1;Name=WP_014613796.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=CYJ03_RS00875;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_014613796.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	20290	21393	.	+	.	ID=gene-CYJ03_RS00880;Name=CYJ03_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00880;old_locus_tag=CYJ03_000880
NZ_PJUP02000002.1	Protein Homology	CDS	20290	21393	.	+	0	ID=cds-WP_065354199.1;Parent=gene-CYJ03_RS00880;Dbxref=GenBank:WP_065354199.1;Name=WP_065354199.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165212.1;locus_tag=CYJ03_RS00880;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_065354199.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	21547	22515	.	-	.	ID=gene-CYJ03_RS00885;Name=CYJ03_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00885;old_locus_tag=CYJ03_000885
NZ_PJUP02000002.1	Protein Homology	CDS	21547	22515	.	-	0	ID=cds-WP_014613798.1;Parent=gene-CYJ03_RS00885;Dbxref=GenBank:WP_014613798.1;Name=WP_014613798.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=CYJ03_RS00885;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_014613798.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	22696	24030	.	+	.	ID=gene-CYJ03_RS00890;Name=CYJ03_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00890;old_locus_tag=CYJ03_000890
NZ_PJUP02000002.1	Protein Homology	CDS	22696	24030	.	+	0	ID=cds-WP_014613799.1;Parent=gene-CYJ03_RS00890;Dbxref=GenBank:WP_014613799.1;Name=WP_014613799.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165214.1;locus_tag=CYJ03_RS00890;product=DEAD/DEAH box helicase;protein_id=WP_014613799.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	24055	24948	.	+	.	ID=gene-CYJ03_RS00895;Name=CYJ03_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00895;old_locus_tag=CYJ03_000895
NZ_PJUP02000002.1	Protein Homology	CDS	24055	24948	.	+	0	ID=cds-WP_015729240.1;Parent=gene-CYJ03_RS00895;Dbxref=GenBank:WP_015729240.1;Name=WP_015729240.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219766.1;locus_tag=CYJ03_RS00895;product=deoxyribonuclease IV;protein_id=WP_015729240.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	25133	25903	.	+	.	ID=gene-CYJ03_RS00900;Name=CYJ03_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00900;old_locus_tag=CYJ03_000900
NZ_PJUP02000002.1	Protein Homology	CDS	25133	25903	.	+	0	ID=cds-WP_014613801.1;Parent=gene-CYJ03_RS00900;Dbxref=GenBank:WP_014613801.1;Name=WP_014613801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219767.1;locus_tag=CYJ03_RS00900;product=metal ABC transporter ATP-binding protein;protein_id=WP_014613801.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	25900	26787	.	+	.	ID=gene-CYJ03_RS00905;Name=CYJ03_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00905;old_locus_tag=CYJ03_000905
NZ_PJUP02000002.1	Protein Homology	CDS	25900	26787	.	+	0	ID=cds-WP_014613802.1;Parent=gene-CYJ03_RS00905;Dbxref=GenBank:WP_014613802.1;Name=WP_014613802.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=CYJ03_RS00905;product=metal ABC transporter permease;protein_id=WP_014613802.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	26750	27157	.	+	.	ID=gene-CYJ03_RS00910;Name=CYJ03_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00910;old_locus_tag=CYJ03_000910
NZ_PJUP02000002.1	Protein Homology	CDS	26750	27157	.	+	0	ID=cds-WP_014613803.1;Parent=gene-CYJ03_RS00910;Dbxref=GenBank:WP_014613803.1;Name=WP_014613803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168672.1;locus_tag=CYJ03_RS00910;product=Fur family transcriptional regulator;protein_id=WP_014613803.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	27431	28537	.	-	.	ID=gene-CYJ03_RS00915;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CYJ03_RS00915;old_locus_tag=CYJ03_000915
NZ_PJUP02000002.1	Protein Homology	CDS	27431	28537	.	-	0	ID=cds-WP_014613804.1;Parent=gene-CYJ03_RS00915;Dbxref=GenBank:WP_014613804.1;Name=WP_014613804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219631.1;locus_tag=CYJ03_RS00915;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_014613804.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	28884	29483	.	+	.	ID=gene-CYJ03_RS00920;Name=CYJ03_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00920;old_locus_tag=CYJ03_000920
NZ_PJUP02000002.1	Protein Homology	CDS	28884	29483	.	+	0	ID=cds-WP_014613806.1;Parent=gene-CYJ03_RS00920;Dbxref=GenBank:WP_014613806.1;Name=WP_014613806.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=CYJ03_RS00920;product=superoxide dismutase;protein_id=WP_014613806.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	29776	31815	.	+	.	ID=gene-CYJ03_RS00925;Name=CYJ03_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00925;old_locus_tag=CYJ03_000925
NZ_PJUP02000002.1	Protein Homology	CDS	29776	31815	.	+	0	ID=cds-WP_063278771.1;Parent=gene-CYJ03_RS00925;Dbxref=GenBank:WP_063278771.1;Name=WP_063278771.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613807.1;locus_tag=CYJ03_RS00925;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_063278771.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	32084	33043	.	+	.	ID=gene-CYJ03_RS00930;Name=CYJ03_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00930;old_locus_tag=CYJ03_000930
NZ_PJUP02000002.1	Protein Homology	CDS	32084	33043	.	+	0	ID=cds-WP_015729236.1;Parent=gene-CYJ03_RS00930;Dbxref=GenBank:WP_015729236.1;Name=WP_015729236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219629.1;locus_tag=CYJ03_RS00930;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_015729236.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	33161	34087	.	+	.	ID=gene-CYJ03_RS00935;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CYJ03_RS00935;old_locus_tag=CYJ03_000935
NZ_PJUP02000002.1	Protein Homology	CDS	33161	34087	.	+	0	ID=cds-WP_014613809.1;Parent=gene-CYJ03_RS00935;Dbxref=GenBank:WP_014613809.1;Name=WP_014613809.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204623.1;locus_tag=CYJ03_RS00935;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_014613809.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	34087	34968	.	+	.	ID=gene-CYJ03_RS00940;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00940;old_locus_tag=CYJ03_000940
NZ_PJUP02000002.1	Protein Homology	CDS	34087	34968	.	+	0	ID=cds-WP_014613810.1;Parent=gene-CYJ03_RS00940;Dbxref=GenBank:WP_014613810.1;Name=WP_014613810.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219627.1;locus_tag=CYJ03_RS00940;product=phosphate ABC transporter permease PstA;protein_id=WP_014613810.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	34986	35828	.	+	.	ID=gene-CYJ03_RS00945;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00945;old_locus_tag=CYJ03_000945
NZ_PJUP02000002.1	Protein Homology	CDS	34986	35828	.	+	0	ID=cds-WP_014613811.1;Parent=gene-CYJ03_RS00945;Dbxref=GenBank:WP_014613811.1;Name=WP_014613811.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613811.1;locus_tag=CYJ03_RS00945;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_014613811.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	35830	36480	.	+	.	ID=gene-CYJ03_RS00950;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CYJ03_RS00950;old_locus_tag=CYJ03_000950
NZ_PJUP02000002.1	Protein Homology	CDS	35830	36480	.	+	0	ID=cds-WP_014613812.1;Parent=gene-CYJ03_RS00950;Dbxref=GenBank:WP_014613812.1;Name=WP_014613812.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613812.1;locus_tag=CYJ03_RS00950;product=phosphate signaling complex protein PhoU;protein_id=WP_014613812.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	36537	36701	.	+	.	ID=gene-CYJ03_RS00955;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CYJ03_RS00955;old_locus_tag=CYJ03_000955
NZ_PJUP02000002.1	Protein Homology	CDS	36537	36701	.	+	0	ID=cds-WP_256726578.1;Parent=gene-CYJ03_RS00955;Dbxref=GenBank:WP_256726578.1;Name=WP_256726578.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CYJ03_RS00955;product=50S ribosomal protein L33;protein_id=WP_256726578.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	36832	37392	.	+	.	ID=gene-CYJ03_RS00960;Name=CYJ03_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00960;old_locus_tag=CYJ03_000960
NZ_PJUP02000002.1	Protein Homology	CDS	36832	37392	.	+	0	ID=cds-WP_308629195.1;Parent=gene-CYJ03_RS00960;Dbxref=GenBank:WP_308629195.1;Name=WP_308629195.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613814.1;locus_tag=CYJ03_RS00960;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_308629195.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	37411	38850	.	+	.	ID=gene-CYJ03_RS00965;Name=CYJ03_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00965;old_locus_tag=CYJ03_000965
NZ_PJUP02000002.1	Protein Homology	CDS	37411	38850	.	+	0	ID=cds-WP_100006535.1;Parent=gene-CYJ03_RS00965;Dbxref=GenBank:WP_100006535.1;Name=WP_100006535.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=CYJ03_RS00965;product=rhomboid family intramembrane serine protease;protein_id=WP_100006535.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	38852	39055	.	+	.	ID=gene-CYJ03_RS00970;Name=CYJ03_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00970;old_locus_tag=CYJ03_000970
NZ_PJUP02000002.1	Protein Homology	CDS	38852	39055	.	+	0	ID=cds-WP_104052058.1;Parent=gene-CYJ03_RS00970;Dbxref=GenBank:WP_104052058.1;Name=WP_104052058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=CYJ03_RS00970;product=YqgQ family protein;protein_id=WP_104052058.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	39052	40038	.	+	.	ID=gene-CYJ03_RS00975;Name=CYJ03_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00975;old_locus_tag=CYJ03_000975
NZ_PJUP02000002.1	Protein Homology	CDS	39052	40038	.	+	0	ID=cds-WP_014613817.1;Parent=gene-CYJ03_RS00975;Dbxref=GenBank:WP_014613817.1;Name=WP_014613817.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=CYJ03_RS00975;product=ROK family glucokinase;protein_id=WP_014613817.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	40039	40350	.	+	.	ID=gene-CYJ03_RS00980;Name=CYJ03_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00980;old_locus_tag=CYJ03_000980
NZ_PJUP02000002.1	Protein Homology	CDS	40039	40350	.	+	0	ID=cds-WP_014613818.1;Parent=gene-CYJ03_RS00980;Dbxref=GenBank:WP_014613818.1;Name=WP_014613818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613818.1;locus_tag=CYJ03_RS00980;product=MTH1187 family thiamine-binding protein;protein_id=WP_014613818.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	40363	40992	.	+	.	ID=gene-CYJ03_RS00985;Name=CYJ03_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS00985;old_locus_tag=CYJ03_000985
NZ_PJUP02000002.1	Protein Homology	CDS	40363	40992	.	+	0	ID=cds-WP_037542865.1;Parent=gene-CYJ03_RS00985;Dbxref=GenBank:WP_037542865.1;Name=WP_037542865.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165229.1;locus_tag=CYJ03_RS00985;product=MBL fold metallo-hydrolase;protein_id=WP_037542865.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	41153	42127	.	+	.	ID=gene-CYJ03_RS00990;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=CYJ03_RS00990;old_locus_tag=CYJ03_000990
NZ_PJUP02000002.1	Protein Homology	CDS	41153	42127	.	+	0	ID=cds-WP_104052059.1;Parent=gene-CYJ03_RS00990;Dbxref=GenBank:WP_104052059.1;Name=WP_104052059.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165230.1;locus_tag=CYJ03_RS00990;product=competence type IV pilus ATPase ComGA;protein_id=WP_104052059.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	42096	43163	.	+	.	ID=gene-CYJ03_RS00995;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=CYJ03_RS00995;old_locus_tag=CYJ03_000995
NZ_PJUP02000002.1	Protein Homology	CDS	42096	43163	.	+	0	ID=cds-WP_037542939.1;Parent=gene-CYJ03_RS00995;Dbxref=GenBank:WP_037542939.1;Name=WP_037542939.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=CYJ03_RS00995;product=competence type IV pilus assembly protein ComGB;protein_id=WP_037542939.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	43176	43499	.	+	.	ID=gene-CYJ03_RS01000;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=CYJ03_RS01000;old_locus_tag=CYJ03_001000
NZ_PJUP02000002.1	Protein Homology	CDS	43176	43499	.	+	0	ID=cds-WP_015729165.1;Parent=gene-CYJ03_RS01000;Dbxref=GenBank:WP_015729165.1;Name=WP_015729165.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165232.1;locus_tag=CYJ03_RS01000;product=competence type IV pilus major pilin ComGC;protein_id=WP_015729165.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	43477	43917	.	+	.	ID=gene-CYJ03_RS01005;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=CYJ03_RS01005;old_locus_tag=CYJ03_001005
NZ_PJUP02000002.1	Protein Homology	CDS	43477	43917	.	+	0	ID=cds-WP_014613823.1;Parent=gene-CYJ03_RS01005;Dbxref=GenBank:WP_014613823.1;Name=WP_014613823.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729164.1;locus_tag=CYJ03_RS01005;product=competence type IV pilus minor pilin ComGD;protein_id=WP_014613823.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	43989	44222	.	+	.	ID=gene-CYJ03_RS01010;Name=CYJ03_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01010;old_locus_tag=CYJ03_001010
NZ_PJUP02000002.1	Protein Homology	CDS	43989	44222	.	+	0	ID=cds-WP_014613824.1;Parent=gene-CYJ03_RS01010;Dbxref=GenBank:WP_014613824.1;Name=WP_014613824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613824.1;locus_tag=CYJ03_RS01010;product=hypothetical protein;protein_id=WP_014613824.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	44128	44613	.	+	.	ID=gene-CYJ03_RS01015;Name=CYJ03_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01015;old_locus_tag=CYJ03_001015
NZ_PJUP02000002.1	Protein Homology	CDS	44128	44613	.	+	0	ID=cds-WP_080552896.1;Parent=gene-CYJ03_RS01015;Dbxref=GenBank:WP_080552896.1;Name=WP_080552896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=CYJ03_RS01015;product=competence type IV pilus minor pilin ComGF;protein_id=WP_080552896.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	44777	45304	.	+	.	ID=gene-CYJ03_RS01025;Name=CYJ03_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01025;old_locus_tag=CYJ03_001020
NZ_PJUP02000002.1	Protein Homology	CDS	44777	45304	.	+	0	ID=cds-WP_014613826.1;Parent=gene-CYJ03_RS01025;Dbxref=GenBank:WP_014613826.1;Name=WP_014613826.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613826.1;locus_tag=CYJ03_RS01025;product=shikimate kinase;protein_id=WP_014613826.1;transl_table=11
NZ_PJUP02000002.1	cmsearch	riboswitch	45291	45386	.	+	.	ID=id-NZ_PJUP02000002.1:45291..45386;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00504,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000002.1	RefSeq	gene	45462	46553	.	+	.	ID=gene-CYJ03_RS01030;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CYJ03_RS01030;old_locus_tag=CYJ03_001025
NZ_PJUP02000002.1	Protein Homology	CDS	45462	46553	.	+	0	ID=cds-WP_015729161.1;Parent=gene-CYJ03_RS01030;Dbxref=GenBank:WP_015729161.1;Name=WP_015729161.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636954.1;locus_tag=CYJ03_RS01030;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_015729161.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	46566	47915	.	+	.	ID=gene-CYJ03_RS01035;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01035;old_locus_tag=CYJ03_001030
NZ_PJUP02000002.1	Protein Homology	CDS	46566	47915	.	+	0	ID=cds-WP_104052060.1;Parent=gene-CYJ03_RS01035;Dbxref=GenBank:WP_104052060.1;Name=WP_104052060.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=CYJ03_RS01035;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_104052060.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	47905	49377	.	+	.	ID=gene-CYJ03_RS01040;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01040;old_locus_tag=CYJ03_001035
NZ_PJUP02000002.1	Protein Homology	CDS	47905	49377	.	+	0	ID=cds-WP_014613829.1;Parent=gene-CYJ03_RS01040;Dbxref=GenBank:WP_014613829.1;Name=WP_014613829.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500145.1;locus_tag=CYJ03_RS01040;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_014613829.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	49733	50110	.	-	.	ID=gene-CYJ03_RS01045;Name=CYJ03_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01045;old_locus_tag=CYJ03_001040
NZ_PJUP02000002.1	Protein Homology	CDS	49733	50110	.	-	0	ID=cds-WP_370498505.1;Parent=gene-CYJ03_RS01045;Dbxref=GenBank:WP_370498505.1;Name=WP_370498505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449897.1;locus_tag=CYJ03_RS01045;product=rhodanese-like domain-containing protein;protein_id=WP_370498505.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	50270	51100	.	+	.	ID=gene-CYJ03_RS01050;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=CYJ03_RS01050;old_locus_tag=CYJ03_001045
NZ_PJUP02000002.1	Protein Homology	CDS	50270	51100	.	+	0	ID=cds-WP_014613831.1;Parent=gene-CYJ03_RS01050;Dbxref=GenBank:WP_014613831.1;Name=WP_014613831.1;Ontology_term=GO:0009107,GO:0009249,GO:0036211,GO:0033819;gbkey=CDS;gene=lipM;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=CYJ03_RS01050;product=octanoyltransferase LipM;protein_id=WP_014613831.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	51216	51440	.	-	.	ID=gene-CYJ03_RS01055;Name=CYJ03_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01055;old_locus_tag=CYJ03_001050
NZ_PJUP02000002.1	Protein Homology	CDS	51216	51440	.	-	0	ID=cds-WP_014613832.1;Parent=gene-CYJ03_RS01055;Dbxref=GenBank:WP_014613832.1;Name=WP_014613832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613832.1;locus_tag=CYJ03_RS01055;product=SA1362 family protein;protein_id=WP_014613832.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	51461	52060	.	-	.	ID=gene-CYJ03_RS01060;Name=CYJ03_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01060;old_locus_tag=CYJ03_001055
NZ_PJUP02000002.1	Protein Homology	CDS	51461	52060	.	-	0	ID=cds-WP_015729159.1;Parent=gene-CYJ03_RS01060;Dbxref=GenBank:WP_015729159.1;Name=WP_015729159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613833.1;locus_tag=CYJ03_RS01060;product=coiled-coil domain-containing 22 family protein;protein_id=WP_015729159.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	52155	53225	.	+	.	ID=gene-CYJ03_RS01065;Name=CYJ03_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01065;old_locus_tag=CYJ03_001060
NZ_PJUP02000002.1	Protein Homology	CDS	52155	53225	.	+	0	ID=cds-WP_100007347.1;Parent=gene-CYJ03_RS01065;Dbxref=GenBank:WP_100007347.1;Name=WP_100007347.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613834.1;locus_tag=CYJ03_RS01065;product=M24 family metallopeptidase;protein_id=WP_100007347.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	53244	53801	.	+	.	ID=gene-CYJ03_RS01070;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CYJ03_RS01070;old_locus_tag=CYJ03_001065
NZ_PJUP02000002.1	Protein Homology	CDS	53244	53801	.	+	0	ID=cds-WP_014613835.1;Parent=gene-CYJ03_RS01070;Dbxref=GenBank:WP_014613835.1;Name=WP_014613835.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=CYJ03_RS01070;product=elongation factor P;protein_id=WP_014613835.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	54134	54595	.	+	.	ID=gene-CYJ03_RS01075;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01075;old_locus_tag=CYJ03_001070
NZ_PJUP02000002.1	Protein Homology	CDS	54134	54595	.	+	0	ID=cds-WP_037542948.1;Parent=gene-CYJ03_RS01075;Dbxref=GenBank:WP_037542948.1;Name=WP_037542948.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165243.1;locus_tag=CYJ03_RS01075;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037542948.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	54597	55952	.	+	.	ID=gene-CYJ03_RS01080;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CYJ03_RS01080;old_locus_tag=CYJ03_001075
NZ_PJUP02000002.1	Protein Homology	CDS	54597	55952	.	+	0	ID=cds-WP_037542950.1;Parent=gene-CYJ03_RS01080;Dbxref=GenBank:WP_037542950.1;Name=WP_037542950.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613837.1;locus_tag=CYJ03_RS01080;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_037542950.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	55973	56347	.	+	.	ID=gene-CYJ03_RS01085;Name=CYJ03_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01085;old_locus_tag=CYJ03_001080
NZ_PJUP02000002.1	Protein Homology	CDS	55973	56347	.	+	0	ID=cds-WP_014613838.1;Parent=gene-CYJ03_RS01085;Dbxref=GenBank:WP_014613838.1;Name=WP_014613838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=CYJ03_RS01085;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014613838.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	56368	56760	.	+	.	ID=gene-CYJ03_RS01090;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01090;old_locus_tag=CYJ03_001085
NZ_PJUP02000002.1	Protein Homology	CDS	56368	56760	.	+	0	ID=cds-WP_014613839.1;Parent=gene-CYJ03_RS01090;Dbxref=GenBank:WP_014613839.1;Name=WP_014613839.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=CYJ03_RS01090;product=transcription antitermination factor NusB;protein_id=WP_014613839.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	56769	58115	.	+	.	ID=gene-CYJ03_RS01095;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01095;old_locus_tag=CYJ03_001090
NZ_PJUP02000002.1	Protein Homology	CDS	56769	58115	.	+	0	ID=cds-WP_014613840.1;Parent=gene-CYJ03_RS01095;Dbxref=GenBank:WP_014613840.1;Name=WP_014613840.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=CYJ03_RS01095;product=exodeoxyribonuclease VII large subunit;protein_id=WP_014613840.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	58099	58323	.	+	.	ID=gene-CYJ03_RS01100;Name=CYJ03_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01100;old_locus_tag=CYJ03_001095
NZ_PJUP02000002.1	Protein Homology	CDS	58099	58323	.	+	0	ID=cds-WP_104052061.1;Parent=gene-CYJ03_RS01100;Dbxref=GenBank:WP_104052061.1;Name=WP_104052061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=CYJ03_RS01100;product=exodeoxyribonuclease VII small subunit;protein_id=WP_104052061.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	58304	59185	.	+	.	ID=gene-CYJ03_RS01105;Name=CYJ03_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01105;old_locus_tag=CYJ03_001100
NZ_PJUP02000002.1	Protein Homology	CDS	58304	59185	.	+	0	ID=cds-WP_041613228.1;Parent=gene-CYJ03_RS01105;Dbxref=GenBank:WP_041613228.1;Name=WP_041613228.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729158.1;locus_tag=CYJ03_RS01105;product=polyprenyl synthetase family protein;protein_id=WP_041613228.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	59255	61123	.	+	.	ID=gene-CYJ03_RS01110;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CYJ03_RS01110;old_locus_tag=CYJ03_001105
NZ_PJUP02000002.1	Protein Homology	CDS	59255	61123	.	+	0	ID=cds-WP_070407418.1;Parent=gene-CYJ03_RS01110;Dbxref=GenBank:WP_070407418.1;Name=WP_070407418.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219621.1;locus_tag=CYJ03_RS01110;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_070407418.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	61408	61860	.	+	.	ID=gene-CYJ03_RS01115;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=CYJ03_RS01115;old_locus_tag=CYJ03_001110
NZ_PJUP02000002.1	Protein Homology	CDS	61408	61860	.	+	0	ID=cds-WP_014613844.1;Parent=gene-CYJ03_RS01115;Dbxref=GenBank:WP_014613844.1;Name=WP_014613844.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=CYJ03_RS01115;product=transcriptional regulator AhrC/ArgR;protein_id=WP_014613844.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	61874	63556	.	+	.	ID=gene-CYJ03_RS01120;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CYJ03_RS01120;old_locus_tag=CYJ03_001115
NZ_PJUP02000002.1	Protein Homology	CDS	61874	63556	.	+	0	ID=cds-WP_099997434.1;Parent=gene-CYJ03_RS01120;Dbxref=GenBank:WP_099997434.1;Name=WP_099997434.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729156.1;locus_tag=CYJ03_RS01120;product=DNA repair protein RecN;protein_id=WP_099997434.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	63563	64456	.	+	.	ID=gene-CYJ03_RS01125;Name=CYJ03_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01125;old_locus_tag=CYJ03_001120
NZ_PJUP02000002.1	Protein Homology	CDS	63563	64456	.	+	0	ID=cds-WP_099997435.1;Parent=gene-CYJ03_RS01125;Dbxref=GenBank:WP_099997435.1;Name=WP_099997435.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613846.1;locus_tag=CYJ03_RS01125;product=phosphate acyltransferase;protein_id=WP_099997435.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	65030	66088	.	+	.	ID=gene-CYJ03_RS01130;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=CYJ03_RS01130;old_locus_tag=CYJ03_001125
NZ_PJUP02000002.1	Protein Homology	CDS	65030	66088	.	+	0	ID=cds-WP_014613847.1;Parent=gene-CYJ03_RS01130;Dbxref=GenBank:WP_014613847.1;Name=WP_014613847.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613847.1;locus_tag=CYJ03_RS01130;product=butyrate kinase;protein_id=WP_014613847.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	66099	67517	.	+	.	ID=gene-CYJ03_RS01135;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01135;old_locus_tag=CYJ03_001130
NZ_PJUP02000002.1	Protein Homology	CDS	66099	67517	.	+	0	ID=cds-WP_063278763.1;Parent=gene-CYJ03_RS01135;Dbxref=GenBank:WP_063278763.1;Name=WP_063278763.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=CYJ03_RS01135;product=dihydrolipoyl dehydrogenase;protein_id=WP_063278763.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	67539	68537	.	+	.	ID=gene-CYJ03_RS01140;Name=CYJ03_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01140;old_locus_tag=CYJ03_001135
NZ_PJUP02000002.1	Protein Homology	CDS	67539	68537	.	+	0	ID=cds-WP_014613849.1;Parent=gene-CYJ03_RS01140;Dbxref=GenBank:WP_014613849.1;Name=WP_014613849.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=CYJ03_RS01140;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014613849.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	68530	69513	.	+	.	ID=gene-CYJ03_RS01145;Name=CYJ03_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01145;old_locus_tag=CYJ03_001140
NZ_PJUP02000002.1	Protein Homology	CDS	68530	69513	.	+	0	ID=cds-WP_014613850.1;Parent=gene-CYJ03_RS01145;Dbxref=GenBank:WP_014613850.1;Name=WP_014613850.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=CYJ03_RS01145;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014613850.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	69526	70800	.	+	.	ID=gene-CYJ03_RS01150;Name=CYJ03_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01150;old_locus_tag=CYJ03_001145
NZ_PJUP02000002.1	Protein Homology	CDS	69526	70800	.	+	0	ID=cds-WP_063278761.1;Parent=gene-CYJ03_RS01150;Dbxref=GenBank:WP_063278761.1;Name=WP_063278761.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=CYJ03_RS01150;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_063278761.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	71026	71463	.	+	.	ID=gene-CYJ03_RS01155;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01155;old_locus_tag=CYJ03_001150
NZ_PJUP02000002.1	Protein Homology	CDS	71026	71463	.	+	0	ID=cds-WP_014613852.1;Parent=gene-CYJ03_RS01155;Dbxref=GenBank:WP_014613852.1;Name=WP_014613852.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=CYJ03_RS01155;product=bacilliredoxin BrxB;protein_id=WP_014613852.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	71474	72451	.	+	.	ID=gene-CYJ03_RS01160;Name=CYJ03_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01160;old_locus_tag=CYJ03_001155
NZ_PJUP02000002.1	Protein Homology	CDS	71474	72451	.	+	0	ID=cds-WP_063284388.1;Parent=gene-CYJ03_RS01160;Dbxref=GenBank:WP_063284388.1;Name=WP_063284388.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=CYJ03_RS01160;product=aromatic acid exporter family protein;protein_id=WP_063284388.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	72508	72609	.	-	.	ID=gene-CYJ03_RS12250;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=CYJ03_RS12250
NZ_PJUP02000002.1	Protein Homology	CDS	72508	72609	.	-	0	ID=cds-WP_019165260.1;Parent=gene-CYJ03_RS12250;Dbxref=GenBank:WP_019165260.1;Name=WP_019165260.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=CYJ03_RS12250;product=stressosome-associated protein Prli42;protein_id=WP_019165260.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	72780	73895	.	+	.	ID=gene-CYJ03_RS01165;Name=CYJ03_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01165;old_locus_tag=CYJ03_001160
NZ_PJUP02000002.1	Protein Homology	CDS	72780	73895	.	+	0	ID=cds-WP_063278760.1;Parent=gene-CYJ03_RS01165;Dbxref=GenBank:WP_063278760.1;Name=WP_063278760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613854.1;locus_tag=CYJ03_RS01165;product=tripeptidase T;protein_id=WP_063278760.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	73969	75372	.	+	.	ID=gene-CYJ03_RS01170;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=CYJ03_RS01170;old_locus_tag=CYJ03_001165
NZ_PJUP02000002.1	Protein Homology	CDS	73969	75372	.	+	0	ID=cds-WP_014613855.1;Parent=gene-CYJ03_RS01170;Dbxref=GenBank:WP_014613855.1;Name=WP_014613855.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=CYJ03_RS01170;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_014613855.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	75430	75720	.	-	.	ID=gene-CYJ03_RS01175;Name=CYJ03_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01175;old_locus_tag=CYJ03_001170
NZ_PJUP02000002.1	Protein Homology	CDS	75430	75720	.	-	0	ID=cds-WP_242442547.1;Parent=gene-CYJ03_RS01175;Dbxref=GenBank:WP_242442547.1;Name=WP_242442547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729151.1;locus_tag=CYJ03_RS01175;product=MFS transporter;protein_id=WP_242442547.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	75705	76202	.	-	.	ID=gene-CYJ03_RS01180;Name=CYJ03_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01180;old_locus_tag=CYJ03_001175
NZ_PJUP02000002.1	Protein Homology	CDS	75705	76202	.	-	0	ID=cds-WP_037542976.1;Parent=gene-CYJ03_RS01180;Dbxref=GenBank:WP_037542976.1;Name=WP_037542976.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=CYJ03_RS01180;product=MFS transporter;protein_id=WP_037542976.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	76351	76620	.	-	.	ID=gene-CYJ03_RS01185;Name=CYJ03_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01185;old_locus_tag=CYJ03_001180
NZ_PJUP02000002.1	Protein Homology	CDS	76351	76620	.	-	0	ID=cds-WP_226957563.1;Parent=gene-CYJ03_RS01185;Dbxref=GenBank:WP_226957563.1;Name=WP_226957563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729149.1;locus_tag=CYJ03_RS01185;product=MFS transporter;protein_id=WP_226957563.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	76802	77659	.	-	.	ID=gene-CYJ03_RS01190;Name=CYJ03_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01190;old_locus_tag=CYJ03_001185
NZ_PJUP02000002.1	Protein Homology	CDS	76802	77659	.	-	0	ID=cds-WP_014613858.1;Parent=gene-CYJ03_RS01190;Dbxref=GenBank:WP_014613858.1;Name=WP_014613858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168734.1;locus_tag=CYJ03_RS01190;product=AraC family transcriptional regulator;protein_id=WP_014613858.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	77800	79284	.	-	.	ID=gene-CYJ03_RS01195;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CYJ03_RS01195;old_locus_tag=CYJ03_001190
NZ_PJUP02000002.1	Protein Homology	CDS	77800	79284	.	-	0	ID=cds-WP_014613859.1;Parent=gene-CYJ03_RS01195;Dbxref=GenBank:WP_014613859.1;Name=WP_014613859.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165265.1;locus_tag=CYJ03_RS01195;product=glucose-6-phosphate dehydrogenase;protein_id=WP_014613859.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	79440	80357	.	+	.	ID=gene-CYJ03_RS01200;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CYJ03_RS01200;old_locus_tag=CYJ03_001195
NZ_PJUP02000002.1	Protein Homology	CDS	79440	80357	.	+	0	ID=cds-WP_014613860.1;Parent=gene-CYJ03_RS01200;Dbxref=GenBank:WP_014613860.1;Name=WP_014613860.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165266.1;locus_tag=CYJ03_RS01200;product=ribonuclease Z;protein_id=WP_014613860.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	80482	81297	.	-	.	ID=gene-CYJ03_RS01205;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CYJ03_RS01205;old_locus_tag=CYJ03_001200
NZ_PJUP02000002.1	Protein Homology	CDS	80482	81297	.	-	0	ID=cds-WP_014613861.1;Parent=gene-CYJ03_RS01205;Dbxref=GenBank:WP_014613861.1;Name=WP_014613861.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613861.1;locus_tag=CYJ03_RS01205;product=pyrroline-5-carboxylate reductase;protein_id=WP_014613861.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	81383	82138	.	+	.	ID=gene-CYJ03_RS01210;Name=CYJ03_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01210;old_locus_tag=CYJ03_001205
NZ_PJUP02000002.1	Protein Homology	CDS	81383	82138	.	+	0	ID=cds-WP_015729147.1;Parent=gene-CYJ03_RS01210;Dbxref=GenBank:WP_015729147.1;Name=WP_015729147.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729147.1;locus_tag=CYJ03_RS01210;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_015729147.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	82135	83055	.	-	.	ID=gene-CYJ03_RS01215;Name=CYJ03_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01215;old_locus_tag=CYJ03_001210
NZ_PJUP02000002.1	Protein Homology	CDS	82135	83055	.	-	0	ID=cds-WP_015729146.1;Parent=gene-CYJ03_RS01215;Dbxref=GenBank:WP_015729146.1;Name=WP_015729146.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613863.1;locus_tag=CYJ03_RS01215;product=aldo/keto reductase;protein_id=WP_015729146.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	83135	83677	.	+	.	ID=gene-CYJ03_RS01220;Name=CYJ03_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01220;old_locus_tag=CYJ03_001215
NZ_PJUP02000002.1	Protein Homology	CDS	83135	83677	.	+	0	ID=cds-WP_014613864.1;Parent=gene-CYJ03_RS01220;Dbxref=GenBank:WP_014613864.1;Name=WP_014613864.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613864.1;locus_tag=CYJ03_RS01220;product=NUDIX hydrolase;protein_id=WP_014613864.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	83782	84237	.	+	.	ID=gene-CYJ03_RS01225;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CYJ03_RS01225;old_locus_tag=CYJ03_001220
NZ_PJUP02000002.1	Protein Homology	CDS	83782	84237	.	+	0	ID=cds-WP_014613865.1;Parent=gene-CYJ03_RS01225;Dbxref=GenBank:WP_014613865.1;Name=WP_014613865.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613865.1;locus_tag=CYJ03_RS01225;product=ferric iron uptake transcriptional regulator;protein_id=WP_014613865.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	84277	85164	.	+	.	ID=gene-CYJ03_RS01230;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CYJ03_RS01230;old_locus_tag=CYJ03_001225
NZ_PJUP02000002.1	Protein Homology	CDS	84277	85164	.	+	0	ID=cds-WP_014613866.1;Parent=gene-CYJ03_RS01230;Dbxref=GenBank:WP_014613866.1;Name=WP_014613866.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447735.1;locus_tag=CYJ03_RS01230;product=site-specific tyrosine recombinase XerD;protein_id=WP_014613866.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	85451	85957	.	-	.	ID=gene-CYJ03_RS01235;Name=CYJ03_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01235;old_locus_tag=CYJ03_001230
NZ_PJUP02000002.1	Protein Homology	CDS	85451	85957	.	-	0	ID=cds-WP_096533738.1;Parent=gene-CYJ03_RS01235;Dbxref=GenBank:WP_096533738.1;Name=WP_096533738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613868.1;locus_tag=CYJ03_RS01235;product=DUF309 domain-containing protein;protein_id=WP_096533738.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	86052	86780	.	+	.	ID=gene-CYJ03_RS01240;Name=CYJ03_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01240;old_locus_tag=CYJ03_001235
NZ_PJUP02000002.1	Protein Homology	CDS	86052	86780	.	+	0	ID=cds-WP_065520493.1;Parent=gene-CYJ03_RS01240;Dbxref=GenBank:WP_065520493.1;Name=WP_065520493.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168744.1;locus_tag=CYJ03_RS01240;product=segregation and condensation protein A;protein_id=WP_065520493.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	86770	87312	.	+	.	ID=gene-CYJ03_RS01245;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01245;old_locus_tag=CYJ03_001240
NZ_PJUP02000002.1	Protein Homology	CDS	86770	87312	.	+	0	ID=cds-WP_063284382.1;Parent=gene-CYJ03_RS01245;Dbxref=GenBank:WP_063284382.1;Name=WP_063284382.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=CYJ03_RS01245;product=SMC-Scp complex subunit ScpB;protein_id=WP_063284382.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	87313	88059	.	+	.	ID=gene-CYJ03_RS01250;Name=CYJ03_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01250;old_locus_tag=CYJ03_001245
NZ_PJUP02000002.1	Protein Homology	CDS	87313	88059	.	+	0	ID=cds-WP_101457224.1;Parent=gene-CYJ03_RS01250;Dbxref=GenBank:WP_101457224.1;Name=WP_101457224.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165277.1;locus_tag=CYJ03_RS01250;product=pseudouridine synthase;protein_id=WP_101457224.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	88171	88893	.	+	.	ID=gene-CYJ03_RS01255;Name=CYJ03_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01255;old_locus_tag=CYJ03_001250
NZ_PJUP02000002.1	Protein Homology	CDS	88171	88893	.	+	0	ID=cds-WP_026066968.1;Parent=gene-CYJ03_RS01255;Dbxref=GenBank:WP_026066968.1;Name=WP_026066968.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724528.1;locus_tag=CYJ03_RS01255;product=response regulator transcription factor;protein_id=WP_026066968.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	88880	90637	.	+	.	ID=gene-CYJ03_RS01260;Name=CYJ03_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01260;old_locus_tag=CYJ03_001255
NZ_PJUP02000002.1	Protein Homology	CDS	88880	90637	.	+	0	ID=cds-WP_101457225.1;Parent=gene-CYJ03_RS01260;Dbxref=GenBank:WP_101457225.1;Name=WP_101457225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=CYJ03_RS01260;product=ATP-binding protein;protein_id=WP_101457225.1;transl_table=11
NZ_PJUP02000002.1	cmsearch	riboswitch	90793	90931	.	+	.	ID=id-NZ_PJUP02000002.1:90793..90931;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000002.1	RefSeq	gene	90997	91542	.	+	.	ID=gene-CYJ03_RS01265;Name=CYJ03_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01265;old_locus_tag=CYJ03_001260
NZ_PJUP02000002.1	Protein Homology	CDS	90997	91542	.	+	0	ID=cds-WP_014613874.1;Parent=gene-CYJ03_RS01265;Dbxref=GenBank:WP_014613874.1;Name=WP_014613874.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168748.1;locus_tag=CYJ03_RS01265;product=ECF transporter S component;protein_id=WP_014613874.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	91805	92053	.	-	.	ID=gene-CYJ03_RS01270;Name=CYJ03_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01270;old_locus_tag=CYJ03_001265
NZ_PJUP02000002.1	Protein Homology	CDS	91805	92053	.	-	0	ID=cds-WP_014613875.1;Parent=gene-CYJ03_RS01270;Dbxref=GenBank:WP_014613875.1;Name=WP_014613875.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CYJ03_RS01270;product=ferredoxin;protein_id=WP_014613875.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	92155	93102	.	+	.	ID=gene-CYJ03_RS01275;Name=CYJ03_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01275;old_locus_tag=CYJ03_001270
NZ_PJUP02000002.1	Protein Homology	CDS	92155	93102	.	+	0	ID=cds-WP_037542991.1;Parent=gene-CYJ03_RS01275;Dbxref=GenBank:WP_037542991.1;Name=WP_037542991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165280.1;locus_tag=CYJ03_RS01275;product=helix-turn-helix domain-containing protein;protein_id=WP_037542991.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	93095	94471	.	+	.	ID=gene-CYJ03_RS01280;Name=CYJ03_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01280;old_locus_tag=CYJ03_001275
NZ_PJUP02000002.1	Protein Homology	CDS	93095	94471	.	+	0	ID=cds-WP_037542994.1;Parent=gene-CYJ03_RS01280;Dbxref=GenBank:WP_037542994.1;Name=WP_037542994.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165281.1;locus_tag=CYJ03_RS01280;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_037542994.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	94646	96001	.	+	.	ID=gene-CYJ03_RS01285;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=CYJ03_RS01285;old_locus_tag=CYJ03_001280
NZ_PJUP02000002.1	Protein Homology	CDS	94646	96001	.	+	0	ID=cds-WP_101457226.1;Parent=gene-CYJ03_RS01285;Dbxref=GenBank:WP_101457226.1;Name=WP_101457226.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729142.1;locus_tag=CYJ03_RS01285;product=elastin-binding protein EbpS;protein_id=WP_101457226.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	96247	97233	.	+	.	ID=gene-CYJ03_RS01290;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01290;old_locus_tag=CYJ03_001285
NZ_PJUP02000002.1	Protein Homology	CDS	96247	97233	.	+	0	ID=cds-WP_014613879.1;Parent=gene-CYJ03_RS01290;Dbxref=GenBank:WP_014613879.1;Name=WP_014613879.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CYJ03_RS01290;product=bacillithiol disulfide reductase YpdA;protein_id=WP_014613879.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	97530	98498	.	-	.	ID=gene-CYJ03_RS01295;Name=CYJ03_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01295;old_locus_tag=CYJ03_001290
NZ_PJUP02000002.1	Protein Homology	CDS	97530	98498	.	-	0	ID=cds-WP_015729141.1;Parent=gene-CYJ03_RS01295;Dbxref=GenBank:WP_015729141.1;Name=WP_015729141.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=obsolete asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=CYJ03_RS01295;product=asparaginase;protein_id=WP_015729141.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	98572	99231	.	+	.	ID=gene-CYJ03_RS01300;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CYJ03_RS01300;old_locus_tag=CYJ03_001295
NZ_PJUP02000002.1	Protein Homology	CDS	98572	99231	.	+	0	ID=cds-WP_099997444.1;Parent=gene-CYJ03_RS01300;Dbxref=GenBank:WP_099997444.1;Name=WP_099997444.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613881.1;locus_tag=CYJ03_RS01300;product=(d)CMP kinase;protein_id=WP_099997444.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	99320	100504	.	+	.	ID=gene-CYJ03_RS01305;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01305;old_locus_tag=CYJ03_001300
NZ_PJUP02000002.1	Protein Homology	CDS	99320	100504	.	+	0	ID=cds-WP_014613882.1;Parent=gene-CYJ03_RS01305;Dbxref=GenBank:WP_014613882.1;Name=WP_014613882.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729140.1;locus_tag=CYJ03_RS01305;product=30S ribosomal protein S1;protein_id=WP_014613882.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	100871	102181	.	+	.	ID=gene-CYJ03_RS01310;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CYJ03_RS01310;old_locus_tag=CYJ03_001305
NZ_PJUP02000002.1	Protein Homology	CDS	100871	102181	.	+	0	ID=cds-WP_101458272.1;Parent=gene-CYJ03_RS01310;Dbxref=GenBank:WP_101458272.1;Name=WP_101458272.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CYJ03_RS01310;product=ribosome biogenesis GTPase Der;protein_id=WP_101458272.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	102197	103195	.	+	.	ID=gene-CYJ03_RS01315;Name=CYJ03_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01315;old_locus_tag=CYJ03_001310
NZ_PJUP02000002.1	Protein Homology	CDS	102197	103195	.	+	0	ID=cds-WP_014613884.1;Parent=gene-CYJ03_RS01315;Dbxref=GenBank:WP_014613884.1;Name=WP_014613884.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275732.1;locus_tag=CYJ03_RS01315;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_014613884.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	103366	103638	.	+	.	ID=gene-CYJ03_RS01320;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=CYJ03_RS01320;old_locus_tag=CYJ03_001315
NZ_PJUP02000002.1	Protein Homology	CDS	103366	103638	.	+	0	ID=cds-WP_014613885.1;Parent=gene-CYJ03_RS01320;Dbxref=GenBank:WP_014613885.1;Name=WP_014613885.1;Ontology_term=GO:0006270,GO:0030261,GO:0003677,GO:0030527,GO:0042802;gbkey=CDS;gene=hbs;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA,identical protein binding|0042802||IEA;go_process=DNA replication initiation|0006270||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CYJ03_RS01320;product=non-specific DNA-binding protein Hbs;protein_id=WP_014613885.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	104114	104683	.	+	.	ID=gene-CYJ03_RS01325;Name=CYJ03_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01325;old_locus_tag=CYJ03_001320
NZ_PJUP02000002.1	Protein Homology	CDS	104114	104683	.	+	0	ID=cds-WP_014613886.1;Parent=gene-CYJ03_RS01325;Dbxref=GenBank:WP_014613886.1;Name=WP_014613886.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613886.1;locus_tag=CYJ03_RS01325;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_014613886.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	104693	105406	.	+	.	ID=gene-CYJ03_RS01330;Name=CYJ03_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01330;old_locus_tag=CYJ03_001325
NZ_PJUP02000002.1	Protein Homology	CDS	104693	105406	.	+	0	ID=cds-WP_020219613.1;Parent=gene-CYJ03_RS01330;Dbxref=GenBank:WP_020219613.1;Name=WP_020219613.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613887.1;locus_tag=CYJ03_RS01330;product=demethylmenaquinone methyltransferase;protein_id=WP_020219613.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	105424	106380	.	+	.	ID=gene-CYJ03_RS01335;Name=CYJ03_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01335;old_locus_tag=CYJ03_001330
NZ_PJUP02000002.1	Protein Homology	CDS	105424	106380	.	+	0	ID=cds-WP_014613888.1;Parent=gene-CYJ03_RS01335;Dbxref=GenBank:WP_014613888.1;Name=WP_014613888.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=CYJ03_RS01335;product=polyprenyl synthetase family protein;protein_id=WP_014613888.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	106462	106914	.	+	.	ID=gene-CYJ03_RS01340;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CYJ03_RS01340;old_locus_tag=CYJ03_001335
NZ_PJUP02000002.1	Protein Homology	CDS	106462	106914	.	+	0	ID=cds-WP_014613889.1;Parent=gene-CYJ03_RS01340;Dbxref=GenBank:WP_014613889.1;Name=WP_014613889.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165294.1;locus_tag=CYJ03_RS01340;product=nucleoside-diphosphate kinase;protein_id=WP_014613889.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	107193	108359	.	+	.	ID=gene-CYJ03_RS01345;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CYJ03_RS01345;old_locus_tag=CYJ03_001340
NZ_PJUP02000002.1	Protein Homology	CDS	107193	108359	.	+	0	ID=cds-WP_037544222.1;Parent=gene-CYJ03_RS01345;Dbxref=GenBank:WP_037544222.1;Name=WP_037544222.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=CYJ03_RS01345;product=chorismate synthase;protein_id=WP_037544222.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	108376	109449	.	+	.	ID=gene-CYJ03_RS01350;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01350;old_locus_tag=CYJ03_001345
NZ_PJUP02000002.1	Protein Homology	CDS	108376	109449	.	+	0	ID=cds-WP_070407434.1;Parent=gene-CYJ03_RS01350;Dbxref=GenBank:WP_070407434.1;Name=WP_070407434.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=CYJ03_RS01350;product=3-dehydroquinate synthase;protein_id=WP_070407434.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	109450	110739	.	+	.	ID=gene-CYJ03_RS01355;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01355;old_locus_tag=CYJ03_001350
NZ_PJUP02000002.1	Protein Homology	CDS	109450	110739	.	+	0	ID=cds-WP_065354221.1;Parent=gene-CYJ03_RS01355;Dbxref=GenBank:WP_065354221.1;Name=WP_065354221.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=CYJ03_RS01355;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_065354221.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	110741	111982	.	+	.	ID=gene-CYJ03_RS01360;Name=CYJ03_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01360;old_locus_tag=CYJ03_001355
NZ_PJUP02000002.1	Protein Homology	CDS	110741	111982	.	+	0	ID=cds-WP_014613893.1;Parent=gene-CYJ03_RS01360;Dbxref=GenBank:WP_014613893.1;Name=WP_014613893.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=CYJ03_RS01360;product=tetratricopeptide repeat protein;protein_id=WP_014613893.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	111994	112551	.	+	.	ID=gene-CYJ03_RS01365;Name=CYJ03_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01365;old_locus_tag=CYJ03_001360
NZ_PJUP02000002.1	Protein Homology	CDS	111994	112551	.	+	0	ID=cds-WP_101458273.1;Parent=gene-CYJ03_RS01365;Dbxref=GenBank:WP_101458273.1;Name=WP_101458273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729137.1;locus_tag=CYJ03_RS01365;product=YpiB family protein;protein_id=WP_101458273.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	112580	113173	.	+	.	ID=gene-CYJ03_RS01370;Name=CYJ03_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01370;old_locus_tag=CYJ03_001365
NZ_PJUP02000002.1	Protein Homology	CDS	112580	113173	.	+	0	ID=cds-WP_014613895.1;Parent=gene-CYJ03_RS01370;Dbxref=GenBank:WP_014613895.1;Name=WP_014613895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613895.1;locus_tag=CYJ03_RS01370;product=DUF1405 domain-containing protein;protein_id=WP_014613895.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	113212	113910	.	+	.	ID=gene-CYJ03_RS01375;Name=CYJ03_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01375;old_locus_tag=CYJ03_001370
NZ_PJUP02000002.1	Protein Homology	CDS	113212	113910	.	+	0	ID=cds-WP_014613896.1;Parent=gene-CYJ03_RS01375;Dbxref=GenBank:WP_014613896.1;Name=WP_014613896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613896.1;locus_tag=CYJ03_RS01375;product=zinc metallopeptidase;protein_id=WP_014613896.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	114089	114412	.	+	.	ID=gene-CYJ03_RS01380;Name=CYJ03_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01380;old_locus_tag=CYJ03_001375
NZ_PJUP02000002.1	Protein Homology	CDS	114089	114412	.	+	0	ID=cds-WP_014613897.1;Parent=gene-CYJ03_RS01380;Dbxref=GenBank:WP_014613897.1;Name=WP_014613897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167611.1;locus_tag=CYJ03_RS01380;product=nucleotide pyrophosphohydrolase;protein_id=WP_014613897.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	114428	115552	.	+	.	ID=gene-CYJ03_RS01385;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01385;old_locus_tag=CYJ03_001380
NZ_PJUP02000002.1	Protein Homology	CDS	114428	115552	.	+	0	ID=cds-WP_014613898.1;Parent=gene-CYJ03_RS01385;Dbxref=GenBank:WP_014613898.1;Name=WP_014613898.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165302.1;locus_tag=CYJ03_RS01385;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_014613898.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	115556	116758	.	+	.	ID=gene-CYJ03_RS01390;Name=CYJ03_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01390;old_locus_tag=CYJ03_001385
NZ_PJUP02000002.1	Protein Homology	CDS	115556	116758	.	+	0	ID=cds-WP_015729134.1;Parent=gene-CYJ03_RS01390;Dbxref=GenBank:WP_015729134.1;Name=WP_015729134.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219610.1;locus_tag=CYJ03_RS01390;product=CCA tRNA nucleotidyltransferase;protein_id=WP_015729134.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	116742	117713	.	+	.	ID=gene-CYJ03_RS01395;Name=CYJ03_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01395;old_locus_tag=CYJ03_001390
NZ_PJUP02000002.1	Protein Homology	CDS	116742	117713	.	+	0	ID=cds-WP_015729133.1;Parent=gene-CYJ03_RS01395;Dbxref=GenBank:WP_015729133.1;Name=WP_015729133.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165304.1;locus_tag=CYJ03_RS01395;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_015729133.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	117741	120443	.	+	.	ID=gene-CYJ03_RS01400;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CYJ03_RS01400;old_locus_tag=CYJ03_001395
NZ_PJUP02000002.1	Protein Homology	CDS	117741	120443	.	+	0	ID=cds-WP_104039167.1;Parent=gene-CYJ03_RS01400;Dbxref=GenBank:WP_104039167.1;Name=WP_104039167.1;Ontology_term=GO:0004386,GO:0004527,GO:0005524;gbkey=CDS;gene=dinG;go_function=helicase activity|0004386||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729132.1;locus_tag=CYJ03_RS01400;product=ATP-dependent DNA helicase DinG%2C 3'-5' exoribonuclease type;protein_id=WP_104039167.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	120511	121803	.	+	.	ID=gene-CYJ03_RS01405;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CYJ03_RS01405;old_locus_tag=CYJ03_001400
NZ_PJUP02000002.1	Protein Homology	CDS	120511	121803	.	+	0	ID=cds-WP_014613902.1;Parent=gene-CYJ03_RS01405;Dbxref=GenBank:WP_014613902.1;Name=WP_014613902.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=CYJ03_RS01405;product=asparagine--tRNA ligase;protein_id=WP_014613902.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	121978	122670	.	+	.	ID=gene-CYJ03_RS01410;Name=CYJ03_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01410;old_locus_tag=CYJ03_001405
NZ_PJUP02000002.1	Protein Homology	CDS	121978	122670	.	+	0	ID=cds-WP_014613903.1;Parent=gene-CYJ03_RS01410;Dbxref=GenBank:WP_014613903.1;Name=WP_014613903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=CYJ03_RS01410;product=DnaD domain-containing protein;protein_id=WP_014613903.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	122660	123334	.	+	.	ID=gene-CYJ03_RS01415;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CYJ03_RS01415;old_locus_tag=CYJ03_001410
NZ_PJUP02000002.1	Protein Homology	CDS	122660	123334	.	+	0	ID=cds-WP_015729131.1;Parent=gene-CYJ03_RS01415;Dbxref=GenBank:WP_015729131.1;Name=WP_015729131.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=CYJ03_RS01415;product=endonuclease III;protein_id=WP_015729131.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	123331	123666	.	+	.	ID=gene-CYJ03_RS01420;Name=CYJ03_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01420;old_locus_tag=CYJ03_001415
NZ_PJUP02000002.1	Protein Homology	CDS	123331	123666	.	+	0	ID=cds-WP_014613905.1;Parent=gene-CYJ03_RS01420;Dbxref=GenBank:WP_014613905.1;Name=WP_014613905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613905.1;locus_tag=CYJ03_RS01420;product=YpoC family protein;protein_id=WP_014613905.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	124348	126570	.	-	.	ID=gene-CYJ03_RS01425;Name=CYJ03_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01425;old_locus_tag=CYJ03_001420
NZ_PJUP02000002.1	Protein Homology	CDS	124348	126570	.	-	0	ID=cds-WP_014613906.1;Parent=gene-CYJ03_RS01425;Dbxref=GenBank:WP_014613906.1;Name=WP_014613906.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165310.1;locus_tag=CYJ03_RS01425;product=transglycosylase domain-containing protein;protein_id=WP_014613906.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	126567	127193	.	-	.	ID=gene-CYJ03_RS01430;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=CYJ03_RS01430;old_locus_tag=CYJ03_001425
NZ_PJUP02000002.1	Protein Homology	CDS	126567	127193	.	-	0	ID=cds-WP_014613907.1;Parent=gene-CYJ03_RS01430;Dbxref=GenBank:WP_014613907.1;Name=WP_014613907.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=CYJ03_RS01430;product=Holliday junction resolvase RecU;protein_id=WP_014613907.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	127389	127730	.	+	.	ID=gene-CYJ03_RS01435;Name=CYJ03_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01435;old_locus_tag=CYJ03_001430
NZ_PJUP02000002.1	Protein Homology	CDS	127389	127730	.	+	0	ID=cds-WP_020219608.1;Parent=gene-CYJ03_RS01435;Dbxref=GenBank:WP_020219608.1;Name=WP_020219608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613908.1;locus_tag=CYJ03_RS01435;product=DUF1798 family protein;protein_id=WP_020219608.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	127723	128280	.	+	.	ID=gene-CYJ03_RS01440;Name=CYJ03_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01440;old_locus_tag=CYJ03_001435
NZ_PJUP02000002.1	Protein Homology	CDS	127723	128280	.	+	0	ID=cds-WP_065354227.1;Parent=gene-CYJ03_RS01440;Dbxref=GenBank:WP_065354227.1;Name=WP_065354227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165313.1;locus_tag=CYJ03_RS01440;product=SLOG family protein;protein_id=WP_065354227.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	128300	128635	.	+	.	ID=gene-CYJ03_RS01445;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01445;old_locus_tag=CYJ03_001440
NZ_PJUP02000002.1	Protein Homology	CDS	128300	128635	.	+	0	ID=cds-WP_014613910.1;Parent=gene-CYJ03_RS01445;Dbxref=GenBank:WP_014613910.1;Name=WP_014613910.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CYJ03_RS01445;product=cell division regulator GpsB;protein_id=WP_014613910.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	128677	129063	.	+	.	ID=gene-CYJ03_RS01450;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CYJ03_RS01450;old_locus_tag=CYJ03_001445
NZ_PJUP02000002.1	cmsearch	RNase_P_RNA	128677	129063	.	+	.	ID=rna-CYJ03_RS01450;Parent=gene-CYJ03_RS01450;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS01450;product=RNase P RNA component class B
NZ_PJUP02000002.1	cmsearch	exon	128677	129063	.	+	.	ID=exon-CYJ03_RS01450-1;Parent=rna-CYJ03_RS01450;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CYJ03_RS01450;product=RNase P RNA component class B
NZ_PJUP02000002.1	RefSeq	gene	129344	130471	.	+	.	ID=gene-CYJ03_RS01455;Name=CYJ03_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01455;old_locus_tag=CYJ03_001450
NZ_PJUP02000002.1	Protein Homology	CDS	129344	130471	.	+	0	ID=cds-WP_096636492.1;Parent=gene-CYJ03_RS01455;Dbxref=GenBank:WP_096636492.1;Name=WP_096636492.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219607.1;locus_tag=CYJ03_RS01455;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_096636492.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	130505	131422	.	+	.	ID=gene-CYJ03_RS01460;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CYJ03_RS01460;old_locus_tag=CYJ03_001455
NZ_PJUP02000002.1	Protein Homology	CDS	130505	131422	.	+	0	ID=cds-WP_063278738.1;Parent=gene-CYJ03_RS01460;Dbxref=GenBank:WP_063278738.1;Name=WP_063278738.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165315.1;locus_tag=CYJ03_RS01460;product=EamA family transporter RarD;protein_id=WP_063278738.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	131586	135041	.	+	.	ID=gene-CYJ03_RS01465;Name=CYJ03_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01465;old_locus_tag=CYJ03_001460
NZ_PJUP02000002.1	Protein Homology	CDS	131586	135041	.	+	0	ID=cds-WP_104052062.1;Parent=gene-CYJ03_RS01465;Dbxref=GenBank:WP_104052062.1;Name=WP_104052062.1;Ontology_term=GO:0003924,GO:0005525,GO:0008289;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=CYJ03_RS01465;product=dynamin family protein;protein_id=WP_104052062.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	135046	135927	.	+	.	ID=gene-CYJ03_RS01470;Name=CYJ03_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01470;old_locus_tag=CYJ03_001465
NZ_PJUP02000002.1	Protein Homology	CDS	135046	135927	.	+	0	ID=cds-WP_014613914.1;Parent=gene-CYJ03_RS01470;Dbxref=GenBank:WP_014613914.1;Name=WP_014613914.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729127.1;locus_tag=CYJ03_RS01470;product=5'-3' exonuclease;protein_id=WP_014613914.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	136057	136455	.	-	.	ID=gene-CYJ03_RS01475;Name=CYJ03_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01475;old_locus_tag=CYJ03_001470
NZ_PJUP02000002.1	Protein Homology	CDS	136057	136455	.	-	0	ID=cds-WP_096636489.1;Parent=gene-CYJ03_RS01475;Dbxref=GenBank:WP_096636489.1;Name=WP_096636489.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219606.1;locus_tag=CYJ03_RS01475;product=ribonuclease HI family protein;protein_id=WP_096636489.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	136511	137209	.	-	.	ID=gene-CYJ03_RS01480;Name=CYJ03_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01480;old_locus_tag=CYJ03_001475
NZ_PJUP02000002.1	Protein Homology	CDS	136511	137209	.	-	0	ID=cds-WP_101458202.1;Parent=gene-CYJ03_RS01480;Dbxref=GenBank:WP_101458202.1;Name=WP_101458202.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167630.1;locus_tag=CYJ03_RS01480;product=queuosine precursor transporter;protein_id=WP_101458202.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	137435	137620	.	+	.	ID=gene-CYJ03_RS01485;Name=CYJ03_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01485;old_locus_tag=CYJ03_001480
NZ_PJUP02000002.1	Protein Homology	CDS	137435	137620	.	+	0	ID=cds-WP_014613917.1;Parent=gene-CYJ03_RS01485;Dbxref=GenBank:WP_014613917.1;Name=WP_014613917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=CYJ03_RS01485;product=zinc-finger domain-containing protein;protein_id=WP_014613917.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	137652	138770	.	+	.	ID=gene-CYJ03_RS01490;Name=CYJ03_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01490;old_locus_tag=CYJ03_001485
NZ_PJUP02000002.1	Protein Homology	CDS	137652	138770	.	+	0	ID=cds-WP_101458201.1;Parent=gene-CYJ03_RS01490;Dbxref=GenBank:WP_101458201.1;Name=WP_101458201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165321.1;locus_tag=CYJ03_RS01490;product=conserved virulence factor C family protein;protein_id=WP_101458201.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	138795	139235	.	+	.	ID=gene-CYJ03_RS01495;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01495;old_locus_tag=CYJ03_001490
NZ_PJUP02000002.1	Protein Homology	CDS	138795	139235	.	+	0	ID=cds-WP_014613919.1;Parent=gene-CYJ03_RS01495;Dbxref=GenBank:WP_014613919.1;Name=WP_014613919.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=CYJ03_RS01495;product=bacilliredoxin BrxA;protein_id=WP_014613919.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	140041	140994	.	+	.	ID=gene-CYJ03_RS01500;Name=CYJ03_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01500;old_locus_tag=CYJ03_001495
NZ_PJUP02000002.1	Protein Homology	CDS	140041	140994	.	+	0	ID=cds-WP_014613920.1;Parent=gene-CYJ03_RS01500;Dbxref=GenBank:WP_014613920.1;Name=WP_014613920.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=CYJ03_RS01500;product=thymidylate synthase;protein_id=WP_014613920.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	141013	141492	.	+	.	ID=gene-CYJ03_RS01505;Name=CYJ03_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01505;old_locus_tag=CYJ03_001500
NZ_PJUP02000002.1	Protein Homology	CDS	141013	141492	.	+	0	ID=cds-WP_015729124.1;Parent=gene-CYJ03_RS01505;Dbxref=GenBank:WP_015729124.1;Name=WP_015729124.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=CYJ03_RS01505;product=dihydrofolate reductase;protein_id=WP_015729124.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	141511	142365	.	+	.	ID=gene-CYJ03_RS01510;Name=fakB;gbkey=Gene;gene=fakB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01510;old_locus_tag=CYJ03_001505
NZ_PJUP02000002.1	Protein Homology	CDS	141511	142365	.	+	0	ID=cds-WP_014613922.1;Parent=gene-CYJ03_RS01510;Dbxref=GenBank:WP_014613922.1;Name=WP_014613922.1;gbkey=CDS;gene=fakB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=CYJ03_RS01510;product=fatty acid kinase binding subunit FakB;protein_id=WP_014613922.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	142383	142907	.	+	.	ID=gene-CYJ03_RS01515;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS01515;old_locus_tag=CYJ03_001510
NZ_PJUP02000002.1	Protein Homology	CDS	142383	142907	.	+	0	ID=cds-WP_015729123.1;Parent=gene-CYJ03_RS01515;Dbxref=GenBank:WP_015729123.1;Name=WP_015729123.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165326.1;locus_tag=CYJ03_RS01515;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_015729123.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	142904	143332	.	+	.	ID=gene-CYJ03_RS01520;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CYJ03_RS01520;old_locus_tag=CYJ03_001515
NZ_PJUP02000002.1	Protein Homology	CDS	142904	143332	.	+	0	ID=cds-WP_096545463.1;Parent=gene-CYJ03_RS01520;Dbxref=GenBank:WP_096545463.1;Name=WP_096545463.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=CYJ03_RS01520;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_096545463.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	143346	143846	.	+	.	ID=gene-CYJ03_RS01525;Name=CYJ03_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01525;old_locus_tag=CYJ03_001520
NZ_PJUP02000002.1	Protein Homology	CDS	143346	143846	.	+	0	ID=cds-WP_096547873.1;Parent=gene-CYJ03_RS01525;Dbxref=GenBank:WP_096547873.1;Name=WP_096547873.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=CYJ03_RS01525;product=PTS sugar transporter subunit IIA;protein_id=WP_096547873.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	143846	144067	.	+	.	ID=gene-CYJ03_RS01530;Name=CYJ03_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01530;old_locus_tag=CYJ03_001525
NZ_PJUP02000002.1	Protein Homology	CDS	143846	144067	.	+	0	ID=cds-WP_014613926.1;Parent=gene-CYJ03_RS01530;Dbxref=GenBank:WP_014613926.1;Name=WP_014613926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=CYJ03_RS01530;product=YozE family protein;protein_id=WP_014613926.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	144190	145647	.	+	.	ID=gene-CYJ03_RS01535;Name=CYJ03_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01535;old_locus_tag=CYJ03_001530
NZ_PJUP02000002.1	Protein Homology	CDS	144190	145647	.	+	0	ID=cds-WP_258058092.1;Parent=gene-CYJ03_RS01535;Dbxref=GenBank:WP_258058092.1;Name=WP_258058092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342169.1;locus_tag=CYJ03_RS01535;product=S41 family peptidase;protein_id=WP_258058092.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	145647	146162	.	+	.	ID=gene-CYJ03_RS01540;Name=CYJ03_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01540;old_locus_tag=CYJ03_001535
NZ_PJUP02000002.1	Protein Homology	CDS	145647	146162	.	+	0	ID=cds-WP_020219604.1;Parent=gene-CYJ03_RS01540;Dbxref=GenBank:WP_020219604.1;Name=WP_020219604.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167642.1;locus_tag=CYJ03_RS01540;product=GNAT family N-acetyltransferase;protein_id=WP_020219604.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	146172	147257	.	+	.	ID=gene-CYJ03_RS01545;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CYJ03_RS01545;old_locus_tag=CYJ03_001540
NZ_PJUP02000002.1	Protein Homology	CDS	146172	147257	.	+	0	ID=cds-WP_014613929.1;Parent=gene-CYJ03_RS01545;Dbxref=GenBank:WP_014613929.1;Name=WP_014613929.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729120.1;locus_tag=CYJ03_RS01545;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_014613929.1;transl_table=11
NZ_PJUP02000002.1	RefSeq	gene	147254	147877	.	+	.	ID=gene-CYJ03_RS01550;Name=CYJ03_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS01550;old_locus_tag=CYJ03_001545
NZ_PJUP02000002.1	Protein Homology	CDS	147254	147877	.	+	0	ID=cds-WP_070407440.1;Parent=gene-CYJ03_RS01550;Dbxref=GenBank:WP_070407440.1;Name=WP_070407440.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729119.1;locus_tag=CYJ03_RS01550;product=phosphatase PAP2 family protein;protein_id=WP_070407440.1;transl_table=11
##sequence-region NZ_PJUP02000007.1 1 95935
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000007.1	RefSeq	region	1	95935	.	+	.	ID=NZ_PJUP02000007.1:1..95935;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000007.1	RefSeq	pseudogene	1	111	.	-	.	ID=gene-CYJ03_RS03535;Name=CYJ03_RS03535;end_range=111,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03535;old_locus_tag=CYJ03_003525;partial=true;pseudo=true;start_range=.,1
NZ_PJUP02000007.1	Protein Homology	CDS	1	111	.	-	0	ID=cds-CYJ03_RS03535;Parent=gene-CYJ03_RS03535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CYJ03_RS03535;partial=true;product=glutamine amidotransferase-related protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	143	301	.	+	.	ID=gene-CYJ03_RS12795;Name=CYJ03_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12795;old_locus_tag=CYJ03_003530
NZ_PJUP02000007.1	Protein Homology	CDS	143	301	.	+	0	ID=cds-WP_219821865.1;Parent=gene-CYJ03_RS12795;Dbxref=GenBank:WP_219821865.1;Name=WP_219821865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014967.6;locus_tag=CYJ03_RS12795;product=LamG domain-containing protein;protein_id=WP_219821865.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	pseudogene	297	611	.	+	.	ID=gene-CYJ03_RS03545;Name=CYJ03_RS03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03545;old_locus_tag=CYJ03_003535;partial=true;pseudo=true;start_range=.,297
NZ_PJUP02000007.1	Protein Homology	CDS	297	611	.	+	0	ID=cds-CYJ03_RS03545;Parent=gene-CYJ03_RS03545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169110.1;locus_tag=CYJ03_RS03545;partial=true;product=cell division protein FtsZ;pseudo=true;start_range=.,297;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	765	1577	.	+	.	ID=gene-CYJ03_RS03550;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03550;old_locus_tag=CYJ03_003540
NZ_PJUP02000007.1	Protein Homology	CDS	765	1577	.	+	0	ID=cds-WP_099987016.1;Parent=gene-CYJ03_RS03550;Dbxref=GenBank:WP_099987016.1;Name=WP_099987016.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=CYJ03_RS03550;product=peptidoglycan editing factor PgeF;protein_id=WP_099987016.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	1578	2252	.	+	.	ID=gene-CYJ03_RS03555;Name=CYJ03_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03555;old_locus_tag=CYJ03_003545
NZ_PJUP02000007.1	Protein Homology	CDS	1578	2252	.	+	0	ID=cds-WP_014614175.1;Parent=gene-CYJ03_RS03555;Dbxref=GenBank:WP_014614175.1;Name=WP_014614175.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263997.1;locus_tag=CYJ03_RS03555;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_014614175.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	2258	2818	.	+	.	ID=gene-CYJ03_RS03560;Name=CYJ03_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03560;old_locus_tag=CYJ03_003550
NZ_PJUP02000007.1	Protein Homology	CDS	2258	2818	.	+	0	ID=cds-WP_014614174.1;Parent=gene-CYJ03_RS03560;Dbxref=GenBank:WP_014614174.1;Name=WP_014614174.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=CYJ03_RS03560;product=cell division protein SepF;protein_id=WP_014614174.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	2830	3123	.	+	.	ID=gene-CYJ03_RS03565;Name=CYJ03_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03565;old_locus_tag=CYJ03_003555
NZ_PJUP02000007.1	Protein Homology	CDS	2830	3123	.	+	0	ID=cds-WP_014614173.1;Parent=gene-CYJ03_RS03565;Dbxref=GenBank:WP_014614173.1;Name=WP_014614173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=CYJ03_RS03565;product=YggT family protein;protein_id=WP_014614173.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	3355	3759	.	-	.	ID=gene-CYJ03_RS03570;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03570;old_locus_tag=CYJ03_003560
NZ_PJUP02000007.1	Protein Homology	CDS	3355	3759	.	-	0	ID=cds-WP_015728997.1;Parent=gene-CYJ03_RS03570;Dbxref=GenBank:WP_015728997.1;Name=WP_015728997.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=CYJ03_RS03570;product=D-ribose pyranase;protein_id=WP_015728997.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	3778	4659	.	-	.	ID=gene-CYJ03_RS03575;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=CYJ03_RS03575;old_locus_tag=CYJ03_003565
NZ_PJUP02000007.1	Protein Homology	CDS	3778	4659	.	-	0	ID=cds-WP_014614171.1;Parent=gene-CYJ03_RS03575;Dbxref=GenBank:WP_014614171.1;Name=WP_014614171.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CYJ03_RS03575;product=ribose/proton symporter RbsU;protein_id=WP_014614171.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	5016	5843	.	+	.	ID=gene-CYJ03_RS03580;Name=CYJ03_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03580;old_locus_tag=CYJ03_003570
NZ_PJUP02000007.1	Protein Homology	CDS	5016	5843	.	+	0	ID=cds-WP_063284593.1;Parent=gene-CYJ03_RS03580;Dbxref=GenBank:WP_063284593.1;Name=WP_063284593.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614170.1;locus_tag=CYJ03_RS03580;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063284593.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	5940	6863	.	+	.	ID=gene-CYJ03_RS03585;Name=CYJ03_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03585;old_locus_tag=CYJ03_003575
NZ_PJUP02000007.1	Protein Homology	CDS	5940	6863	.	+	0	ID=cds-WP_063284594.1;Parent=gene-CYJ03_RS03585;Dbxref=GenBank:WP_063284594.1;Name=WP_063284594.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165656.1;locus_tag=CYJ03_RS03585;product=dihydrodipicolinate synthase family protein;protein_id=WP_063284594.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	6891	8432	.	+	.	ID=gene-CYJ03_RS03590;Name=CYJ03_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03590;old_locus_tag=CYJ03_003580
NZ_PJUP02000007.1	Protein Homology	CDS	6891	8432	.	+	0	ID=cds-WP_100040311.1;Parent=gene-CYJ03_RS03590;Dbxref=GenBank:WP_100040311.1;Name=WP_100040311.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614168.1;locus_tag=CYJ03_RS03590;product=sodium:solute symporter family protein;protein_id=WP_100040311.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	8451	8900	.	+	.	ID=gene-CYJ03_RS03595;Name=CYJ03_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03595;old_locus_tag=CYJ03_003585
NZ_PJUP02000007.1	Protein Homology	CDS	8451	8900	.	+	0	ID=cds-WP_065354404.1;Parent=gene-CYJ03_RS03595;Dbxref=GenBank:WP_065354404.1;Name=WP_065354404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614167.1;locus_tag=CYJ03_RS03595;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_065354404.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	8915	11002	.	+	.	ID=gene-CYJ03_RS03600;Name=CYJ03_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03600;old_locus_tag=CYJ03_003590
NZ_PJUP02000007.1	Protein Homology	CDS	8915	11002	.	+	0	ID=cds-WP_104052168.1;Parent=gene-CYJ03_RS03600;Dbxref=GenBank:WP_104052168.1;Name=WP_104052168.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614166.1;locus_tag=CYJ03_RS03600;product=sialidase family protein;protein_id=WP_104052168.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	11018	12133	.	+	.	ID=gene-CYJ03_RS03605;Name=CYJ03_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03605;old_locus_tag=CYJ03_003595
NZ_PJUP02000007.1	Protein Homology	CDS	11018	12133	.	+	0	ID=cds-WP_104052169.1;Parent=gene-CYJ03_RS03605;Dbxref=GenBank:WP_104052169.1;Name=WP_104052169.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614165.1;locus_tag=CYJ03_RS03605;product=Gfo/Idh/MocA family protein;protein_id=WP_104052169.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	12403	13173	.	+	.	ID=gene-CYJ03_RS03610;Name=CYJ03_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03610;old_locus_tag=CYJ03_003600
NZ_PJUP02000007.1	Protein Homology	CDS	12403	13173	.	+	0	ID=cds-WP_015729001.1;Parent=gene-CYJ03_RS03610;Dbxref=GenBank:WP_015729001.1;Name=WP_015729001.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=CYJ03_RS03610;product=YlmH family RNA-binding protein;protein_id=WP_015729001.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	13197	13796	.	+	.	ID=gene-CYJ03_RS03615;Name=CYJ03_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03615;old_locus_tag=CYJ03_003605
NZ_PJUP02000007.1	Protein Homology	CDS	13197	13796	.	+	0	ID=cds-WP_015729002.1;Parent=gene-CYJ03_RS03615;Dbxref=GenBank:WP_015729002.1;Name=WP_015729002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166536.1;locus_tag=CYJ03_RS03615;product=DivIVA domain-containing protein;protein_id=WP_015729002.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	13997	16744	.	+	.	ID=gene-CYJ03_RS03620;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CYJ03_RS03620;old_locus_tag=CYJ03_003610
NZ_PJUP02000007.1	Protein Homology	CDS	13997	16744	.	+	0	ID=cds-WP_014614162.1;Parent=gene-CYJ03_RS03620;Dbxref=GenBank:WP_014614162.1;Name=WP_014614162.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=CYJ03_RS03620;product=isoleucine--tRNA ligase;protein_id=WP_014614162.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	16998	17483	.	+	.	ID=gene-CYJ03_RS03625;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03625;old_locus_tag=CYJ03_003615
NZ_PJUP02000007.1	Protein Homology	CDS	16998	17483	.	+	0	ID=cds-WP_014614161.1;Parent=gene-CYJ03_RS03625;Dbxref=GenBank:WP_014614161.1;Name=WP_014614161.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=CYJ03_RS03625;product=signal peptidase II;protein_id=WP_014614161.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	17483	18400	.	+	.	ID=gene-CYJ03_RS03630;Name=CYJ03_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03630;old_locus_tag=CYJ03_003620
NZ_PJUP02000007.1	Protein Homology	CDS	17483	18400	.	+	0	ID=cds-WP_015729003.1;Parent=gene-CYJ03_RS03630;Dbxref=GenBank:WP_015729003.1;Name=WP_015729003.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614160.1;locus_tag=CYJ03_RS03630;product=RluA family pseudouridine synthase;protein_id=WP_015729003.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	18686	19210	.	+	.	ID=gene-CYJ03_RS03635;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=CYJ03_RS03635;old_locus_tag=CYJ03_003625
NZ_PJUP02000007.1	Protein Homology	CDS	18686	19210	.	+	0	ID=cds-WP_014614159.1;Parent=gene-CYJ03_RS03635;Dbxref=GenBank:WP_014614159.1;Name=WP_014614159.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830167.1;locus_tag=CYJ03_RS03635;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_014614159.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	19388	20680	.	+	.	ID=gene-CYJ03_RS03640;Name=CYJ03_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03640;old_locus_tag=CYJ03_003630
NZ_PJUP02000007.1	Protein Homology	CDS	19388	20680	.	+	0	ID=cds-WP_014614158.1;Parent=gene-CYJ03_RS03640;Dbxref=GenBank:WP_014614158.1;Name=WP_014614158.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165552.1;locus_tag=CYJ03_RS03640;product=uracil-xanthine permease family protein;protein_id=WP_014614158.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	20702	21580	.	+	.	ID=gene-CYJ03_RS03645;Name=CYJ03_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03645;old_locus_tag=CYJ03_003635
NZ_PJUP02000007.1	Protein Homology	CDS	20702	21580	.	+	0	ID=cds-WP_014614157.1;Parent=gene-CYJ03_RS03645;Dbxref=GenBank:WP_014614157.1;Name=WP_014614157.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614157.1;locus_tag=CYJ03_RS03645;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014614157.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	21596	22870	.	+	.	ID=gene-CYJ03_RS03650;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03650;old_locus_tag=CYJ03_003640
NZ_PJUP02000007.1	Protein Homology	CDS	21596	22870	.	+	0	ID=cds-WP_037544242.1;Parent=gene-CYJ03_RS03650;Dbxref=GenBank:WP_037544242.1;Name=WP_037544242.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=CYJ03_RS03650;product=dihydroorotase;protein_id=WP_037544242.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	22873	23973	.	+	.	ID=gene-CYJ03_RS03655;Name=CYJ03_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03655;old_locus_tag=CYJ03_003645
NZ_PJUP02000007.1	Protein Homology	CDS	22873	23973	.	+	0	ID=cds-WP_014614155.1;Parent=gene-CYJ03_RS03655;Dbxref=GenBank:WP_014614155.1;Name=WP_014614155.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=CYJ03_RS03655;product=carbamoyl phosphate synthase small subunit;protein_id=WP_014614155.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	23966	27139	.	+	.	ID=gene-CYJ03_RS03660;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03660;old_locus_tag=CYJ03_003650
NZ_PJUP02000007.1	Protein Homology	CDS	23966	27139	.	+	0	ID=cds-WP_014614154.1;Parent=gene-CYJ03_RS03660;Dbxref=GenBank:WP_014614154.1;Name=WP_014614154.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=CYJ03_RS03660;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_014614154.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	27153	27917	.	+	.	ID=gene-CYJ03_RS03665;Name=CYJ03_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03665;old_locus_tag=CYJ03_003655
NZ_PJUP02000007.1	Protein Homology	CDS	27153	27917	.	+	0	ID=cds-WP_014614153.1;Parent=gene-CYJ03_RS03665;Dbxref=GenBank:WP_014614153.1;Name=WP_014614153.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=CYJ03_RS03665;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_014614153.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	27914	28834	.	+	.	ID=gene-CYJ03_RS03670;Name=CYJ03_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03670;old_locus_tag=CYJ03_003660
NZ_PJUP02000007.1	Protein Homology	CDS	27914	28834	.	+	0	ID=cds-WP_020220102.1;Parent=gene-CYJ03_RS03670;Dbxref=GenBank:WP_020220102.1;Name=WP_020220102.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=CYJ03_RS03670;product=dihydroorotate dehydrogenase;protein_id=WP_020220102.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	28836	29540	.	+	.	ID=gene-CYJ03_RS03675;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03675;old_locus_tag=CYJ03_003665
NZ_PJUP02000007.1	Protein Homology	CDS	28836	29540	.	+	0	ID=cds-WP_014614151.1;Parent=gene-CYJ03_RS03675;Dbxref=GenBank:WP_014614151.1;Name=WP_014614151.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614151.1;locus_tag=CYJ03_RS03675;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_014614151.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	29528	30136	.	+	.	ID=gene-CYJ03_RS03680;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CYJ03_RS03680;old_locus_tag=CYJ03_003670
NZ_PJUP02000007.1	Protein Homology	CDS	29528	30136	.	+	0	ID=cds-WP_104052170.1;Parent=gene-CYJ03_RS03680;Dbxref=GenBank:WP_104052170.1;Name=WP_104052170.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=CYJ03_RS03680;product=orotate phosphoribosyltransferase;protein_id=WP_104052170.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	30571	30984	.	+	.	ID=gene-CYJ03_RS03685;Name=CYJ03_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03685;old_locus_tag=CYJ03_003675
NZ_PJUP02000007.1	Protein Homology	CDS	30571	30984	.	+	0	ID=cds-WP_014614149.1;Parent=gene-CYJ03_RS03685;Dbxref=GenBank:WP_014614149.1;Name=WP_014614149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=CYJ03_RS03685;product=VOC family protein;protein_id=WP_014614149.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	31068	32771	.	-	.	ID=gene-CYJ03_RS03690;Name=CYJ03_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03690;old_locus_tag=CYJ03_003680
NZ_PJUP02000007.1	Protein Homology	CDS	31068	32771	.	-	0	ID=cds-WP_104052171.1;Parent=gene-CYJ03_RS03690;Dbxref=GenBank:WP_104052171.1;Name=WP_104052171.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729006.1;locus_tag=CYJ03_RS03690;product=Rqc2 family fibronectin-binding protein;protein_id=WP_104052171.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	32931	33554	.	+	.	ID=gene-CYJ03_RS03695;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CYJ03_RS03695;old_locus_tag=CYJ03_003685
NZ_PJUP02000007.1	Protein Homology	CDS	32931	33554	.	+	0	ID=cds-WP_014614147.1;Parent=gene-CYJ03_RS03695;Dbxref=GenBank:WP_014614147.1;Name=WP_014614147.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=CYJ03_RS03695;product=guanylate kinase;protein_id=WP_014614147.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	33554	33763	.	+	.	ID=gene-CYJ03_RS03700;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CYJ03_RS03700;old_locus_tag=CYJ03_003690
NZ_PJUP02000007.1	Protein Homology	CDS	33554	33763	.	+	0	ID=cds-WP_014614146.1;Parent=gene-CYJ03_RS03700;Dbxref=GenBank:WP_014614146.1;Name=WP_014614146.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=CYJ03_RS03700;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_014614146.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	34068	35273	.	+	.	ID=gene-CYJ03_RS03705;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03705;old_locus_tag=CYJ03_003695
NZ_PJUP02000007.1	Protein Homology	CDS	34068	35273	.	+	0	ID=cds-WP_041613233.1;Parent=gene-CYJ03_RS03705;Dbxref=GenBank:WP_041613233.1;Name=WP_041613233.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167385.1;locus_tag=CYJ03_RS03705;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_041613233.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	35270	37678	.	+	.	ID=gene-CYJ03_RS03710;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03710;old_locus_tag=CYJ03_003700
NZ_PJUP02000007.1	Protein Homology	CDS	35270	37678	.	+	0	ID=cds-WP_014614144.1;Parent=gene-CYJ03_RS03710;Dbxref=GenBank:WP_014614144.1;Name=WP_014614144.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560866.1;locus_tag=CYJ03_RS03710;product=primosomal protein N';protein_id=WP_014614144.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	37935	38420	.	+	.	ID=gene-CYJ03_RS03715;Name=CYJ03_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03715;old_locus_tag=CYJ03_003705
NZ_PJUP02000007.1	Protein Homology	CDS	37935	38420	.	+	0	ID=cds-WP_014614143.1;Parent=gene-CYJ03_RS03715;Dbxref=GenBank:WP_014614143.1;Name=WP_014614143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614143.1;locus_tag=CYJ03_RS03715;product=peptide deformylase;protein_id=WP_014614143.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	38413	39345	.	+	.	ID=gene-CYJ03_RS03720;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CYJ03_RS03720;old_locus_tag=CYJ03_003710
NZ_PJUP02000007.1	Protein Homology	CDS	38413	39345	.	+	0	ID=cds-WP_065354398.1;Parent=gene-CYJ03_RS03720;Dbxref=GenBank:WP_065354398.1;Name=WP_065354398.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=CYJ03_RS03720;product=methionyl-tRNA formyltransferase;protein_id=WP_065354398.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	39346	40647	.	+	.	ID=gene-CYJ03_RS03725;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03725;old_locus_tag=CYJ03_003715
NZ_PJUP02000007.1	Protein Homology	CDS	39346	40647	.	+	0	ID=cds-WP_101457085.1;Parent=gene-CYJ03_RS03725;Dbxref=GenBank:WP_101457085.1;Name=WP_101457085.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614141.1;locus_tag=CYJ03_RS03725;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_101457085.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	40653	41747	.	+	.	ID=gene-CYJ03_RS03730;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=CYJ03_RS03730;old_locus_tag=CYJ03_003720
NZ_PJUP02000007.1	Protein Homology	CDS	40653	41747	.	+	0	ID=cds-WP_014614140.1;Parent=gene-CYJ03_RS03730;Dbxref=GenBank:WP_014614140.1;Name=WP_014614140.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CYJ03_RS03730;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_014614140.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	41754	42497	.	+	.	ID=gene-CYJ03_RS03735;Name=CYJ03_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03735;old_locus_tag=CYJ03_003725
NZ_PJUP02000007.1	Protein Homology	CDS	41754	42497	.	+	0	ID=cds-WP_014614139.1;Parent=gene-CYJ03_RS03735;Dbxref=GenBank:WP_014614139.1;Name=WP_014614139.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=CYJ03_RS03735;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_014614139.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	42494	44500	.	+	.	ID=gene-CYJ03_RS03740;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03740;old_locus_tag=CYJ03_003730
NZ_PJUP02000007.1	Protein Homology	CDS	42494	44500	.	+	0	ID=cds-WP_100006722.1;Parent=gene-CYJ03_RS03740;Dbxref=GenBank:WP_100006722.1;Name=WP_100006722.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729014.1;locus_tag=CYJ03_RS03740;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_100006722.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	45260	46528	.	+	.	ID=gene-CYJ03_RS03745;Name=CYJ03_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03745;old_locus_tag=CYJ03_003735
NZ_PJUP02000007.1	Protein Homology	CDS	45260	46528	.	+	0	ID=cds-WP_014614137.1;Parent=gene-CYJ03_RS03745;Dbxref=GenBank:WP_014614137.1;Name=WP_014614137.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614137.1;locus_tag=CYJ03_RS03745;product=cytochrome P450;protein_id=WP_014614137.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	46705	47904	.	-	.	ID=gene-CYJ03_RS03750;Name=CYJ03_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03750;old_locus_tag=CYJ03_003740
NZ_PJUP02000007.1	Protein Homology	CDS	46705	47904	.	-	0	ID=cds-WP_308629197.1;Parent=gene-CYJ03_RS03750;Dbxref=GenBank:WP_308629197.1;Name=WP_308629197.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CYJ03_RS03750;product=IS110 family RNA-guided transposase;protein_id=WP_308629197.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	48277	49152	.	+	.	ID=gene-CYJ03_RS03755;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03755;old_locus_tag=CYJ03_003745
NZ_PJUP02000007.1	Protein Homology	CDS	48277	49152	.	+	0	ID=cds-WP_014614136.1;Parent=gene-CYJ03_RS03755;Dbxref=GenBank:WP_014614136.1;Name=WP_014614136.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=CYJ03_RS03755;product=ribosome small subunit-dependent GTPase A;protein_id=WP_014614136.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	49152	49802	.	+	.	ID=gene-CYJ03_RS03760;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CYJ03_RS03760;old_locus_tag=CYJ03_003750
NZ_PJUP02000007.1	Protein Homology	CDS	49152	49802	.	+	0	ID=cds-WP_014614135.1;Parent=gene-CYJ03_RS03760;Dbxref=GenBank:WP_014614135.1;Name=WP_014614135.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=CYJ03_RS03760;product=ribulose-phosphate 3-epimerase;protein_id=WP_014614135.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	49802	50443	.	+	.	ID=gene-CYJ03_RS03765;Name=CYJ03_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03765;old_locus_tag=CYJ03_003755
NZ_PJUP02000007.1	Protein Homology	CDS	49802	50443	.	+	0	ID=cds-WP_014614134.1;Parent=gene-CYJ03_RS03765;Dbxref=GenBank:WP_014614134.1;Name=WP_014614134.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614134.1;locus_tag=CYJ03_RS03765;product=thiamine diphosphokinase;protein_id=WP_014614134.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	50514	50702	.	-	.	ID=gene-CYJ03_RS03770;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03770;old_locus_tag=CYJ03_003760
NZ_PJUP02000007.1	Protein Homology	CDS	50514	50702	.	-	0	ID=cds-WP_014614133.1;Parent=gene-CYJ03_RS03770;Dbxref=GenBank:WP_014614133.1;Name=WP_014614133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CYJ03_RS03770;product=50S ribosomal protein L28;protein_id=WP_014614133.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	51035	51409	.	+	.	ID=gene-CYJ03_RS03775;Name=CYJ03_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03775;old_locus_tag=CYJ03_003765
NZ_PJUP02000007.1	Protein Homology	CDS	51035	51409	.	+	0	ID=cds-WP_014614132.1;Parent=gene-CYJ03_RS03775;Dbxref=GenBank:WP_014614132.1;Name=WP_014614132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=CYJ03_RS03775;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014614132.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	51422	53086	.	+	.	ID=gene-CYJ03_RS03780;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03780;old_locus_tag=CYJ03_003770
NZ_PJUP02000007.1	Protein Homology	CDS	51422	53086	.	+	0	ID=cds-WP_065354395.1;Parent=gene-CYJ03_RS03780;Dbxref=GenBank:WP_065354395.1;Name=WP_065354395.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303292.1;locus_tag=CYJ03_RS03780;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_065354395.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	54069	54734	.	+	.	ID=gene-CYJ03_RS03785;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03785;old_locus_tag=CYJ03_003775
NZ_PJUP02000007.1	Protein Homology	CDS	54069	54734	.	+	0	ID=cds-WP_014614130.1;Parent=gene-CYJ03_RS03785;Dbxref=GenBank:WP_014614130.1;Name=WP_014614130.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614130.1;locus_tag=CYJ03_RS03785;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_014614130.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	54753	55622	.	+	.	ID=gene-CYJ03_RS03790;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03790;old_locus_tag=CYJ03_003780
NZ_PJUP02000007.1	Protein Homology	CDS	54753	55622	.	+	0	ID=cds-WP_031254141.1;Parent=gene-CYJ03_RS03790;Dbxref=GenBank:WP_031254141.1;Name=WP_031254141.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=CYJ03_RS03790;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_031254141.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	55625	57670	.	+	.	ID=gene-CYJ03_RS03795;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CYJ03_RS03795;old_locus_tag=CYJ03_003785
NZ_PJUP02000007.1	Protein Homology	CDS	55625	57670	.	+	0	ID=cds-WP_014614128.1;Parent=gene-CYJ03_RS03795;Dbxref=GenBank:WP_014614128.1;Name=WP_014614128.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CYJ03_RS03795;product=ATP-dependent DNA helicase RecG;protein_id=WP_014614128.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	57797	58357	.	+	.	ID=gene-CYJ03_RS03800;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=CYJ03_RS03800;old_locus_tag=CYJ03_003790
NZ_PJUP02000007.1	Protein Homology	CDS	57797	58357	.	+	0	ID=cds-WP_026066989.1;Parent=gene-CYJ03_RS03800;Dbxref=GenBank:WP_026066989.1;Name=WP_026066989.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275971.1;locus_tag=CYJ03_RS03800;product=transcription factor FapR;protein_id=WP_026066989.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	58359	59345	.	+	.	ID=gene-CYJ03_RS03805;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CYJ03_RS03805;old_locus_tag=CYJ03_003795
NZ_PJUP02000007.1	Protein Homology	CDS	58359	59345	.	+	0	ID=cds-WP_015729017.1;Parent=gene-CYJ03_RS03805;Dbxref=GenBank:WP_015729017.1;Name=WP_015729017.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729017.1;locus_tag=CYJ03_RS03805;product=phosphate acyltransferase PlsX;protein_id=WP_015729017.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	59338	60264	.	+	.	ID=gene-CYJ03_RS03810;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03810;old_locus_tag=CYJ03_003800
NZ_PJUP02000007.1	Protein Homology	CDS	59338	60264	.	+	0	ID=cds-WP_104052173.1;Parent=gene-CYJ03_RS03810;Dbxref=GenBank:WP_104052173.1;Name=WP_104052173.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614125.1;locus_tag=CYJ03_RS03810;product=ACP S-malonyltransferase;protein_id=WP_104052173.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	60257	60994	.	+	.	ID=gene-CYJ03_RS03815;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CYJ03_RS03815;old_locus_tag=CYJ03_003805
NZ_PJUP02000007.1	Protein Homology	CDS	60257	60994	.	+	0	ID=cds-WP_014614124.1;Parent=gene-CYJ03_RS03815;Dbxref=GenBank:WP_014614124.1;Name=WP_014614124.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=CYJ03_RS03815;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_014614124.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	61223	61456	.	+	.	ID=gene-CYJ03_RS03820;Name=CYJ03_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03820;old_locus_tag=CYJ03_003810
NZ_PJUP02000007.1	Protein Homology	CDS	61223	61456	.	+	0	ID=cds-WP_014614123.1;Parent=gene-CYJ03_RS03820;Dbxref=GenBank:WP_014614123.1;Name=WP_014614123.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CYJ03_RS03820;product=acyl carrier protein;protein_id=WP_014614123.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	62350	63081	.	+	.	ID=gene-CYJ03_RS03825;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CYJ03_RS03825;old_locus_tag=CYJ03_003815
NZ_PJUP02000007.1	Protein Homology	CDS	62350	63081	.	+	0	ID=cds-WP_014614122.1;Parent=gene-CYJ03_RS03825;Dbxref=GenBank:WP_014614122.1;Name=WP_014614122.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165652.1;locus_tag=CYJ03_RS03825;product=ribonuclease III;protein_id=WP_014614122.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	63085	66657	.	+	.	ID=gene-CYJ03_RS03830;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CYJ03_RS03830;old_locus_tag=CYJ03_003820
NZ_PJUP02000007.1	Protein Homology	CDS	63085	66657	.	+	0	ID=cds-WP_101457083.1;Parent=gene-CYJ03_RS03830;Dbxref=GenBank:WP_101457083.1;Name=WP_101457083.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=CYJ03_RS03830;product=chromosome segregation protein SMC;protein_id=WP_101457083.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	66659	67858	.	+	.	ID=gene-CYJ03_RS03835;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CYJ03_RS03835;old_locus_tag=CYJ03_003825
NZ_PJUP02000007.1	Protein Homology	CDS	66659	67858	.	+	0	ID=cds-WP_101431295.1;Parent=gene-CYJ03_RS03835;Dbxref=GenBank:WP_101431295.1;Name=WP_101431295.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614120.1;locus_tag=CYJ03_RS03835;product=signal recognition particle-docking protein FtsY;protein_id=WP_101431295.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	67862	68197	.	+	.	ID=gene-CYJ03_RS03840;Name=CYJ03_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03840;old_locus_tag=CYJ03_003830
NZ_PJUP02000007.1	Protein Homology	CDS	67862	68197	.	+	0	ID=cds-WP_096548902.1;Parent=gene-CYJ03_RS03840;Dbxref=GenBank:WP_096548902.1;Name=WP_096548902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614119.1;locus_tag=CYJ03_RS03840;product=putative DNA-binding protein;protein_id=WP_096548902.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	68211	69578	.	+	.	ID=gene-CYJ03_RS03845;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CYJ03_RS03845;old_locus_tag=CYJ03_003835
NZ_PJUP02000007.1	Protein Homology	CDS	68211	69578	.	+	0	ID=cds-WP_015729019.1;Parent=gene-CYJ03_RS03845;Dbxref=GenBank:WP_015729019.1;Name=WP_015729019.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CYJ03_RS03845;product=signal recognition particle protein;protein_id=WP_015729019.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	pseudogene	70491	70673	.	-	.	ID=gene-CYJ03_RS12930;Name=CYJ03_RS12930;end_range=70673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12930;partial=true;pseudo=true;start_range=.,70491
NZ_PJUP02000007.1	Protein Homology	CDS	70491	70673	.	-	0	ID=cds-CYJ03_RS12930;Parent=gene-CYJ03_RS12930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=70673,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_336253575.1;locus_tag=CYJ03_RS12930;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,70491;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	70756	71610	.	-	.	ID=gene-CYJ03_RS03855;Name=CYJ03_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03855;old_locus_tag=CYJ03_003845
NZ_PJUP02000007.1	Protein Homology	CDS	70756	71610	.	-	0	ID=cds-WP_101431709.1;Parent=gene-CYJ03_RS03855;Dbxref=GenBank:WP_101431709.1;Name=WP_101431709.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614116.1;locus_tag=CYJ03_RS03855;product=helix-turn-helix domain-containing protein;protein_id=WP_101431709.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	72252	72695	.	+	.	ID=gene-CYJ03_RS03860;Name=CYJ03_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03860;old_locus_tag=CYJ03_003850
NZ_PJUP02000007.1	GeneMarkS-2+	CDS	72252	72695	.	+	0	ID=cds-WP_041614826.1;Parent=gene-CYJ03_RS03860;Dbxref=GenBank:WP_041614826.1;Name=WP_041614826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS03860;product=hypothetical protein;protein_id=WP_041614826.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	72919	73485	.	+	.	ID=gene-CYJ03_RS03865;Name=CYJ03_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03865;old_locus_tag=CYJ03_003855
NZ_PJUP02000007.1	Protein Homology	CDS	72919	73485	.	+	0	ID=cds-WP_104052175.1;Parent=gene-CYJ03_RS03865;Dbxref=GenBank:WP_104052175.1;Name=WP_104052175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614113.1;locus_tag=CYJ03_RS03865;product=CYTH domain-containing protein;protein_id=WP_104052175.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	73463	74731	.	+	.	ID=gene-CYJ03_RS12525;Name=CYJ03_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12525
NZ_PJUP02000007.1	Protein Homology	CDS	73463	74731	.	+	0	ID=cds-WP_258058098.1;Parent=gene-CYJ03_RS12525;Dbxref=GenBank:WP_258058098.1;Name=WP_258058098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729025.1;locus_tag=CYJ03_RS12525;product=hypothetical protein;protein_id=WP_258058098.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	75065	76273	.	+	.	ID=gene-CYJ03_RS03880;Name=CYJ03_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03880;old_locus_tag=CYJ03_003870
NZ_PJUP02000007.1	Protein Homology	CDS	75065	76273	.	+	0	ID=cds-WP_104052176.1;Parent=gene-CYJ03_RS03880;Dbxref=GenBank:WP_104052176.1;Name=WP_104052176.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614110.1;locus_tag=CYJ03_RS03880;product=MFS transporter;protein_id=WP_104052176.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	76456	77646	.	+	.	ID=gene-CYJ03_RS03885;Name=CYJ03_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03885;old_locus_tag=CYJ03_003875
NZ_PJUP02000007.1	Protein Homology	CDS	76456	77646	.	+	0	ID=cds-WP_104052177.1;Parent=gene-CYJ03_RS03885;Dbxref=GenBank:WP_104052177.1;Name=WP_104052177.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729027.1;locus_tag=CYJ03_RS03885;product=MFS transporter;protein_id=WP_104052177.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	pseudogene	78439	78669	.	+	.	ID=gene-CYJ03_RS03890;Name=CYJ03_RS03890;end_range=78669,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03890;old_locus_tag=CYJ03_003880;partial=true;pseudo=true
NZ_PJUP02000007.1	Protein Homology	CDS	78439	78669	.	+	0	ID=cds-CYJ03_RS03890;Parent=gene-CYJ03_RS03890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=78669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498760.1;locus_tag=CYJ03_RS03890;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	78777	79448	.	+	.	ID=gene-CYJ03_RS03895;Name=CYJ03_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03895;old_locus_tag=CYJ03_003885
NZ_PJUP02000007.1	Protein Homology	CDS	78777	79448	.	+	0	ID=cds-WP_104052178.1;Parent=gene-CYJ03_RS03895;Dbxref=GenBank:WP_104052178.1;Name=WP_104052178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729028.1;locus_tag=CYJ03_RS03895;product=hypothetical protein;protein_id=WP_104052178.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	79661	79936	.	+	.	ID=gene-CYJ03_RS03900;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CYJ03_RS03900;old_locus_tag=CYJ03_003890
NZ_PJUP02000007.1	Protein Homology	CDS	79661	79936	.	+	0	ID=cds-WP_014614106.1;Parent=gene-CYJ03_RS03900;Dbxref=GenBank:WP_014614106.1;Name=WP_014614106.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=CYJ03_RS03900;product=30S ribosomal protein S16;protein_id=WP_014614106.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	80259	80762	.	+	.	ID=gene-CYJ03_RS03905;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CYJ03_RS03905;old_locus_tag=CYJ03_003895
NZ_PJUP02000007.1	Protein Homology	CDS	80259	80762	.	+	0	ID=cds-WP_014614105.1;Parent=gene-CYJ03_RS03905;Dbxref=GenBank:WP_014614105.1;Name=WP_014614105.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=CYJ03_RS03905;product=ribosome maturation factor RimM;protein_id=WP_014614105.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	80759	81490	.	+	.	ID=gene-CYJ03_RS03910;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03910;old_locus_tag=CYJ03_003900
NZ_PJUP02000007.1	Protein Homology	CDS	80759	81490	.	+	0	ID=cds-WP_014614104.1;Parent=gene-CYJ03_RS03910;Dbxref=GenBank:WP_014614104.1;Name=WP_014614104.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165492.1;locus_tag=CYJ03_RS03910;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_014614104.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	81598	81948	.	+	.	ID=gene-CYJ03_RS03915;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CYJ03_RS03915;old_locus_tag=CYJ03_003905
NZ_PJUP02000007.1	Protein Homology	CDS	81598	81948	.	+	0	ID=cds-WP_014614103.1;Parent=gene-CYJ03_RS03915;Dbxref=GenBank:WP_014614103.1;Name=WP_014614103.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=CYJ03_RS03915;product=50S ribosomal protein L19;protein_id=WP_014614103.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	82216	82353	.	-	.	ID=gene-CYJ03_RS03920;Name=CYJ03_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03920;old_locus_tag=CYJ03_003910
NZ_PJUP02000007.1	Protein Homology	CDS	82216	82353	.	-	0	ID=cds-WP_015729029.1;Parent=gene-CYJ03_RS03920;Dbxref=GenBank:WP_015729029.1;Name=WP_015729029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614102.1;locus_tag=CYJ03_RS03920;product=beta-class phenol-soluble modulin;protein_id=WP_015729029.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	82858	83286	.	+	.	ID=gene-CYJ03_RS03925;Name=CYJ03_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03925;old_locus_tag=CYJ03_003915
NZ_PJUP02000007.1	Protein Homology	CDS	82858	83286	.	+	0	ID=cds-WP_015729030.1;Parent=gene-CYJ03_RS03925;Dbxref=GenBank:WP_015729030.1;Name=WP_015729030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729030.1;locus_tag=CYJ03_RS03925;product=hypothetical protein;protein_id=WP_015729030.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	83287	83685	.	+	.	ID=gene-CYJ03_RS03930;Name=CYJ03_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03930;old_locus_tag=CYJ03_003920
NZ_PJUP02000007.1	Protein Homology	CDS	83287	83685	.	+	0	ID=cds-WP_014614100.1;Parent=gene-CYJ03_RS03930;Dbxref=GenBank:WP_014614100.1;Name=WP_014614100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219879.1;locus_tag=CYJ03_RS03930;product=hypothetical protein;protein_id=WP_014614100.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	83678	84406	.	+	.	ID=gene-CYJ03_RS03935;Name=CYJ03_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03935;old_locus_tag=CYJ03_003925
NZ_PJUP02000007.1	Protein Homology	CDS	83678	84406	.	+	0	ID=cds-WP_100004241.1;Parent=gene-CYJ03_RS03935;Dbxref=GenBank:WP_100004241.1;Name=WP_100004241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729032.1;locus_tag=CYJ03_RS03935;product=hypothetical protein;protein_id=WP_100004241.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	84571	85203	.	-	.	ID=gene-CYJ03_RS03940;Name=CYJ03_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03940;old_locus_tag=CYJ03_003930
NZ_PJUP02000007.1	Protein Homology	CDS	84571	85203	.	-	0	ID=cds-WP_101457077.1;Parent=gene-CYJ03_RS03940;Dbxref=GenBank:WP_101457077.1;Name=WP_101457077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219877.1;locus_tag=CYJ03_RS03940;product=hypothetical protein;protein_id=WP_101457077.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	85430	88024	.	-	.	ID=gene-CYJ03_RS03945;Name=CYJ03_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03945;old_locus_tag=CYJ03_003935
NZ_PJUP02000007.1	Protein Homology	CDS	85430	88024	.	-	0	ID=cds-WP_104052179.1;Parent=gene-CYJ03_RS03945;Dbxref=GenBank:WP_104052179.1;Name=WP_104052179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729034.1;locus_tag=CYJ03_RS03945;product=YfhO family protein;protein_id=WP_104052179.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	88021	90630	.	-	.	ID=gene-CYJ03_RS03950;Name=CYJ03_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03950;old_locus_tag=CYJ03_003940
NZ_PJUP02000007.1	Protein Homology	CDS	88021	90630	.	-	0	ID=cds-WP_104052180.1;Parent=gene-CYJ03_RS03950;Dbxref=GenBank:WP_104052180.1;Name=WP_104052180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=CYJ03_RS03950;product=YfhO family protein;protein_id=WP_104052180.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	90650	91033	.	-	.	ID=gene-CYJ03_RS03955;Name=CYJ03_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03955;old_locus_tag=CYJ03_003945
NZ_PJUP02000007.1	Protein Homology	CDS	90650	91033	.	-	0	ID=cds-WP_015729036.1;Parent=gene-CYJ03_RS03955;Dbxref=GenBank:WP_015729036.1;Name=WP_015729036.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=CYJ03_RS03955;product=GtrA family protein;protein_id=WP_015729036.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	91261	92133	.	+	.	ID=gene-CYJ03_RS03960;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=CYJ03_RS03960;old_locus_tag=CYJ03_003950
NZ_PJUP02000007.1	Protein Homology	CDS	91261	92133	.	+	0	ID=cds-WP_015729037.1;Parent=gene-CYJ03_RS03960;Dbxref=GenBank:WP_015729037.1;Name=WP_015729037.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167874.1;locus_tag=CYJ03_RS03960;product=ribosome biogenesis GTPase YlqF;protein_id=WP_015729037.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	92126	92911	.	+	.	ID=gene-CYJ03_RS03965;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CYJ03_RS03965;old_locus_tag=CYJ03_003955
NZ_PJUP02000007.1	Protein Homology	CDS	92126	92911	.	+	0	ID=cds-WP_104052181.1;Parent=gene-CYJ03_RS03965;Dbxref=GenBank:WP_104052181.1;Name=WP_104052181.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=CYJ03_RS03965;product=ribonuclease HII;protein_id=WP_104052181.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	93003	93278	.	+	.	ID=gene-CYJ03_RS03970;Name=CYJ03_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03970;old_locus_tag=CYJ03_003960
NZ_PJUP02000007.1	Protein Homology	CDS	93003	93278	.	+	0	ID=cds-WP_015729039.1;Parent=gene-CYJ03_RS03970;Dbxref=GenBank:WP_015729039.1;Name=WP_015729039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614092.1;locus_tag=CYJ03_RS03970;product=hypothetical protein;protein_id=WP_015729039.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	93540	94706	.	+	.	ID=gene-CYJ03_RS03975;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CYJ03_RS03975;old_locus_tag=CYJ03_003965
NZ_PJUP02000007.1	Protein Homology	CDS	93540	94706	.	+	0	ID=cds-WP_015729040.1;Parent=gene-CYJ03_RS03975;Dbxref=GenBank:WP_015729040.1;Name=WP_015729040.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CYJ03_RS03975;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_015729040.1;transl_table=11
NZ_PJUP02000007.1	RefSeq	gene	94728	95633	.	+	.	ID=gene-CYJ03_RS03980;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CYJ03_RS03980;old_locus_tag=CYJ03_003970
NZ_PJUP02000007.1	Protein Homology	CDS	94728	95633	.	+	0	ID=cds-WP_014614090.1;Parent=gene-CYJ03_RS03980;Dbxref=GenBank:WP_014614090.1;Name=WP_014614090.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167870.1;locus_tag=CYJ03_RS03980;product=succinate--CoA ligase subunit alpha;protein_id=WP_014614090.1;transl_table=11
##sequence-region NZ_PJUP02000011.1 1 76844
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000011.1	RefSeq	region	1	76844	.	+	.	ID=NZ_PJUP02000011.1:1..76844;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000011.1	RefSeq	pseudogene	86	349	.	+	.	ID=gene-CYJ03_RS12550;Name=CYJ03_RS12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS12550;old_locus_tag=CYJ03_005185;partial=true;pseudo=true;start_range=.,86
NZ_PJUP02000011.1	Protein Homology	CDS	86	349	.	+	0	ID=cds-CYJ03_RS12550;Parent=gene-CYJ03_RS12550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219999.1;locus_tag=CYJ03_RS12550;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,86;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	459	1169	.	-	.	ID=gene-CYJ03_RS05200;Name=CYJ03_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05200;old_locus_tag=CYJ03_005190
NZ_PJUP02000011.1	Protein Homology	CDS	459	1169	.	-	0	ID=cds-WP_104052202.1;Parent=gene-CYJ03_RS05200;Dbxref=GenBank:WP_104052202.1;Name=WP_104052202.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614679.1;locus_tag=CYJ03_RS05200;product=trypsin-like serine peptidase;protein_id=WP_104052202.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	1375	2094	.	-	.	ID=gene-CYJ03_RS05205;Name=CYJ03_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05205;old_locus_tag=CYJ03_005195
NZ_PJUP02000011.1	Protein Homology	CDS	1375	2094	.	-	0	ID=cds-WP_037543868.1;Parent=gene-CYJ03_RS05205;Dbxref=GenBank:WP_037543868.1;Name=WP_037543868.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728668.1;locus_tag=CYJ03_RS05205;product=trypsin-like serine peptidase;protein_id=WP_037543868.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	2317	3024	.	-	.	ID=gene-CYJ03_RS05210;Name=CYJ03_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05210;old_locus_tag=CYJ03_005200
NZ_PJUP02000011.1	Protein Homology	CDS	2317	3024	.	-	0	ID=cds-WP_104052203.1;Parent=gene-CYJ03_RS05210;Dbxref=GenBank:WP_104052203.1;Name=WP_104052203.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728669.1;locus_tag=CYJ03_RS05210;product=trypsin-like serine peptidase;protein_id=WP_104052203.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	3244	3954	.	-	.	ID=gene-CYJ03_RS05215;Name=CYJ03_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05215;old_locus_tag=CYJ03_005205
NZ_PJUP02000011.1	Protein Homology	CDS	3244	3954	.	-	0	ID=cds-WP_096533124.1;Parent=gene-CYJ03_RS05215;Dbxref=GenBank:WP_096533124.1;Name=WP_096533124.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614677.1;locus_tag=CYJ03_RS05215;product=trypsin-like serine peptidase;protein_id=WP_096533124.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	4162	4917	.	-	.	ID=gene-CYJ03_RS05220;Name=CYJ03_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05220;old_locus_tag=CYJ03_005210
NZ_PJUP02000011.1	Protein Homology	CDS	4162	4917	.	-	0	ID=cds-WP_104052204.1;Parent=gene-CYJ03_RS05220;Dbxref=GenBank:WP_104052204.1;Name=WP_104052204.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614676.1;locus_tag=CYJ03_RS05220;product=trypsin-like serine peptidase;protein_id=WP_104052204.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	5281	6036	.	-	.	ID=gene-CYJ03_RS05225;Name=CYJ03_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05225;old_locus_tag=CYJ03_005215
NZ_PJUP02000011.1	Protein Homology	CDS	5281	6036	.	-	0	ID=cds-WP_014614675.1;Parent=gene-CYJ03_RS05225;Dbxref=GenBank:WP_014614675.1;Name=WP_014614675.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614675.1;locus_tag=CYJ03_RS05225;product=trypsin-like serine peptidase;protein_id=WP_014614675.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	6394	7101	.	-	.	ID=gene-CYJ03_RS05230;Name=CYJ03_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05230;old_locus_tag=CYJ03_005220
NZ_PJUP02000011.1	Protein Homology	CDS	6394	7101	.	-	0	ID=cds-WP_037543862.1;Parent=gene-CYJ03_RS05230;Dbxref=GenBank:WP_037543862.1;Name=WP_037543862.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614674.1;locus_tag=CYJ03_RS05230;product=trypsin-like serine peptidase;protein_id=WP_037543862.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	7440	8162	.	-	.	ID=gene-CYJ03_RS05235;Name=CYJ03_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05235;old_locus_tag=CYJ03_005225
NZ_PJUP02000011.1	Protein Homology	CDS	7440	8162	.	-	0	ID=cds-WP_104052205.1;Parent=gene-CYJ03_RS05235;Dbxref=GenBank:WP_104052205.1;Name=WP_104052205.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728674.1;locus_tag=CYJ03_RS05235;product=trypsin-like serine peptidase;protein_id=WP_104052205.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	8485	9210	.	-	.	ID=gene-CYJ03_RS05240;Name=CYJ03_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05240;old_locus_tag=CYJ03_005230
NZ_PJUP02000011.1	Protein Homology	CDS	8485	9210	.	-	0	ID=cds-WP_104052206.1;Parent=gene-CYJ03_RS05240;Dbxref=GenBank:WP_104052206.1;Name=WP_104052206.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728675.1;locus_tag=CYJ03_RS05240;product=trypsin-like serine peptidase;protein_id=WP_104052206.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	9377	10093	.	-	.	ID=gene-CYJ03_RS05245;Name=CYJ03_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05245;old_locus_tag=CYJ03_005235
NZ_PJUP02000011.1	Protein Homology	CDS	9377	10093	.	-	0	ID=cds-WP_100006738.1;Parent=gene-CYJ03_RS05245;Dbxref=GenBank:WP_100006738.1;Name=WP_100006738.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614672.1;locus_tag=CYJ03_RS05245;product=trypsin-like serine peptidase;protein_id=WP_100006738.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	10715	11050	.	+	.	ID=gene-CYJ03_RS05250;Name=CYJ03_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05250;old_locus_tag=CYJ03_005240
NZ_PJUP02000011.1	Protein Homology	CDS	10715	11050	.	+	0	ID=cds-WP_014614671.1;Parent=gene-CYJ03_RS05250;Dbxref=GenBank:WP_014614671.1;Name=WP_014614671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220022.1;locus_tag=CYJ03_RS05250;product=YuzB family protein;protein_id=WP_014614671.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	11460	11939	.	+	.	ID=gene-CYJ03_RS05255;Name=CYJ03_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05255;old_locus_tag=CYJ03_005245
NZ_PJUP02000011.1	Protein Homology	CDS	11460	11939	.	+	0	ID=cds-WP_014614670.1;Parent=gene-CYJ03_RS05255;Dbxref=GenBank:WP_014614670.1;Name=WP_014614670.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=CYJ03_RS05255;product=GNAT family N-acetyltransferase;protein_id=WP_014614670.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	11962	13260	.	+	.	ID=gene-CYJ03_RS05260;Name=CYJ03_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05260;old_locus_tag=CYJ03_005250
NZ_PJUP02000011.1	Protein Homology	CDS	11962	13260	.	+	0	ID=cds-WP_015728676.1;Parent=gene-CYJ03_RS05260;Dbxref=GenBank:WP_015728676.1;Name=WP_015728676.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=CYJ03_RS05260;product=HD domain-containing protein;protein_id=WP_015728676.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	13338	13853	.	+	.	ID=gene-CYJ03_RS05265;Name=CYJ03_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05265;old_locus_tag=CYJ03_005255
NZ_PJUP02000011.1	Protein Homology	CDS	13338	13853	.	+	0	ID=cds-WP_037543858.1;Parent=gene-CYJ03_RS05265;Dbxref=GenBank:WP_037543858.1;Name=WP_037543858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166270.1;locus_tag=CYJ03_RS05265;product=YwhD family protein;protein_id=WP_037543858.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	14069	14479	.	+	.	ID=gene-CYJ03_RS05270;Name=CYJ03_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05270;old_locus_tag=CYJ03_005260
NZ_PJUP02000011.1	Protein Homology	CDS	14069	14479	.	+	0	ID=cds-WP_014614667.1;Parent=gene-CYJ03_RS05270;Dbxref=GenBank:WP_014614667.1;Name=WP_014614667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220024.1;locus_tag=CYJ03_RS05270;product=YwiB family protein;protein_id=WP_014614667.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	14481	16139	.	+	.	ID=gene-CYJ03_RS05275;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CYJ03_RS05275;old_locus_tag=CYJ03_005265
NZ_PJUP02000011.1	Protein Homology	CDS	14481	16139	.	+	0	ID=cds-WP_015728677.1;Parent=gene-CYJ03_RS05275;Dbxref=GenBank:WP_015728677.1;Name=WP_015728677.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CYJ03_RS05275;product=arginine--tRNA ligase;protein_id=WP_015728677.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	pseudogene	16182	16822	.	-	.	ID=gene-CYJ03_RS05280;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=CYJ03_RS05280;old_locus_tag=CYJ03_005270;pseudo=true
NZ_PJUP02000011.1	Protein Homology	CDS	16182	16822	.	-	0	ID=cds-CYJ03_RS05280;Parent=gene-CYJ03_RS05280;Note=frameshifted;Ontology_term=GO:0043953,GO:0065002,GO:0009977,GO:0016020,GO:0033281;gbkey=CDS;gene=tatC;go_component=membrane|0016020||IEA,TAT protein transport complex|0033281||IEA;go_function=proton motive force dependent protein transmembrane transporter activity|0009977||IEA;go_process=protein transport by the Tat complex|0043953||IEA,intracellular protein transmembrane transport|0065002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532733.1;locus_tag=CYJ03_RS05280;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	16878	17099	.	-	.	ID=gene-CYJ03_RS05285;Name=CYJ03_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05285;old_locus_tag=CYJ03_005275
NZ_PJUP02000011.1	Protein Homology	CDS	16878	17099	.	-	0	ID=cds-WP_014614664.1;Parent=gene-CYJ03_RS05285;Dbxref=GenBank:WP_014614664.1;Name=WP_014614664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614664.1;locus_tag=CYJ03_RS05285;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_014614664.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	17673	18554	.	+	.	ID=gene-CYJ03_RS05290;Name=CYJ03_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05290;old_locus_tag=CYJ03_005280
NZ_PJUP02000011.1	Protein Homology	CDS	17673	18554	.	+	0	ID=cds-WP_101457530.1;Parent=gene-CYJ03_RS05290;Dbxref=GenBank:WP_101457530.1;Name=WP_101457530.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=CYJ03_RS05290;product=ABC transporter substrate-binding protein;protein_id=WP_101457530.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	18544	19494	.	+	.	ID=gene-CYJ03_RS05295;Name=CYJ03_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05295;old_locus_tag=CYJ03_005285
NZ_PJUP02000011.1	Protein Homology	CDS	18544	19494	.	+	0	ID=cds-WP_037543855.1;Parent=gene-CYJ03_RS05295;Dbxref=GenBank:WP_037543855.1;Name=WP_037543855.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=CYJ03_RS05295;product=FecCD family ABC transporter permease;protein_id=WP_037543855.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	19551	20255	.	+	.	ID=gene-CYJ03_RS05300;Name=CYJ03_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05300;old_locus_tag=CYJ03_005290
NZ_PJUP02000011.1	Protein Homology	CDS	19551	20255	.	+	0	ID=cds-WP_014614661.1;Parent=gene-CYJ03_RS05300;Dbxref=GenBank:WP_014614661.1;Name=WP_014614661.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=CYJ03_RS05300;product=HAD family hydrolase;protein_id=WP_014614661.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	20255	21055	.	+	.	ID=gene-CYJ03_RS05305;Name=CYJ03_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05305;old_locus_tag=CYJ03_005295
NZ_PJUP02000011.1	Protein Homology	CDS	20255	21055	.	+	0	ID=cds-WP_014614660.1;Parent=gene-CYJ03_RS05305;Dbxref=GenBank:WP_014614660.1;Name=WP_014614660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728680.1;locus_tag=CYJ03_RS05305;product=alpha/beta fold hydrolase;protein_id=WP_014614660.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	21147	21650	.	+	.	ID=gene-CYJ03_RS05310;Name=CYJ03_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05310;old_locus_tag=CYJ03_005300
NZ_PJUP02000011.1	Protein Homology	CDS	21147	21650	.	+	0	ID=cds-WP_014614659.1;Parent=gene-CYJ03_RS05310;Dbxref=GenBank:WP_014614659.1;Name=WP_014614659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167340.1;locus_tag=CYJ03_RS05310;product=SA0570 family protein;protein_id=WP_014614659.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	21739	22455	.	+	.	ID=gene-CYJ03_RS05315;Name=CYJ03_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05315;old_locus_tag=CYJ03_005305
NZ_PJUP02000011.1	Protein Homology	CDS	21739	22455	.	+	0	ID=cds-WP_101457528.1;Parent=gene-CYJ03_RS05315;Dbxref=GenBank:WP_101457528.1;Name=WP_101457528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614658.1;locus_tag=CYJ03_RS05315;product=hypothetical protein;protein_id=WP_101457528.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	22666	23037	.	-	.	ID=gene-CYJ03_RS05320;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05320;old_locus_tag=CYJ03_005310
NZ_PJUP02000011.1	Protein Homology	CDS	22666	23037	.	-	0	ID=cds-WP_101457527.1;Parent=gene-CYJ03_RS05320;Dbxref=GenBank:WP_101457527.1;Name=WP_101457527.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=CYJ03_RS05320;product=global transcriptional regulator SarA;protein_id=WP_101457527.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	24533	25462	.	-	.	ID=gene-CYJ03_RS05325;Name=CYJ03_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05325;old_locus_tag=CYJ03_005315
NZ_PJUP02000011.1	Protein Homology	CDS	24533	25462	.	-	0	ID=cds-WP_063278866.1;Parent=gene-CYJ03_RS05325;Dbxref=GenBank:WP_063278866.1;Name=WP_063278866.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=CYJ03_RS05325;product=DMT family transporter;protein_id=WP_063278866.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	25676	25945	.	+	.	ID=gene-CYJ03_RS05330;Name=CYJ03_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05330;old_locus_tag=CYJ03_005320
NZ_PJUP02000011.1	Protein Homology	CDS	25676	25945	.	+	0	ID=cds-WP_063284880.1;Parent=gene-CYJ03_RS05330;Dbxref=GenBank:WP_063284880.1;Name=WP_063284880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728682.1;locus_tag=CYJ03_RS05330;product=hypothetical protein;protein_id=WP_063284880.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	26286	26501	.	-	.	ID=gene-CYJ03_RS05335;Name=CYJ03_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05335;old_locus_tag=CYJ03_005325
NZ_PJUP02000011.1	Protein Homology	CDS	26286	26501	.	-	0	ID=cds-WP_014614654.1;Parent=gene-CYJ03_RS05335;Dbxref=GenBank:WP_014614654.1;Name=WP_014614654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167335.1;locus_tag=CYJ03_RS05335;product=DUF2922 domain-containing protein;protein_id=WP_014614654.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	26517	26720	.	-	.	ID=gene-CYJ03_RS05340;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05340;old_locus_tag=CYJ03_005330
NZ_PJUP02000011.1	Protein Homology	CDS	26517	26720	.	-	0	ID=cds-WP_014614653.1;Parent=gene-CYJ03_RS05340;Dbxref=GenBank:WP_014614653.1;Name=WP_014614653.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=CYJ03_RS05340;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_014614653.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	26863	27414	.	+	.	ID=gene-CYJ03_RS05345;Name=CYJ03_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05345;old_locus_tag=CYJ03_005335
NZ_PJUP02000011.1	Protein Homology	CDS	26863	27414	.	+	0	ID=cds-WP_015728683.1;Parent=gene-CYJ03_RS05345;Dbxref=GenBank:WP_015728683.1;Name=WP_015728683.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=CYJ03_RS05345;product=tyrosine-type recombinase/integrase;protein_id=WP_015728683.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	27436	29826	.	+	.	ID=gene-CYJ03_RS05350;Name=CYJ03_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05350;old_locus_tag=CYJ03_005340
NZ_PJUP02000011.1	Protein Homology	CDS	27436	29826	.	+	0	ID=cds-WP_101457483.1;Parent=gene-CYJ03_RS05350;Dbxref=GenBank:WP_101457483.1;Name=WP_101457483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167332.1;locus_tag=CYJ03_RS05350;product=DUF4040 family protein;protein_id=WP_101457483.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	29813	30238	.	+	.	ID=gene-CYJ03_RS05355;Name=CYJ03_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05355;old_locus_tag=CYJ03_005345
NZ_PJUP02000011.1	Protein Homology	CDS	29813	30238	.	+	0	ID=cds-WP_014614650.1;Parent=gene-CYJ03_RS05355;Dbxref=GenBank:WP_014614650.1;Name=WP_014614650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=CYJ03_RS05355;product=monovalent cation/H+ antiporter subunit B;protein_id=WP_014614650.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	30235	30579	.	+	.	ID=gene-CYJ03_RS05360;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=CYJ03_RS05360;old_locus_tag=CYJ03_005350
NZ_PJUP02000011.1	Protein Homology	CDS	30235	30579	.	+	0	ID=cds-WP_014614649.1;Parent=gene-CYJ03_RS05360;Dbxref=GenBank:WP_014614649.1;Name=WP_014614649.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451046.1;locus_tag=CYJ03_RS05360;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_014614649.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	30572	32071	.	+	.	ID=gene-CYJ03_RS05365;Name=CYJ03_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05365;old_locus_tag=CYJ03_005355
NZ_PJUP02000011.1	Protein Homology	CDS	30572	32071	.	+	0	ID=cds-WP_101457482.1;Parent=gene-CYJ03_RS05365;Dbxref=GenBank:WP_101457482.1;Name=WP_101457482.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166250.1;locus_tag=CYJ03_RS05365;product=Na+/H+ antiporter subunit D;protein_id=WP_101457482.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	32072	32554	.	+	.	ID=gene-CYJ03_RS05370;Name=CYJ03_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05370;old_locus_tag=CYJ03_005360
NZ_PJUP02000011.1	Protein Homology	CDS	32072	32554	.	+	0	ID=cds-WP_101457481.1;Parent=gene-CYJ03_RS05370;Dbxref=GenBank:WP_101457481.1;Name=WP_101457481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898376.1;locus_tag=CYJ03_RS05370;product=Na+/H+ antiporter subunit E;protein_id=WP_101457481.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	32551	32844	.	+	.	ID=gene-CYJ03_RS05375;Name=CYJ03_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05375;old_locus_tag=CYJ03_005365
NZ_PJUP02000011.1	Protein Homology	CDS	32551	32844	.	+	0	ID=cds-WP_014614646.1;Parent=gene-CYJ03_RS05375;Dbxref=GenBank:WP_014614646.1;Name=WP_014614646.1;Ontology_term=GO:0034220,GO:0015075,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167327.1;locus_tag=CYJ03_RS05375;product=monovalent cation/H+ antiporter complex subunit F;protein_id=WP_014614646.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	32828	33274	.	+	.	ID=gene-CYJ03_RS05380;Name=CYJ03_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05380;old_locus_tag=CYJ03_005370
NZ_PJUP02000011.1	Protein Homology	CDS	32828	33274	.	+	0	ID=cds-WP_014614645.1;Parent=gene-CYJ03_RS05380;Dbxref=GenBank:WP_014614645.1;Name=WP_014614645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614645.1;locus_tag=CYJ03_RS05380;product=Na+/H+ antiporter subunit G;protein_id=WP_014614645.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	33676	33831	.	+	.	ID=gene-CYJ03_RS12280;Name=CYJ03_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12280
NZ_PJUP02000011.1	GeneMarkS-2+	CDS	33676	33831	.	+	0	ID=cds-WP_158304579.1;Parent=gene-CYJ03_RS12280;Dbxref=GenBank:WP_158304579.1;Name=WP_158304579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CYJ03_RS12280;product=hypothetical protein;protein_id=WP_158304579.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	34243	35160	.	-	.	ID=gene-CYJ03_RS05385;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=CYJ03_RS05385;old_locus_tag=CYJ03_005375
NZ_PJUP02000011.1	Protein Homology	CDS	34243	35160	.	-	0	ID=cds-WP_037544291.1;Parent=gene-CYJ03_RS05385;Dbxref=GenBank:WP_037544291.1;Name=WP_037544291.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501435.1;locus_tag=CYJ03_RS05385;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037544291.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	35160	35999	.	-	.	ID=gene-CYJ03_RS05390;Name=CYJ03_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05390;old_locus_tag=CYJ03_005380
NZ_PJUP02000011.1	Protein Homology	CDS	35160	35999	.	-	0	ID=cds-WP_014614643.1;Parent=gene-CYJ03_RS05390;Dbxref=GenBank:WP_014614643.1;Name=WP_014614643.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=CYJ03_RS05390;product=metal ABC transporter permease;protein_id=WP_014614643.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	35974	36750	.	-	.	ID=gene-CYJ03_RS05395;Name=CYJ03_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05395;old_locus_tag=CYJ03_005385
NZ_PJUP02000011.1	Protein Homology	CDS	35974	36750	.	-	0	ID=cds-WP_014614642.1;Parent=gene-CYJ03_RS05395;Dbxref=GenBank:WP_014614642.1;Name=WP_014614642.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167322.1;locus_tag=CYJ03_RS05395;product=metal ABC transporter ATP-binding protein;protein_id=WP_014614642.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	36872	37519	.	+	.	ID=gene-CYJ03_RS05400;Name=CYJ03_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05400;old_locus_tag=CYJ03_005390
NZ_PJUP02000011.1	Protein Homology	CDS	36872	37519	.	+	0	ID=cds-WP_014614641.1;Parent=gene-CYJ03_RS05400;Dbxref=GenBank:WP_014614641.1;Name=WP_014614641.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220035.1;locus_tag=CYJ03_RS05400;product=metal-dependent transcriptional regulator;protein_id=WP_014614641.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	37915	38913	.	-	.	ID=gene-CYJ03_RS05405;Name=CYJ03_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05405;old_locus_tag=CYJ03_005395
NZ_PJUP02000011.1	Protein Homology	CDS	37915	38913	.	-	0	ID=cds-WP_015728687.1;Parent=gene-CYJ03_RS05405;Dbxref=GenBank:WP_015728687.1;Name=WP_015728687.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191473.1;locus_tag=CYJ03_RS05405;product=FecCD family ABC transporter permease;protein_id=WP_015728687.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	38910	39905	.	-	.	ID=gene-CYJ03_RS05410;Name=CYJ03_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05410;old_locus_tag=CYJ03_005400
NZ_PJUP02000011.1	Protein Homology	CDS	38910	39905	.	-	0	ID=cds-WP_020220036.1;Parent=gene-CYJ03_RS05410;Dbxref=GenBank:WP_020220036.1;Name=WP_020220036.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580228.1;locus_tag=CYJ03_RS05410;product=FecCD family ABC transporter permease;protein_id=WP_020220036.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	39922	40905	.	-	.	ID=gene-CYJ03_RS05415;Name=CYJ03_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05415;old_locus_tag=CYJ03_005405
NZ_PJUP02000011.1	Protein Homology	CDS	39922	40905	.	-	0	ID=cds-WP_014614638.1;Parent=gene-CYJ03_RS05415;Dbxref=GenBank:WP_014614638.1;Name=WP_014614638.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728689.1;locus_tag=CYJ03_RS05415;product=ABC transporter substrate-binding protein;protein_id=WP_014614638.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	41142	42119	.	+	.	ID=gene-CYJ03_RS05420;Name=sbnA;gbkey=Gene;gene=sbnA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05420;old_locus_tag=CYJ03_005410
NZ_PJUP02000011.1	Protein Homology	CDS	41142	42119	.	+	0	ID=cds-WP_104052207.1;Parent=gene-CYJ03_RS05420;Dbxref=GenBank:WP_104052207.1;Name=WP_104052207.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=sbnA;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614637.1;locus_tag=CYJ03_RS05420;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=WP_104052207.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	42121	43131	.	+	.	ID=gene-CYJ03_RS05425;Name=sbnB;gbkey=Gene;gene=sbnB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05425;old_locus_tag=CYJ03_005415
NZ_PJUP02000011.1	Protein Homology	CDS	42121	43131	.	+	0	ID=cds-WP_014614636.1;Parent=gene-CYJ03_RS05425;Dbxref=GenBank:WP_014614636.1;Name=WP_014614636.1;Ontology_term=GO:0019290,GO:0016491;gbkey=CDS;gene=sbnB;go_function=oxidoreductase activity|0016491||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614636.1;locus_tag=CYJ03_RS05425;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=WP_014614636.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	43143	44918	.	+	.	ID=gene-CYJ03_RS05430;Name=sbnC;gbkey=Gene;gene=sbnC;gene_biotype=protein_coding;locus_tag=CYJ03_RS05430;old_locus_tag=CYJ03_005420
NZ_PJUP02000011.1	Protein Homology	CDS	43143	44918	.	+	0	ID=cds-WP_104052208.1;Parent=gene-CYJ03_RS05430;Dbxref=GenBank:WP_104052208.1;Name=WP_104052208.1;gbkey=CDS;gene=sbnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728691.1;locus_tag=CYJ03_RS05430;product=staphyloferrin B biosynthesis protein SbnC;protein_id=WP_104052208.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	44893	46152	.	+	.	ID=gene-CYJ03_RS05435;Name=CYJ03_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05435;old_locus_tag=CYJ03_005425
NZ_PJUP02000011.1	Protein Homology	CDS	44893	46152	.	+	0	ID=cds-WP_258058099.1;Parent=gene-CYJ03_RS05435;Dbxref=GenBank:WP_258058099.1;Name=WP_258058099.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166234.1;locus_tag=CYJ03_RS05435;product=MFS transporter;protein_id=WP_258058099.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	46139	47857	.	+	.	ID=gene-CYJ03_RS05440;Name=CYJ03_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05440;old_locus_tag=CYJ03_005430
NZ_PJUP02000011.1	Protein Homology	CDS	46139	47857	.	+	0	ID=cds-WP_104052210.1;Parent=gene-CYJ03_RS05440;Dbxref=GenBank:WP_104052210.1;Name=WP_104052210.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728692.1;locus_tag=CYJ03_RS05440;product=IucA/IucC family protein;protein_id=WP_104052210.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	47841	49595	.	+	.	ID=gene-CYJ03_RS05445;Name=sbnF;gbkey=Gene;gene=sbnF;gene_biotype=protein_coding;locus_tag=CYJ03_RS05445;old_locus_tag=CYJ03_005435
NZ_PJUP02000011.1	Protein Homology	CDS	47841	49595	.	+	0	ID=cds-WP_037543836.1;Parent=gene-CYJ03_RS05445;Dbxref=GenBank:WP_037543836.1;Name=WP_037543836.1;gbkey=CDS;gene=sbnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614632.1;locus_tag=CYJ03_RS05445;product=staphyloferrin B biosynthesis protein SbnF;protein_id=WP_037543836.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	49592	50386	.	+	.	ID=gene-CYJ03_RS05450;Name=CYJ03_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05450;old_locus_tag=CYJ03_005440
NZ_PJUP02000011.1	Protein Homology	CDS	49592	50386	.	+	0	ID=cds-WP_015728694.1;Parent=gene-CYJ03_RS05450;Dbxref=GenBank:WP_015728694.1;Name=WP_015728694.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728694.1;locus_tag=CYJ03_RS05450;product=HpcH/HpaI aldolase family protein;protein_id=WP_015728694.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	50361	51563	.	+	.	ID=gene-CYJ03_RS05455;Name=CYJ03_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05455;old_locus_tag=CYJ03_005445
NZ_PJUP02000011.1	Protein Homology	CDS	50361	51563	.	+	0	ID=cds-WP_104052211.1;Parent=gene-CYJ03_RS05455;Dbxref=GenBank:WP_104052211.1;Name=WP_104052211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614630.1;locus_tag=CYJ03_RS05455;product=type III PLP-dependent enzyme;protein_id=WP_104052211.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	51560	52324	.	+	.	ID=gene-CYJ03_RS05460;Name=sbnI;gbkey=Gene;gene=sbnI;gene_biotype=protein_coding;locus_tag=CYJ03_RS05460;old_locus_tag=CYJ03_005450
NZ_PJUP02000011.1	Protein Homology	CDS	51560	52324	.	+	0	ID=cds-WP_096636572.1;Parent=gene-CYJ03_RS05460;Dbxref=GenBank:WP_096636572.1;Name=WP_096636572.1;gbkey=CDS;gene=sbnI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166229.1;locus_tag=CYJ03_RS05460;product=bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI;protein_id=WP_096636572.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	52606	53349	.	-	.	ID=gene-CYJ03_RS05465;Name=CYJ03_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05465;old_locus_tag=CYJ03_005455
NZ_PJUP02000011.1	Protein Homology	CDS	52606	53349	.	-	0	ID=cds-WP_037543834.1;Parent=gene-CYJ03_RS05465;Dbxref=GenBank:WP_037543834.1;Name=WP_037543834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728697.1;locus_tag=CYJ03_RS05465;product=M50 family metallopeptidase;protein_id=WP_037543834.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	53423	53833	.	-	.	ID=gene-CYJ03_RS05470;Name=CYJ03_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05470;old_locus_tag=CYJ03_005460
NZ_PJUP02000011.1	Protein Homology	CDS	53423	53833	.	-	0	ID=cds-WP_225549913.1;Parent=gene-CYJ03_RS05470;Dbxref=GenBank:WP_225549913.1;Name=WP_225549913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220039.1;locus_tag=CYJ03_RS05470;product=LbetaH domain-containing protein;protein_id=WP_225549913.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	54215	55036	.	+	.	ID=gene-CYJ03_RS05475;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=CYJ03_RS05475;old_locus_tag=CYJ03_005465
NZ_PJUP02000011.1	Protein Homology	CDS	54215	55036	.	+	0	ID=cds-WP_104052212.1;Parent=gene-CYJ03_RS05475;Dbxref=GenBank:WP_104052212.1;Name=WP_104052212.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728699.1;locus_tag=CYJ03_RS05475;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_104052212.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	55250	56044	.	-	.	ID=gene-CYJ03_RS05480;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CYJ03_RS05480;old_locus_tag=CYJ03_005470
NZ_PJUP02000011.1	Protein Homology	CDS	55250	56044	.	-	0	ID=cds-WP_014614625.1;Parent=gene-CYJ03_RS05480;Dbxref=GenBank:WP_014614625.1;Name=WP_014614625.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CYJ03_RS05480;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_014614625.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	56323	57126	.	+	.	ID=gene-CYJ03_RS05485;Name=CYJ03_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05485;old_locus_tag=CYJ03_005475
NZ_PJUP02000011.1	Protein Homology	CDS	56323	57126	.	+	0	ID=cds-WP_014614624.1;Parent=gene-CYJ03_RS05485;Dbxref=GenBank:WP_014614624.1;Name=WP_014614624.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=CYJ03_RS05485;product=ABC transporter permease;protein_id=WP_014614624.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	57201	58292	.	+	.	ID=gene-CYJ03_RS05490;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05490;old_locus_tag=CYJ03_005480
NZ_PJUP02000011.1	Protein Homology	CDS	57201	58292	.	+	0	ID=cds-WP_014614623.1;Parent=gene-CYJ03_RS05490;Dbxref=GenBank:WP_014614623.1;Name=WP_014614623.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=CYJ03_RS05490;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_014614623.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	58386	58784	.	+	.	ID=gene-CYJ03_RS05495;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CYJ03_RS05495;old_locus_tag=CYJ03_005485
NZ_PJUP02000011.1	Protein Homology	CDS	58386	58784	.	+	0	ID=cds-WP_014614622.1;Parent=gene-CYJ03_RS05495;Dbxref=GenBank:WP_014614622.1;Name=WP_014614622.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CYJ03_RS05495;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_014614622.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	59927	60121	.	+	.	ID=gene-CYJ03_RS05500;Name=CYJ03_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05500;old_locus_tag=CYJ03_005490
NZ_PJUP02000011.1	Protein Homology	CDS	59927	60121	.	+	0	ID=cds-WP_014614621.1;Parent=gene-CYJ03_RS05500;Dbxref=GenBank:WP_014614621.1;Name=WP_014614621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614621.1;locus_tag=CYJ03_RS05500;product=hypothetical protein;protein_id=WP_014614621.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	60121	61323	.	+	.	ID=gene-CYJ03_RS05505;Name=CYJ03_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05505;old_locus_tag=CYJ03_005495
NZ_PJUP02000011.1	Protein Homology	CDS	60121	61323	.	+	0	ID=cds-WP_104052213.1;Parent=gene-CYJ03_RS05505;Dbxref=GenBank:WP_104052213.1;Name=WP_104052213.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728701.1;locus_tag=CYJ03_RS05505;product=MFS transporter;protein_id=WP_104052213.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	61982	63259	.	-	.	ID=gene-CYJ03_RS05510;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=CYJ03_RS05510;old_locus_tag=CYJ03_005500
NZ_PJUP02000011.1	Protein Homology	CDS	61982	63259	.	-	0	ID=cds-WP_104052214.1;Parent=gene-CYJ03_RS05510;Dbxref=GenBank:WP_104052214.1;Name=WP_104052214.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166222.1;locus_tag=CYJ03_RS05510;product=penicillin-binding protein PBP4;protein_id=WP_104052214.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	63534	65288	.	+	.	ID=gene-CYJ03_RS05515;Name=CYJ03_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05515;old_locus_tag=CYJ03_005505
NZ_PJUP02000011.1	Protein Homology	CDS	63534	65288	.	+	0	ID=cds-WP_014614617.1;Parent=gene-CYJ03_RS05515;Dbxref=GenBank:WP_014614617.1;Name=WP_014614617.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=CYJ03_RS05515;product=ABC transporter ATP-binding protein;protein_id=WP_014614617.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	65446	65610	.	-	.	ID=gene-CYJ03_RS05520;Name=CYJ03_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05520;old_locus_tag=CYJ03_005510
NZ_PJUP02000011.1	Protein Homology	CDS	65446	65610	.	-	0	ID=cds-WP_370863448.1;Parent=gene-CYJ03_RS05520;Dbxref=GenBank:WP_370863448.1;Name=WP_370863448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024081.7;locus_tag=CYJ03_RS05520;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_370863448.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	65617	67611	.	-	.	ID=gene-CYJ03_RS05525;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CYJ03_RS05525;old_locus_tag=CYJ03_005515
NZ_PJUP02000011.1	Protein Homology	CDS	65617	67611	.	-	0	ID=cds-WP_104052215.1;Parent=gene-CYJ03_RS05525;Dbxref=GenBank:WP_104052215.1;Name=WP_104052215.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728703.1;locus_tag=CYJ03_RS05525;product=ferrous iron transport protein B;protein_id=WP_104052215.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	67604	67840	.	-	.	ID=gene-CYJ03_RS05530;Name=CYJ03_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05530;old_locus_tag=CYJ03_005520
NZ_PJUP02000011.1	Protein Homology	CDS	67604	67840	.	-	0	ID=cds-WP_014614614.1;Parent=gene-CYJ03_RS05530;Dbxref=GenBank:WP_014614614.1;Name=WP_014614614.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=CYJ03_RS05530;product=FeoA family protein;protein_id=WP_014614614.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	68116	69342	.	+	.	ID=gene-CYJ03_RS05535;Name=CYJ03_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05535;old_locus_tag=CYJ03_005525
NZ_PJUP02000011.1	Protein Homology	CDS	68116	69342	.	+	0	ID=cds-WP_020220157.1;Parent=gene-CYJ03_RS05535;Dbxref=GenBank:WP_020220157.1;Name=WP_020220157.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=CYJ03_RS05535;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_020220157.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	69816	70649	.	+	.	ID=gene-CYJ03_RS05540;Name=CYJ03_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05540;old_locus_tag=CYJ03_005530
NZ_PJUP02000011.1	Protein Homology	CDS	69816	70649	.	+	0	ID=cds-WP_096636579.1;Parent=gene-CYJ03_RS05540;Dbxref=GenBank:WP_096636579.1;Name=WP_096636579.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=CYJ03_RS05540;product=YitT family protein;protein_id=WP_096636579.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	71016	71819	.	+	.	ID=gene-CYJ03_RS05545;Name=CYJ03_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05545;old_locus_tag=CYJ03_005535
NZ_PJUP02000011.1	Protein Homology	CDS	71016	71819	.	+	0	ID=cds-WP_014614611.1;Parent=gene-CYJ03_RS05545;Dbxref=GenBank:WP_014614611.1;Name=WP_014614611.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166215.1;locus_tag=CYJ03_RS05545;product=ABC transporter ATP-binding protein;protein_id=WP_014614611.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	71845	72849	.	+	.	ID=gene-CYJ03_RS05550;Name=CYJ03_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05550;old_locus_tag=CYJ03_005540
NZ_PJUP02000011.1	Protein Homology	CDS	71845	72849	.	+	0	ID=cds-WP_014614610.1;Parent=gene-CYJ03_RS05550;Dbxref=GenBank:WP_014614610.1;Name=WP_014614610.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168605.1;locus_tag=CYJ03_RS05550;product=FecCD family ABC transporter permease;protein_id=WP_014614610.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	72846	73862	.	+	.	ID=gene-CYJ03_RS05555;Name=CYJ03_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05555;old_locus_tag=CYJ03_005545
NZ_PJUP02000011.1	Protein Homology	CDS	72846	73862	.	+	0	ID=cds-WP_065354541.1;Parent=gene-CYJ03_RS05555;Dbxref=GenBank:WP_065354541.1;Name=WP_065354541.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=CYJ03_RS05555;product=FecCD family ABC transporter permease;protein_id=WP_065354541.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	74029	74526	.	+	.	ID=gene-CYJ03_RS05560;Name=CYJ03_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05560;old_locus_tag=CYJ03_005550
NZ_PJUP02000011.1	Protein Homology	CDS	74029	74526	.	+	0	ID=cds-WP_014614608.1;Parent=gene-CYJ03_RS05560;Dbxref=GenBank:WP_014614608.1;Name=WP_014614608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614608.1;locus_tag=CYJ03_RS05560;product=hypothetical protein;protein_id=WP_014614608.1;transl_table=11
NZ_PJUP02000011.1	RefSeq	gene	74811	76259	.	+	.	ID=gene-CYJ03_RS05565;Name=CYJ03_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS05565;old_locus_tag=CYJ03_005555
NZ_PJUP02000011.1	Protein Homology	CDS	74811	76259	.	+	0	ID=cds-WP_104052216.1;Parent=gene-CYJ03_RS05565;Dbxref=GenBank:WP_104052216.1;Name=WP_104052216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614607.1;locus_tag=CYJ03_RS05565;product=MDR family MFS transporter;protein_id=WP_104052216.1;transl_table=11
##sequence-region NZ_PJUP02000008.1 1 87816
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=283734
NZ_PJUP02000008.1	RefSeq	region	1	87816	.	+	.	ID=NZ_PJUP02000008.1:1..87816;Dbxref=taxon:283734;collection-date=2015;country=Botswana;gbkey=Src;genome=genomic;isolation-source=nasal swab from healthy carrier;mol_type=genomic DNA;nat-host=dog;strain=117N
NZ_PJUP02000008.1	RefSeq	pseudogene	184	438	.	-	.	ID=gene-CYJ03_RS03985;Name=CYJ03_RS03985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CYJ03_RS03985;old_locus_tag=CYJ03_003975;partial=true;pseudo=true;start_range=.,184
NZ_PJUP02000008.1	Protein Homology	CDS	184	438	.	-	0	ID=cds-CYJ03_RS03985;Parent=gene-CYJ03_RS03985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006400,GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=CYJ03_RS03985;partial=true;product=THUMP domain-containing protein;pseudo=true;start_range=.,184;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	435	1571	.	-	.	ID=gene-CYJ03_RS03990;Name=CYJ03_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS03990;old_locus_tag=CYJ03_003980
NZ_PJUP02000008.1	Protein Homology	CDS	435	1571	.	-	0	ID=cds-WP_065354171.1;Parent=gene-CYJ03_RS03990;Dbxref=GenBank:WP_065354171.1;Name=WP_065354171.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=CYJ03_RS03990;product=cysteine desulfurase family protein;protein_id=WP_065354171.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	1796	3496	.	-	.	ID=gene-CYJ03_RS03995;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=CYJ03_RS03995;old_locus_tag=CYJ03_003985
NZ_PJUP02000008.1	Protein Homology	CDS	1796	3496	.	-	0	ID=cds-WP_014613656.1;Parent=gene-CYJ03_RS03995;Dbxref=GenBank:WP_014613656.1;Name=WP_014613656.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613656.1;locus_tag=CYJ03_RS03995;product=septation ring formation regulator EzrA;protein_id=WP_014613656.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	3679	4134	.	+	.	ID=gene-CYJ03_RS04000;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04000;old_locus_tag=CYJ03_003990
NZ_PJUP02000008.1	Protein Homology	CDS	3679	4134	.	+	0	ID=cds-WP_063278930.1;Parent=gene-CYJ03_RS04000;Dbxref=GenBank:WP_063278930.1;Name=WP_063278930.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613655.1;locus_tag=CYJ03_RS04000;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_063278930.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	4369	4971	.	+	.	ID=gene-CYJ03_RS04005;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04005;old_locus_tag=CYJ03_003995
NZ_PJUP02000008.1	Protein Homology	CDS	4369	4971	.	+	0	ID=cds-WP_014613654.1;Parent=gene-CYJ03_RS04005;Dbxref=GenBank:WP_014613654.1;Name=WP_014613654.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CYJ03_RS04005;product=30S ribosomal protein S4;protein_id=WP_014613654.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	5025	5273	.	-	.	ID=gene-CYJ03_RS04010;Name=CYJ03_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04010;old_locus_tag=CYJ03_004000
NZ_PJUP02000008.1	Protein Homology	CDS	5025	5273	.	-	0	ID=cds-WP_226957565.1;Parent=gene-CYJ03_RS04010;Dbxref=GenBank:WP_226957565.1;Name=WP_226957565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165369.1;locus_tag=CYJ03_RS04010;product=hypothetical protein;protein_id=WP_226957565.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	5291	5860	.	-	.	ID=gene-CYJ03_RS04015;Name=CYJ03_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04015;old_locus_tag=CYJ03_004005
NZ_PJUP02000008.1	Protein Homology	CDS	5291	5860	.	-	0	ID=cds-WP_104052182.1;Parent=gene-CYJ03_RS04015;Dbxref=GenBank:WP_104052182.1;Name=WP_104052182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729311.1;locus_tag=CYJ03_RS04015;product=DUF4355 domain-containing protein;protein_id=WP_104052182.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	6053	6796	.	-	.	ID=gene-CYJ03_RS04020;Name=CYJ03_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04020;old_locus_tag=CYJ03_004010
NZ_PJUP02000008.1	Protein Homology	CDS	6053	6796	.	-	0	ID=cds-WP_015729316.1;Parent=gene-CYJ03_RS04020;Dbxref=GenBank:WP_015729316.1;Name=WP_015729316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015598.7;locus_tag=CYJ03_RS04020;product=MAP domain-containing protein;protein_id=WP_015729316.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	7133	7336	.	-	.	ID=gene-CYJ03_RS12530;Name=CYJ03_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12530;old_locus_tag=CYJ03_004015
NZ_PJUP02000008.1	Protein Homology	CDS	7133	7336	.	-	0	ID=cds-WP_065354722.1;Parent=gene-CYJ03_RS12530;Dbxref=GenBank:WP_065354722.1;Name=WP_065354722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613647.1;locus_tag=CYJ03_RS12530;product=hypothetical protein;protein_id=WP_065354722.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	7549	7662	.	+	.	ID=gene-CYJ03_RS12535;Name=CYJ03_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS12535
NZ_PJUP02000008.1	Protein Homology	CDS	7549	7662	.	+	0	ID=cds-WP_257975650.1;Parent=gene-CYJ03_RS12535;Dbxref=GenBank:WP_257975650.1;Name=WP_257975650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04450.1;locus_tag=CYJ03_RS12535;product=putative immunity/bacteriocin fusion bifunctional protein;protein_id=WP_257975650.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	8170	9123	.	+	.	ID=gene-CYJ03_RS04030;Name=CYJ03_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04030;old_locus_tag=CYJ03_004020
NZ_PJUP02000008.1	Protein Homology	CDS	8170	9123	.	+	0	ID=cds-WP_065354721.1;Parent=gene-CYJ03_RS04030;Dbxref=GenBank:WP_065354721.1;Name=WP_065354721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219643.1;locus_tag=CYJ03_RS04030;product=ornithine cyclodeaminase family protein;protein_id=WP_065354721.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	9173	9919	.	-	.	ID=gene-CYJ03_RS04035;Name=CYJ03_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04035;old_locus_tag=CYJ03_004025
NZ_PJUP02000008.1	Protein Homology	CDS	9173	9919	.	-	0	ID=cds-WP_015729319.1;Parent=gene-CYJ03_RS04035;Dbxref=GenBank:WP_015729319.1;Name=WP_015729319.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613645.1;locus_tag=CYJ03_RS04035;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015729319.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	9994	10452	.	+	.	ID=gene-CYJ03_RS04040;Name=CYJ03_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04040;old_locus_tag=CYJ03_004030
NZ_PJUP02000008.1	Protein Homology	CDS	9994	10452	.	+	0	ID=cds-WP_015729320.1;Parent=gene-CYJ03_RS04040;Dbxref=GenBank:WP_015729320.1;Name=WP_015729320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=CYJ03_RS04040;product=SACOL1771 family peroxiredoxin;protein_id=WP_015729320.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	10613	11773	.	+	.	ID=gene-CYJ03_RS04045;Name=CYJ03_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04045;old_locus_tag=CYJ03_004035
NZ_PJUP02000008.1	Protein Homology	CDS	10613	11773	.	+	0	ID=cds-WP_014613643.1;Parent=gene-CYJ03_RS04045;Dbxref=GenBank:WP_014613643.1;Name=WP_014613643.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=CYJ03_RS04045;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_014613643.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	11763	13358	.	+	.	ID=gene-CYJ03_RS04050;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04050;old_locus_tag=CYJ03_004040
NZ_PJUP02000008.1	Protein Homology	CDS	11763	13358	.	+	0	ID=cds-WP_104052183.1;Parent=gene-CYJ03_RS04050;Dbxref=GenBank:WP_104052183.1;Name=WP_104052183.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165053.1;locus_tag=CYJ03_RS04050;product=phosphoglycerate dehydrogenase;protein_id=WP_104052183.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	13410	14534	.	-	.	ID=gene-CYJ03_RS04055;Name=CYJ03_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04055;old_locus_tag=CYJ03_004045
NZ_PJUP02000008.1	Protein Homology	CDS	13410	14534	.	-	0	ID=cds-WP_101457381.1;Parent=gene-CYJ03_RS04055;Dbxref=GenBank:WP_101457381.1;Name=WP_101457381.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=CYJ03_RS04055;product=HAD family hydrolase;protein_id=WP_101457381.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	14742	15359	.	-	.	ID=gene-CYJ03_RS04060;Name=CYJ03_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04060;old_locus_tag=CYJ03_004050
NZ_PJUP02000008.1	Protein Homology	CDS	14742	15359	.	-	0	ID=cds-WP_014613640.1;Parent=gene-CYJ03_RS04060;Dbxref=GenBank:WP_014613640.1;Name=WP_014613640.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165051.1;locus_tag=CYJ03_RS04060;product=lysophospholipid acyltransferase family protein;protein_id=WP_014613640.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	15514	16785	.	+	.	ID=gene-CYJ03_RS04065;Name=CYJ03_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04065;old_locus_tag=CYJ03_004055
NZ_PJUP02000008.1	Protein Homology	CDS	15514	16785	.	+	0	ID=cds-WP_020219646.1;Parent=gene-CYJ03_RS04065;Dbxref=GenBank:WP_020219646.1;Name=WP_020219646.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219646.1;locus_tag=CYJ03_RS04065;product=S1C family serine protease;protein_id=WP_020219646.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	16839	18101	.	-	.	ID=gene-CYJ03_RS04070;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04070;old_locus_tag=CYJ03_004060
NZ_PJUP02000008.1	Protein Homology	CDS	16839	18101	.	-	0	ID=cds-WP_014613638.1;Parent=gene-CYJ03_RS04070;Dbxref=GenBank:WP_014613638.1;Name=WP_014613638.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=CYJ03_RS04070;product=tyrosine--tRNA ligase;protein_id=WP_014613638.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	18447	19346	.	+	.	ID=gene-CYJ03_RS04075;Name=CYJ03_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04075;old_locus_tag=CYJ03_004065
NZ_PJUP02000008.1	Protein Homology	CDS	18447	19346	.	+	0	ID=cds-WP_015729323.1;Parent=gene-CYJ03_RS04075;Dbxref=GenBank:WP_015729323.1;Name=WP_015729323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729323.1;locus_tag=CYJ03_RS04075;product=biosynthetic peptidoglycan transglycosylase;protein_id=WP_015729323.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	19421	21088	.	-	.	ID=gene-CYJ03_RS04080;Name=CYJ03_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04080;old_locus_tag=CYJ03_004070
NZ_PJUP02000008.1	Protein Homology	CDS	19421	21088	.	-	0	ID=cds-WP_015729324.1;Parent=gene-CYJ03_RS04080;Dbxref=GenBank:WP_015729324.1;Name=WP_015729324.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CYJ03_RS04080;product=formate--tetrahydrofolate ligase;protein_id=WP_015729324.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	21404	23113	.	-	.	ID=gene-CYJ03_RS04085;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04085;old_locus_tag=CYJ03_004075
NZ_PJUP02000008.1	Protein Homology	CDS	21404	23113	.	-	0	ID=cds-WP_014613635.1;Parent=gene-CYJ03_RS04085;Dbxref=GenBank:WP_014613635.1;Name=WP_014613635.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=CYJ03_RS04085;product=acetate--CoA ligase;protein_id=WP_014613635.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	23280	23912	.	+	.	ID=gene-CYJ03_RS04090;Name=CYJ03_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04090;old_locus_tag=CYJ03_004080
NZ_PJUP02000008.1	Protein Homology	CDS	23280	23912	.	+	0	ID=cds-WP_015729326.1;Parent=gene-CYJ03_RS04090;Dbxref=GenBank:WP_015729326.1;Name=WP_015729326.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=CYJ03_RS04090;product=GNAT family N-acetyltransferase;protein_id=WP_015729326.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	23926	25083	.	+	.	ID=gene-CYJ03_RS04095;Name=CYJ03_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04095;old_locus_tag=CYJ03_004085
NZ_PJUP02000008.1	Protein Homology	CDS	23926	25083	.	+	0	ID=cds-WP_014613633.1;Parent=gene-CYJ03_RS04095;Dbxref=GenBank:WP_014613633.1;Name=WP_014613633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165044.1;locus_tag=CYJ03_RS04095;product=acetoin utilization protein AcuC;protein_id=WP_014613633.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	25202	26191	.	-	.	ID=gene-CYJ03_RS04100;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04100;old_locus_tag=CYJ03_004090
NZ_PJUP02000008.1	Protein Homology	CDS	25202	26191	.	-	0	ID=cds-WP_014613632.1;Parent=gene-CYJ03_RS04100;Dbxref=GenBank:WP_014613632.1;Name=WP_014613632.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503626.1;locus_tag=CYJ03_RS04100;product=catabolite control protein A;protein_id=WP_014613632.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	26599	27690	.	-	.	ID=gene-CYJ03_RS04105;Name=CYJ03_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04105;old_locus_tag=CYJ03_004095
NZ_PJUP02000008.1	Protein Homology	CDS	26599	27690	.	-	0	ID=cds-WP_014613631.1;Parent=gene-CYJ03_RS04105;Dbxref=GenBank:WP_014613631.1;Name=WP_014613631.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=CYJ03_RS04105;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_014613631.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	28010	29107	.	-	.	ID=gene-CYJ03_RS04110;Name=CYJ03_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04110;old_locus_tag=CYJ03_004100
NZ_PJUP02000008.1	Protein Homology	CDS	28010	29107	.	-	0	ID=cds-WP_100040088.1;Parent=gene-CYJ03_RS04110;Dbxref=GenBank:WP_100040088.1;Name=WP_100040088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729328.1;locus_tag=CYJ03_RS04110;product=hypothetical protein;protein_id=WP_100040088.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	29203	29811	.	-	.	ID=gene-CYJ03_RS04115;Name=CYJ03_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04115;old_locus_tag=CYJ03_004105
NZ_PJUP02000008.1	Protein Homology	CDS	29203	29811	.	-	0	ID=cds-WP_104052184.1;Parent=gene-CYJ03_RS04115;Dbxref=GenBank:WP_104052184.1;Name=WP_104052184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434851.1;locus_tag=CYJ03_RS04115;product=DUF948 domain-containing protein;protein_id=WP_104052184.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	29890	31203	.	-	.	ID=gene-CYJ03_RS04120;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04120;old_locus_tag=CYJ03_004110
NZ_PJUP02000008.1	Protein Homology	CDS	29890	31203	.	-	0	ID=cds-WP_014613628.1;Parent=gene-CYJ03_RS04120;Dbxref=GenBank:WP_014613628.1;Name=WP_014613628.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484970.1;locus_tag=CYJ03_RS04120;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014613628.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	31232	34474	.	-	.	ID=gene-CYJ03_RS04125;Name=CYJ03_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04125;old_locus_tag=CYJ03_004115
NZ_PJUP02000008.1	Protein Homology	CDS	31232	34474	.	-	0	ID=cds-WP_104052185.1;Parent=gene-CYJ03_RS04125;Dbxref=GenBank:WP_104052185.1;Name=WP_104052185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=CYJ03_RS04125;product=DNA translocase FtsK;protein_id=WP_104052185.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	34494	35093	.	-	.	ID=gene-CYJ03_RS04130;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=CYJ03_RS04130;old_locus_tag=CYJ03_004120
NZ_PJUP02000008.1	Protein Homology	CDS	34494	35093	.	-	0	ID=cds-WP_070407623.1;Parent=gene-CYJ03_RS04130;Dbxref=GenBank:WP_070407623.1;Name=WP_070407623.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=CYJ03_RS04130;product=YtpR family tRNA-binding protein;protein_id=WP_070407623.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	35099	35965	.	-	.	ID=gene-CYJ03_RS04135;Name=CYJ03_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04135;old_locus_tag=CYJ03_004125
NZ_PJUP02000008.1	Protein Homology	CDS	35099	35965	.	-	0	ID=cds-WP_014613625.1;Parent=gene-CYJ03_RS04135;Dbxref=GenBank:WP_014613625.1;Name=WP_014613625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=CYJ03_RS04135;product=DUF1444 domain-containing protein;protein_id=WP_014613625.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	36058	36366	.	-	.	ID=gene-CYJ03_RS04140;Name=CYJ03_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04140;old_locus_tag=CYJ03_004130
NZ_PJUP02000008.1	Protein Homology	CDS	36058	36366	.	-	0	ID=cds-WP_014613624.1;Parent=gene-CYJ03_RS04140;Dbxref=GenBank:WP_014613624.1;Name=WP_014613624.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168411.1;locus_tag=CYJ03_RS04140;product=thioredoxin family protein;protein_id=WP_014613624.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	36378	37445	.	-	.	ID=gene-CYJ03_RS04145;Name=CYJ03_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04145;old_locus_tag=CYJ03_004135
NZ_PJUP02000008.1	Protein Homology	CDS	36378	37445	.	-	0	ID=cds-WP_070407624.1;Parent=gene-CYJ03_RS04145;Dbxref=GenBank:WP_070407624.1;Name=WP_070407624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613623.1;locus_tag=CYJ03_RS04145;product=M42 family metallopeptidase;protein_id=WP_070407624.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	37541	37858	.	+	.	ID=gene-CYJ03_RS04150;Name=CYJ03_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04150;old_locus_tag=CYJ03_004140
NZ_PJUP02000008.1	Protein Homology	CDS	37541	37858	.	+	0	ID=cds-WP_014613622.1;Parent=gene-CYJ03_RS04150;Dbxref=GenBank:WP_014613622.1;Name=WP_014613622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=CYJ03_RS04150;product=hypothetical protein;protein_id=WP_014613622.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	37925	38758	.	-	.	ID=gene-CYJ03_RS04155;Name=CYJ03_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04155;old_locus_tag=CYJ03_004145
NZ_PJUP02000008.1	Protein Homology	CDS	37925	38758	.	-	0	ID=cds-WP_014613621.1;Parent=gene-CYJ03_RS04155;Dbxref=GenBank:WP_014613621.1;Name=WP_014613621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613621.1;locus_tag=CYJ03_RS04155;product=YtnP family quorum-quenching lactonase;protein_id=WP_014613621.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	39030	39683	.	-	.	ID=gene-CYJ03_RS04160;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04160;old_locus_tag=CYJ03_004150
NZ_PJUP02000008.1	Protein Homology	CDS	39030	39683	.	-	0	ID=cds-WP_015729335.1;Parent=gene-CYJ03_RS04160;Dbxref=GenBank:WP_015729335.1;Name=WP_015729335.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729335.1;locus_tag=CYJ03_RS04160;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_015729335.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	39699	40490	.	-	.	ID=gene-CYJ03_RS04165;Name=CYJ03_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04165;old_locus_tag=CYJ03_004155
NZ_PJUP02000008.1	Protein Homology	CDS	39699	40490	.	-	0	ID=cds-WP_014613619.1;Parent=gene-CYJ03_RS04165;Dbxref=GenBank:WP_014613619.1;Name=WP_014613619.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=CYJ03_RS04165;product=phosphotransferase family protein;protein_id=WP_014613619.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	40723	41571	.	-	.	ID=gene-CYJ03_RS04170;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CYJ03_RS04170;old_locus_tag=CYJ03_004160
NZ_PJUP02000008.1	Protein Homology	CDS	40723	41571	.	-	0	ID=cds-WP_014613618.1;Parent=gene-CYJ03_RS04170;Dbxref=GenBank:WP_014613618.1;Name=WP_014613618.1;Ontology_term=GO:0042853,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613618.1;locus_tag=CYJ03_RS04170;product=D-amino-acid transaminase;protein_id=WP_014613618.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	41575	42984	.	-	.	ID=gene-CYJ03_RS04175;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=CYJ03_RS04175;old_locus_tag=CYJ03_004165
NZ_PJUP02000008.1	Protein Homology	CDS	41575	42984	.	-	0	ID=cds-WP_014613617.1;Parent=gene-CYJ03_RS04175;Dbxref=GenBank:WP_014613617.1;Name=WP_014613617.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=CYJ03_RS04175;product=dipeptidase PepV;protein_id=WP_014613617.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	43307	43705	.	-	.	ID=gene-CYJ03_RS04180;Name=CYJ03_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04180;old_locus_tag=CYJ03_004170
NZ_PJUP02000008.1	Protein Homology	CDS	43307	43705	.	-	0	ID=cds-WP_014613615.1;Parent=gene-CYJ03_RS04180;Dbxref=GenBank:WP_014613615.1;Name=WP_014613615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168403.1;locus_tag=CYJ03_RS04180;product=YtxH domain-containing protein;protein_id=WP_014613615.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	43789	44487	.	-	.	ID=gene-CYJ03_RS04185;Name=CYJ03_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04185;old_locus_tag=CYJ03_004175
NZ_PJUP02000008.1	Protein Homology	CDS	43789	44487	.	-	0	ID=cds-WP_014613614.1;Parent=gene-CYJ03_RS04185;Dbxref=GenBank:WP_014613614.1;Name=WP_014613614.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165027.1;locus_tag=CYJ03_RS04185;product=pseudouridine synthase;protein_id=WP_014613614.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	44487	46121	.	-	.	ID=gene-CYJ03_RS04190;Name=CYJ03_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04190;old_locus_tag=CYJ03_004180
NZ_PJUP02000008.1	Protein Homology	CDS	44487	46121	.	-	0	ID=cds-WP_015729337.1;Parent=gene-CYJ03_RS04190;Dbxref=GenBank:WP_015729337.1;Name=WP_015729337.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168401.1;locus_tag=CYJ03_RS04190;product=putative polysaccharide biosynthesis protein;protein_id=WP_015729337.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	46238	47494	.	+	.	ID=gene-CYJ03_RS04195;Name=CYJ03_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04195;old_locus_tag=CYJ03_004185
NZ_PJUP02000008.1	Protein Homology	CDS	46238	47494	.	+	0	ID=cds-WP_063278942.1;Parent=gene-CYJ03_RS04195;Dbxref=GenBank:WP_063278942.1;Name=WP_063278942.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613612.1;locus_tag=CYJ03_RS04195;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063278942.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	48124	48435	.	-	.	ID=gene-CYJ03_RS04200;Name=CYJ03_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04200;old_locus_tag=CYJ03_004190
NZ_PJUP02000008.1	Protein Homology	CDS	48124	48435	.	-	0	ID=cds-WP_015729339.1;Parent=gene-CYJ03_RS04200;Dbxref=GenBank:WP_015729339.1;Name=WP_015729339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187674.1;locus_tag=CYJ03_RS04200;product=rhodanese-like domain-containing protein;protein_id=WP_015729339.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	48462	50876	.	-	.	ID=gene-CYJ03_RS04205;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CYJ03_RS04205;old_locus_tag=CYJ03_004195
NZ_PJUP02000008.1	Protein Homology	CDS	48462	50876	.	-	0	ID=cds-WP_181137779.1;Parent=gene-CYJ03_RS04205;Dbxref=GenBank:WP_181137779.1;Name=WP_181137779.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=CYJ03_RS04205;product=leucine--tRNA ligase;protein_id=WP_181137779.1;transl_table=11
NZ_PJUP02000008.1	cmsearch	binding_site	50924	51115	.	-	.	ID=id-NZ_PJUP02000008.1:50924..51115;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_PJUP02000008.1	RefSeq	gene	51185	52366	.	-	.	ID=gene-CYJ03_RS04210;Name=CYJ03_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04210;old_locus_tag=CYJ03_004200
NZ_PJUP02000008.1	Protein Homology	CDS	51185	52366	.	-	0	ID=cds-WP_015729341.1;Parent=gene-CYJ03_RS04210;Dbxref=GenBank:WP_015729341.1;Name=WP_015729341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729341.1;locus_tag=CYJ03_RS04210;product=MDR family MFS transporter;protein_id=WP_015729341.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	52514	53467	.	+	.	ID=gene-CYJ03_RS04215;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CYJ03_RS04215;old_locus_tag=CYJ03_004205
NZ_PJUP02000008.1	Protein Homology	CDS	52514	53467	.	+	0	ID=cds-WP_014613608.1;Parent=gene-CYJ03_RS04215;Dbxref=GenBank:WP_014613608.1;Name=WP_014613608.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613608.1;locus_tag=CYJ03_RS04215;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_014613608.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	53464	54027	.	+	.	ID=gene-CYJ03_RS04220;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=CYJ03_RS04220;old_locus_tag=CYJ03_004210
NZ_PJUP02000008.1	Protein Homology	CDS	53464	54027	.	+	0	ID=cds-WP_014613607.1;Parent=gene-CYJ03_RS04220;Dbxref=GenBank:WP_014613607.1;Name=WP_014613607.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=CYJ03_RS04220;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_014613607.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	54530	54940	.	-	.	ID=gene-CYJ03_RS04225;Name=CYJ03_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04225;old_locus_tag=CYJ03_004215
NZ_PJUP02000008.1	Protein Homology	CDS	54530	54940	.	-	0	ID=cds-WP_014613606.1;Parent=gene-CYJ03_RS04225;Dbxref=GenBank:WP_014613606.1;Name=WP_014613606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613606.1;locus_tag=CYJ03_RS04225;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_014613606.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	55207	56157	.	-	.	ID=gene-CYJ03_RS04230;Name=CYJ03_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04230;old_locus_tag=CYJ03_004220
NZ_PJUP02000008.1	Protein Homology	CDS	55207	56157	.	-	0	ID=cds-WP_014613605.1;Parent=gene-CYJ03_RS04230;Dbxref=GenBank:WP_014613605.1;Name=WP_014613605.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613605.1;locus_tag=CYJ03_RS04230;product=L-lactate dehydrogenase;protein_id=WP_014613605.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	56318	57142	.	-	.	ID=gene-CYJ03_RS04235;Name=CYJ03_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04235;old_locus_tag=CYJ03_004225
NZ_PJUP02000008.1	Protein Homology	CDS	56318	57142	.	-	0	ID=cds-WP_014613604.1;Parent=gene-CYJ03_RS04235;Dbxref=GenBank:WP_014613604.1;Name=WP_014613604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=CYJ03_RS04235;product=alpha/beta fold hydrolase;protein_id=WP_014613604.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	57285	57617	.	-	.	ID=gene-CYJ03_RS04240;Name=CYJ03_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04240;old_locus_tag=CYJ03_004230
NZ_PJUP02000008.1	Protein Homology	CDS	57285	57617	.	-	0	ID=cds-WP_104052186.1;Parent=gene-CYJ03_RS04240;Dbxref=GenBank:WP_104052186.1;Name=WP_104052186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168390.1;locus_tag=CYJ03_RS04240;product=hypothetical protein;protein_id=WP_104052186.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	58103	59089	.	+	.	ID=gene-CYJ03_RS04245;Name=CYJ03_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04245;old_locus_tag=CYJ03_004235
NZ_PJUP02000008.1	Protein Homology	CDS	58103	59089	.	+	0	ID=cds-WP_096536547.1;Parent=gene-CYJ03_RS04245;Dbxref=GenBank:WP_096536547.1;Name=WP_096536547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613601.1;locus_tag=CYJ03_RS04245;product=proline dehydrogenase family protein;protein_id=WP_096536547.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	59214	59678	.	-	.	ID=gene-CYJ03_RS04250;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CYJ03_RS04250;old_locus_tag=CYJ03_004240
NZ_PJUP02000008.1	Protein Homology	CDS	59214	59678	.	-	0	ID=cds-WP_031253731.1;Parent=gene-CYJ03_RS04250;Dbxref=GenBank:WP_031253731.1;Name=WP_031253731.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500388.1;locus_tag=CYJ03_RS04250;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_031253731.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	59696	60877	.	-	.	ID=gene-CYJ03_RS04255;Name=CYJ03_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04255;old_locus_tag=CYJ03_004245
NZ_PJUP02000008.1	Protein Homology	CDS	59696	60877	.	-	0	ID=cds-WP_014613599.1;Parent=gene-CYJ03_RS04255;Dbxref=GenBank:WP_014613599.1;Name=WP_014613599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=CYJ03_RS04255;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_014613599.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	60891	61520	.	-	.	ID=gene-CYJ03_RS04260;Name=CYJ03_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04260;old_locus_tag=CYJ03_004250
NZ_PJUP02000008.1	Protein Homology	CDS	60891	61520	.	-	0	ID=cds-WP_103863193.1;Parent=gene-CYJ03_RS04260;Dbxref=GenBank:WP_103863193.1;Name=WP_103863193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=CYJ03_RS04260;product=riboflavin synthase;protein_id=WP_103863193.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	61525	62571	.	-	.	ID=gene-CYJ03_RS04265;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04265;old_locus_tag=CYJ03_004255
NZ_PJUP02000008.1	Protein Homology	CDS	61525	62571	.	-	0	ID=cds-WP_014613597.1;Parent=gene-CYJ03_RS04265;Dbxref=GenBank:WP_014613597.1;Name=WP_014613597.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=CYJ03_RS04265;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_014613597.1;transl_table=11
NZ_PJUP02000008.1	cmsearch	riboswitch	62717	62851	.	-	.	ID=id-NZ_PJUP02000008.1:62717..62851;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000008.1	RefSeq	gene	63028	64581	.	-	.	ID=gene-CYJ03_RS04270;Name=CYJ03_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04270;old_locus_tag=CYJ03_004260
NZ_PJUP02000008.1	Protein Homology	CDS	63028	64581	.	-	0	ID=cds-WP_015729344.1;Parent=gene-CYJ03_RS04270;Dbxref=GenBank:WP_015729344.1;Name=WP_015729344.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729344.1;locus_tag=CYJ03_RS04270;product=FAD/NAD(P)-binding protein;protein_id=WP_015729344.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	64970	65833	.	-	.	ID=gene-CYJ03_RS04275;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04275;old_locus_tag=CYJ03_004265
NZ_PJUP02000008.1	Protein Homology	CDS	64970	65833	.	-	0	ID=cds-WP_014613595.1;Parent=gene-CYJ03_RS04275;Dbxref=GenBank:WP_014613595.1;Name=WP_014613595.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=CYJ03_RS04275;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_014613595.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	65990	66214	.	-	.	ID=gene-CYJ03_RS04280;Name=CYJ03_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04280;old_locus_tag=CYJ03_004270
NZ_PJUP02000008.1	Protein Homology	CDS	65990	66214	.	-	0	ID=cds-WP_014613594.1;Parent=gene-CYJ03_RS04280;Dbxref=GenBank:WP_014613594.1;Name=WP_014613594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500397.1;locus_tag=CYJ03_RS04280;product=hypothetical protein;protein_id=WP_014613594.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	66346	66900	.	+	.	ID=gene-CYJ03_RS04285;Name=CYJ03_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04285;old_locus_tag=CYJ03_004275
NZ_PJUP02000008.1	Protein Homology	CDS	66346	66900	.	+	0	ID=cds-WP_172426177.1;Parent=gene-CYJ03_RS04285;Dbxref=GenBank:WP_172426177.1;Name=WP_172426177.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425400.1;locus_tag=CYJ03_RS04285;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_172426177.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	66903	67334	.	+	.	ID=gene-CYJ03_RS04290;Name=CYJ03_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04290;old_locus_tag=CYJ03_004280
NZ_PJUP02000008.1	Protein Homology	CDS	66903	67334	.	+	0	ID=cds-WP_014613592.1;Parent=gene-CYJ03_RS04290;Dbxref=GenBank:WP_014613592.1;Name=WP_014613592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165954.1;locus_tag=CYJ03_RS04290;product=competence protein ComK;protein_id=WP_014613592.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	67337	67786	.	-	.	ID=gene-CYJ03_RS04295;Name=CYJ03_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04295;old_locus_tag=CYJ03_004285
NZ_PJUP02000008.1	Protein Homology	CDS	67337	67786	.	-	0	ID=cds-WP_014613591.1;Parent=gene-CYJ03_RS04295;Dbxref=GenBank:WP_014613591.1;Name=WP_014613591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165953.1;locus_tag=CYJ03_RS04295;product=hypothetical protein;protein_id=WP_014613591.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	67953	68663	.	-	.	ID=gene-CYJ03_RS04300;Name=CYJ03_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04300;old_locus_tag=CYJ03_004290
NZ_PJUP02000008.1	Protein Homology	CDS	67953	68663	.	-	0	ID=cds-WP_014613590.1;Parent=gene-CYJ03_RS04300;Dbxref=GenBank:WP_014613590.1;Name=WP_014613590.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CYJ03_RS04300;product=transaldolase;protein_id=WP_014613590.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	68816	69118	.	+	.	ID=gene-CYJ03_RS04305;Name=CYJ03_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04305;old_locus_tag=CYJ03_004295
NZ_PJUP02000008.1	Protein Homology	CDS	68816	69118	.	+	0	ID=cds-WP_014613589.1;Parent=gene-CYJ03_RS04305;Dbxref=GenBank:WP_014613589.1;Name=WP_014613589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=CYJ03_RS04305;product=hypothetical protein;protein_id=WP_014613589.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	69151	69516	.	+	.	ID=gene-CYJ03_RS04310;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04310;old_locus_tag=CYJ03_004300
NZ_PJUP02000008.1	Protein Homology	CDS	69151	69516	.	+	0	ID=cds-WP_014613588.1;Parent=gene-CYJ03_RS04310;Dbxref=GenBank:WP_014613588.1;Name=WP_014613588.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613588.1;locus_tag=CYJ03_RS04310;product=fluoride efflux transporter CrcB;protein_id=WP_014613588.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	69513	69860	.	+	.	ID=gene-CYJ03_RS04315;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CYJ03_RS04315;old_locus_tag=CYJ03_004305
NZ_PJUP02000008.1	Protein Homology	CDS	69513	69860	.	+	0	ID=cds-WP_020219661.1;Parent=gene-CYJ03_RS04315;Dbxref=GenBank:WP_020219661.1;Name=WP_020219661.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219661.1;locus_tag=CYJ03_RS04315;product=fluoride efflux transporter CrcB;protein_id=WP_020219661.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	69962	70798	.	-	.	ID=gene-CYJ03_RS04320;Name=CYJ03_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04320;old_locus_tag=CYJ03_004310
NZ_PJUP02000008.1	Protein Homology	CDS	69962	70798	.	-	0	ID=cds-WP_063284448.1;Parent=gene-CYJ03_RS04320;Dbxref=GenBank:WP_063284448.1;Name=WP_063284448.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=CYJ03_RS04320;product=aldo/keto reductase;protein_id=WP_063284448.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	70940	71851	.	-	.	ID=gene-CYJ03_RS04325;Name=CYJ03_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04325;old_locus_tag=CYJ03_004315
NZ_PJUP02000008.1	Protein Homology	CDS	70940	71851	.	-	0	ID=cds-WP_014613585.1;Parent=gene-CYJ03_RS04325;Dbxref=GenBank:WP_014613585.1;Name=WP_014613585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219663.1;locus_tag=CYJ03_RS04325;product=NERD domain-containing protein;protein_id=WP_014613585.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	71939	73138	.	-	.	ID=gene-CYJ03_RS04330;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CYJ03_RS04330;old_locus_tag=CYJ03_004320
NZ_PJUP02000008.1	Protein Homology	CDS	71939	73138	.	-	0	ID=cds-WP_014613584.1;Parent=gene-CYJ03_RS04330;Dbxref=GenBank:WP_014613584.1;Name=WP_014613584.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=CYJ03_RS04330;product=methionine adenosyltransferase;protein_id=WP_014613584.1;transl_table=11
NZ_PJUP02000008.1	cmsearch	riboswitch	73243	73354	.	-	.	ID=id-NZ_PJUP02000008.1:73243..73354;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PJUP02000008.1	RefSeq	gene	73602	75182	.	+	.	ID=gene-CYJ03_RS04335;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CYJ03_RS04335;old_locus_tag=CYJ03_004325
NZ_PJUP02000008.1	Protein Homology	CDS	73602	75182	.	+	0	ID=cds-WP_014613583.1;Parent=gene-CYJ03_RS04335;Dbxref=GenBank:WP_014613583.1;Name=WP_014613583.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=CYJ03_RS04335;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014613583.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	75580	76356	.	-	.	ID=gene-CYJ03_RS04340;Name=CYJ03_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04340;old_locus_tag=CYJ03_004330
NZ_PJUP02000008.1	Protein Homology	CDS	75580	76356	.	-	0	ID=cds-WP_041613219.1;Parent=gene-CYJ03_RS04340;Dbxref=GenBank:WP_041613219.1;Name=WP_041613219.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219665.1;locus_tag=CYJ03_RS04340;product=alpha/beta hydrolase family protein;protein_id=WP_041613219.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	76337	76807	.	-	.	ID=gene-CYJ03_RS04345;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04345;old_locus_tag=CYJ03_004335
NZ_PJUP02000008.1	Protein Homology	CDS	76337	76807	.	-	0	ID=cds-WP_014613581.1;Parent=gene-CYJ03_RS04345;Dbxref=GenBank:WP_014613581.1;Name=WP_014613581.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=CYJ03_RS04345;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_014613581.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	76866	77117	.	+	.	ID=gene-CYJ03_RS04350;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04350;old_locus_tag=CYJ03_004340
NZ_PJUP02000008.1	Protein Homology	CDS	76866	77117	.	+	0	ID=cds-WP_014613580.1;Parent=gene-CYJ03_RS04350;Dbxref=GenBank:WP_014613580.1;Name=WP_014613580.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=CYJ03_RS04350;product=membrane protein insertion efficiency factor YidD;protein_id=WP_014613580.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	77093	78079	.	-	.	ID=gene-CYJ03_RS04355;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CYJ03_RS04355;old_locus_tag=CYJ03_004345
NZ_PJUP02000008.1	Protein Homology	CDS	77093	78079	.	-	0	ID=cds-WP_014613579.1;Parent=gene-CYJ03_RS04355;Dbxref=GenBank:WP_014613579.1;Name=WP_014613579.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=CYJ03_RS04355;product=o-succinylbenzoate synthase;protein_id=WP_014613579.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	78082	79485	.	-	.	ID=gene-CYJ03_RS04360;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CYJ03_RS04360;old_locus_tag=CYJ03_004350
NZ_PJUP02000008.1	Protein Homology	CDS	78082	79485	.	-	0	ID=cds-WP_014613578.1;Parent=gene-CYJ03_RS04360;Dbxref=GenBank:WP_014613578.1;Name=WP_014613578.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641589.1;locus_tag=CYJ03_RS04360;product=o-succinylbenzoate--CoA ligase;protein_id=WP_014613578.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	79660	81294	.	-	.	ID=gene-CYJ03_RS04365;Name=CYJ03_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04365;old_locus_tag=CYJ03_004355
NZ_PJUP02000008.1	Protein Homology	CDS	79660	81294	.	-	0	ID=cds-WP_101431483.1;Parent=gene-CYJ03_RS04365;Dbxref=GenBank:WP_101431483.1;Name=WP_101431483.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165938.1;locus_tag=CYJ03_RS04365;product=BglG family transcription antiterminator;protein_id=WP_101431483.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	81358	82053	.	-	.	ID=gene-CYJ03_RS04370;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CYJ03_RS04370;old_locus_tag=CYJ03_004360
NZ_PJUP02000008.1	Protein Homology	CDS	81358	82053	.	-	0	ID=cds-WP_014613576.1;Parent=gene-CYJ03_RS04370;Dbxref=GenBank:WP_014613576.1;Name=WP_014613576.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219668.1;locus_tag=CYJ03_RS04370;product=L-ribulose-5-phosphate 4-epimerase AraD;protein_id=WP_014613576.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	82046	82909	.	-	.	ID=gene-CYJ03_RS04375;Name=CYJ03_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04375;old_locus_tag=CYJ03_004365
NZ_PJUP02000008.1	Protein Homology	CDS	82046	82909	.	-	0	ID=cds-WP_015729351.1;Parent=gene-CYJ03_RS04375;Dbxref=GenBank:WP_015729351.1;Name=WP_015729351.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729351.1;locus_tag=CYJ03_RS04375;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_015729351.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	82909	83547	.	-	.	ID=gene-CYJ03_RS04380;Name=CYJ03_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04380;old_locus_tag=CYJ03_004370
NZ_PJUP02000008.1	Protein Homology	CDS	82909	83547	.	-	0	ID=cds-WP_063284452.1;Parent=gene-CYJ03_RS04380;Dbxref=GenBank:WP_063284452.1;Name=WP_063284452.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729352.1;locus_tag=CYJ03_RS04380;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_063284452.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	83564	84031	.	-	.	ID=gene-CYJ03_RS04385;Name=CYJ03_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04385;old_locus_tag=CYJ03_004375
NZ_PJUP02000008.1	Protein Homology	CDS	83564	84031	.	-	0	ID=cds-WP_014613573.1;Parent=gene-CYJ03_RS04385;Dbxref=GenBank:WP_014613573.1;Name=WP_014613573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165934.1;locus_tag=CYJ03_RS04385;product=PTS sugar transporter subunit IIA;protein_id=WP_014613573.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	84044	84322	.	-	.	ID=gene-CYJ03_RS04390;Name=CYJ03_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04390;old_locus_tag=CYJ03_004380
NZ_PJUP02000008.1	Protein Homology	CDS	84044	84322	.	-	0	ID=cds-WP_014613572.1;Parent=gene-CYJ03_RS04390;Dbxref=GenBank:WP_014613572.1;Name=WP_014613572.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613572.1;locus_tag=CYJ03_RS04390;product=PTS sugar transporter subunit IIB;protein_id=WP_014613572.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	84346	85773	.	-	.	ID=gene-CYJ03_RS04395;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CYJ03_RS04395;old_locus_tag=CYJ03_004385
NZ_PJUP02000008.1	Protein Homology	CDS	84346	85773	.	-	0	ID=cds-WP_014613571.1;Parent=gene-CYJ03_RS04395;Dbxref=GenBank:WP_014613571.1;Name=WP_014613571.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613571.1;locus_tag=CYJ03_RS04395;product=PTS ascorbate transporter subunit IIC;protein_id=WP_014613571.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	85801	86871	.	-	.	ID=gene-CYJ03_RS04400;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CYJ03_RS04400;old_locus_tag=CYJ03_004390
NZ_PJUP02000008.1	Protein Homology	CDS	85801	86871	.	-	0	ID=cds-WP_014613570.1;Parent=gene-CYJ03_RS04400;Dbxref=GenBank:WP_014613570.1;Name=WP_014613570.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613570.1;locus_tag=CYJ03_RS04400;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_014613570.1;transl_table=11
NZ_PJUP02000008.1	RefSeq	gene	87013	87561	.	-	.	ID=gene-CYJ03_RS04405;Name=CYJ03_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CYJ03_RS04405;old_locus_tag=CYJ03_004395
NZ_PJUP02000008.1	Protein Homology	CDS	87013	87561	.	-	0	ID=cds-WP_065354152.1;Parent=gene-CYJ03_RS04405;Dbxref=GenBank:WP_065354152.1;Name=WP_065354152.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613569.1;locus_tag=CYJ03_RS04405;product=histidine phosphatase family protein;protein_id=WP_065354152.1;transl_table=11
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